Citrus Sinensis ID: 018618

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350---
Protein Sequence
MEFSSEANQRIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccEEEEcccccccHHHHHHHHHcccccEEEEEEccccccHHHHcccccccccEEEEcccccHHHHHccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHcccccccEEEEcccHHHHHHHHHHHHHcccccccEEEEEccccccccccccccccccccccHHHHHHHHHHHcccccHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccEEEEEEEEcccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccEEEEEccccccHHHHHHHHHHcccccEEEEEEcccHHHHHHHHcccccccEEEEEEcHHHHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHHHccccccccEEEccHHHHHHHHHHHHHHccccHHHcEccEEEcccHHHEEEcHHHcEccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEcccccccEEEEEEEEEccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MEFSSEANQRIARISahlyppnlqnscLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYdvvntpgvtadishmdtgavvrgflgqpqlenaltgmdlviipagvprkpgmtrddlfnINAGIVRTLCEGIakccpnatvnlisnpvnstvPIAAEVFkkagtydpkkllGVTMLDVVRANTFVAEVlgldprdvdvpvvgghagvtilpllsqvkppcsftqEETEYLTNRIQNGGTEVVeakagagsaTLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEeifqlgplneyerIGLEKAKKELAGSIQkgisfskk
Flexible Loop (DISEMBL)
MEFSSEANQRIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEvlgldprdvdvpVVGGHAGVTilpllsqvkpPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEifqlgplneYERIGLEKAKKElagsiqkgisfskk
Low Complexity Region (SEG)
MEFSSEANQRIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEvlgldprdvdvpvvggHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Disordered region (IsUnstruct)
************RISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL********************
Disordered Region (DISOPRED)
*******************************************VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Disordered Region (DISEMBL)
*********RIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Disordered Region (DISPRO)
**************************************AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEFSSEANQRIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	353	2.2.26 [Sep-21-2011]
P19446	356	Malate dehydrogenase, gly	N/A	no	0.991	0.983	0.883	0.0
P46488	356	Malate dehydrogenase, gly	N/A	no	0.997	0.988	0.876	1e-180
O82399	354	Probable malate dehydroge	yes	no	0.985	0.983	0.849	1e-174
P37228	353	Malate dehydrogenase, gly	yes	no	1.0	1.0	0.835	1e-173
Q42972	356	Malate dehydrogenase, gly	yes	no	1.0	0.991	0.848	1e-173
Q9ZP05	354	Malate dehydrogenase, gly	no	no	1.0	0.997	0.853	1e-169
Q9XFW3	358	Malate dehydrogenase 2, g	N/A	no	1.0	0.986	0.837	1e-167
Q43743	358	Malate dehydrogenase 1, g	N/A	no	1.0	0.986	0.837	1e-166
P17783	347	Malate dehydrogenase, mit	N/A	no	0.875	0.890	0.676	1e-117
Q9ZP06	341	Malate dehydrogenase 1, m	no	no	0.881	0.912	0.662	1e-117

>sp|P19446|MDHG_CITLA Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1

 Score =  635 bits (1637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 312/353 (88%), Positives = 329/353 (93%), Gaps = 3/353 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           M+   + NQRIARISAHL+PP  Q   +S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 120

Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 237
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQ 240

Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+S
Sbjct: 241 EEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSS 300

Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
           QVTELPFFASKVRLGR G EE++ LGPLNEYERIGLEKAKKELAGSI+KG+SF
Sbjct: 301 QVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSF 353

Citrullus lanatus (taxid: 3654)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 7

>sp|P46488|MDHG_CUCSA Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1

 Score =  631 bits (1628), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 311/355 (87%), Positives = 330/355 (92%), Gaps = 3/355 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           M+   + NQRIARISAHL+PP  Q   +S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKYQMEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDLV+IPA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPA 120

Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 237
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPRDV+VPVVGGHAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVNVPVVGGHAGVTILPLLSQVKPPSSFTQ 240

Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV+S
Sbjct: 241 EEINYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVSS 300

Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 352
           QVTELPFFA+KVRLGR G +E++ LGPLNEYERIGLEKAKKELAGSI+KG+SF +
Sbjct: 301 QVTELPFFATKVRLGRNGIDEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355

Cucumis sativus (taxid: 3659)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|O82399|MDHG2_ARATH Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1

 Score =  612 bits (1578), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 300/353 (84%), Positives = 323/353 (91%), Gaps = 5/353 (1%)

Query: 6   EANQRIARISAHLYPPNLQN-----SCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAML 60
           + NQRIARISAHL PPNL N     S L +  CRAKGG+ GFKVAILGAAGGIGQPLAML
Sbjct: 2   DPNQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAML 61

Query: 61  MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120
           MK+NPLVSVLHLYDV N PGVTADISHMDT AVVRGFLGQPQLE ALTGMDLVIIPAGVP
Sbjct: 62  MKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVP 121

Query: 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 180
           RKPGMTRDDLFNINAGIVRTL E IAKCCP A VN+ISNPVNSTVPIAAEVFKKAGT+DP
Sbjct: 122 RKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDP 181

Query: 181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET 240
           KKL+GVTMLDVVRANTFVAEV+ LDPR+V+VPVVGGHAGVTILPLLSQVKPPCSFTQ+E 
Sbjct: 182 KKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEI 241

Query: 241 EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT 300
           EYLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV+FADACLRGLRGDA +VECA+VAS VT
Sbjct: 242 EYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVT 301

Query: 301 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           ELPFFASKVRLGR G +E++ LGPLNEYER+GLEKAKKEL+ SI KG++F+KK
Sbjct: 302 ELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK 354

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P37228|MDHG_SOYBN Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2

 Score =  608 bits (1567), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 295/353 (83%), Positives = 322/353 (91%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAML 60
           ME +S A+ RI+RI+ HL P    + CL+++ CRAKGG +GFKVAILGAAGGIGQPLAML
Sbjct: 1   MEANSGASDRISRIAGHLRPQREDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAML 60

Query: 61  MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120
           MK+NPLVS+LHLYDVVNTPGVT+DISHMDTGAVVRGFLGQ QLE+AL GMDLVIIPAGVP
Sbjct: 61  MKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVP 120

Query: 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 180
           RKPGMTRDDLFNINAGIV+TLCE IAKCCP A VN+ISNPVNSTVPIAAEVFK+AGTYDP
Sbjct: 121 RKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNVISNPVNSTVPIAAEVFKRAGTYDP 180

Query: 181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET 240
           K+LLGVTMLDVVRANTFVAEVLG+DPRDVDVPVVGGHAG+TILPLLSQ+KPPCSFT +E 
Sbjct: 181 KRLLGVTMLDVVRANTFVAEVLGVDPRDVDVPVVGGHAGITILPLLSQIKPPCSFTPKEI 240

Query: 241 EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT 300
           EYLT RIQNGG EVVEAKAGAGSATLSMAYAAVKFADACL  LRGDAG++ECA+VASQVT
Sbjct: 241 EYLTGRIQNGGPEVVEAKAGAGSATLSMAYAAVKFADACLHALRGDAGIIECAYVASQVT 300

Query: 301 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           ELPFFASKVRLGR G EEI  LGPLN+YER  LEKAKKELA SI+KGISF +K
Sbjct: 301 ELPFFASKVRLGRVGVEEILPLGPLNDYERESLEKAKKELAASIEKGISFIRK 353

Glycine max (taxid: 3847)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q42972|MDHG_ORYSJ Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3

 Score =  606 bits (1563), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 302/356 (84%), Positives = 324/356 (91%), Gaps = 3/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           ME ++ A +R+ R+++HL PP  Q   +  LR + CRAKG A GFKVAILGA+GGIGQPL
Sbjct: 1   MEDAAAAARRMERLASHLRPPASQMEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPL 60

Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           A+LMK+NPLVSVLHLYDVVNTPGVTADISHM+TGAVVRGFLGQPQLENALTGMDLVIIPA
Sbjct: 61  ALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPA 120

Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA VN+ISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVISNPVNSTVPIAAEVFKKAGT 180

Query: 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 237
           YDPK+LLGVT LDVVRANTFVAEVLGLDPRDV+VPV+GGHAGVTILPLLSQV PPCSFT 
Sbjct: 181 YDPKRLLGVTTLDVVRANTFVAEVLGLDPRDVNVPVIGGHAGVTILPLLSQVNPPCSFTS 240

Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EE  YLT RIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDAG+VEC+FVAS
Sbjct: 241 EEISYLTTRIQNGGTEVVEAKAGAGSATLSMAYAASKFADACLRGLRGDAGIVECSFVAS 300

Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           QVTELPFFASKVRLGR G EEI  LGPLNE+ER GLEKAKKELA SIQKG++F  K
Sbjct: 301 QVTELPFFASKVRLGRCGIEEILSLGPLNEFERAGLEKAKKELAESIQKGVAFINK 356

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9ZP05|MDHG1_ARATH Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1

 Score =  593 bits (1530), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 302/354 (85%), Positives = 323/354 (91%), Gaps = 1/354 (0%)

Query: 1   MEFSSEANQRIARISAHLYPP-NLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAM 59
           MEF  +ANQRIARISAHL P    +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++
Sbjct: 1   MEFRGDANQRIARISAHLTPQMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSL 60

Query: 60  LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119
           LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAG+
Sbjct: 61  LMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGI 120

Query: 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 179
           PRKPGMTRDDLF INAGIV+TLCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYD
Sbjct: 121 PRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD 180

Query: 180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEE 239
           PKKLLGVT LDV RANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPP SFT +E
Sbjct: 181 PKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQE 240

Query: 240 TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 299
            EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA VVEC+FVASQV
Sbjct: 241 IEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQV 300

Query: 300 TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           TEL FFA+KVRLGR GAEE++QLGPLNEYERIGLEKAK ELAGSIQKG+ F +K
Sbjct: 301 TELAFFATKVRLGRTGAEEVYQLGPLNEYERIGLEKAKDELAGSIQKGVEFIRK 354

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9XFW3|MDHG2_BRANA Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1

 Score =  587 bits (1514), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 300/358 (83%), Positives = 323/358 (90%), Gaps = 5/358 (1%)

Query: 1   MEFSSEANQRIARISAHLYP---PNLQ--NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQ 55
           MEF  +AN+RIA ISAHL P   P ++  NS + +  CRAKGG  GFKVAILGAAGGIGQ
Sbjct: 1   MEFRGDANKRIAMISAHLQPSFTPQMEAKNSVMGRENCRAKGGNPGFKVAILGAAGGIGQ 60

Query: 56  PLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 115
            L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVII
Sbjct: 61  SLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVII 120

Query: 116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA 175
           PAGVPRKPGMTRDDLF INAGIV+TLCEG+AKCCPNA VNLISNPVNSTV IAAEVFKKA
Sbjct: 121 PAGVPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVAIAAEVFKKA 180

Query: 176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSF 235
           GTYDPKKLLGVT LDV RANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPP SF
Sbjct: 181 GTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSF 240

Query: 236 TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV 295
           T  E EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA V+EC+FV
Sbjct: 241 TPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFV 300

Query: 296 ASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           ASQVTEL FFA+KVRLGR GAEE+FQLGPLNEYER+GLEKAK+ELAGSIQKG+ F +K
Sbjct: 301 ASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q43743|MDHG1_BRANA Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2

 Score =  585 bits (1507), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 300/358 (83%), Positives = 321/358 (89%), Gaps = 5/358 (1%)

Query: 1   MEFSSEANQRIARISAHLYP---PNLQ--NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQ 55
           MEF  +A +RIA ISAHL P   P ++  NS +    CRAKGG  GFKVAILGAAGGIGQ
Sbjct: 1   MEFRGDAYKRIAMISAHLQPSFTPQMEAKNSVMGLESCRAKGGNPGFKVAILGAAGGIGQ 60

Query: 56  PLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII 115
            L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVII
Sbjct: 61  SLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVII 120

Query: 116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA 175
           PAGVPRKPGMTRDDLF INAGIVRTLCEG+AKCCPNA VNLISNPVNSTV IAAEVFKKA
Sbjct: 121 PAGVPRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLISNPVNSTVAIAAEVFKKA 180

Query: 176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSF 235
           GTYDPKKLLGVT LDV RANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPP SF
Sbjct: 181 GTYDPKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSF 240

Query: 236 TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV 295
           T  E EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA V+EC+FV
Sbjct: 241 TPSEIEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVIECSFV 300

Query: 296 ASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           ASQVTEL FFA+KVRLGR GAEE+FQLGPLNEYER+GLEKAK+ELAGSIQKG+ F +K
Sbjct: 301 ASQVTELAFFATKVRLGRTGAEEVFQLGPLNEYERVGLEKAKEELAGSIQKGVDFIRK 358

Brassica napus (taxid: 3708)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|P17783|MDHM_CITLA Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1

 Score =  423 bits (1087), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/309 (67%), Positives = 245/309 (79%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G+ Q
Sbjct: 36  KVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQ 95

Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
           L  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIV++LC  IAK CPNA +N+ISNPVN
Sbjct: 96  LGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALINMISNPVN 155

Query: 163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 222
           STVPIAAEVFKKAGTYD KKL GVT LDVVRA TF A    +   +V+VPV+GGHAG+TI
Sbjct: 156 STVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVAEVNVPVIGGHAGITI 215

Query: 223 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282
           LPL SQ  P  + + +    LT R Q+GGTEVVEAKAG GSATLSMAYA   FADACL+G
Sbjct: 216 LPLFSQATPRANLSDDTIVALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKG 275

Query: 283 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342
           L G   VVEC+FV S VTELPFFASKV+LG+ G E +  LGPL+++E+ GLEK K EL  
Sbjct: 276 LNGVPDVVECSFVQSTVTELPFFASKVKLGKNGVESVLDLGPLSDFEKEGLEKLKPELKA 335

Query: 343 SIQKGISFS 351
           SI+KGI F+
Sbjct: 336 SIEKGIQFA 344

Citrullus lanatus (taxid: 3654)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

>sp|Q9ZP06|MDHM1_ARATH Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1

 Score =  421 bits (1082), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/311 (66%), Positives = 243/311 (78%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVAILGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G   
Sbjct: 31  KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSEVVGYMGDDN 90

Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
           L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV+ LC  IAK CP+A +N+ISNPVN
Sbjct: 91  LAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPHALINMISNPVN 150

Query: 163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 222
           STVPIAAE+FKKAG YD KKL GVT LDVVRA TF A    +   +V+VPV+GGHAGVTI
Sbjct: 151 STVPIAAEIFKKAGMYDEKKLFGVTTLDVVRARTFYAGKANVPVAEVNVPVIGGHAGVTI 210

Query: 223 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282
           LPL SQ  P  + + +    LT R Q+GGTEVVEAKAG GSATLSMAYA   FADACL+G
Sbjct: 211 LPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKG 270

Query: 283 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342
           L G   V+EC++V S +TELPFFASKVRLG+ G EE+  LGPL+++E+ GLE  K EL  
Sbjct: 271 LNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKPELKS 330

Query: 343 SIQKGISFSKK 353
           SI+KG+ F+ +
Sbjct: 331 SIEKGVKFANQ 341

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
359475502	356	PREDICTED: malate dehydrogenase, glyoxys	1.0	0.991	0.907	0.0
255562058	356	malate dehydrogenase, putative [Ricinus	1.0	0.991	0.898	0.0
118489009	354	unknown [Populus trichocarpa x Populus d	0.994	0.991	0.887	0.0
224103817	354	predicted protein [Populus trichocarpa]	0.994	0.991	0.884	1e-180
158712040	354	malate dehydrogenase [Perilla frutescens	0.985	0.983	0.892	1e-180
60593475	362	Chain A, Mature And Translocatable Forms	0.991	0.966	0.883	1e-179
126894	356	RecName: Full=Malate dehydrogenase, glyo	0.991	0.983	0.883	1e-179
224056321	356	predicted protein [Populus trichocarpa]	1.0	0.991	0.887	1e-179
359496625	356	PREDICTED: malate dehydrogenase, glyoxys	1.0	0.991	0.882	1e-179
350536711	357	glyoxisomal malate dehydrogenase [Solanu	0.980	0.969	0.896	1e-178

>gi|359475502|ref|XP_003631692.1| PREDICTED: malate dehydrogenase, glyoxysomal [Vitis vinifera] gi|147774268|emb|CAN65552.1| hypothetical protein VITISV_033330 [Vitis vinifera] gi|297736349|emb|CBI25072.3| unnamed protein product [Vitis vinifera]

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/356 (90%), Positives = 339/356 (95%), Gaps = 3/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           M+ ++EANQRIAR+SAHLYP   Q   +S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPTAEANQRIARLSAHLYPSVRQMEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQPQLE+ALTGMDLVIIPA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQPQLESALTGMDLVIIPA 120

Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 237
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGH+GVTILPLLSQVKPPCSFT 
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHSGVTILPLLSQVKPPCSFTP 240

Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EET+YLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVEC FVAS
Sbjct: 241 EETQYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECTFVAS 300

Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           QVTELPFFA+KVRLGR GAEEI+QLGPLNEYER+GLEKAKKELAGSI KGISF +K
Sbjct: 301 QVTELPFFATKVRLGRSGAEEIYQLGPLNEYERVGLEKAKKELAGSIAKGISFIRK 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562058|ref|XP_002522037.1| malate dehydrogenase, putative [Ricinus communis] gi|223538636|gb|EEF40237.1| malate dehydrogenase, putative [Ricinus communis]

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/356 (89%), Positives = 338/356 (94%), Gaps = 3/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           M+ S+EA QRIARISAHL+PPN Q   +S L++A CRAKGG+ GFKVAILGAAGGIGQPL
Sbjct: 1   MDSSAEAAQRIARISAHLHPPNFQMEGSSALKRADCRAKGGSPGFKVAILGAAGGIGQPL 60

Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV+IPA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVVIPA 120

Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 237
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPPCSFT 
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPCSFTS 240

Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EETEYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFADACLRGLRGDAG+VEC+FVAS
Sbjct: 241 EETEYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADACLRGLRGDAGIVECSFVAS 300

Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           QVTELPFFA+KVRLGR GAEE++QLGPLNEYERIGLEKAKKEL  SIQKGISF KK
Sbjct: 301 QVTELPFFATKVRLGRNGAEEVYQLGPLNEYERIGLEKAKKELEASIQKGISFIKK 356

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118489009|gb|ABK96312.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  639 bits (1647), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/354 (88%), Positives = 333/354 (94%), Gaps = 3/354 (0%)

Query: 3   FSSEANQRIARISAHLYPPN--LQNSC-LRQAKCRAKGGAAGFKVAILGAAGGIGQPLAM 59
             S ANQRIAR+SAHL PPN  ++ SC L++  CRAKGGA GFKVAILGAAGGIGQPLAM
Sbjct: 1   MESVANQRIARVSAHLQPPNSQMEESCVLKRTDCRAKGGAPGFKVAILGAAGGIGQPLAM 60

Query: 60  LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119
           LMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV
Sbjct: 61  LMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 120

Query: 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 179
           PRKPGMTRDDLF INAGIVRTLCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYD
Sbjct: 121 PRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD 180

Query: 180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEE 239
           PK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQ KPP SFT EE
Sbjct: 181 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQAKPPSSFTPEE 240

Query: 240 TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 299
           TEYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS+V
Sbjct: 241 TEYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASEV 300

Query: 300 TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           TELPFFA+KVRLGR+GAEE++QLGPLNEYER+GL+KAKKELA SIQKG SF +K
Sbjct: 301 TELPFFATKVRLGRRGAEEVYQLGPLNEYERVGLQKAKKELAESIQKGTSFIRK 354

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103817|ref|XP_002313205.1| predicted protein [Populus trichocarpa] gi|118487242|gb|ABK95449.1| unknown [Populus trichocarpa] gi|222849613|gb|EEE87160.1| predicted protein [Populus trichocarpa]

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 313/354 (88%), Positives = 334/354 (94%), Gaps = 3/354 (0%)

Query: 3   FSSEANQRIARISAHLYPPN--LQNSC-LRQAKCRAKGGAAGFKVAILGAAGGIGQPLAM 59
             S ANQRIAR+SAHL PPN  ++ SC L++  CRAKGGA GFKVAILGAAGGIGQPLAM
Sbjct: 1   MESVANQRIARVSAHLQPPNSQMEESCVLKRTDCRAKGGAPGFKVAILGAAGGIGQPLAM 60

Query: 60  LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119
           LMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQPQLE+ALTGMDLVIIPAGV
Sbjct: 61  LMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQPQLESALTGMDLVIIPAGV 120

Query: 120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 179
           PRKPGMTRDDLF INAGIVRTLCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYD
Sbjct: 121 PRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD 180

Query: 180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEE 239
           PK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQ KPP SFT EE
Sbjct: 181 PKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQAKPPSSFTPEE 240

Query: 240 TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 299
           TEYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAF+AS+V
Sbjct: 241 TEYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFIASEV 300

Query: 300 TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           TELPFFA+KVRLGR+GAEE++QLGPLNEYER+GL+KAKKELA SIQKGISF +K
Sbjct: 301 TELPFFATKVRLGRRGAEEVYQLGPLNEYERVGLQKAKKELAESIQKGISFIRK 354

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|158712040|gb|ABW79813.1| malate dehydrogenase [Perilla frutescens]

 Score =  636 bits (1641), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 315/353 (89%), Positives = 331/353 (93%), Gaps = 5/353 (1%)

Query: 6   EANQRIARISAHLYPPNLQ-----NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAML 60
           EANQRIARISAHL+P N Q     +  LR A CRAKGGA GFKVAILGAAGGIGQPL+ML
Sbjct: 2   EANQRIARISAHLHPSNPQMGSEHHPILRAADCRAKGGAPGFKVAILGAAGGIGQPLSML 61

Query: 61  MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120
           MK+NPLVSVLHLYDVVN PGVTAD+SHMDTGAVVRGFLGQPQLE+ALTGMDLVIIPAGVP
Sbjct: 62  MKMNPLVSVLHLYDVVNAPGVTADVSHMDTGAVVRGFLGQPQLESALTGMDLVIIPAGVP 121

Query: 121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 180
           RKPGMTRDDLFNINAGIVRTLCEGIAK CPNA VNLISNPVNSTVPIAAEVFKKAGTYDP
Sbjct: 122 RKPGMTRDDLFNINAGIVRTLCEGIAKSCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDP 181

Query: 181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET 240
           KKLLGVTMLDVVRANTFVAEVLGLDPR+V VPVVGGHAGVTILPLLSQVKPPCSFT EET
Sbjct: 182 KKLLGVTMLDVVRANTFVAEVLGLDPREVSVPVVGGHAGVTILPLLSQVKPPCSFTPEET 241

Query: 241 EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT 300
           EYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFAD CLRGL+GDAG+VECAFVASQVT
Sbjct: 242 EYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADLCLRGLKGDAGIVECAFVASQVT 301

Query: 301 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           +LPFFA+KVRLGR GAEE+FQLGPLNEYER+GLEKAKKELA SIQKG+SF KK
Sbjct: 302 DLPFFATKVRLGRGGAEEVFQLGPLNEYERVGLEKAKKELAVSIQKGVSFIKK 354

Source: Perilla frutescens

Species: Perilla frutescens

Genus: Perilla

Family: Lamiaceae

Order: Lamiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60593475|pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures gi|60593476|pdb|1SEV|B Chain B, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 312/353 (88%), Positives = 329/353 (93%), Gaps = 3/353 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           M+   + NQRIARISAHL+PP  Q   +S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 120

Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 237
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQ 240

Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+S
Sbjct: 241 EEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSS 300

Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
           QVTELPFFASKVRLGR G EE++ LGPLNEYERIGLEKAKKELAGSI+KG+SF
Sbjct: 301 QVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSF 353

Source: Citrullus lanatus

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|126894|sp|P19446.1|MDHG_CITLA RecName: Full=Malate dehydrogenase, glyoxysomal; Flags: Precursor gi|167284|gb|AAA33041.1| glyoxysomal malate dehydrogenase precursor (EC 1.1.1.37) [Citrullus lanatus subsp. vulgaris]

 Score =  635 bits (1637), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 312/353 (88%), Positives = 329/353 (93%), Gaps = 3/353 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           M+   + NQRIARISAHL+PP  Q   +S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 120

Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 237
           YDPK+LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQ 240

Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+S
Sbjct: 241 EEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSS 300

Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
           QVTELPFFASKVRLGR G EE++ LGPLNEYERIGLEKAKKELAGSI+KG+SF
Sbjct: 301 QVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSF 353

Source: Citrullus lanatus subsp. vulgaris

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224056321|ref|XP_002298801.1| predicted protein [Populus trichocarpa] gi|222846059|gb|EEE83606.1| predicted protein [Populus trichocarpa]

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 316/356 (88%), Positives = 334/356 (93%), Gaps = 3/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQN--SC-LRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           ME   EA+QRIARISAHL PPN Q   SC L++A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MESIREASQRIARISAHLQPPNSQTEESCVLKRADCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           AMLMK+NP VSVLHLYDVVNTPGVTADI HMDTGAVVRGFLGQPQLENALTGMDLVIIPA
Sbjct: 61  AMLMKMNPSVSVLHLYDVVNTPGVTADIGHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 120

Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLFNINAGIV TLCEGIAKCCPNA VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVITLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 237
           YDPK+LLGVTMLDVVRANTFVAEVLGL P++VDVPVVGGHAGVTILPLLSQVKPP SFT 
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLHPKEVDVPVVGGHAGVTILPLLSQVKPPSSFTP 240

Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EETEYLT RIQ+GGTEVV+AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS
Sbjct: 241 EETEYLTKRIQDGGTEVVQAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 300

Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           +VTELPFFA+KVRLGR+GAEE++QLGPLNEYER+GL +AKKELA SIQKG+SF +K
Sbjct: 301 EVTELPFFATKVRLGRRGAEEVYQLGPLNEYERVGLGRAKKELAESIQKGVSFIRK 356

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359496625|ref|XP_002263670.2| PREDICTED: malate dehydrogenase, glyoxysomal [Vitis vinifera] gi|297739396|emb|CBI29427.3| unnamed protein product [Vitis vinifera]

 Score =  632 bits (1631), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 314/356 (88%), Positives = 331/356 (92%), Gaps = 3/356 (0%)

Query: 1   MEFSSEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           M  +S+ANQRIARISAHL P N Q   +S L +  CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MHPTSDANQRIARISAHLQPSNFQMGESSGLSRENCRAKGGAPGFKVAILGAAGGIGQPL 60

Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           AMLMK+NPLVSVLHLYDVVNTPGVT+DISHMDTGAVVRGFLGQ QLE+ALTGMDLVIIPA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALTGMDLVIIPA 120

Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLFNINAGIV+TLCEGIAKCCPNA VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFNINAGIVKTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGT 180

Query: 178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ 237
           +DPK+LLGVTMLDVVRANTFVAEVLGLDPR+VDVPVVGGHAGVTILPLLSQVKPPCSFT 
Sbjct: 181 FDPKRLLGVTMLDVVRANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPCSFTP 240

Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EE +YLT RIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD CLRGLRGDAGV++CA+V S
Sbjct: 241 EEIDYLTARIQNGGTEVVEAKAGAGSATLSMAYAAVKFADTCLRGLRGDAGVIQCAYVFS 300

Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           QVTELPFFASKVRLGR GAEEI+ LGPLNEYER GLEKAKKELA SIQKGISF +K
Sbjct: 301 QVTELPFFASKVRLGRTGAEEIYPLGPLNEYERAGLEKAKKELASSIQKGISFIRK 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350536711|ref|NP_001234005.1| glyoxisomal malate dehydrogenase [Solanum lycopersicum] gi|52139820|gb|AAU29200.1| glyoxisomal malate dehydrogenase [Solanum lycopersicum]

 Score =  632 bits (1629), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 313/349 (89%), Positives = 325/349 (93%), Gaps = 3/349 (0%)

Query: 5   SEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLM 61
           +E +QRIARISAHLYP N Q    S L +  CRAKGGAAGFKVAILGAAGGIGQPLAMLM
Sbjct: 6   AEVHQRIARISAHLYPSNPQMGDGSILERTNCRAKGGAAGFKVAILGAAGGIGQPLAMLM 65

Query: 62  KINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR 121
           K+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ +LE ALTGMDLVIIPAG+PR
Sbjct: 66  KMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQSELEGALTGMDLVIIPAGIPR 125

Query: 122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 181
           KPGMTRDDLF INAGIVRTLCEGIAKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYDPK
Sbjct: 126 KPGMTRDDLFKINAGIVRTLCEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPK 185

Query: 182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETE 241
           KLLGVT LDVVRANTFVAEVLGLDPR+V+VPVVGGHAGVTILPLLSQVKPPCSFT EETE
Sbjct: 186 KLLGVTSLDVVRANTFVAEVLGLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTHEETE 245

Query: 242 YLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTE 301
           YLT RIQ+GGTEVVEAK GAGSATLSMAYAAVKFAD CL+GLRGDAGVV CAFVASQVTE
Sbjct: 246 YLTKRIQDGGTEVVEAKKGAGSATLSMAYAAVKFADVCLKGLRGDAGVVACAFVASQVTE 305

Query: 302 LPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
           LPFFASKVRLGR GAEE++QLGPLNEYERIGLEKAKKELA SIQKGISF
Sbjct: 306 LPFFASKVRLGRTGAEEVYQLGPLNEYERIGLEKAKKELAESIQKGISF 354

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
TAIR|locus:2062240	354	PMDH1 "peroxisomal NAD-malate	0.985	0.983	0.815	7.1e-148
TAIR|locus:2144781	363	PMDH2 "peroxisomal NAD-malate	0.847	0.823	0.81	6.3e-124
TAIR|locus:2009605	341	mMDH1 "mitochondrial malate de	0.903	0.935	0.630	2.6e-102
TAIR|locus:2086340	341	mMDH2 "mitochondrial malate de	0.881	0.912	0.646	8.8e-102
TAIR|locus:2079177	403	MDH "malate dehydrogenase" [Ar	0.889	0.779	0.604	4.1e-97
FB|FBgn0262559	336	Mdh2 "Malate dehydrogenase 2"	0.892	0.937	0.555	1.8e-87
UNIPROTKB|E1BVT3	337	MDH2 "Malate dehydrogenase" [G	0.906	0.949	0.540	2e-86
UNIPROTKB|I3LP41	338	MDH2 "Malate dehydrogenase" [S	0.878	0.917	0.548	2.4e-85
UNIPROTKB|P00346	338	MDH2 "Malate dehydrogenase, mi	0.878	0.917	0.548	2.4e-85
WB|WBGene00003162	341	mdh-2 [Caenorhabditis elegans	0.920	0.953	0.541	4.9e-85

TAIR|locus:2062240 PMDH1 "peroxisomal NAD-malate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1444 (513.4 bits), Expect = 7.1e-148, P = 7.1e-148
 Identities = 288/353 (81%), Positives = 308/353 (87%)

Query:     6 EANQRIARISAHLYPPNLQN-----SCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAML 60
             + NQRIARISAHL PPNL N     S L +  CRAKGG+ GFKVAILGAAGGIGQPLAML
Sbjct:     2 DPNQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAML 61

Query:    61 MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP 120
             MK+NPLVSVLHLYDV N PGVTADISHMDT AVVRGFLGQPQLE ALTGMDLVIIPAGVP
Sbjct:    62 MKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVP 121

Query:   121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 180
             RKPGMTRDDLFNINAGIVRTL E IAKCCP A VN+ISNPVNSTVPIAAEVFKKAGT+DP
Sbjct:   122 RKPGMTRDDLFNINAGIVRTLSEAIAKCCPKAIVNIISNPVNSTVPIAAEVFKKAGTFDP 181

Query:   181 KKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEET 240
             KKL+GVTMLDVVRANTFVAE                HAGVTILPLLSQVKPPCSFTQ+E 
Sbjct:   182 KKLMGVTMLDVVRANTFVAEVMSLDPREVEVPVVGGHAGVTILPLLSQVKPPCSFTQKEI 241

Query:   241 EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT 300
             EYLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV+FADACLRGLRGDA +VECA+VAS VT
Sbjct:   242 EYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVEFADACLRGLRGDANIVECAYVASHVT 301

Query:   301 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
             ELPFFASKVRLGR G +E++ LGPLNEYER+GLEKAKKEL+ SI KG++F+KK
Sbjct:   302 ELPFFASKVRLGRCGIDEVYGLGPLNEYERMGLEKAKKELSVSIHKGVTFAKK 354

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0031998 "regulation of fatty acid beta-oxidation" evidence=IGI;IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0080093 "regulation of photorespiration" evidence=IMP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0007031 "peroxisome organization" evidence=RCA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2144781 PMDH2 "peroxisomal NAD-malate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
 Identities = 243/300 (81%), Positives = 258/300 (86%)

Query:     1 MEFSSEANQRIARISAHLYPP-NLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAM 59
             MEF  +ANQRIARISAHL P    +NS + +  CRAKGG  GFKVAILGAAGGIGQ L++
Sbjct:     1 MEFRGDANQRIARISAHLTPQMEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSL 60

Query:    60 LMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV 119
             LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAG+
Sbjct:    61 LMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGI 120

Query:   120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD 179
             PRKPGMTRDDLF INAGIV+TLCEG+AKCCPNA VNLISNPVNSTVPIAAEVFKKAGTYD
Sbjct:   121 PRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYD 180

Query:   180 PKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEE 239
             PKKLLGVT LDV RANTFVAE                HAGVTILPLLSQVKPP SFT +E
Sbjct:   181 PKKLLGVTTLDVARANTFVAEVLGLDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTPQE 240

Query:   240 TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQV 299
              EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA KFADACLRGLRGDA VVEC+FVASQV
Sbjct:   241 IEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAAKFADACLRGLRGDANVVECSFVASQV 300

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005773 "vacuole" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0031998 "regulation of fatty acid beta-oxidation" evidence=IGI;IMP

GO:0048046 "apoplast" evidence=IDA

GO:0080093 "regulation of photorespiration" evidence=IMP

GO:0000096 "sulfur amino acid metabolic process" evidence=RCA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0006364 "rRNA processing" evidence=RCA

GO:0006546 "glycine catabolic process" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006636 "unsaturated fatty acid biosynthetic process" evidence=RCA

GO:0006655 "phosphatidylglycerol biosynthetic process" evidence=RCA

GO:0006733 "oxidoreduction coenzyme metabolic process" evidence=RCA

GO:0006766 "vitamin metabolic process" evidence=RCA

GO:0008652 "cellular amino acid biosynthetic process" evidence=RCA

GO:0009072 "aromatic amino acid family metabolic process" evidence=RCA

GO:0009106 "lipoate metabolic process" evidence=RCA

GO:0009108 "coenzyme biosynthetic process" evidence=RCA

GO:0009117 "nucleotide metabolic process" evidence=RCA

GO:0009416 "response to light stimulus" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009657 "plastid organization" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009902 "chloroplast relocation" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0010207 "photosystem II assembly" evidence=RCA

GO:0010304 "PSII associated light-harvesting complex II catabolic process" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015994 "chlorophyll metabolic process" evidence=RCA

GO:0015995 "chlorophyll biosynthetic process" evidence=RCA

GO:0016117 "carotenoid biosynthetic process" evidence=RCA

GO:0019216 "regulation of lipid metabolic process" evidence=RCA

GO:0019288 "isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway" evidence=RCA

GO:0019748 "secondary metabolic process" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0031408 "oxylipin biosynthetic process" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0043085 "positive regulation of catalytic activity" evidence=RCA

GO:0044242 "cellular lipid catabolic process" evidence=RCA

GO:0044272 "sulfur compound biosynthetic process" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0042579 "microbody" evidence=ISS

TAIR|locus:2009605 mMDH1 "mitochondrial malate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 201/319 (63%), Positives = 235/319 (73%)

Query:    35 AKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV 94
             + G     KVAILGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+ H++T + V
Sbjct:    23 SSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSEV 82

Query:    95 RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 154
              G++G   L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV+ LC  IAK CP+A +
Sbjct:    83 VGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPHALI 142

Query:   155 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXX 214
             N+ISNPVNSTVPIAAE+FKKAG YD KKL GVT LDVVRA TF A               
Sbjct:   143 NMISNPVNSTVPIAAEIFKKAGMYDEKKLFGVTTLDVVRARTFYAGKANVPVAEVNVPVI 202

Query:   215 XXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK 274
               HAGVTILPL SQ  P  + + +    LT R Q+GGTEVVEAKAG GSATLSMAYA   
Sbjct:   203 GGHAGVTILPLFSQATPQANLSSDILTALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAL 262

Query:   275 FADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 334
             FADACL+GL G   V+EC++V S +TELPFFASKVRLG+ G EE+  LGPL+++E+ GLE
Sbjct:   263 FADACLKGLNGVPDVIECSYVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLE 322

Query:   335 KAKKELAGSIQKGISFSKK 353
               K EL  SI+KG+ F+ +
Sbjct:   323 ALKPELKSSIEKGVKFANQ 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;IMP

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009409 "response to cold" evidence=IEP

GO:0005618 "cell wall" evidence=IDA

GO:0046686 "response to cadmium ion" evidence=IEP;RCA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0009507 "chloroplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0048046 "apoplast" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0006094 "gluconeogenesis" evidence=RCA

GO:0006096 "glycolysis" evidence=RCA

GO:0006833 "water transport" evidence=RCA

GO:0006972 "hyperosmotic response" evidence=RCA

GO:0007030 "Golgi organization" evidence=RCA

GO:0009266 "response to temperature stimulus" evidence=RCA

TAIR|locus:2086340 mMDH2 "mitochondrial malate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
 Identities = 201/311 (64%), Positives = 231/311 (74%)

Query:    43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
             KV ILGAAGGIGQPL++LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G   
Sbjct:    31 KVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDD 90

Query:   103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
             L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV+ L   IAK CP A VN+ISNPVN
Sbjct:    91 LGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNMISNPVN 150

Query:   163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 222
             STVPIAAE+FKKAGTYD KKL GVT LDVVRA TF A                 HAG+TI
Sbjct:   151 STVPIAAEIFKKAGTYDEKKLFGVTTLDVVRARTFYAGKSDVNVAEVNVPVVGGHAGITI 210

Query:   223 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282
             LPL SQ  P  + + +    LT R Q+GGTEVVEAKAG GSATLSMAYA   FADACL+G
Sbjct:   211 LPLFSQASPQANLSDDLIRALTKRTQDGGTEVVEAKAGKGSATLSMAYAGALFADACLKG 270

Query:   283 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342
             L G   VVEC+FV S +TELPFFASKVRLG+ G EE+  LGPL+++E+ GLE  K EL  
Sbjct:   271 LNGVPNVVECSFVQSTITELPFFASKVRLGKNGVEEVLDLGPLSDFEKEGLEALKAELKS 330

Query:   343 SIQKGISFSKK 353
             SI+KGI F+ +
Sbjct:   331 SIEKGIKFANQ 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;IGI

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0016020 "membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0005507 "copper ion binding" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009853 "photorespiration" evidence=RCA

TAIR|locus:2079177 MDH "malate dehydrogenase" [Arabidopsis thaliana (taxid:3702)]

 Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
 Identities = 191/316 (60%), Positives = 237/316 (75%)

Query:    40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG 99
             A +KVA+LGAAGGIGQPL++L+K++PLVS LHLYD+ N  GV AD+SH +T + VR F G
Sbjct:    81 ASYKVAVLGAAGGIGQPLSLLIKMSPLVSTLHLYDIANVKGVAADLSHCNTPSQVRDFTG 140

Query:   100 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159
               +L + L  +++V+IPAGVPRKPGMTRDDLFNINA IV+TL E +A+ CPNA +++ISN
Sbjct:   141 PSELADCLKDVNVVVIPAGVPRKPGMTRDDLFNINANIVKTLVEAVAENCPNAFIHIISN 200

Query:   160 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 219
             PVNSTVPIAAEV KK G YDPKKL GVT LDVVRANTFV++                HAG
Sbjct:   201 PVNSTVPIAAEVLKKKGVYDPKKLFGVTTLDVVRANTFVSQKKNLKLIDVDVPVIGGHAG 260

Query:   220 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 279
             +TILPLLS+ KP  +FT EE + LT RIQN GTEVV+AKAGAGSATLSMAYAA +F ++ 
Sbjct:   261 ITILPLLSKTKPSVNFTDEEIQELTVRIQNAGTEVVDAKAGAGSATLSMAYAAARFVESS 320

Query:   280 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ--LGPLNEYERIGLEKAK 337
             LR L GD  V EC+FV S +T+LPFFAS+V++G+ G E + +  L  L EYE+  LE  K
Sbjct:   321 LRALDGDGDVYECSFVESTLTDLPFFASRVKIGKNGLEAVIESDLQGLTEYEQKALEALK 380

Query:   338 KELAGSIQKGISFSKK 353
              EL  SI KG++F+ K
Sbjct:   381 VELKASIDKGVAFANK 396

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA;ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;IDA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

GO:0009536 "plastid" evidence=IDA

FB|FBgn0262559 Mdh2 "Malate dehydrogenase 2" [Drosophila melanogaster (taxid:7227)]

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 175/315 (55%), Positives = 223/315 (70%)

Query:    37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG 96
             G    +KV + GAAGGIGQPL++L+K NPLV+ L LYD+V+TPGV AD+SH+DT +   G
Sbjct:    20 GQQNNYKVTVCGAAGGIGQPLSLLLKQNPLVTDLALYDIVHTPGVAADLSHIDTKSKTAG 79

Query:    97 FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
             F+G  QL ++L G D+V+IPAGVPRKPGMTRDDLFN+NAGI++ +   IAK CP A V +
Sbjct:    80 FIGADQLGDSLKGSDVVVIPAGVPRKPGMTRDDLFNVNAGIIKDISNSIAKNCPKALVAI 139

Query:   157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXX 216
             I+NPVN+ VPIAAE+ KKAG YDPK+L GV+ LDVVRA  F+                  
Sbjct:   140 ITNPVNTCVPIAAEILKKAGVYDPKRLFGVSTLDVVRARAFIGHALGVDPQTVQIPVIGG 199

Query:   217 HAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA 276
             H+GVTILP+LSQ +P     Q+  E LT RIQ  GTEVV+AKAGAGSATLSMAYA  +FA
Sbjct:   200 HSGVTILPVLSQSQPLFKGNQDTIEKLTVRIQEAGTEVVKAKAGAGSATLSMAYAGARFA 259

Query:   277 DACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 336
              + L+GL G+  V+EC++V S VTE  FF++ + LG+ G +E   L  LN+YE+  LE A
Sbjct:   260 GSLLKGLNGEKNVIECSYVQSTVTEATFFSTPLVLGKNGVQENLGLPKLNDYEKKLLEAA 319

Query:   337 KKELAGSIQKGISFS 351
               EL  +IQKGI F+
Sbjct:   320 IPELKKNIQKGIDFA 334

GO:0005739 "mitochondrion" evidence=IDA;TAS

GO:0030060 "L-malate dehydrogenase activity" evidence=ISS;TAS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0006099 "tricarboxylic acid cycle" evidence=ISS;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0005811 "lipid particle" evidence=IDA

GO:0043067 "regulation of programmed cell death" evidence=IMP

GO:0035070 "salivary gland histolysis" evidence=IMP

GO:0016615 "malate dehydrogenase activity" evidence=IDA

GO:0043068 "positive regulation of programmed cell death" evidence=IMP

GO:0006919 "activation of cysteine-type endopeptidase activity involved in apoptotic process" evidence=IMP

GO:0035209 "pupal development" evidence=IMP

UNIPROTKB|E1BVT3 MDH2 "Malate dehydrogenase" [Gallus gallus (taxid:9031)]

 Score = 864 (309.2 bits), Expect = 2.0e-86, P = 2.0e-86
 Identities = 174/322 (54%), Positives = 222/322 (68%)

Query:    33 CRAKGGAA--GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT 90
             CR    +A    KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T
Sbjct:    13 CRGLATSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIET 72

Query:    91 GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP 150
              A V+GFLG  QL   L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    AK CP
Sbjct:    73 RANVKGFLGPEQLPECLKGCDVVVIPAGVPRKPGMTRDDLFNTNASIVATLTTACAKHCP 132

Query:   151 NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXX 210
              A + +ISNPVNST+PI +EVFKK G Y+P ++ GVT LD+VRANTFVAE          
Sbjct:   133 EAMICIISNPVNSTIPITSEVFKKHGVYNPNRIFGVTTLDIVRANTFVAELKGLDPARVS 192

Query:   211 XXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY 270
                   HAG TI+PL+SQ  P   F Q++ E LT RIQ  GTEVV+AKAGAGSATLSMAY
Sbjct:   193 VPVIGGHAGKTIIPLISQCTPKVDFPQDQLEKLTGRIQEAGTEVVKAKAGAGSATLSMAY 252

Query:   271 AAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYER 330
             A  +F  + +  + G  GV+EC+FV S+ TE P+F++ + LG+ G E+   +G +  +E 
Sbjct:   253 AGARFVFSLVDAMNGKEGVIECSFVRSEETESPYFSTPLLLGKNGIEKNLGIGKITPFEE 312

Query:   331 IGLEKAKKELAGSIQKGISFSK 352
               + +A  EL  SI+KG  F+K
Sbjct:   313 KMVAEAMAELKASIKKGEDFAK 334

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006475 "internal protein amino acid acetylation" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

UNIPROTKB|I3LP41 MDH2 "Malate dehydrogenase" [Sus scrofa (taxid:9823)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 170/310 (54%), Positives = 219/310 (70%)

Query:    43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
             KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct:    26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 85

Query:   103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
             L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct:    86 LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 145

Query:   163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 222
             ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE                HAG TI
Sbjct:   146 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 205

Query:   223 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282
             +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct:   206 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 265

Query:   283 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342
             + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E   + +A  EL  
Sbjct:   266 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 325

Query:   343 SIQKGISFSK 352
             SI+KG  F K
Sbjct:   326 SIKKGEEFVK 335

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|P00346 MDH2 "Malate dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)]

 Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
 Identities = 170/310 (54%), Positives = 219/310 (70%)

Query:    43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
             KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct:    26 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 85

Query:   103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
             L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct:    86 LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 145

Query:   163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 222
             ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE                HAG TI
Sbjct:   146 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 205

Query:   223 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282
             +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct:   206 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 265

Query:   283 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342
             + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E   + +A  EL  
Sbjct:   266 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 325

Query:   343 SIQKGISFSK 352
             SI+KG  F K
Sbjct:   326 SIKKGEEFVK 335

GO:0006475 "internal protein amino acid acetylation" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA

GO:0006099 "tricarboxylic acid cycle" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0006108 "malate metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

WB|WBGene00003162 mdh-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
 Identities = 178/329 (54%), Positives = 228/329 (69%)

Query:    25 NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD 84
             NS LR    R    A   KVA+LGAAGGIGQPL +L+K +PLV+ L LYDVVNTPGV AD
Sbjct:    14 NSGLRAVSVRHSSQAP--KVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAAD 71

Query:    85 ISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG 144
             +SH+D+ A V    G  +L  A+   D+++IPAGVPRKPGMTRDDLFN NAGIVR L   
Sbjct:    72 LSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAV 131

Query:   145 IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXX 204
             IAK  P A + +I+NPVNSTVPIA+EV KKAG YDPK++ GVT LDVVR+  FV+E    
Sbjct:   132 IAKASPKALIAIITNPVNSTVPIASEVLKKAGVYDPKRVFGVTTLDVVRSQAFVSELKGH 191

Query:   205 XXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 264
                         HAG+TI+PLLSQVKP   F++EE   LT RIQ+ GTEVV AKAGAGSA
Sbjct:   192 DASKTVVPVVGGHAGITIIPLLSQVKPSTKFSEEEISKLTPRIQDAGTEVVNAKAGAGSA 251

Query:   265 TLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTE-LPFFASKVRLGRQGAEEIFQLG 323
             TLSMA A  +FA+A +RG++G+  V +CA+VAS   + + +F++ V LG  G E+I  +G
Sbjct:   252 TLSMALAGARFANALVRGIKGEKNV-QCAYVASDAVKGVEYFSTPVELGPNGVEKILGVG 310

Query:   324 PLNEYERIGLEKAKKELAGSIQKGISFSK 352
              ++ YE+  ++ +  EL  +I KG++F K
Sbjct:   311 KVSAYEQKLIDASVPELNKNIAKGVAFVK 339

GO:0030060 "L-malate dehydrogenase activity" evidence=IEA;ISS

GO:0006108 "malate metabolic process" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016615 "malate dehydrogenase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0044262 "cellular carbohydrate metabolic process" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0071688 "striated muscle myosin thick filament assembly" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0005739 "mitochondrion" evidence=ISS;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A4WF48	MDH_ENT38	1, ., 1, ., 1, ., 3, 7	0.5445	0.8781	0.9935	yes	no
Q43744	MDHM_BRANA	1, ., 1, ., 1, ., 3, 7	0.6090	0.9291	0.9618	N/A	no
Q43743	MDHG1_BRANA	1, ., 1, ., 1, ., 3, 7	0.8379	1.0	0.9860	N/A	no
B5BGR3	MDH_SALPK	1, ., 1, ., 1, ., 3, 7	0.5541	0.8781	0.9935	yes	no
Q5NVR2	MDHM_PONAB	1, ., 1, ., 1, ., 3, 7	0.5806	0.8781	0.9171	yes	no
Q1CEJ3	MDH_YERPN	1, ., 1, ., 1, ., 3, 7	0.5498	0.8696	0.9839	yes	no
Q9KUT3	MDH_VIBCH	1, ., 1, ., 1, ., 3, 7	0.5559	0.8753	0.9935	yes	no
A9R584	MDH_YERPG	1, ., 1, ., 1, ., 3, 7	0.5498	0.8696	0.9839	yes	no
Q42972	MDHG_ORYSJ	1, ., 1, ., 1, ., 3, 7	0.8483	1.0	0.9915	yes	no
Q1CBY7	MDH_YERPA	1, ., 1, ., 1, ., 3, 7	0.5498	0.8696	0.9839	yes	no
P08249	MDHM_MOUSE	1, ., 1, ., 1, ., 3, 7	0.5806	0.8781	0.9171	yes	no
P46487	MDHM_EUCGU	1, ., 1, ., 1, ., 3, 7	0.6698	0.8810	0.8962	N/A	no
B7LRL0	MDH_ESCF3	1, ., 1, ., 1, ., 3, 7	0.5477	0.8781	0.9935	yes	no
P83373	MDHM_FRAAN	1, ., 1, ., 1, ., 3, 7	0.6623	0.8810	0.9174	N/A	no
P17783	MDHM_CITLA	1, ., 1, ., 1, ., 3, 7	0.6763	0.8753	0.8904	N/A	no
Q9ZP05	MDHG1_ARATH	1, ., 1, ., 1, ., 3, 7	0.8531	1.0	0.9971	no	no
A7FMU2	MDH_YERP3	1, ., 1, ., 1, ., 3, 7	0.5498	0.8696	0.9839	yes	no
P46488	MDHG_CUCSA	1, ., 1, ., 1, ., 3, 7	0.8760	0.9971	0.9887	N/A	no
P61892	MDH_YERPE	1, ., 1, ., 1, ., 3, 7	0.5498	0.8696	0.9839	yes	no
A7MWD3	MDH_VIBHB	1, ., 1, ., 1, ., 3, 7	0.5718	0.8753	0.9935	yes	no
A4TRK3	MDH_YERPP	1, ., 1, ., 1, ., 3, 7	0.5498	0.8696	0.9839	yes	no
Q32LG3	MDHM_BOVIN	1, ., 1, ., 1, ., 3, 7	0.5774	0.8781	0.9171	yes	no
Q7MP97	MDH_VIBVY	1, ., 1, ., 1, ., 3, 7	0.5591	0.8725	0.9935	yes	no
Q9XFW3	MDHG2_BRANA	1, ., 1, ., 1, ., 3, 7	0.8379	1.0	0.9860	N/A	no
P37228	MDHG_SOYBN	1, ., 1, ., 1, ., 3, 7	0.8356	1.0	1.0	yes	no
P0C7R5	MDH_YERPS	1, ., 1, ., 1, ., 3, 7	0.5498	0.8696	0.9839	yes	no
Q7MYW9	MDH_PHOLL	1, ., 1, ., 1, ., 3, 7	0.5530	0.8696	0.9839	yes	no
O02640	MDHM_CAEEL	1, ., 1, ., 1, ., 3, 7	0.5683	0.9206	0.9530	yes	no
P40926	MDHM_HUMAN	1, ., 1, ., 1, ., 3, 7	0.5806	0.8781	0.9171	yes	no
B4T769	MDH_SALNS	1, ., 1, ., 1, ., 3, 7	0.5541	0.8781	0.9935	yes	no
B1IQP3	MDH_ECOLC	1, ., 1, ., 1, ., 3, 7	0.5509	0.8781	0.9935	yes	no
B4TWK9	MDH_SALSV	1, ., 1, ., 1, ., 3, 7	0.5541	0.8781	0.9935	yes	no
Q6D9D1	MDH_ERWCT	1, ., 1, ., 1, ., 3, 7	0.5495	0.8753	0.9935	yes	no
B1JMK1	MDH_YERPY	1, ., 1, ., 1, ., 3, 7	0.5498	0.8696	0.9839	yes	no
P04636	MDHM_RAT	1, ., 1, ., 1, ., 3, 7	0.5774	0.8781	0.9171	yes	no
C6DKH1	MDH_PECCP	1, ., 1, ., 1, ., 3, 7	0.5559	0.8753	0.9903	yes	no
P19446	MDHG_CITLA	1, ., 1, ., 1, ., 3, 7	0.8838	0.9915	0.9831	N/A	no
Q5R030	MDH_IDILO	1, ., 1, ., 1, ., 3, 7	0.5641	0.8696	0.9903	yes	no
Q42686	MDHM_CHLRE	1, ., 1, ., 1, ., 3, 7	0.6442	0.8781	0.8310	N/A	no
P00346	MDHM_PIG	1, ., 1, ., 1, ., 3, 7	0.5806	0.8781	0.9171	yes	no
P25077	MDH_SALTY	1, ., 1, ., 1, ., 3, 7	0.5541	0.8781	0.9935	yes	no
O82399	MDHG2_ARATH	1, ., 1, ., 1, ., 3, 7	0.8498	0.9858	0.9830	yes	no
B2K2N5	MDH_YERPB	1, ., 1, ., 1, ., 3, 7	0.5498	0.8696	0.9839	yes	no
B7VID0	MDH_VIBSL	1, ., 1, ., 1, ., 3, 7	0.5591	0.8753	0.9935	yes	no
Q87SU7	MDH_VIBPA	1, ., 1, ., 1, ., 3, 7	0.5654	0.8753	0.9935	yes	no
Q4R568	MDHM_MACFA	1, ., 1, ., 1, ., 3, 7	0.5806	0.8781	0.9171	N/A	no
Q8Z3E0	MDH_SALTI	1, ., 1, ., 1, ., 3, 7	0.5541	0.8781	0.9935	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.998
3rd Layer	1.1.1.37	0.994

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	Mdhg	RecName- Full=Malate dehydrogenase; EC=1.1.1.37; (356 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00003727001	RecName- Full=Citrate synthase; (472 aa)				•	•	•	•		0.956
	GSVIVG00017898001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (565 aa)						•	•		0.941
	GSVIVG00028048001	SubName- Full=Chromosome chr7 scaffold_42, whole genome shotgun sequence; (470 aa)						•	•		0.929
	VVME2	RecName- Full=Malic enzyme; (591 aa)						•	•		0.905
	NADP-ME	RecName- Full=Malic enzyme; (496 aa)						•	•		0.905
	GSVIVG00016723001	RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (411 aa)						•	•		0.903
	GSVIVG00032723001	RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (410 aa)						•	•		0.903
	GSVIVG00032463001	RecName- Full=Aspartate aminotransferase; EC=2.6.1.1; (450 aa)						•	•		0.902
	GSVIVG00026767001	RecName- Full=Malic enzyme; (605 aa)						•	•		0.902
	GSVIVG00018984001	RecName- Full=Malic enzyme; (625 aa)						•	•		0.902

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	353
PLN00106	323	PLN00106, PLN00106, malate dehydrogenase	0.0
cd01337	310	cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysoma	0.0
TIGR01772	312	TIGR01772, MDH_euk_gproteo, malate dehydrogenase,	1e-151
PRK05086	312	PRK05086, PRK05086, malate dehydrogenase; Provisio	1e-145
PTZ00325	321	PTZ00325, PTZ00325, malate dehydrogenase; Provisio	1e-142
COG0039	313	COG0039, Mdh, Malate/lactate dehydrogenases [Energ	3e-80
pfam02866	173	pfam02866, Ldh_1_C, lactate/malate dehydrogenase,	4e-58
pfam00056	142	pfam00056, Ldh_1_N, lactate/malate dehydrogenase,	4e-54
cd01339	300	cd01339, LDH-like_MDH, L-lactate dehydrogenase-lik	5e-47
PRK06223	307	PRK06223, PRK06223, malate dehydrogenase; Reviewed	6e-46
cd00650	263	cd00650, LDH_MDH_like, NAD-dependent, lactate dehy	3e-36
PTZ00117	319	PTZ00117, PTZ00117, malate dehydrogenase; Provisio	5e-34
PTZ00082	321	PTZ00082, PTZ00082, L-lactate dehydrogenase; Provi	7e-32
cd00300	300	cd00300, LDH_like, L-lactate dehydrogenase-like en	1e-31
TIGR01763	305	TIGR01763, MalateDH_bact, malate dehydrogenase, NA	2e-27
cd05294	309	cd05294, LDH-like_MDH_nadp, A lactate dehydrogenas	1e-23
TIGR01771	299	TIGR01771, L-LDH-NAD, L-lactate dehydrogenase	2e-22
cd05291	306	cd05291, HicDH_like, L-2-hydroxyisocapronate dehyd	1e-20
cd00704	323	cd00704, MDH, Malate dehydrogenase	6e-18
cd05292	308	cd05292, LDH_2, A subgroup of L-lactate dehydrogen	9e-18
TIGR01759	323	TIGR01759, MalateDH-SF1, malate dehydrogenase	5e-16
cd05290	307	cd05290, LDH_3, A subgroup of L-lactate dehydrogen	6e-15
cd05293	312	cd05293, LDH_1, A subgroup of L-lactate dehydrogen	1e-13
TIGR01758	324	TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-	2e-13
PRK00066	315	PRK00066, ldh, L-lactate dehydrogenase; Reviewed	7e-13
PLN02602	350	PLN02602, PLN02602, lactate dehydrogenase	2e-12
cd01336	325	cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic an	2e-11
TIGR01756	313	TIGR01756, LDH_protist, lactate dehydrogenase	3e-10
PLN00135	309	PLN00135, PLN00135, malate dehydrogenase	6e-08
cd01338	322	cd01338, MDH_choloroplast_like, Chloroplast-like m	8e-08
PRK05442	326	PRK05442, PRK05442, malate dehydrogenase; Provisio	1e-05
PLN00112	444	PLN00112, PLN00112, malate dehydrogenase (NADP); P	0.002

>gnl|CDD|215058 PLN00106, PLN00106, malate dehydrogenase

 Score =  655 bits (1693), Expect = 0.0
 Identities = 249/314 (79%), Positives = 271/314 (86%)

Query: 33  CRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA 92
           CRAKGGA GFKVA+LGAAGGIGQPL++LMK+NPLVS LHLYD+ NTPGV AD+SH++T A
Sbjct: 10  CRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPA 69

Query: 93  VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 152
            VRGFLG  QL +AL G DLVIIPAGVPRKPGMTRDDLFNINAGIV+TLCE +AK CPNA
Sbjct: 70  QVRGFLGDDQLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNA 129

Query: 153 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP 212
            VN+ISNPVNSTVPIAAEV KKAG YDPKKL GVT LDVVRANTFVAE  GLDP DVDVP
Sbjct: 130 LVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKGLDPADVDVP 189

Query: 213 VVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA 272
           VVGGHAG+TILPLLSQ  P  SFT EE E LT RIQNGGTEVVEAKAGAGSATLSMAYAA
Sbjct: 190 VVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSMAYAA 249

Query: 273 VKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIG 332
            +FADACLRGL G+A VVEC++V S+VTELPFFASKVRLGR G EE+  LGPL+EYE+ G
Sbjct: 250 ARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKG 309

Query: 333 LEKAKKELAGSIQK 346
           LE  K EL  SI+K
Sbjct: 310 LEALKPELKASIEK 323

Length = 323

>gnl|CDD|133422 cd01337, MDH_glyoxysomal_mitochondrial, Glyoxysomal and mitochondrial malate dehydrogenases

 Score =  570 bits (1471), Expect = 0.0
 Identities = 212/309 (68%), Positives = 253/309 (81%)

Query: 42  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 101
            KVA+LGAAGGIGQPL++L+K+NPLVS L LYD+VNTPGV AD+SH++T A V G+LG  
Sbjct: 1   VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPE 60

Query: 102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 161
           +L+ AL G D+V+IPAGVPRKPGMTRDDLFNINAGIVR L   +AK CP A + +ISNPV
Sbjct: 61  ELKKALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPV 120

Query: 162 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVT 221
           NSTVPIAAEV KKAG YDPK+L GVT LDVVRANTFVAE+LGLDP  V+VPV+GGH+GVT
Sbjct: 121 NSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAELLGLDPAKVNVPVIGGHSGVT 180

Query: 222 ILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLR 281
           ILPLLSQ +PP +F QEE E LT+RIQ GG EVV+AKAGAGSATLSMAYA  +FA++ LR
Sbjct: 181 ILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLLR 240

Query: 282 GLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA 341
           GL+G+ GV+ECA+V S VTE PFFA+ V LG+ G E+   LG LN+YE+  LE A  EL 
Sbjct: 241 GLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELK 300

Query: 342 GSIQKGISF 350
            +I+KG+ F
Sbjct: 301 KNIEKGVDF 309

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 310

>gnl|CDD|130833 TIGR01772, MDH_euk_gproteo, malate dehydrogenase, NAD-dependent

 Score =  428 bits (1102), Expect = e-151
 Identities = 185/312 (59%), Positives = 233/312 (74%), Gaps = 1/312 (0%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVA+LGAAGGIGQPL++L+K+ P VS L LYD+    GV AD+SH+ T A V+GF G+  
Sbjct: 1   KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEG 60

Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
           LENAL G D+V+IPAGVPRKPGMTRDDLFN+NAGIV+ L   +A+ CP A + +I+NPVN
Sbjct: 61  LENALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVN 120

Query: 163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 222
           STVPIAAEV KK G YDP KL GVT LD+VRANTFVAE+ G DP +V+VPV+GGH+G TI
Sbjct: 121 STVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELKGKDPMEVNVPVIGGHSGETI 180

Query: 223 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282
           +PL+SQ      FT+++ E L +RIQN GTEVV+AKAGAGSATLSMA+A  +F  + +RG
Sbjct: 181 IPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG 240

Query: 283 LRGDAGVVECAFVASQ-VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA 341
           L+G+ GVVECA+V S  VTE  FFA+ + LG+ G E+   +G L+ +E   L  A  EL 
Sbjct: 241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGALPELK 300

Query: 342 GSIQKGISFSKK 353
            +I+KG  F   
Sbjct: 301 KNIKKGEEFVAS 312

This model represents the NAD-dependent malate dehydrogenase found in eukaryotes and certain gamma proteobacteria. The enzyme is involved in the citric acid cycle as well as the glyoxalate cycle. Several isoforms exidt in eukaryotes. In S. cereviseae, for example, there are cytoplasmic, mitochondrial and peroxisomal forms. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases [Energy metabolism, TCA cycle]. Length = 312

>gnl|CDD|235340 PRK05086, PRK05086, malate dehydrogenase; Provisional

 Score =  412 bits (1060), Expect = e-145
 Identities = 176/313 (56%), Positives = 214/313 (68%), Gaps = 4/313 (1%)

Query: 43  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 100
           KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE 61

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
                AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L E +AK CP A + +I+NP
Sbjct: 62  -DPTPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNP 120

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 220
           VN+TV IAAEV KKAG YD  KL GVT LDV+R+ TFVAE+ G  P +V+VPV+GGH+GV
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVAELKGKQPGEVEVPVIGGHSGV 180

Query: 221 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 280
           TILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + +
Sbjct: 181 TILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV 239

Query: 281 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 340
           R L+G+ GVVECA+V        FFA  V LG+ G EE   +G L+ +E+  LE     L
Sbjct: 240 RALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGMLDTL 299

Query: 341 AGSIQKGISFSKK 353
              I  G  F  K
Sbjct: 300 KKDIALGEEFVNK 312

Length = 312

>gnl|CDD|240360 PTZ00325, PTZ00325, malate dehydrogenase; Provisional

 Score =  405 bits (1042), Expect = e-142
 Identities = 192/313 (61%), Positives = 234/313 (74%), Gaps = 3/313 (0%)

Query: 42  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 101
           FKVA+LGAAGGIGQPL++L+K NP VS L LYD+V  PGV AD+SH+DT A V G+    
Sbjct: 9   FKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGE 68

Query: 102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 161
             E AL G DLV+I AGVPRKPGMTRDDLFN NA IVR L   +A   P A V ++SNPV
Sbjct: 69  LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPV 128

Query: 162 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVT 221
           NSTVPIAAE  KKAG YDP+KL GVT LDVVRA  FVAE LG++P DV+VPVVGGH+GVT
Sbjct: 129 NSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFVAEALGMNPYDVNVPVVGGHSGVT 188

Query: 222 ILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLR 281
           I+PLLSQ     S  +E+ E +T+R+Q GG EVV+AK GAGSATLSMAYAA +++ + L+
Sbjct: 189 IVPLLSQT--GLSLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTSVLK 246

Query: 282 GLRGDAGVVECAFVASQVT-ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 340
            LRGD G+VECAFV S +  E PFF+S V LG++G E +  +GPLN YE   LE A  +L
Sbjct: 247 ALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEELLEAAVPDL 306

Query: 341 AGSIQKGISFSKK 353
             +I+KG+ F++K
Sbjct: 307 KKNIEKGLEFARK 319

Length = 321

>gnl|CDD|223117 COG0039, Mdh, Malate/lactate dehydrogenases [Energy production and conversion]

 Score =  247 bits (632), Expect = 3e-80
 Identities = 113/319 (35%), Positives = 166/319 (52%), Gaps = 21/319 (6%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           KVA++GA G +G  LA L+ +  L S L L D+      GV  D+SH          +  
Sbjct: 2   KVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITG 60

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
                 L G D+V+I AGVPRKPGMTR DL   NA IV+ + + IAK  P+A V +++NP
Sbjct: 61  DGDYEDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNP 120

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 220
           V+    IA +    +G    + +   T+LD  R  TF+AE LG+ P+DV   V+G H G 
Sbjct: 121 VDILTYIAMKF---SGFPKNRVIGSGTVLDSARFRTFLAEKLGVSPKDVHAYVIGEH-GD 176

Query: 221 TILPLLSQV----KPPCSF----TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA 272
           T++PL SQ     KP        T+E+ E L  R++N G E++EAK GAG      A A 
Sbjct: 177 TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGPAAAL 234

Query: 273 VKFADACLRGLRGDAGVVECAFVASQ-VTELPFFASKVRLGRQGAEEIFQLGPLNEYERI 331
            +  +A LR  +    +    ++  +   E  +F     LG+ G EEI +L  L++ E+ 
Sbjct: 235 ARMVEAILRDEK--RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQE 291

Query: 332 GLEKAKKELAGSIQKGISF 350
            L+K+ +EL  +I+     
Sbjct: 292 KLDKSAEELKKNIELVKEL 310

Length = 313

>gnl|CDD|202437 pfam02866, Ldh_1_C, lactate/malate dehydrogenase, alpha/beta C-terminal domain

 Score =  185 bits (472), Expect = 4e-58
 Identities = 79/176 (44%), Positives = 103/176 (58%), Gaps = 16/176 (9%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAG----------VTILPLLSQVKPPCSFT 236
           T LD  RA TF+AE  G+DPR V+V V+G H+G          VTI+PL+SQVK     T
Sbjct: 1   TTLDTARARTFLAEKFGVDPRSVNVYVIGEHSGTQFPDWSHAKVTIIPLISQVKENLKDT 60

Query: 237 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGD--AGVVECAF 294
             E E L  R+QN G EV+EAK  AGS T SMAYAA + A A LRG  G    GV    +
Sbjct: 61  DWELEELIERVQNAGYEVIEAK--AGSTTYSMAYAAARIAKAILRGTGGVLSVGVYLDGY 118

Query: 295 VASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
                 +  +F+  V LG+ G E++ ++ PLN++ER  LEK+  EL   I+KG +F
Sbjct: 119 Y--GSPDDIYFSVPVVLGKDGVEKVVEILPLNDFEREKLEKSAAELKKEIEKGFAF 172

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. Length = 173

>gnl|CDD|200963 pfam00056, Ldh_1_N, lactate/malate dehydrogenase, NAD binding domain

 Score =  174 bits (443), Expect = 4e-54
 Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 6/145 (4%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV--NTPGVTADISHMDTGAVVRGFLGQ 100
           KVA++GA GG+G  LA  + +  L   L L D+      GV  D+SH  T   V G +G 
Sbjct: 2   KVAVVGAGGGVGSSLAFALALQGLADELVLVDINKDKAEGVAMDLSHGSTFLSVPGIVGG 61

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
                AL   D+V+I AGVPRKPGMTR DL N NAGI + +   IAK  P+A V ++SNP
Sbjct: 62  DD-YEALKDADVVVITAGVPRKPGMTRLDLLNRNAGIFKDIVPAIAKSAPDAIVLVVSNP 120

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLG 185
           V+    IA +V   +G    + +  
Sbjct: 121 VDILTYIAWKV---SGLPPERVIGS 142

L-lactate dehydrogenases are metabolic enzymes which catalyze the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyze the interconversion of malate to oxaloacetate. The enzyme participates in the citric acid cycle. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. N-terminus (this family) is a Rossmann NAD-binding fold. C-terminus is an unusual alpha+beta fold. Length = 142

>gnl|CDD|133424 cd01339, LDH-like_MDH, L-lactate dehydrogenase-like malate dehydrogenase proteins

 Score =  161 bits (409), Expect = 5e-47
 Identities = 102/323 (31%), Positives = 158/323 (48%), Gaps = 46/323 (14%)

Query: 44  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHM----DTGAVVRGF 97
           ++I+GA G +G  LA L+ +  L  V+ L D+V   P G   DIS       +   V G 
Sbjct: 1   ISIIGA-GNVGATLAQLLALKELGDVV-LLDIVEGLPQGKALDISQAAPILGSDTKVTGT 58

Query: 98  LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
                +  +    D+V+I AG+PRKPGM+RDDL   NA IV+ + E I K  PNA V ++
Sbjct: 59  NDYEDIAGS----DVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVV 114

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           +NP++        V  KA  +   +++G+  +LD  R   F+AE LG+  +DV   V+GG
Sbjct: 115 TNPLDVMT----YVAYKASGFPRNRVIGMAGVLDSARFRYFIAEELGVSVKDVQAMVLGG 170

Query: 217 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 271
           H G T++PL         P     T+EE + +  R +NGG E+V      GSA  + A A
Sbjct: 171 H-GDTMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAA 228

Query: 272 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 321
             +  +A L+           L G+ G+ +          +P     V LG+ G E+I +
Sbjct: 229 IAEMVEAILKDKKRVLPCSAYLEGEYGIKDIFV------GVP-----VVLGKNGVEKIIE 277

Query: 322 LGPLNEYERIGLEKAKKELAGSI 344
           L  L + E+   +K+ + +   I
Sbjct: 278 L-DLTDEEKEAFDKSVESVKELI 299

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|180477 PRK06223, PRK06223, malate dehydrogenase; Reviewed

 Score =  158 bits (402), Expect = 6e-46
 Identities = 102/325 (31%), Positives = 169/325 (52%), Gaps = 44/325 (13%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 100
           K++I+GA G +G  LA L+ +  L  V+ L+D+V   P G   DI+     A V GF  +
Sbjct: 4   KISIIGA-GNVGATLAHLLALKELGDVV-LFDIVEGVPQGKALDIAEA---APVEGFDTK 58

Query: 101 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
               N    + G D+V+I AGVPRKPGM+RDDL  INA I++ + EGI K  P+A V ++
Sbjct: 59  ITGTNDYEDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVV 118

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           +NPV++   +A     K   +   +++G+  +LD  R  TF+AE L +  +DV   V+GG
Sbjct: 119 TNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFRTFIAEELNVSVKDVTAFVLGG 174

Query: 217 HAGVTILPLLSQ-----VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 271
           H G +++PL+       +      ++E+ + +  R + GG E+V      GSA  + A +
Sbjct: 175 H-GDSMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAAS 232

Query: 272 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 321
             +  +A L+           L G+ GV +          +P     V+LG+ G E+I +
Sbjct: 233 IAEMVEAILKDKKRVLPCSAYLEGEYGVKDVYV------GVP-----VKLGKNGVEKIIE 281

Query: 322 LGPLNEYERIGLEKAKKELAGSIQK 346
           L  L++ E+   +K+ + +   I+ 
Sbjct: 282 L-ELDDEEKAAFDKSVEAVKKLIEA 305

Length = 307

>gnl|CDD|133419 cd00650, LDH_MDH_like, NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

 Score =  131 bits (332), Expect = 3e-36
 Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 9/192 (4%)

Query: 44  VAILGAAGGIGQPLA--MLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG 99
           +A++GA G +G  LA  +      L   L LYD+      GV  D+              
Sbjct: 1   IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSI 60

Query: 100 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159
                 A    D+VII AGV RKPGM R DL   N  IV+ + + I K  P+A + ++SN
Sbjct: 61  TDDPYEAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSN 120

Query: 160 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAG 219
           PV+    I   +  +      +K++G+  LD +R    +AE LG+DP DV V ++G H G
Sbjct: 121 PVD----IITYLVWRYSGLPKEKVIGLGTLDPIRFRRILAEKLGVDPDDVKVYILGEHGG 176

Query: 220 VTILPLLSQVKP 231
            + +P  S V+ 
Sbjct: 177 -SQVPDWSTVRI 187

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 263

>gnl|CDD|173409 PTZ00117, PTZ00117, malate dehydrogenase; Provisional

 Score =  127 bits (320), Expect = 5e-34
 Identities = 95/305 (31%), Positives = 149/305 (48%), Gaps = 31/305 (10%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISH-MDTGAVVRGFLG 99
           K++++GA G IG  +A+L+    L  V+ LYDV+   P G   D+ H           LG
Sbjct: 7   KISMIGA-GQIGSTVALLILQKNLGDVV-LYDVIKGVPQGKALDLKHFSTLVGSNINILG 64

Query: 100 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159
               E  +   D+V+I AGV RK  MTR+DL  IN  I++++ E + K CPNA V  ++N
Sbjct: 65  TNNYE-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123

Query: 160 PVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPVVGGHA 218
           P++       +VF++       K+ G+  +LD  R    +AE LG+ P DV   V+GGH 
Sbjct: 124 PLD----CMVKVFQEKSGIPSNKICGMAGVLDSSRFRCNLAEKLGVSPGDVSAVVIGGH- 178

Query: 219 GVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 268
           G  ++PL         P   F      T++E   +  + +N G E+V+     GSA  + 
Sbjct: 179 GDLMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKL-LKKGSAFFAP 237

Query: 269 AYAAVKFADACLRGLRGDAGVVECAFVAS---QVTELPFFASKVRLGRQGAEEIFQLGPL 325
           A A V   +A L+  +    V+ C+   +       L F    V +G +G E++ +L  L
Sbjct: 238 AAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNL-FVGVPVVIGGKGIEKVIEL-EL 292

Query: 326 NEYER 330
           N  E+
Sbjct: 293 NAEEK 297

Length = 319

>gnl|CDD|173376 PTZ00082, PTZ00082, L-lactate dehydrogenase; Provisional

 Score =  121 bits (306), Expect = 7e-32
 Identities = 105/319 (32%), Positives = 172/319 (53%), Gaps = 36/319 (11%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVR-GFLG 99
           K++++G+ G IG  +A L+ +  L  V+ L+D+V N P G   DISH +  A      +G
Sbjct: 8   KISLIGS-GNIGGVMAYLIVLKNLGDVV-LFDIVKNIPQGKALDISHSNVIAGSNSKVIG 65

Query: 100 QPQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATV 154
               E+ + G D+VI+ AG+ ++PG +     RDDL  +NA I+  + EGI K CPNA V
Sbjct: 66  TNNYED-IAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFV 124

Query: 155 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPV 213
            +I+NP++  V    ++ ++       K+ G+  +LD  R  T++AE LG++PRDV   V
Sbjct: 125 IVITNPLDVMV----KLLQEHSGLPKNKVCGMAGVLDSSRLRTYIAEKLGVNPRDVHASV 180

Query: 214 VGGHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVEAKAGAGS 263
           +G H G  ++PL   V     P   F      TQEE + +  R +N G E+V+   G GS
Sbjct: 181 IGAH-GDKMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDL-LGTGS 238

Query: 264 ATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQ--VTELPFFASKVRLGRQGAEEIF 320
           A  + A AA++ A+A L+  +    V+ C A++  Q    ++ +  +   +G  G E+I 
Sbjct: 239 AYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDI-YMGTPAVIGANGVEKII 294

Query: 321 QLGPLNEYERIGLEKAKKE 339
           +L  L   E+   +++ KE
Sbjct: 295 EL-DLTPEEQKKFDESIKE 312

Length = 321

>gnl|CDD|133418 cd00300, LDH_like, L-lactate dehydrogenase-like enzymes

 Score =  120 bits (302), Expect = 1e-31
 Identities = 89/318 (27%), Positives = 140/318 (44%), Gaps = 44/318 (13%)

Query: 44  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRGF 97
           + I+GA G +G  +A  +    L S L L DV      G   D+SH      TG +VRG 
Sbjct: 1   ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG- 58

Query: 98  LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
                        D+V+I AG PRKPG TR DL N NA I+R++   + K  P+A + ++
Sbjct: 59  ----GDYADAADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVV 114

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           SNPV+    I   V +K       +++G  T+LD  R  + +AE L +DP+ V   V+G 
Sbjct: 115 SNPVD----ILTYVAQKLSGLPKNRVIGSGTLLDSARFRSLLAEKLDVDPQSVHAYVLGE 170

Query: 217 HAGVTILPLLSQVK-------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGA----GSAT 265
           H G + +   S              FT+ + E +   ++  G E++  K        +A 
Sbjct: 171 H-GDSQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIRLKGATNYGIATAI 229

Query: 266 LSMAYAAVKFADACL---RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 322
             +  + +      L       G  G+ + A        +P       +GR+G   I ++
Sbjct: 230 ADIVKSILLDERRVLPVSAVQEGQYGIEDVAL------SVP-----AVVGREGVVRILEI 278

Query: 323 GPLNEYERIGLEKAKKEL 340
            PL E E   L+K+ + L
Sbjct: 279 -PLTEDEEAKLQKSAEAL 295

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 300

>gnl|CDD|233562 TIGR01763, MalateDH_bact, malate dehydrogenase, NAD-dependent

 Score =  109 bits (274), Expect = 2e-27
 Identities = 89/313 (28%), Positives = 152/313 (48%), Gaps = 36/313 (11%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----L 98
           K++++GA G +G   A  +    L  ++ L DVV        +   +   V  GF     
Sbjct: 3   KISVIGA-GFVGATTAFRLAEKELADLV-LLDVVEGIPQGKALDMYEASPV-GGFDTKVT 59

Query: 99  GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158
           G     +     D+V+I AG+PRKPGM+R+DL ++NAGIVR +   I +  PN  + ++S
Sbjct: 60  GTNNYADT-ANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVS 118

Query: 159 NPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEVLGLDPRDVDVPVVGGH 217
           NP+++   +A +       +  ++++G   +LD  R  TF+A  LG+  +DV   V+GGH
Sbjct: 119 NPLDAMTYVAWQK----SGFPKERVIGQAGVLDSARFRTFIAMELGVSVQDVTACVLGGH 174

Query: 218 AGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS 267
            G  ++PL          ++ +        E    +  R + GG E+V      GSA  +
Sbjct: 175 -GDAMVPLVRYSTVAGIPVADLISA-----ERIAEIVERTRKGGGEIVNL-LKQGSAYYA 227

Query: 268 MAYAAVKFADACLRGLRGDAGVVEC-AFVASQV-TELPFFASKVRLGRQGAEEIFQLGPL 325
            A + V+  +A L+  +    V+ C A++  Q   +  +    V LG+ G E I++L  L
Sbjct: 228 PAASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KL 283

Query: 326 NEYERIGLEKAKK 338
           ++ E   L K+ K
Sbjct: 284 DQSELALLNKSAK 296

This enzyme converts malate into oxaloacetate in the citric acid cycle. The critical residues which discriminate malate dehydrogenase from lactate dehydrogenase have been characterized , and have been used to set the cutoffs for this model. Sequences showing [aflimv][ap]R[rk]pgM[st] and [ltv][ilm]gGhgd were kept above trusted, while those in which the capitalized residues in the patterns were found to be Q, E and E were kept below the noise cutoff. Some sequences in the grey zone have been annotated as malate dehydrogenases, but none have been characterized. Phylogenetically, a clade of sequences from eukaryotes such as Toxoplasma and Plasmodium which include a characterized lactate dehydrogenase and show abiguous critical residue patterns appears to be more closely related to these bacterial sequences than other eukaryotic sequences. These are relatively long branch and have been excluded from the model. All other sequences falling below trusted appear to be phylogenetically outside of the clade including the trusted hits. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable [Energy metabolism, TCA cycle]. Length = 305

>gnl|CDD|133430 cd05294, LDH-like_MDH_nadp, A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

 Score = 98.6 bits (246), Expect = 1e-23
 Identities = 66/243 (27%), Positives = 115/243 (47%), Gaps = 43/243 (17%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHL-----------------YDVVNTPGVTADI 85
           KV+I+GA+G +G   A+L+    +V  ++L                 YD +   G+ A+I
Sbjct: 2   KVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEI 61

Query: 86  SHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI 145
                 + V              G D+VII AGVPRK GM+R DL   NA IV+   + I
Sbjct: 62  KISSDLSDV-------------AGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQI 108

Query: 146 AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGL 204
           A+  P+  + +++NPV+     A    K++G +D  ++ G+ T LD +R    +A+   +
Sbjct: 109 AEFAPDTKILVVTNPVDVMTYKA---LKESG-FDKNRVFGLGTHLDSLRFKVAIAKHFNV 164

Query: 205 DPRDVDVPVVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEA 257
              +V   ++G H G +++PL+S        +K    +   + E +   ++N G  ++  
Sbjct: 165 HISEVHTRIIGEH-GDSMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIISL 223

Query: 258 KAG 260
           K G
Sbjct: 224 KGG 226

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)- binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 309

>gnl|CDD|233566 TIGR01771, L-LDH-NAD, L-lactate dehydrogenase

 Score = 95.0 bits (237), Expect = 2e-22
 Identities = 64/248 (25%), Positives = 111/248 (44%), Gaps = 26/248 (10%)

Query: 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 166
               DLV+I AG P+KPG TR +L   N  I++++   + K   +    + +NPV+    
Sbjct: 62  CKDADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVD---- 117

Query: 167 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPL 225
           I   V  K   +   +++G  T+LD  R    +AE LG+DP+ V   ++G H G + +P+
Sbjct: 118 ILTYVAWKLSGFPKNRVIGSGTVLDTARLRYLLAEKLGVDPQSVHAYIIGEH-GDSEVPV 176

Query: 226 LSQVK----PPCSF---TQEETEYLTNRI----QNGGTEVVEAKAGAGSATLSMAYAAVK 274
            S       P   +      ET+     I    ++   E++  K   G+    +  A  +
Sbjct: 177 WSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIINRK---GATYYGIGMAVAR 233

Query: 275 FADACLRGLRGDAGVVEC-AFVASQVTELPFFASKVR-LGRQGAEEIFQLGPLNEYERIG 332
             +A L        V+   A++  +      +      LGR G EEI +L PL++ E+  
Sbjct: 234 IVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEA 289

Query: 333 LEKAKKEL 340
            +K+ + L
Sbjct: 290 FQKSAETL 297

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases [Energy metabolism, Anaerobic, Energy metabolism, Glycolysis/gluconeogenesis]. Length = 299

>gnl|CDD|133427 cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

 Score = 90.6 bits (226), Expect = 1e-20
 Identities = 67/261 (25%), Positives = 110/261 (42%), Gaps = 47/261 (18%)

Query: 110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA 169
            D+V+I AG P+KPG TR DL   NA I++++   I     +    + SNPV+    +  
Sbjct: 69  ADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVD----VIT 124

Query: 170 EVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGH----------- 217
            V +K       +++G  T LD  R    +AE L +DPR V   V+G H           
Sbjct: 125 YVVQKLSGLPKNRVIGTGTSLDTARLRRALAEKLNVDPRSVHAYVLGEHGDSQFVAWSTV 184

Query: 218 --AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKF 275
              G  +L LL + K     ++ + + +   ++  G E++  K   G+    +A A  + 
Sbjct: 185 TVGGKPLLDLLKEGK----LSELDLDEIEEDVRKAGYEIINGK---GATYYGIATALARI 237

Query: 276 ADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPL 325
             A L            L G+ G  +            +      +GR G EE+ +L  L
Sbjct: 238 VKAILNDENAILPVSAYLDGEYGEKDV-----------YIGVPAIIGRNGVEEVIEL-DL 285

Query: 326 NEYERIGLEKAKKELAGSIQK 346
            E E+   EK+   +  +I+K
Sbjct: 286 TEEEQEKFEKSADIIKENIKK 306

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 306

>gnl|CDD|133420 cd00704, MDH, Malate dehydrogenase

 Score = 83.1 bits (206), Expect = 6e-18
 Identities = 72/262 (27%), Positives = 104/262 (39%), Gaps = 48/262 (18%)

Query: 43  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-- 93
            V I GAAG IG  L        +     P++  LHL D+         +  ++   +  
Sbjct: 2   HVLITGAAGQIGYNLLFLIASGELFGDDQPVI--LHLLDI------PPAMKALEGVVMEL 53

Query: 94  -------VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA 146
                  ++G +     E A   +D+ I+    PRKPGM R DL   NA I +   E + 
Sbjct: 54  QDCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALN 113

Query: 147 KCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLD 205
           K   P   V ++ NP N+   IA    K A    PK    +T LD  RA   VA  LG+ 
Sbjct: 114 KVAKPTVKVLVVGNPANTNALIAL---KNAPNLPPKNFTALTRLDHNRAKAQVARKLGVR 170

Query: 206 PRDV-DVPVVGGHAGVTILPLLSQ-------------VKPPCSFTQEETEYLTNRIQNGG 251
             DV +V + G H+  T +P LS                    +  +E       +Q  G
Sbjct: 171 VSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDE---FVKTVQKRG 226

Query: 252 TEVVEAKAGAGSATLSMAYAAV 273
             +++ + GA SA  S A A  
Sbjct: 227 AAIIKKR-GASSA-ASAAKAIA 246

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 323

>gnl|CDD|133428 cd05292, LDH_2, A subgroup of L-lactate dehydrogenases

 Score = 82.2 bits (204), Expect = 9e-18
 Identities = 92/330 (27%), Positives = 142/330 (43%), Gaps = 52/330 (15%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---DISH-MDTGAVVRGFL 98
           KVAI+GA G +G   A  + +  L S + L D+ N         D++H       VR + 
Sbjct: 2   KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDI-NKAKAEGEAMDLAHGTPFVKPVRIYA 59

Query: 99  GQPQ-LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
           G     + A    D+V+I AG  +KPG TR DL   N  I + +   I K  P+A + ++
Sbjct: 60  GDYADCKGA----DVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVV 115

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           +NPV+    +   V  K     P +++G  T+LD  R    + E LG+DPR V   ++G 
Sbjct: 116 TNPVD----VLTYVAYKLSGLPPNRVIGSGTVLDTARFRYLLGEHLGVDPRSVHAYIIGE 171

Query: 217 H-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA-- 261
           H              GV +         P  F +E  E +   ++N   E++E K GA  
Sbjct: 172 HGDSEVAVWSSANIGGVPLDEFCKLCGRP--FDEEVREEIFEEVRNAAYEIIERK-GATY 228

Query: 262 ---GSATLSMAYAAVKFADACL---RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQG 315
              G A   +  A ++  ++ L     L G  G+ + A        LP     V  GR G
Sbjct: 229 YAIGLALARIVEAILRDENSVLTVSSLLDGQYGIKDVAL------SLP---CIV--GRSG 277

Query: 316 AEEIFQLGPLNEYERIGLEKAKKELAGSIQ 345
            E +    PL+E E   L  + + L  +I+
Sbjct: 278 VERVLPP-PLSEEEEEALRASAEVLKEAIE 306

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 308

>gnl|CDD|130820 TIGR01759, MalateDH-SF1, malate dehydrogenase

 Score = 77.4 bits (191), Expect = 5e-16
 Identities = 90/324 (27%), Positives = 137/324 (42%), Gaps = 38/324 (11%)

Query: 43  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNT----PGVTADISHMDTG 91
           +VA+ GAAG IG  L        +  K  P+V  LHL D+        GV  ++   D  
Sbjct: 5   RVAVTGAAGQIGYSLLFRIASGELFGKDQPVV--LHLLDIPPAMKALEGVAMEL--EDCA 60

Query: 92  -AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC- 149
             ++ G +     E A   +D  ++    PRKPGM R DL + N  I +   + + K   
Sbjct: 61  FPLLAGVVATTDPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAK 120

Query: 150 PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 209
            +  V ++ NP N+   IA+   K A    PK    +T LD  RA   +A   G+   DV
Sbjct: 121 KDVKVLVVGNPANTNALIAS---KNAPDIPPKNFSAMTRLDHNRAKYQLAAKAGVPVSDV 177

Query: 210 -DVPVVGGHAGVTILPLLSQVK---PPCSFTQEETEYLTN----RIQNGGTEVVEAKAGA 261
            +V + G H+  T +P  +       P     ++ ++L       +Q  G  V+EA+ GA
Sbjct: 178 KNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIEAR-GA 235

Query: 262 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ-----VTELPFFASKVRLGRQGA 316
            SA  S A AA+      + G     G      V S      + E   F+  V     G 
Sbjct: 236 SSA-ASAANAAIDHVRDWVTGTP--EGDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGE 292

Query: 317 EEIFQLGPLNEYERIGLEKAKKEL 340
            EI +  PL+++ R  L+  + EL
Sbjct: 293 WEIVEGLPLDDFVRGKLDATEDEL 316

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. Length = 323

>gnl|CDD|133426 cd05290, LDH_3, A subgroup of L-lactate dehydrogenases

 Score = 73.9 bits (182), Expect = 6e-15
 Identities = 57/193 (29%), Positives = 82/193 (42%), Gaps = 31/193 (16%)

Query: 106 ALTGMDLVIIPAGVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 163
                D+++I AG    PG T  R DL   NA I+R +   I K    A + LI+NP++ 
Sbjct: 65  DCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDI 124

Query: 164 TVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 222
            V IAA  F     Y   K++G  TMLD  R    VA+  G+DP++V   V+G H G   
Sbjct: 125 AVYIAATEFD----YPANKVIGTGTMLDTARLRRIVADKYGVDPKNVTGYVLGEH-GSHA 179

Query: 223 LPLLSQV---------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS 267
            P+ S V               K P        + L   +     +V   K G  +A ++
Sbjct: 180 FPVWSLVNIAGLPLDELEALFGKEPID-----KDELLEEVVQAAYDVFNRK-GWTNAGIA 233

Query: 268 MAYAAVKFADACL 280
              +A +   A L
Sbjct: 234 K--SASRLIKAIL 244

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 307

>gnl|CDD|133429 cd05293, LDH_1, A subgroup of L-lactate dehydrogenases

 Score = 70.7 bits (174), Expect = 1e-13
 Identities = 82/337 (24%), Positives = 135/337 (40%), Gaps = 57/337 (16%)

Query: 41  GFKVAILGA-AGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF 97
             KV ++G    G+   +++L K   L   L L DVV     G   D+ H   G+    F
Sbjct: 3   RNKVTVVGVGQVGMACAISILAK--GLADELVLVDVVEDKLKGEAMDLQH---GSA---F 54

Query: 98  LGQPQLE-----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 152
           L  P++E     +      +VI+ AG  +  G +R DL   N  I + +   + K  PNA
Sbjct: 55  LKNPKIEADKDYSVTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNA 114

Query: 153 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV 211
            + ++SNPV+    I   V  K       +++G    LD  R    +AE LG+ P  V  
Sbjct: 115 ILLVVSNPVD----IMTYVAWKLSGLPKHRVIGSGCNLDSARFRYLIAERLGVAPSSVHG 170

Query: 212 PVVGGH--------AGVTI--LPLLSQVKPPCSFTQEETEY-LTNRIQNGGTEVVEAKAG 260
            ++G H        +GV +  + L        +    E    +  ++ +   EV++ K  
Sbjct: 171 WIIGEHGDSSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIKLK-- 228

Query: 261 AGSATLSMAYAAVKFADACLRGLR----------GDAGVVECAFVASQVTELPFFASKVR 310
            G  + ++  +     DA LR             G  G+ +  F++     LP       
Sbjct: 229 -GYTSWAIGLSVADLVDAILRNTGRVHSVSTLVKGLHGIEDEVFLS-----LP-----CI 277

Query: 311 LGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG 347
           LG  G   + +  PL E E+  L+K+   L   +QK 
Sbjct: 278 LGENGITHVIKQ-PLTEEEQEKLQKSADTLW-EVQKQ 312

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 312

>gnl|CDD|130819 TIGR01758, MDH_euk_cyt, malate dehydrogenase, NAD-dependent

 Score = 70.3 bits (172), Expect = 2e-13
 Identities = 69/254 (27%), Positives = 104/254 (40%), Gaps = 31/254 (12%)

Query: 43  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADISH--MDTG-A 92
           +V + GAAG IG  L        ML K  P++  LHL D+     V   +    MD    
Sbjct: 1   RVVVTGAAGQIGYALLPMIARGRMLGKDQPII--LHLLDIPPAMKVLEGVVMELMDCAFP 58

Query: 93  VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPN 151
           ++ G +       A T +D+ I+    PRK GM R DL + N  I +     + K    +
Sbjct: 59  LLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKD 118

Query: 152 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV-D 210
             V ++ NP N+   + +     A +  PK    +T LD  RA   VAE  G+   DV +
Sbjct: 119 CKVLVVGNPANTNALVLSNY---APSIPPKNFSALTRLDHNRALAQVAERAGVPVSDVKN 175

Query: 211 VPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR-----------IQNGGTEVVEAKA 259
           V + G H+  T  P ++         Q+                   +Q  G  ++ A+ 
Sbjct: 176 VIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR- 233

Query: 260 GAGSATLSMAYAAV 273
              S+ LS A AAV
Sbjct: 234 -KLSSALSAAKAAV 246

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography. Length = 324

>gnl|CDD|178836 PRK00066, ldh, L-lactate dehydrogenase; Reviewed

 Score = 68.0 bits (167), Expect = 7e-13
 Identities = 64/251 (25%), Positives = 107/251 (42%), Gaps = 36/251 (14%)

Query: 109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA 168
             DLV+I AG P+KPG TR DL   N  I +++   +     +    + SNPV+    I 
Sbjct: 73  DADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVD----IL 128

Query: 169 AEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGH---------- 217
                K   +  ++++G  T LD  R    ++E L +DPR V   ++G H          
Sbjct: 129 TYATWKLSGFPKERVIGSGTSLDSARFRYMLSEKLDVDPRSVHAYIIGEHGDTEFPVWSH 188

Query: 218 AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA- 276
           A V  +PL   ++    + +E+ + +   +++   E++E K GA    ++MA A +  A 
Sbjct: 189 ANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIEKK-GATYYGIAMALARITKAI 247

Query: 277 ----DACL---RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE 329
               +A L     L G  G  +            +      + R G  EI +L PLN+ E
Sbjct: 248 LNNENAVLPVSAYLEGQYGEEDV-----------YIGVPAVVNRNGIREIVEL-PLNDDE 295

Query: 330 RIGLEKAKKEL 340
           +     +   L
Sbjct: 296 KQKFAHSADVL 306

Length = 315

>gnl|CDD|178212 PLN02602, PLN02602, lactate dehydrogenase

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 82/326 (25%), Positives = 140/326 (42%), Gaps = 39/326 (11%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV--NTPGVTADISHMDTGAVVRGFLGQ 100
           KV+++G  G +G  +A  +    L   L L DV      G   D+ H         FL +
Sbjct: 39  KVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQH------AAAFLPR 91

Query: 101 PQL----ENALT-GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
            ++    + A+T G DL I+ AG  + PG +R +L   N  + R +   +AK  P+  + 
Sbjct: 92  TKILASTDYAVTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILL 151

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
           ++SNPV+    +A   +K +G +   +++G  T LD  R    +A+ L ++ +DV   +V
Sbjct: 152 IVSNPVDVLTYVA---WKLSG-FPANRVIGSGTNLDSSRFRFLIADHLDVNAQDVQAYIV 207

Query: 215 GGH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 261
           G H              GV +L  L   K   ++ +E  E +   + +   EV++ K   
Sbjct: 208 GEHGDSSVALWSSVSVGGVPVLSFLE--KQQIAYEKETLEEIHRAVVDSAYEVIKLK--- 262

Query: 262 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFAS-KVRLGRQGAEEIF 320
           G  + ++ Y+      + LR  R    V   A     + E   F S   +LGR G   + 
Sbjct: 263 GYTSWAIGYSVASLVRSLLRDQRRIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVV 322

Query: 321 QLGPLNEYERIGLEKAKKELAGSIQK 346
            +  L + E   L K+ K L     +
Sbjct: 323 NV-HLTDEEAERLRKSAKTLWEVQSQ 347

Length = 350

>gnl|CDD|133421 cd01336, MDH_cytoplasmic_cytosolic, Cytoplasmic and cytosolic Malate dehydrogenases

 Score = 64.2 bits (157), Expect = 2e-11
 Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 33/255 (12%)

Query: 43  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADIS-HMDTGA-- 92
           +V + GAAG I   L        +     P++  LHL D+         +   +   A  
Sbjct: 4   RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVI--LHLLDIPPALKALEGVVMELQDCAFP 61

Query: 93  VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PN 151
           +++  +     E A   +D+ I+   +PRK GM R DL   N  I +   E + K    N
Sbjct: 62  LLKSVVATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKN 121

Query: 152 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV-D 210
             V ++ NP N+   I     K A +   +    +T LD  RA + +A  LG+   DV +
Sbjct: 122 VKVLVVGNPANTNALILL---KYAPSIPKENFTALTRLDHNRAKSQIALKLGVPVSDVKN 178

Query: 211 VPVVGGHAGVTILPLLSQ--------VKPPCSFTQEETEYLTN----RIQNGGTEVVEAK 258
           V + G H+  T  P ++          KP     +++  +L       +Q  G  V++A+
Sbjct: 179 VIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDD-AWLNGEFISTVQKRGAAVIKAR 236

Query: 259 AGAGSATLSMAYAAV 273
               SA +S A A  
Sbjct: 237 -KLSSA-MSAAKAIC 249

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 325

>gnl|CDD|130817 TIGR01756, LDH_protist, lactate dehydrogenase

 Score = 60.3 bits (146), Expect = 3e-10
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 4/135 (2%)

Query: 96  GFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATV 154
           G +   +LE A   +D   + A VP KPG  R DL   N  I +   E +++   P   V
Sbjct: 47  GTIVTTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGEALSEYAKPTVKV 106

Query: 155 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV 214
            +I NPVN+   +A      A     +    + MLD  RA + +A  L +    +   VV
Sbjct: 107 LVIGNPVNTNCLVA---MLHAPKLSAENFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVV 163

Query: 215 GGHAGVTILPLLSQV 229
            G+   +++  L+  
Sbjct: 164 WGNHAESMVADLTHA 178

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule. Length = 313

>gnl|CDD|177744 PLN00135, PLN00135, malate dehydrogenase

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 17/175 (9%)

Query: 48  GAAGGIGQPLAM-LMKINPLVSVLHLYDVVNTPGVTADISHMDTG-AVVRGFLGQPQLEN 105
           G   G  QP+ + ++ I P    L+        GV  ++  +D    +++G +    +  
Sbjct: 5   GVMLGPDQPVILHMLDIPPAAEALN--------GVKMEL--IDAAFPLLKGVVATTDVVE 54

Query: 106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST 164
           A  G+++ ++  G PRK GM R D+ + N  I ++    + K   P+  V +++NP N+ 
Sbjct: 55  ACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPDCKVLVVANPANTN 114

Query: 165 VPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHA 218
             I  E    A +   K +  +T LD  RA   ++E LG+   DV +V + G H+
Sbjct: 115 ALILKEF---APSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHS 166

Length = 309

>gnl|CDD|133423 cd01338, MDH_choloroplast_like, Chloroplast-like malate dehydrogenases

 Score = 53.0 bits (128), Expect = 8e-08
 Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 31/252 (12%)

Query: 43  KVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTG 91
           +VA+ GAAG IG  L        M     P++  L L ++        GV  ++   +  
Sbjct: 4   RVAVTGAAGQIGYSLLFRIASGEMFGPDQPVI--LQLLELPQALKALEGVAMEL---EDC 58

Query: 92  A--VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-C 148
           A  ++   +       A    D  ++    PR PGM R DL   N  I     + +    
Sbjct: 59  AFPLLAEIVITDDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVA 118

Query: 149 CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRD 208
             +  V ++ NP N+   IA    K A    P     +T LD  RA + +A+  G+   D
Sbjct: 119 SRDVKVLVVGNPCNTNALIAM---KNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTD 175

Query: 209 VDVPVVGGHAGVTILPLLSQVK---PPCSFTQEETEYLTN----RIQNGGTEVVEAKAGA 261
           V   V+ G+   T  P  +       P +    +  +L +     +Q  G  +++A+ GA
Sbjct: 176 VKNMVIWGNHSPTQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIKAR-GA 234

Query: 262 GSATLSMAYAAV 273
            SA  S A AA+
Sbjct: 235 SSAA-SAANAAI 245

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. Length = 322

>gnl|CDD|235468 PRK05442, PRK05442, malate dehydrogenase; Provisional

 Score = 46.3 bits (111), Expect = 1e-05
 Identities = 68/253 (26%), Positives = 107/253 (42%), Gaps = 33/253 (13%)

Query: 43  KVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNTPGVTA---DISHMDTGA 92
           +VA+ GAAG IG  L        ML K  P++  L L ++   P + A    +  +D  A
Sbjct: 6   RVAVTGAAGQIGYSLLFRIASGDMLGKDQPVI--LQLLEI--PPALKALEGVVMELDDCA 61

Query: 93  --VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC- 149
             ++ G +       A    D+ ++    PR PGM R DL   N  I     + + +   
Sbjct: 62  FPLLAGVVITDDPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAA 121

Query: 150 PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 209
            +  V ++ NP N+   IA    K A     +    +T LD  RA + +A   G+   D+
Sbjct: 122 RDVKVLVVGNPANTNALIAM---KNAPDLPAENFTAMTRLDHNRALSQLAAKAGVPVADI 178

Query: 210 -DVPVVGGHAGVTILPLLSQV----KPPCSFTQEETEYLTN----RIQNGGTEVVEAKAG 260
             + V G H+  T  P         KP      ++  +L +     +Q  G  ++EA+ G
Sbjct: 179 KKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQ-AWLEDTFIPTVQKRGAAIIEAR-G 235

Query: 261 AGSATLSMAYAAV 273
           A SA  S A AA+
Sbjct: 236 ASSAA-SAANAAI 247

Length = 326

>gnl|CDD|215060 PLN00112, PLN00112, malate dehydrogenase (NADP); Provisional

 Score = 39.4 bits (92), Expect = 0.002
 Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 10/79 (12%)

Query: 120 PRKPGMTRDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA 175
           PR PGM R DL +IN  I     + L E +A    N  V ++ NP N+   I     K A
Sbjct: 187 PRGPGMERADLLDINGQIFAEQGKALNE-VAS--RNVKVIVVGNPCNTNALIC---LKNA 240

Query: 176 GTYDPKKLLGVTMLDVVRA 194
                K    +T LD  RA
Sbjct: 241 PNIPAKNFHALTRLDENRA 259

Length = 444

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	353
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	100.0
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	100.0
PLN00106	323	malate dehydrogenase	100.0
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	100.0
PTZ00325	321	malate dehydrogenase; Provisional	100.0
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	100.0
PRK05086	312	malate dehydrogenase; Provisional	100.0
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	100.0
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	100.0
KOG1495	332	consensus Lactate dehydrogenase [Energy production	100.0
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	100.0
PLN02602	350	lactate dehydrogenase	100.0
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	100.0
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	100.0
PRK05442	326	malate dehydrogenase; Provisional	100.0
PLN00112	444	malate dehydrogenase (NADP); Provisional	100.0
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	100.0
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	100.0
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	100.0
PTZ00117	319	malate dehydrogenase; Provisional	100.0
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	100.0
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	100.0
PTZ00082	321	L-lactate dehydrogenase; Provisional	100.0
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	100.0
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	100.0
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	100.0
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	100.0
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	100.0
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	100.0
PRK06223	307	malate dehydrogenase; Reviewed	100.0
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	100.0
PLN00135	309	malate dehydrogenase	100.0
TIGR01756	313	LDH_protist lactate dehydrogenase. This model repr	100.0
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	100.0
KOG1496	332	consensus Malate dehydrogenase [Energy production	100.0
PF02866	174	Ldh_1_C: lactate/malate dehydrogenase, alpha/beta	100.0
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	99.97
PRK15076	431	alpha-galactosidase; Provisional	99.97
cd05197	425	GH4_glycoside_hydrolases Glycoside Hydrases Family	99.97
cd05296	419	GH4_P_beta_glucosidase Glycoside Hydrolases Family	99.97
cd05298	437	GH4_GlvA_pagL_like Glycoside Hydrolases Family 4;	99.96
cd05297	423	GH4_alpha_glucosidase_galactosidase Glycoside Hydr	99.94
COG1486	442	CelF Alpha-galactosidases/6-phospho-beta-glucosida	99.94
PF02056	183	Glyco_hydro_4: Family 4 glycosyl hydrolase; InterP	99.82
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	98.91
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	98.81
COG1250	307	FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabo	98.76
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	98.7
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	98.68
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.63
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	98.58
PRK11730	715	fadB multifunctional fatty acid oxidation complex	98.57
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.54
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	98.5
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	98.49
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.48
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.47
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	98.44
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.43
KOG2304	298	consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t	98.41
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	98.39
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	98.35
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	98.35
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.32
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	98.32
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.32
PLN02427	386	UDP-apiose/xylose synthase	98.25
PLN02353	473	probable UDP-glucose 6-dehydrogenase	98.24
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.21
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	98.21
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	98.18
PLN02650	351	dihydroflavonol-4-reductase	98.18
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	98.17
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.16
PLN00198	338	anthocyanidin reductase; Provisional	98.15
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	98.14
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	98.13
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.12
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	98.12
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.11
PLN02206	442	UDP-glucuronate decarboxylase	98.1
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	98.09
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	98.07
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.07
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	98.07
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	98.07
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	98.06
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	97.99
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	97.97
CHL00194	317	ycf39 Ycf39; Provisional	97.96
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	97.94
PLN02214	342	cinnamoyl-CoA reductase	97.94
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	97.93
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.92
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	97.92
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	97.91
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	97.91
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	97.9
PLN02260	668	probable rhamnose biosynthetic enzyme	97.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	97.85
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	97.84
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	97.83
PLN02572	442	UDP-sulfoquinovose synthase	97.83
PLN02778	298	3,5-epimerase/4-reductase	97.82
PRK10675	338	UDP-galactose-4-epimerase; Provisional	97.82
PRK06194	287	hypothetical protein; Provisional	97.81
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	97.78
PLN02896	353	cinnamyl-alcohol dehydrogenase	97.78
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	97.78
PLN03209	576	translocon at the inner envelope of chloroplast su	97.77
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	97.76
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	97.76
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.7
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	97.7
PLN02583	297	cinnamoyl-CoA reductase	97.68
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	97.66
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	97.65
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	97.65
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.64
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.63
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	97.63
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.63
PLN02653	340	GDP-mannose 4,6-dehydratase	97.62
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	97.62
PLN02686	367	cinnamoyl-CoA reductase	97.57
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.57
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.56
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	97.55
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	97.54
PRK07201	657	short chain dehydrogenase; Provisional	97.53
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	97.5
PLN02253	280	xanthoxin dehydrogenase	97.49
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.47
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	97.46
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	97.45
PLN02240	352	UDP-glucose 4-epimerase	97.44
PRK08267	260	short chain dehydrogenase; Provisional	97.43
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	97.42
PRK07417	279	arogenate dehydrogenase; Reviewed	97.41
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	97.41
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	97.4
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	97.38
PRK12829	264	short chain dehydrogenase; Provisional	97.37
PRK08643	256	acetoin reductase; Validated	97.35
PRK07102	243	short chain dehydrogenase; Provisional	97.34
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.34
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.33
PRK12320	699	hypothetical protein; Provisional	97.31
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	97.3
PRK05717	255	oxidoreductase; Validated	97.3
PRK05866	293	short chain dehydrogenase; Provisional	97.3
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.3
PRK07067	257	sorbitol dehydrogenase; Provisional	97.29
PRK05865	854	hypothetical protein; Provisional	97.29
PRK14982	340	acyl-ACP reductase; Provisional	97.28
PRK07523	255	gluconate 5-dehydrogenase; Provisional	97.27
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	97.27
PRK08269	314	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.27
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.27
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	97.25
PRK07326	237	short chain dehydrogenase; Provisional	97.23
PRK08655	437	prephenate dehydrogenase; Provisional	97.23
PLN02688	266	pyrroline-5-carboxylate reductase	97.22
PRK10538	248	malonic semialdehyde reductase; Provisional	97.21
PRK07680	273	late competence protein ComER; Validated	97.21
PRK06482	276	short chain dehydrogenase; Provisional	97.17
PRK12937	245	short chain dehydrogenase; Provisional	97.17
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	97.16
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.16
PRK07814	263	short chain dehydrogenase; Provisional	97.15
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.15
PRK06180	277	short chain dehydrogenase; Provisional	97.13
PRK09135	249	pteridine reductase; Provisional	97.13
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	97.12
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	97.11
PRK06924	251	short chain dehydrogenase; Provisional	97.11
PRK07069	251	short chain dehydrogenase; Validated	97.11
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	97.11
PRK05875	276	short chain dehydrogenase; Provisional	97.11
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	97.11
PRK06914	280	short chain dehydrogenase; Provisional	97.11
PRK08340	259	glucose-1-dehydrogenase; Provisional	97.1
PRK12828	239	short chain dehydrogenase; Provisional	97.09
PRK05855	582	short chain dehydrogenase; Validated	97.09
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	97.09
PRK05876	275	short chain dehydrogenase; Provisional	97.09
PRK12827	249	short chain dehydrogenase; Provisional	97.09
PRK07806	248	short chain dehydrogenase; Provisional	97.09
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.08
PRK08278	273	short chain dehydrogenase; Provisional	97.08
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	97.07
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	97.06
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	97.05
PRK06172	253	short chain dehydrogenase; Provisional	97.05
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.05
PRK07576	264	short chain dehydrogenase; Provisional	97.05
PRK08265	261	short chain dehydrogenase; Provisional	97.03
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	97.03
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	97.03
PRK07832	272	short chain dehydrogenase; Provisional	97.03
TIGR01746	367	Thioester-redct thioester reductase domain. It has	97.02
PRK07063	260	short chain dehydrogenase; Provisional	97.02
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	97.01
PRK06181	263	short chain dehydrogenase; Provisional	97.0
PLN02996	491	fatty acyl-CoA reductase	97.0
PRK06545	359	prephenate dehydrogenase; Validated	97.0
PRK12939	250	short chain dehydrogenase; Provisional	96.99
PRK07024	257	short chain dehydrogenase; Provisional	96.97
PRK06841	255	short chain dehydrogenase; Provisional	96.97
PRK06124	256	gluconate 5-dehydrogenase; Provisional	96.97
PF11975	232	Glyco_hydro_4C: Family 4 glycosyl hydrolase C-term	96.97
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	96.95
PRK07856	252	short chain dehydrogenase; Provisional	96.95
PRK07890	258	short chain dehydrogenase; Provisional	96.95
PRK06500	249	short chain dehydrogenase; Provisional	96.93
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	96.92
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	96.92
PRK06101	240	short chain dehydrogenase; Provisional	96.91
PRK08507	275	prephenate dehydrogenase; Validated	96.9
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	96.88
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	96.88
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	96.88
PRK06182	273	short chain dehydrogenase; Validated	96.88
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	96.88
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	96.87
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	96.87
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	96.86
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	96.86
PRK12480	330	D-lactate dehydrogenase; Provisional	96.86
PRK12746	254	short chain dehydrogenase; Provisional	96.85
PRK08213	259	gluconate 5-dehydrogenase; Provisional	96.85
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	96.85
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.84
PRK06138	252	short chain dehydrogenase; Provisional	96.84
PRK06128	300	oxidoreductase; Provisional	96.83
PRK07774	250	short chain dehydrogenase; Provisional	96.83
PRK08263	275	short chain dehydrogenase; Provisional	96.82
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	96.82
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	96.82
PRK06701	290	short chain dehydrogenase; Provisional	96.81
PLN02260	668	probable rhamnose biosynthetic enzyme	96.8
PRK12935	247	acetoacetyl-CoA reductase; Provisional	96.8
PRK06179	270	short chain dehydrogenase; Provisional	96.8
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.78
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	96.78
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	96.78
PLN02780	320	ketoreductase/ oxidoreductase	96.77
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.77
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.76
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.74
PRK05854	313	short chain dehydrogenase; Provisional	96.73
PRK09291	257	short chain dehydrogenase; Provisional	96.72
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	96.72
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	96.71
PLN02256	304	arogenate dehydrogenase	96.71
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.71
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	96.7
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.7
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.7
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.7
PRK07825	273	short chain dehydrogenase; Provisional	96.7
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.7
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	96.7
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.69
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.69
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	96.69
PRK09242	257	tropinone reductase; Provisional	96.69
PRK05650	270	short chain dehydrogenase; Provisional	96.69
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	96.68
PRK08251	248	short chain dehydrogenase; Provisional	96.68
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	96.67
PRK08589	272	short chain dehydrogenase; Validated	96.67
PRK09072	263	short chain dehydrogenase; Provisional	96.65
KOG2305	313	consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid t	96.64
PRK07097	265	gluconate 5-dehydrogenase; Provisional	96.62
PRK06949	258	short chain dehydrogenase; Provisional	96.62
PRK12742	237	oxidoreductase; Provisional	96.61
PRK12367	245	short chain dehydrogenase; Provisional	96.61
PRK08277	278	D-mannonate oxidoreductase; Provisional	96.6
PRK08226	263	short chain dehydrogenase; Provisional	96.59
TIGR02415	254	23BDH acetoin reductases. One member of this famil	96.58
PRK06197	306	short chain dehydrogenase; Provisional	96.57
PRK05993	277	short chain dehydrogenase; Provisional	96.57
PRK07985	294	oxidoreductase; Provisional	96.56
PRK06523	260	short chain dehydrogenase; Provisional	96.56
PRK06398	258	aldose dehydrogenase; Validated	96.56
PRK08628	258	short chain dehydrogenase; Provisional	96.55
PRK08264	238	short chain dehydrogenase; Validated	96.55
PRK12747	252	short chain dehydrogenase; Provisional	96.55
PRK08339	263	short chain dehydrogenase; Provisional	96.53
PRK07023	243	short chain dehydrogenase; Provisional	96.53
PRK09186	256	flagellin modification protein A; Provisional	96.53
PRK12744	257	short chain dehydrogenase; Provisional	96.52
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	96.52
PRK08936	261	glucose-1-dehydrogenase; Provisional	96.52
PRK07478	254	short chain dehydrogenase; Provisional	96.52
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.5
PRK12743	256	oxidoreductase; Provisional	96.5
PRK13243	333	glyoxylate reductase; Reviewed	96.5
PRK05884	223	short chain dehydrogenase; Provisional	96.49
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.49
PRK07035	252	short chain dehydrogenase; Provisional	96.48
PRK07074	257	short chain dehydrogenase; Provisional	96.47
PRK05693	274	short chain dehydrogenase; Provisional	96.46
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	96.46
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	96.46
PRK05479	330	ketol-acid reductoisomerase; Provisional	96.45
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.45
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.45
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	96.44
PRK06196	315	oxidoreductase; Provisional	96.44
PRK06198	260	short chain dehydrogenase; Provisional	96.44
PRK06057	255	short chain dehydrogenase; Provisional	96.43
PRK15059	292	tartronate semialdehyde reductase; Provisional	96.42
PRK09009	235	C factor cell-cell signaling protein; Provisional	96.42
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.42
PRK07574	385	formate dehydrogenase; Provisional	96.42
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.4
PRK08219	227	short chain dehydrogenase; Provisional	96.4
PRK06139	330	short chain dehydrogenase; Provisional	96.39
PLN00016	378	RNA-binding protein; Provisional	96.39
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	96.39
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.38
PRK07109	334	short chain dehydrogenase; Provisional	96.38
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	96.38
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.38
PRK07831	262	short chain dehydrogenase; Provisional	96.38
PRK07454	241	short chain dehydrogenase; Provisional	96.37
PRK06947	248	glucose-1-dehydrogenase; Provisional	96.36
PRK07060	245	short chain dehydrogenase; Provisional	96.36
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.34
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	96.33
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.33
PRK08703	239	short chain dehydrogenase; Provisional	96.33
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.32
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.31
PRK06123	248	short chain dehydrogenase; Provisional	96.31
COG2910	211	Putative NADH-flavin reductase [General function p	96.31
PTZ00431	260	pyrroline carboxylate reductase; Provisional	96.3
PRK14806	735	bifunctional cyclohexadienyl dehydrogenase/ 3-phos	96.29
PRK08818	370	prephenate dehydrogenase; Provisional	96.29
PLN02712	667	arogenate dehydrogenase	96.28
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.27
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.26
PRK05867	253	short chain dehydrogenase; Provisional	96.25
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	96.25
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.24
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.23
PLN03139	386	formate dehydrogenase; Provisional	96.2
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.2
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	96.2
cd05312	279	NAD_bind_1_malic_enz NAD(P) binding domain of mali	96.2
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	96.19
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.18
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	96.17
PRK08324	681	short chain dehydrogenase; Validated	96.17
PRK09134	258	short chain dehydrogenase; Provisional	96.17
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.17
PRK07904	253	short chain dehydrogenase; Provisional	96.17
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	96.16
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	96.16
PF03949	255	Malic_M: Malic enzyme, NAD binding domain; InterPr	96.14
PRK08177	225	short chain dehydrogenase; Provisional	96.14
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.14
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.13
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	96.11
PRK07201	657	short chain dehydrogenase; Provisional	96.1
PRK07677	252	short chain dehydrogenase; Provisional	96.09
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	96.09
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.08
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.07
PRK12824	245	acetoacetyl-CoA reductase; Provisional	96.05
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.05
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.05
PRK08605	332	D-lactate dehydrogenase; Validated	96.03
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.02
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.02
PRK08223	287	hypothetical protein; Validated	96.01
PRK06114	254	short chain dehydrogenase; Provisional	96.01
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.0
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.98
PRK07775	274	short chain dehydrogenase; Provisional	95.98
KOG2666	481	consensus UDP-glucose/GDP-mannose dehydrogenase [C	95.95
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.94
PLN02928	347	oxidoreductase family protein	95.94
PLN02503	605	fatty acyl-CoA reductase 2	95.94
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	95.94
PRK07062	265	short chain dehydrogenase; Provisional	95.93
PRK05872	296	short chain dehydrogenase; Provisional	95.92
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.9
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	95.9
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.89
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.88
PRK07578	199	short chain dehydrogenase; Provisional	95.86
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.84
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	95.84
PRK07577	234	short chain dehydrogenase; Provisional	95.82
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.82
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	95.81
PRK06484	520	short chain dehydrogenase; Validated	95.81
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.81
PLN02712	667	arogenate dehydrogenase	95.8
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	95.8
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.77
cd00762	254	NAD_bind_malic_enz NAD(P) binding domain of malic	95.77
PRK08291	330	ectoine utilization protein EutC; Validated	95.74
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.74
PRK06953	222	short chain dehydrogenase; Provisional	95.73
TIGR02371	325	ala_DH_arch alanine dehydrogenase, Archaeoglobus f	95.71
PRK05599	246	hypothetical protein; Provisional	95.7
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	95.65
PRK06484	520	short chain dehydrogenase; Validated	95.64
PRK06483	236	dihydromonapterin reductase; Provisional	95.61
PRK06125	259	short chain dehydrogenase; Provisional	95.61
PRK08618	325	ornithine cyclodeaminase; Validated	95.6
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	95.58
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.57
PRK00048	257	dihydrodipicolinate reductase; Provisional	95.55
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.53
PRK09496	453	trkA potassium transporter peripheral membrane com	95.53
PRK03659	601	glutathione-regulated potassium-efflux system prot	95.53
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	95.53
PRK06940	275	short chain dehydrogenase; Provisional	95.52
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.52
PLN02383	344	aspartate semialdehyde dehydrogenase	95.46
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	95.44
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.44
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	95.44
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	95.43
PRK07340	304	ornithine cyclodeaminase; Validated	95.42
PF02423	313	OCD_Mu_crystall: Ornithine cyclodeaminase/mu-cryst	95.4
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.37
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	95.36
PRK06407	301	ornithine cyclodeaminase; Provisional	95.35
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.32
TIGR01327	525	PGDH D-3-phosphoglycerate dehydrogenase. This mode	95.31
PRK06141	314	ornithine cyclodeaminase; Validated	95.3
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.3
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.29
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	95.29
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.22
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	95.19
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.18
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	95.14
PLN02494	477	adenosylhomocysteinase	95.14
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	95.09
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	95.09
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	95.07
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	95.06
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	95.05
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.05
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	95.05
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	95.03
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	94.98
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	94.94
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.93
PRK07041	230	short chain dehydrogenase; Provisional	94.87
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	94.86
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	94.86
PRK06823	315	ornithine cyclodeaminase; Validated	94.83
PRK08017	256	oxidoreductase; Provisional	94.81
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.79
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	94.79
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	94.77
KOG2711	372	consensus Glycerol-3-phosphate dehydrogenase/dihyd	94.76
PRK07589	346	ornithine cyclodeaminase; Validated	94.75
PRK08303	305	short chain dehydrogenase; Provisional	94.74
PRK07411	390	hypothetical protein; Validated	94.73
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	94.69
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	94.69
PRK12557	342	H(2)-dependent methylenetetrahydromethanopterin de	94.67
PF03059	276	NAS: Nicotianamine synthase protein; InterPro: IPR	94.66
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	94.66
PRK08862	227	short chain dehydrogenase; Provisional	94.65
PRK07877	722	hypothetical protein; Provisional	94.6
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	94.59
PLN00203	519	glutamyl-tRNA reductase	94.59
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.56
PRK06436	303	glycerate dehydrogenase; Provisional	94.55
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	94.54
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.53
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	94.5
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.43
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.4
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	94.39
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.38
PRK13940	414	glutamyl-tRNA reductase; Provisional	94.36
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	94.36
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	94.36
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	94.36
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	94.33
TIGR03736	244	PRTRC_ThiF PRTRC system ThiF family protein. A nov	94.3
PLN02306	386	hydroxypyruvate reductase	94.28
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	94.28
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	94.23
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	94.22
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.18
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.17
PRK06046	326	alanine dehydrogenase; Validated	94.17

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=8.5e-68  Score=503.75  Aligned_cols=310  Identities=59%  Similarity=0.952  Sum_probs=282.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRK  122 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~  122 (353)
                      ||+||||+|+||+++|+.|+.+++++||+|+|++++.|+++||+|......+..+.+.+|++++++|||+||+++|.|++
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~~   80 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPRK   80 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCCC
Confidence            79999999999999999999999999999999988889999999977433455422223567899999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHh
Q 018618          123 PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       123 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      +|++|.|++..|+++++++++.|.+++|++++|++|||+|++++++++++++.+++|++||||+|.||++|+++++|+++
T Consensus        81 ~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsNPvDv~~~i~t~~~~~~sg~p~~rViG~g~LDsaR~r~~la~~l  160 (312)
T TIGR01772        81 PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITNPVNSTVPIAAEVLKKKGVYDPNKLFGVTTLDIVRANTFVAELK  160 (312)
T ss_pred             CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecCchhhHHHHHHHHHHHhcCCChHHEEeeecchHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999999999999889999999999999999997799999999999999


Q ss_pred             CCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHHHhc
Q 018618          203 GLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG  282 (353)
Q Consensus       203 ~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~  282 (353)
                      |+++++|+++||||||+++++|+||++++...++++++++|.+++++++++|++.++|||+++||+|.++++++++|+++
T Consensus       161 ~v~~~~v~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~ia~a~~~iv~ail~~  240 (312)
T TIGR01772       161 GKDPMEVNVPVIGGHSGETIIPLISQCPGKVLFTEDQLEALIHRIQNAGTEVVKAKAGAGSATLSMAFAGARFVLSLVRG  240 (312)
T ss_pred             CCCHHHeEEEEEEecCCCccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCccCCCChhHHHHHHHHHHHHHHHHh
Confidence            99999999999999986699999999986444666668999999999999999976678999999999999999999975


Q ss_pred             cCCCCeEEEeeeeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018618          283 LRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK  352 (353)
Q Consensus       283 ~~~~~~v~~~~~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~  352 (353)
                      ..+++.++|+++++|+| .+++|||+||++|++|+++++++++||++|+++|++|++.|++.++.|++|++
T Consensus       241 ~~d~~~v~~~s~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~g~~~~~  311 (312)
T TIGR01772       241 LKGEEGVVECAYVESDGVTEATFFATPLLLGKNGVEKRLGIGKLSSFEEKMLNGALPELKKNIKKGEEFVA  311 (312)
T ss_pred             hCCCccEEEEEEEccCCCcCceEEEEEEEEcCCeeEEEEccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            44344688988999998 78999999999999999999995489999999999999999999999999986

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=100.00  E-value=1e-67  Score=502.32  Aligned_cols=309  Identities=68%  Similarity=1.075  Sum_probs=281.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||+||||+|+||+++|+.|+.+++++||+|+|++.++|+++||+|+.....++.+.+++|++++++|||+||+|+|.|+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~~   80 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVPR   80 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCCC
Confidence            69999999899999999999999999999999998678999999999744456653233566799999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHH
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV  201 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~  201 (353)
                      +||++|.|++..|+++++++++.|.+++|++|+|++|||+|++|+++++++++.+++|++||+|+|.||++|+++++|++
T Consensus        81 k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s~~p~~rviG~~~LDs~R~~~~la~~  160 (310)
T cd01337          81 KPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAGVYDPKRLFGVTTLDVVRANTFVAEL  160 (310)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhcCCCHHHEEeeechHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998999999999999999999889999999999999


Q ss_pred             hCCCCCCCcceEEeec-CCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHHH
Q 018618          202 LGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL  280 (353)
Q Consensus       202 l~v~~~~v~~~viG~h-g~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~  280 (353)
                      +|+++++|+++||||| |+ +++|+||++.+...++++++++|.+++++++++|++.|.|||+++||+|.++++++++|+
T Consensus       161 l~v~~~~V~~~v~GeHsGd-s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~gkg~t~~~~a~a~~~iv~aIl  239 (310)
T cd01337         161 LGLDPAKVNVPVIGGHSGV-TILPLLSQCQPPFTFDQEEIEALTHRIQFGGDEVVKAKAGAGSATLSMAYAGARFANSLL  239 (310)
T ss_pred             hCcCHHHEEEEEEecCCCC-ceecccccccccccCCHHHHHHHHHHHHHHHHHHHhCccCCCCcchhHHHHHHHHHHHHH
Confidence            9999999999999999 78 999999999875456666689999999999999999766789999999999999999999


Q ss_pred             hccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018618          281 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFS  351 (353)
Q Consensus       281 ~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~  351 (353)
                      +|+.+++.+++|++++|+-.+++|||+||++|++|+++++++++|+++|+++|++|++.|++.++.|++|+
T Consensus       240 ~~~~~~~~~~~~s~~~~~g~~~v~~s~P~~ig~~Gv~~i~~l~~L~~~E~~~l~~S~~~i~~~~~~g~~~~  310 (310)
T cd01337         240 RGLKGEKGVIECAYVESDVTEAPFFATPVELGKNGVEKNLGLGKLNDYEKKLLEAALPELKKNIEKGVDFV  310 (310)
T ss_pred             HhcCCCcceEEEEEEeccCCCceEEEEEEEEeCCeEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhhhcccC
Confidence            88665556778887766535689999999999999999999525999999999999999999999999884

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00106 malate dehydrogenase

Probab=100.00  E-value=9.2e-66  Score=491.55  Aligned_cols=317  Identities=78%  Similarity=1.198  Sum_probs=288.7

Q ss_pred             hhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC
Q 018618           29 RQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT  108 (353)
Q Consensus        29 ~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~  108 (353)
                      +-+.||++++.++.||+||||+|+||+++++.|+.++++.||+|+|+++++++++||.|+.....+..+..++|++++++
T Consensus         6 ~~~~~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~   85 (323)
T PLN00106          6 SLRACRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALK   85 (323)
T ss_pred             hhhccccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcC
Confidence            34789999999999999999999999999999999999999999999888889999999876445655445678889999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeech
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM  188 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~  188 (353)
                      |||+||+++|.|+++|++|.|++..|.++++++++.+++++|+++++++|||+|.+++++++++++.+++||+|+||+|.
T Consensus        86 ~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~  165 (323)
T PLN00106         86 GADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTT  165 (323)
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEec
Confidence            99999999999999999999999999999999999999999999999999999977777777778999999999999988


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchH
Q 018618          189 LDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM  268 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~  268 (353)
                      ||++|+++++|+++|+++.+|+++|+|+||+++++|+||++++...++++++++|.+++++++++|++.+.|||+++||+
T Consensus       166 LDs~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~~~  245 (323)
T PLN00106        166 LDVVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLLSQATPKVSFTDEEIEALTKRIQNGGTEVVEAKAGAGSATLSM  245 (323)
T ss_pred             chHHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeehhcceecccCCHHHHHHHHHHHHHHHHHHHhCccCCCCchHHH
Confidence            99999999999999999999999999999766999999999764446666799999999999999999755689999999


Q ss_pred             HHHHHHHHHHHHhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018618          269 AYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  345 (353)
Q Consensus       269 A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~  345 (353)
                      |.++++++++|++++++++.++||++++++|.+++|||+||+||++|+++++++++|+++|+++|++|++.|++.++
T Consensus       246 a~a~~~ii~ail~~~~~~~~v~~~s~~~~~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~  322 (323)
T PLN00106        246 AYAAARFADACLRGLNGEADVVECSYVQSEVTELPFFASKVRLGRNGVEEVLGLGPLSEYEQKGLEALKPELKASIE  322 (323)
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEEEECcccCCceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence            99999999999998776667999998777764349999999999999999999559999999999999999998775

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=6e-66  Score=485.40  Aligned_cols=297  Identities=38%  Similarity=0.584  Sum_probs=270.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +||+|||| |+||+++++.|+..++.+|++|+|+++  ++|.++||.|+.+.  ...+.. .+.| +++++|||+||++|
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~-~~~~-y~~~~~aDiVvitA   77 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKIT-GDGD-YEDLKGADIVVITA   77 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEe-cCCC-hhhhcCCCEEEEeC
Confidence            59999999 999999999998788888999999996  89999999999753  234443 2245 48899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHH
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  196 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~  196 (353)
                      |.||+|||+|.|++..|+.|++++++++.++|||++++++|||+|++||++    ++.+++|++|+||+ |.||++||++
T Consensus        78 G~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~----~k~sg~p~~rvig~gt~LDsaR~~~  153 (313)
T COG0039          78 GVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIA----MKFSGFPKNRVIGSGTVLDSARFRT  153 (313)
T ss_pred             CCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHH----HHhcCCCccceecccchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998765    78899999999999 9999999999


Q ss_pred             HHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----C----CChHHHHHHHHHHhcchhhhhhhhccCCcccchH
Q 018618          197 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S----FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM  268 (353)
Q Consensus       197 ~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~----~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~  268 (353)
                      ++|+++|+++++|+++|+|+||+ +++|+||++++.+    +    .+++++++|.++++++|++|++.| |.| ++||+
T Consensus       154 ~lae~~~v~~~~V~~~ViGeHGd-t~vp~~S~a~v~G~pl~~~~~~~~~~~~~~i~~~v~~~g~eII~~k-G~~-t~~~~  230 (313)
T COG0039         154 FLAEKLGVSPKDVHAYVIGEHGD-TMVPLWSQATVGGKPLEELLKEDTEEDLEELIERVRNAGAEIIEAK-GAG-TYYGP  230 (313)
T ss_pred             HHHHHhCCChhHceeeEeccCCC-ceEEeeeeeeECCEEHHHHhhcccHhHHHHHHHHHHhhHHHHHHcc-Ccc-chhhH
Confidence            99999999999999999999999 9999999999753    1    234567899999999999999976 444 99999


Q ss_pred             HHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018618          269 AYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  346 (353)
Q Consensus       269 A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~  346 (353)
                      |.|+++++++|++|++   .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++||++|+.|++.|++.++.
T Consensus       231 A~a~a~~~~ail~d~~---~vl~~s~~l~G~yg~~dv~~gvP~~lg~~Gv~~iie~-~l~~~E~~~l~~s~~~lk~~i~~  306 (313)
T COG0039         231 AAALARMVEAILRDEK---RVLPVSVYLDGEYGVEDVYFGVPAVLGKNGVEEILEL-LLSDDEQEKLDKSAEELKKNIEL  306 (313)
T ss_pred             HHHHHHHHHHHHcCCC---ceEEEEEeecCccCcCCeEEEeeEEEcCCCcEEEecC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999974   588887 899999 88999999999999999999996 99999999999999999999999


Q ss_pred             hhhhhc
Q 018618          347 GISFSK  352 (353)
Q Consensus       347 ~~~~~~  352 (353)
                      +.++++
T Consensus       307 ~~~~~~  312 (313)
T COG0039         307 VKELVL  312 (313)
T ss_pred             HHHhhc
Confidence            988764

>PTZ00325 malate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-62  Score=470.08  Aligned_cols=313  Identities=61%  Similarity=0.968  Sum_probs=280.3

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      -++.||+||||+|+||+++++.|+..+.+.||+|+|++.++++++||.|......+..+....+++++++|||+||+++|
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVitaG   85 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICAG   85 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECCC
Confidence            45679999999899999999999988999999999995589999999998653344433222344689999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV  198 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~l  198 (353)
                      .++++|++|.+++..|+++++++++.|++++|+++|+++|||+|.+++++.+.+++.+++||+|+||++.||++||++++
T Consensus        86 ~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~R~r~~l  165 (321)
T PTZ00325         86 VPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVVRARKFV  165 (321)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999886544568899999999999779999999999


Q ss_pred             HHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHH
Q 018618          199 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA  278 (353)
Q Consensus       199 A~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~a  278 (353)
                      |+++|++|++|+++||||||+.+++|+||++..  .+++++++++.+++++++++|++.|.|||+|+||+|.++++++++
T Consensus       166 a~~l~v~~~~V~~~VlGeHGd~s~v~~~S~~g~--~l~~~~~~~i~~~v~~~g~~Ii~~k~~kg~t~~g~a~a~~~i~~a  243 (321)
T PTZ00325        166 AEALGMNPYDVNVPVVGGHSGVTIVPLLSQTGL--SLPEEQVEQITHRVQVGGDEVVKAKEGAGSATLSMAYAAAEWSTS  243 (321)
T ss_pred             HHHhCcChhheEEEEEeecCCcccccchhccCC--CCCHHHHHHHHHHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHH
Confidence            999999999999999999998459999999943  466777999999999999999997656799999999999999999


Q ss_pred             HHhccCCCCeEEEeeeeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018618          279 CLRGLRGDAGVVECAFVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK  353 (353)
Q Consensus       279 i~~~~~~~~~v~~~~~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~  353 (353)
                      |+++..+++.++++++++|+| .+++|+|+||++|++|+++++++++|+++|+++|++|++.|++.+++|++|++|
T Consensus       244 il~~~~~~~~v~~~~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~S~~~i~~~~~~~~~~~~~  319 (321)
T PTZ00325        244 VLKALRGDKGIVECAFVESDMRPECPFFSSPVELGKEGVERVLPIGPLNAYEEELLEAAVPDLKKNIEKGLEFARK  319 (321)
T ss_pred             HHhhcCCCCCeEEEEEEecCCCCCCeEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            998754445688888899999 689999999999999999999933999999999999999999999999999986

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=3.8e-63  Score=471.78  Aligned_cols=286  Identities=27%  Similarity=0.394  Sum_probs=259.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC---CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~---~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ||+|||| |+||+++|+.|+.+++++||+|+|+++  ++|+++||+|....   ..++...  +|+ ++++|||+||+|+
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~--~~y-~~~~~aDivvita   76 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA--GDY-DDCADADIIVITA   76 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE--CCH-HHhCCCCEEEECC
Confidence            7999999 999999999999999999999999987  79999999997532   2455542  464 8899999999999


Q ss_pred             CCCCCCCCC--HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          118 GVPRKPGMT--RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       118 g~~~~~g~~--r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      |.|++|||+  |.|++..|+++++++++.+.+++|++++|++|||+|++|+++    ++.+|||++|+||+ |.||++||
T Consensus        77 G~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~----~k~sg~p~~rviG~gt~LDs~R~  152 (307)
T cd05290          77 GPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIA----ATEFDYPANKVIGTGTMLDTARL  152 (307)
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHH----HHHhCcChhheecccchHHHHHH
Confidence            999999999  699999999999999999999999999999999999998765    68889999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-C---------CChHHHHHHHHHHhcchhhhhhhhccCCcc
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S---------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA  264 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-~---------~~~~~~~el~~~v~~~~~~i~~~~~gkg~~  264 (353)
                      ++++|+++|+++++|+++|||+||+ +++|+||++++++ +         ..+..+++|.+++++++++|++   +||+|
T Consensus       153 ~~~la~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~v~g~~l~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~KG~t  228 (307)
T cd05290         153 RRIVADKYGVDPKNVTGYVLGEHGS-HAFPVWSLVNIAGLPLDELEALFGKEPIDKDELLEEVVQAAYDVFN---RKGWT  228 (307)
T ss_pred             HHHHHHHhCCCcccEEEEEEecCCC-ceEEeeeeeEECCEEHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHH---ccCee
Confidence            9999999999999999999999999 9999999998753 1         1222478999999999999999   67899


Q ss_pred             cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018618          265 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG  342 (353)
Q Consensus       265 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~  342 (353)
                      +|++|.++++++++|+.|.+   .++|++ +++|+| ++++|||+||++|++|+++++++ +||++|+++|++|++.|++
T Consensus       229 ~~~ia~a~~~ii~ail~d~~---~v~~vsv~~~G~yg~~~v~~svP~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~i~~  304 (307)
T cd05290         229 NAGIAKSASRLIKAILLDER---SILPVCTLLSGEYGLSDVALSLPTVIGAKGIERVLEI-PLDEWELEKLHKSAKAIRE  304 (307)
T ss_pred             hHHHHHHHHHHHHHHHhCCC---eEEEEEEeeCCccCCCCEEEEEEEEEeCCCceEecCC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999998864   588886 789999 78999999999999999999996 9999999999999999997


Q ss_pred             HH
Q 018618          343 SI  344 (353)
Q Consensus       343 ~~  344 (353)
                      .+
T Consensus       305 ~~  306 (307)
T cd05290         305 TI  306 (307)
T ss_pred             Hh
Confidence            65

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05086 malate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-61  Score=463.42  Aligned_cols=310  Identities=56%  Similarity=0.880  Sum_probs=278.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||+||||+|.||+++++.|.. .+...+++|+|+++ ..++++|+.|......+... ..+|++++++|+|+||+++|.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~~-~~~d~~~~l~~~DiVIitaG~   79 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGF-SGEDPTPALEGADVVLISAGV   79 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEEe-CCCCHHHHcCCCCEEEEcCCC
Confidence            6999999999999999998865 56778999999877 67788999986322334432 235767899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHH
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVA  199 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA  199 (353)
                      ++++|++|.+++..|+++++++++.|++++|+++++++|||+|++|+++++.+++.+++|++||||+|.||++|+++++|
T Consensus        80 ~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvsNP~D~~t~~~~~~~~~~sg~p~~rvig~~~Lds~R~~~~ia  159 (312)
T PRK05086         80 ARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDVIRSETFVA  159 (312)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchHHHHHHHHHHHHHhcCCCHHHEEeeecHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999988888899999999999998899999999999


Q ss_pred             HHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHH
Q 018618          200 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC  279 (353)
Q Consensus       200 ~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai  279 (353)
                      +++|+++++|+++||||||+++++|+||++ -+.+++++++++|.+++++++++|++.|.|+|+|+||+|.++++++++|
T Consensus       160 ~~l~~~~~~v~~~v~GeHg~~s~~p~~S~~-~g~~l~~~~~~~i~~~v~~~g~~ii~~k~~~g~t~~~~a~a~~~~v~ai  238 (312)
T PRK05086        160 ELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL  238 (312)
T ss_pred             HHhCCChhheEEEEEEecCCCceecccccc-CCccCCHHHHHHHHHHHHHHHHHHHhcccCCCCchhhHHHHHHHHHHHH
Confidence            999999999999999999776999999999 3335777779999999999999999976567999999999999999999


Q ss_pred             HhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018618          280 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK  353 (353)
Q Consensus       280 ~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~  353 (353)
                      ++++.+++.++|+++++|+-..++|||+||++|++|+++++++++|+++|+++|++|++.|++.+++|++|+++
T Consensus       239 ~~~~~~~~~v~~~~~~~~~g~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~~l~~s~~~i~~~~~~g~~~~~~  312 (312)
T PRK05086        239 VRALQGEQGVVECAYVEGDGKYARFFAQPVLLGKNGVEERLPIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK  312 (312)
T ss_pred             HhcCCCCCcEEEEEEEeccCCcceEEEEEEEEcCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            98866566699988777653458999999999999999999965999999999999999999999999999975

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=100.00  E-value=3.6e-62  Score=467.49  Aligned_cols=295  Identities=27%  Similarity=0.393  Sum_probs=262.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC-C-CeEEEEeCCCchhhhhC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALT  108 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~-~-~~v~~~~~t~d~~~al~  108 (353)
                      +|.||+||||+|+||+++++.|+..++++     ||+|+|+++    ++|+++||+|+.. . ..+.+.  ++| +++++
T Consensus         2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~   78 (323)
T TIGR01759         2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDP-EEAFK   78 (323)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cCh-HHHhC
Confidence            57899999988999999999999999998     999999954    6999999999873 1 223332  344 58899


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhC-CCCCCceEee
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  186 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kviG~  186 (353)
                      |||+||++||.|+++||+|.|++..|++++++++++|.+++| ++++|++|||+|++|+++    ++.+ |||++||||+
T Consensus        79 daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~  154 (323)
T TIGR01759        79 DVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIA----SKNAPDIPPKNFSAM  154 (323)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEe
Confidence            999999999999999999999999999999999999999998 999999999999998775    6778 9999999999


Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCCC----C-CChHH--HHHHHHHHhcchhhhhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----S-FTQEE--TEYLTNRIQNGGTEVVEAK  258 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~~----~-~~~~~--~~el~~~v~~~~~~i~~~~  258 (353)
                      |.||+.|+|+++|+++|++|++|+ .+||||||+ +++|+||++++.+    . ++++.  +++|.+++++++++|++  
T Consensus       155 t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~--  231 (323)
T TIGR01759       155 TRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN-TQVPDFTHATVDGRPVKEVIKDDKWLEGEFIPTVQQRGAAVIE--  231 (323)
T ss_pred             eHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC-ceeeccccCEECCccHHHHhcchhhHHHHHHHHHHhhHHHHHh--
Confidence            999999999999999999999995 669999999 9999999998753    1 33433  68999999999999999  


Q ss_pred             ccCCcccc-hHHHHHHHHHHHHHhccCCCCeEEEee-eeeC-CC--CCccEEEEEEEEcCCceEEEcc-CCCCCHHHHHH
Q 018618          259 AGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYERIG  332 (353)
Q Consensus       259 ~gkg~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~s~Pv~ig~~Gv~~v~~-~~~L~~~E~~~  332 (353)
                       +||+++| ++|.++++++++|++|++. +.++|++ +++| +|  |+++|||+||++|++|++++++ + +|+++|+++
T Consensus       232 -~kG~t~~~~~a~a~~~iv~ail~~~~~-~~v~~~s~~~~g~~Yg~~~~v~~s~P~~lg~~Gv~~iv~~l-~L~~~E~~~  308 (323)
T TIGR01759       232 -ARGASSAASAANAAIDHVRDWVTGTPE-GDWVSMGVYSDGNPYGIPEGIIFSFPVTCKGDGEWEIVEGL-PLDDFVRGK  308 (323)
T ss_pred             -ccCCcchHHHHHHHHHHHHHHHcCCCC-CcEEEEEEEeCCcccCCCCCeEEEEEEEEcCCeeEEEcCCC-CCCHHHHHH
Confidence             5688999 5779999999999999732 2489998 7899 88  4899999999999999999999 6 999999999


Q ss_pred             HHHHHHHHHHHHHHh
Q 018618          333 LEKAKKELAGSIQKG  347 (353)
Q Consensus       333 l~~s~~~l~~~~~~~  347 (353)
                      |+.|++.|+++++++
T Consensus       309 l~~sa~~lk~~~~~~  323 (323)
T TIGR01759       309 LDATEDELLEEKEEA  323 (323)
T ss_pred             HHHHHHHHHHHHhcC
Confidence            999999999998764

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=5.8e-62  Score=464.93  Aligned_cols=291  Identities=24%  Similarity=0.340  Sum_probs=261.7

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCC-eEEEEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~-~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +.+||+|||| |+||+++++.|+..++++||+|+|+++  ++|+++||+|+.... ..... .++|+ ++++|||+||++
T Consensus         2 ~~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~-~~~dy-~~~~~adivvit   78 (312)
T cd05293           2 PRNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIE-ADKDY-SVTANSKVVIVT   78 (312)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEE-ECCCH-HHhCCCCEEEEC
Confidence            3569999998 999999999999999999999999987  789999999987322 12222 34676 569999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  195 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~  195 (353)
                      +|.++++||+|.|++..|+++++++++.|++++|++++|++|||+|++|+++    ++.+|+|++|+||+ |.||+.|++
T Consensus        79 aG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~k~sg~p~~~viG~gt~Ld~~R~~  154 (312)
T cd05293          79 AGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYVA----WKLSGLPKHRVIGSGCNLDSARFR  154 (312)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHHH----HHHhCCCHHHEEecCchHHHHHHH
Confidence            9999999999999999999999999999999999999999999999998654    67789999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCCc
Q 018618          196 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  263 (353)
Q Consensus       196 ~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~  263 (353)
                      +++|+++++++++|+++|||+||+ +++|+||++++.+            ..+++++++|.+++++++++|++   +||+
T Consensus       155 ~~la~~l~v~~~~v~~~v~GeHG~-s~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg~  230 (312)
T cd05293         155 YLIAERLGVAPSSVHGWIIGEHGD-SSVPVWSGVNVAGVRLQDLNPDIGTDKDPEKWKEVHKQVVDSAYEVIK---LKGY  230 (312)
T ss_pred             HHHHHHhCCChhhEEEEEeecCCC-CccccceeceECCEEHHHHhhhccccccHHHHHHHHHHHHHHHHHHHH---hcCC
Confidence            999999999999999999999999 9999999998753            11234589999999999999998   5689


Q ss_pred             ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHH
Q 018618          264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL  340 (353)
Q Consensus       264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l  340 (353)
                      |+|++|.++++++++|+.+.+   .+++++ +++|.|  +++++||+||++|++|+++++++ +|+++|+++|++|++.|
T Consensus       231 t~~~~a~a~~~ii~ail~d~~---~~~~vsv~~~g~yg~~~d~~~svP~~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~i  306 (312)
T cd05293         231 TSWAIGLSVADLVDAILRNTG---RVHSVSTLVKGLHGIEDEVFLSLPCILGENGITHVIKQ-PLTEEEQEKLQKSADTL  306 (312)
T ss_pred             chHHHHHHHHHHHHHHHcCCC---eEEEEEEEeCCccCCCCCeEEEEeEEEeCCceEEEecC-CCCHHHHHHHHHHHHHH
Confidence            999999999999999998865   577776 789988  58999999999999999999996 99999999999999999


Q ss_pred             HHHHH
Q 018618          341 AGSIQ  345 (353)
Q Consensus       341 ~~~~~  345 (353)
                      ++.++
T Consensus       307 ~~~~~  311 (312)
T cd05293         307 WEVQK  311 (312)
T ss_pred             HHHhh
Confidence            98764

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1495 consensus Lactate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=5.6e-62  Score=438.93  Aligned_cols=291  Identities=23%  Similarity=0.368  Sum_probs=266.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC---CeEEEEeCCCchhhhhCCCcEEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~---~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      ..||+|+|+ |+||.+.|+.++.+++.+||+|+|.++  ++|++|||+|...+   +++..   ++|+ .+.+++++||+
T Consensus        20 ~~KItVVG~-G~VGmAca~siL~k~Ladel~lvDv~~dklkGE~MDLqH~s~f~~~~~V~~---~~Dy-~~sa~S~lvIi   94 (332)
T KOG1495|consen   20 HNKITVVGV-GQVGMACAISILLKGLADELVLVDVNEDKLKGEMMDLQHGSAFLSTPNVVA---SKDY-SVSANSKLVII   94 (332)
T ss_pred             CceEEEEcc-chHHHHHHHHHHHhhhhhceEEEecCcchhhhhhhhhccccccccCCceEe---cCcc-cccCCCcEEEE
Confidence            569999999 999999999999999999999999988  89999999998642   34443   4686 77899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      |||..+++|++|++++++|+.+++.+.+++.+|.|+++++++|||+|+|||+.    |+.+|||++|+||. |+||+.||
T Consensus        95 TAGarq~~gesRL~lvQrNV~ifK~iip~lv~ySpd~~llvvSNPVDilTYv~----wKLSgfP~nRViGsGcnLDsaRF  170 (332)
T KOG1495|consen   95 TAGARQSEGESRLDLVQRNVDIFKAIIPALVKYSPDCILLVVSNPVDILTYVT----WKLSGFPKNRVIGSGCNLDSARF  170 (332)
T ss_pred             ecCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCchHHHHHHH----HHHcCCcccceeccCcCccHHHH
Confidence            99999999999999999999999999999999999999999999999998764    89999999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCC
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  262 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg  262 (353)
                      |+.++++||++|+++++||+||||| +.||+||...+.+            ..+++.|+++.++|...+|+|++.   ||
T Consensus       171 ryLi~~~Lg~~pss~hgwIiGEHGd-SsV~vWSgvniAGv~l~~l~~~~~t~~d~e~w~eihK~v~~sayevikl---KG  246 (332)
T KOG1495|consen  171 RYLIGNRLGVHPSSCHGWIIGEHGD-SSVPVWSGVNIAGVSLKDLNPDLGTDYDPENWKEIHKQVVDSAYEVIKL---KG  246 (332)
T ss_pred             HHHHHHHhCCCcccceEEEeeccCC-ccceecccccccceEHhHhChhhcCCCCHHHHHHHHHHHHHHHHHHHHh---cC
Confidence            9999999999999999999999999 9999999997632            356678999999999999999995   59


Q ss_pred             cccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHH
Q 018618          263 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE  339 (353)
Q Consensus       263 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~  339 (353)
                      +|.|++|.++++++++|++|++   .+.|++ .++|.|  .+++|+|+||++|++|+..++.. +|+++|.++|.+|++.
T Consensus       247 yTswaIglsva~l~~ail~n~~---~i~~Vst~~kg~~gI~~dVflSlPc~l~~~Gi~~vv~~-~Lt~~E~akL~kSa~t  322 (332)
T KOG1495|consen  247 YTSWAIGLSVADLAQAILRNLR---RIHPVSTMVKGLYGIDDDVFLSLPCLLGANGITHVVKQ-KLTDEEVAKLKKSAKT  322 (332)
T ss_pred             chHHHHHHHHHHHHHHHHhCcC---ceeeeeeccccccCCCCceEEecceeecCCchhhhhcc-cCCHHHHHHHHHHHHH
Confidence            9999999999999999999987   488887 589998  66999999999999999999996 9999999999999999


Q ss_pred             HHHHHHHhhh
Q 018618          340 LAGSIQKGIS  349 (353)
Q Consensus       340 l~~~~~~~~~  349 (353)
                      |.+ +|..+.
T Consensus       323 l~~-~q~~l~  331 (332)
T KOG1495|consen  323 LLE-AQKSLG  331 (332)
T ss_pred             HHH-HHHhcC
Confidence            985 555553

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=1.7e-61  Score=437.67  Aligned_cols=337  Identities=69%  Similarity=1.069  Sum_probs=317.1

Q ss_pred             hhhHHHHHhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc
Q 018618            8 NQRIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH   87 (353)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~   87 (353)
                      ++++.|.++++-+        +...|+....++..||+|.||+|-+|+.+..+|+++++.+++.|||+....|.+.||+|
T Consensus         3 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~KVAvlGAaGGIGQPLSLLlK~np~Vs~LaLYDi~~~~GVaaDlSH   74 (345)
T KOG1494|consen    3 LKSLIRSSASLSS--------GPKRVFSSGSQRGLKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIANTPGVAADLSH   74 (345)
T ss_pred             hHHHHHhhhhhcc--------CCcccccccccCcceEEEEecCCccCccHHHHHhcCcccceeeeeecccCCcccccccc
Confidence            5778888888776        34455666667778999999999999999999999999999999999889999999999


Q ss_pred             CCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHH
Q 018618           88 MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPI  167 (353)
Q Consensus        88 ~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~  167 (353)
                      .++...+..+.+..++++|+++||+|||.||+||+|||+|+|++..|+.|+++++..+.++||++.+.++|||+|...++
T Consensus        75 I~T~s~V~g~~g~~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsNPVNstVPI  154 (345)
T KOG1494|consen   75 INTNSSVVGFTGADGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISNPVNSTVPI  154 (345)
T ss_pred             cCCCCceeccCChhHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecCcccccchH
Confidence            99888899887778999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCC-CCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHH
Q 018618          168 AAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR  246 (353)
Q Consensus       168 ~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~-~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~  246 (353)
                      +++++++.+.|+|+|++|+|.||..|++.++++.+|++| ++++++|+|+|.+.|++|++|+..+...++++++++|+.+
T Consensus       155 aaevlKk~G~ydpkklfGVTtLDvVRA~tFv~~~~~~~p~~~v~VPVIGGHaG~TIlPLlSQ~~p~~~~~~~~~~~Lt~R  234 (345)
T KOG1494|consen  155 AAEVLKKAGVYDPKKLFGVTTLDVVRANTFVAEVLNLDPAEDVDVPVIGGHAGITIIPLLSQCKPPFRFTDDEIEALTHR  234 (345)
T ss_pred             HHHHHHHcCCCCccceeceehhhhhhHHHHHHHHhCCCchhcCCcceecCcCCceEeeecccCCCcccCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999 5599999999999999999999998888999999999999


Q ss_pred             HhcchhhhhhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCC
Q 018618          247 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLN  326 (353)
Q Consensus       247 v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~  326 (353)
                      ++..|.|+.+.|.|+|++.+|+|+|.+++..+++++.+++..++.|+|+....-+-.||+.|+++|++|++++..+++||
T Consensus       235 iQ~gGtEVV~AKaGaGSATLSMAyAga~fa~s~lrgl~G~~~v~ecafV~s~~~~~~fFaspv~Lg~~Gv~~v~~l~~ls  314 (345)
T KOG1494|consen  235 IQNGGTEVVKAKAGAGSATLSMAYAGAKFADSLLRGLNGDEDVVECAFVASPVTELPFFATPVTLGKKGVEEVLGLGKLS  314 (345)
T ss_pred             HHhCCceEEEeccCCCchhhhHHHHHHHHHHHHHHHhCCCCCeEEEeEEeccccCccceeceEEecCCceeeecCCCccC
Confidence            99999999999999999999999999999999999998877788999988775467899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018618          327 EYERIGLEKAKKELAGSIQKGISFSK  352 (353)
Q Consensus       327 ~~E~~~l~~s~~~l~~~~~~~~~~~~  352 (353)
                      ++|++.|+.+..+|++.|++|++|++
T Consensus       315 d~E~~~l~~~~~eLk~sI~KGv~F~~  340 (345)
T KOG1494|consen  315 DYEEKALEAAKPELKKSIEKGVTFVK  340 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence            99999999999999999999999986

>PLN02602 lactate dehydrogenase

Probab=100.00  E-value=1.8e-61  Score=466.70  Aligned_cols=291  Identities=24%  Similarity=0.370  Sum_probs=262.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +||+|||+ |+||+++++.|+..++++||+|+|+++  ++|+++||+|+... ...+.. .++|+ ++++|||+||+++|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~-~~~dy-~~~~daDiVVitAG  114 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKIL-ASTDY-AVTAGSDLCIVTAG  114 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEE-eCCCH-HHhCCCCEEEECCC
Confidence            59999998 999999999999999999999999988  79999999998632 223332 23565 66999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  197 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~  197 (353)
                      .|+++|++|.|++..|+++++++++.|+++||++|+|++|||+|++|+++    ++.+|||++||||+ |.||++|++++
T Consensus       115 ~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~----~k~sg~p~~rviG~gt~LDs~R~r~~  190 (350)
T PLN02602        115 ARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVA----WKLSGFPANRVIGSGTNLDSSRFRFL  190 (350)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHHhCCCHHHEEeecchHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998765    67789999999999 79999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618          198 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  265 (353)
Q Consensus       198 lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~  265 (353)
                      +|+++|+++++|+++||||||+ +++|+||.+++.+            .+++++++++.+++++++++|++   +||+|+
T Consensus       191 lA~~l~v~~~~V~~~ViGeHGd-s~vp~wS~~~i~G~pl~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~---~KG~t~  266 (350)
T PLN02602        191 IADHLDVNAQDVQAYIVGEHGD-SSVALWSSVSVGGVPVLSFLEKQQIAYEKETLEEIHRAVVDSAYEVIK---LKGYTS  266 (350)
T ss_pred             HHHHhCCCccceeeeEEecCCC-ceEeeeeeeeECCEEHHHHhhccCCccCHHHHHHHHHHHHHHHHHHHh---cCCccH
Confidence            9999999999999999999998 9999999998632            13334578999999999999999   678999


Q ss_pred             chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-C--CccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618          266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-T--ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  341 (353)
Q Consensus       266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~--~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~  341 (353)
                      |++|.++++++++|++|.+   .++|++ +++|+| .  +++|+|+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus       267 ~gia~a~a~ii~ail~d~~---~v~~vsv~~~g~Yg~~~~~v~~s~P~~ig~~Gi~~i~~l-~L~~~E~~~l~~sa~~l~  342 (350)
T PLN02602        267 WAIGYSVASLVRSLLRDQR---RIHPVSVLAKGFHGIDEGDVFLSLPAQLGRNGVLGVVNV-HLTDEEAERLRKSAKTLW  342 (350)
T ss_pred             HHHHHHHHHHHHHHHhcCC---CeEEEEEecccccCCCCCCcEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            9999999999999999875   588887 689998 3  7899999999999999999996 999999999999999999


Q ss_pred             HHHHHh
Q 018618          342 GSIQKG  347 (353)
Q Consensus       342 ~~~~~~  347 (353)
                      +.++..
T Consensus       343 ~~~~~~  348 (350)
T PLN02602        343 EVQSQL  348 (350)
T ss_pred             HHHHHh
Confidence            877654

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=100.00  E-value=6.4e-61  Score=455.45  Aligned_cols=281  Identities=25%  Similarity=0.425  Sum_probs=254.4

Q ss_pred             EEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           46 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        46 IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||+ |+||+++++.|+..++++||+|+|+++  ++|+++||+|+...  ..++..  .+| +++++|||+||+++|.|+
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~daDivVitag~~r   76 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR--SGD-YSDCKDADLVVITAGAPQ   76 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe--cCC-HHHHCCCCEEEECCCCCC
Confidence            6898 999999999999999999999999987  79999999998642  234443  356 488999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHHHH
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE  200 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~lA~  200 (353)
                      ++||+|.|++..|+++++++++.|++++|++++|++|||+|++|+++    ++.+++|++||||+ |.||+.|+++++|+
T Consensus        77 k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~----~~~sg~p~~~viG~gt~LDs~R~~~~la~  152 (299)
T TIGR01771        77 KPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVA----WKLSGFPKNRVIGSGTVLDTARLRYLLAE  152 (299)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH----HHHhCCCHHHEEeccchHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999998764    67789999999999 89999999999999


Q ss_pred             HhCCCCCCCcceEEeecCCCccccccccCCCCC----CC-------ChHHHHHHHHHHhcchhhhhhhhccCCcccchHH
Q 018618          201 VLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----SF-------TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  269 (353)
Q Consensus       201 ~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~~-------~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A  269 (353)
                      ++|+++++|+++|||+||+ +++|+||++++.+    .+       .+.++++|.+++++++++|++   +||+++|++|
T Consensus       153 ~l~v~~~~V~~~v~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kG~t~~~~a  228 (299)
T TIGR01771       153 KLGVDPQSVHAYIIGEHGD-SEVPVWSSATIGGVPLLDYLKAKGTETDLDLEEIEKEVRDAAYEIIN---RKGATYYGIG  228 (299)
T ss_pred             HhCcCcCeEEEEEEecCCC-ceeeceeeeEECCEEHHHHhhhcccccHHHHHHHHHHHHHHHHHHhh---cCCeeeHHHH
Confidence            9999999999999999999 9999999998743    12       133477999999999999999   6789999999


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018618          270 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG  342 (353)
Q Consensus       270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~  342 (353)
                      .++++++++|++|++   .++||+ +++|+| .+++|||+||+||++|+++++++ +|+++|+++|++|++.|++
T Consensus       229 ~a~~~~i~ail~d~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~~s~~~ik~  299 (299)
T TIGR01771       229 MAVARIVEAILHDEN---RVLPVSAYLDGEYGIKDVYIGVPAVLGRNGVEEIIEL-PLSDEEKEAFQKSAETLKK  299 (299)
T ss_pred             HHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCEEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHhC
Confidence            999999999999864   589997 789999 67899999999999999999995 9999999999999999973

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=100.00  E-value=2.6e-60  Score=454.60  Aligned_cols=290  Identities=24%  Similarity=0.396  Sum_probs=263.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ++||+|||| |.||+++++.|+..++++||+|+|+++  ++|+++||.|+... ..+...  ++++ ++++|||+||+++
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~--~~~~-~~~~~adivIita   81 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIY--AGDY-SDCKDADLVVITA   81 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEE--eCCH-HHhCCCCEEEEec
Confidence            459999999 999999999999999999999999987  78999999998632 334443  3454 7899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHH
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  196 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~  196 (353)
                      |.|+++||+|.|++..|+++++++++.+++++|++|+|++|||+|++|+++    ++.+|+|++||||+ |.||+.|+++
T Consensus        82 g~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsNP~d~~~~~~----~k~sg~p~~~viG~gt~LDs~R~~~  157 (315)
T PRK00066         82 GAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASNPVDILTYAT----WKLSGFPKERVIGSGTSLDSARFRY  157 (315)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCcHHHHHHHH----HHHhCCCHHHEeecCchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998764    56789999999999 8999999999


Q ss_pred             HHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----------CCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618          197 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  265 (353)
Q Consensus       197 ~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~  265 (353)
                      .+|+++|+++++|+++|||+||+ +++|+||++++++           .+++++++++.+++++++++|++   +||++.
T Consensus       158 ~la~~l~v~~~~V~~~viGeHG~-s~v~~~S~~~v~g~~l~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~---~kg~t~  233 (315)
T PRK00066        158 MLSEKLDVDPRSVHAYIIGEHGD-TEFPVWSHANVAGVPLEEYLEENEQYDEEDLDEIFENVRDAAYEIIE---KKGATY  233 (315)
T ss_pred             HHHHHhCCCcccEEEEEEecCCC-cceecceeceECCEEHHHHhhhccCcCHHHHHHHHHHHHHHHHHHHh---cCCeeh
Confidence            99999999999999999999999 9999999998743           24446688999999999999999   568999


Q ss_pred             chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 018618          266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  343 (353)
Q Consensus       266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~  343 (353)
                      |++|.++++++++|+++.+   .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++.
T Consensus       234 ~~~a~~~~~i~~ail~~~~---~v~~~sv~~~g~yg~~~v~~S~Pv~ig~~Gv~~i~~l-~L~~~E~~~L~~s~~~l~~~  309 (315)
T PRK00066        234 YGIAMALARITKAILNNEN---AVLPVSAYLEGQYGEEDVYIGVPAVVNRNGIREIVEL-PLNDDEKQKFAHSADVLKEI  309 (315)
T ss_pred             HHHHHHHHHHHHHHHcCCC---eEEEEEEEeccccCCCCEEEEeEEEEeCCcEEEEcCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999754   588887 789999 78999999999999999999996 99999999999999999998


Q ss_pred             HHH
Q 018618          344 IQK  346 (353)
Q Consensus       344 ~~~  346 (353)
                      ++.
T Consensus       310 ~~~  312 (315)
T PRK00066        310 MDE  312 (315)
T ss_pred             HHH
Confidence            875

>PRK05442 malate dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-60  Score=456.13  Aligned_cols=297  Identities=22%  Similarity=0.299  Sum_probs=262.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC-C-CeEEEEeCCCchhhhhC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALT  108 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~-~-~~v~~~~~t~d~~~al~  108 (353)
                      .|+||+||||+|+||+++++.|...++++     ||+|+|+++    ++|+++||+|+.. . ..+++.  +++ +++++
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~-y~~~~   79 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDP-NVAFK   79 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cCh-HHHhC
Confidence            57899999988999999999999999888     999999954    6899999999862 1 234432  345 58899


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC-CCCCCceEee
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  186 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kviG~  186 (353)
                      |||+||+++|.|+++|++|.|++..|+++++++++.|.+|+ |++++|++|||+|++|+++    ++.+ +||++||||+
T Consensus        80 daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~k~s~g~p~~rViG~  155 (326)
T PRK05442         80 DADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIA----MKNAPDLPAENFTAM  155 (326)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHH----HHHcCCCCHHHEEee
Confidence            99999999999999999999999999999999999999988 7999999999999999875    5667 9999999999


Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcce-EEeecCCCccccccccCCCCC-----CCChHH--HHHHHHHHhcchhhhhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVEAK  258 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~-viG~hg~~~~vp~~s~~~v~~-----~~~~~~--~~el~~~v~~~~~~i~~~~  258 (353)
                      |.||++||++++|++++++|++|+++ ||||||+ +++|+||++++.+     .+++.+  +++|.+++++++++|++  
T Consensus       156 t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~--  232 (326)
T PRK05442        156 TRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA-TQYPDFRHATIDGKPAAEVINDQAWLEDTFIPTVQKRGAAIIE--  232 (326)
T ss_pred             eHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC-ceeeccccCEECCEEHHHHccchhhHHHHHHHHHHhhHHHHHh--
Confidence            99999999999999999999999986 5999999 9999999999854     134433  57999999999999999  


Q ss_pred             ccCCcccchHHHH-HHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618          259 AGAGSATLSMAYA-AVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  334 (353)
Q Consensus       259 ~gkg~~~~s~A~a-~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~  334 (353)
                       +||+++|++|.+ +++++++|+++.+. ..++|++ +++|+|  |+++|||+||++| +|+++++...+|+++|+++|+
T Consensus       233 -~kG~t~~~~a~~~~~~iv~ail~~~~~-~~i~~~sv~~~g~ygi~~~v~~s~P~~ig-~Gv~~iv~~l~L~~~E~~~l~  309 (326)
T PRK05442        233 -ARGASSAASAANAAIDHVRDWVLGTPE-GDWVSMGVPSDGSYGIPEGLIFGFPVTCE-NGEYEIVQGLEIDDFSREKID  309 (326)
T ss_pred             -CcCCccHHHHHHHHHHHHHHHHhCCCC-CeEEEEEEEecCccCCcCCeEEEEEEEEc-CcEEEEeCCCCCCHHHHHHHH
Confidence             568999999999 59999999998521 2588987 689999  5899999999999 999999663499999999999


Q ss_pred             HHHHHHHHHHHHhhh
Q 018618          335 KAKKELAGSIQKGIS  349 (353)
Q Consensus       335 ~s~~~l~~~~~~~~~  349 (353)
                      +|++.|+++.+.+..
T Consensus       310 ~s~~~l~~~~~~~~~  324 (326)
T PRK05442        310 ATLAELEEERDAVKH  324 (326)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999887754

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=100.00  E-value=1.2e-59  Score=463.10  Aligned_cols=301  Identities=22%  Similarity=0.253  Sum_probs=265.2

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhC-------CCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhh
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKIN-------PLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENA  106 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~-------~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~a  106 (353)
                      -.++.||+||||+|+||+++++.|+.+       ++..||+|+|+++  ++|+++||+|+.+  ...+.+.  +.| +++
T Consensus        97 ~~~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~--~~~-ye~  173 (444)
T PLN00112         97 WKKLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG--IDP-YEV  173 (444)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe--cCC-HHH
Confidence            355789999999999999999999998       7777999999988  8999999999873  1234332  345 588


Q ss_pred             hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      ++|||+||+++|.|+++||+|.|++..|+++++++++.|.+ ++|++++|++|||+|++|+++    ++.++++++|+||
T Consensus       174 ~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~----~k~sg~~~~rViG  249 (444)
T PLN00112        174 FQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALIC----LKNAPNIPAKNFH  249 (444)
T ss_pred             hCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHH----HHHcCCCCcceEE
Confidence            99999999999999999999999999999999999999999 589999999999999998765    6778999999999


Q ss_pred             e-chhhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCC-----CCChHH--HHHHHHHHhcchhhhhh
Q 018618          186 V-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVE  256 (353)
Q Consensus       186 ~-t~ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~--~~el~~~v~~~~~~i~~  256 (353)
                      + |.||++||++.||+++|+++++| +++||||||+ ++||+||++++++     .+++.+  +++|.+++++++++|++
T Consensus       250 tgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd-sqvp~wS~a~V~G~pl~e~i~~~~~~~~ei~~~v~~~g~~Ii~  328 (444)
T PLN00112        250 ALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKINGLPVKEVITDHKWLEEEFTPKVQKRGGVLIK  328 (444)
T ss_pred             eeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC-ceeeccceeEECCccHHHhhccccchHHHHHHHHHHHHHHHHh
Confidence            9 99999999999999999999999 6699999999 9999999999853     133333  58999999999999998


Q ss_pred             hhccCCcccc-hHHHHHHHHHHHHHhccCCCCeEEEee-eeeC-CC--CCccEEEEEEEEcCCceEEEc-cCCCCCHHHH
Q 018618          257 AKAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIF-QLGPLNEYER  330 (353)
Q Consensus       257 ~~~gkg~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~s~Pv~ig~~Gv~~v~-~~~~L~~~E~  330 (353)
                         +||++.| ++|.++++++++|+.+.+ ++.++|++ +++| +|  ++|++||+||++|++|+++++ ++ +|+++|+
T Consensus       329 ---~kG~t~~~s~a~ai~~~I~ail~~~d-~~~vlpvsv~l~G~~YGi~~dv~~SvPvvig~~Gv~~Iv~el-~L~~~E~  403 (444)
T PLN00112        329 ---KWGRSSAASTAVSIADAIKSLVTPTP-EGDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYEIVKDV-EIDDYLR  403 (444)
T ss_pred             ---ccCchhHHHHHHHHHHHHHHHHcCCC-CCeEEEEEEEeCCcccCCCCCeEEEeEEEEeCCeeEEECCCC-CCCHHHH
Confidence               5677777 999999999999995443 23699998 7899 48  489999999999999999999 65 9999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhh
Q 018618          331 IGLEKAKKELAGSIQKGISFS  351 (353)
Q Consensus       331 ~~l~~s~~~l~~~~~~~~~~~  351 (353)
                      ++|++|+++|+++.+.+...+
T Consensus       404 ~~l~~Sa~~L~~e~~~~~~~~  424 (444)
T PLN00112        404 ERIKKSEAELLAEKRCVAHLT  424 (444)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998876543

>cd00704 MDH Malate dehydrogenase

Probab=100.00  E-value=9.5e-60  Score=451.40  Aligned_cols=294  Identities=28%  Similarity=0.388  Sum_probs=260.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~A  110 (353)
                      .||+||||+|+||+++++.|+..++++     +|+|+|+++    +++.++||.|+..  .......  + +.+++++||
T Consensus         1 ~KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~--~-~~~~~~~~a   77 (323)
T cd00704           1 LHVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT--T-DPEEAFKDV   77 (323)
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe--c-ChHHHhCCC
Confidence            389999999999999999999999887     599999975    6889999999852  1223332  2 346899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCC-CCCCceEeech
Q 018618          111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT-YDPKKLLGVTM  188 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~-~~~~kviG~t~  188 (353)
                      |+||++||.|+++|++|.|++..|+++++++++.|++++ |++++|++|||+|++|+++    ++.+| +|++||||+|.
T Consensus        78 DiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~vig~t~  153 (323)
T cd00704          78 DVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA----LKNAPNLPPKNFTALTR  153 (323)
T ss_pred             CEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHEEEeeH
Confidence            999999999999999999999999999999999999996 9999999999999998764    67788 59999999999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCCC----C----ChHH--HHHHHHHHhcchhhhhhh
Q 018618          189 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCS----F----TQEE--TEYLTNRIQNGGTEVVEA  257 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~~----~----~~~~--~~el~~~v~~~~~~i~~~  257 (353)
                      ||++|||+++|++++++|++| .++||||||+ +++|+||++++.+.    +    .+++  .++|.+++++++++|++ 
T Consensus       154 LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~g~~~~~~~~~~~~~~~~~~~i~~~v~~~~~~Ii~-  231 (323)
T cd00704         154 LDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN-TQVPDLSNAVVYGPGGTEWVLDLLDEEWLNDEFVKTVQKRGAAIIK-  231 (323)
T ss_pred             HHHHHHHHHHHHHhCcCHHHceeeeEEecccC-ceeeccccceecCccHHHhcccccChHHHHHHHHHHHHhhHHHHHh-
Confidence            999999999999999999999 5689999999 99999999987431    1    2234  57899999999999999 


Q ss_pred             hccCCcccch-HHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHH
Q 018618          258 KAGAGSATLS-MAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIG  332 (353)
Q Consensus       258 ~~gkg~~~~s-~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~  332 (353)
                        +||++.|+ +|.++++++++|++|++++ .++||+ +++|+|   |+++|||+||+||++|+++++++ +|+++|+++
T Consensus       232 --~kg~t~~~~~a~a~~~iv~ail~~~~~~-~v~~~s~~~~g~y~gi~~~v~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~  307 (323)
T cd00704         232 --KRGASSAASAAKAIADHVKDWLFGTPPG-EIVSMGVYSPGNPYGIPPGIVFSFPCTCKGGGWHVVEDL-KLNDWLREK  307 (323)
T ss_pred             --ccCcchhHHHHHHHHHHHHHHHhCCCCC-cEEEEEEEeCCccCCCCCceEEEEEEEEcCCEEEEecCC-CCCHHHHHH
Confidence              56889896 6999999999999998644 489997 789988   47999999999999999999996 999999999


Q ss_pred             HHHHHHHHHHHHHHhh
Q 018618          333 LEKAKKELAGSIQKGI  348 (353)
Q Consensus       333 l~~s~~~l~~~~~~~~  348 (353)
                      |++|++.|+++.+.+|
T Consensus       308 l~~s~~~l~~~~~~~~  323 (323)
T cd00704         308 LKATEEELIEEKEIAL  323 (323)
T ss_pred             HHHHHHHHHHHHHhhC
Confidence            9999999999988764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=100.00  E-value=2.3e-59  Score=454.87  Aligned_cols=299  Identities=22%  Similarity=0.260  Sum_probs=262.2

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEE--eCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhh
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLY--DVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENAL  107 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~--D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al  107 (353)
                      .+|.||+||||+|+||+++|+.|+..++++     +|+|+  |+++  ++|+++||.|+.+  ...+...  ++| ++++
T Consensus        42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~--~~~-y~~~  118 (387)
T TIGR01757        42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG--IDP-YEVF  118 (387)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe--cCC-HHHh
Confidence            457899999999999999999999999987     67777  6555  7999999999863  1234332  345 5889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      +|||+||+++|.|+++|++|.|++..|+++++++++.|.+++ |++++|++|||+|++|+++    ++.+++|++|+||+
T Consensus       119 kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~----~k~sg~~~~rviG~  194 (387)
T TIGR01757       119 EDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIA----MKNAPNIPRKNFHA  194 (387)
T ss_pred             CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHH----HHHcCCCcccEEEe
Confidence            999999999999999999999999999999999999999988 9999999999999998765    67789999999999


Q ss_pred             -chhhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCC-----CCChHH--HHHHHHHHhcchhhhhhh
Q 018618          187 -TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVEA  257 (353)
Q Consensus       187 -t~ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~--~~el~~~v~~~~~~i~~~  257 (353)
                       |.||++|+|++||+++++++++| +++||||||+ +++|+||++++.+     .+++.+  +++|.+++++++++|++ 
T Consensus       195 gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd-s~vp~~S~a~V~G~pl~~~~~~~~~~~~ei~~~v~~~g~eIi~-  272 (387)
T TIGR01757       195 LTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST-TQVPDFVNAKIGGRPAKEVIKDTKWLEEEFTPTVQKRGGALIK-  272 (387)
T ss_pred             cchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC-cEEecceeeEECCEEhHHhcccccchHHHHHHHHHHHHHHHHh-
Confidence             99999999999999999999999 5999999999 9999999998743     123323  68999999999999998 


Q ss_pred             hccCCcccc-hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCC-C--CCccEEEEEEEEcCCceEEEc-cCCCCCHHHHH
Q 018618          258 KAGAGSATL-SMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIF-QLGPLNEYERI  331 (353)
Q Consensus       258 ~~gkg~~~~-s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~s~Pv~ig~~Gv~~v~-~~~~L~~~E~~  331 (353)
                        +||++.| ++|.++++++++|+.+.+. +.++|++ +++|+ |  +++++||+||++|++|+++++ ++ +|+++|++
T Consensus       273 --~KG~t~~~s~a~ai~~~i~ai~~g~d~-~~il~vsv~~~Ge~YGi~~gv~~S~Pvvig~~Gv~~Iv~~l-~L~~~E~~  348 (387)
T TIGR01757       273 --KWGRSSAASTAVSIADAIKSLVVPTPE-GDWFSTGVYTDGNPYGIAEGLVFSMPCRSKGDGDYELATDV-SMDDFLRE  348 (387)
T ss_pred             --ccCchhHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEeCCcccCCCCCEEEEEEEEEeCCEEEEECCCC-CCCHHHHH
Confidence              5676776 9999999999999955442 3588997 68996 8  489999999999999999997 75 99999999


Q ss_pred             HHHHHHHHHHHHHHHhhhh
Q 018618          332 GLEKAKKELAGSIQKGISF  350 (353)
Q Consensus       332 ~l~~s~~~l~~~~~~~~~~  350 (353)
                      +|++|++.|+++.+.+++.
T Consensus       349 ~l~~Sa~~L~~e~~~~~~~  367 (387)
T TIGR01757       349 RIRKSEDELLKEKECVAHL  367 (387)
T ss_pred             HHHHHHHHHHHHHHHHHHh
Confidence            9999999999999888764

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=100.00  E-value=4.5e-59  Score=445.35  Aligned_cols=288  Identities=25%  Similarity=0.399  Sum_probs=259.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +||+|||+ |.+|+++++.|+..|+..+|+|+|+++  ++++++||.|...  .......  ..++ +++++||+||+++
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~--~~~~-~~l~~aDIVIita   76 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK--AGDY-SDCKDADIVVITA   76 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE--cCCH-HHhCCCCEEEEcc
Confidence            38999998 999999999999999888999999987  6889999998753  1233333  2454 6799999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHH
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  196 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~  196 (353)
                      |.|+++||+|.|++.+|+++++++++.|++++|++++|++|||+|++|+++    ++.+++|++||||+ |.||++|+++
T Consensus        77 g~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~----~~~~g~p~~~v~g~gt~LDs~R~~~  152 (306)
T cd05291          77 GAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVV----QKLSGLPKNRVIGTGTSLDTARLRR  152 (306)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHH----HHHhCcCHHHEeeccchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999998764    67799999999999 8999999999


Q ss_pred             HHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCCcccc
Q 018618          197 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL  266 (353)
Q Consensus       197 ~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~  266 (353)
                      ++|+++|+++++|+++|||+||+ +++|+||++++.+          .+.+++++++.+++++++++|++   +||+++|
T Consensus       153 ~la~~l~v~~~~v~~~V~G~Hg~-s~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~---~kg~t~~  228 (306)
T cd05291         153 ALAEKLNVDPRSVHAYVLGEHGD-SQFVAWSTVTVGGKPLLDLLKEGKLSELDLDEIEEDVRKAGYEIIN---GKGATYY  228 (306)
T ss_pred             HHHHHHCCCcccceEEEEecCCC-ceeecceeeEEcCEEHHHHhhccccChHHHHHHHHHHHHHHHHHHH---ccCccHH
Confidence            99999999999999999999999 9999999998743          13345588999999999999999   5689999


Q ss_pred             hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          267 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       267 s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      ++|.++++++++|+++.+   .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|+++|++.+
T Consensus       229 ~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~l~~~~  304 (306)
T cd05291         229 GIATALARIVKAILNDEN---AILPVSAYLDGEYGEKDVYIGVPAIIGRNGVEEVIEL-DLTEEEQEKFEKSADIIKENI  304 (306)
T ss_pred             HHHHHHHHHHHHHHcCCC---EEEEEEEEeccccCCCCEEEEEEEEEeCCCEEEEECC-CCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999854   588887 789999 77999999999999999999995 999999999999999999876


Q ss_pred             H
Q 018618          345 Q  345 (353)
Q Consensus       345 ~  345 (353)
                      +
T Consensus       305 ~  305 (306)
T cd05291         305 K  305 (306)
T ss_pred             h
Confidence            5

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PTZ00117 malate dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-58  Score=442.96  Aligned_cols=297  Identities=31%  Similarity=0.500  Sum_probs=265.5

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEE
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      .+.+||+|||| |+||+++++.++..++ .+|+|+|+++  +.+.++|+.|....  ...+.. .++|++ +++|||+||
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~-~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~-~~~d~~-~l~~ADiVV   78 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNL-GDVVLYDVIKGVPQGKALDLKHFSTLVGSNINIL-GTNNYE-DIKDSDVVV   78 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCC-CeEEEEECCCccchhHHHHHhhhccccCCCeEEE-eCCCHH-HhCCCCEEE
Confidence            35569999998 9999999999999887 5899999988  67899999997532  123332 346875 899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHH
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  193 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R  193 (353)
                      +++|.++++|++|.|++..|.++++++++.|+++||++|+|++|||+|++|+++    ++.+++|++|++|+ |.||++|
T Consensus        79 itag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsNP~di~t~~~----~~~s~~p~~rviG~gt~lds~R  154 (319)
T PTZ00117         79 ITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTNPLDCMVKVF----QEKSGIPSNKICGMAGVLDSSR  154 (319)
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHHH----HHhhCCCcccEEEecchHHHHH
Confidence            999999999999999999999999999999999999999999999999998654    67789999999999 5999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCCc
Q 018618          194 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  263 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~  263 (353)
                      +++.+|+++|+++++|+++|+|+||+ +++|+||++++++          .+++++++++.+++++++++|++.+ |||+
T Consensus       155 ~~~~la~~l~v~~~~v~~~viGeHg~-~~v~~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~~ii~~~-~kg~  232 (319)
T PTZ00117        155 FRCNLAEKLGVSPGDVSAVVIGGHGD-LMVPLPRYCTVNGIPLSDFVKKGAITEKEINEIIKKTRNMGGEIVKLL-KKGS  232 (319)
T ss_pred             HHHHHHHHhCCCcccceEEEeecCCC-cEEeceeeceECCEEHHHHhhccccCHHHHHHHHHHHHHHHHHHHhhc-CCCC
Confidence            99999999999999999999999999 9999999998742          2455668899999999999999976 7899


Q ss_pred             ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618          264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  341 (353)
Q Consensus       264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~  341 (353)
                      +.||+|.++++++++|++|.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++||++|++|+..|+
T Consensus       233 t~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~l~  308 (319)
T PTZ00117        233 AFFAPAAAIVAMIEAYLKDEK---RVLVCSVYLNGQYNCKNLFVGVPVVIGGKGIEKVIEL-ELNAEEKELFDKSIESIQ  308 (319)
T ss_pred             hHHHHHHHHHHHHHHHhcCCC---eEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999864   589998 789999 46999999999999999999996 999999999999999999


Q ss_pred             HHHHHhhh
Q 018618          342 GSIQKGIS  349 (353)
Q Consensus       342 ~~~~~~~~  349 (353)
                      +.++....
T Consensus       309 ~~~~~~~~  316 (319)
T PTZ00117        309 ELTQKAKA  316 (319)
T ss_pred             HHHHHHHH
Confidence            98886543

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=100.00  E-value=7e-59  Score=442.58  Aligned_cols=286  Identities=29%  Similarity=0.421  Sum_probs=258.3

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      |+|||+ |.||+++++.|+..++++||+|+|+++  +.++++||.|.... ...+... ++|+ ++++|||+||+++|.|
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~-~~~~-~~l~~aDiVIitag~p   77 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVR-GGDY-ADAADADIVVITAGAP   77 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEE-CCCH-HHhCCCCEEEEcCCCC
Confidence            689999 999999999999999999999999987  78999999998643 2233332 3564 7899999999999999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHHH
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVA  199 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~lA  199 (353)
                      +++||+|.+++.+|+++++++++.|+++||++|+|++|||+|++|+++    ++++|+|++||+|+ |.||+.|+++.+|
T Consensus        78 ~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sNP~d~~~~~~----~~~sg~~~~kviG~gt~lDs~r~~~~la  153 (300)
T cd00300          78 RKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSNPVDILTYVA----QKLSGLPKNRVIGSGTLLDSARFRSLLA  153 (300)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccChHHHHHHHH----HHHhCcCHHHEEecCCcHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999998754    67789999999999 8999999999999


Q ss_pred             HHhCCCCCCCcceEEeecCCCccccccccCCCCC-C----C--ChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHH
Q 018618          200 EVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----F--TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA  272 (353)
Q Consensus       200 ~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-~----~--~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~  272 (353)
                      +++|+++++|+++|+|+||+ +++|+||++++.+ +    +  +++.+++|.+++++++++|++   +||+++|++|.++
T Consensus       154 ~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~v~g~p~~~~~~~~~~~~~~l~~~v~~~~~~ii~---~kg~t~~~~a~a~  229 (300)
T cd00300         154 EKLDVDPQSVHAYVLGEHGD-SQVVAWSTATVGGLPLEELAPFTKLDLEAIEEEVRTSGYEIIR---LKGATNYGIATAI  229 (300)
T ss_pred             HHhCCCcccEEEEEEeccCC-ceeeeeeeeEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHH---ccCcchHHHHHHH
Confidence            99999999999999999999 9999999998753 1    1  234578999999999999998   5689999999999


Q ss_pred             HHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          273 VKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       273 ~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      ++++++|+++.+   .++|++ +++|+| ++++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       230 ~~~~~ai~~~~~---~v~~~s~~~~g~yg~~~~~~s~Pv~ig~~Gi~~i~~l-~L~~~E~~~l~~s~~~l~~~~  299 (300)
T cd00300         230 ADIVKSILLDER---RVLPVSAVQEGQYGIEDVALSVPAVVGREGVVRILEI-PLTEDEEAKLQKSAEALKEVL  299 (300)
T ss_pred             HHHHHHHHcCCC---eEEEEEEEecCccCCCCEEEEEEEEEeCCCeEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence            999999999854   588997 689999 78999999999999999999995 999999999999999999765

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=100.00  E-value=8.8e-59  Score=444.54  Aligned_cols=295  Identities=22%  Similarity=0.305  Sum_probs=262.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT  108 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~  108 (353)
                      +|+||+||||+|+||+++++.|+..++++     ||+|+|+++    ++|+++||+|+..  ...+++.  +.| +++++
T Consensus         1 ~p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~-~~~~~   77 (322)
T cd01338           1 KPVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDP-NVAFK   77 (322)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCc-HHHhC
Confidence            46899999988999999999999999999     999999954    6899999999873  1234442  345 58899


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC-CCCCCceEee
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  186 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kviG~  186 (353)
                      |||+||+++|.|+++|++|.|++..|+++++++++.|.+++ |++++|++|||+|++|+++    ++.+ ++|++||+|+
T Consensus        78 daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~sg~~p~~~ViG~  153 (322)
T cd01338          78 DADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA----MKNAPDIPPDNFTAM  153 (322)
T ss_pred             CCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH----HHHcCCCChHheEEe
Confidence            99999999999999999999999999999999999999999 5999999999999999775    5677 5999999999


Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcc-eEEeecCCCccccccccCCCCC-----CCChHH--HHHHHHHHhcchhhhhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVEAK  258 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~-~viG~hg~~~~vp~~s~~~v~~-----~~~~~~--~~el~~~v~~~~~~i~~~~  258 (353)
                      |.||+.|+++.+|+++|+++++|++ +|||+||+ +++|+||++++.+     .+.+.+  +++|.+++++++++|++  
T Consensus       154 t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~-s~vp~~S~~~v~g~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~--  230 (322)
T cd01338         154 TRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP-TQYPDFTNATIGGKPAAEVINDRAWLEDEFIPTVQKRGAAIIK--  230 (322)
T ss_pred             hHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc-cEEEehhhcEECCEeHHHhcChHhhHHHHHHHHHHhhHHHHHh--
Confidence            9999999999999999999999997 56999998 9999999998743     244443  57999999999999999  


Q ss_pred             ccCCcccchHH-HHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618          259 AGAGSATLSMA-YAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  334 (353)
Q Consensus       259 ~gkg~~~~s~A-~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~  334 (353)
                       +||+++|+++ .++++++++|++|++. ..++|++ +++|+|  |+++|||+||++|++|+++++++ +|+++|+++|+
T Consensus       231 -~kG~t~~~~~a~a~~~iv~ail~~~~~-~~i~~~sv~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~l-~L~~~E~~~l~  307 (322)
T cd01338         231 -ARGASSAASAANAAIDHMRDWVLGTPE-GDWFSMAVPSDGSYGIPEGLIFSFPVRSKGGGYEIVEGL-EIDDFAREKID  307 (322)
T ss_pred             -CcCCccHHHHHHHHHHHHHHHhcCCCC-CeEEEEEEEccCccCCCCCeEEEEEEEEeCCEEEEEeCC-CCCHHHHHHHH
Confidence             5689999999 5999999999999852 2588887 689999  58999999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHHHh
Q 018618          335 KAKKELAGSIQKG  347 (353)
Q Consensus       335 ~s~~~l~~~~~~~  347 (353)
                      +|++.|+++.++.
T Consensus       308 ~s~~~l~~~~~~~  320 (322)
T cd01338         308 ATLAELLEEREAV  320 (322)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988765

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-58  Score=437.93  Aligned_cols=292  Identities=33%  Similarity=0.576  Sum_probs=261.7

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      +.+||+|||| |+||+++++.++..++. +|+|+|+++  +.+.++|+.|...  ....+.. .++|+ ++++|||+||+
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~-~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~-~~~d~-~~l~~aDiVI~   80 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLG-DVVLFDIVKNIPQGKALDISHSNVIAGSNSKVI-GTNNY-EDIAGSDVVIV   80 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCCchhhHHHHHHHhhhhccCCCeEEE-ECCCH-HHhCCCCEEEE
Confidence            3469999998 99999999999998874 699999988  6788999998742  1223332 34686 68999999999


Q ss_pred             cCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chh
Q 018618          116 PAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TML  189 (353)
Q Consensus       116 ~ag~~~~~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~l  189 (353)
                      ++|.++++|+     +|.+++..|+++++++++.|+++||++|+|++|||+|++++.+    ++.+++|++||+|+ |.|
T Consensus        81 tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sNP~di~t~~~----~~~sg~p~~rviGlgt~l  156 (321)
T PTZ00082         81 TAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITNPLDVMVKLL----QEHSGLPKNKVCGMAGVL  156 (321)
T ss_pred             CCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHhcCCChhhEEEecCcc
Confidence            9999999999     9999999999999999999999999999999999999998764    67889999999999 599


Q ss_pred             hHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhc
Q 018618          190 DVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKA  259 (353)
Q Consensus       190 d~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~  259 (353)
                      |+.|+++.+|+++|+++++|+++|+|+||+ +++|+||++++.+          .++++++++|.+++++++++|++.+ 
T Consensus       157 ds~R~~~~la~~l~v~~~~v~~~viGeHg~-s~v~~~S~~~i~g~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~i~~~~-  234 (321)
T PTZ00082        157 DSSRLRTYIAEKLGVNPRDVHASVIGAHGD-KMVPLPRYVTVGGIPLSEFIKKGLITQEEIDEIVERTRNTGKEIVDLL-  234 (321)
T ss_pred             cHHHHHHHHHHHhCCCcccceeeEEecCCC-ceEecceeeEECCEEHHHhhhcccCCHHHHHHHHHHHHHHHHHHHhhc-
Confidence            999999999999999999999999999999 9999999998743          1455668999999999999999976 


Q ss_pred             cCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 018618          260 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK  337 (353)
Q Consensus       260 gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~  337 (353)
                      |+|+|+||+|.++++++++|++|.+   .++|++ +++|+| .+++|+|+||+||++|+++++++ +||++|+++|++|+
T Consensus       235 gkg~t~~~ia~a~~~i~~ail~d~~---~v~~vs~~~~g~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~sa  310 (321)
T PTZ00082        235 GTGSAYFAPAAAAIEMAEAYLKDKK---RVLPCSAYLEGQYGHKDIYMGTPAVIGANGVEKIIEL-DLTPEEQKKFDESI  310 (321)
T ss_pred             CCCccHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecccCCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHH
Confidence            7899999999999999999999865   589997 789999 57999999999999999999996 99999999999999


Q ss_pred             HHHHHHHH
Q 018618          338 KELAGSIQ  345 (353)
Q Consensus       338 ~~l~~~~~  345 (353)
                      +.|++.++
T Consensus       311 ~~i~~~~~  318 (321)
T PTZ00082        311 KEVKRLEA  318 (321)
T ss_pred             HHHHHHHh
Confidence            99998764

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=4.9e-58  Score=437.27  Aligned_cols=288  Identities=31%  Similarity=0.514  Sum_probs=259.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC----CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      |||+|||+ |.||+.+|+.++..|+. +|+|+|+++  ..+.++|+.|...    ...++   .++|++ ++++||+||+
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~-~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~---~t~d~~-~~~~aDiVIi   75 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELA-DLVLLDVVEGIPQGKALDMYEASPVGGFDTKVT---GTNNYA-DTANSDIVVI   75 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCC-eEEEEeCCCChhHHHHHhhhhhhhccCCCcEEE---ecCCHH-HhCCCCEEEE
Confidence            69999999 99999999999999887 899999987  5677888877542    12333   246774 5899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      ++|.|+++|++|.|++..|++++++++++|.+++|++++|++|||+|++|+++    ++.+|+|++||||+ |.||+.|+
T Consensus        76 tag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tNP~di~t~~~----~~~sg~~~~rviG~g~~lds~R~  151 (305)
T TIGR01763        76 TAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSNPLDAMTYVA----WQKSGFPKERVIGQAGVLDSARF  151 (305)
T ss_pred             cCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHEEEeccchHHHHH
Confidence            99999999999999999999999999999999999999999999999998764    67889999999999 69999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccchHH
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  269 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A  269 (353)
                      ++.+|+++++++++|+++||||||+ +++|+||++++.+     .++++.+++|.+++++++++|++.+ |||++.|++|
T Consensus       152 ~~~la~~l~v~~~~v~~~v~GeHg~-s~~~~wS~~~i~g~~~~~~~~~~~~~~l~~~v~~~g~~ii~~~-~kg~t~~~~a  229 (305)
T TIGR01763       152 RTFIAMELGVSVQDVTACVLGGHGD-AMVPLVRYSTVAGIPVADLISAERIAEIVERTRKGGGEIVNLL-KQGSAYYAPA  229 (305)
T ss_pred             HHHHHHHhCcCHHHeeeeEEecCCC-cEEeeeeeeEECCEEHHHhcCHHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHH
Confidence            9999999999999999999999999 9999999998754     2344558999999999999999976 7899999999


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018618          270 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  345 (353)
Q Consensus       270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~  345 (353)
                      .++++++++|++|++   .++|++ +++|+| .+++|+|+||++|++|+++++++ +|+++|+++|++|++.|++.++
T Consensus       230 ~~~~~i~~ai~~~~~---~v~~~s~~~~~~yg~~~v~~s~P~~ig~~Gv~~i~~~-~l~~~E~~~l~~s~~~i~~~~~  303 (305)
T TIGR01763       230 ASVVEMVEAILKDRK---RVLPCAAYLDGQYGIDGIYVGVPVILGKNGVEHIYEL-KLDQSELALLNKSAKIVDENCK  303 (305)
T ss_pred             HHHHHHHHHHhCCCC---eEEEEEEEecccCCCCceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHh
Confidence            999999999999865   588887 789999 67999999999999999999996 9999999999999999998765

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=100.00  E-value=6.5e-57  Score=430.52  Aligned_cols=288  Identities=28%  Similarity=0.445  Sum_probs=260.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |||+|||+ |.||+++++.|+..|+..+++|+|+++  +.+.++|+.|.... ......  ++|+ +++++||+||++++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~--~~d~-~~l~~aDiViita~   76 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY--AGDY-ADCKGADVVVITAG   76 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe--eCCH-HHhCCCCEEEEccC
Confidence            69999999 999999999999999888999999987  67899999987531 223333  3565 77999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  197 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~  197 (353)
                      .++++|++|.+++..|+++++++++.+++++|+++++++|||+|++|+++    ++.+|||++||||+ |.||+.|++++
T Consensus        77 ~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~----~~~sg~p~~~viG~gt~LDs~R~~~~  152 (308)
T cd05292          77 ANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVA----YKLSGLPPNRVIGSGTVLDTARFRYL  152 (308)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHHCcCHHHeecccchhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999998765    57789999999999 89999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618          198 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  265 (353)
Q Consensus       198 lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~  265 (353)
                      +|+++++++++|+++|||+||+ +++|+||++++.+            .++++.+++|.+++++++++|++   +||+++
T Consensus       153 la~~~~v~~~~v~~~viGeHg~-~~~~~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii~---~kg~t~  228 (308)
T cd05292         153 LGEHLGVDPRSVHAYIIGEHGD-SEVAVWSSANIGGVPLDEFCKLCGRPFDEEVREEIFEEVRNAAYEIIE---RKGATY  228 (308)
T ss_pred             HHHHhCCCccceeceeeccCCC-cEEecceeeeECCEEHHHHhhhcccccCHHHHHHHHHHHHHHHHHHHH---cCCccH
Confidence            9999999999999999999999 9999999998642            23345688999999999999999   568999


Q ss_pred             chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 018618          266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  343 (353)
Q Consensus       266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~  343 (353)
                      |++|.++++++++|+++.+   .++|++ +++|+| .+++|||+||+||++|+++++++ +||++|+++|++|++.|++.
T Consensus       229 ~~~a~a~~~i~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~ig~~Gv~~i~~~-~L~~~E~~~l~~s~~~i~~~  304 (308)
T cd05292         229 YAIGLALARIVEAILRDEN---SVLTVSSLLDGQYGIKDVALSLPCIVGRSGVERVLPP-PLSEEEEEALRASAEVLKEA  304 (308)
T ss_pred             HHHHHHHHHHHHHHHcCCC---cEEEEEEEEcccCCCCCEEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999864   588987 689999 57999999999999999999996 99999999999999999987


Q ss_pred             HH
Q 018618          344 IQ  345 (353)
Q Consensus       344 ~~  345 (353)
                      ++
T Consensus       305 ~~  306 (308)
T cd05292         305 IE  306 (308)
T ss_pred             Hh
Confidence            75

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=100.00  E-value=1.8e-56  Score=428.90  Aligned_cols=296  Identities=24%  Similarity=0.325  Sum_probs=254.8

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      ||+||||+|+||+++++.|...++++     +|+|+|+++    ++++++||.|+..... ..+..+++.+++++|||+|
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~-~~~~~~~~~~~~~~~aDiV   79 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLL-DGVVPTHDPAVAFTDVDVA   79 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhc-CceeccCChHHHhCCCCEE
Confidence            69999999999999999999988875     799999954    6789999999873211 1122233546899999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhH
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV  191 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~  191 (353)
                      |+++|.|+++|++|.+++..|+++++++++.|.+++ |++++|++|||+|++|+++    ++.++++|.++||+ |.||+
T Consensus        80 VitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~----~~~sg~~~~~vig~gt~LDs  155 (324)
T TIGR01758        80 ILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVL----SNYAPSIPPKNFSALTRLDH  155 (324)
T ss_pred             EEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCcceEEEeeehHH
Confidence            999999999999999999999999999999999996 9999999999999998765    67777778889999 99999


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCC-C----C----CChHH--HHHHHHHHhcchhhhhhhhc
Q 018618          192 VRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP-C----S----FTQEE--TEYLTNRIQNGGTEVVEAKA  259 (353)
Q Consensus       192 ~R~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~-~----~----~~~~~--~~el~~~v~~~~~~i~~~~~  259 (353)
                      +|+|+++|+++|+++++|+ ++||||||+ +++|+||++++. +    +    ++++.  +++|.+++++++++|++.+ 
T Consensus       156 ~R~r~~la~~l~v~~~~V~~~~V~GeHG~-s~v~~~S~~~v~~g~~~~pl~~~~~~~~~~~~~i~~~v~~~g~~Ii~~k-  233 (324)
T TIGR01758       156 NRALAQVAERAGVPVSDVKNVIIWGNHSS-TQYPDVNHATVTKGGKQKPVREAIKDDAYLDGEFITTVQQRGAAIIRAR-  233 (324)
T ss_pred             HHHHHHHHHHhCCChhhceEeEEEECCCC-CcccccccceecCCCCccCHHHHhcchhhHHHHHHHHHHhCHHHHHhcc-
Confidence            9999999999999999995 699999999 999999999886 4    1    22222  5789999999999999953 


Q ss_pred             cCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCC-C--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018618          260 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  335 (353)
Q Consensus       260 gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~  335 (353)
                       +|++.|++|.++++++++|+++.. ++.++|++ +++|+ |  |+++|||+||++|++|++.+.++ +|+++|+++|++
T Consensus       234 -~~~t~~~ia~~~~~i~~ai~~~~~-~~~i~~vs~~~~g~~yg~~~~v~~s~P~~ig~g~~~~i~el-~L~~~E~~~l~~  310 (324)
T TIGR01758       234 -KLSSALSAAKAAVDQMHDWVLGTP-EGTFVSMGVYSDGSPYGVPKGLIFSFPVTCKNGEWKIVEGL-CVDDSSRKKLAL  310 (324)
T ss_pred             -CCCHHHHHHHHHHHHHHHHhcCCC-CCeEEEEEeecCCcccCCCCceEEEEEEEEcCCeEEEecCC-CCCHHHHHHHHH
Confidence             358999999999999999995433 23699998 68999 8  48999999999996666666665 999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 018618          336 AKKELAGSIQKGI  348 (353)
Q Consensus       336 s~~~l~~~~~~~~  348 (353)
                      |++.|++.+++++
T Consensus       311 s~~~lk~~~~~~~  323 (324)
T TIGR01758       311 TAKELEEERDEAL  323 (324)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999998875

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=100.00  E-value=1.5e-56  Score=430.18  Aligned_cols=296  Identities=24%  Similarity=0.330  Sum_probs=259.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALT  108 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~  108 (353)
                      +|.||+||||+|+||+++++.|+..++++     +|+|+|+++    +++.++|+.|+..  ...+..   +++++++++
T Consensus         1 ~~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~---~~~~~~~l~   77 (325)
T cd01336           1 EPIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVA---TTDPEEAFK   77 (325)
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCcee---cCCHHHHhC
Confidence            46899999999999999999999988764     999999954    5788899999752  123332   357779999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHh-CCCCCCceEee
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA-GTYDPKKLLGV  186 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~-~~~~~~kviG~  186 (353)
                      |||+||++||.+++++++|.+++..|+++++++++.|++++ |++++|++|||+|++|+++    ++. +++|+++ ||+
T Consensus        78 ~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~----~k~~~~~~~~~-ig~  152 (325)
T cd01336          78 DVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALIL----LKYAPSIPKEN-FTA  152 (325)
T ss_pred             CCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH----HHHcCCCCHHH-EEe
Confidence            99999999999999999999999999999999999999997 7999999999999998765    565 5787777 888


Q ss_pred             -chhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCC----C-C----CChHH--HHHHHHHHhcchhh
Q 018618          187 -TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPP----C-S----FTQEE--TEYLTNRIQNGGTE  253 (353)
Q Consensus       187 -t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~----~-~----~~~~~--~~el~~~v~~~~~~  253 (353)
                       |.||+.|+++++|+++++++++|+ .+||||||+ +++|+||++++.    + +    ++++.  +++|.+++++++++
T Consensus       153 gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~-s~~~~~S~~~v~~~~~g~~~~~~~~~~~~~~~~i~~~v~~~g~~  231 (325)
T cd01336         153 LTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVELNGKGKPAREAVKDDAWLNGEFISTVQKRGAA  231 (325)
T ss_pred             eehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC-CeeeccccceeecCCCCccHHHHhcccchhHHHHHHHHHhhHHH
Confidence             999999999999999999999996 559999999 999999999885    3 1    22322  58999999999999


Q ss_pred             hhhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHH
Q 018618          254 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYER  330 (353)
Q Consensus       254 i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~  330 (353)
                      |++.+  +|++.||+|.++++++++|++|.+. +.++|++ +++|+|  ++++|||+||++|++|+++++++ +|+++|+
T Consensus       232 Ii~~~--~g~t~~~~a~~~~~i~~ail~~~~~-~~v~~vs~~~~g~yg~~~~v~~s~P~~ig~~Gv~~i~~~-~L~~~E~  307 (325)
T cd01336         232 VIKAR--KLSSAMSAAKAICDHVHDWWFGTPE-GEFVSMGVYSDGSYGVPEGLIFSFPVTCKNGKWKIVQGL-SIDDFSR  307 (325)
T ss_pred             HHHcc--ccchHHHHHHHHHHHHHHHHcCCCC-CeEEEEEEecCCCcCCCCceEEEEEEEEeCCEEEEecCC-CCCHHHH
Confidence            99953  5799999999999999999998532 2588987 689999  48999999999999999999996 9999999


Q ss_pred             HHHHHHHHHHHHHHHHhh
Q 018618          331 IGLEKAKKELAGSIQKGI  348 (353)
Q Consensus       331 ~~l~~s~~~l~~~~~~~~  348 (353)
                      ++|++|++.|+++++.++
T Consensus       308 ~~l~~s~~~l~~e~~~~~  325 (325)
T cd01336         308 EKIDATAKELVEEKETAL  325 (325)
T ss_pred             HHHHHHHHHHHHHHHhhC
Confidence            999999999999998764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=100.00  E-value=6.2e-55  Score=416.78  Aligned_cols=290  Identities=26%  Similarity=0.430  Sum_probs=257.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      |||+|+||+|.+|++++..|+..|+..+|+|+|+++    +++.++|+.|...  ....+.. .++|+ +++++||+||+
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~-~~~d~-~~l~~aDiVii   78 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIK-ISSDL-SDVAGSDIVII   78 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEE-ECCCH-HHhCCCCEEEE
Confidence            699999988999999999999999988999999854    6788899988642  1222332 24565 67999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      ++|.|+++|++|.+++..|+++++++++.|.+++|++++|+++||+|++|+++    ++.+++|++|+||+ |.||+.|+
T Consensus        79 tag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd~~t~~~----~~~~g~~~~~viG~gt~LDs~R~  154 (309)
T cd05294          79 TAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVDVMTYKA----LKESGFDKNRVFGLGTHLDSLRF  154 (309)
T ss_pred             ecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHhcCCCHHHEeeccchHHHHHH
Confidence            99999999999999999999999999999999999999999999999998764    67789999999999 79999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----C--CChHHHHHHHHHHhcchhhhhhhhccCCcccch
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----S--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS  267 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~--~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s  267 (353)
                      ++.||+++++++++|+++|+|+||+ +++|+||++++.+     .  +.+.+++++.+++++++++|++   +||++.||
T Consensus       155 ~~~la~~l~v~~~~v~~~viGeHg~-s~~~~~S~~~i~g~~~~~~~~~~~~~~~~i~~~v~~~g~~i~~---~kg~t~~~  230 (309)
T cd05294         155 KVAIAKHFNVHISEVHTRIIGEHGD-SMVPLISSTSIGGIPIKRFPEYKDFDVEKIVETVKNAGQNIIS---LKGGSEYG  230 (309)
T ss_pred             HHHHHHHHCcChHHeEEEEEecCCC-ceEeeeeecEECCEEHHHhhcccHHHHHHHHHHHHHHHHHHHH---hcCCchhh
Confidence            9999999999999999999999999 9999999998743     1  2244578999999999999999   45788999


Q ss_pred             HHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          268 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       268 ~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      +|.++++++++|++|++   .+++++ +++|+|  .+++++|+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       231 ~a~~~~~ii~ail~~~~---~v~~vsv~~~g~~~~~~~~~~svP~~ig~~Gv~~i~~l-~l~~~E~~~l~~s~~~i~~~~  306 (309)
T cd05294         231 PASAISNLVRTIANDER---RILTVSTYLEGEIDGIRDVCIGVPVKLGKNGIEEIVPI-EMDDDEREAFRKSAEIVKKYT  306 (309)
T ss_pred             HHHHHHHHHHHHHCCCC---eEEEEEEEECCccCCCCCeEEEeEEEEcCCccEEEeCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999875   588886 688987  34899999999999999999996 999999999999999999876


Q ss_pred             H
Q 018618          345 Q  345 (353)
Q Consensus       345 ~  345 (353)
                      +
T Consensus       307 ~  307 (309)
T cd05294         307 R  307 (309)
T ss_pred             h
Confidence            5

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=100.00  E-value=8.4e-55  Score=414.92  Aligned_cols=287  Identities=34%  Similarity=0.576  Sum_probs=256.8

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |+|||| |.||+.+++.++..++. +|+|+|+++  +++.++|+.|...  ....+.. .++|+ ++++|||+||+++|.
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~-eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~-~t~d~-~~l~dADiVIit~g~   76 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELG-DVVLLDIVEGLPQGKALDISQAAPILGSDTKVT-GTNDY-EDIAGSDVVVITAGI   76 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCc-EEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEE-EcCCH-HHhCCCCEEEEecCC
Confidence            689999 99999999999999888 999999988  6778888887642  1222332 24575 679999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHH
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFV  198 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~l  198 (353)
                      |+++|++|.+.+.+|++++++++++|++++|++++|++|||+|++|+++    ++++++|++|++|+ |.||+.|+++.+
T Consensus        77 p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sNP~di~t~~~----~~~s~~~~~rviGlgt~lds~r~~~~l  152 (300)
T cd01339          77 PRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTNPLDVMTYVA----YKASGFPRNRVIGMAGVLDSARFRYFI  152 (300)
T ss_pred             CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCHHHEEEecchHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998765    57789999999999 599999999999


Q ss_pred             HHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHH
Q 018618          199 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV  273 (353)
Q Consensus       199 A~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~  273 (353)
                      |+++++++++|+++|+|+||+ +++|+||++++.+     .++++.++++.+++++++++|++.+ |+|+++|++|.+++
T Consensus       153 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~~~~ii~~k-~~g~t~~~~a~~~~  230 (300)
T cd01339         153 AEELGVSVKDVQAMVLGGHGD-TMVPLPRYSTVGGIPLTELITKEEIDEIVERTRNGGAEIVNLL-KTGSAYYAPAAAIA  230 (300)
T ss_pred             HHHhCCCccceEEEEEeCCCC-cceecceecEECCEEHHHhcChHHHHHHHHHHHHHHHHHHhhc-CCCchhHHHHHHHH
Confidence            999999999999999999999 9999999998853     2445568999999999999999976 77999999999999


Q ss_pred             HHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          274 KFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       274 ~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      +++++|+.|++   .++|++ +++|+| .++++||+||++|++|+++++++ +||++|+++|++|++.|++.+
T Consensus       231 ~i~~ail~~~~---~i~~~s~~~~g~yg~~~~~~s~P~~ig~~G~~~~~~l-~l~~~E~~~l~~s~~~l~~~~  299 (300)
T cd01339         231 EMVEAILKDKK---RVLPCSAYLEGEYGIKDIFVGVPVVLGKNGVEKIIEL-DLTDEEKEAFDKSVESVKELI  299 (300)
T ss_pred             HHHHHHHcCCC---cEEEEEEEeccccCCCCeEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHh
Confidence            99999999864   588998 789999 56999999999999999999996 999999999999999999765

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PRK06223 malate dehydrogenase; Reviewed

Probab=100.00  E-value=2.2e-54  Score=413.22  Aligned_cols=292  Identities=32%  Similarity=0.561  Sum_probs=260.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      ++||+|||| |+||+++++.++..++. +|+|+|+++  +++.++|+.|....  ...+.. .++|+ +++++||+||++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~-ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~-~~~d~-~~~~~aDiVii~   77 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELG-DVVLFDIVEGVPQGKALDIAEAAPVEGFDTKIT-GTNDY-EDIAGSDVVVIT   77 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCe-EEEEEECCCchhHHHHHHHHhhhhhcCCCcEEE-eCCCH-HHHCCCCEEEEC
Confidence            479999999 99999999999999887 999999987  67888888876421  122322 34676 679999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  195 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~  195 (353)
                      +|.|+++|++|.+.+.+|+++++++++.|++++|++++|++|||+|++|+++    ++++++|++|++|+ |.||+.|++
T Consensus        78 ~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~----~~~s~~~~~~viG~gt~lds~r~~  153 (307)
T PRK06223         78 AGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVA----LKESGFPKNRVIGMAGVLDSARFR  153 (307)
T ss_pred             CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCcccEEEeCCCcHHHHHH
Confidence            9999999999999999999999999999999999999999999999998765    57789999999999 699999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHH
Q 018618          196 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAY  270 (353)
Q Consensus       196 ~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~  270 (353)
                      +.||+++++++++|+++|+|+||+ +++|+||.+++.+     .++++.+++|.+.+++++++|++.+ +||++.|++|.
T Consensus       154 ~~la~~l~v~~~~v~~~viGehg~-s~~p~~S~~~v~g~~~~~~~~~~~~~~l~~~v~~~~~~ii~~~-~kg~t~~~~A~  231 (307)
T PRK06223        154 TFIAEELNVSVKDVTAFVLGGHGD-SMVPLVRYSTVGGIPLEDLLSKEKLDEIVERTRKGGAEIVGLL-KTGSAYYAPAA  231 (307)
T ss_pred             HHHHHHhCcChhhCcccEEcCCCC-cceEchhhCEECCEEHHHhCChHHHHHHHHHHHHHHHHHHhhc-ccCChhHHHHH
Confidence            999999999999999999999999 9999999998743     1455557899999999999999964 57899999999


Q ss_pred             HHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018618          271 AAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  346 (353)
Q Consensus       271 a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~  346 (353)
                      ++++++++|+.+.+   .+++++ +++|+| .++++||+||++|++|+++++++ +||++|+++|++|+++|++.++.
T Consensus       232 ~~~~ii~ail~~~~---~~~~~~v~~~g~yg~~~~~~s~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~  305 (307)
T PRK06223        232 SIAEMVEAILKDKK---RVLPCSAYLEGEYGVKDVYVGVPVKLGKNGVEKIIEL-ELDDEEKAAFDKSVEAVKKLIEA  305 (307)
T ss_pred             HHHHHHHHHHcCCC---cEEEEEEEecCcCCCCCeEEEeEEEEeCCeEEEEeCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999998754   588887 789998 67999999999999999999996 99999999999999999988764

>cd05295 MDH_like Malate dehydrogenase-like

Probab=100.00  E-value=4.3e-55  Score=430.61  Aligned_cols=295  Identities=16%  Similarity=0.129  Sum_probs=255.7

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCC-----cEEEEEeCC--C--cHHHHHHHhcCCCC--CeEEEEeCCCchhhh
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV--N--TPGVTADISHMDTG--AVVRGFLGQPQLENA  106 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~-----~el~L~D~~--~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~a  106 (353)
                      -.+|.+|+|+||+|++|+++.+.++.++++     ..|+|+|++  .  ++|.++||.|+.+.  ..+...  +++ +++
T Consensus       120 ~~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~--~~~-~ea  196 (452)
T cd05295         120 KINPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT--TDL-DVA  196 (452)
T ss_pred             CCCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE--ECC-HHH
Confidence            345789999999999999999999987543     479999994  3  79999999998731  234443  234 699


Q ss_pred             hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC--CcEEEEecCCCCchhHHHHHHHHHhC-CCCCCce
Q 018618          107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKL  183 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kv  183 (353)
                      ++|||+||+++|.|+++||+|.|++..|+++++++++.|.+++|  ++++|++|||+|++|+++    ++.+ ++|++||
T Consensus       197 ~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~----~k~apgiP~~rV  272 (452)
T cd05295         197 FKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSIL----IKYAPSIPRKNI  272 (452)
T ss_pred             hCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH----HHHcCCCCHHHE
Confidence            99999999999999999999999999999999999999999998  889999999999999775    4555 9999999


Q ss_pred             EeechhhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCC-------------C----CChHH--HHHH
Q 018618          184 LGVTMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC-------------S----FTQEE--TEYL  243 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~-------------~----~~~~~--~~el  243 (353)
                      +|++.+|++|++++||+++||++++| +++||||||+ ++||+||++++.+             .    +.+++  .+++
T Consensus       273 ig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~-sqvpd~S~a~V~G~~~a~~~p~~~~~pl~e~i~d~~w~~~~~  351 (452)
T cd05295         273 IAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG-NTYIDLSKARVYRYDSAIWGPPNYSRPVLELVHDSKWINGEF  351 (452)
T ss_pred             EEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC-ceeeeeeEEEEcccccccccccccCccHHHHhcchhhhHHHH
Confidence            99966889999999999999999999 6799999999 9999999998742             1    23333  2677


Q ss_pred             HHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEc
Q 018618          244 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIF  320 (353)
Q Consensus       244 ~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~  320 (353)
                      .+.+++++.   +   +||++.||+|.|+++++++|++|++.+ .++|++ +++|+|  |+|++||+||++|++|++.+.
T Consensus       352 ~~~v~~rg~---~---rkgsT~~siA~A~~~iv~ail~~t~~~-~ilsvsv~sdG~YGip~gv~~S~Pviig~~Gve~V~  424 (452)
T cd05295         352 VATLKSLSS---S---LNHEAAISPAHAIATTLSYWYHGSPPG-EIFSLGVISEGWYGIPEGIVFSMPVKFQNGSWEVVT  424 (452)
T ss_pred             HHHHHHHHH---h---ccCChHHHHHHHHHHHHHHHHhCCCCC-eEEEEEEeeccccCCcCCEEEEEEEEEeCCeEEEEe
Confidence            888888877   2   578999999999999999999997522 588887 789999  689999999999999999999


Q ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 018618          321 QLGPLNEYERIGLEKAKKELAGSIQKGI  348 (353)
Q Consensus       321 ~~~~L~~~E~~~l~~s~~~l~~~~~~~~  348 (353)
                      .+ +|+++|+++|++|+++|.++.+.++
T Consensus       425 ~L-~L~e~E~~kL~~S~~eL~~E~~~~~  451 (452)
T cd05295         425 DL-ELSEILREVLKRITSDLIQEKLVAL  451 (452)
T ss_pred             CC-CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence            96 9999999999999999999887653

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00135 malate dehydrogenase

Probab=100.00  E-value=1.4e-54  Score=412.27  Aligned_cols=272  Identities=22%  Similarity=0.321  Sum_probs=241.3

Q ss_pred             EEEEEeCCC----cHHHHHHHhcCCC-C-CeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHH
Q 018618           69 VLHLYDVVN----TPGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLC  142 (353)
Q Consensus        69 el~L~D~~~----~~~~~~dl~~~~~-~-~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~  142 (353)
                      .|+|+|+++    ++|+++||.|+.. . ..+..   ++|.+++++|||+||+++|.|+++|++|.|++..|++++++++
T Consensus        15 ~l~L~D~~~~~~~a~g~~~Dl~da~~~~~~~i~~---~~~~y~~~~daDiVVitAG~~~k~g~sR~dll~~N~~I~~~i~   91 (309)
T PLN00135         15 ILHMLDIPPAAEALNGVKMELIDAAFPLLKGVVA---TTDVVEACKGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQA   91 (309)
T ss_pred             EEEEecCcccccchhhHHHHHHhhhHHhcCCcEe---cCCHHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            899999876    6899999999863 1 23332   3454589999999999999999999999999999999999999


Q ss_pred             HHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHHHHHhCCCCCCC-cceEEeecCC
Q 018618          143 EGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAG  219 (353)
Q Consensus       143 ~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~  219 (353)
                      +.|.++ +|++++|++|||+|++|+++    ++.+++|++|+||+ |.||++|||+++|+++|+++++| +++||||||+
T Consensus        92 ~~i~~~~~p~aivivvsNPvDv~t~~~----~~~sg~~~~~vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~VlGeHG~  167 (309)
T PLN00135         92 SALEKHAAPDCKVLVVANPANTNALIL----KEFAPSIPEKNITCLTRLDHNRALGQISERLGVPVSDVKNVIIWGNHSS  167 (309)
T ss_pred             HHHHHhcCCCeEEEEeCCcHHHHHHHH----HHHcCCCCccEEEeeehHHHHHHHHHHHHHhCcChhhceeeEEEEcCCC
Confidence            999996 89999999999999998765    67789999999999 99999999999999999999999 7999999999


Q ss_pred             CccccccccCCC----CC-C----CChHH--HHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHHHhccCCCCe
Q 018618          220 VTILPLLSQVKP----PC-S----FTQEE--TEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAG  288 (353)
Q Consensus       220 ~~~vp~~s~~~v----~~-~----~~~~~--~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~  288 (353)
                       +++|+||++++    .+ .    +.+++  .++|.+++++++++|++.  +||+|+||+|.++++++++|+++++ ++.
T Consensus       168 -s~v~~~S~a~v~~~~~g~p~~e~~~~~~~~~~~i~~~v~~~g~~Ii~~--~kg~t~~~ia~a~~~iv~ai~~~~~-~~~  243 (309)
T PLN00135        168 -TQYPDVNHATVKTPSGEKPVRELVADDAWLNGEFITTVQQRGAAIIKA--RKLSSALSAASSACDHIRDWVLGTP-EGT  243 (309)
T ss_pred             -ceeeccccceEecCCCCcCHHHHhCchhhHHHHHHHHHHHHHHHHHHc--cCccHHHHHHHHHHHHHHHHHhCCc-CCe
Confidence             99999999998    43 1    23333  589999999999999995  2679999999999999999998542 235


Q ss_pred             EEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018618          289 VVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK  352 (353)
Q Consensus       289 v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~  352 (353)
                      ++|++ +++|+|  +++++||+||++|++|++.++++ +|+++|+++|++|++.|+++.+++++.|+
T Consensus       244 v~~vsv~~~g~YGi~~~v~~s~P~vlg~~gve~v~~l-~L~~~E~~~l~~S~~~lk~~~~~~~~~~~  309 (309)
T PLN00135        244 WVSMGVYSDGSYGVPPGLIYSFPVTCEKGEWSIVQGL-SIDEFSRKKMDATAKELKEEKELAYSCLS  309 (309)
T ss_pred             EEEEEEEecCccCCcCCeEEEEEEEEECCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            88997 689999  48999999999999999999896 99999999999999999999999998774

>TIGR01756 LDH_protist lactate dehydrogenase

Probab=100.00  E-value=1.5e-53  Score=406.11  Aligned_cols=271  Identities=21%  Similarity=0.271  Sum_probs=237.4

Q ss_pred             EEEEEeCCC----cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 018618           69 VLHLYDVVN----TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCE  143 (353)
Q Consensus        69 el~L~D~~~----~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~  143 (353)
                      .|+|+|+++    ++|+++||.|+.+ .......  ++|++++++|||+||+|+|.|+++|++|.|++..|+++++++++
T Consensus        17 ~l~L~D~~~~~~~a~g~a~Dl~d~~~~~~~~~i~--~~~~~~~~~daDiVVitaG~~~k~g~tR~dll~~N~~I~~~i~~   94 (313)
T TIGR01756        17 CLHLLEIPPALNRLEALAMELEDCAFPNLAGTIV--TTKLEEAFKDIDCAFLVASVPLKPGEVRADLLTKNTPIFKATGE   94 (313)
T ss_pred             EEEEecCCCccchhHhHHHHHHHhccccCCceEe--cCCHHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHH
Confidence            899999977    6899999999972 1222222  46777899999999999999999999999999999999999999


Q ss_pred             HHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHHHHHHhCCCCCCCcc-eEEeecCCC
Q 018618          144 GIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGV  220 (353)
Q Consensus       144 ~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~lA~~l~v~~~~v~~-~viG~hg~~  220 (353)
                      .|.+++| ++++|++|||+|++|+++.   ++.+|+|++ +||+ |.||++||++.+|++++++|++|+. +||||||+ 
T Consensus        95 ~i~~~a~~~~ivivvtNPvDv~t~v~~---~~~sg~p~~-vig~gt~LDsaR~r~~la~~l~v~~~~V~~~~V~GeHG~-  169 (313)
T TIGR01756        95 ALSEYAKPTVKVLVIGNPVNTNCLVAM---LHAPKLSAE-NFSSLCMLDHNRAVSRIASKLKVPVDHIYHVVVWGNHAE-  169 (313)
T ss_pred             HHHhhCCCCeEEEEeCCchHHHHHHHH---HHcCCCCHH-HEEecccHHHHHHHHHHHHHhCcChhheeeeEEEECCCC-
Confidence            9999995 5889999999999987642   588999999 9999 9999999999999999999999965 59999999 


Q ss_pred             ccccccccCCC--CC-C------CChH-HHHHHHHHHhcchhhhhhhhccCCcccchHH-HHHHHHHHHHHhccCCCCeE
Q 018618          221 TILPLLSQVKP--PC-S------FTQE-ETEYLTNRIQNGGTEVVEAKAGAGSATLSMA-YAAVKFADACLRGLRGDAGV  289 (353)
Q Consensus       221 ~~vp~~s~~~v--~~-~------~~~~-~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A-~a~~~li~ai~~~~~~~~~v  289 (353)
                      +++|+||++++  .+ .      ++++ .++++.+++++++++|++   +||+|+|+++ .++++++++|++|++. +.+
T Consensus       170 s~vp~~S~~~V~~~G~~~~~~~~~~~~~~~~~i~~~v~~~g~~Ii~---~kg~t~~~~~a~ai~~iv~ail~~~~~-~~i  245 (313)
T TIGR01756       170 SMVADLTHAEFTKNGKHQKVFDELCRDYPEPDFFEVIAQRAWKILE---MRGFTSAASPVKASLQHMKAWLFGTRP-GEV  245 (313)
T ss_pred             ceeecccccEEecCCeehhHhhhcCcHhHHHHHHHHHHHHHHHHHh---CcCCcchHHHHHHHHHHHHHHhcCCCC-CeE
Confidence            99999999988  43 1      2331 368999999999999999   6789999977 6999999999997653 359


Q ss_pred             EEee-eee--CCC--CCccEEEEEEEEcCCceEEEcc-CCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 018618          290 VECA-FVA--SQV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYERIGLEKAKKELAGSIQKGISFS  351 (353)
Q Consensus       290 ~~~~-~~~--g~~--~~~~~~s~Pv~ig~~Gv~~v~~-~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~  351 (353)
                      +|++ +++  |+|  ++|++||+||++|++|++++++ + +|+++|+++|++|+..|+++.+.+++.|
T Consensus       246 ~pvsv~l~~~g~YGi~~~v~~s~P~vig~~Gv~~ive~l-~L~~~E~~~l~~Sa~~l~~e~~~~~~~~  312 (313)
T TIGR01756       246 LSMGIPVPEGNPYGIKPGVIFSFPCTVDEDGKVHVVENF-ELNPWLKTKLAQTEKDLFEERETALKAL  312 (313)
T ss_pred             EEEEEEecCCCccCCCCCEEEEEEEEEeCCceEEEcCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9998 575  388  3799999999999999999999 6 9999999999999999999999998765

This model represents a family of protist lactate dehydrogenases which have aparrently evolved from a recent protist malate dehydrogenase ancestor. Lactate dehydrogenase converts the hydroxyl at C-2 of lactate to a carbonyl in the product, pyruvate. The preference of this enzyme for NAD or NADP has not been determined. A critical residue in malate dehydrogenase, arginine-91 (T. vaginalis numbering) has been mutated to a leucine, eliminating the positive charge which complemeted the carboxylate in malate which is absent in lactate. Several other more subtle changes are proposed to make the active site smaller to accomadate the less bulky lactate molecule.

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=100.00  E-value=4.1e-50  Score=375.91  Aligned_cols=254  Identities=29%  Similarity=0.441  Sum_probs=229.5

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCC--CCcEEEEEeCCC--cHHHHHHHhcCCCCC-eEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~--~~~el~L~D~~~--~~~~~~dl~~~~~~~-~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |+||||+|.+|+++++.|+..+  ...+|+|+|+++  +++.++|++|..... ..+.. .++|++++++|||+||+++|
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~-~~~d~~~~~~~aDiVv~t~~   79 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS-ITDDPYEAFKDADVVIITAG   79 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE-ECCchHHHhCCCCEEEECCC
Confidence            6899998999999999999998  778999999987  788999999886432 23333 35788899999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV  198 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~l  198 (353)
                      .++++|++|.+++.+|++++++++++|+++||++|+|++|||+|++|+++    ++.+|+|++|+||+|.+|+.|+++.+
T Consensus        80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~tNP~d~~t~~~----~~~sg~~~~kviG~~~ld~~r~~~~l  155 (263)
T cd00650          80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVSNPVDIITYLV----WRYSGLPKEKVIGLGTLDPIRFRRIL  155 (263)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----HHHhCCCchhEEEeecchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998764    67789999999999449999999999


Q ss_pred             HHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHH
Q 018618          199 AEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA  278 (353)
Q Consensus       199 A~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~a  278 (353)
                      |+++|+++++|+++|||+||+ +++|+||+++                                     +|.++++++++
T Consensus       156 a~~l~v~~~~v~~~v~G~hg~-~~~~~~s~~~-------------------------------------~a~~~~~ii~a  197 (263)
T cd00650         156 AEKLGVDPDDVKVYILGEHGG-SQVPDWSTVR-------------------------------------IATSIADLIRS  197 (263)
T ss_pred             HHHhCCCccceEEEEEEcCCC-ceEeccccch-------------------------------------HHHHHHHHHHH
Confidence            999999999999999999999 8999999754                                     67899999999


Q ss_pred             HHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          279 CLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       279 i~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      |++|.+   .+++++ +++|+|  +++++||+||++|++|+++++++ +|+++|+++|+++++.++..+
T Consensus       198 i~~~~~---~~~~v~v~~~g~ygi~~~~~~s~P~~i~~~Gi~~~~~~-~l~~~e~~~l~~s~~~~~~~~  262 (263)
T cd00650         198 LLNDEG---EILPVGVRNNGQIGIPDDVVVSVPCIVGKNGVEEPIEV-GLTDFELEKLQKSADTLKKEL  262 (263)
T ss_pred             HHcCCC---EEEEEEEEeCCccCCcCCEEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHh
Confidence            999854   578887 689998  58999999999999999999995 999999999999999999765

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=9.3e-48  Score=341.60  Aligned_cols=305  Identities=25%  Similarity=0.352  Sum_probs=273.9

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCC-----CCcEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~-----~~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~  109 (353)
                      +++.+|.|+||+|++|+++.+.++..-     ....++|+|+.+    ++|.+++|+++.+ |.++....++|..++|+|
T Consensus         2 ~epirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~~~~~~LegV~mELqD~a~-PlL~~Vvattd~~~afkd   80 (332)
T KOG1496|consen    2 KEPIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIPPMMSVLEGVKMELQDCAL-PLLKGVVATTDEVEAFKD   80 (332)
T ss_pred             CCceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCchHHHHHHHHHHHHHhhhh-hHHHhhhcccChhhhhcc
Confidence            357899999999999999999998752     235899999987    6899999999985 555554457888999999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeech
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM  188 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~  188 (353)
                      .|+.|+.+++||++||+|.|++..|+.|++..+..+++|+ |+++|++++||+|..+.++.   +.++.+|.+++-.+|.
T Consensus        81 v~~ailvGa~PR~eGMERkDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPaNTNali~~---k~ApsIP~kNfs~lTR  157 (332)
T KOG1496|consen   81 VDVAILVGAMPRREGMERKDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPANTNALILK---KFAPSIPEKNFSALTR  157 (332)
T ss_pred             CcEEEEeccccCcccchhhhHHhhcceeehhhhHHHHHhcCCCceEEEecCccccchhHHh---hhCCCCchhcchhhhh
Confidence            9999999999999999999999999999999999999999 89999999999999987764   5678999999999999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCC---------CCChHHH--HHHHHHHhcchhhhhh
Q 018618          189 LDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPC---------SFTQEET--EYLTNRIQNGGTEVVE  256 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~---------~~~~~~~--~el~~~v~~~~~~i~~  256 (353)
                      ||++|+..++|.++||+.++| ++.|||+|+. |++|+..++++..         -++|+.|  .++...|++||..+++
T Consensus       158 LDhNRA~~QlA~klgv~~~~VkNviIWGNHSs-TQyPD~~hA~V~~~~~~~~v~e~v~d~~wL~g~Fi~tVQkRGaavi~  236 (332)
T KOG1496|consen  158 LDHNRALAQLALKLGVPVSDVKNVIIWGNHSS-TQYPDVNHATVNTNGGEKPVKEAVKDDAWLQGEFIETVQKRGAAVIK  236 (332)
T ss_pred             hchhhHHHHHHHhhCCchhhcceeEEeccccc-ccCCCccceeeeccCCcccHHHHhccchhhccchhhHHHhcchHhhh
Confidence            999999999999999999999 8999999999 9999999999842         2566667  6899999999999999


Q ss_pred             hhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHH
Q 018618          257 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL  333 (353)
Q Consensus       257 ~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l  333 (353)
                      .+  |-++.+|.|.+++++++.|+.+++.+. +++++ +.+|.|  |++..||+||++ ++|-|++++..+++++-++++
T Consensus       237 ar--k~SSA~SaA~aacDhi~dw~~gTpeG~-fvSmgV~sDGsYgip~gli~SfPv~~-k~g~wkiVqgl~iddf~r~km  312 (332)
T KOG1496|consen  237 AR--KLSSAMSAAKAACDHIRDWWFGTPEGT-FVSMGVYSDGSYGIPDGLIFSFPVTI-KNGDWKIVQGLPIDDFSREKM  312 (332)
T ss_pred             hh--hhhhhhhHHHhHhhhhhheecCCCCcc-EEEEeeecCCCCCCCCCeEEEcceEe-cCCceEEEcCcchhHHHHHhh
Confidence            75  468899999999999999999998654 66665 789999  889999999999 689999999889999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhc
Q 018618          334 EKAKKELAGSIQKGISFSK  352 (353)
Q Consensus       334 ~~s~~~l~~~~~~~~~~~~  352 (353)
                      ..++++|+++.+.++.+++
T Consensus       313 ~~t~~EL~eEkd~a~~~l~  331 (332)
T KOG1496|consen  313 DLTAKELKEEKDLAYSCLS  331 (332)
T ss_pred             hhhHHHHHHhHHHHHHhhc
Confidence            9999999999999998775

>PF02866 Ldh_1_C: lactate/malate dehydrogenase, alpha/beta C-terminal domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR022383 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=100.00  E-value=2e-33  Score=247.47  Aligned_cols=159  Identities=35%  Similarity=0.570  Sum_probs=145.1

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCC-----------CCCChHHHHHHHHHHhcchhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP-----------CSFTQEETEYLTNRIQNGGTEVV  255 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~-----------~~~~~~~~~el~~~v~~~~~~i~  255 (353)
                      |.||++|+++++|+++|++|.+++++|||+||+ +++|+||++++.           ..++++++++|.+++++++++|+
T Consensus         1 T~LDs~R~~~~la~~l~v~~~~v~~~ViGeHg~-s~~~~~S~~~v~g~pl~~~~~~~~~~~~~~~~~l~~~v~~~g~~ii   79 (174)
T PF02866_consen    1 TMLDSARFRYFLAEKLGVNPSSVNAYVIGEHGD-SQVPDWSHAKVGGVPLLSYAKPSGKLSEEELEELTERVRKAGYEII   79 (174)
T ss_dssp             THHHHHHHHHHHHHHHTSGGGGEEEEEEBSSST-TEEEEGGGEEETTEEHHHHHHTTTSSSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCccceEEEEEecCCc-ceeeeeecccccccccccccccccchhHHhhhccccccEeccceee
Confidence            689999999999999999999999999999999 999999999874           24667778999999999999999


Q ss_pred             hhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-C-Cc-cEEEEEEEEcCCceEEEccCCCCCHHHHH
Q 018618          256 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-T-EL-PFFASKVRLGRQGAEEIFQLGPLNEYERI  331 (353)
Q Consensus       256 ~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~-~~-~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~  331 (353)
                      +.| + |+++||+|.|+++++++|++|.+   .++|++ +.+|+| . ++ +|||+||++|++|++++++.++||++|++
T Consensus        80 ~~k-~-g~t~~s~A~a~~~~v~ail~~~~---~i~~~sv~~~g~yg~~~~~v~~s~P~~ig~~Gv~~i~~~~~L~~~E~~  154 (174)
T PF02866_consen   80 KAK-G-GSTSYSIAAAAARIVEAILKDER---RILPVSVYLDGEYGIPDGCVYFSVPVVIGKNGVEKIVEDLPLSEEEQE  154 (174)
T ss_dssp             HHH-S-SSCHHHHHHHHHHHHHHHHTTHT---EEEEEEEEEESGGGEESSSEEEEEEEEEETTEEEEEECSBSSTHHHHH
T ss_pred             eec-c-ccCcCCHHHHHHHHHHHHhhccc---ccccceeccccccCcccccceecceEEEcCCeeEEEeCCCCCCHHHHH
Confidence            965 2 89999999999999999999985   588887 689999 3 34 99999999999999999994499999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhh
Q 018618          332 GLEKAKKELAGSIQKGISFS  351 (353)
Q Consensus       332 ~l~~s~~~l~~~~~~~~~~~  351 (353)
                      +|++|++.|++.++.+++|+
T Consensus       155 ~l~~sa~~l~~~i~~~~~f~  174 (174)
T PF02866_consen  155 KLKESAKELKKEIEKGLEFV  174 (174)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999985

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the C-terminal, and is thought to be an is an unusual alpha+beta fold.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0055114 oxidation-reduction process; PDB: 4MDH_B 5MDH_A 1GV0_A 1GUZ_D 2EWD_B 2FRM_D 2FNZ_B 2FN7_B 2FM3_A 1LTH_T ....

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=99.97  E-value=5.4e-32  Score=230.31  Aligned_cols=139  Identities=38%  Similarity=0.602  Sum_probs=123.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||+||||+|.||+++++.|+++++++||+|+|+++  ++|+++||+|+...........+.+ +++++|||+||+++|.
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~-~~~~~~aDivvitag~   79 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGD-YEALKDADIVVITAGV   79 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESS-GGGGTTESEEEETTST
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccccc-ccccccccEEEEeccc
Confidence            799999999999999999999999999999999996  8999999999864332222222344 6899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      ++++|++|.+++..|+++++++++++.+++|+++++++|||+|++|++    +++.+++|++|+||
T Consensus        80 ~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvtNPvd~~t~~----~~~~s~~~~~kviG  141 (141)
T PF00056_consen   80 PRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVTNPVDVMTYV----AQKYSGFPPNKVIG  141 (141)
T ss_dssp             SSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-SSSHHHHHHH----HHHHHTSSGGGEEE
T ss_pred             cccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeCCcHHHHHHH----HHHhhCcCcccCcC
Confidence            999999999999999999999999999999999999999999999765    47888999999998

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK15076 alpha-galactosidase; Provisional

Probab=99.97  E-value=2.5e-29  Score=249.74  Aligned_cols=291  Identities=17%  Similarity=0.154  Sum_probs=196.5

Q ss_pred             CCeEEEEcCCCCcHHHHHH--HHH-hCCCC-cEEEEEeCCC--cH-HHHHHHhcCC--CCCeEEEEeCCCchhhhhCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAM--LMK-INPLV-SVLHLYDVVN--TP-GVTADISHMD--TGAVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~--~l~-~~~~~-~el~L~D~~~--~~-~~~~dl~~~~--~~~~v~~~~~t~d~~~al~~AD  111 (353)
                      ++||+|||| |++|++.++  .++ ..++. .||+|+|+++  ++ +.++ +.+..  .....+.. .++|+++|++|||
T Consensus         1 ~~KIaIIGa-Gsvg~~~~~~~~i~~~~~l~~~evvLvDid~er~~~~~~l-~~~~~~~~~~~~~i~-~ttD~~eal~dAD   77 (431)
T PRK15076          1 MPKITFIGA-GSTVFTKNLLGDILSVPALRDAEIALMDIDPERLEESEIV-ARKLAESLGASAKIT-ATTDRREALQGAD   77 (431)
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHhhCccCCCCEEEEECCCHHHHHHHHHH-HHHHHHhcCCCeEEE-EECCHHHHhCCCC
Confidence            369999999 999999877  665 34454 4999999987  32 3333 33321  12233433 3578889999999


Q ss_pred             EEEEcCCCC-CCCC--------------CCHHHH--------HHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHH
Q 018618          112 LVIIPAGVP-RKPG--------------MTRDDL--------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA  168 (353)
Q Consensus       112 iVIi~ag~~-~~~g--------------~~r~~~--------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~  168 (353)
                      +||++++.+ ++++              ++|.+.        +.+|+++++++++.|+++||+||+|++|||++++|+.+
T Consensus        78 fVv~ti~vg~~~~~~~~De~Iplk~G~~~~r~et~G~GG~~~~~r~i~~i~~i~~~i~~~~p~a~iin~tNP~divt~~~  157 (431)
T PRK15076         78 YVINAIQVGGYEPCTVTDFEIPKKYGLRQTIGDTLGIGGIMRALRTIPVLLDICEDMEEVCPDALLLNYVNPMAMNTWAM  157 (431)
T ss_pred             EEeEeeeeCCcchhhhhhhhhHHHcCCeeecccCcCccchhhhhhhHHHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHH
Confidence            999998876 3434              445565        89999999999999999999999999999999998653


Q ss_pred             HHHHHHhCCCCCCceEeec--hhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------Ccccccccc---C----
Q 018618          169 AEVFKKAGTYDPKKLLGVT--MLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ---V----  229 (353)
Q Consensus       169 ~~~~~~~~~~~~~kviG~t--~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~---------~~~vp~~s~---~----  229 (353)
                          +   ++|+.||||+|  .+++.   +.+|+.+|+++++|++++.| ||..         ++.+|.+..   .    
T Consensus       158 ----~---~~~~~rviG~c~~~~~~~---~~ia~~l~v~~~~v~~~~~GlNH~~W~~~~~~~G~D~~p~l~~~~~~~~~~  227 (431)
T PRK15076        158 ----N---RYPGIKTVGLCHSVQGTA---EQLARDLGVPPEELRYRCAGINHMAWYLELERKGEDLYPELRAAAAEGQTR  227 (431)
T ss_pred             ----h---cCCCCCEEEECCCHHHHH---HHHHHHhCCCHHHeEEEEEeecchhhheeeeECCcchHHHHHHHHhccCch
Confidence                3   67889999997  45553   88999999999999999999 4443         234442111   0    


Q ss_pred             ---CC-----------CC-----------CC----ChHHHHHHH----HHHh------cchhhhh-hhhccCCcccchHH
Q 018618          230 ---KP-----------PC-----------SF----TQEETEYLT----NRIQ------NGGTEVV-EAKAGAGSATLSMA  269 (353)
Q Consensus       230 ---~v-----------~~-----------~~----~~~~~~el~----~~v~------~~~~~i~-~~~~gkg~~~~s~A  269 (353)
                         .+           +.           .+    .++..+++.    +..+      ....+.. +.+.++....-..+
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~y~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (431)
T PRK15076        228 CQDKVRYEMLKRFGYFVTESSEHFAEYVPWFIKPGRPDLIERFNIPLDEYPRRCEEQIANWEKEREELANAERIEIKRSR  307 (431)
T ss_pred             hcccccHHHHHHhCCCcccchhhhhhhhcccCcCCCHHHHHHhhcccchhhhhHHHHhhhHHHHHHHhhCCCccccccch
Confidence               01           00           11    222222221    1111      0111111 11111111001135


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018618          270 YAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  345 (353)
Q Consensus       270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~  345 (353)
                      ..+++++++|.+|.+   .++.+. -++|.+   |+|.++++||.++++|+.++.. ++|++..++++..-...-+-.++
T Consensus       308 e~a~~ii~ai~~~~~---~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~~-g~lP~~~~~l~~~~~~~e~l~ve  383 (431)
T PRK15076        308 EYASTIIEAIETGEP---SVIYGNVRNNGLIDNLPQGCCVEVPCLVDRNGIQPTKV-GDLPPQLAALNRTNINVQELTVE  383 (431)
T ss_pred             HHHHHHHHHHhcCCc---eEEEEECCCCCcCCCCCCCCEEEEeEEEcCCcceeeec-CCCCHHHHHHHHHHHHHHHHHHH
Confidence            789999999998876   244444 578875   8899999999999999999877 59999999988776555444444


Q ss_pred             Hhh
Q 018618          346 KGI  348 (353)
Q Consensus       346 ~~~  348 (353)
                      .++
T Consensus       384 Aa~  386 (431)
T PRK15076        384 AAL  386 (431)
T ss_pred             HHH
Confidence            443

>cd05197 GH4_glycoside_hydrolases Glycoside Hydrases Family 4

Probab=99.97  E-value=8.2e-29  Score=245.36  Aligned_cols=284  Identities=21%  Similarity=0.216  Sum_probs=191.0

Q ss_pred             CeEEEEcCCCCc-HHHHHHHHHhCC--C-CcEEEEEeCCC-cHH----HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcE
Q 018618           42 FKVAILGAAGGI-GQPLAMLMKINP--L-VSVLHLYDVVN-TPG----VTADISHMDTGAVVRGFLGQPQLENALTGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~v-G~~la~~l~~~~--~-~~el~L~D~~~-~~~----~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADi  112 (353)
                      |||+|||| |+. ...+...|+...  + .+||+|+|+++ ...    .+..+.+.. +..++.. .|+|+++|++||||
T Consensus         1 ~KI~iIGg-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~Rl~~v~~l~~~~~~~~-g~~~~v~-~ttD~~~Al~gADf   77 (425)
T cd05197           1 VKIAIIGG-GSSFTPELVSGLLKTPEELPISEVTLYDIDEERLDIILTIAKRYVEEV-GADIKFE-KTMDLEDAIIDADF   77 (425)
T ss_pred             CEEEEECC-chHhHHHHHHHHHcChhhCCCCEEEEEcCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCCE
Confidence            69999999 743 112233444433  3 58999999988 222    223333222 3445554 36899999999999


Q ss_pred             EEEcC---CC---------CCCCCC--------CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHH
Q 018618          113 VIIPA---GV---------PRKPGM--------TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  172 (353)
Q Consensus       113 VIi~a---g~---------~~~~g~--------~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~  172 (353)
                      ||.+.   |.         |.++|.        -......+|++++.++++.|+++||+||+|++|||++++|+++    
T Consensus        78 Vi~~irvGg~~~r~~De~Iplk~G~~gqeT~G~GG~~~alrni~ii~~i~~~i~~~~P~a~lin~TNP~di~t~a~----  153 (425)
T cd05197          78 VINQFRVGGLTYREKDEQIPLKYGVIGQETVGPGGTFSGLRQIPYVLDIARKXEKLSPDAWYLNFTNPAGEVTEAV----  153 (425)
T ss_pred             EEEeeecCChHHHHHHHhHHHHcCcccccccCcchhhhhhhhHHHHHHHHHHHHHhCCCcEEEecCChHHHHHHHH----
Confidence            99974   22         223332        2456678999999999999999999999999999999998765    


Q ss_pred             HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCCCccccccccCCC--------------------
Q 018618          173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAGVTILPLLSQVKP--------------------  231 (353)
Q Consensus       173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~~~~vp~~s~~~v--------------------  231 (353)
                      ++.  +|+.|+||+|.. +.|+++.+|+.+|+++++|+++++| ||+.     .||..++                    
T Consensus       154 ~~~--~p~~rviG~c~~-~~r~~~~ia~~lgv~~~~v~~~v~GlnHg~-----~~s~~~~~G~~l~p~l~~~~~~~~~~~  225 (425)
T cd05197         154 RRY--VPPEKAVGLCNV-PIGVMEIVAKLLGESEEKVDWQYAGLNHGI-----WLNRVRYNGGDVTPKLDEWVEEKSKDW  225 (425)
T ss_pred             HHh--CCCCcEEEECCC-HHHHHHHHHHHhCCCHHHeEEEEEeccCeE-----eeEeEEECCeecHHHHHHHHhccCccc
Confidence            455  378899999876 8899999999999999999999999 9974     2222211                    


Q ss_pred             ------------------------CC----C--CCh----H-------------H---H-HHHHHHHhcch--hhhhhhh
Q 018618          232 ------------------------PC----S--FTQ----E-------------E---T-EYLTNRIQNGG--TEVVEAK  258 (353)
Q Consensus       232 ------------------------~~----~--~~~----~-------------~---~-~el~~~v~~~~--~~i~~~~  258 (353)
                                              +.    .  ..+    +             .   + +++.+..+...  ....+. 
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~~~~~-  304 (425)
T cd05197         226 KTENPFVDQLSPAAIDFYRFYGVLPNPYLRYYLSWDKXRKLEADKEITWKTRADEVGKVEKELFEVYKFIKENPSVVEL-  304 (425)
T ss_pred             cccccccccccchHHHHHHhCCCcccCCccccCccchhhhhhHHhhcccCccHHHHHHHHHHHHHHHhhhhhcCChhhh-
Confidence                                    00    0  000    0             0   0 11212111100  000000 


Q ss_pred             ccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618          259 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  334 (353)
Q Consensus       259 ~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~  334 (353)
                      ..++...|  +..+++++++|.+|++.   ++.+. .++|.+   |++.++++||+++++|+.++.. ++|++..++++.
T Consensus       305 ~~r~~~~~--~e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEvp~~v~~~Gi~P~~v-g~lp~~~~~Li~  378 (425)
T cd05197         305 IKRGGRKY--SEAAIPLIRALLNDNGA---RFVVNTRNNGAIANIDDDVVVEVPCLVDKNGPHPIKV-GPLDRFVKGLLR  378 (425)
T ss_pred             hhcCCccc--HHHHHHHHHHHHcCCCe---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccc-CCCCHHHHHHHH
Confidence            01123334  57889999999998763   44444 578875   8899999999999999999876 599998888777


Q ss_pred             HHHHHHHHHHHHh
Q 018618          335 KAKKELAGSIQKG  347 (353)
Q Consensus       335 ~s~~~l~~~~~~~  347 (353)
                      .-...-+-.++.+
T Consensus       379 ~~~~~e~l~veAa  391 (425)
T cd05197         379 QRKMRERLALEAF  391 (425)
T ss_pred             HHHHHHHHHHHHH
Confidence            6554444444444

Glycoside hydrolases cleave glycosidic bonds to release smaller sugars from oligo- or polysaccharides. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by GH4 glycoside hydrolases. Other organisms (such as archaea and Thermotoga maritima) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. GH4 family members include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. They require two cofactors, NAD+ and a divalent metal (Mn2+, Ni2+, Mg2+), for activity. Some also require reducing conditions. GH4 glycoside hydrolases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families in

>cd05296 GH4_P_beta_glucosidase Glycoside Hydrolases Family 4; Phospho-beta-glucosidase

Probab=99.97  E-value=1.6e-28  Score=242.98  Aligned_cols=286  Identities=19%  Similarity=0.216  Sum_probs=192.2

Q ss_pred             CeEEEEcCCCCcHH-HHHHHHHhC-C-C-CcEEEEEeCC-C--cH---HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCc
Q 018618           42 FKVAILGAAGGIGQ-PLAMLMKIN-P-L-VSVLHLYDVV-N--TP---GVTADISHMDTGAVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~-~la~~l~~~-~-~-~~el~L~D~~-~--~~---~~~~dl~~~~~~~~v~~~~~t~d~~~al~~AD  111 (353)
                      |||+|||| |++-. .+...|+.. . + .+||+|+|++ +  +.   ..+.++.... .+.+++. .|+|+++|++|||
T Consensus         1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~Did~~~rl~~v~~~~~~~~~~~-~~~~~v~-~t~d~~~al~gad   77 (419)
T cd05296           1 MKLTIIGG-GSSYTPELIEGLIRRYEELPVTELVLVDIDEEEKLEIVGALAKRMVKKA-GLPIKVH-LTTDRREALEGAD   77 (419)
T ss_pred             CEEEEECC-chHhHHHHHHHHHhccccCCCCEEEEecCChHHHHHHHHHHHHHHHHhh-CCCeEEE-EeCCHHHHhCCCC
Confidence            69999999 75411 223344442 2 3 5899999999 5  21   1122232222 2344543 3689999999999


Q ss_pred             EEEEcCCCCCCCCCCHH--------------------HHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHH
Q 018618          112 LVIIPAGVPRKPGMTRD--------------------DLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  171 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~--------------------~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~  171 (353)
                      +||++.+.+..+++++.                    ....+|+++++++++.|+++||+||+|++|||++++|+.+   
T Consensus        78 fVi~~~~vg~~~~r~~de~i~~~~Gi~gqET~G~GG~~~a~rni~ii~~i~~~i~~~~Pda~lin~TNP~~ivt~a~---  154 (419)
T cd05296          78 FVFTQIRVGGLEARALDERIPLKHGVIGQETTGAGGFAKALRTIPVILDIAEDVEELAPDAWLINFTNPAGIVTEAV---  154 (419)
T ss_pred             EEEEEEeeCCcchhhhhhhhHHHcCCccccCCCcchHHHhhhhHHHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH---
Confidence            99999776554444333                    3478999999999999999999999999999999997654   


Q ss_pred             HHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------Cccccccc--------------
Q 018618          172 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLS--------------  227 (353)
Q Consensus       172 ~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~---------~~~vp~~s--------------  227 (353)
                       ++.+   +.|+||+|..+ .|+++.+|+.+|+++++|+++++| ||..         ++.+|.+-              
T Consensus       155 -~k~~---~~rviGlc~~~-~r~~~~ia~~lg~~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~~~~~~~~~  229 (419)
T cd05296         155 -LRHT---GDRVIGLCNVP-IGLQRRIAELLGVDPEDVFIDYAGLNHLGWLRRVLLDGEDVLPELLEDLAALLSFEEGLL  229 (419)
T ss_pred             -HHhc---cCCEEeeCCcH-HHHHHHHHHHhCCCHHHceEEEEecccceeeeeeeECCcccHHHHHHHhhhccccccccc
Confidence             5554   68999999775 799999999999999999999999 7765         24455211              


Q ss_pred             --cC------CCCC-----C-CChHHH------------------HHHHHHHhcch----hhhhhhhccCCcccchHHHH
Q 018618          228 --QV------KPPC-----S-FTQEET------------------EYLTNRIQNGG----TEVVEAKAGAGSATLSMAYA  271 (353)
Q Consensus       228 --~~------~v~~-----~-~~~~~~------------------~el~~~v~~~~----~~i~~~~~gkg~~~~s~A~a  271 (353)
                        ..      .++.     . +.++.+                  .++.+..+...    .+-+.   .++...|  +..
T Consensus       230 ~~~~~~~~~g~~p~~Yl~yy~~~~~~~~~~~~~~~~r~e~~~~~~~~l~~~~~~~~~~~~~~~~~---~r~g~~y--~e~  304 (419)
T cd05296         230 FGPELLRALGALPNEYLRYYYQTDEALEEILEAAGTRGEVVKEVEKELFELYKDPNLDEKPKELE---KRGGAGY--SEA  304 (419)
T ss_pred             hHHHHHHhcCCcccchHHHHCCcHHHHHHhhhhccchHHHHHHHHHHHHHHHhccccccChHhhH---hhcCcch--HHH
Confidence              00      0011     0 111111                  12212222110    11111   1233334  578


Q ss_pred             HHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018618          272 AVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  347 (353)
Q Consensus       272 ~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~  347 (353)
                      +++++++|.++++.   ++.+. -++|.+   |++.++++||.++++|+.++.. ++|++..++++..-...=+-.++.+
T Consensus       305 a~~ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEvp~~v~~~G~~P~~v-g~lP~~~~~l~~~~~~~e~l~veAa  380 (419)
T cd05296         305 ALALISAIYNDKGD---IHVVNVRNNGAIPGLPDDAVVEVPCVVDADGAHPLPV-GPLPPAILGLIQQVKAYERLTIEAA  380 (419)
T ss_pred             HHHHHHHHhcCCCc---EEEEECCCCCCCCCCCCCCEEEEeEEEcCCCceeccC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            89999999988763   44344 578875   8899999999999999999876 6999998888766544433334443

Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein

>cd05298 GH4_GlvA_pagL_like Glycoside Hydrolases Family 4; GlvA- and pagL-like glycosidases

Probab=99.96  E-value=7.3e-27  Score=231.87  Aligned_cols=291  Identities=19%  Similarity=0.233  Sum_probs=191.8

Q ss_pred             CeEEEEcCCCCc-HHHHHHHHHhC--CC-CcEEEEEeCCC-cHH----HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcE
Q 018618           42 FKVAILGAAGGI-GQPLAMLMKIN--PL-VSVLHLYDVVN-TPG----VTADISHMDTGAVVRGFLGQPQLENALTGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~v-G~~la~~l~~~--~~-~~el~L~D~~~-~~~----~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADi  112 (353)
                      |||+|||| |++ +..+...|++.  .+ .++|+|+|+++ ...    .+..+.+.. +..+++. .|+|+++|++||||
T Consensus         1 ~KI~iIGa-GS~~tp~li~~l~~~~~~l~~~ei~L~DId~~rl~~v~~l~~~~~~~~-g~~~~v~-~Ttdr~eAl~gADf   77 (437)
T cd05298           1 FKIVIAGG-GSTYTPGIVKSLLDRKEDFPLRELVLYDIDAERQEKVAEAVKILFKEN-YPEIKFV-YTTDPEEAFTDADF   77 (437)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHhCcccCCCCEEEEECCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EECCHHHHhCCCCE
Confidence            79999999 743 11223344444  24 48999999998 222    223332222 2345554 36899999999999


Q ss_pred             EEEcC---CC---------CCCCCC--------CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHH
Q 018618          113 VIIPA---GV---------PRKPGM--------TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  172 (353)
Q Consensus       113 VIi~a---g~---------~~~~g~--------~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~  172 (353)
                      ||.+.   |.         |.++|.        -......+|++++.++++.|+++||+||+|++|||++++|+.+    
T Consensus        78 Vi~~irvGg~~~r~~De~Ip~kyGi~gqET~G~GG~~~alRtip~~~~i~~~i~~~~pda~lin~tNP~~~vt~~~----  153 (437)
T cd05298          78 VFAQIRVGGYAMREQDEKIPLKHGVVGQETCGPGGFAYGLRSIGPMIELIDDIEKYSPDAWILNYSNPAAIVAEAL----  153 (437)
T ss_pred             EEEEeeeCCchHHHHHHhHHHHcCcceecCccHHHHHHHHhhHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHH----
Confidence            99974   22         223332        2455778999999999999999999999999999999998654    


Q ss_pred             HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCC----------Ccccccccc-------------
Q 018618          173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG----------VTILPLLSQ-------------  228 (353)
Q Consensus       173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~----------~~~vp~~s~-------------  228 (353)
                      ++.  +|+.|+||+|+.... ++..+|+.+|+++++++..+.| ||..          ++.+|.+..             
T Consensus       154 ~~~--~~~~kviGlC~~~~~-~~~~la~~lg~~~~~v~~~~~GlNH~~w~~~~~~~~G~D~~p~l~e~~~~~~~~~~~~~  230 (437)
T cd05298         154 RRL--FPNARILNICDMPIA-IMDSMAAILGLDRKDLEPDYFGLNHFGWFTKIYDKQGEDLLPKLREHVKENGYLPPDSD  230 (437)
T ss_pred             HHH--CCCCCEEEECCcHHH-HHHHHHHHhCCCHHHceEEEEeecchhhhhheEECCCCchHHHHHHHHhccCCCccccc
Confidence            444  778999999987754 7899999999999999999988 3332          134443210             


Q ss_pred             -C---C-------------------CCCC-----C-ChHHHHH--------------HHHHHhcchhhhhhhhccC--Cc
Q 018618          229 -V---K-------------------PPCS-----F-TQEETEY--------------LTNRIQNGGTEVVEAKAGA--GS  263 (353)
Q Consensus       229 -~---~-------------------v~~~-----~-~~~~~~e--------------l~~~v~~~~~~i~~~~~gk--g~  263 (353)
                       .   .                   +++.     + .++..++              ..++..+...++..  .++  ..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~g~~~p~~y~~yy~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~~~~~~~--~~~~~~~  308 (437)
T cd05298         231 EEHRDPSWNDTFANAKDMMADFPDYLPNTYLQYYLYPDYMVEHSNPNYTRANEVMDGREKRVFEECRKIIE--TGTAEGS  308 (437)
T ss_pred             ccccccCchHHHHHHhhHHHhCCCcCCCchhhHhCChHHHHHHhccccccHHHHHHHHHHHHHHHHhhhhh--cCChhhh
Confidence             0   0                   1110     0 1110011              11111000000000  000  00


Q ss_pred             ccc--hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 018618          264 ATL--SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK  337 (353)
Q Consensus       264 ~~~--s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~  337 (353)
                      ...  ..|.++++++++|++|.+   .+++++ .++|.|   ++|+++|+||+||++|+.++.- ++|++...+++..-.
T Consensus       309 ~~~~~~ya~~a~~ii~aI~~d~~---~~~~vnv~n~G~i~nL~~d~~vevP~~v~~~Gi~pi~v-g~lP~~~~~l~~~~~  384 (437)
T cd05298         309 TFHVDVHGEYIVDLAASIAYNTK---ERFLVIVENNGAIPNLPDDAMVEVPAYIGSNGPEPLVV-GKIPTFYKGLMEQQV  384 (437)
T ss_pred             hhhccchHHHHHHHHHHHHcCCC---eEEEEEeecCCccCCCCCCcEEEEEEEEeCCCceeccc-CCCCHHHHHHHHHHH
Confidence            010  136789999999999865   477776 678887   6799999999999999999877 699999988877655


Q ss_pred             HHHHHHHHHhh
Q 018618          338 KELAGSIQKGI  348 (353)
Q Consensus       338 ~~l~~~~~~~~  348 (353)
                      ..-+-.++.++
T Consensus       385 ~~e~l~veAa~  395 (437)
T cd05298         385 AYEKLLVEAYL  395 (437)
T ss_pred             HHHHHHHHHHH
Confidence            55444444443

Bacillus subtilis GlvA and Clostridium acetobutylicum pagL are 6-phospho-alpha-glucosidase, catalyzing the hydrolysis of alpha-glucopyranoside bonds to release glucose from oligosaccharides. The substrate specificities of other members of this subgroup are unknown. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP_PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases, which include 6-phospho-beta-glucosidases, 6-phospho-alpha-glucosidases, alpha-glucosidases/alpha-glucuronidases (only from Thermotoga), and alpha-galactosidases. Members of this subfamily are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductas

>cd05297 GH4_alpha_glucosidase_galactosidase Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases

Probab=99.94  E-value=2.7e-25  Score=221.12  Aligned_cols=289  Identities=17%  Similarity=0.143  Sum_probs=195.1

Q ss_pred             CeEEEEcCCCCcHHHHHH--HHHhC-CC-CcEEEEEeCCC--cHHHHHHHhcCC--CCCeEEEEeCCCchhhhhCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAM--LMKIN-PL-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~--~l~~~-~~-~~el~L~D~~~--~~~~~~dl~~~~--~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      +||+|||| |++|++.+.  .++.. .. ..+|+|+|+++  ++....++.+..  .....+.. .++|+++|++|||+|
T Consensus         1 ~KIaIIGa-Gs~G~a~a~~~~i~~~~~~~g~eV~L~Did~e~l~~~~~~~~~~~~~~~~~~~I~-~ttD~~eal~~AD~V   78 (423)
T cd05297           1 IKIAFIGA-GSVVFTKNLVGDLLKTPELSGSTIALMDIDEERLETVEILAKKIVEELGAPLKIE-ATTDRREALDGADFV   78 (423)
T ss_pred             CeEEEECC-ChHHhHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHhcCCCeEEE-EeCCHHHHhcCCCEE
Confidence            59999999 999999877  45433 33 24999999987  444444443321  11223332 357888999999999


Q ss_pred             EEcCCCCCCCCCCH----------------------HHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHH
Q 018618          114 IIPAGVPRKPGMTR----------------------DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  171 (353)
Q Consensus       114 Ii~ag~~~~~g~~r----------------------~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~  171 (353)
                      |++++....++.++                      .....+|++++.++++.+.++||++|++++|||++++|+++   
T Consensus        79 i~ai~~~~~~~~~~de~i~~K~g~~~~~~~t~g~ggi~~~~~s~~~i~~ia~~i~~~~p~a~~i~~tNPv~i~t~~~---  155 (423)
T cd05297          79 INTIQVGGHEYTETDFEIPEKYGYYQTVGDTSGPGGIFRALRTIPVLLDIARDIEELCPDAWLLNYANPMAELTWAL---  155 (423)
T ss_pred             EEeeEecCccchhhhhhhHHHcCeeeeccCCCcHHHHHHHHhhHHHHHHHHHHHHHHCCCCEEEEcCChHHHHHHHH---
Confidence            99987544443333                      45678999999999999999999999999999999998654   


Q ss_pred             HHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------Ccccccccc-----------CC
Q 018618          172 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILPLLSQ-----------VK  230 (353)
Q Consensus       172 ~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~---------~~~vp~~s~-----------~~  230 (353)
                       ++.++   .|++|+|+. +.++++.+|+.+|+++++|+++++| ||..         ++.+|.+..           ..
T Consensus       156 -~k~~~---~rviG~c~~-~~~~~~~~a~~l~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~~~  230 (423)
T cd05297         156 -NRYTP---IKTVGLCHG-VQGTAEQLAKLLGEPPEEVDYQVAGINHMAWLLKFEYNGEDLYPLLDEWIEEGSEEWDQLS  230 (423)
T ss_pred             -HHhCC---CCEEEECCc-HHHHHHHHHHHhCCCHHHeEEEEEeeccHhhhhhheECCcchHHHHHHHHhccCccchhcc
Confidence             56554   799999865 6789999999999999999999999 4433         234443111           11


Q ss_pred             -CC-----------C-------C------CChHHHHH------------------HHHHHhcchhhhhhh--hccCCccc
Q 018618          231 -PP-----------C-------S------FTQEETEY------------------LTNRIQNGGTEVVEA--KAGAGSAT  265 (353)
Q Consensus       231 -v~-----------~-------~------~~~~~~~e------------------l~~~v~~~~~~i~~~--~~gkg~~~  265 (353)
                       ++           .       .      ..++....                  +........  ..+.  ....+...
T Consensus       231 ~~~~~~~~~~g~~p~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  308 (423)
T cd05297         231 PVRFDMYRRYGLFPTESSEHLSEYVPHYRKETKKIWYGEFNEDEYGGRDEEQGWEWYEERLKLI--LAEIDKEELDPVKR  308 (423)
T ss_pred             cchHHHHHHcCCcccCcchhhhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHhhhhhc--cchhcchhcccccc
Confidence             10           0       0      01011111                  111111000  0000  00011122


Q ss_pred             chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618          266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  341 (353)
Q Consensus       266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~  341 (353)
                      +  +..+++++++|.+|++   .++.+. .++|.+   |++.++++||.++++|+.++.. ++|++..++++..-...-+
T Consensus       309 ~--~e~a~~ii~ai~~~~~---~~~~vnv~N~G~I~~Lp~d~vVEvp~~v~~~G~~p~~~-g~lp~~~~~l~~~~~~~e~  382 (423)
T cd05297         309 S--GEYASPIIEALVTGKP---RRINGNVPNNGLIPNLPDDVVVEVPALVDRNGIHPEKI-GPLPPQLAALIRPRINVQE  382 (423)
T ss_pred             c--hHHHHHHHHHHhcCCc---eEEEEECCCCCCCCCCCCCcEEEEeeEEcCCCceeccc-CCCCHHHHHHHHHHHHHHH
Confidence            2  4678999999998765   344444 578875   8899999999999999999877 6999999888877655544


Q ss_pred             HHHHHhh
Q 018618          342 GSIQKGI  348 (353)
Q Consensus       342 ~~~~~~~  348 (353)
                      -.++.++
T Consensus       383 l~veA~~  389 (423)
T cd05297         383 LAVEAAL  389 (423)
T ss_pred             HHHHHHH
Confidence            4444443

linked to 3D####ucture

>COG1486 CelF Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases [Carbohydrate transport and metabolism]

Probab=99.94  E-value=4.1e-25  Score=215.39  Aligned_cols=293  Identities=21%  Similarity=0.235  Sum_probs=192.2

Q ss_pred             CCCeEEEEcCCCCcHHHHH--HHHHhCC-C-CcEEEEEeCCC-cHHH----HHHHhcCCCCCeEEEEeCCCchhhhhCCC
Q 018618           40 AGFKVAILGAAGGIGQPLA--MLMKINP-L-VSVLHLYDVVN-TPGV----TADISHMDTGAVVRGFLGQPQLENALTGM  110 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la--~~l~~~~-~-~~el~L~D~~~-~~~~----~~dl~~~~~~~~v~~~~~t~d~~~al~~A  110 (353)
                      +.+||+|||| |+++..-.  -.|.+.+ + ..||+|+|+++ ....    +..+.+.. ++.+++. .++|+++||+||
T Consensus         2 ~~~KI~iIGg-GSt~tp~~v~g~l~~~e~l~~~el~L~Did~~r~~~i~~~~~~~v~~~-g~~~kv~-~ttd~~eAl~gA   78 (442)
T COG1486           2 KKFKIVIIGG-GSTYTPKLLLGDLARTEELPVRELALYDIDEERLKIIAILAKKLVEEA-GAPVKVE-ATTDRREALEGA   78 (442)
T ss_pred             CcceEEEECC-CccccHHHHHHHHhcCccCCcceEEEEeCCHHHHHHHHHHHHHHHHhh-CCCeEEE-EecCHHHHhcCC
Confidence            3569999999 86655542  2344443 3 57999999988 2222    22333222 2335554 357999999999


Q ss_pred             cEEEEcC---C---------CCCCCCCC--------HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHH
Q 018618          111 DLVIIPA---G---------VPRKPGMT--------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  170 (353)
Q Consensus       111 DiVIi~a---g---------~~~~~g~~--------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~  170 (353)
                      |||+.+.   |         .|.++|..        ......++++++.++++.|+++||+||++++|||+.++|+.+  
T Consensus        79 dfVi~~~rvG~l~~r~~De~IplkyG~~gqET~G~GGi~~glRtIpvildi~~~m~~~~P~Aw~lNytNP~~~vTeAv--  156 (442)
T COG1486          79 DFVITQIRVGGLEAREKDERIPLKHGLYGQETNGPGGIFYGLRTIPVILDIAKDMEKVCPNAWMLNYTNPAAIVTEAV--  156 (442)
T ss_pred             CEEEEEEeeCCcccchhhhccchhhCccccccccccHHHhhcccchHHHHHHHHHHHhCCCceEEeccChHHHHHHHH--
Confidence            9999974   2         23444422        334567999999999999999999999999999999998654  


Q ss_pred             HHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCC-CCCcceEEe-ecCC---------Ccccccccc-----------
Q 018618          171 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVG-GHAG---------VTILPLLSQ-----------  228 (353)
Q Consensus       171 ~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~-~~v~~~viG-~hg~---------~~~vp~~s~-----------  228 (353)
                        .+.  +|..|++|+|+... -....+|+.||+++ ++++..+.| ||..         ++.+|.+..           
T Consensus       157 --~r~--~~~~K~VGlCh~~~-g~~~~lAe~L~~~~~~~l~~~~aGlNH~~w~~~~~~~G~d~~p~l~~~~~~~~~~~~~  231 (442)
T COG1486         157 --RRL--YPKIKIVGLCHGPI-GIAMELAEVLGLEPREDLRYRVAGLNHMVWILRVRDDGEDLYPELLEALEEGGSPSEP  231 (442)
T ss_pred             --HHh--CCCCcEEeeCCchH-HHHHHHHHHhCCCchhceeEEEeechhhhhhhHhhhcCccchHHHHHHHhccccCCcc
Confidence              443  45459999998765 37899999999975 999999999 4433         122222111           


Q ss_pred             --------CC--------C---CC------C-----------------CChHHHHHHHHH----Hhc-chhhhhhhhccC
Q 018618          229 --------VK--------P---PC------S-----------------FTQEETEYLTNR----IQN-GGTEVVEAKAGA  261 (353)
Q Consensus       229 --------~~--------v---~~------~-----------------~~~~~~~el~~~----v~~-~~~~i~~~~~gk  261 (353)
                              ..        +   ++      .                 ...+++.+..+.    .++ .-.+..+....+
T Consensus       232 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ra~ev~~re~~~~~~~~~~~~~~~p~~~~~~  311 (442)
T COG1486         232 ENKNIQSPVWIDMFLKYGYPVLPSSYHRYYYYPYDMKEKKPDEIEKFGTRANEVMKREKELFELYKKPELKEKPEELEKR  311 (442)
T ss_pred             ccccccCcchHHHHHHhCcCcccCcchhhheehHhhhhccchhhhhcCCCHHHHHHHHHHHHHHHhhhhhhcCchhhhhc
Confidence                    00        0   00      0                 011111111111    111 000000000112


Q ss_pred             Ccc--cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018618          262 GSA--TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  335 (353)
Q Consensus       262 g~~--~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~  335 (353)
                      +.+  .+  +..++++++||++|++.   ++.+. .++|.+   |+|.++++||.+|++|+.++.. ++|++.-++++..
T Consensus       312 ~~~~~~~--~e~a~~ii~Ai~~~~~~---~~~vNv~N~G~I~nlp~D~vVEvpc~Vd~~Gi~P~~~-g~lP~~~~~l~~~  385 (442)
T COG1486         312 IGAGKYS--SEYASNIINAIENNKPS---RIYVNVRNNGAITNLPDDAVVEVPCLVDRNGIHPLAV-GDLPEFVKGLMHT  385 (442)
T ss_pred             CCccccc--HHHHHHHHHHHhcCCce---EEEEEcCCCccccCCCCCeEEEeeEEecCCCCccccc-CCCCHHHHHHHHH
Confidence            222  34  46889999999999763   44444 578885   8899999999999999999777 6999999998888


Q ss_pred             HHHHHHHHHHHhh
Q 018618          336 AKKELAGSIQKGI  348 (353)
Q Consensus       336 s~~~l~~~~~~~~  348 (353)
                      ....-+-.++.++
T Consensus       386 ~i~~e~l~veA~~  398 (442)
T COG1486         386 NINVEELTVEAAL  398 (442)
T ss_pred             HHHHHHHHHHHHH
Confidence            7766665555443

>PF02056 Glyco_hydro_4: Family 4 glycosyl hydrolase; InterPro: IPR001088 O-Glycosyl hydrolases 3

Probab=99.82  E-value=3e-19  Score=157.15  Aligned_cols=152  Identities=22%  Similarity=0.247  Sum_probs=105.7

Q ss_pred             eEEEEcCCCCcHHHHH--HHHHhCC-C-CcEEEEEeCCC-c----HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618           43 KVAILGAAGGIGQPLA--MLMKINP-L-VSVLHLYDVVN-T----PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        43 KI~IiGa~G~vG~~la--~~l~~~~-~-~~el~L~D~~~-~----~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      ||+|||| |++-....  ..+...+ + .+||+|+|+++ .    ...+..+.... ...++.. .|+|+++|++|||+|
T Consensus         1 KI~iIGa-GS~~~~~~l~~~l~~~~~l~~~ei~L~Did~~RL~~~~~~~~~~~~~~-~~~~~v~-~ttd~~eAl~gADfV   77 (183)
T PF02056_consen    1 KITIIGA-GSTYFPLLLLGDLLRTEELSGSEIVLMDIDEERLEIVERLARRMVEEA-GADLKVE-ATTDRREALEGADFV   77 (183)
T ss_dssp             EEEEETT-TSCCHHHHHHHHHHCTTTSTEEEEEEE-SCHHHHHHHHHHHHHHHHHC-TTSSEEE-EESSHHHHHTTESEE
T ss_pred             CEEEECC-chHhhHHHHHHHHhcCccCCCcEEEEEcCCHHHHHHHHHHHHHHHHhc-CCCeEEE-EeCCHHHHhCCCCEE
Confidence            8999999 87755543  3444443 3 47999999998 1    12233333222 2334433 358999999999999


Q ss_pred             EEcCC------------CCCCCCCC----------HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHH
Q 018618          114 IIPAG------------VPRKPGMT----------RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  171 (353)
Q Consensus       114 Ii~ag------------~~~~~g~~----------r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~  171 (353)
                      |++..            .|.+.|..          ......++++.+.++++.|+++||+||+|++|||+..+|..+   
T Consensus        78 i~~irvGg~~~r~~De~Ip~k~Gi~~~~~eT~G~GG~~~alRtipv~~~ia~~i~~~~PdAw~iNytNP~~~vt~a~---  154 (183)
T PF02056_consen   78 INQIRVGGLEAREIDEEIPLKYGIVGTIQETVGPGGFFRALRTIPVMLDIARDIEELCPDAWLINYTNPMGIVTEAL---  154 (183)
T ss_dssp             EE---TTHHHHHHHHHHTGGCCTTT-BTTSSSTHHHHHHHHHHHHHHHHHHHHHHHHTTTSEEEE-SSSHHHHHHHH---
T ss_pred             EEEeeecchHHHHHHHHHHHHhCCccccccccCccHHHHHHhhHHHHHHHHHHHHHhCCCcEEEeccChHHHHHHHH---
Confidence            99853            24455432          456678999999999999999999999999999999998654   


Q ss_pred             HHHhCCCCCCceEeechhhHHHHHHHHHHHhCC
Q 018618          172 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGL  204 (353)
Q Consensus       172 ~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v  204 (353)
                       .+.  +|..|++|+|+... -+...+|+.||+
T Consensus       155 -~r~--~~~~k~vGlCh~~~-~~~~~la~~L~~  183 (183)
T PF02056_consen  155 -SRY--TPKIKVVGLCHGPQ-GTRRQLAKLLGM  183 (183)
T ss_dssp             -HHH--STTSEEEEE-SHHH-HHHHHHHHHHT-
T ss_pred             -HHh--CCCCCEEEECCCHH-HHHHHHHHHhCc
Confidence             443  45579999998775 478999999875

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 4 GH4 from CAZY comprises enzymes with several known activities; 6-phospho-beta-glucosidase (3.2.1.86 from EC); 6-phospho-alpha-glucosidase (3.2.1.122 from EC); alpha-galactosidase (3.2.1.22 from EC). 6-phospho-alpha-glucosidase requires both NAD(H) and divalent metal (Mn2+, Fe2+, Co2+, or Ni2+) for activity [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1U8X_X 1S6Y_A 3FEF_B 1VJT_A 1UP4_A 1UP6_C 1UP7_E 1OBB_A.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=98.91  E-value=3.2e-08  Score=95.86  Aligned_cols=115  Identities=17%  Similarity=0.240  Sum_probs=83.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHH-------------HHH-hcCCCCCeEEEEeCCCchhhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-------------ADI-SHMDTGAVVRGFLGQPQLENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~-------------~dl-~~~~~~~~v~~~~~t~d~~~al  107 (353)
                      |||+|+|. |+||...+.+|++.|+  +|+++|+++.+-..             .+| .+.....+++.   |+|+++|+
T Consensus         1 MkI~viGt-GYVGLv~g~~lA~~GH--eVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~f---Ttd~~~a~   74 (414)
T COG1004           1 MKITVIGT-GYVGLVTGACLAELGH--EVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRF---TTDYEEAV   74 (414)
T ss_pred             CceEEECC-chHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEE---EcCHHHHH
Confidence            79999998 9999999999999998  99999998722111             112 11111223554   57999999


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-cEEEE-ecCCCCchhHHH
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNL-ISNPVNSTVPIA  168 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv-~tNPv~~~t~~~  168 (353)
                      +++|+++|+.|.|.++.-      ..++..+...++.|.++.+. ++|++ .|-|+.....+-
T Consensus        75 ~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KSTVPvGt~~~v~  131 (414)
T COG1004          75 KDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKSTVPVGTTEEVR  131 (414)
T ss_pred             hcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcCCCCCCchHHHH
Confidence            999999999999877521      33466788888888888765 43333 368988776553

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=98.81  E-value=1.2e-08  Score=90.29  Aligned_cols=118  Identities=25%  Similarity=0.376  Sum_probs=77.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-H--HHHHH----H-hcCCC--------CCeEEEEeCCCchh
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-P--GVTAD----I-SHMDT--------GAVVRGFLGQPQLE  104 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~--~~~~d----l-~~~~~--------~~~v~~~~~t~d~~  104 (353)
                      ||+|+|| |.+|..+|..++..|+  +|+|+|.++  + .  ....+    + .....        ...++.   ++|++
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~dl~   74 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGY--EVTLYDRSPEALERARKRIERLLDRLVRKGRLSQEEADAALARISF---TTDLE   74 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTS--EEEEE-SSHHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHTEEE---ESSGG
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCC--cEEEEECChHHHHhhhhHHHHHHhhhhhhccchhhhhhhhhhhccc---ccCHH
Confidence            7999999 9999999999999998  999999987  1 1  11111    1 11111        124554   36886


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          105 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       105 ~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      ++. +||+||.+.              .+++++.+++...+++++ |+++  +.||...+-..   ++. .... .|+|+
T Consensus        75 ~~~-~adlViEai--------------~E~l~~K~~~~~~l~~~~~~~~i--lasnTSsl~i~---~la-~~~~-~p~R~  132 (180)
T PF02737_consen   75 EAV-DADLVIEAI--------------PEDLELKQELFAELDEICPPDTI--LASNTSSLSIS---ELA-AALS-RPERF  132 (180)
T ss_dssp             GGC-TESEEEE-S---------------SSHHHHHHHHHHHHCCS-TTSE--EEE--SSS-HH---HHH-TTSS-TGGGE
T ss_pred             HHh-hhheehhhc--------------cccHHHHHHHHHHHHHHhCCCce--EEecCCCCCHH---HHH-hccC-cCceE
Confidence            655 999999985              677899999999999999 6785  48887765532   222 2222 45678


Q ss_pred             Eeech
Q 018618          184 LGVTM  188 (353)
Q Consensus       184 iG~t~  188 (353)
                      +|+-.
T Consensus       133 ig~Hf  137 (180)
T PF02737_consen  133 IGMHF  137 (180)
T ss_dssp             EEEEE
T ss_pred             EEEec
Confidence            88743

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>COG1250 FadB 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]

Probab=98.76  E-value=5.4e-08  Score=92.52  Aligned_cols=122  Identities=22%  Similarity=0.302  Sum_probs=86.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--H----HHHhcCC--C----CCeEEEEeCCCchhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--T----ADISHMD--T----GAVVRGFLGQPQLEN  105 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~----~dl~~~~--~----~~~v~~~~~t~d~~~  105 (353)
                      .+||+|||| |.+|+.+|..++..|+  +|+|+|+++  + ++.  .    ..+....  .    ...+..+..++|+ .
T Consensus         3 i~kv~ViGa-G~MG~gIA~~~A~~G~--~V~l~D~~~~~~~~~~~~i~~~l~k~~~~g~l~~~~~~~~l~~i~~~~~~-~   78 (307)
T COG1250           3 IKKVAVIGA-GVMGAGIAAVFALAGY--DVVLKDISPEALERALAYIEKNLEKLVEKGKLTEEEADAALARITPTTDL-A   78 (307)
T ss_pred             ccEEEEEcc-cchhHHHHHHHhhcCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHhhccccCch-h
Confidence            369999999 9999999999999777  999999986  1 111  1    1111110  0    1112223335675 5


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceE
Q 018618          106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL  184 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kvi  184 (353)
                      ++++||+||..+              .+|.++.+++.+++.+++ |++++  .||.+.+...-++    ..+ -.|+|++
T Consensus        79 ~l~~~DlVIEAv--------------~E~levK~~vf~~l~~~~~~~aIl--ASNTSsl~it~ia----~~~-~rper~i  137 (307)
T COG1250          79 ALKDADLVIEAV--------------VEDLELKKQVFAELEALAKPDAIL--ASNTSSLSITELA----EAL-KRPERFI  137 (307)
T ss_pred             HhccCCEEEEec--------------cccHHHHHHHHHHHHhhcCCCcEE--eeccCCCCHHHHH----HHh-CCchhEE
Confidence            899999999985              789999999999999999 68844  9999986654332    222 3467888


Q ss_pred             eec
Q 018618          185 GVT  187 (353)
Q Consensus       185 G~t  187 (353)
                      |+.
T Consensus       138 G~H  140 (307)
T COG1250         138 GLH  140 (307)
T ss_pred             EEe
Confidence            873

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=98.70  E-value=8.7e-08  Score=101.57  Aligned_cols=138  Identities=18%  Similarity=0.211  Sum_probs=95.8

Q ss_pred             cccchhhhhhhhcccCC------CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c--HHH--HHH----H-
Q 018618           22 NLQNSCLRQAKCRAKGG------AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--TAD----I-   85 (353)
Q Consensus        22 ~~~~~~~~~~~~~~~~~------~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~--~~~--~~d----l-   85 (353)
                      +|+-.||-++.+++...      .+..||+|||| |.+|..+|..++..|+  +|+|+|.++ .  ++.  +.+    + 
T Consensus       288 ~l~~~ff~~r~~~~~~~~~~~~~~~i~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~  364 (714)
T TIGR02437       288 ALIGLFLNDQYVKGKAKKADKIAKDVKQAAVLGA-GIMGGGIAYQSASKGT--PIVMKDINQHSLDLGLTEAAKLLNKQV  364 (714)
T ss_pred             HHHHHHhhhHhhcCCCCCCCCCccccceEEEECC-chHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHH
Confidence            45556777666655432      23468999999 9999999999999998  999999987 1  211  111    1 


Q ss_pred             hcCCC--------CCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEE
Q 018618           86 SHMDT--------GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL  156 (353)
Q Consensus        86 ~~~~~--------~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv  156 (353)
                      .+...        ...++.   ++|+ +++++||+||.++              .+++++.+++..++.+++ |+++  +
T Consensus       365 ~~g~~~~~~~~~~~~~i~~---~~~~-~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~i--l  424 (714)
T TIGR02437       365 ERGRITPAKMAGVLNGITP---TLSY-AGFDNVDIVVEAV--------------VENPKVKAAVLAEVEQHVREDAI--L  424 (714)
T ss_pred             HcCCCChhhHHHHHhCeEE---eCCH-HHhcCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcE--E
Confidence            11110        123443   4676 6799999999985              778999999999999999 5674  4


Q ss_pred             ecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618          157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       157 ~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      .||.+.+-..-++    .... .|+|++|+.
T Consensus       425 asnTS~l~i~~ia----~~~~-~p~r~ig~H  450 (714)
T TIGR02437       425 ASNTSTISISLLA----KALK-RPENFCGMH  450 (714)
T ss_pred             EECCCCCCHHHHH----hhcC-CcccEEEEe
Confidence            9999886543322    2232 467888874

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=98.68  E-value=1.5e-07  Score=100.06  Aligned_cols=137  Identities=18%  Similarity=0.247  Sum_probs=95.6

Q ss_pred             cccchhhhhhhhcccC-C---CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHH--HHH-H----hc
Q 018618           22 NLQNSCLRQAKCRAKG-G---AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV--TAD-I----SH   87 (353)
Q Consensus        22 ~~~~~~~~~~~~~~~~-~---~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~--~~d-l----~~   87 (353)
                      +|+-.||-++.+++.. .   .+..||+|||| |.+|+.+|..++..|+  +|+|+|+++   .++.  ..+ +    ..
T Consensus       312 al~~~f~~~~~~~~~~~~~~~~~i~~v~ViGa-G~MG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~i~~~l~~~~~~  388 (737)
T TIGR02441       312 ALIGLFHGQTDCKKNKFGKPQRPVKTLAVLGA-GLMGAGIAQVSVDKGL--KTVLKDATPAGLDRGQQQVFKGLNKKVKR  388 (737)
T ss_pred             HHHHHHHHHHHccCCCCCCCCCcccEEEEECC-CHhHHHHHHHHHhCCC--cEEEecCCHHHHHHHHHHHHHHHHHHHHc
Confidence            5566677776666553 1   23368999999 9999999999999998  999999987   1211  111 1    11


Q ss_pred             CCC--------CCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618           88 MDT--------GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus        88 ~~~--------~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                      ...        ...++.   ++|+ +++++||+||.++              .+|.++.+++..++.+++ |+++  +.|
T Consensus       389 g~~~~~~~~~~~~~i~~---~~~~-~~~~~aDlViEAv--------------~E~l~~K~~vf~~l~~~~~~~~i--las  448 (737)
T TIGR02441       389 KKITSLERDSILSNLTP---TLDY-SGFKNADMVIEAV--------------FEDLSLKHKVIKEVEAVVPPHCI--IAS  448 (737)
T ss_pred             CCCCHHHHHHHHhCeEE---eCCH-HHhccCCeehhhc--------------cccHHHHHHHHHHHHhhCCCCcE--EEE
Confidence            100        123443   4676 6899999999985              788999999999999999 5674  489


Q ss_pred             CCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          159 NPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       159 NPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |.+.+-..-++    .... .|+|++|+
T Consensus       449 NTSsl~i~~la----~~~~-~p~r~ig~  471 (737)
T TIGR02441       449 NTSALPIKDIA----AVSS-RPEKVIGM  471 (737)
T ss_pred             cCCCCCHHHHH----hhcC-CccceEEE
Confidence            99886643332    2233 35788886

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.63  E-value=3.6e-07  Score=87.99  Aligned_cols=119  Identities=16%  Similarity=0.178  Sum_probs=83.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHH-----H--H-HHhcCC-----CCCeEEEEeCCCchhhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGV-----T--A-DISHMD-----TGAVVRGFLGQPQLENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~-----~--~-dl~~~~-----~~~~v~~~~~t~d~~~al  107 (353)
                      .||+|||+ |.+|+.+|..++..|+  +|+++|+++ ....     .  + .+....     ....++.   ++++++++
T Consensus         8 ~~VaVIGa-G~MG~giA~~~a~aG~--~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~---~~~l~~av   81 (321)
T PRK07066          8 KTFAAIGS-GVIGSGWVARALAHGL--DVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRF---VATIEACV   81 (321)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhcee---cCCHHHHh
Confidence            58999999 9999999999999998  999999986 1111     0  0 111110     0123343   35788899


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      ++||+|+.++              .+|.++.+++...+.+++| ++  |+.||.+.+...   ++. .... .|+|++|+
T Consensus        82 ~~aDlViEav--------------pE~l~vK~~lf~~l~~~~~~~a--IlaSnTS~l~~s---~la-~~~~-~p~R~~g~  140 (321)
T PRK07066         82 ADADFIQESA--------------PEREALKLELHERISRAAKPDA--IIASSTSGLLPT---DFY-ARAT-HPERCVVG  140 (321)
T ss_pred             cCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCCe--EEEECCCccCHH---HHH-HhcC-CcccEEEE
Confidence            9999999985              6778889999999999995 55  568888876542   222 2222 35678776


Q ss_pred             c
Q 018618          187 T  187 (353)
Q Consensus       187 t  187 (353)
                      .
T Consensus       141 H  141 (321)
T PRK07066        141 H  141 (321)
T ss_pred             e
Confidence            3

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=98.58  E-value=4.2e-07  Score=96.27  Aligned_cols=120  Identities=18%  Similarity=0.280  Sum_probs=83.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHH-hCCCCcEEEEEeCCC--c-HHH--HH-HHh----cCCC--------CCeEEEEeCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN--T-PGV--TA-DIS----HMDT--------GAVVRGFLGQ  100 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~-~~~~~~el~L~D~~~--~-~~~--~~-dl~----~~~~--------~~~v~~~~~t  100 (353)
                      +..||+|||| |.+|+.+|..++ ..|+  +|+|+|.++  + .+.  .. .+.    ....        ...++.   +
T Consensus       303 ~i~~v~ViGa-G~mG~~iA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~  376 (699)
T TIGR02440       303 KIKKVGILGG-GLMGGGIASVTATKAGI--PVRIKDINPQGINNALKYAWKLLDKGVKRRHMTPAERDNQMALITG---T  376 (699)
T ss_pred             cccEEEEECC-cHHHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHcCeEE---e
Confidence            3468999999 999999999988 4788  999999987  1 111  11 111    1110        123443   4


Q ss_pred             CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       101 ~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      +|+ +++++||+||.++              .+++++.+++..++.+++ |++  |+.||.+.+-..-++    ... -.
T Consensus       377 ~~~-~~~~~adlViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~la----~~~-~~  434 (699)
T TIGR02440       377 TDY-RGFKDVDIVIEAV--------------FEDLALKHQMVKDIEQECAAHT--IFASNTSSLPIGQIA----AAA-SR  434 (699)
T ss_pred             CCh-HHhccCCEEEEec--------------cccHHHHHHHHHHHHhhCCCCc--EEEeCCCCCCHHHHH----Hhc-CC
Confidence            676 6899999999985              678899999999999999 466  448999886543332    222 24


Q ss_pred             CCceEeec
Q 018618          180 PKKLLGVT  187 (353)
Q Consensus       180 ~~kviG~t  187 (353)
                      |+|++|+.
T Consensus       435 p~r~~g~H  442 (699)
T TIGR02440       435 PENVIGLH  442 (699)
T ss_pred             cccEEEEe
Confidence            56888863

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.57  E-value=7.6e-07  Score=94.59  Aligned_cols=118  Identities=19%  Similarity=0.237  Sum_probs=84.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--HH----HH-hcCCC--------CCeEEEEeCCCch
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--TA----DI-SHMDT--------GAVVRGFLGQPQL  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~~----dl-~~~~~--------~~~v~~~~~t~d~  103 (353)
                      .||+|||| |.+|..+|..++..|+  +|+|+|+++  + .+.  ..    .+ .+...        ...++.   ++|+
T Consensus       314 ~~v~ViGa-G~mG~gIA~~~a~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~  387 (715)
T PRK11730        314 KQAAVLGA-GIMGGGIAYQSASKGV--PVIMKDINQKALDLGMTEAAKLLNKQVERGKIDGAKMAGVLSSIRP---TLDY  387 (715)
T ss_pred             ceEEEECC-chhHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEE---eCCH
Confidence            58999999 9999999999999998  999999987  1 111  11    11 11110        123443   4676


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  182 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k  182 (353)
                       +++++||+||.+.              .+++++.+++..++++++| ++  |+.||.+.+-..-++    .... .|+|
T Consensus       388 -~~~~~aDlViEav--------------~E~l~~K~~vf~~l~~~~~~~~--ilasNTSsl~i~~la----~~~~-~p~r  445 (715)
T PRK11730        388 -AGFERVDVVVEAV--------------VENPKVKAAVLAEVEQKVREDT--ILASNTSTISISLLA----KALK-RPEN  445 (715)
T ss_pred             -HHhcCCCEEEecc--------------cCcHHHHHHHHHHHHhhCCCCc--EEEEcCCCCCHHHHH----hhcC-CCcc
Confidence             6789999999985              7789999999999999994 66  449999886543222    2233 3578


Q ss_pred             eEeec
Q 018618          183 LLGVT  187 (353)
Q Consensus       183 viG~t  187 (353)
                      ++|+.
T Consensus       446 ~~g~H  450 (715)
T PRK11730        446 FCGMH  450 (715)
T ss_pred             EEEEe
Confidence            88873

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.54  E-value=7.8e-07  Score=84.48  Aligned_cols=119  Identities=19%  Similarity=0.278  Sum_probs=81.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHH-H--H---HH-HhcCC-C--------CCeEEEEeCCCch
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG-V--T---AD-ISHMD-T--------GAVVRGFLGQPQL  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~-~--~---~d-l~~~~-~--------~~~v~~~~~t~d~  103 (353)
                      .||+|||+ |.+|..+|..++..|+  +|+++|+++  +.. .  .   ++ +.+.. .        ..+++.   ++|+
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~l~~---~~~~   79 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGV--DVLVFETTEELATAGRNRIEKSLERAVSRGKLTERERDAALARLRF---TTDL   79 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcccCChhhHHHHHhCeEe---eCCH
Confidence            48999999 9999999999999998  999999987  111 1  0   11 11110 0        122333   4677


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                       +++++||+||.+.              .++.++.+++...+.+++  |+++  ++||........++    .... .++
T Consensus        80 -~~~~~~d~ViEav--------------~E~~~~K~~l~~~l~~~~~~~~~i--l~snTS~~~~~~la----~~~~-~~~  137 (286)
T PRK07819         80 -GDFADRQLVIEAV--------------VEDEAVKTEIFAELDKVVTDPDAV--LASNTSSIPIMKLA----AATK-RPG  137 (286)
T ss_pred             -HHhCCCCEEEEec--------------ccCHHHHHHHHHHHHHhhCCCCcE--EEECCCCCCHHHHH----hhcC-CCc
Confidence             6789999999985              677888999999999997  4664  47787765543322    2333 356


Q ss_pred             ceEeech
Q 018618          182 KLLGVTM  188 (353)
Q Consensus       182 kviG~t~  188 (353)
                      |++|+..
T Consensus       138 r~~g~hf  144 (286)
T PRK07819        138 RVLGLHF  144 (286)
T ss_pred             cEEEEec
Confidence            7887743

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=98.50  E-value=8.3e-07  Score=94.22  Aligned_cols=119  Identities=19%  Similarity=0.305  Sum_probs=84.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHH-hCCCCcEEEEEeCCC-c--HH--HHHH----H-hcCCC--------CCeEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN-T--PG--VTAD----I-SHMDT--------GAVVRGFLGQP  101 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~-~~~~~~el~L~D~~~-~--~~--~~~d----l-~~~~~--------~~~v~~~~~t~  101 (353)
                      ..||+|||| |.+|..+|..++ ..|+  +|+|+|.++ .  .+  ...+    + .....        ..+++.   ++
T Consensus       309 i~~v~ViGa-G~mG~giA~~~a~~~G~--~V~l~d~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~  382 (708)
T PRK11154        309 VNKVGVLGG-GLMGGGIAYVTATKAGL--PVRIKDINPQGINHALKYSWDLLDKKVKRRHLKPSERDKQMALISG---TT  382 (708)
T ss_pred             ccEEEEECC-chhhHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhcEEE---eC
Confidence            468999999 999999999998 7798  999999976 1  11  1111    1 11110        123444   46


Q ss_pred             chhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       102 d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |+ +++++||+||.+.              .+|.++.+++...+++++ |++++  .||.+.+...-++    .... .|
T Consensus       383 ~~-~~~~~aDlViEav--------------~E~~~~K~~v~~~le~~~~~~~il--asnTS~l~i~~la----~~~~-~p  440 (708)
T PRK11154        383 DY-RGFKHADVVIEAV--------------FEDLALKQQMVAEVEQNCAPHTIF--ASNTSSLPIGQIA----AAAA-RP  440 (708)
T ss_pred             Ch-HHhccCCEEeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----HhcC-cc
Confidence            76 6899999999985              788999999999999999 67744  8999886653332    2222 35


Q ss_pred             CceEeec
Q 018618          181 KKLLGVT  187 (353)
Q Consensus       181 ~kviG~t  187 (353)
                      +|++|+.
T Consensus       441 ~r~ig~H  447 (708)
T PRK11154        441 EQVIGLH  447 (708)
T ss_pred             cceEEEe
Confidence            6888873

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=98.49  E-value=3e-07  Score=81.78  Aligned_cols=123  Identities=20%  Similarity=0.297  Sum_probs=73.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC----------------CCCeEEEEeCCCchhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLEN  105 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~----------------~~~~v~~~~~t~d~~~  105 (353)
                      |||+|+|. |+||..+|..|+..|+  +++.+|+++.  .+..++...                ...+++.   ++|+++
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~--~V~g~D~~~~--~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~---t~~~~~   72 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGH--QVIGVDIDEE--KVEALNNGELPIYEPGLDELLKENVSAGRLRA---TTDIEE   72 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTS--EEEEE-S-HH--HHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEE---ESEHHH
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCC--EEEEEeCChH--HHHHHhhccccccccchhhhhccccccccchh---hhhhhh
Confidence            79999998 9999999999999998  9999999862  111222211                0234554   368888


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhHHHHHHHHHhCCC
Q 018618          106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ++++||+++++.+.|...+.+      -+...+...++.|.++. ++.+|++= |-|....-.++..++.+.++.
T Consensus        73 ai~~adv~~I~VpTP~~~~~~------~Dls~v~~a~~~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~  141 (185)
T PF03721_consen   73 AIKDADVVFICVPTPSDEDGS------PDLSYVESAIESIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGK  141 (185)
T ss_dssp             HHHH-SEEEE----EBETTTS------BETHHHHHHHHHHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCT
T ss_pred             hhhccceEEEecCCCccccCC------ccHHHHHHHHHHHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhccc
Confidence            899999999999887655321      12333455556666554 45554443 578877764555556665543

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.48  E-value=1.1e-07  Score=89.70  Aligned_cols=114  Identities=18%  Similarity=0.171  Sum_probs=73.6

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEE----EEeCC----CchhhhhC--CCc
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVR----GFLGQ----PQLENALT--GMD  111 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~----~~~~t----~d~~~al~--~AD  111 (353)
                      |.|+||+|++|+.++..|+..+. .+|+++|.++  +.....++........++    ...++    ..+..+++  +.|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p-~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGP-KKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB--SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCC-CeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence            68999999999999999998865 4899999988  444445553111111121    11111    23356677  999


Q ss_pred             EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          112 LVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       112 iVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +|+++|....-+-  ....+.+..|+-..+++++...+++-+-.|.+.|
T Consensus        80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~IST  128 (293)
T PF02719_consen   80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFIST  128 (293)
T ss_dssp             EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEE
T ss_pred             EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccc
Confidence            9999987654332  3467788999999999999999998777777776

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.47  E-value=1.5e-06  Score=82.40  Aligned_cols=119  Identities=20%  Similarity=0.331  Sum_probs=77.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHH----Hh-----cCCC---------CCeEEEEeCCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTAD----IS-----HMDT---------GAVVRGFLGQPQ  102 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~d----l~-----~~~~---------~~~v~~~~~t~d  102 (353)
                      +||+|||+ |.+|..+|..++..|+  +|+++|+++ ....+.+    +.     ....         ...++.   ++|
T Consensus         4 ~kIaViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~d   77 (287)
T PRK08293          4 KNVTVAGA-GVLGSQIAFQTAFHGF--DVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITL---TTD   77 (287)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEE---eCC
Confidence            59999999 9999999999999888  999999986 1111111    10     0010         012333   467


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      +++++++||+||++.              ..+.+..+++.+.+.++++ +++  +++|.+.....   ++. .... .+.
T Consensus        78 ~~~a~~~aDlVieav--------------pe~~~~k~~~~~~l~~~~~~~~i--i~sntSt~~~~---~~~-~~~~-~~~  136 (287)
T PRK08293         78 LAEAVKDADLVIEAV--------------PEDPEIKGDFYEELAKVAPEKTI--FATNSSTLLPS---QFA-EATG-RPE  136 (287)
T ss_pred             HHHHhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCCE--EEECcccCCHH---HHH-hhcC-Ccc
Confidence            878899999999985              3446677888888888875 553  35676654332   222 2222 345


Q ss_pred             ceEeec
Q 018618          182 KLLGVT  187 (353)
Q Consensus       182 kviG~t  187 (353)
                      |++|+.
T Consensus       137 r~vg~H  142 (287)
T PRK08293        137 KFLALH  142 (287)
T ss_pred             cEEEEc
Confidence            777763

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=98.44  E-value=5.1e-06  Score=75.72  Aligned_cols=102  Identities=19%  Similarity=0.121  Sum_probs=63.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||++|.+|++++..|.+.|.  +|.++|+++  ......+..+...  ........  ++.+++++++|+||++.
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~--~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~--~~~~ea~~~aDvVilav   76 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGN--KIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG--ADNAEAAKRADVVILAV   76 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCC--EEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE--eChHHHHhcCCEEEEEC
Confidence            6999998449999999999999886  999999876  2222222222110  11111111  23367899999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  163 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  163 (353)
                      ..                ..+.++++.+....++.+||-++||...
T Consensus        77 p~----------------~~~~~~l~~l~~~l~~~vvI~~~ngi~~  106 (219)
T TIGR01915        77 PW----------------DHVLKTLESLRDELSGKLVISPVVPLAS  106 (219)
T ss_pred             CH----------------HHHHHHHHHHHHhccCCEEEEeccCcee
Confidence            21                1123334444433344677888899875

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.43  E-value=3.2e-06  Score=85.39  Aligned_cols=166  Identities=19%  Similarity=0.225  Sum_probs=110.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCC--CcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENALTG--MDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~--ADi  112 (353)
                      .+.|.|+||+|++|+.++..++..+. .+|+++|.++  ......++.+.-...++..+.+    ..-.+.++++  .|+
T Consensus       250 gK~vLVTGagGSiGsel~~qil~~~p-~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~  328 (588)
T COG1086         250 GKTVLVTGGGGSIGSELCRQILKFNP-KEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDI  328 (588)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHhcCC-CEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCce
Confidence            45899999999999999999888854 5999999998  3444455554211233333322    2345678888  999


Q ss_pred             EEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec----CCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          113 VIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS----NPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       113 VIi~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t----NPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |+++|...+-|-+  ...+-...|+-..+++++...++.=+..|.+.|    ||.|+|                    |.
T Consensus       329 VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~PtNvm--------------------Ga  388 (588)
T COG1086         329 VFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNPTNVM--------------------GA  388 (588)
T ss_pred             EEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCCchHh--------------------hH
Confidence            9999987776654  456778999999999999999988777777776    555544                    44


Q ss_pred             chhhHHHHHHHHHHHhCCCCCC---C-cceEEeecCCCccccccccC
Q 018618          187 TMLDVVRANTFVAEVLGLDPRD---V-DVPVVGGHAGVTILPLLSQV  229 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~---v-~~~viG~hg~~~~vp~~s~~  229 (353)
                      |..-...+-..+++..+-....   | .+-|+|..|  +++|+|.+.
T Consensus       389 TKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG--SViPlFk~Q  433 (588)
T COG1086         389 TKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG--SVIPLFKKQ  433 (588)
T ss_pred             HHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC--CCHHHHHHH
Confidence            4322222222222211110111   2 366899988  599998753

>KOG2304 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Probab=98.41  E-value=2.8e-07  Score=82.80  Aligned_cols=121  Identities=21%  Similarity=0.329  Sum_probs=86.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c-----HHHHHHHhcCC----C-------------CCeEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T-----PGVTADISHMD----T-------------GAVVRG   96 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~-----~~~~~dl~~~~----~-------------~~~v~~   96 (353)
                      +...|+|+|| |.+|+.+|+..++.|+  .|+|+|.++ .     ++....+.+..    .             ..+++ 
T Consensus        10 ~~~~V~ivGa-G~MGSGIAQv~a~sg~--~V~l~d~~~~aL~~A~~~I~~sl~rvakKk~~~~~~~~~e~v~~~l~ri~-   85 (298)
T KOG2304|consen   10 EIKNVAIVGA-GQMGSGIAQVAATSGL--NVWLVDANEDALSRATKAISSSLKRVAKKKKADDPVALEEFVDDTLDRIK-   85 (298)
T ss_pred             cccceEEEcc-cccchhHHHHHHhcCC--ceEEecCCHHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHHHHHHHH-
Confidence            4458999999 9999999999999999  999999987 1     22222222211    0             01222 


Q ss_pred             EeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHh
Q 018618           97 FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus        97 ~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                        .++|.+.++.+||+||.+              ..+|+++.+++.+.+++.|+ ++  |..||.+.+.-.   .+. ..
T Consensus        86 --~~tnv~~~v~dadliiEA--------------ivEn~diK~~lF~~l~~~ak~~~--il~tNTSSl~lt---~ia-~~  143 (298)
T KOG2304|consen   86 --TSTNVSDAVSDADLIIEA--------------IVENLDIKRKLFKDLDKIAKSST--ILATNTSSLSLT---DIA-SA  143 (298)
T ss_pred             --HcCCHHHhhhhhHHHHHH--------------HHHhHHHHHHHHHHHHhhcccce--EEeecccceeHH---HHH-hh
Confidence              257888999999999887              48999999999999999996 55  348898775432   111 22


Q ss_pred             CCCCCCceEeec
Q 018618          176 GTYDPKKLLGVT  187 (353)
Q Consensus       176 ~~~~~~kviG~t  187 (353)
                      . -+|.|+.|+.
T Consensus       144 ~-~~~srf~GlH  154 (298)
T KOG2304|consen  144 T-QRPSRFAGLH  154 (298)
T ss_pred             c-cChhhhceee
Confidence            2 3466888884

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=98.39  E-value=2.2e-06  Score=81.17  Aligned_cols=116  Identities=17%  Similarity=0.280  Sum_probs=79.1

Q ss_pred             EEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCCCCCC
Q 018618           45 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVPRKP  123 (353)
Q Consensus        45 ~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~~~~~  123 (353)
                      .|+||+|++|++++..|++.|...+|..+|+........++........+.. +....++++|++++|+||++|+...-.
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            3899999999999999999986569999998762211112222221001111 122357889999999999998754333


Q ss_pred             C-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          124 G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       124 g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      + .....+...|+...+++.+..++..-..  +|+|....
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~Vkr--lVytSS~~  118 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAGVKR--LVYTSSIS  118 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcCCCE--EEEEcCcc
Confidence            4 4567788999999999999999875443  44444433

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=98.35  E-value=1.3e-06  Score=75.45  Aligned_cols=94  Identities=23%  Similarity=0.314  Sum_probs=64.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--CC------CeEEEEeCCCchhhhhCCCcEEE
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--TG------AVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--~~------~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      ||+|+|| |..|.++|..|..+|.  +|.|+++++.....+.-.+..  +.      ..+..   ++|+++++++||+||
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~--~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~---t~dl~~a~~~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGH--EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKA---TTDLEEALEDADIII   74 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTE--EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEE---ESSHHHHHTT-SEEE
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhCCCCCCCCCcccCccccc---ccCHHHHhCcccEEE
Confidence            8999999 9999999999999997  999999976222222222321  11      22433   478999999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEec
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLIS  158 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~t  158 (353)
                      ++.  |              ....+++++++..+-+ +..+++++
T Consensus        75 iav--P--------------s~~~~~~~~~l~~~l~~~~~ii~~~  103 (157)
T PF01210_consen   75 IAV--P--------------SQAHREVLEQLAPYLKKGQIIISAT  103 (157)
T ss_dssp             E-S-----------------GGGHHHHHHHHTTTSHTT-EEEETS
T ss_pred             ecc--c--------------HHHHHHHHHHHhhccCCCCEEEEec
Confidence            974  2              2236788888888874 45555443

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=98.35  E-value=1.2e-05  Score=78.07  Aligned_cols=170  Identities=14%  Similarity=0.044  Sum_probs=102.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHh-cC--CCCCeEEEEeC----CCchhhhhCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADIS-HM--DTGAVVRGFLG----QPQLENALTGMD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~-~~--~~~~~v~~~~~----t~d~~~al~~AD  111 (353)
                      ++||.|+||+|++|++++..|+..|.  +|+.+|...  ......++. ..  .....+..+.+    ..++++.++++|
T Consensus        15 ~~~vlVtGatGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         15 PKRWLITGVAGFIGSGLLEELLFLNQ--TVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            46999999999999999999999887  999999754  111111111 00  00112333221    123455679999


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCch---hHHHHHHHHHhCCCCCCceEe
Q 018618          112 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST---VPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       112 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~---t~~~~~~~~~~~~~~~~kviG  185 (353)
                      +||++|+....+  ..+..+....|+....++.+.+++.... .++.+|.. +...   .+.     ....-..|...+|
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-~~v~~SS~~vyg~~~~~~~-----~e~~~~~p~~~Y~  166 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-SFTYAASSSTYGDHPDLPK-----IEERIGRPLSPYA  166 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeechHhhCCCCCCCC-----CCCCCCCCCChhh
Confidence            999998754321  2344567789999999999999887543 34434321 1000   000     0111123445678


Q ss_pred             echhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          186 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       186 ~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      .+.+...++...+++..+++...++ +.++|.+.
T Consensus       167 ~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~  200 (348)
T PRK15181        167 VTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ  200 (348)
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence            8766666666666777788776664 66888643

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.32  E-value=6.4e-06  Score=82.78  Aligned_cols=169  Identities=11%  Similarity=-0.020  Sum_probs=99.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +|||.|+||+|+||++++..|+..|+  +|+.+|...  .......+.   ....+..+.. +-+..++.++|+||++|+
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~--~V~~ldr~~~~~~~~~~~~~---~~~~~~~~~~-Di~~~~~~~~D~ViHlAa  193 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGD--EVIVIDNFFTGRKENLVHLF---GNPRFELIRH-DVVEPILLEVDQIYHLAC  193 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCCCccHhHhhhhc---cCCceEEEEC-ccccccccCCCEEEECce
Confidence            58999999999999999999999988  999999753  111111111   1123333221 222345789999999987


Q ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchh--HHHHHHHHH-hCCCCCCceEeechhhHH
Q 018618          119 VPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTV--PIAAEVFKK-AGTYDPKKLLGVTMLDVV  192 (353)
Q Consensus       119 ~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t--~~~~~~~~~-~~~~~~~kviG~t~ld~~  192 (353)
                      ...  ....+..+++..|+....++++.+++.+.  .+|++|.- +....  ....+-.+. ..-+.+...+|.+.+...
T Consensus       194 ~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~--r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE  271 (436)
T PLN02166        194 PASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAE  271 (436)
T ss_pred             eccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHH
Confidence            532  22234567788999999999999998753  55555431 11000  000000000 001223345777666666


Q ss_pred             HHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          193 RANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       193 R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ++-..+++..+++..-++ ..++|.+
T Consensus       272 ~~~~~y~~~~~l~~~ilR~~~vYGp~  297 (436)
T PLN02166        272 TLAMDYHRGAGVEVRIARIFNTYGPR  297 (436)
T ss_pred             HHHHHHHHHhCCCeEEEEEccccCCC
Confidence            665666666676554443 3467754

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.32  E-value=3.8e-06  Score=79.80  Aligned_cols=118  Identities=14%  Similarity=0.194  Sum_probs=75.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHH-H-------Hh---c-CCC--------CCeEEEEeCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTA-D-------IS---H-MDT--------GAVVRGFLGQ  100 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~-d-------l~---~-~~~--------~~~v~~~~~t  100 (353)
                      .||+|||+ |.+|..++..++..|+  +|+++|+++ ....+. .       +.   + ...        ...+..   +
T Consensus         4 ~~I~ViGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~l~~~~~~i~~~~~~l~~~~~~g~~~~~~~~~~~~~i~~---~   77 (291)
T PRK06035          4 KVIGVVGS-GVMGQGIAQVFARTGY--DVTIVDVSEEILKNAMELIESGPYGLRNLVEKGKMSEDEAKAIMARIRT---S   77 (291)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHhhhhhHHHHHHcCCCCHHHHHHHHhCcEe---e
Confidence            48999999 9999999999999998  999999987 111111 1       11   1 000        011222   3


Q ss_pred             CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       101 ~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      +++ +++++||+||.+.              ..+.++.+++.+.+.++++ ++++  +||.......-+   . ... -.
T Consensus        78 ~~~-~~~~~aDlVieav--------------~e~~~~k~~~~~~l~~~~~~~~il--~S~tsg~~~~~l---a-~~~-~~  135 (291)
T PRK06035         78 TSY-ESLSDADFIVEAV--------------PEKLDLKRKVFAELERNVSPETII--ASNTSGIMIAEI---A-TAL-ER  135 (291)
T ss_pred             CCH-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCeEE--EEcCCCCCHHHH---H-hhc-CC
Confidence            566 6789999999985              3345667788888888875 5644  566655443222   1 222 23


Q ss_pred             CCceEeec
Q 018618          180 PKKLLGVT  187 (353)
Q Consensus       180 ~~kviG~t  187 (353)
                      +.|++|+.
T Consensus       136 ~~r~ig~h  143 (291)
T PRK06035        136 KDRFIGMH  143 (291)
T ss_pred             cccEEEEe
Confidence            56788874

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.32  E-value=8.8e-06  Score=76.93  Aligned_cols=118  Identities=21%  Similarity=0.365  Sum_probs=78.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH-----H-HHHhcCC-C--------CCeEEEEeCCCch
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV-----T-ADISHMD-T--------GAVVRGFLGQPQL  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~-----~-~dl~~~~-~--------~~~v~~~~~t~d~  103 (353)
                      .||+|||+ |.+|..++..++..|+  +|+++|+++  . .+.     . .++.... .        ...++.   ++|+
T Consensus         4 ~kI~VIG~-G~mG~~ia~~la~~g~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~l~~---~~~~   77 (282)
T PRK05808          4 QKIGVIGA-GTMGNGIAQVCAVAGY--DVVMVDISDAAVDRGLATITKSLDRLVKKGKMTEADKEAALARITG---TTDL   77 (282)
T ss_pred             cEEEEEcc-CHHHHHHHHHHHHCCC--ceEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence            48999999 9999999999999988  999999987  1 111     0 1111111 0        013333   3565


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  182 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k  182 (353)
                       +++++||+||+++              .++....+++.+.+.++++ ++++  +||-..+-...++    ...+. +.|
T Consensus        78 -~~~~~aDlVi~av--------------~e~~~~k~~~~~~l~~~~~~~~il--~s~ts~~~~~~la----~~~~~-~~r  135 (282)
T PRK05808         78 -DDLKDADLVIEAA--------------TENMDLKKKIFAQLDEIAKPEAIL--ATNTSSLSITELA----AATKR-PDK  135 (282)
T ss_pred             -HHhccCCeeeecc--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----HhhCC-Ccc
Confidence             5689999999985              4556777888888998885 5644  6777665543322    22233 457


Q ss_pred             eEeec
Q 018618          183 LLGVT  187 (353)
Q Consensus       183 viG~t  187 (353)
                      ++|+.
T Consensus       136 ~ig~h  140 (282)
T PRK05808        136 VIGMH  140 (282)
T ss_pred             eEEee
Confidence            88874

>PLN02427 UDP-apiose/xylose synthase

Probab=98.25  E-value=1.2e-05  Score=79.10  Aligned_cols=114  Identities=17%  Similarity=0.094  Sum_probs=73.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcC---CCCCeEEEEe----CCCchhhhhCCCc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHM---DTGAVVRGFL----GQPQLENALTGMD  111 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~---~~~~~v~~~~----~t~d~~~al~~AD  111 (353)
                      ++|||.|+||+|++|++++..|... +.  +|+.+|.+....  ..+...   .....++.+.    ...+++++++++|
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~--~V~~l~r~~~~~--~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d   88 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPH--KVLALDVYNDKI--KHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMAD   88 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCC--EEEEEecCchhh--hhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCC
Confidence            4689999999999999999999987 46  899999754211  111111   0011233321    1234567788999


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          112 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       112 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +||++|+.....  .....+.+..|+....++++..++..  ..+|.+|.
T Consensus        89 ~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS  136 (386)
T PLN02427         89 LTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFST  136 (386)
T ss_pred             EEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEee
Confidence            999999754211  12234556778888888888887665  34555543

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=98.24  E-value=1.3e-05  Score=81.18  Aligned_cols=119  Identities=15%  Similarity=0.183  Sum_probs=76.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC---------------CCCeEEEEeCCCchhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---------------TGAVVRGFLGQPQLEN  105 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~---------------~~~~v~~~~~t~d~~~  105 (353)
                      +|||+|+|+ |+||..+|..|+..|...+|+.+|+++.+  +..+....               ....+..   ++|+++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~--v~~l~~g~~~~~e~gl~ell~~~~~~~l~~---t~~~~~   74 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPR--IDAWNSDQLPIYEPGLDEVVKQCRGKNLFF---STDVEK   74 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHH--HHHHHcCCCccCCCCHHHHHHHhhcCCEEE---EcCHHH
Confidence            489999999 99999999999998644489999998621  11222110               0112333   467778


Q ss_pred             hhCCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE-e-cCCCCchhHH
Q 018618          106 ALTGMDLVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNL-I-SNPVNSTVPI  167 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~-tNPv~~~t~~  167 (353)
                      ++++||++|++.+.|...+- .. + -.-++..+.+.++.|.++.++..+++ - |.|....-.+
T Consensus        75 ~i~~advi~I~V~TP~~~~g~~~-~-~~~Dls~v~~a~~~i~~~l~~~~lVv~~STvp~Gtt~~~  137 (473)
T PLN02353         75 HVAEADIVFVSVNTPTKTRGLGA-G-KAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAI  137 (473)
T ss_pred             HHhcCCEEEEEeCCCCCCCCCcC-C-CCCcHHHHHHHHHHHHhhCCCCcEEEEeCCCCCChHHHH
Confidence            89999999999998864311 00 0 02234456777777777765443333 2 5888766444

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.21  E-value=2.3e-05  Score=82.86  Aligned_cols=180  Identities=15%  Similarity=0.082  Sum_probs=107.9

Q ss_pred             hhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-Cc-
Q 018618           26 SCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ-  102 (353)
Q Consensus        26 ~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~d-  102 (353)
                      .|-++-.|...   +.|||.|+||+|++|++++..|... ++  +|+.+|+.... . .++..   ...++.+.+. .| 
T Consensus       303 ~~~~~~~~~~~---~~~~VLVTGatGFIGs~Lv~~Ll~~~g~--~V~~l~r~~~~-~-~~~~~---~~~~~~~~gDl~d~  372 (660)
T PRK08125        303 RLNSKPACSAK---RRTRVLILGVNGFIGNHLTERLLRDDNY--EVYGLDIGSDA-I-SRFLG---HPRFHFVEGDISIH  372 (660)
T ss_pred             Eecccchhhhh---cCCEEEEECCCchHHHHHHHHHHhCCCc--EEEEEeCCchh-h-hhhcC---CCceEEEeccccCc
Confidence            35666666554   7789999999999999999999874 67  99999976521 1 11111   1122222111 11 


Q ss_pred             ---hhhhhCCCcEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC-CCCchh--HHHHHHHHH
Q 018618          103 ---LENALTGMDLVIIPAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV--PIAAEVFKK  174 (353)
Q Consensus       103 ---~~~al~~ADiVIi~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN-Pv~~~t--~~~~~~~~~  174 (353)
                         ++++++++|+||++|+...  .......+++..|+....++.+.++++. . .+|..|. -+....  ....+-...
T Consensus       373 ~~~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~-~~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T PRK08125        373 SEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-K-RIIFPSTSEVYGMCTDKYFDEDTSN  450 (660)
T ss_pred             HHHHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-C-eEEEEcchhhcCCCCCCCcCccccc
Confidence               3457899999999987543  2223455677889999999999999876 3 4444433 221100  000000000


Q ss_pred             ---hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          175 ---AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       175 ---~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                         .+..++...+|.+.+...++-..+++..|++..-++ ..++|.+
T Consensus       451 ~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        451 LIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPR  497 (660)
T ss_pred             cccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCC
Confidence               000012236888766666776777788788766665 4577864

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=98.21  E-value=5.7e-06  Score=84.47  Aligned_cols=121  Identities=21%  Similarity=0.302  Sum_probs=80.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--H---H-HHhcCC-C--------CCeEEEEeCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--T---A-DISHMD-T--------GAVVRGFLGQPQ  102 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~---~-dl~~~~-~--------~~~v~~~~~t~d  102 (353)
                      ..||+|||+ |.+|+.+|..++..|+  +|+++|+++  + .+.  .   + .+.... .        ..+++.   ++|
T Consensus         5 ~~kV~VIGa-G~MG~gIA~~la~aG~--~V~l~d~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~   78 (503)
T TIGR02279         5 VVTVAVIGA-GAMGAGIAQVAASAGH--QVLLYDIRAEALARAIAGIEARLNSLVTKGKLTAEECERTLKRLIP---VTD   78 (503)
T ss_pred             ccEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHhccEE---eCC
Confidence            458999999 9999999999999998  999999987  1 111  0   0 111110 0        122443   357


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  182 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k  182 (353)
                      + +++.+||+||.+.              .++.++.+.+...+.+++|... |++||.+.+-..-++.   . .. .+.|
T Consensus        79 ~-~~l~~aDlVIEav--------------~E~~~vK~~vf~~l~~~~~~~~-IlasnTStl~i~~iA~---~-~~-~p~r  137 (503)
T TIGR02279        79 L-HALADAGLVIEAI--------------VENLEVKKALFAQLEELCPADT-IIASNTSSLSITAIAA---G-LA-RPER  137 (503)
T ss_pred             H-HHhCCCCEEEEcC--------------cCcHHHHHHHHHHHHhhCCCCe-EEEECCCCCCHHHHHH---h-cC-cccc
Confidence            6 5689999999984              5667788888888999986433 3578887765432221   2 22 2456


Q ss_pred             eEeech
Q 018618          183 LLGVTM  188 (353)
Q Consensus       183 viG~t~  188 (353)
                      ++|+..
T Consensus       138 ~~G~HF  143 (503)
T TIGR02279       138 VAGLHF  143 (503)
T ss_pred             eEEEec
Confidence            777643

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=98.18  E-value=1.3e-05  Score=82.11  Aligned_cols=120  Identities=21%  Similarity=0.301  Sum_probs=78.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--HHH----Hh-cCC--------CCCeEEEEeCCCch
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--TAD----IS-HMD--------TGAVVRGFLGQPQL  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~~d----l~-~~~--------~~~~v~~~~~t~d~  103 (353)
                      .||+|||+ |.+|..+|..++..|+  +|+++|+++  + .+.  ..+    +. +..        ...+++.   ++++
T Consensus         8 ~~V~VIGa-G~MG~gIA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~~~   81 (507)
T PRK08268          8 ATVAVIGA-GAMGAGIAQVAAQAGH--TVLLYDARAGAAAAARDGIAARLAKLVEKGKLTAEQADAALARLRP---VEAL   81 (507)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCCH
Confidence            58999999 9999999999999998  999999987  1 111  111    11 110        0122443   3566


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  182 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k  182 (353)
                       +++++||+||.+.              .++.++.+.+...+.+.+ |++++  +||.+.+-..-++    .... .|+|
T Consensus        82 -~~~~~aDlViEav--------------~E~~~vK~~vf~~l~~~~~~~ail--asntStl~i~~la----~~~~-~p~r  139 (507)
T PRK08268         82 -ADLADCDLVVEAI--------------VERLDVKQALFAQLEAIVSPDCIL--ATNTSSLSITAIA----AALK-HPER  139 (507)
T ss_pred             -HHhCCCCEEEEcC--------------cccHHHHHHHHHHHHhhCCCCcEE--EECCCCCCHHHHH----hhcC-Cccc
Confidence             5688999999984              566777888888899988 56644  6666654432221    2222 3567


Q ss_pred             eEeechh
Q 018618          183 LLGVTML  189 (353)
Q Consensus       183 viG~t~l  189 (353)
                      ++|+..+
T Consensus       140 ~~G~hff  146 (507)
T PRK08268        140 VAGLHFF  146 (507)
T ss_pred             EEEEeec
Confidence            7776433

>PLN02650 dihydroflavonol-4-reductase

Probab=98.18  E-value=3.8e-05  Score=74.52  Aligned_cols=179  Identities=15%  Similarity=0.051  Sum_probs=101.3

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcC-CCCCeEEEEe----CCCchhhhhCCCc
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHM-DTGAVVRGFL----GQPQLENALTGMD  111 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~-~~~~~v~~~~----~t~d~~~al~~AD  111 (353)
                      ++..++|.|+||+|++|++++..|+..|.  +|++++.+.. .....++... .....+..+.    ....++++++++|
T Consensus         2 ~~~~k~iLVTGatGfIGs~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d   79 (351)
T PLN02650          2 GSQKETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCT   79 (351)
T ss_pred             CCCCCEEEEeCCcHHHHHHHHHHHHHCCC--EEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCC
Confidence            34456999999999999999999999988  8888877541 1111122111 1011222211    1234567788999


Q ss_pred             EEEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCch----hHHHHHHHH---Hh--CCCCC
Q 018618          112 LVIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST----VPIAAEVFK---KA--GTYDP  180 (353)
Q Consensus       112 iVIi~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~----t~~~~~~~~---~~--~~~~~  180 (353)
                      +||++|+.......+ ..+.+..|+....++++.+.+...-..+|++|.. +..-    .+...+-.+   ..  ...++
T Consensus        80 ~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~  159 (351)
T PLN02650         80 GVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMT  159 (351)
T ss_pred             EEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccc
Confidence            999998753211112 2356788999999999999876532345554432 1000    000000000   00  00001


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      ...+|.+.+....+-..+++..|++..-++ +.++|...
T Consensus       160 ~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        160 GWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFI  198 (351)
T ss_pred             cchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCC
Confidence            124666666666666667777787665553 55788643

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=98.17  E-value=5.4e-05  Score=73.49  Aligned_cols=175  Identities=14%  Similarity=0.074  Sum_probs=97.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEE-EeCCCchhhhhCC--CcEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENALTG--MDLVI  114 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~--ADiVI  114 (353)
                      +.++|.|+||+|++|++++..|++.|.  +|+.+|++..  ......+........+.. .....++.+.+++  .|+||
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi   80 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA--EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVF   80 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC--EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEE
Confidence            457999999999999999999999887  8999997662  111111211100001111 1111234455554  59999


Q ss_pred             EcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechhhH
Q 018618          115 IPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  191 (353)
Q Consensus       115 i~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~  191 (353)
                      .+++.+..  ...+....+..|+.....+++.+.+.+....++++|.. +........ ........++...+|.+....
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~-~~~e~~~~~p~~~Y~~sK~~~  159 (349)
T TIGR02622        81 HLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVW-GYRETDPLGGHDPYSSSKACA  159 (349)
T ss_pred             ECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCC-CCccCCCCCCCCcchhHHHHH
Confidence            99885422  11234556788999999999998876533355555542 111000000 000111233445677776666


Q ss_pred             HHHHHHHHHHh-------CCCCCCCc-ceEEeec
Q 018618          192 VRANTFVAEVL-------GLDPRDVD-VPVVGGH  217 (353)
Q Consensus       192 ~R~~~~lA~~l-------~v~~~~v~-~~viG~h  217 (353)
                      .++-..+++.+       +++...++ +.++|..
T Consensus       160 e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       160 ELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             HHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            66655666654       44443342 4566643

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.16  E-value=3.2e-05  Score=73.45  Aligned_cols=121  Identities=21%  Similarity=0.331  Sum_probs=73.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHH----HH----hcCCCC--------CeEEEEeCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTA----DI----SHMDTG--------AVVRGFLGQPQ  102 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~----dl----~~~~~~--------~~v~~~~~t~d  102 (353)
                      .+||+|||+ |.+|..+|..++..|+  +|+++|+++  ......    .+    ......        ..++.   +++
T Consensus         4 ~~kI~vIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~   77 (292)
T PRK07530          4 IKKVGVIGA-GQMGNGIAHVCALAGY--DVLLNDVSADRLEAGLATINGNLARQVAKGKISEEARAAALARIST---ATD   77 (292)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEe---eCC
Confidence            358999999 9999999999999998  999999986  111111    11    111100        12333   356


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      + +++++||+||++.              .++....+.+.+.+..++ |++++  +||.+.+-..   ++... . -.+.
T Consensus        78 ~-~~~~~aD~Vieav--------------pe~~~~k~~~~~~l~~~~~~~~ii--~s~ts~~~~s---~la~~-~-~~~~  135 (292)
T PRK07530         78 L-EDLADCDLVIEAA--------------TEDETVKRKIFAQLCPVLKPEAIL--ATNTSSISIT---RLASA-T-DRPE  135 (292)
T ss_pred             H-HHhcCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEcCCCCCHH---HHHhh-c-CCcc
Confidence            6 5689999999984              223344556667777777 46644  4666554432   22222 2 2345


Q ss_pred             ceEeechh
Q 018618          182 KLLGVTML  189 (353)
Q Consensus       182 kviG~t~l  189 (353)
                      |++|+..+
T Consensus       136 r~~g~h~~  143 (292)
T PRK07530        136 RFIGIHFM  143 (292)
T ss_pred             cEEEeecc
Confidence            77776433

>PLN00198 anthocyanidin reductase; Provisional

Probab=98.15  E-value=5.6e-05  Score=72.93  Aligned_cols=174  Identities=17%  Similarity=0.082  Sum_probs=99.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII  115 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi  115 (353)
                      ++||.|+||+|++|++++..|++.|.  +|++++++. ......++........+..+.+    ..++.++++++|+||+
T Consensus         9 ~~~vlItG~~GfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   86 (338)
T PLN00198          9 KKTACVIGGTGFLASLLIKLLLQKGY--AVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH   86 (338)
T ss_pred             CCeEEEECCchHHHHHHHHHHHHCCC--EEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence            46899999999999999999999987  887776654 2222111211110112332211    1235567889999999


Q ss_pred             cCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCch------hHHHHHH------HHHhCCCCCC
Q 018618          116 PAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST------VPIAAEV------FKKAGTYDPK  181 (353)
Q Consensus       116 ~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~------t~~~~~~------~~~~~~~~~~  181 (353)
                      +|+.......+ ..+++..|+.....+++.+.+...-..++++|.- +...      .....+-      ... .-.++.
T Consensus        87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~-~~~~p~  165 (338)
T PLN00198         87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLT-SEKPPT  165 (338)
T ss_pred             eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhh-hcCCcc
Confidence            98743221122 2345688999999999999876422244444321 1100      0000000      000 012344


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ..+|.+.+...++-..+++..|++..-++ ..|+|.+
T Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        166 WGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPS  202 (338)
T ss_pred             chhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCC
Confidence            55777666666666667777777655553 5577865

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=98.14  E-value=2.3e-05  Score=75.52  Aligned_cols=113  Identities=17%  Similarity=0.227  Sum_probs=75.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH--HHHHHhcCCCCCeEEEEe----CCCchhhhhCCCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFL----GQPQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~~~~~v~~~~----~t~d~~~al~~ADiVI  114 (353)
                      .++|.|+||+|++|++++..|+..+...+|+++|.+....  ...++..    ..+..+.    ...++.+++++.|+||
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~v~~Dl~d~~~l~~~~~~iD~Vi   79 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPA----PCLRFFIGDVRDKERLTRALRGVDYVV   79 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCC----CcEEEEEccCCCHHHHHHHHhcCCEEE
Confidence            4689999999999999999998876333899999765221  1112211    1222211    1234556788999999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +++|....+  ..+..+.+..|+.....+++.+.+.... .+|++|
T Consensus        80 h~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~-~iV~~S  124 (324)
T TIGR03589        80 HAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVK-RVVALS  124 (324)
T ss_pred             ECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEe
Confidence            998864322  2345577889999999999999876533 444444

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=98.13  E-value=5.2e-05  Score=72.29  Aligned_cols=113  Identities=17%  Similarity=0.128  Sum_probs=73.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCC-CCCeEEEE----eCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMD-TGAVVRGF----LGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~-~~~~v~~~----~~t~d~~~al~~ADiVIi  115 (353)
                      +||.|+||+|++|++++..|+..|+  +|++++.+.. ......+.... ....+..+    ....++.++++++|+||+
T Consensus         5 ~~ilVtGatGfIG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih   82 (322)
T PLN02662          5 KVVCVTGASGYIASWLVKLLLQRGY--TVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH   82 (322)
T ss_pred             CEEEEECChHHHHHHHHHHHHHCCC--EEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence            5899999999999999999999998  8888877652 11112222111 01122222    112356678899999999


Q ss_pred             cCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEe
Q 018618          116 PAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKC-CPNATVNLI  157 (353)
Q Consensus       116 ~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~  157 (353)
                      +++........ ..+++..|+....++++.+.+. ... .++++
T Consensus        83 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~~v~~  125 (322)
T PLN02662         83 TASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVK-RVVVT  125 (322)
T ss_pred             eCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCC-EEEEc
Confidence            98754221122 2366788999999999998876 333 34443

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.12  E-value=1.7e-05  Score=75.27  Aligned_cols=99  Identities=20%  Similarity=0.270  Sum_probs=64.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHH---HHH-----hcCCC--------CCeEEEEeCCCch
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVT---ADI-----SHMDT--------GAVVRGFLGQPQL  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~---~dl-----~~~~~--------~~~v~~~~~t~d~  103 (353)
                      .||+|||+ |.+|..+|..|+..|+  +|+++|+++  .....   .++     .....        ...++.   ++++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~   75 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGF--QTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSY---SLDL   75 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCC--cEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEE---eCcH
Confidence            48999999 9999999999999988  999999987  11111   011     01000        012333   3567


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCC
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVN  162 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~  162 (353)
                      ++++++||+||.+.              ..+..+.+.+...+.++++ ++++  ++|.+.
T Consensus        76 ~~~~~~aD~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~il--~~~tSt  119 (288)
T PRK09260         76 KAAVADADLVIEAV--------------PEKLELKKAVFETADAHAPAECYI--ATNTST  119 (288)
T ss_pred             HHhhcCCCEEEEec--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEcCCC
Confidence            78899999999985              2234445566666777774 5543  455544

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=98.12  E-value=3.5e-05  Score=73.75  Aligned_cols=119  Identities=16%  Similarity=0.123  Sum_probs=81.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHH--HHHHHhcCCCCCeEEEE----eCCCchhhhhCCCc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPG--VTADISHMDTGAVVRGF----LGQPQLENALTGMD  111 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~--~~~dl~~~~~~~~v~~~----~~t~d~~~al~~AD  111 (353)
                      ..++|+|+||+|++|+.++..|++.|+  +|+--=+++  .+.  +..+|....  .++..+    ...+.+..|+++||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY--~V~gtVR~~~~~k~~~~L~~l~~a~--~~l~l~~aDL~d~~sf~~ai~gcd   80 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGY--TVRGTVRDPEDEKKTEHLRKLEGAK--ERLKLFKADLLDEGSFDKAIDGCD   80 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCC--EEEEEEcCcchhhhHHHHHhcccCc--ccceEEeccccccchHHHHHhCCC
Confidence            457999999999999999999999999  555444443  222  344555332  112222    12356779999999


Q ss_pred             EEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618          112 LVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  163 (353)
Q Consensus       112 iVIi~ag~~~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  163 (353)
                      .|+++|....-... .-.+++.-.++...++.+.+.++. ...=+++|+....
T Consensus        81 gVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aA  132 (327)
T KOG1502|consen   81 GVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAA  132 (327)
T ss_pred             EEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHH
Confidence            99999865432222 244788899999999999999887 4444556655433

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.11  E-value=1.8e-05  Score=75.80  Aligned_cols=119  Identities=24%  Similarity=0.353  Sum_probs=71.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcC-------C----CCCeEEEEeCCCchhhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM-------D----TGAVVRGFLGQPQLENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~-------~----~~~~v~~~~~t~d~~~al~  108 (353)
                      +||+|||+ |.+|..++..|+..|+  +|+++|.++  .......+.+.       .    ....++.   ++|++++++
T Consensus         5 ~~I~vIGa-G~mG~~iA~~l~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~   78 (311)
T PRK06130          5 QNLAIIGA-GTMGSGIAALFARKGL--QVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRM---EAGLAAAVS   78 (311)
T ss_pred             cEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEE---eCCHHHHhc
Confidence            58999999 9999999999999887  999999876  11111111100       0    0011232   356777899


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      +||+||++.              ........++...+..+++ +++|  +||.+.+...   ++. .... .+.+++|+.
T Consensus        79 ~aDlVi~av--------------~~~~~~~~~v~~~l~~~~~~~~ii--~s~tsg~~~~---~l~-~~~~-~~~~~ig~h  137 (311)
T PRK06130         79 GADLVIEAV--------------PEKLELKRDVFARLDGLCDPDTIF--ATNTSGLPIT---AIA-QAVT-RPERFVGTH  137 (311)
T ss_pred             cCCEEEEec--------------cCcHHHHHHHHHHHHHhCCCCcEE--EECCCCCCHH---HHH-hhcC-CcccEEEEc
Confidence            999999984              2223345556666776664 5543  4555554332   221 2211 245777764

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.10  E-value=3.3e-05  Score=77.79  Aligned_cols=169  Identities=12%  Similarity=0.019  Sum_probs=96.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .|||.|+||+|+||++++..|++.|+  +|+.+|...  .......  +.. ...++.+.. +-+..++.++|+||++|+
T Consensus       119 ~~kILVTGatGfIGs~Lv~~Ll~~G~--~V~~ld~~~~~~~~~~~~--~~~-~~~~~~i~~-D~~~~~l~~~D~ViHlAa  192 (442)
T PLN02206        119 GLRVVVTGGAGFVGSHLVDRLMARGD--SVIVVDNFFTGRKENVMH--HFS-NPNFELIRH-DVVEPILLEVDQIYHLAC  192 (442)
T ss_pred             CCEEEEECcccHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhhh--hcc-CCceEEEEC-CccChhhcCCCEEEEeee
Confidence            48999999999999999999999987  899998643  1111111  111 123333221 122356789999999987


Q ss_pred             CCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchh--HHHHHHHHH-hCCCCCCceEeechhhHH
Q 018618          119 VPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTV--PIAAEVFKK-AGTYDPKKLLGVTMLDVV  192 (353)
Q Consensus       119 ~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t--~~~~~~~~~-~~~~~~~kviG~t~ld~~  192 (353)
                      ...  ....+..+.+..|+....++++.+++..  ..+|++|.- +....  ....+-.+. ..-..+...+|.+.....
T Consensus       193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE  270 (442)
T PLN02206        193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG--ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAE  270 (442)
T ss_pred             ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC--CEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHH
Confidence            532  1122456678899999999999998775  355555431 11000  000000000 000111234565555555


Q ss_pred             HHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          193 RANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       193 R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ++-..+.+..+++..-++ ..++|.+
T Consensus       271 ~~~~~y~~~~g~~~~ilR~~~vyGp~  296 (442)
T PLN02206        271 TLTMDYHRGANVEVRIARIFNTYGPR  296 (442)
T ss_pred             HHHHHHHHHhCCCeEEEEeccccCCC
Confidence            554555566666554443 3466754

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.09  E-value=6e-05  Score=72.25  Aligned_cols=103  Identities=24%  Similarity=0.269  Sum_probs=66.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHH--------HHhcCCC---------CCeEEEEeCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA--------DISHMDT---------GAVVRGFLGQPQ  102 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~--------dl~~~~~---------~~~v~~~~~t~d  102 (353)
                      .+||+|||+ |.+|+.++..|+..|+  +|+++|+++. .....        .+.....         ...++.   ++|
T Consensus         2 ~~~V~VIG~-G~mG~~iA~~la~~G~--~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~---~~~   75 (308)
T PRK06129          2 MGSVAIIGA-GLIGRAWAIVFARAGH--EVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV---TDS   75 (308)
T ss_pred             CcEEEEECc-cHHHHHHHHHHHHCCC--eeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE---ECc
Confidence            468999998 9999999999999998  9999999861 11110        1211110         112333   357


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCch
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST  164 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~  164 (353)
                      +.+++++||+|+.+.              ..+....+.+...+.+.+++..++ .||.....
T Consensus        76 ~~~a~~~ad~Vi~av--------------pe~~~~k~~~~~~l~~~~~~~~ii-~ssts~~~  122 (308)
T PRK06129         76 LADAVADADYVQESA--------------PENLELKRALFAELDALAPPHAIL-ASSTSALL  122 (308)
T ss_pred             HHHhhCCCCEEEECC--------------cCCHHHHHHHHHHHHHhCCCcceE-EEeCCCCC
Confidence            778899999999984              222344455666677777654444 45554433

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=98.07  E-value=7e-05  Score=70.74  Aligned_cols=167  Identities=15%  Similarity=0.060  Sum_probs=97.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--H-HHHHHHhcCCCCCeEEEEe----CCCchhhhhCC--CcEE
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--P-GVTADISHMDTGAVVRGFL----GQPQLENALTG--MDLV  113 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~-~~~~dl~~~~~~~~v~~~~----~t~d~~~al~~--ADiV  113 (353)
                      ||.|+||+|++|++++..|+..+...+|+++|....  . ....++...   ..+..+.    ...++.+++++  +|+|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~v   77 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDN---PRYRFVKGDIGDRELVSRLFTEHQPDAV   77 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccC---CCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence            589999999999999998887763338899986431  1 111222211   1222211    12345566776  8999


Q ss_pred             EEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCc----hhHHHHHHHHHhCCCCCCceEee
Q 018618          114 IIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNS----TVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       114 Ii~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~----~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |.+++....  .......++..|+.....+++.+.+...+..++.+|.. +..    ..+.     .......+...+|.
T Consensus        78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~-----~e~~~~~~~~~Y~~  152 (317)
T TIGR01181        78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAF-----TETTPLAPSSPYSA  152 (317)
T ss_pred             EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCc-----CCCCCCCCCCchHH
Confidence            999875321  12234456788999999999999877555556555431 100    0000     01112334445676


Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      +.....++-..+++..+++..-++ ..++|..
T Consensus       153 sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       153 SKAASDHLVRAYHRTYGLPALITRCSNNYGPY  184 (317)
T ss_pred             HHHHHHHHHHHHHHHhCCCeEEEEeccccCCC
Confidence            655555665666777777654443 4466643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.07  E-value=1.9e-05  Score=77.63  Aligned_cols=170  Identities=15%  Similarity=0.069  Sum_probs=97.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE--EeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~--~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+|||.|+||+|++|++++..|...|+  +|+.+|+.... .   +...........  .....++..+++++|+||+++
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~--~V~~v~r~~~~-~---~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   93 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGH--YIIASDWKKNE-H---MSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLA   93 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCC--EEEEEEecccc-c---cccccccceEEECCCCCHHHHHHHHhCCCEEEEcc
Confidence            457999999999999999999999888  99999975311 0   000000011110  001123345678999999998


Q ss_pred             CCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchh-------HHHHHHHHHhCCCCCCceEeec
Q 018618          118 GVPRKPG---MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV-------PIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       118 g~~~~~g---~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t-------~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      +.....+   ......+..|+....++++.+++.....+|...|.-+.--.       .+ .+  .....+.+...+|.+
T Consensus        94 a~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~-~E--~~~~p~~p~s~Yg~s  170 (370)
T PLN02695         94 ADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSL-KE--SDAWPAEPQDAYGLE  170 (370)
T ss_pred             cccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCc-Cc--ccCCCCCCCCHHHHH
Confidence            6432111   12233457899999999999987765544433332111100       00 00  000023345567776


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      .....++-..+++..|++..-++ ..++|.++
T Consensus       171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~  202 (370)
T PLN02695        171 KLATEELCKHYTKDFGIECRIGRFHNIYGPFG  202 (370)
T ss_pred             HHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence            66666665556777787655553 55778654

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=98.07  E-value=7.4e-05  Score=70.34  Aligned_cols=163  Identities=15%  Similarity=0.088  Sum_probs=107.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCC-CCeEEEEeCCCchhhhh--CCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDT-GAVVRGFLGQPQLENAL--TGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al--~~ADiVIi~a  117 (353)
                      |+|.|+|++|+||||.+..|++.|+  +++.+|... -...+.+-....+ ..++..   ..-+.+.|  ..-|.||..|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~--~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D---~~~L~~vf~~~~idaViHFA   75 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGH--EVVVLDNLSNGHKIALLKLQFKFYEGDLLD---RALLTAVFEENKIDAVVHFA   75 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCC--eEEEEecCCCCCHHHhhhccCceEEecccc---HHHHHHHHHhcCCCEEEECc
Confidence            6899999999999999999999999  999999865 1112211111111 011111   01112222  4789999998


Q ss_pred             CCCCCCCC---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe-----cCCCCchhHHHHHHHHHhCCCCCCceEeechh
Q 018618          118 GVPRKPGM---TRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-----SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  189 (353)
Q Consensus       118 g~~~~~g~---~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-----tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~l  189 (353)
                      +...- |+   .-..+...|+-....+.+.+.+.+.+-+|.-.     ++|..+-  +     ....-..|.+.+|-|.|
T Consensus        76 a~~~V-gESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~P--I-----~E~~~~~p~NPYG~sKl  147 (329)
T COG1087          76 ASISV-GESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSP--I-----SETSPLAPINPYGRSKL  147 (329)
T ss_pred             ccccc-chhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcc--c-----CCCCCCCCCCcchhHHH
Confidence            75422 22   36778899999999999999999977766543     3444311  1     12223457788999999


Q ss_pred             hHHHHHHHHHHHhCCCCCCC-cceEEeec
Q 018618          190 DVVRANTFVAEVLGLDPRDV-DVPVVGGH  217 (353)
Q Consensus       190 d~~R~~~~lA~~l~v~~~~v-~~~viG~h  217 (353)
                      ...++-+.+++..+.+..-+ ..-+.|-|
T Consensus       148 m~E~iL~d~~~a~~~~~v~LRYFN~aGA~  176 (329)
T COG1087         148 MSEEILRDAAKANPFKVVILRYFNVAGAC  176 (329)
T ss_pred             HHHHHHHHHHHhCCCcEEEEEecccccCC
Confidence            99999999999888654443 33455533

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=98.07  E-value=5.1e-05  Score=72.21  Aligned_cols=103  Identities=21%  Similarity=0.301  Sum_probs=66.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHH--------HHHhcCC-CC-----CeEEEEeCCCchhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVT--------ADISHMD-TG-----AVVRGFLGQPQLENA  106 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~--------~dl~~~~-~~-----~~v~~~~~t~d~~~a  106 (353)
                      .||+|||+ |.+|+.+|..++..|+  +|+++|.++ ....+        .++.... ..     ..+.....+++. ++
T Consensus         5 ~~V~vIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~   80 (295)
T PLN02545          5 KKVGVVGA-GQMGSGIAQLAAAAGM--DVWLLDSDPAALSRGLDSISSSLARLVKKGKMSQEEADATLGRIRCTTNL-EE   80 (295)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceEeeCCH-HH
Confidence            58999999 9999999999999887  999999976 11111        1122111 00     011111123454 67


Q ss_pred             hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCch
Q 018618          107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  164 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~  164 (353)
                      +++||+||.+.              .++.++...+...+.+++ |+++|  +||-+.+-
T Consensus        81 ~~~aD~Vieav--------------~e~~~~k~~v~~~l~~~~~~~~il--~s~tS~i~  123 (295)
T PLN02545         81 LRDADFIIEAI--------------VESEDLKKKLFSELDRICKPSAIL--ASNTSSIS  123 (295)
T ss_pred             hCCCCEEEEcC--------------ccCHHHHHHHHHHHHhhCCCCcEE--EECCCCCC
Confidence            89999999985              445566677777788776 45643  46665543

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=98.06  E-value=3.5e-05  Score=78.71  Aligned_cols=103  Identities=15%  Similarity=0.115  Sum_probs=69.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHH-------HHh---cCCC--CCeEEEEeCCCchhhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTA-------DIS---HMDT--GAVVRGFLGQPQLENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~-------dl~---~~~~--~~~v~~~~~t~d~~~al  107 (353)
                      +||+|||+ |.+|+.+|..|+..|+  +|.++|+++.  .....       .+.   ....  ...++.   ++++++++
T Consensus         5 ~kIavIG~-G~MG~~iA~~la~~G~--~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~---~~~~~ea~   78 (495)
T PRK07531          5 MKAACIGG-GVIGGGWAARFLLAGI--DVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTF---CASLAEAV   78 (495)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEe---eCCHHHHh
Confidence            58999999 9999999999999998  9999999861  11100       011   0000  012332   35777889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchh
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV  165 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t  165 (353)
                      ++||+|+.+.              .++.++.+.+...+.++++... ++.||.+.+..
T Consensus        79 ~~aD~Vieav--------------pe~~~vk~~l~~~l~~~~~~~~-iI~SsTsgi~~  121 (495)
T PRK07531         79 AGADWIQESV--------------PERLDLKRRVLAEIDAAARPDA-LIGSSTSGFLP  121 (495)
T ss_pred             cCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCc-EEEEcCCCCCH
Confidence            9999999984              3345556667777887775443 44677766553

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=97.99  E-value=7.7e-05  Score=66.97  Aligned_cols=97  Identities=20%  Similarity=0.305  Sum_probs=65.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      +|+++|+|+ |++|+.++..+...|+  ||.+-..+..+..+......  .+.++.    ...++|.+.||+||.+.  |
T Consensus         1 m~~~~i~Gt-GniG~alA~~~a~ag~--eV~igs~r~~~~~~a~a~~l--~~~i~~----~~~~dA~~~aDVVvLAV--P   69 (211)
T COG2085           1 MMIIAIIGT-GNIGSALALRLAKAGH--EVIIGSSRGPKALAAAAAAL--GPLITG----GSNEDAAALADVVVLAV--P   69 (211)
T ss_pred             CcEEEEecc-ChHHHHHHHHHHhCCC--eEEEecCCChhHHHHHHHhh--cccccc----CChHHHHhcCCEEEEec--c
Confidence            578999998 9999999999999998  88887666532222211111  233443    23468999999999984  3


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                                    .+.+.++.+.++..-.+-+||-.|||.+
T Consensus        70 --------------~~a~~~v~~~l~~~~~~KIvID~tnp~~   97 (211)
T COG2085          70 --------------FEAIPDVLAELRDALGGKIVIDATNPIE   97 (211)
T ss_pred             --------------HHHHHhHHHHHHHHhCCeEEEecCCCcc
Confidence                          2224455555554444678888899964

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=97.97  E-value=7.5e-05  Score=72.36  Aligned_cols=164  Identities=15%  Similarity=0.098  Sum_probs=93.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-----CchhhhhCCCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-----PQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-----~d~~~al~~ADiVI  114 (353)
                      +|||.|+||+|++|++++..|+.. ++  +|+.+|.....  ..++...   ..++.+...     ..+.++++++|+||
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~--~V~~~~r~~~~--~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~d~Vi   73 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDW--EVYGMDMQTDR--LGDLVNH---PRMHFFEGDITINKEWIEYHVKKCDVIL   73 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCC--eEEEEeCcHHH--HHHhccC---CCeEEEeCCCCCCHHHHHHHHcCCCEEE
Confidence            369999999999999999999875 56  89999964311  1122111   123322211     12335678999999


Q ss_pred             EcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCch---hHHHHHHHHHhCC------CCCCc
Q 018618          115 IPAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNST---VPIAAEVFKKAGT------YDPKK  182 (353)
Q Consensus       115 i~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~---t~~~~~~~~~~~~------~~~~k  182 (353)
                      ++++...  ....+.......|+....++++.+++..  ..+|.+|.. +...   .++ .+   ..+-      .++..
T Consensus        74 H~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~-~e---e~~~~~~~~~~~p~~  147 (347)
T PRK11908         74 PLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEF-DP---EASPLVYGPINKPRW  147 (347)
T ss_pred             ECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCc-Cc---cccccccCcCCCccc
Confidence            9887532  2223344556778898899999988764  355555432 1000   000 00   0000      01223


Q ss_pred             eEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          183 LLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       183 viG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      .+|.+.....++-..+++..|++..-++ +.++|.+
T Consensus       148 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~  183 (347)
T PRK11908        148 IYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPG  183 (347)
T ss_pred             hHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCC
Confidence            5666555554555556666777665554 4577753

>CHL00194 ycf39 Ycf39; Provisional

Probab=97.96  E-value=4.7e-05  Score=72.96  Aligned_cols=107  Identities=13%  Similarity=0.071  Sum_probs=70.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCe-EEE-EeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~-v~~-~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||.|+||+|++|++++..|.+.|+  +|+.++++....  ..+.+..  .. +.. .....++.++++++|+||.+++.
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~--~V~~l~R~~~~~--~~l~~~~--v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~   74 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGY--QVRCLVRNLRKA--SFLKEWG--AELVYGDLSLPETLPPSFKGVTAIIDASTS   74 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcChHHh--hhHhhcC--CEEEECCCCCHHHHHHHHCCCCEEEECCCC
Confidence            6999999999999999999999887  899998764211  1122111  11 111 11123567889999999998653


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..   ....++...|.....++++.+++.+-. .+|.+|
T Consensus        75 ~~---~~~~~~~~~~~~~~~~l~~aa~~~gvk-r~I~~S  109 (317)
T CHL00194         75 RP---SDLYNAKQIDWDGKLALIEAAKAAKIK-RFIFFS  109 (317)
T ss_pred             CC---CCccchhhhhHHHHHHHHHHHHHcCCC-EEEEec
Confidence            21   112234567888888999998887644 344444

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=97.94  E-value=9.2e-05  Score=73.30  Aligned_cols=112  Identities=19%  Similarity=0.253  Sum_probs=67.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--------------CCCeEEEEeCCCchhhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQLENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--------------~~~~v~~~~~t~d~~~al  107 (353)
                      |||+|||. |+||..+|..++. |+  +|+.+|+++.+  +..+....              ....+.   .+++.+++.
T Consensus         1 mkI~VIGl-GyvGl~~A~~lA~-G~--~VigvD~d~~k--v~~l~~g~~~~~e~~l~~~l~~~~~~l~---~t~~~~~~~   71 (388)
T PRK15057          1 MKITISGT-GYVGLSNGLLIAQ-NH--EVVALDILPSR--VAMLNDRISPIVDKEIQQFLQSDKIHFN---ATLDKNEAY   71 (388)
T ss_pred             CEEEEECC-CHHHHHHHHHHHh-CC--cEEEEECCHHH--HHHHHcCCCCCCCcCHHHHHHhCCCcEE---Eecchhhhh
Confidence            69999999 9999999987775 76  99999998621  11222210              011222   235566788


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCchhHH
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVPI  167 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv~~~t~~  167 (353)
                      ++||+||++...|......     .-++..+.+.++.+.+..|+.+|++- |-|....-.+
T Consensus        72 ~~ad~vii~Vpt~~~~k~~-----~~dl~~v~~v~~~i~~~~~g~lVV~~STv~pgtt~~l  127 (388)
T PRK15057         72 RDADYVIIATPTDYDPKTN-----YFNTSSVESVIKDVVEINPYAVMVIKSTVPVGFTAAM  127 (388)
T ss_pred             cCCCEEEEeCCCCCccCCC-----CcChHHHHHHHHHHHhcCCCCEEEEeeecCCchHHHH
Confidence            9999999997665322111     12233444555555544455555443 5777655444

>PLN02214 cinnamoyl-CoA reductase

Probab=97.94  E-value=0.00017  Score=70.01  Aligned_cols=169  Identities=15%  Similarity=0.043  Sum_probs=97.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HH-HHHHHhcCCCCCeEEEEe----CCCchhhhhCCCcEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PG-VTADISHMDTGAVVRGFL----GQPQLENALTGMDLV  113 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~-~~~dl~~~~~~~~v~~~~----~t~d~~~al~~ADiV  113 (353)
                      .++|.|+||+|++|++++..|++.|+  +|+.++++..  .. ....+...  ...+..+.    ...++.++++++|+|
T Consensus        10 ~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~V   85 (342)
T PLN02214         10 GKTVCVTGAGGYIASWIVKILLERGY--TVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAIDGCDGV   85 (342)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHhcCCEE
Confidence            45899999999999999999999987  8888887542  11 11122211  11222221    123466788999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC--CCchh-----HHHHHHHHHhC--CCCCCceE
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP--VNSTV-----PIAAEVFKKAG--TYDPKKLL  184 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP--v~~~t-----~~~~~~~~~~~--~~~~~kvi  184 (353)
                      |++++...   ....+.+..|+.....+++.+.+.... .++++|.-  +....     ..+.+-.+...  -..+...+
T Consensus        86 ih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~-r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y  161 (342)
T PLN02214         86 FHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVK-RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWY  161 (342)
T ss_pred             EEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHH
Confidence            99987542   234566788999999999999877544 34443321  11000     00000000000  00122345


Q ss_pred             eechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          185 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      |.+.....++-..+++..|++..-++ ..|+|.+
T Consensus       162 ~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        162 CYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPP  195 (342)
T ss_pred             HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCC
Confidence            55555555565566666677655553 5678864

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=97.93  E-value=0.00021  Score=69.33  Aligned_cols=176  Identities=16%  Similarity=0.096  Sum_probs=98.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE----eCCCchhhhhCC--CcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENALTG--MDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~~--ADiVIi  115 (353)
                      +||.|+||+|++|++++..|...|. ..++++|.....+....+.+......+...    ....++++++++  .|+||+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih   80 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETS-DAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH   80 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCC-CEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence            5899999999999999999998875 246677764321111112211001112211    111234455663  899999


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhC-------CC-cEEEEecCC-CCchhHHHHHHHHHhCCCCCCceE
Q 018618          116 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCC-------PN-ATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLL  184 (353)
Q Consensus       116 ~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kvi  184 (353)
                      ++|.....  ..........|+.....+++.+.++.       +. ..++.+|.. +.....-....+.......+...+
T Consensus        81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y  160 (355)
T PRK10217         81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY  160 (355)
T ss_pred             CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChh
Confidence            99864321  12345677889999999999988752       12 245544432 111000000000011123344557


Q ss_pred             eechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          185 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      |.+.+...++-..+++..+++..-++ ..++|.+.
T Consensus       161 ~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~  195 (355)
T PRK10217        161 SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH  195 (355)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence            77777777777777888887665553 56777653

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.92  E-value=0.00019  Score=71.56  Aligned_cols=117  Identities=25%  Similarity=0.318  Sum_probs=72.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--C--------------CCeEEEEeCCCchhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQLEN  105 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--~--------------~~~v~~~~~t~d~~~  105 (353)
                      |||+|||. |.+|..+|..|+..|+  +|+++|+++.+  +.++....  .              ...++.   ++++.+
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~--~V~~~d~~~~~--v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~---~~~~~~   72 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGH--EVTGVDIDQEK--VDKLNKGKSPIYEPGLDELLAKALAAGRLRA---TTDYED   72 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCC--eEEEEECCHHH--HHHhhcCCCCCCCCCHHHHHHHhhhcCCeEE---ECCHHH
Confidence            68999999 9999999999999998  89999997622  12222211  0              012332   356777


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhHHHHHHH
Q 018618          106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVF  172 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~~~~~~~  172 (353)
                      ++++||+||++.+.|.....      .-+...+.+.++.+.++. ++.+|++. |-|......+...++
T Consensus        73 ~~~~advvii~vpt~~~~~~------~~d~~~v~~~~~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~  135 (411)
T TIGR03026        73 AIRDADVIIICVPTPLKEDG------SPDLSYVESAAETIAKHLRKGATVVLESTVPPGTTEEVVKPIL  135 (411)
T ss_pred             HHhhCCEEEEEeCCCCCCCC------CcChHHHHHHHHHHHHhcCCCCEEEEeCcCCCCchHHHHHHHH
Confidence            89999999999876643221      112333445555555543 45555544 355555444433333

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=97.92  E-value=2.5e-05  Score=61.32  Aligned_cols=94  Identities=20%  Similarity=0.213  Sum_probs=61.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEE-eCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINP-LVSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~-D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      ||+|||+ |++|++++..|...+ ...+|.++ ++++.  ...++.... .  +..+  +.+..+++++||+||++.-..
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~--~~~~~~~~~-~--~~~~--~~~~~~~~~~advvilav~p~   72 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPE--KAAELAKEY-G--VQAT--ADDNEEAAQEADVVILAVKPQ   72 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHH--HHHHHHHHC-T--TEEE--SEEHHHHHHHTSEEEE-S-GG
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHH--HHHHHHHhh-c--cccc--cCChHHhhccCCEEEEEECHH
Confidence            7999998 999999999999888 23488866 87652  222232111 1  1221  124578899999999985211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                                      .+.++++.+....++..+|-++||
T Consensus        73 ----------------~~~~v~~~i~~~~~~~~vis~~ag   96 (96)
T PF03807_consen   73 ----------------QLPEVLSEIPHLLKGKLVISIAAG   96 (96)
T ss_dssp             ----------------GHHHHHHHHHHHHTTSEEEEESTT
T ss_pred             ----------------HHHHHHHHHhhccCCCEEEEeCCC
Confidence                            255677777445578888777775

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=97.91  E-value=9.4e-05  Score=69.85  Aligned_cols=168  Identities=18%  Similarity=0.127  Sum_probs=98.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCC-cEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM-DLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~A-DiVIi~ag~~  120 (353)
                      |+|.|+||+|++|++++..|.+.|+  +|+.+|.........+ .+... ...... ......+++++. |.||++++..
T Consensus         1 ~~ILVtG~tGfiG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~-~~~~~-~~~d~~-~~~~~~~~~~~~~d~vih~aa~~   75 (314)
T COG0451           1 MRILVTGGAGFIGSHLVERLLAAGH--DVRGLDRLRDGLDPLL-SGVEF-VVLDLT-DRDLVDELAKGVPDAVIHLAAQS   75 (314)
T ss_pred             CeEEEEcCcccHHHHHHHHHHhCCC--eEEEEeCCCccccccc-cccce-eeeccc-chHHHHHHHhcCCCEEEEccccC
Confidence            3599999999999999999999988  9999998652111111 11110 001100 012234556677 9999998866


Q ss_pred             CCCCCCH---HHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC-CCCchh---HHHHHHHHHh-CCCCCCceEeechhhHH
Q 018618          121 RKPGMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV---PIAAEVFKKA-GTYDPKKLLGVTMLDVV  192 (353)
Q Consensus       121 ~~~g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN-Pv~~~t---~~~~~~~~~~-~~~~~~kviG~t~ld~~  192 (353)
                      ..++..+   .++...|+...+++++..++ +.-..++..|. .+..-.   ..+.    .. ....|...+|.+.+...
T Consensus        76 ~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~ss~~~~~~~~~~~~~~----E~~~~~~p~~~Yg~sK~~~E  150 (314)
T COG0451          76 SVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFASSVSVVYGDPPPLPID----EDLGPPRPLNPYGVSKLAAE  150 (314)
T ss_pred             chhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCCCceECCCCCCCCcc----cccCCCCCCCHHHHHHHHHH
Confidence            5444322   35789999999999999998 33333443322 111100   0001    11 11112224677766666


Q ss_pred             HHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018618          193 RANTFVAEVLGLDPRDVD-VPVVGGHAG  219 (353)
Q Consensus       193 R~~~~lA~~l~v~~~~v~-~~viG~hg~  219 (353)
                      +.-...++..+++..-++ +.++|....
T Consensus       151 ~~~~~~~~~~~~~~~ilR~~~vyGp~~~  178 (314)
T COG0451         151 QLLRAYARLYGLPVVILRPFNVYGPGDK  178 (314)
T ss_pred             HHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence            665666666677777775 468886544

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=97.91  E-value=0.00014  Score=70.37  Aligned_cols=176  Identities=15%  Similarity=0.109  Sum_probs=99.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE----eCCCchhhhhC--CCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENALT--GMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~--~ADiVIi  115 (353)
                      |||.|+||+|++|++++..|+..|.. .++.+|.....+....+........+..+    ....++.++++  ++|+||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   79 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQD-SVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMH   79 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCC-eEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEE
Confidence            68999999999999999999888752 46667754311111111111001112211    11123445565  4799999


Q ss_pred             cCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhC-------CC-cEEEEecCC-CCchhHHHH--------HHHHHhC
Q 018618          116 PAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCC-------PN-ATVNLISNP-VNSTVPIAA--------EVFKKAG  176 (353)
Q Consensus       116 ~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~-------p~-a~viv~tNP-v~~~t~~~~--------~~~~~~~  176 (353)
                      +|+....  ......+++..|+.....+++.+.++.       .. ..++.+|-. +......--        ..+....
T Consensus        80 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~  159 (352)
T PRK10084         80 LAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT  159 (352)
T ss_pred             CCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence            9986421  112345678899999999999998752       12 244444332 111000000        0000111


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      .+.+...+|.+.....++-..+++.+|++...++ ..|+|.+.
T Consensus       160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~  202 (352)
T PRK10084        160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH  202 (352)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence            2345567888777777776777888887765554 55778653

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=97.90  E-value=0.0001  Score=70.11  Aligned_cols=111  Identities=18%  Similarity=0.215  Sum_probs=73.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      |||.|+||+|++|++++..|...|.  +|+++|++.....  ++.+... ..+.. .....++.++++++|+||..++..
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~-~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~   75 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGE--EVRVLVRPTSDRR--NLEGLDV-EIVEGDLRDPASLRKAVAGCRALFHVAADY   75 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCC--EEEEEEecCcccc--ccccCCc-eEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence            5899999999999999999999887  8999998652111  1111110 11111 111134567788999999988643


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      .....+..+....|+.....+++.+.+..-. .+++.|
T Consensus        76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  112 (328)
T TIGR03466        76 RLWAPDPEEMYAANVEGTRNLLRAALEAGVE-RVVYTS  112 (328)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence            2223445667788999999999988876533 344444

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.87  E-value=0.00042  Score=73.30  Aligned_cols=181  Identities=15%  Similarity=0.027  Sum_probs=99.3

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-Cc---hhhhh--CCCc
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ---LENAL--TGMD  111 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~d---~~~al--~~AD  111 (353)
                      +-+++||.|+||+|++|++++..|.+.+...+|+.+|..........+........++.+... +|   +...+  .++|
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D   82 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGID   82 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCC
Confidence            345689999999999999999999887433389999975311111111111111233332211 22   22222  6899


Q ss_pred             EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHH-HHHHHhCCCCCCceEeec
Q 018618          112 LVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAA-EVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       112 iVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~-~~~~~~~~~~~~kviG~t  187 (353)
                      +||++|+......  ....++...|+.....+++.+++.+.-..+|.+|.- +.-...--. ..........|...+|.+
T Consensus        83 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~s  162 (668)
T PLN02260         83 TIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSAT  162 (668)
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHH
Confidence            9999988643211  123456788999999999999887633345554431 100000000 000000112233456766


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      .+...++-..+++..+++..-++ ..|+|.+.
T Consensus       163 K~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~  194 (668)
T PLN02260        163 KAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ  194 (668)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence            66666665556666677654444 55777553

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=97.85  E-value=0.00044  Score=66.14  Aligned_cols=175  Identities=17%  Similarity=0.068  Sum_probs=97.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhc-CCCCCeEEEE----eCCCchhhhhCCCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISH-MDTGAVVRGF----LGQPQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~-~~~~~~v~~~----~~t~d~~~al~~ADiVI  114 (353)
                      .++|.|+||+|++|++++..|+..|+  +|++++++... .....+.. ......+..+    ....++++++++.|+||
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   82 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGY--TINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF   82 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence            35899999999999999999999988  88877765421 11111111 1111222222    11234567788999999


Q ss_pred             EcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHH---H-HHHHHHhCCC------CCCc
Q 018618          115 IPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPI---A-AEVFKKAGTY------DPKK  182 (353)
Q Consensus       115 i~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~---~-~~~~~~~~~~------~~~k  182 (353)
                      +++|..... . ......+..|+.....+.+.+.++.....++++|.-.......   . ...+....-.      ++..
T Consensus        83 h~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~  162 (325)
T PLN02989         83 HTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQ  162 (325)
T ss_pred             EeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccccc
Confidence            999853211 1 1234567889999999999988754223444443211100000   0 0000000001      1124


Q ss_pred             eEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          183 LLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       183 viG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      .+|.+.+...++-..+++..|++..-++ +.++|..
T Consensus       163 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~  198 (325)
T PLN02989        163 WYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPI  198 (325)
T ss_pred             chHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCC
Confidence            5677666666666666777777655443 5567754

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=97.84  E-value=9.9e-05  Score=70.66  Aligned_cols=117  Identities=21%  Similarity=0.375  Sum_probs=78.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc--CC--CC------CeEEEEeCCCchhhhhCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH--MD--TG------AVVRGFLGQPQLENALTGM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~--~~--~~------~~v~~~~~t~d~~~al~~A  110 (353)
                      ++||+|+|+ |.-|.++|..|+.+++  ++.|..+++  ..+.++..  ..  +.      +.+.   .++|+.+++++|
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~--~V~lw~r~~--~~~~~i~~~~~N~~yLp~i~lp~~l~---at~Dl~~a~~~a   72 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGH--EVRLWGRDE--EIVAEINETRENPKYLPGILLPPNLK---ATTDLAEALDGA   72 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCC--eeEEEecCH--HHHHHHHhcCcCccccCCccCCcccc---cccCHHHHHhcC
Confidence            479999999 9999999999999997  899999876  22223332  22  11      2233   367999999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec---CCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS---NPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t---NPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |+||+..  |              .+.++++++++..+- ++..++.+|   +|-..  .++++++++.  +|.++ ++.
T Consensus        73 d~iv~av--P--------------s~~~r~v~~~l~~~l~~~~~iv~~sKGie~~t~--~l~seii~e~--l~~~~-~~v  131 (329)
T COG0240          73 DIIVIAV--P--------------SQALREVLRQLKPLLLKDAIIVSATKGLEPETG--RLLSEIIEEE--LPDNP-IAV  131 (329)
T ss_pred             CEEEEEC--C--------------hHHHHHHHHHHhhhccCCCeEEEEeccccCCCc--chHHHHHHHH--cCCCe-EEE
Confidence            9999974  3              344677777776444 677777776   34321  2235555554  34444 444

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=97.83  E-value=0.00035  Score=67.54  Aligned_cols=160  Identities=13%  Similarity=0.031  Sum_probs=91.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHh-cCC--CCCeEEEEeC----CCchhhhhCC--
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADIS-HMD--TGAVVRGFLG----QPQLENALTG--  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~-~~~--~~~~v~~~~~----t~d~~~al~~--  109 (353)
                      +||.|+||+|++|++++..|+..|.  +|+++|++..   ......+. +..  ....+..+..    ...+.+++++  
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   78 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGY--EVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIK   78 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCC--EEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCC
Confidence            4899999999999999999999988  9999997641   11111111 000  0112222211    1234455664  


Q ss_pred             CcEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHhhC-CC-cEEEEecC-CCCchhHHHHHHHHHhCCCCCCceE
Q 018618          110 MDLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCC-PN-ATVNLISN-PVNSTVPIAAEVFKKAGTYDPKKLL  184 (353)
Q Consensus       110 ADiVIi~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~-p~-a~viv~tN-Pv~~~t~~~~~~~~~~~~~~~~kvi  184 (353)
                      .|+||++|+..... . .........|+.....+++.+.+.+ .. ..++.+|. -+.--..-.  .......+.|...+
T Consensus        79 ~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~--~~~E~~~~~p~~~Y  156 (343)
T TIGR01472        79 PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEI--PQNETTPFYPRSPY  156 (343)
T ss_pred             CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCC--CCCCCCCCCCCChh
Confidence            59999999864321 1 1233445668888889999988765 32 34444332 111000000  00011223455667


Q ss_pred             eechhhHHHHHHHHHHHhCCC
Q 018618          185 GVTMLDVVRANTFVAEVLGLD  205 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~v~  205 (353)
                      |.+.+...++-..+++.++++
T Consensus       157 ~~sK~~~e~~~~~~~~~~~~~  177 (343)
T TIGR01472       157 AAAKLYAHWITVNYREAYGLF  177 (343)
T ss_pred             HHHHHHHHHHHHHHHHHhCCc
Confidence            877777777777777777765

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02572 UDP-sulfoquinovose synthase

Probab=97.83  E-value=0.00024  Score=71.62  Aligned_cols=176  Identities=14%  Similarity=0.115  Sum_probs=100.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHH------------HHHHH---hcCCCCCeEEEEeC--
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPG------------VTADI---SHMDTGAVVRGFLG--   99 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~------------~~~dl---~~~~~~~~v~~~~~--   99 (353)
                      +.+||.|+||+|++|++++..|+..|.  +|+++|...   ...            ....+   .+.. ...++.+..  
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~~v~~Dl  122 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGY--EVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVS-GKEIELYVGDI  122 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeccccccccccccccccccccchHHHHHHHHHhh-CCcceEEECCC
Confidence            357899999999999999999999987  899998422   000            00011   1000 011222211  


Q ss_pred             --CCchhhhhC--CCcEEEEcCCCCCCC-CC-C---HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCc-----h
Q 018618          100 --QPQLENALT--GMDLVIIPAGVPRKP-GM-T---RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNS-----T  164 (353)
Q Consensus       100 --t~d~~~al~--~ADiVIi~ag~~~~~-g~-~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~-----~  164 (353)
                        ..+++++++  ++|+||++|+....+ .. +   ....+..|+....++++.+++++....++.+| .-+..     +
T Consensus       123 ~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~~~~  202 (442)
T PLN02572        123 CDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPNIDI  202 (442)
T ss_pred             CCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCCCCC
Confidence              123445565  489999998653211 11 1   12345689999999999999887654454433 21110     0


Q ss_pred             h--HH-HHHHHHHh---CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          165 V--PI-AAEVFKKA---GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       165 t--~~-~~~~~~~~---~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      .  ++ ..+.....   .-..|...+|.+.+....+...+++..|++..-++ +.++|.+.
T Consensus       203 ~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        203 EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence            0  00 00000000   01234467898877766777778888888766664 66888653

>PLN02778 3,5-epimerase/4-reductase

Probab=97.82  E-value=0.00033  Score=66.76  Aligned_cols=90  Identities=22%  Similarity=0.164  Sum_probs=62.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh--CCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al--~~ADiVIi~a  117 (353)
                      ..|||.|+||+|++|++++..|...|+  ++++...+...     ..               .+..++  .++|+||++|
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~--~V~~~~~~~~~-----~~---------------~v~~~l~~~~~D~ViH~A   65 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGI--DFHYGSGRLEN-----RA---------------SLEADIDAVKPTHVFNAA   65 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCC--EEEEecCccCC-----HH---------------HHHHHHHhcCCCEEEECC
Confidence            458999999999999999999998887  76644321100     00               011122  2689999999


Q ss_pred             CCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhhCCC
Q 018618          118 GVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN  151 (353)
Q Consensus       118 g~~~~~g-----~~r~~~~~~N~~i~~~i~~~i~~~~p~  151 (353)
                      +....+.     ....+....|+....++++.+++.+..
T Consensus        66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~  104 (298)
T PLN02778         66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV  104 (298)
T ss_pred             cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            8643222     235677889999999999999987543

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=97.82  E-value=0.00021  Score=68.60  Aligned_cols=114  Identities=18%  Similarity=0.198  Sum_probs=70.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC-CCCe-EEE-EeCCCchhhhhC--CCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAV-VRG-FLGQPQLENALT--GMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~-~~~~-v~~-~~~t~d~~~al~--~ADiVI  114 (353)
                      |||.|+||+|++|++++..|+..|.  +|+++|...  .......+.+.. .... +.. ......+.++++  ++|+||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv   78 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI   78 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCC--eEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence            6899999999999999999998887  889998643  111111122111 0111 111 111112334454  689999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ++++.....  .....+.+..|+.....+++.+++.... .++.+|
T Consensus        79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  123 (338)
T PRK10675         79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NLIFSS  123 (338)
T ss_pred             ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence            998754311  1234567889999999999998876433 344444

>PRK06194 hypothetical protein; Provisional

Probab=97.81  E-value=0.00031  Score=65.91  Aligned_cols=158  Identities=19%  Similarity=0.138  Sum_probs=90.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~-------  108 (353)
                      ++|.|+||+|++|++++..|+..|.  +|+++|.+.  ......++...  ...+..+.. -+|   ++++++       
T Consensus         7 k~vlVtGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          7 KVAVITGAASGFGLAFARIGAALGM--KLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999987  899999875  23333334322  123322211 122   223333       


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCC-----cEEEEecCCCCchhHHHHHHHH
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPN-----ATVNLISNPVNSTVPIAAEVFK  173 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~-----a~viv~tNPv~~~t~~~~~~~~  173 (353)
                      ..|+||..+|.....   ..+.   ...+..|+.....+++.    +.+.+..     +.++++|.-....         
T Consensus        83 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~---------  153 (287)
T PRK06194         83 AVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLL---------  153 (287)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc---------
Confidence            469999999864321   1222   23355665555444444    5544432     4555554422111         


Q ss_pred             HhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          174 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       174 ~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                         +.+..-.++.+......+...+++.++.....+++..+.
T Consensus       154 ---~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~  192 (287)
T PRK06194        154 ---APPAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLC  192 (287)
T ss_pred             ---CCCCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEE
Confidence               223334566665555566677777777665566655544

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=97.78  E-value=0.00025  Score=68.01  Aligned_cols=100  Identities=22%  Similarity=0.342  Sum_probs=64.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCC------CCCeEEEEeCCCchhhhhCCCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMD------TGAVVRGFLGQPQLENALTGMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~------~~~~v~~~~~t~d~~~al~~ADi  112 (353)
                      +|||+|||+ |.+|+.++..|+..|+  ++.++|+++..  ....+..+..      ....+..   +++.+++++++|+
T Consensus         1 mmkI~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~   74 (325)
T PRK00094          1 MMKIAVLGA-GSWGTALAIVLARNGH--DVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRA---TTDLAEALADADL   74 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEE---eCCHHHHHhCCCE
Confidence            479999999 9999999999999888  89999987521  1111100100      0012222   2466678899999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          113 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       113 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      ||++...                ..+.++++.+..+. |+.+++..+|-++
T Consensus        75 vi~~v~~----------------~~~~~v~~~l~~~~~~~~~vi~~~ngv~  109 (325)
T PRK00094         75 ILVAVPS----------------QALREVLKQLKPLLPPDAPIVWATKGIE  109 (325)
T ss_pred             EEEeCCH----------------HHHHHHHHHHHhhcCCCCEEEEEeeccc
Confidence            9998521                12445555666554 6777887876654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=97.78  E-value=0.00025  Score=68.91  Aligned_cols=173  Identities=17%  Similarity=0.093  Sum_probs=96.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH--HHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLG----QPQLENALTGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiV  113 (353)
                      ..|||.|+||+|++|++++..|++.|.  +|++++.+....  ...++..   ...+..+..    ..++++++++.|+|
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~d~V   83 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGY--TVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVKGCDGV   83 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHcCCCEE
Confidence            357999999999999999999999887  888887654211  1112221   122332211    12345667889999


Q ss_pred             EEcCCCCCCC---C-CCHH-----HHHHHHHHHHHHHHHHHHhhCCCcEEEEecC-CCCchh-------HHHHHH----H
Q 018618          114 IIPAGVPRKP---G-MTRD-----DLFNINAGIVRTLCEGIAKCCPNATVNLISN-PVNSTV-------PIAAEV----F  172 (353)
Q Consensus       114 Ii~ag~~~~~---g-~~r~-----~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN-Pv~~~t-------~~~~~~----~  172 (353)
                      |++|+.....   . .+..     ..+..|+.....+++.+.++..-..++++|. -+....       ....+-    .
T Consensus        84 ih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~  163 (353)
T PLN02896         84 FHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPI  163 (353)
T ss_pred             EECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcH
Confidence            9998864211   1 1222     2334456778888888876632234554443 111000       000000    0


Q ss_pred             HH-hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          173 KK-AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       173 ~~-~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      .. ....++.-.+|.+.+...++-..+++..+++..-++ ..|+|.+
T Consensus       164 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~  210 (353)
T PLN02896        164 DHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPF  210 (353)
T ss_pred             HHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCC
Confidence            00 000112236777777777777777887777554443 4566754

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=97.78  E-value=0.0007  Score=64.76  Aligned_cols=105  Identities=14%  Similarity=0.078  Sum_probs=67.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcC-CCCCeEEEEe----CCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRGFL----GQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~-~~~~~v~~~~----~t~d~~~al~~ADiVIi  115 (353)
                      ++|.|+||+|++|++++..|+..|+  +|++...+. .......+... .....+..+.    ...++.++++++|+||+
T Consensus         6 ~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          6 KLVCVTGASGYIASWIVKLLLLRGY--TVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            5999999999999999999999887  777555443 21122222211 1112233221    12345677889999999


Q ss_pred             cCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhh
Q 018618          116 PAGVPRK-PGMTRDDLFNINAGIVRTLCEGIAKC  148 (353)
Q Consensus       116 ~ag~~~~-~g~~r~~~~~~N~~i~~~i~~~i~~~  148 (353)
                      +|+.... ......+++..|+.....+++.+.+.
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~  117 (322)
T PLN02986         84 TASPVFFTVKDPQTELIDPALKGTINVLNTCKET  117 (322)
T ss_pred             eCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc
Confidence            9875321 11123345678999999999988765

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.77  E-value=0.00028  Score=72.67  Aligned_cols=116  Identities=14%  Similarity=0.089  Sum_probs=73.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcC-----C--CCCeEEEEe----CCCchhhh
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHM-----D--TGAVVRGFL----GQPQLENA  106 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~-----~--~~~~v~~~~----~t~d~~~a  106 (353)
                      ....|.|+||+|++|+.++..|+..|+  +|++++++..  ......+.+.     .  ....+..+.    ...+++++
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~--~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            345799999999999999999999887  8999988762  2222222110     0  001122221    11345567


Q ss_pred             hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +.++|+||+++|............+..|......+++.+.+..-. .||++|
T Consensus       157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVg-RIV~VS  207 (576)
T PLN03209        157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVN-HFILVT  207 (576)
T ss_pred             hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCC-EEEEEc
Confidence            899999999987653221222334567888888999988876543 444444

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.76  E-value=0.00027  Score=69.36  Aligned_cols=107  Identities=16%  Similarity=0.289  Sum_probs=71.0

Q ss_pred             hhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCC-----CcEEEEEeCCCc---HHHHHHHhcC--C--C---
Q 018618           26 SCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT---PGVTADISHM--D--T---   90 (353)
Q Consensus        26 ~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~-----~~el~L~D~~~~---~~~~~dl~~~--~--~---   90 (353)
                      ++|.+-.|++.      ||+|||+ |.-|+++|..|..++.     ..+|.|+.+++.   +..+.++++.  .  +   
T Consensus         2 ~~~~~~~~~~~------ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~   74 (365)
T PTZ00345          2 SLFQKLRCGPL------KVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPG   74 (365)
T ss_pred             cchhhcccCCC------eEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCC
Confidence            46666666665      9999999 9999999999998762     238888887762   2234444432  1  1   


Q ss_pred             ---CCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh--hC-CCcEEEEec
Q 018618           91 ---GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK--CC-PNATVNLIS  158 (353)
Q Consensus        91 ---~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~--~~-p~a~viv~t  158 (353)
                         +..+..   ++|+.+++++||+||++.  |              .+.++++++.++.  +- +++++|.++
T Consensus        75 ~~Lp~ni~~---tsdl~eav~~aDiIvlAV--P--------------sq~l~~vl~~l~~~~~l~~~~~iIS~a  129 (365)
T PTZ00345         75 IKLPDNIVA---VSDLKEAVEDADLLIFVI--P--------------HQFLESVLSQIKENNNLKKHARAISLT  129 (365)
T ss_pred             CcCCCceEE---ecCHHHHHhcCCEEEEEc--C--------------hHHHHHHHHHhccccccCCCCEEEEEe
Confidence               123443   467888999999999974  2              3346777777776  33 345565554

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=97.76  E-value=0.00058  Score=64.76  Aligned_cols=104  Identities=20%  Similarity=0.200  Sum_probs=63.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC-CCeEEE-EeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAVVRG-FLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-~~~v~~-~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||+|+|+ |.+|+.++..|.+.|.  +|.++|+++.......-..... ...... ....++.++ .+++|+||++...
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~vila~k~   76 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGH--DVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAE-LGPQDLVILAVKA   76 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhH-cCCCCEEEEeccc
Confidence            68999999 9999999999999887  9999998551111110011100 011111 011345444 4999999998532


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchh
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTV  165 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t  165 (353)
                      .                -+.++++.+..+ .++..|+...|.++...
T Consensus        77 ~----------------~~~~~~~~l~~~l~~~~~iv~~~nG~~~~~  107 (304)
T PRK06522         77 Y----------------QLPAALPSLAPLLGPDTPVLFLQNGVGHLE  107 (304)
T ss_pred             c----------------cHHHHHHHHhhhcCCCCEEEEecCCCCcHH
Confidence            1                134455555544 36678888889887654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.70  E-value=0.00047  Score=60.16  Aligned_cols=93  Identities=25%  Similarity=0.304  Sum_probs=65.4

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----CchhhhhCCCcEEEEcCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~ADiVIi~ag~  119 (353)
                      |+|+||+|++|+.++..|.+.+.  +|+++-+++.+..  +      ...++.+...    +++.++++++|.||.+.|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~--~V~~~~R~~~~~~--~------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~   70 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH--EVTALVRSPSKAE--D------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGP   70 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS--EEEEEESSGGGHH--H------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHS
T ss_pred             eEEECCCChHHHHHHHHHHHCCC--EEEEEecCchhcc--c------ccccccceeeehhhhhhhhhhhhcchhhhhhhh
Confidence            78999999999999999999996  9999988763211  1      1233332221    3457889999999999865


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +.+           ..+..+.+++.+++.... .++++|
T Consensus        71 ~~~-----------~~~~~~~~~~a~~~~~~~-~~v~~s   97 (183)
T PF13460_consen   71 PPK-----------DVDAAKNIIEAAKKAGVK-RVVYLS   97 (183)
T ss_dssp             TTT-----------HHHHHHHHHHHHHHTTSS-EEEEEE
T ss_pred             hcc-----------cccccccccccccccccc-cceeee
Confidence            533           177788888888876544 344433

...

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=97.70  E-value=0.00058  Score=64.93  Aligned_cols=119  Identities=12%  Similarity=0.144  Sum_probs=72.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC-----CCeEEE-EeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-----GAVVRG-FLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-----~~~v~~-~~~t~d~~~al~~ADiVIi  115 (353)
                      |||+|+|+ |.+|..++..|.+.|+  +|.++++ +..  ...+.+...     ...... ....++.+++.+++|+||+
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~--~V~~~~r-~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vil   74 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGR--DVTFLVR-PKR--AKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVIL   74 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCC--ceEEEec-HHH--HHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEE
Confidence            69999999 9999999999999887  8999998 411  111221110     011110 0012455555689999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe-echh
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG-VTML  189 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG-~t~l  189 (353)
                      +....                .+.++++.+..+- ++..|+.+.|.++....+     .+.  +|++++++ ++..
T Consensus        75 avk~~----------------~~~~~~~~l~~~~~~~~~ii~~~nG~~~~~~l-----~~~--~~~~~v~~g~~~~  127 (305)
T PRK12921         75 AVKAY----------------QLDAAIPDLKPLVGEDTVIIPLQNGIGQLEQL-----EPY--FGRERVLGGVVFI  127 (305)
T ss_pred             Eeccc----------------CHHHHHHHHHhhcCCCCEEEEeeCCCChHHHH-----HHh--CCcccEEEEEEEE
Confidence            85322                1344555555543 567777888988755322     222  56667774 4443

>PLN02583 cinnamoyl-CoA reductase

Probab=97.68  E-value=0.00091  Score=63.51  Aligned_cols=104  Identities=14%  Similarity=0.103  Sum_probs=68.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cH---HHHHHHhcCCCCCeEEEEe----CCCchhhhhCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TP---GVTADISHMDTGAVVRGFL----GQPQLENALTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~---~~~~dl~~~~~~~~v~~~~----~t~d~~~al~~ADiV  113 (353)
                      ++|+|+||+|++|++++..|++.|+  +|++++++. ..   ....++...  ...+..+.    ...++.+++.++|.|
T Consensus         7 k~vlVTGatG~IG~~lv~~Ll~~G~--~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~~~d~v   82 (297)
T PLN02583          7 KSVCVMDASGYVGFWLVKRLLSRGY--TVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALKGCSGL   82 (297)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHcCCCEE
Confidence            4799999999999999999999998  888887643 11   111222111  11222221    123456789999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      +..++.+........+++..|+.....+.+.+.+..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~  118 (297)
T PLN02583         83 FCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTD  118 (297)
T ss_pred             EEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            876543322111235677899999999999988763

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=97.66  E-value=0.00047  Score=66.76  Aligned_cols=101  Identities=21%  Similarity=0.225  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC------CCeE----EEEeCCCchhhhhCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------GAVV----RGFLGQPQLENALTGM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~------~~~v----~~~~~t~d~~~al~~A  110 (353)
                      +|||+|||+ |.+|+.++..|...|+  +|.++|+++..   ..+.....      ....    ..+..+++. ++++++
T Consensus         2 ~mkI~IiG~-G~mG~~~A~~L~~~G~--~V~~~~r~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   74 (341)
T PRK08229          2 MARICVLGA-GSIGCYLGGRLAAAGA--DVTLIGRARIG---DELRAHGLTLTDYRGRDVRVPPSAIAFSTDP-AALATA   74 (341)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhcCC--cEEEEecHHHH---HHHHhcCceeecCCCcceecccceeEeccCh-hhccCC
Confidence            479999999 9999999999999987  89999975411   11111100      0000    001113454 578999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCch
Q 018618          111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  164 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~  164 (353)
                      |+||++...+.                ..++++.+..+. ++.+|+..+|..+..
T Consensus        75 D~vil~vk~~~----------------~~~~~~~l~~~~~~~~iii~~~nG~~~~  113 (341)
T PRK08229         75 DLVLVTVKSAA----------------TADAAAALAGHARPGAVVVSFQNGVRNA  113 (341)
T ss_pred             CEEEEEecCcc----------------hHHHHHHHHhhCCCCCEEEEeCCCCCcH
Confidence            99999863221                123445555543 667777788887654

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=97.65  E-value=0.0003  Score=61.06  Aligned_cols=65  Identities=17%  Similarity=0.244  Sum_probs=46.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ++||++||. |.+|+.++..|...|+  +|+.||+++  ....++.+..    .+..   .++++++++||+|+.+.
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~--~v~~~d~~~--~~~~~~~~~g----~~~~---~s~~e~~~~~dvvi~~v   65 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGY--EVTVYDRSP--EKAEALAEAG----AEVA---DSPAEAAEQADVVILCV   65 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTT--EEEEEESSH--HHHHHHHHTT----EEEE---SSHHHHHHHBSEEEE-S
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCC--eEEeeccch--hhhhhhHHhh----hhhh---hhhhhHhhcccceEeec
Confidence            479999999 9999999999999998  999999865  2233344321    3332   45688999999999973

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=97.65  E-value=0.00067  Score=64.39  Aligned_cols=160  Identities=10%  Similarity=0.087  Sum_probs=87.7

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc-hhhhh-----CCCcEEEEcC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ-LENAL-----TGMDLVIIPA  117 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d-~~~al-----~~ADiVIi~a  117 (353)
                      |.|+||+|++|++++..|+..|+ ..+.++|..........+.+... .....   ..+ .+.++     .++|+||++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~-~~v~~~~~~~~~~~~~~~~~~~~-~d~~~---~~~~~~~~~~~~~~~~~d~Vih~A   76 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLDI-ADYMD---KEDFLAQIMAGDDFGDIEAIFHEG   76 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCC-ceEEEecCCCcchHHHhhhhhhh-hhhhh---HHHHHHHHhcccccCCccEEEECc
Confidence            78999999999999999998886 24667787541111011111110 00000   011 12222     3799999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC------CCchhHHHHHHHHHhCCCCCCceEeechhhH
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP------VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  191 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP------v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~  191 (353)
                      +.+.........+...|+....++.+.+.+...  .+|..|..      .+...       .......|...+|.+....
T Consensus        77 ~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~--~~i~~SS~~vyg~~~~~~~-------~E~~~~~p~~~Y~~sK~~~  147 (308)
T PRK11150         77 ACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTDDFI-------EEREYEKPLNVYGYSKFLF  147 (308)
T ss_pred             eecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEcchHHhCcCCCCCC-------ccCCCCCCCCHHHHHHHHH
Confidence            754333334445678899999999999987653  34444331      11000       0111122334566665544


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          192 VRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       192 ~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      .++-..+++..+++..-++ ..++|.+
T Consensus       148 E~~~~~~~~~~~~~~~~lR~~~vyG~~  174 (308)
T PRK11150        148 DEYVRQILPEANSQICGFRYFNVYGPR  174 (308)
T ss_pred             HHHHHHHHHHcCCCEEEEeeeeecCCC
Confidence            4444445555565544443 5677754

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.64  E-value=0.00043  Score=66.73  Aligned_cols=98  Identities=18%  Similarity=0.384  Sum_probs=64.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc----CC------CCCeEEEEeCCCchhhhh-CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH----MD------TGAVVRGFLGQPQLENAL-TGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~----~~------~~~~v~~~~~t~d~~~al-~~A  110 (353)
                      |||+|+|| |.+|+.++..|.+.|.  +|.++++++.  .+..+..    ..      ....++.   ++|.++++ .++
T Consensus         1 MkI~IiGa-Ga~G~ala~~L~~~g~--~V~l~~r~~~--~~~~i~~~~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~   72 (326)
T PRK14620          1 MKISILGA-GSFGTAIAIALSSKKI--SVNLWGRNHT--TFESINTKRKNLKYLPTCHLPDNISV---KSAIDEVLSDNA   72 (326)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEecCHH--HHHHHHHcCCCcccCCCCcCCCCeEE---eCCHHHHHhCCC
Confidence            68999999 9999999999999887  8999998652  2222221    11      1112333   34666666 589


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-h-CCCcEEEEecCCCCc
Q 018618          111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-C-CPNATVNLISNPVNS  163 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~-~p~a~viv~tNPv~~  163 (353)
                      |+||++..                ...+.++++.+.. + .++..++..+|=.+.
T Consensus        73 Dliiiavk----------------s~~~~~~l~~l~~~~l~~~~~vv~~~nGi~~  111 (326)
T PRK14620         73 TCIILAVP----------------TQQLRTICQQLQDCHLKKNTPILICSKGIEK  111 (326)
T ss_pred             CEEEEEeC----------------HHHHHHHHHHHHHhcCCCCCEEEEEEcCeeC
Confidence            99999852                1224555566654 3 367777777776643

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.63  E-value=0.00029  Score=65.86  Aligned_cols=98  Identities=21%  Similarity=0.253  Sum_probs=67.3

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKP  123 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~  123 (353)
                      |.|+||+|++|++++..|+..|+  +|+.++++......  +..    ..+..... .+..++++++|+||++++.+...
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~--~~~----~~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~   71 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGH--EVTILTRSPPAGAN--TKW----EGYKPWAP-LAESEALEGADAVINLAGEPIAD   71 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCC--EEEEEeCCCCCCCc--ccc----eeeecccc-cchhhhcCCCCEEEECCCCCccc
Confidence            57999999999999999998887  99999987621100  000    00111111 23457889999999999865432


Q ss_pred             C-C---CHHHHHHHHHHHHHHHHHHHHhhCC
Q 018618          124 G-M---TRDDLFNINAGIVRTLCEGIAKCCP  150 (353)
Q Consensus       124 g-~---~r~~~~~~N~~i~~~i~~~i~~~~p  150 (353)
                      + .   ....+...|+...+.+++.+++...
T Consensus        72 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~  102 (292)
T TIGR01777        72 KRWTEERKQEIRDSRIDTTRALVEAIAAAEQ  102 (292)
T ss_pred             ccCCHHHHHHHHhcccHHHHHHHHHHHhcCC
Confidence            2 1   2345567799999999999998764

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=97.63  E-value=0.0013  Score=66.04  Aligned_cols=114  Identities=16%  Similarity=0.154  Sum_probs=69.2

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC------------CCeEEEEeCCCchhh
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT------------GAVVRGFLGQPQLEN  105 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~------------~~~v~~~~~t~d~~~  105 (353)
                      +.++|||+|||- |+||..+|..|+. ++  +|+.||+++.  .+..|.....            ...+..   +++. +
T Consensus         3 ~~~~mkI~vIGl-GyvGlpmA~~la~-~~--~V~g~D~~~~--~ve~l~~G~~~~~e~~~~~l~~~g~l~~---t~~~-~   72 (425)
T PRK15182          3 GIDEVKIAIIGL-GYVGLPLAVEFGK-SR--QVVGFDVNKK--RILELKNGVDVNLETTEEELREARYLKF---TSEI-E   72 (425)
T ss_pred             CCCCCeEEEECc-CcchHHHHHHHhc-CC--EEEEEeCCHH--HHHHHHCcCCCCCCCCHHHHHhhCCeeE---EeCH-H
Confidence            356799999998 9999999999877 45  9999999862  2233332211            011222   3454 5


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEE-ecCCCCchhHH
Q 018618          106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL-ISNPVNSTVPI  167 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv-~tNPv~~~t~~  167 (353)
                      ++++||++|++.+.|.....      ..++..+....+.|.++. +..+||+ .|-|....-.+
T Consensus        73 ~~~~advvii~Vptp~~~~~------~~dl~~v~~a~~~i~~~l~~g~lVI~~STv~pgtt~~~  130 (425)
T PRK15182         73 KIKECNFYIITVPTPINTYK------QPDLTPLIKASETVGTVLNRGDIVVYESTVYPGCTEEE  130 (425)
T ss_pred             HHcCCCEEEEEcCCCCCCCC------CcchHHHHHHHHHHHHhcCCCCEEEEecCCCCcchHHH
Confidence            78999999999887753321      112233334444555444 3444444 35666555433

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.63  E-value=0.0004  Score=66.58  Aligned_cols=79  Identities=23%  Similarity=0.296  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ..|||+|+|+ |.+|++++..|...|+  +|.++|+++.                      .++++++++||+||++.. 
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~--~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp-   56 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGH--RVRVWSRRSG----------------------LSLAAVLADADVIVSAVS-   56 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCC--EEEEEeCCCC----------------------CCHHHHHhcCCEEEEECC-
Confidence            3579999999 9999999999999998  9999998641                      245677899999999842 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISN  159 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tN  159 (353)
                                     .+.++++++.+..+  .++.+++..|+
T Consensus        57 ---------------~~~~~~v~~~l~~~~~~~~~ivi~~s~   83 (308)
T PRK14619         57 ---------------MKGVRPVAEQVQALNLPPETIIVTATK   83 (308)
T ss_pred             ---------------hHHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence                           12355566666543  46777777776

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=97.62  E-value=0.00043  Score=66.77  Aligned_cols=161  Identities=14%  Similarity=0.047  Sum_probs=91.2

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhc-C-CCCCeEEEEe----CCCchhhhhC
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISH-M-DTGAVVRGFL----GQPQLENALT  108 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~-~-~~~~~v~~~~----~t~d~~~al~  108 (353)
                      ..+.++|.|+||+|++|++++..|+..|.  +|+++|.+..   ......+.. . .....+..+.    ...+++++++
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   80 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGY--EVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLD   80 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCC--EEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHH
Confidence            34557999999999999999999999988  8999987541   111111210 0 0011222211    1123445565


Q ss_pred             C--CcEEEEcCCCCCCC-C-CCHHHHHHHHHHHHHHHHHHHHhhCCC----cEEEEec-CCCCchh--HHHHHHHHHhCC
Q 018618          109 G--MDLVIIPAGVPRKP-G-MTRDDLFNINAGIVRTLCEGIAKCCPN----ATVNLIS-NPVNSTV--PIAAEVFKKAGT  177 (353)
Q Consensus       109 ~--ADiVIi~ag~~~~~-g-~~r~~~~~~N~~i~~~i~~~i~~~~p~----a~viv~t-NPv~~~t--~~~~~~~~~~~~  177 (353)
                      +  .|+||++|+..... . ......+..|+.....+++.+.++...    ..++.+| .-+....  ++     .....
T Consensus        81 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~-----~E~~~  155 (340)
T PLN02653         81 DIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQ-----SETTP  155 (340)
T ss_pred             HcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCC-----CCCCC
Confidence            4  59999999864321 1 123344577888899999999887643    2444443 1111000  00     01111


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCC
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLD  205 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~  205 (353)
                      +.+...+|.+.....++-..+++.++++
T Consensus       156 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~  183 (340)
T PLN02653        156 FHPRSPYAVAKVAAHWYTVNYREAYGLF  183 (340)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHcCCe
Confidence            2344567777666666666677777753

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=97.62  E-value=0.00018  Score=68.46  Aligned_cols=99  Identities=18%  Similarity=0.166  Sum_probs=65.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag~  119 (353)
                      |||.|+||+|++|++++..|...|   +++.+|..... ...|+.+            ...++++++  ++|+||++++.
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g---~V~~~~~~~~~-~~~Dl~d------------~~~~~~~~~~~~~D~Vih~Aa~   64 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG---NLIALDVHSTD-YCGDFSN------------PEGVAETVRKIRPDVIVNAAAH   64 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC---CEEEecccccc-ccCCCCC------------HHHHHHHHHhcCCCEEEECCcc
Confidence            689999999999999999998777   46777864310 0001111            123345555  58999999875


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          120 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       120 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ....  ..........|+....++++.+++.+  ..++.+|
T Consensus        65 ~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g--~~~v~~S  103 (299)
T PRK09987         65 TAVDKAESEPEFAQLLNATSVEAIAKAANEVG--AWVVHYS  103 (299)
T ss_pred             CCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC--CeEEEEc
Confidence            4221  12334445789999999999998875  3454444

>PLN02686 cinnamoyl-CoA reductase

Probab=97.57  E-value=0.00048  Score=67.60  Aligned_cols=176  Identities=13%  Similarity=0.091  Sum_probs=95.4

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcC---C-CCCeEEEEe----CCCchhhhhCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM---D-TGAVVRGFL----GQPQLENALTG  109 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~---~-~~~~v~~~~----~t~d~~~al~~  109 (353)
                      ...++|.|+||+|++|++++..|++.|+  +|+++..+... ....++...   . ....+..+.    ...++.+++++
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~--~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~  128 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGY--SVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG  128 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence            4467999999999999999999999998  88776554311 111122110   0 001222211    11235567899


Q ss_pred             CcEEEEcCCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCC-Cch--------hHHHHHHHH--Hh
Q 018618          110 MDLVIIPAGVPRKPGM--TRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPV-NST--------VPIAAEVFK--KA  175 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~--~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv-~~~--------t~~~~~~~~--~~  175 (353)
                      +|.|+.+++.....+.  ....+...|+....++.+.+.+. +.. .+|.+|... ...        ...+.+-.+  ..
T Consensus       129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~-r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~  207 (367)
T PLN02686        129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVR-KCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES  207 (367)
T ss_pred             ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence            9999998875422221  12344567899999999998875 233 334333311 000        000000000  00


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      .-.++.-.+|.+.+...++-..+++..|++..-++ +.|+|..
T Consensus       208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPG  250 (367)
T ss_pred             hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCC
Confidence            00111223566666666666666777677655553 5678864

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.57  E-value=0.00076  Score=65.14  Aligned_cols=98  Identities=20%  Similarity=0.257  Sum_probs=62.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC------C--CCCeEEEEeCCCchhhhhCCCc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM------D--TGAVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~------~--~~~~v~~~~~t~d~~~al~~AD  111 (353)
                      ..|||+|||+ |.+|+.++..|+..|+  +|.++|+++.......-.+.      .  ....+..   +++++++++++|
T Consensus         3 ~~m~I~iIG~-G~mG~~ia~~L~~~G~--~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~---~~~~~e~~~~aD   76 (328)
T PRK14618          3 HGMRVAVLGA-GAWGTALAVLAASKGV--PVRLWARRPEFAAALAAERENREYLPGVALPAELYP---TADPEEALAGAD   76 (328)
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE---eCCHHHHHcCCC
Confidence            3689999999 9999999999999888  89999996522221111110      0  0011332   346677889999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          112 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      +||++....                .+.++++.+   .|+.+++.++|...
T Consensus        77 ~Vi~~v~~~----------------~~~~v~~~l---~~~~~vi~~~~Gi~  108 (328)
T PRK14618         77 FAVVAVPSK----------------ALRETLAGL---PRALGYVSCAKGLA  108 (328)
T ss_pred             EEEEECchH----------------HHHHHHHhc---CcCCEEEEEeeccc
Confidence            999984211                023333332   36667777888643

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.56  E-value=0.00057  Score=66.51  Aligned_cols=99  Identities=18%  Similarity=0.181  Sum_probs=66.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC----CCCC-------eEEEEeCCCchhhhhC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM----DTGA-------VVRGFLGQPQLENALT  108 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~----~~~~-------~v~~~~~t~d~~~al~  108 (353)
                      .+|||+|+|+ |.+|+.++..|...+   +++++..++.  .+.++...    ...+       .+..   ++|+.++++
T Consensus         6 ~~mkI~IiGa-Ga~G~alA~~La~~g---~v~l~~~~~~--~~~~i~~~~~~~~~l~~~~~l~~~i~~---t~d~~~a~~   76 (341)
T PRK12439          6 REPKVVVLGG-GSWGTTVASICARRG---PTLQWVRSAE--TADDINDNHRNSRYLGNDVVLSDTLRA---TTDFAEAAN   76 (341)
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCC---CEEEEeCCHH--HHHHHHhcCCCcccCCCCcccCCCeEE---ECCHHHHHh
Confidence            4589999999 999999999999887   3567776542  22222211    1111       2332   457778899


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  163 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  163 (353)
                      ++|+||++..                ...++++++.+..+- ++..++.++|-.+.
T Consensus        77 ~aDlVilavp----------------s~~~~~vl~~i~~~l~~~~~vIsl~kGi~~  116 (341)
T PRK12439         77 CADVVVMGVP----------------SHGFRGVLTELAKELRPWVPVVSLVKGLEQ  116 (341)
T ss_pred             cCCEEEEEeC----------------HHHHHHHHHHHHhhcCCCCEEEEEEeCCcC
Confidence            9999999842                223566666666654 66778888887664

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=97.55  E-value=0.0006  Score=66.36  Aligned_cols=96  Identities=22%  Similarity=0.375  Sum_probs=63.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCC------CCcEEEEEeCCC---cHHHHHHHh--cCC--CC------CeEEEEeCCCch
Q 018618           43 KVAILGAAGGIGQPLAMLMKINP------LVSVLHLYDVVN---TPGVTADIS--HMD--TG------AVVRGFLGQPQL  103 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~------~~~el~L~D~~~---~~~~~~dl~--~~~--~~------~~v~~~~~t~d~  103 (353)
                      ||+|||+ |..|.++|..|..++      ...+|.|+.+++   -......++  |..  +.      ..++.   ++|+
T Consensus         1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~a---t~dl   76 (342)
T TIGR03376         1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVA---VPDL   76 (342)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEE---ECCH
Confidence            7999999 999999999999877      123999998743   122233332  221  11      12343   4688


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                      ++++++||+||++.  |              ...++++++.+..+- ++..++.+|
T Consensus        77 ~eal~~ADiIIlAV--P--------------s~~i~~vl~~l~~~l~~~~~iVs~t  116 (342)
T TIGR03376        77 VEAAKGADILVFVI--P--------------HQFLEGICKQLKGHVKPNARAISCI  116 (342)
T ss_pred             HHHHhcCCEEEEEC--C--------------hHHHHHHHHHHHhhcCCCCEEEEEe
Confidence            89999999999974  2              334666677776654 445566555

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=97.54  E-value=0.00017  Score=67.29  Aligned_cols=114  Identities=17%  Similarity=0.091  Sum_probs=69.4

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..++||+|+||+||||||++-.|+..|+  +|..+|..- .+....++|....+..+... ..-...-++.+|-|+.+|.
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh--~VIa~Dn~f-tg~k~n~~~~~~~~~fel~~-hdv~~pl~~evD~IyhLAa  100 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGH--EVIALDNYF-TGRKENLEHWIGHPNFELIR-HDVVEPLLKEVDQIYHLAA  100 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCC--eEEEEeccc-ccchhhcchhccCcceeEEE-eechhHHHHHhhhhhhhcc
Confidence            4558999999999999999999999997  999999754 22333344443333333221 1222456899999999876


Q ss_pred             CCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          119 VPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       119 ~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ....++  .+-.+.+.-|.-....+....++.+  +.++.+|
T Consensus       101 pasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aS  140 (350)
T KOG1429|consen  101 PASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLAS  140 (350)
T ss_pred             CCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEee
Confidence            432222  2223333444444445555555443  5555554

>PRK07201 short chain dehydrogenase; Provisional

Probab=97.53  E-value=0.0014  Score=68.82  Aligned_cols=111  Identities=14%  Similarity=0.113  Sum_probs=69.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHh--CCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----------CchhhhhCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKI--NPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----------PQLENALTG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~--~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----------~d~~~al~~  109 (353)
                      |||.|+||+|++|++++..|+.  .+.  +|++++++.......++........++.+.+.          .++ +.+++
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~--~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~~l~~   77 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREA--TVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADI-AELGD   77 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCC--EEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHH-HHhcC
Confidence            6899999999999999999984  455  89999986522222222111000122222110          122 23489


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  156 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv  156 (353)
                      +|+||++++... ...+..+....|+.....+++.+.+.....++.+
T Consensus        78 ~D~Vih~Aa~~~-~~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~  123 (657)
T PRK07201         78 IDHVVHLAAIYD-LTADEEAQRAANVDGTRNVVELAERLQAATFHHV  123 (657)
T ss_pred             CCEEEECceeec-CCCCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEE
Confidence            999999987542 2234456678899999999999887643433333

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=97.50  E-value=0.00065  Score=65.23  Aligned_cols=120  Identities=16%  Similarity=0.225  Sum_probs=70.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHH---HHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA---DISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~---dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .+|||+|+|+ |.+|..+|..|...|+  ++.+++++.......   .+........+......++. ++...+|+||++
T Consensus         4 ~~m~I~IiG~-GaiG~~lA~~L~~~g~--~V~~~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vila   79 (313)
T PRK06249          4 ETPRIGIIGT-GAIGGFYGAMLARAGF--DVHFLLRSDYEAVRENGLQVDSVHGDFHLPPVQAYRSA-EDMPPCDWVLVG   79 (313)
T ss_pred             cCcEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHHHhCCeEEEeCCCCeeecCceEEcch-hhcCCCCEEEEE
Confidence            4589999999 9999999999999887  999999865221111   00000000011100011232 356889999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      .....                ..+.++.+... .|++.++...|=.+..-.     +.+.  +|++++++-
T Consensus        80 vK~~~----------------~~~~~~~l~~~~~~~~~iv~lqNG~~~~e~-----l~~~--~~~~~v~~g  127 (313)
T PRK06249         80 LKTTA----------------NALLAPLIPQVAAPDAKVLLLQNGLGVEEQ-----LREI--LPAEHLLGG  127 (313)
T ss_pred             ecCCC----------------hHhHHHHHhhhcCCCCEEEEecCCCCcHHH-----HHHH--CCCCcEEEE
Confidence            53221                12334444443 378888888887765432     2232  677787754

>PLN02253 xanthoxin dehydrogenase

Probab=97.49  E-value=0.0023  Score=59.80  Aligned_cols=147  Identities=17%  Similarity=0.190  Sum_probs=82.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------  108 (353)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|.++  ......++..   ...+..+. .-+|   .+++++      
T Consensus        18 ~k~~lItGas~gIG~~la~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         18 GKVALVTGGATGIGESIVRLFHKHGA--KVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            34799999999999999999999887  899999865  2222223321   11222211 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          109 -GMDLVIIPAGVPRKP-----GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~-----g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                       ..|++|+.+|.....     ..+   ....+..|+.....+.+.+...   ...+.+++++......            
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------  160 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAI------------  160 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcc------------
Confidence             689999999864321     112   2344566766555544444322   1345666665432211            


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCC
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGL  204 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v  204 (353)
                      +.+..-.+|.+......+-+.+++.++-
T Consensus       161 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~  188 (280)
T PLN02253        161 GGLGPHAYTGSKHAVLGLTRSVAAELGK  188 (280)
T ss_pred             cCCCCcccHHHHHHHHHHHHHHHHHhhh
Confidence            1222235666655555677778887753

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.47  E-value=0.00099  Score=66.60  Aligned_cols=109  Identities=21%  Similarity=0.213  Sum_probs=67.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC----------------CCeEEEEeCCCchh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT----------------GAVVRGFLGQPQLE  104 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~----------------~~~v~~~~~t~d~~  104 (353)
                      .+||+|||. |+||..+|..|++.|+  +|+.+|+++.+-..  +.....                ...+..   +++  
T Consensus         3 ~~kI~VIGl-G~~G~~~A~~La~~G~--~V~~~D~~~~~v~~--l~~g~~~~~e~~l~~~l~~~~~~g~l~~---~~~--   72 (415)
T PRK11064          3 FETISVIGL-GYIGLPTAAAFASRQK--QVIGVDINQHAVDT--INRGEIHIVEPDLDMVVKTAVEGGYLRA---TTT--   72 (415)
T ss_pred             ccEEEEECc-chhhHHHHHHHHhCCC--EEEEEeCCHHHHHH--HHCCCCCcCCCCHHHHHHHHhhcCceee---ecc--
Confidence            469999999 9999999999999997  99999997622121  221110                011221   222  


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhHH
Q 018618          105 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPI  167 (353)
Q Consensus       105 ~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~~  167 (353)
                        +++||+||++...|.....      ..++..+.+.++.+..+. ++.+||+- |.|....-.+
T Consensus        73 --~~~aDvvii~vptp~~~~~------~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~pgtt~~~  129 (415)
T PRK11064         73 --PEPADAFLIAVPTPFKGDH------EPDLTYVEAAAKSIAPVLKKGDLVILESTSPVGATEQM  129 (415)
T ss_pred             --cccCCEEEEEcCCCCCCCC------CcChHHHHHHHHHHHHhCCCCCEEEEeCCCCCCHHHHH
Confidence              3589999999877643221      122334555556666655 45555554 4576655443

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.46  E-value=0.0024  Score=58.64  Aligned_cols=115  Identities=16%  Similarity=0.216  Sum_probs=67.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCch---hhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL---ENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~al-------  107 (353)
                      .+++.|+||+|.+|++++..|++.|.  +|++++.++  ......++.+..  ..+..+.. -+|.   ++++       
T Consensus         7 ~~~vlItGasg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (262)
T PRK13394          7 GKTAVVTGAASGIGKEIALELARAGA--AVAIADLNQDGANAVADEINKAG--GKAIGVAMDVTNEDAVNAGIDKVAERF   82 (262)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCChHHHHHHHHHHHhcC--ceEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34899999999999999999999998  899999876  233333444322  22222211 1221   1222       


Q ss_pred             CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g---~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      .+.|+||.++|.....   .   ....+.+..|+..    .+.+.+.+.+..+.+.++++|.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss  144 (262)
T PRK13394         83 GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGS  144 (262)
T ss_pred             CCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcc
Confidence            3489999998864211   1   1123345566666    5566666633334455555543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=97.45  E-value=0.00058  Score=63.94  Aligned_cols=95  Identities=23%  Similarity=0.305  Sum_probs=67.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCC--cEEEEcCCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM--DLVIIPAGVP  120 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~A--DiVIi~ag~~  120 (353)
                      ||.|+||+|++|++++..|.+.|+  +|++++...     .|+.+            ..++.++++++  |+||.+++..
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~--~v~~~~r~~-----~d~~~------------~~~~~~~~~~~~~d~vi~~a~~~   61 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGR--VVVALTSSQ-----LDLTD------------PEALERLLRAIRPDAVVNTAAYT   61 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCC--EEEEeCCcc-----cCCCC------------HHHHHHHHHhCCCCEEEECCccc
Confidence            689999999999999999998887  899888641     12211            12345666665  9999998754


Q ss_pred             CCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          121 RKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       121 ~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ....  .........|+.....+++.+.+...  .++++|
T Consensus        62 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S   99 (287)
T TIGR01214        62 DVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLVHIS   99 (287)
T ss_pred             cccccccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence            3221  23455678899999999999887643  444444

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02240 UDP-glucose 4-epimerase

Probab=97.44  E-value=0.0024  Score=61.68  Aligned_cols=115  Identities=18%  Similarity=0.164  Sum_probs=70.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC--CCCeEEEEe----CCCchhhhhC--CC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFL----GQPQLENALT--GM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~--~~~~v~~~~----~t~d~~~al~--~A  110 (353)
                      .+||.|+||+|++|++++..|++.|.  +|+++|...  .......+.+..  ....+..+.    ...+++++++  ++
T Consensus         5 ~~~vlItGatG~iG~~l~~~L~~~g~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~   82 (352)
T PLN02240          5 GRTILVTGGAGYIGSHTVLQLLLAGY--KVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF   82 (352)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence            35899999999999999999998887  899998643  111111111110  011222211    1123334444  68


Q ss_pred             cEEEEcCCCCCC-CC-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          111 DLVIIPAGVPRK-PG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       111 DiVIi~ag~~~~-~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      |+||++++.... .. ......+..|+.....+++.+++..... ++.+|
T Consensus        83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  131 (352)
T PLN02240         83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKK-LVFSS  131 (352)
T ss_pred             CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCE-EEEEc
Confidence            999999875421 11 2345678899999999999887764333 44444

>PRK08267 short chain dehydrogenase; Provisional

Probab=97.43  E-value=0.0033  Score=57.99  Aligned_cols=116  Identities=22%  Similarity=0.274  Sum_probs=66.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEE-EeCCCchhhhh--------CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENAL--------TGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~-~~~t~d~~~al--------~~A  110 (353)
                      +++.|+||+|.+|..++..|++.|.  +|+++|.+..  .....++..... ..+.. +....+.++++        ...
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~~~i   78 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW--RVGAYDINEAGLAALAAELGAGNA-WTGALDVTDRAAWDAALADFAAATGGRL   78 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHhcCCce-EEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4699999999999999999999987  8999998652  212222221110 01111 11112222333        345


Q ss_pred             cEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHh---hCCCcEEEEecCC
Q 018618          111 DLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAK---CCPNATVNLISNP  160 (353)
Q Consensus       111 DiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~---~~p~a~viv~tNP  160 (353)
                      |+||.++|......   .+   ....+..|+.....+.+.+..   ..+.+.+++++..
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~  137 (260)
T PRK08267         79 DVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSA  137 (260)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCch
Confidence            99999998653211   12   234566777766666555533   2344556655543

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=97.42  E-value=0.0019  Score=60.86  Aligned_cols=165  Identities=15%  Similarity=0.119  Sum_probs=101.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEE-eCCCchhhhhC--CCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGF-LGQPQLENALT--GMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~-~~t~d~~~al~--~ADiVIi  115 (353)
                      |++.|+|++||+|+++...+..+..-.+|+.+|.-.-   .....++.+......+++- +......+.++  +.|+|+.
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            5899999999999999988877655457899997652   2223445543222223321 11122334555  6999999


Q ss_pred             cCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-cEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHH
Q 018618          116 PAGVPR--KPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVV  192 (353)
Q Consensus       116 ~ag~~~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~  192 (353)
                      .|.-..  +.=....+++.-|+-....+.+.++++... -.+-+.|.-|.---..-...+...+.+.|+-.+..+.-.+.
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD  160 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASD  160 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHH
Confidence            875332  111235678899999999999999999864 34555565543110000000123455777777776544455


Q ss_pred             HHHHHHHHHhCCCC
Q 018618          193 RANTFVAEVLGLDP  206 (353)
Q Consensus       193 R~~~~lA~~l~v~~  206 (353)
                      -+-+...+.+|++.
T Consensus       161 ~lVray~~TYglp~  174 (340)
T COG1088         161 LLVRAYVRTYGLPA  174 (340)
T ss_pred             HHHHHHHHHcCCce
Confidence            56677778888864

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=97.41  E-value=0.0011  Score=62.56  Aligned_cols=64  Identities=23%  Similarity=0.269  Sum_probs=45.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||. |.+|..++..|...|+  +|.++|.++ ....+.+.   .   .+..  .+++. +++++||+||++.
T Consensus         1 m~I~IIG~-G~mG~sla~~L~~~g~--~V~~~d~~~~~~~~a~~~---g---~~~~--~~~~~-~~~~~aDlVilav   65 (279)
T PRK07417          1 MKIGIVGL-GLIGGSLGLDLRSLGH--TVYGVSRRESTCERAIER---G---LVDE--ASTDL-SLLKDCDLVILAL   65 (279)
T ss_pred             CeEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHC---C---Cccc--ccCCH-hHhcCCCEEEEcC
Confidence            58999998 9999999999998887  899999875 21122111   1   1111  12344 5689999999985

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=97.41  E-value=0.0011  Score=62.68  Aligned_cols=109  Identities=11%  Similarity=0.119  Sum_probs=66.9

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhh----hCCCcEEEEcCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA----LTGMDLVIIPAGV  119 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~a----l~~ADiVIi~ag~  119 (353)
                      |.|+||+|++|++++..|...|.. +|+++|..........+........+..   ...++..    +.++|+||++|+.
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~~~~~D~vvh~A~~   76 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGIT-DILVVDNLRDGHKFLNLADLVIADYIDK---EDFLDRLEKGAFGKIEAIFHQGAC   76 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCc-eEEEEecCCCchhhhhhhheeeeccCcc---hhHHHHHHhhccCCCCEEEECccc
Confidence            579999999999999999988842 6888886542111111111000011111   1122222    2489999999986


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ......+.......|+.....+++.+.+...  .++.+|
T Consensus        77 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~v~~S  113 (314)
T TIGR02197        77 SDTTETDGEYMMENNYQYSKRLLDWCAEKGI--PFIYAS  113 (314)
T ss_pred             cCccccchHHHHHHHHHHHHHHHHHHHHhCC--cEEEEc
Confidence            4322234455678899999999999987653  344444

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=97.40  E-value=0.00051  Score=57.28  Aligned_cols=102  Identities=21%  Similarity=0.229  Sum_probs=57.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ..+||+|||+ |.||.+++..|...|+  +|.-+-.+. ...+..+.+.-  +....    .++++.+++||+++++.. 
T Consensus         9 ~~l~I~iIGa-GrVG~~La~aL~~ag~--~v~~v~srs-~~sa~~a~~~~--~~~~~----~~~~~~~~~aDlv~iavp-   77 (127)
T PF10727_consen    9 ARLKIGIIGA-GRVGTALARALARAGH--EVVGVYSRS-PASAERAAAFI--GAGAI----LDLEEILRDADLVFIAVP-   77 (127)
T ss_dssp             ---EEEEECT-SCCCCHHHHHHHHTTS--EEEEESSCH-H-HHHHHHC----TT---------TTGGGCC-SEEEE-S--
T ss_pred             CccEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeCC-ccccccccccc--ccccc----cccccccccCCEEEEEec-
Confidence            3579999999 9999999999999997  666655432 22223333321  11121    234577899999999852 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhh--CCCcEEEEec---CCCCchhHH
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLIS---NPVNSTVPI  167 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~t---NPv~~~t~~  167 (353)
                          +    |       .+.++++++..+  ...+.+++-|   -+++++.++
T Consensus        78 ----D----d-------aI~~va~~La~~~~~~~g~iVvHtSGa~~~~vL~p~  115 (127)
T PF10727_consen   78 ----D----D-------AIAEVAEQLAQYGAWRPGQIVVHTSGALGSDVLAPA  115 (127)
T ss_dssp             ----C----C-------HHHHHHHHHHCC--S-TT-EEEES-SS--GGGGHHH
T ss_pred             ----h----H-------HHHHHHHHHHHhccCCCCcEEEECCCCChHHhhhhH
Confidence                1    1       267888888877  3233344433   556777653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=97.38  E-value=0.0075  Score=55.48  Aligned_cols=116  Identities=13%  Similarity=0.166  Sum_probs=66.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG  109 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~  109 (353)
                      +|.|+||+|.+|.+++..|++.|.  +|+++|.+.  ......++........+..+. .-+|   .+.++       ..
T Consensus         4 ~ilItG~~~~IG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          4 VAVVIGGGQTLGAFLCHGLAEEGY--RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            799999999999999999999987  899999865  222222333211111222211 1122   12222       46


Q ss_pred             CcEEEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCC
Q 018618          110 MDLVIIPAGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      .|+||.++|.+...   ..+..   ..+..|+..    .+.+.+.+.+..+++.++.+|..
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~  142 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK  142 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence            79999999865321   12222   234556554    44555555544445566666653

>PRK12829 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0054  Score=56.40  Aligned_cols=100  Identities=21%  Similarity=0.368  Sum_probs=58.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------  106 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------  106 (353)
                      +.+++.|+||+|.+|+.++..|++.|.  +|++++.++.  .....++...    .+..+. .-+|   +.++       
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGA--RVHVCDVSEAALAATAARLPGA----KVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcC----ceEEEEccCCCHHHHHHHHHHHHHH
Confidence            346999999999999999999999988  8999998652  2111222211    111111 1112   1122       


Q ss_pred             hCCCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHH
Q 018618          107 LTGMDLVIIPAGVPRKPG----MTR---DDLFNINAGIVRTLCEGI  145 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~g----~~r---~~~~~~N~~i~~~i~~~i  145 (353)
                      +.+.|+||..+|.....+    .+.   ...+..|......+.+.+
T Consensus        84 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  129 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAA  129 (264)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            247899999988642221    122   234456665555555544

>PRK08643 acetoin reductase; Validated

Probab=97.35  E-value=0.011  Score=54.24  Aligned_cols=155  Identities=18%  Similarity=0.171  Sum_probs=82.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|.+.  ......++.+..  ..+..+. .-+|.   .++       +.
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGF--KVAIVDYNEETAQAAADKLSKDG--GKAIAVKADVSDRDQVFAAVRQVVDTFG   78 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3789999999999999999999887  899999876  222333343321  1222111 11121   122       24


Q ss_pred             CCcEEEEcCCCCC-CCC--CC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPR-KPG--MT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~-~~g--~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      +.|+||+++|... .+-  .+   ....+..|+....    .+.+.+.+..+++.++++|......            +.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~  146 (256)
T PRK08643         79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVV------------GN  146 (256)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccccc------------CC
Confidence            6899999988642 111  11   1234455665443    3344444334456777666533211            12


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      |..-.++.+......+-+.+++.+  .+..+++..+
T Consensus       147 ~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v~~i  180 (256)
T PRK08643        147 PELAVYSSTKFAVRGLTQTAARDL--ASEGITVNAY  180 (256)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHh--cccCcEEEEE
Confidence            222334444333334555666654  3445554444

>PRK07102 short chain dehydrogenase; Provisional

Probab=97.34  E-value=0.012  Score=53.61  Aligned_cols=115  Identities=19%  Similarity=0.070  Sum_probs=67.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC----CCchhhhh----CCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENAL----TGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al----~~AD  111 (353)
                      ++|.|+||+|.+|..++..|++.|.  +|+++|+++  ......++.... ...+..+..    ..+.++.+    +..|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA--RLYLAARDVERLERLADDLRARG-AVAVSTHELDILDTASHAAFLDSLPALPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence            5899999999999999999999887  899999876  222233333211 122322211    11222222    2459


Q ss_pred             EEEEcCCCCC---CCCCCHH---HHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618          112 LVIIPAGVPR---KPGMTRD---DLFNINAGIVRTLCEGIAKCC---PNATVNLISN  159 (353)
Q Consensus       112 iVIi~ag~~~---~~g~~r~---~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  159 (353)
                      +||+.+|...   ....+..   +.+..|+.....+.+.+..+.   ..+.++++|-
T Consensus        79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  135 (243)
T PRK07102         79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISS  135 (243)
T ss_pred             EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEec
Confidence            9999887532   1122332   345677776666666655432   3455666654

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.34  E-value=0.0022  Score=63.13  Aligned_cols=75  Identities=23%  Similarity=0.240  Sum_probs=50.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||.|||| |.||+.+|..|++.+. .+|.+.|+... ...+.+..+.... ..+... ....+.+++++.|+||.++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d-~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~-d~~al~~li~~~d~VIn~~p   77 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGD-GEVTIADRSKEKCARIAELIGGKVEALQVDAA-DVDALVALIKDFDLVINAAP   77 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCC-ceEEEEeCCHHHHHHHHhhccccceeEEeccc-ChHHHHHHHhcCCEEEEeCC
Confidence            479999999 9999999999999885 59999998752 2222222211111 122221 12345688899999999864

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.33  E-value=0.0087  Score=56.06  Aligned_cols=118  Identities=19%  Similarity=0.200  Sum_probs=75.5

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe----CCCchhh------
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLEN------  105 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~----~t~d~~~------  105 (353)
                      ....+.+.|+||++-+|..+|..|+.+|+  +|+|+.+++  +...+.++++.- ...+..+.    .+++.+.      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~--~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~   79 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGY--NLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELK   79 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHH
Confidence            34556899999999999999999999999  999999987  666777777643 12222211    1122221      


Q ss_pred             -hhCCCcEEEEcCCCCCCC------CCCHHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecC
Q 018618          106 -ALTGMDLVIIPAGVPRKP------GMTRDDLFNINAGIVRTLCE----GIAKCCPNATVNLISN  159 (353)
Q Consensus       106 -al~~ADiVIi~ag~~~~~------g~~r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tN  159 (353)
                       ..-..|+.|..||.....      -.+-.+++.-|+-.+..+..    .+.+.. .+.||+++.
T Consensus        80 ~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S  143 (265)
T COG0300          80 ERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGS  143 (265)
T ss_pred             hcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEec
Confidence             112689999999865322      12234667777665555544    444432 455666653

>PRK12320 hypothetical protein; Provisional

Probab=97.31  E-value=0.00078  Score=71.20  Aligned_cols=101  Identities=14%  Similarity=0.105  Sum_probs=66.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||.|+||+|++|++++..|...|+  +|+.+|.....     ..+... ..+..-.....+.+++.++|+||++++...
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~--~Vi~ldr~~~~-----~~~~~v-e~v~~Dl~d~~l~~al~~~D~VIHLAa~~~   72 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGH--TVSGIAQHPHD-----ALDPRV-DYVCASLRNPVLQELAGEADAVIHLAPVDT   72 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCChhh-----cccCCc-eEEEccCCCHHHHHHhcCCCEEEEcCccCc
Confidence            6999999999999999999999887  99999975411     111110 111110001124566789999999986431


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                        ..    ....|+....++++.+++.+.  .+|.+|
T Consensus        73 --~~----~~~vNv~Gt~nLleAA~~~Gv--RiV~~S  101 (699)
T PRK12320         73 --SA----PGGVGITGLAHVANAAARAGA--RLLFVS  101 (699)
T ss_pred             --cc----hhhHHHHHHHHHHHHHHHcCC--eEEEEE
Confidence              11    124688888999998887654  455554

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=97.30  E-value=0.001  Score=60.07  Aligned_cols=167  Identities=17%  Similarity=0.155  Sum_probs=95.0

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCC--cEEEEcCCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGM--DLVIIPAGVP  120 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~A--DiVIi~ag~~  120 (353)
                      |.|+||+|++|++++..|...+.  +++-+.... ............. .... .....++++++++.  |.||.+++..
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~-~~~d-l~~~~~~~~~~~~~~~d~vi~~a~~~   76 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGH--EVIVLSRSSNSESFEEKKLNVEF-VIGD-LTDKEQLEKLLEKANIDVVIHLAAFS   76 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTT--EEEEEESCSTGGHHHHHHTTEEE-EESE-TTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred             EEEEccCCHHHHHHHHHHHHcCC--ccccccccccccccccccceEEE-EEee-ccccccccccccccCceEEEEeeccc
Confidence            78999999999999999999998  655555444 2222221111000 0011 01123455667777  9999998765


Q ss_pred             C--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHH
Q 018618          121 R--KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF  197 (353)
Q Consensus       121 ~--~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~  197 (353)
                      .  .......+....|+...+.+.+.+.+... ..++..+.. +.....  ...+.....+.+...+|.+.....++-..
T Consensus        77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~i~~sS~~~y~~~~--~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~  153 (236)
T PF01370_consen   77 SNPESFEDPEEIIEANVQGTRNLLEAAREAGV-KRFIFLSSASVYGDPD--GEPIDEDSPINPLSPYGASKRAAEELLRD  153 (236)
T ss_dssp             SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEGGGGTSSS--SSSBETTSGCCHSSHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccc-cccccccccccccccc--ccccccccccccccccccccccccccccc
Confidence            2  11134567788999999999999998877 344444331 110000  00000000111223356655555566666


Q ss_pred             HHHHhCCCCCCCc-ceEEeec
Q 018618          198 VAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       198 lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ++++.+++...++ ..++|.+
T Consensus       154 ~~~~~~~~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  154 YAKKYGLRVTILRPPNVYGPG  174 (236)
T ss_dssp             HHHHHTSEEEEEEESEEESTT
T ss_pred             ccccccccccccccccccccc
Confidence            7777777766664 4566655

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK05717 oxidoreductase; Validated

Probab=97.30  E-value=0.0021  Score=59.22  Aligned_cols=145  Identities=13%  Similarity=0.117  Sum_probs=82.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LTGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~~A  110 (353)
                      ++|.|+||+|.+|++++..|+..|.  +|+++|.+....... ..+..  ..+..+. .-+|.   +++       +...
T Consensus        11 k~vlItG~sg~IG~~~a~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   85 (255)
T PRK05717         11 RVALVTGAARGIGLGIAAWLIAEGW--QVVLADLDRERGSKV-AKALG--ENAWFIAMDVADEAQVAAGVAEVLGQFGRL   85 (255)
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHH-HHHcC--CceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4799999999999999999999887  899999765221111 11111  1111111 11121   111       2347


Q ss_pred             cEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRKP-----GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~~-----g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..+|.....     ..+   ....+..|+.....+.+.+..+-  ..+.+|++|......            +.+.
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~------------~~~~  153 (255)
T PRK05717         86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQ------------SEPD  153 (255)
T ss_pred             CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcC------------CCCC
Confidence            9999999864321     112   23456778777777777775432  345666665432211            1222


Q ss_pred             CceEeechhhHHHHHHHHHHHhC
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      .-.+|.+......+-+.+++.++
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~  176 (255)
T PRK05717        154 TEAYAASKGGLLALTHALAISLG  176 (255)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhc
Confidence            23466654444456677788775

>PRK05866 short chain dehydrogenase; Provisional

Probab=97.30  E-value=0.0077  Score=57.09  Aligned_cols=96  Identities=18%  Similarity=0.206  Sum_probs=59.4

Q ss_pred             CcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe
Q 018618           21 PNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL   98 (353)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~   98 (353)
                      |-.|...++.+..+...-...++|.|+||+|.+|..++..|++.|.  +|+++|++.  +.....++....  ..+..+.
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~k~vlItGasggIG~~la~~La~~G~--~Vi~~~R~~~~l~~~~~~l~~~~--~~~~~~~   95 (293)
T PRK05866         20 PPISPQLLINRPPRQPVDLTGKRILLTGASSGIGEAAAEQFARRGA--TVVAVARREDLLDAVADRITRAG--GDAMAVP   95 (293)
T ss_pred             CCCCchhhcCCCCCCCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEE
Confidence            4456666765554443233346899999999999999999999887  999999876  222333332211  1122111


Q ss_pred             C----CCchhhhh-------CCCcEEEEcCCCC
Q 018618           99 G----QPQLENAL-------TGMDLVIIPAGVP  120 (353)
Q Consensus        99 ~----t~d~~~al-------~~ADiVIi~ag~~  120 (353)
                      .    ..+.++++       .+.|++|..+|..
T Consensus        96 ~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~  128 (293)
T PRK05866         96 CDLSDLDAVDALVADVEKRIGGVDILINNAGRS  128 (293)
T ss_pred             ccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            1    11222333       3789999998854

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.30  E-value=0.0099  Score=54.14  Aligned_cols=114  Identities=18%  Similarity=0.258  Sum_probs=64.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeC----CCchhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG----QPQLENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~----t~d~~~al-------  107 (353)
                      .++|.|+||+|.+|..++..|++.|.  +|++++++..  .....++.+   ...+..+..    ..+...++       
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAEGA--RVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALERF   79 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999987  8999998762  222233332   112222211    11222222       


Q ss_pred             CCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  159 (353)
                      ...|+||.++|.....    ..+   ..+.+..|+.....+.+.+..+.   ....++++|.
T Consensus        80 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  141 (251)
T PRK07231         80 GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVAS  141 (251)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcC
Confidence            3579999998863211    112   22345566655444444444332   2344555443

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=97.29  E-value=0.0041  Score=57.22  Aligned_cols=145  Identities=17%  Similarity=0.165  Sum_probs=81.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~AD  111 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|.+..  .....++....  ..+.. .....+.+++       +...|
T Consensus         7 ~~vlItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (257)
T PRK07067          7 KVALLTGAASGIGEAVAERYLAEGA--RVVIADIKPARARLAALEIGPAA--IAVSLDVTRQDSIDRIVAAAVERFGGID   82 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHhCCce--EEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999998  8999998762  22222222110  00111 1111122222       24689


Q ss_pred             EEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhh----CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          112 LVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       112 iVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      ++|+.+|.... +  ..+   ....+..|+.....+.+.+..+    .+.+.++++|.....            .+.++.
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~  150 (257)
T PRK07067         83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR------------RGEALV  150 (257)
T ss_pred             EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC------------CCCCCC
Confidence            99999875421 1  112   3344667777666666665433    234566666553211            123334


Q ss_pred             ceEeechhhHHHHHHHHHHHh
Q 018618          182 KLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l  202 (353)
                      -.++.+......+.+.+++.+
T Consensus       151 ~~Y~~sK~a~~~~~~~la~e~  171 (257)
T PRK07067        151 SHYCATKAAVISYTQSAALAL  171 (257)
T ss_pred             chhhhhHHHHHHHHHHHHHHh
Confidence            445554443344556666665

>PRK05865 hypothetical protein; Provisional

Probab=97.29  E-value=0.0016  Score=70.22  Aligned_cols=104  Identities=17%  Similarity=0.164  Sum_probs=70.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      |||.|+||+|++|++++..|...|+  +|+.+|.+....    +. ... ..+.. .....++.++++++|+||++++..
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~--~Vv~l~R~~~~~----~~-~~v-~~v~gDL~D~~~l~~al~~vD~VVHlAa~~   72 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGH--EVVGIARHRPDS----WP-SSA-DFIAADIRDATAVESAMTGADVVAHCAWVR   72 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCchhh----cc-cCc-eEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence            6899999999999999999999888  899999764110    11 010 11111 111235567789999999998643


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      ..       ....|+....++++.+++.+.. .++++|.+.
T Consensus        73 ~~-------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~~  105 (854)
T PRK05865         73 GR-------NDHINIDGTANVLKAMAETGTG-RIVFTSSGH  105 (854)
T ss_pred             cc-------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCcH
Confidence            21       3467888888999988876533 556666554

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.28  E-value=0.0017  Score=62.96  Aligned_cols=97  Identities=23%  Similarity=0.272  Sum_probs=64.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|.|+||+|++|+.++..|....-..+|++++++.  +.....++.+..    +      .++++++.++|+||.++
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~----i------~~l~~~l~~aDiVv~~t  223 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK----I------LSLEEALPEADIVVWVA  223 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc----H------HhHHHHHccCCEEEECC
Confidence            34689999999999999999997542245899999865  222222222111    1      24678999999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCch
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST  164 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~  164 (353)
                      +.+...-.+..++                  .+..+++=++.|=|+-
T Consensus       224 s~~~~~~I~~~~l------------------~~~~~viDiAvPRDVd  252 (340)
T PRK14982        224 SMPKGVEIDPETL------------------KKPCLMIDGGYPKNLD  252 (340)
T ss_pred             cCCcCCcCCHHHh------------------CCCeEEEEecCCCCCC
Confidence            8764211222111                  2567777788887765

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=97.27  E-value=0.0036  Score=57.57  Aligned_cols=116  Identities=16%  Similarity=0.224  Sum_probs=69.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .++|.|+||+|.+|..++..|+..|.  +|+++|.++  ......++...  ...+..+. .-+|   .++++       
T Consensus        10 ~k~vlItGa~g~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523         10 GRRALVTGSSQGIGYALAEGLAQAGA--EVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999888  899999876  22222333322  11222211 1112   22222       


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCC
Q 018618          108 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP  160 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP  160 (353)
                      ...|+||..+|.... +  ..+   ..+.+..|+.....+.+.+.++.   ..+.++++|..
T Consensus        86 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~  147 (255)
T PRK07523         86 GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASV  147 (255)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccc
Confidence            357999999886421 1  111   23455677776666666665542   34566666643

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=97.27  E-value=0.0027  Score=62.93  Aligned_cols=113  Identities=19%  Similarity=0.174  Sum_probs=68.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--H--HHHHHhcCCCCCe-EEE-EeCCCchhhhhC----C
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G--VTADISHMDTGAV-VRG-FLGQPQLENALT----G  109 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~--~~~dl~~~~~~~~-v~~-~~~t~d~~~al~----~  109 (353)
                      ..+||.|+||+|++|++++..|+..|+  +|++++++...  .  ...++........ +.. .....++.++++    +
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~  136 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGY--NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDP  136 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCC
Confidence            346999999999999999999999887  89999986511  0  1111111100111 111 111233455566    5


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +|+||.+++.+.. +  ..+.+..|.....++.+.+++.+-.- ++++|
T Consensus       137 ~D~Vi~~aa~~~~-~--~~~~~~vn~~~~~~ll~aa~~~gv~r-~V~iS  181 (390)
T PLN02657        137 VDVVVSCLASRTG-G--VKDSWKIDYQATKNSLDAGREVGAKH-FVLLS  181 (390)
T ss_pred             CcEEEECCccCCC-C--CccchhhHHHHHHHHHHHHHHcCCCE-EEEEe
Confidence            9999998764321 1  12334667888888888888765443 34443

>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.27  E-value=0.002  Score=62.07  Aligned_cols=111  Identities=15%  Similarity=0.126  Sum_probs=72.5

Q ss_pred             cHHHHHHHHHhCCCCcEEEEEeCCCc--H--------HH--HHH----Hh-cCC--------CCCeEEEEeCCCchhhhh
Q 018618           53 IGQPLAMLMKINPLVSVLHLYDVVNT--P--------GV--TAD----IS-HMD--------TGAVVRGFLGQPQLENAL  107 (353)
Q Consensus        53 vG~~la~~l~~~~~~~el~L~D~~~~--~--------~~--~~d----l~-~~~--------~~~~v~~~~~t~d~~~al  107 (353)
                      +|+.+|..++..|+  +|+|+|.++.  .        +.  ..+    +. +..        ...+++.. .+.|.++++
T Consensus         1 MG~giA~~~a~~G~--~V~l~d~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~~a~   77 (314)
T PRK08269          1 MGQGIALAFAFAGH--DVTLIDFKPRDAAGWRALDAEARAEIERTLAALVALGRIDAAQADAVLARIAVV-ARDGAADAL   77 (314)
T ss_pred             CcHHHHHHHHhCCC--eEEEEeCCcccchhhHHHHHHHHHHHHHHHHHHHHcCCCChhhHHHHHhCeEee-cCcchHHHh
Confidence            57889999999998  9999999871  1        11  001    11 110        01245543 123466889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      ++||+||.+.              .++.++.+++...+.+.+ |++++  .||.+.....-++    .... .|+|++|+
T Consensus        78 ~~aD~ViEav--------------~E~~~~K~~~f~~l~~~~~~~~il--aSntS~~~~~~la----~~~~-~p~r~~g~  136 (314)
T PRK08269         78 ADADLVFEAV--------------PEVLDAKREALRWLGRHVDADAII--ASTTSTFLVTDLQ----RHVA-HPERFLNA  136 (314)
T ss_pred             ccCCEEEECC--------------cCCHHHHHHHHHHHHhhCCCCcEE--EEccccCCHHHHH----hhcC-CcccEEEE
Confidence            9999999985              677888999999999998 56654  8888776653322    2222 35678776


Q ss_pred             c
Q 018618          187 T  187 (353)
Q Consensus       187 t  187 (353)
                      .
T Consensus       137 H  137 (314)
T PRK08269        137 H  137 (314)
T ss_pred             e
Confidence            4

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.27  E-value=0.0019  Score=61.74  Aligned_cols=67  Identities=25%  Similarity=0.250  Sum_probs=47.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +||+|||+ |.+|..++..|...|...+|.++|+++. ...+   ....  .....   ..+.++++++||+||++.
T Consensus         7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a---~~~g--~~~~~---~~~~~~~~~~aDvViiav   74 (307)
T PRK07502          7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARA---RELG--LGDRV---TTSAAEAVKGADLVILCV   74 (307)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH---HhCC--CCcee---cCCHHHHhcCCCEEEECC
Confidence            58999998 9999999999998886558999998752 1111   1111  11111   134567789999999985

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=97.25  E-value=0.0016  Score=63.53  Aligned_cols=110  Identities=21%  Similarity=0.238  Sum_probs=73.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEE----eCCCchhhhhCCCcEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF----LGQPQLENALTGMDLVI  114 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~~ADiVI  114 (353)
                      ++.++.|+||+|++|.+++..|.+.+...+|.++|.... ...-.+.... ....++..    ....+...|+.++ .|+
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~-~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGF-RSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcc-cCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            345899999999999999999999886669999998762 1111111110 01222221    1224567899999 666


Q ss_pred             EcCCCC-CCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCC
Q 018618          115 IPAGVP-RKPGM-TRDDLFNINAGIVRTLCEGIAKCCPN  151 (353)
Q Consensus       115 i~ag~~-~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~  151 (353)
                      +.+..+ ....+ .+......|++..+.+.+.+.+.+-+
T Consensus        81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~  119 (361)
T KOG1430|consen   81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK  119 (361)
T ss_pred             EeccccCccccccchhhheeecchhHHHHHHHHHHhCCC
Confidence            654432 22233 36667789999999999999988643

>PRK07326 short chain dehydrogenase; Provisional

Probab=97.23  E-value=0.0077  Score=54.48  Aligned_cols=114  Identities=18%  Similarity=0.171  Sum_probs=65.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~  108 (353)
                      ++|.|+||+|.+|++++..|+..|.  +|+++++++  ......++...   ..+..+.. -+|   +.+++       .
T Consensus         7 ~~ilItGatg~iG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (237)
T PRK07326          7 KVALITGGSKGIGFAIAEALLAEGY--KVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAAFG   81 (237)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCC--EEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999998887  899999876  22223334321   12222111 112   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHhh--CCCcEEEEecCC
Q 018618          109 GMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEGIAKC--CPNATVNLISNP  160 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r~---~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNP  160 (353)
                      +.|+||..+|.....   ..+..   +.+..|+.....+.+.+.+.  ...+.++++|..
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (237)
T PRK07326         82 GLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSL  141 (237)
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECCh
Confidence            789999998754221   12222   33555666555555554332  133556666543

>PRK08655 prephenate dehydrogenase; Provisional

Probab=97.23  E-value=0.0029  Score=63.70  Aligned_cols=66  Identities=24%  Similarity=0.374  Sum_probs=47.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+||||+|.+|..++..|...|+  +|.++|.++...  .++.... .  +..   +++..+++.+||+||++.
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~--~V~v~~r~~~~~--~~~a~~~-g--v~~---~~~~~e~~~~aDvVIlav   66 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGF--EVIVTGRDPKKG--KEVAKEL-G--VEY---ANDNIDAAKDADIVIISV   66 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCC--EEEEEECChHHH--HHHHHHc-C--Cee---ccCHHHHhccCCEEEEec
Confidence            6899998669999999999998887  899999875221  1111110 1  121   246678899999999985

>PLN02688 pyrroline-5-carboxylate reductase

Probab=97.22  E-value=0.0018  Score=60.51  Aligned_cols=95  Identities=15%  Similarity=0.270  Sum_probs=59.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEE-eCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLY-DVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~-D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |||++||. |.+|..++..|...++  ..+|+++ |+++..  ...+...  .  +...   .+..+++++||+||++. 
T Consensus         1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~--~~~~~~~--g--~~~~---~~~~e~~~~aDvVil~v-   69 (266)
T PLN02688          1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPAR--RDVFQSL--G--VKTA---ASNTEVVKSSDVIILAV-   69 (266)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHH--HHHHHHc--C--CEEe---CChHHHHhcCCEEEEEE-
Confidence            79999998 9999999999998875  4578888 765422  2223321  1  2221   34567789999999985 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      .|               +.+.++.+.+..+. |+.++|..++...
T Consensus        70 ~~---------------~~~~~vl~~l~~~~~~~~~iIs~~~g~~   99 (266)
T PLN02688         70 KP---------------QVVKDVLTELRPLLSKDKLLVSVAAGIT   99 (266)
T ss_pred             Cc---------------HHHHHHHHHHHhhcCCCCEEEEecCCCc
Confidence            12               12344444554443 5666665555443

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=97.21  E-value=0.0037  Score=57.36  Aligned_cols=152  Identities=13%  Similarity=0.129  Sum_probs=80.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~  108 (353)
                      |+|.|+||+|.+|..++..|...|.  +|+++|+++.  .....++.     ..+..+. .-+|   .+++       +.
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~i~~~~~~~~~~~~   73 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERLQELKDELG-----DNLYIAQLDVRNRAAIEEMLASLPAEWR   73 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhc-----cceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999998887  8999998752  11111111     1111111 0112   2222       24


Q ss_pred             CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~--~~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      +.|+||..+|...  .+  ..+.   .+.+..|+.....+.+.+..+.   ..+.++++|......            ++
T Consensus        74 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~------------~~  141 (248)
T PRK10538         74 NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSW------------PY  141 (248)
T ss_pred             CCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCC------------CC
Confidence            7999999988532  11  1222   2345666666444444443322   234566665432211            12


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +....++.+......+-..+++.++  +..|++.++
T Consensus       142 ~~~~~Y~~sK~~~~~~~~~l~~~~~--~~~i~v~~v  175 (248)
T PRK10538        142 AGGNVYGATKAFVRQFSLNLRTDLH--GTAVRVTDI  175 (248)
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHhc--CCCcEEEEE
Confidence            3333455533222334455555553  444554444

>PRK07680 late competence protein ComER; Validated

Probab=97.21  E-value=0.0021  Score=60.50  Aligned_cols=97  Identities=16%  Similarity=0.216  Sum_probs=62.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||+|||+ |.+|..++..|...+.  ..++.++|++...  ...+.+.  ...+...   .+..+++.++|+||++.. 
T Consensus         1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~--~~~~~~~--~~g~~~~---~~~~~~~~~aDiVilav~-   71 (273)
T PRK07680          1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAK--AYHIKER--YPGIHVA---KTIEEVISQSDLIFICVK-   71 (273)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHH--HHHHHHH--cCCeEEE---CCHHHHHHhCCEEEEecC-
Confidence            58999998 9999999999988873  2479999987522  1222221  1123322   345677899999999851 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      |               ..+.++++.+..+- ++.+|+.+++++.
T Consensus        72 p---------------~~~~~vl~~l~~~l~~~~~iis~~ag~~  100 (273)
T PRK07680         72 P---------------LDIYPLLQKLAPHLTDEHCLVSITSPIS  100 (273)
T ss_pred             H---------------HHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence            1               11344445555443 5678888888774

>PRK06482 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0087  Score=55.72  Aligned_cols=113  Identities=12%  Similarity=-0.001  Sum_probs=65.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCch---hhh-------hCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQL---ENA-------LTGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~a-------l~~A  110 (353)
                      ++|.|+||+|++|++++..|+..|.  .+++++.+...  ..++.... ...+..+.. -+|.   +++       +.+.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~--~v~~~~r~~~~--~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   77 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD--RVAATVRRPDA--LDDLKARY-GDRLWVLQLDVTDSAAVRAVVDRAFAALGRI   77 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc-cCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3799999999999999999999887  88888876411  11121111 112222111 1222   122       3457


Q ss_pred             cEEEEcCCCCCCCC-C--C---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          111 DLVIIPAGVPRKPG-M--T---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       111 DiVIi~ag~~~~~g-~--~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      |+||+++|...... .  +   ....+..|+.....+.+.+..+   ...+.++++|.
T Consensus        78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS  135 (276)
T PRK06482         78 DVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSS  135 (276)
T ss_pred             CEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcC
Confidence            99999998653211 1  1   2334567877777777776332   22345555543

>PRK12937 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.0076  Score=54.76  Aligned_cols=147  Identities=14%  Similarity=0.080  Sum_probs=80.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC----CCchhhhh------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG----QPQLENAL------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al------  107 (353)
                      .++|.|+||+|.+|++++..|++.|.  ++++++.+.   ......++....  ..+..+..    ..++++++      
T Consensus         5 ~~~vlItG~~~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          5 NKVAIVTGASRGIGAAIARRLAADGF--AVAVNYAGSAAAADELVAEIEAAG--GRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999998  777777644   122223333221  22222211    11223333      


Q ss_pred             -CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          108 -TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~---g---~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                       .+.|+||..+|.....   .   +.....+..|+.....+.+.+.+. .+.+.++++|.....            .+.|
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~------------~~~~  148 (245)
T PRK12937         81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIA------------LPLP  148 (245)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecccc------------CCCC
Confidence             3689999998864211   1   112334567766666656555443 245566666542211            1233


Q ss_pred             CCceEeechhhHHHHHHHHHHHhC
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      ....++.+......+-..+++.++
T Consensus       149 ~~~~Y~~sK~a~~~~~~~~a~~~~  172 (245)
T PRK12937        149 GYGPYAASKAAVEGLVHVLANELR  172 (245)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhh
Confidence            334455543333344555666553

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=97.16  E-value=0.0031  Score=59.65  Aligned_cols=107  Identities=17%  Similarity=0.115  Sum_probs=66.9

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HH-HHHHHhcCCCCCeEEEEeC----CCchhhhhC--CCcEEE
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG-VTADISHMDTGAVVRGFLG----QPQLENALT--GMDLVI  114 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~-~~~dl~~~~~~~~v~~~~~----t~d~~~al~--~ADiVI  114 (353)
                      ||.|+||+|++|+.++..|.+.+.  +++++|.... .. ....+.+.   ..+..+..    ..+++++++  +.|+||
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~--~V~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGH--EVVVLDNLSNGSPEALKRGERI---TRVTFVEGDLRDRELLDRLFEEHKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCC--eEEEEeCCCccchhhhhhhccc---cceEEEECCCCCHHHHHHHHHhCCCcEEE
Confidence            689999999999999999999887  8888886431 11 11111111   01222111    123334443  689999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018618          115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATV  154 (353)
Q Consensus       115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v  154 (353)
                      .++|.....  .....+.+..|+.....+++.+.+.....+|
T Consensus        76 ~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v  117 (328)
T TIGR01179        76 HFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFI  117 (328)
T ss_pred             ECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEE
Confidence            998854321  1233455678999999999988876544333

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.16  E-value=0.00075  Score=55.57  Aligned_cols=72  Identities=21%  Similarity=0.255  Sum_probs=46.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC--CCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ||+|+||+|++|..++..|...+.+.-+.+++.....|....-.+.  .....+....  .+ .+.+.++|+|+.+.
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~Dvvf~a~   74 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD-PEELSDVDVVFLAL   74 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS-GHHHTTESEEEE-S
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc-hhHhhcCCEEEecC
Confidence            7999999999999999999997777667777766523322211111  1112333321  34 36689999999985

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK07814 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.014  Score=54.14  Aligned_cols=155  Identities=15%  Similarity=0.147  Sum_probs=85.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hh-------h
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA-------L  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a-------l  107 (353)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|++.  ......++....  ..+..+. .-++.+   ++       +
T Consensus        10 ~~~vlItGasggIG~~~a~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814         10 DQVAVVTGAGRGLGAAIALAFAEAGA--DVLIAARTESQLDEVAEQIRAAG--RRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999887  999999875  222333333211  2222211 112321   12       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|+||..+|.....   ..+   ..+.+..|......+.+.+.    +..+.+.++++|.-....            +
T Consensus        86 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~  153 (263)
T PRK07814         86 GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRL------------A  153 (263)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccC------------C
Confidence            3689999998853211   112   23345566665555555544    334456666666432211            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+...++..+.  + .+.+..+
T Consensus       154 ~~~~~~Y~~sK~a~~~~~~~~~~e~~--~-~i~v~~i  187 (263)
T PRK07814        154 GRGFAAYGTAKAALAHYTRLAALDLC--P-RIRVNAI  187 (263)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHC--C-CceEEEE
Confidence            23333455543333445566666654  2 3544444

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.15  E-value=0.0028  Score=60.18  Aligned_cols=72  Identities=22%  Similarity=0.295  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +..||+|+|+ |.+|.+++..|...|. .+|.++|++.  +++.+.++.+..  +..... ...+++++++++|+||.+
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~-~~I~I~nR~~~ka~~la~~l~~~~--~~~~~~-~~~~~~~~~~~aDiVIna  199 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGV-ERLTIFDVDPARAAALADELNARF--PAARAT-AGSDLAAALAAADGLVHA  199 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHhhC--CCeEEE-eccchHhhhCCCCEEEEC
Confidence            4468999999 9999999999998885 4799999986  445555554432  222222 123445678999999998

>PRK06180 short chain dehydrogenase; Provisional

Probab=97.13  E-value=0.011  Score=55.30  Aligned_cols=114  Identities=13%  Similarity=0.089  Sum_probs=65.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~  109 (353)
                      .++|.|+||+|.+|++++..|+..|.  +|++++++....  .++.... ...+..+. .-+|   ..+++       ..
T Consensus         4 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~   78 (277)
T PRK06180          4 MKTWLITGVSSGFGRALAQAALAAGH--RVVGTVRSEAAR--ADFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGP   78 (277)
T ss_pred             CCEEEEecCCChHHHHHHHHHHhCcC--EEEEEeCCHHHH--HHHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            34799999999999999999999887  899999875211  1222211 11121111 1122   22222       35


Q ss_pred             CcEEEEcCCCCCC---CCCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          110 MDLVIIPAGVPRK---PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       110 ADiVIi~ag~~~~---~g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      .|+||.++|....   ...+.   ...+..|+.....+.+.+..+   ...+.+|++|.
T Consensus        79 ~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS  137 (277)
T PRK06180         79 IDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITS  137 (277)
T ss_pred             CCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEec
Confidence            8999999986421   11222   234667777666666664432   12345666554

>PRK09135 pteridine reductase; Provisional

Probab=97.13  E-value=0.012  Score=53.47  Aligned_cols=147  Identities=14%  Similarity=0.106  Sum_probs=82.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      ++|.|+||+|++|++++..|+..|.  +|+++|.+.   ......++.+... ..+..+. .-+|   ...++       
T Consensus         7 ~~vlItGa~g~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          7 KVALITGGARRIGAAIARTLHAAGY--RVAIHYHRSAAEADALAAELNALRP-GSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhhcC-CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999887  899999754   2222233432211 1122111 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCC--CC-C---CHHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          108 TGMDLVIIPAGVPRK--PG-M---TRDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~--~g-~---~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      ...|+||.++|....  .. .   +..+.+..|+.....+.+.+..+-  ..+.++..+.    .        .....++
T Consensus        84 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~----~--------~~~~~~~  151 (249)
T PRK09135         84 GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITD----I--------HAERPLK  151 (249)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeC----h--------hhcCCCC
Confidence            257999999885321  11 1   234456778777777777665432  1234433322    1        0112344


Q ss_pred             CCceEeechhhHHHHHHHHHHHhC
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +...++.+......+-..+++.++
T Consensus       152 ~~~~Y~~sK~~~~~~~~~l~~~~~  175 (249)
T PRK09135        152 GYPVYCAAKAALEMLTRSLALELA  175 (249)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHC
Confidence            445566655544555566666663

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=97.12  E-value=0.0036  Score=59.72  Aligned_cols=95  Identities=19%  Similarity=0.229  Sum_probs=60.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||+|||. |.+|+.++..|...|+  +|.++|+++..  +..+.....    .......++.+.++++|+|+++.  |.
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~--~V~~~dr~~~~--~~~l~~~g~----~~~~s~~~~~~~~~~~dvIi~~v--p~   69 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGH--DCVGYDHDQDA--VKAMKEDRT----TGVANLRELSQRLSAPRVVWVMV--PH   69 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHHcCC----cccCCHHHHHhhcCCCCEEEEEc--Cc
Confidence            68999999 9999999999999887  99999987622  222322111    11111123334567899999974  10


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  161 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  161 (353)
                                    ..++++++.+.... ++.+||..||..
T Consensus        70 --------------~~~~~v~~~l~~~l~~g~ivid~st~~   96 (298)
T TIGR00872        70 --------------GIVDAVLEELAPTLEKGDIVIDGGNSY   96 (298)
T ss_pred             --------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence                          02444555555554 567777777654

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.11  E-value=0.0034  Score=58.67  Aligned_cols=96  Identities=14%  Similarity=0.160  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      +|||+|||+ |.+|..++..|...+. ..++.++|+++..  ...+.+. .  .+..   +++..+.+.++|+||++.. 
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~--~~~~~~~-~--g~~~---~~~~~~~~~~advVil~v~-   71 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEK--RAALAEE-Y--GVRA---ATDNQEAAQEADVVVLAVK-   71 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHH--HHHHHHh-c--CCee---cCChHHHHhcCCEEEEEcC-
Confidence            479999999 9999999999988773 2478999987521  1222221 0  1121   2345667899999999852 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                                     ...+.++++.+..+. +..|+..+|-+.
T Consensus        72 ---------------~~~~~~v~~~l~~~~-~~~vvs~~~gi~   98 (267)
T PRK11880         72 ---------------PQVMEEVLSELKGQL-DKLVVSIAAGVT   98 (267)
T ss_pred             ---------------HHHHHHHHHHHHhhc-CCEEEEecCCCC
Confidence                           112445555555443 456666667553

>PRK06924 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.0054  Score=56.09  Aligned_cols=34  Identities=18%  Similarity=0.167  Sum_probs=30.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ++|.|+||+|.+|+.++..|++.|.  +|++++.++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~--~V~~~~r~~   35 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGT--HVISISRTE   35 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCC--EEEEEeCCc
Confidence            4799999999999999999999987  899999865

>PRK07069 short chain dehydrogenase; Validated

Probab=97.11  E-value=0.027  Score=51.32  Aligned_cols=114  Identities=23%  Similarity=0.293  Sum_probs=66.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC-C--cHHHHHHHhcCCCCCe---EEE-EeCCCchh-------hhhC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAV---VRG-FLGQPQLE-------NALT  108 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~-~--~~~~~~dl~~~~~~~~---v~~-~~~t~d~~-------~al~  108 (353)
                      ||.|+||+|.+|.+++..|+..|.  +|+++|.+ .  ......++........   +.. .....+++       +.+.
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGA--KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMG   78 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            588999999999999999999887  89999987 3  2223333332211111   111 11111111       2235


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ..|+||..+|.....   ..+   ....+..|+.    ..+.+.+.+++... +.++++|.
T Consensus        79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~~ss  138 (251)
T PRK07069         79 GLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQP-ASIVNISS  138 (251)
T ss_pred             CccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC-cEEEEecC
Confidence            689999998864321   112   2334556766    66777777775543 45555554

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=97.11  E-value=0.018  Score=52.61  Aligned_cols=119  Identities=18%  Similarity=0.193  Sum_probs=69.2

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE--eCC-Cc----------
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--LGQ-PQ----------  102 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~--~~t-~d----------  102 (353)
                      ..+.++|.|+|++|++|.+++..|++.|.  +|+++|++.  ......++.+... ..+..+  ..+ .+          
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~   85 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGA--TVILLGRTEEKLEAVYDEIEAAGG-PQPAIIPLDLLTATPQNYQQLADT   85 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHhcCC-CCceEEEecccCCCHHHHHHHHHH
Confidence            34556899999999999999999999887  999999876  2333344543221 111111  000 01          


Q ss_pred             hhhhhCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          103 LENALTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      +.+.+...|+||..+|....  +  ..+.   ...+..|+.....+.+.+..+   .+...+++.|.
T Consensus        86 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss  152 (247)
T PRK08945         86 IEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSS  152 (247)
T ss_pred             HHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEcc
Confidence            22334568999999875321  1  2222   334566766555555544322   24455665554

>PRK05875 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.015  Score=54.04  Aligned_cols=159  Identities=18%  Similarity=0.136  Sum_probs=85.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------  108 (353)
                      .++|.|+||+|.+|++++..|++.|.  +|++++.+.  ......++........+..+. .-+|   .+..++      
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGA--AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999998  899999865  222333333211111222211 1112   222333      


Q ss_pred             -CCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 -GMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 -~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                       ..|++|..+|....  +  ..+.   .+.+..|......+.+.+.++   ...+.++++|.....            ..
T Consensus        85 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~------------~~  152 (276)
T PRK05875         85 GRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAAS------------NT  152 (276)
T ss_pred             CCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhc------------CC
Confidence             67999999875321  1  1222   234455666666665544433   234566665542210            11


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+......+-..+++.++  +..+++.++.
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~~i~  188 (276)
T PRK05875        153 HRWFGAYGVTKSAVDHLMKLAADELG--PSWVRVNSIR  188 (276)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhc--ccCeEEEEEe
Confidence            22222344444444455566666664  3456655554

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=97.11  E-value=0.011  Score=53.90  Aligned_cols=115  Identities=17%  Similarity=0.206  Sum_probs=66.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------  107 (353)
                      .++|.|+||+|++|+.++..|++.|.  +|+++|.+.  ......++....  ..+..+.. -.|   .++++       
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGA--KVAVFDLNREAAEKVAADIRAKG--GNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999988  899999876  222233343221  12222111 112   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ...|+||+.+|.....   ..+.   ...+..|+.....+.+.+..+   .+...+++++.
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss  139 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIAS  139 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECc
Confidence            3589999998753211   1122   234566776666655555422   23345555554

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06914 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.025  Score=52.72  Aligned_cols=114  Identities=11%  Similarity=0.102  Sum_probs=63.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchhh---------hhCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLEN---------ALTG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~~---------al~~  109 (353)
                      +.+.|+||+|.+|++++..|+..|.  +|++++.+.  ......++.+......+..+. .-+|.++         .+..
T Consensus         4 k~~lItGasg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          4 KIAIVTGASSGFGLLTTLELAKKGY--LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            3689999999999999999999887  899998765  222222222211112222221 1123211         1245


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEec
Q 018618          110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  158 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t  158 (353)
                      .|+||.++|.....   +.+   ..+.+..|+.....+.+.    +++... +.++++|
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~vs  139 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKS-GKIINIS  139 (280)
T ss_pred             eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CEEEEEC
Confidence            79999998864311   112   223455666665555555    444333 3444444

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=97.10  E-value=0.007  Score=55.88  Aligned_cols=74  Identities=18%  Similarity=0.200  Sum_probs=48.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~  108 (353)
                      |++.|+||+|.+|..++..|++.|.  +|++.|+++  ......++.+..   .+..+. .-+|   .+++       +.
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~d~~~~~~~~~~~~~~~g   75 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGA--RVVISSRNEENLEKALKELKEYG---EVYAVKADLSDKDDLKNLVKEAWELLG   75 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC---CceEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            6899999999999999999999997  899999876  222333443211   111111 1112   2222       34


Q ss_pred             CCcEEEEcCCCC
Q 018618          109 GMDLVIIPAGVP  120 (353)
Q Consensus       109 ~ADiVIi~ag~~  120 (353)
                      .-|++|..+|..
T Consensus        76 ~id~li~naG~~   87 (259)
T PRK08340         76 GIDALVWNAGNV   87 (259)
T ss_pred             CCCEEEECCCCC
Confidence            689999998863

>PRK12828 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0051  Score=55.47  Aligned_cols=115  Identities=16%  Similarity=0.175  Sum_probs=65.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEE--EeCCCchhhhh-------CC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG--FLGQPQLENAL-------TG  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~--~~~t~d~~~al-------~~  109 (353)
                      .++|.|+||+|.+|+.++..|++.|.  +|+++|++..  .....++....  ..+..  .....++++++       ..
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGA--RVALIGRGAAPLSQTLPGVPADA--LRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCC--eEEEEeCChHhHHHHHHHHhhcC--ceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            35899999999999999999999987  8999998762  22223333221  11111  11111222222       36


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          110 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      .|+||..+|.....   ..+.   .+.+..|......+++.+.+.   .+...+++++.
T Consensus        83 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS  141 (239)
T PRK12828         83 LDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGA  141 (239)
T ss_pred             cCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECc
Confidence            89999998753211   1122   233456666555555555422   23445665554

>PRK05855 short chain dehydrogenase; Validated

Probab=97.09  E-value=0.02  Score=58.81  Aligned_cols=117  Identities=16%  Similarity=0.171  Sum_probs=68.5

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hh------
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA------  106 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a------  106 (353)
                      ...+++.|+||+|.+|.+++..|+..|.  +|++++++.  ....+.++....  ..+..+. .-+|.+   +.      
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGA--EVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3457899999999999999999999988  899999876  222333343221  1222211 112221   11      


Q ss_pred             -hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecC
Q 018618          107 -LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       107 -l~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  159 (353)
                       +...|++|..+|.....   ..+.   ...+..|+....    .+.+.+.+....+.|+++|.
T Consensus       389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS  452 (582)
T PRK05855        389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVAS  452 (582)
T ss_pred             hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence             23579999999875321   1222   233456654444    44445555444566666654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=97.09  E-value=0.0042  Score=56.83  Aligned_cols=113  Identities=12%  Similarity=0.206  Sum_probs=65.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      ++|.|+||+|.+|++++..|+..|.  +|+++|++.  ......++....  ..+..+. .-+|   ..+++       .
T Consensus         5 ~~vlItG~sg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          5 KVALVTGAASGIGLEIALALAKEGA--KVVIADLNDEAAAAAAEALQKAG--GKAIGVAMDVTDEEAINAGIDYAVETFG   80 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999887  999999876  223333443211  1222211 1112   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +.|+||..+|.....   ..+   ..+.+..|+..    .+.+.+.+++.. ...++++|.
T Consensus        81 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss  140 (258)
T PRK12429         81 GVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMAS  140 (258)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence            689999998754221   111   22334455555    555555555443 334554443

>PRK05876 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.013  Score=54.96  Aligned_cols=114  Identities=17%  Similarity=0.120  Sum_probs=65.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~  108 (353)
                      +.+.|+||+|.+|++++..|+..|.  +|++.|.+.  +.....++....  ..+..+.. -+|   +++++       .
T Consensus         7 k~vlVTGas~gIG~ala~~La~~G~--~Vv~~~r~~~~l~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          7 RGAVITGGASGIGLATGTEFARRGA--RVVLGDVDKPGLRQAVNHLRAEG--FDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999998  899999876  222333343221  22222111 112   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  159 (353)
                      ..|++|..+|.....   ..+.   ...+..|+.....+.+.    +.+....+.+++++.
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS  143 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTAS  143 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence            579999999864211   1222   23345665544444444    444443455666654

>PRK12827 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.02  Score=51.90  Aligned_cols=102  Identities=21%  Similarity=0.336  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c----HHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh---
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T----PGVTADISHMDTGAVVRGFLG-QPQ---LENAL---  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~----~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al---  107 (353)
                      .++|.|+||+|.+|+.++..|++.|.  ++++++...  .    .....++...  ...+..+.. -.|   .++++   
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          6 SRRVLITGGSGGLGRAIAVRLAADGA--DVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            46899999999999999999999888  889988643  1    1111222221  112222111 112   22222   


Q ss_pred             ----CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHH
Q 018618          108 ----TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA  146 (353)
Q Consensus       108 ----~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~  146 (353)
                          ...|+||..+|.....   ..+   ....+..|......+++.+.
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  130 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAAL  130 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence                4689999998864311   112   22345678887777777776

>PRK07806 short chain dehydrogenase; Provisional

Probab=97.09  E-value=0.0035  Score=57.22  Aligned_cols=114  Identities=16%  Similarity=0.203  Sum_probs=66.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      +++.|+||+|++|.+++..|+..|.  +|++++++.   ......++....  ..+..+. .-+|   .+.++       
T Consensus         7 k~vlItGasggiG~~l~~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          7 KTALVTGSSRGIGADTAKILAGAGA--HVVVNYRQKAPRANKVVAEIEAAG--GRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             cEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCchHhHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            5899999999999999999998887  888888754   122223343211  1222211 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                      .+.|+||..+|.......+....+..|......+++.+.++. ..+.++++|.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            368999998875322122223334566666667777776654 3455665553

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.08  E-value=0.015  Score=52.79  Aligned_cols=115  Identities=17%  Similarity=0.231  Sum_probs=66.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~  108 (353)
                      +++.|+|++|.+|.+++..|+..|.  +|++++++.  ......++...  ...+..+.. -++   +++++       .
T Consensus         8 ~~vlVtG~sg~iG~~l~~~L~~~G~--~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (239)
T PRK07666          8 KNALITGAGRGIGRAVAIALAKEGV--NVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNELG   83 (239)
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999887  899999876  22222334321  123332211 112   22233       3


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCC
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  160 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  160 (353)
                      +.|+||.++|.....   ..+.   ...+..|+.....+.+.+..+   ...+.+++++..
T Consensus        84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~  144 (239)
T PRK07666         84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISST  144 (239)
T ss_pred             CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcch
Confidence            789999998864321   1222   234566666555555554432   123445555543

>PRK08278 short chain dehydrogenase; Provisional

Probab=97.08  E-value=0.024  Score=52.93  Aligned_cols=158  Identities=15%  Similarity=0.147  Sum_probs=88.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---------HHHHHHHhcCCCCCeEEEE----eCCCchhhhh-
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGF----LGQPQLENAL-  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---------~~~~~dl~~~~~~~~v~~~----~~t~d~~~al-  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++++++..         ...+.++....  ..+..+    ....+.+..+ 
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          7 KTLFITGASRGIGLAIALRAARDGA--NIVIAAKTAEPHPKLPGTIHTAAEEIEAAG--GQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEecccccccchhhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHH
Confidence            4799999999999999999999987  8999997641         11222332211  122211    1111222223 


Q ss_pred             ------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHH
Q 018618          108 ------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVF  172 (353)
Q Consensus       108 ------~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~  172 (353)
                            ...|++|+++|.....   ..+.   ...+..|+.....+.+.+..+   ...+.++++|.+....        
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--------  154 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLD--------  154 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcc--------
Confidence                  3679999998863211   1222   233456666555555555432   2346666666433211        


Q ss_pred             HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                        ...++..-.++.+.....++-..+++.++  +..|++..+.
T Consensus       155 --~~~~~~~~~Y~~sK~a~~~~~~~la~el~--~~~I~v~~i~  193 (273)
T PRK08278        155 --PKWFAPHTAYTMAKYGMSLCTLGLAEEFR--DDGIAVNALW  193 (273)
T ss_pred             --ccccCCcchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEEe
Confidence              01123345567765555667778888775  3456555443

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=97.07  E-value=0.0024  Score=60.51  Aligned_cols=63  Identities=16%  Similarity=0.256  Sum_probs=46.3

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ||+|||. |.+|+.++..|+..|+  +|.++|+++..  ...+....  .  ..   .++.++++++||+||++.
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~--~V~~~dr~~~~--~~~~~~~g--~--~~---~~~~~~~~~~aDivi~~v   63 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGY--QLHVTTIGPEV--ADELLAAG--A--VT---AETARQVTEQADVIFTMV   63 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHCC--C--cc---cCCHHHHHhcCCEEEEec
Confidence            6999999 9999999999999887  99999987621  12223221  1  11   235568899999999984

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=97.06  E-value=0.026  Score=51.45  Aligned_cols=156  Identities=15%  Similarity=0.168  Sum_probs=83.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hh-------hhhCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LE-------NALTG  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~-------~al~~  109 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|++++.+........+....  ..+..+. .-++   .+       +.+..
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         5 GKVALVTGANTGLGQGIAVGLAEAGA--DIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35899999999999999999999998  899999765322222333221  1222111 1112   11       12246


Q ss_pred             CcEEEEcCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHHh----hCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          110 MDLVIIPAGVPRKPG---M---TRDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       110 ADiVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      .|++|..+|......   .   ...+.+..|+.....+.+.+..    ....+.+++++.-...            .+.+
T Consensus        81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~~~  148 (248)
T TIGR01832        81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSF------------QGGI  148 (248)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhc------------cCCC
Confidence            899999988642111   1   2234456676655555555433    2224566665542110            1112


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ..-.++.+......+.+.+++.+.  +..|++.++
T Consensus       149 ~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v  181 (248)
T TIGR01832       149 RVPSYTASKHGVAGLTKLLANEWA--AKGINVNAI  181 (248)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhC--ccCcEEEEE
Confidence            222344443333345666777763  444544333

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=97.05  E-value=0.0031  Score=59.88  Aligned_cols=64  Identities=19%  Similarity=0.273  Sum_probs=46.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||. |.+|+.++..|...|+  +|.++|+++...  ..+....    ...   .+++++++++||+||++.
T Consensus         3 ~~IgviG~-G~mG~~~a~~l~~~g~--~v~~~d~~~~~~--~~~~~~g----~~~---~~~~~e~~~~~d~vi~~v   66 (296)
T PRK11559          3 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVYDRNPEAV--AEVIAAG----AET---ASTAKAVAEQCDVIITML   66 (296)
T ss_pred             ceEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHH--HHHHHCC----Cee---cCCHHHHHhcCCEEEEeC
Confidence            58999998 9999999999998887  899999876221  1122111    111   245678889999999984

>PRK06172 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.011  Score=54.16  Aligned_cols=156  Identities=13%  Similarity=0.090  Sum_probs=83.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCC---chhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~---d~~~al~------  108 (353)
                      .++|.|+||+|.+|..++..|++.|.  +|++++.++  ......++....  ..+..+. .-+   +.+++++      
T Consensus         7 ~k~ilItGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          7 GKVALVTGGAAGIGRATALAFAREGA--KVVVADRDAAGGEETVALIREAG--GEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999998887  899999876  222333343321  2222211 112   2223333      


Q ss_pred             -CCcEEEEcCCCCCCC----CCCHH---HHHHHHHHHHHHHHH----HHHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          109 -GMDLVIIPAGVPRKP----GMTRD---DLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~----g~~r~---~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                       ..|+||..+|.....    ..+..   +.+..|+.....+.+    .+.+. ..+.++++|.....            .
T Consensus        83 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~ii~~sS~~~~------------~  149 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQ-GGGAIVNTASVAGL------------G  149 (253)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEECchhhc------------c
Confidence             459999998864221    22222   334566655544433    33322 23455555542211            1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +.+..-.++.+......+-+.+++.+.  +..+++..+.
T Consensus       150 ~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~~i~v~~i~  186 (253)
T PRK06172        150 AAPKMSIYAASKHAVIGLTKSAAIEYA--KKGIRVNAVC  186 (253)
T ss_pred             CCCCCchhHHHHHHHHHHHHHHHHHhc--ccCeEEEEEE
Confidence            222223344443333456666777663  4456555443

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.05  E-value=0.0073  Score=54.33  Aligned_cols=33  Identities=33%  Similarity=0.438  Sum_probs=30.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   76 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~   76 (353)
                      .||+|+|+ |.+|+.++..|+..|. .+++|+|.+
T Consensus        22 ~~V~IvG~-GglGs~ia~~La~~Gv-g~i~lvD~D   54 (200)
T TIGR02354        22 ATVAICGL-GGLGSNVAINLARAGI-GKLILVDFD   54 (200)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCC-CEEEEECCC
Confidence            39999999 9999999999999987 489999988

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.05  E-value=0.011  Score=55.01  Aligned_cols=117  Identities=17%  Similarity=0.191  Sum_probs=66.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      ..+|.|+||+|.+|..++..|+..|.  +|+++|++.  ......++....  ..+..+. .-+|   .++++       
T Consensus         9 ~k~ilItGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          9 GKNVVVVGGTSGINLGIAQAFARAGA--NVAVASRSQEKVDAAVAQLQQAG--PEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34899999999999999999998887  899999865  222223333211  1111110 1112   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecCCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPV  161 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNPv  161 (353)
                      ...|++|..+|.....   ..+.   ...+..|+.....+.+.+..+  .+++.++++|.+.
T Consensus        85 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~  146 (264)
T PRK07576         85 GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQ  146 (264)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChh
Confidence            3569999988743211   1222   233456666655555554432  1346677776643

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.0094  Score=55.19  Aligned_cols=152  Identities=14%  Similarity=0.111  Sum_probs=80.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~  108 (353)
                      +++.|+||+|.+|..++..|+..|.  +|++.|++..  .....++.     ..+..+. .-+|   .+++       +.
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          7 KVAIVTGGATLIGAAVARALVAAGA--RVAIVDIDADNGAAVAASLG-----ERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999998  9999998752  22222221     1111111 1112   2222       24


Q ss_pred             CCcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          109 GMDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~--g~~r---~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      ..|++|..+|.....  ..+.   ...+..|+.....+.+.+..+  .+.+.+++++.-....            +.+..
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~~~  147 (261)
T PRK08265         80 RVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKF------------AQTGR  147 (261)
T ss_pred             CCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhcc------------CCCCC
Confidence            679999998864221  1222   233455665544444443322  3456666665422111            12222


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      -.++.+......+-+.++..+.  +..|++..+
T Consensus       148 ~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v  178 (261)
T PRK08265        148 WLYPASKAAIRQLTRSMAMDLA--PDGIRVNSV  178 (261)
T ss_pred             chhHHHHHHHHHHHHHHHHHhc--ccCEEEEEE
Confidence            2344443333455566666653  344554444

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=97.03  E-value=0.0039  Score=57.50  Aligned_cols=112  Identities=15%  Similarity=0.083  Sum_probs=64.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe----C-CCchhhhh-CCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----G-QPQLENAL-TGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~----~-t~d~~~al-~~ADiV  113 (353)
                      +++||.|+||+|++|+.++..|+..|+  +|+++.++....... +..   ...+..+.    . ..++.+++ .++|+|
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~-~~~---~~~~~~~~~Dl~d~~~~l~~~~~~~~d~v   89 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF--AVKAGVRDVDKAKTS-LPQ---DPSLQIVRADVTEGSDKLVEAIGDDSDAV   89 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC--EEEEEecCHHHHHHh-ccc---CCceEEEEeeCCCCHHHHHHHhhcCCCEE
Confidence            357999999999999999999998887  788777654211111 111   11121111    1 12344566 689999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      |.++|.....+.  ...+..|......+++.+.+....-+|.+.|.
T Consensus        90 i~~~g~~~~~~~--~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         90 ICATGFRRSFDP--FAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             EECCCCCcCCCC--CCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            998775322111  11123444556677777766544333433333

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=97.03  E-value=0.0063  Score=55.22  Aligned_cols=113  Identities=20%  Similarity=0.325  Sum_probs=64.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhh-------hh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------AL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~-------al  107 (353)
                      .+++.|+||+|.+|+.++..|++.|.  .+++.+.+.  +.....++.     ..+..+. .-+|   +++       .+
T Consensus         6 ~~~vlItGa~g~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T PRK12936          6 GRKALVTGASGGIGEEIARLLHAQGA--IVGLHGTRVEKLEALAAELG-----ERVKIFPANLSDRDEVKALGQKAEADL   78 (245)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC-----CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999887  788887764  222222221     1111111 1112   111       13


Q ss_pred             CCCcEEEEcCCCCCCC---C---CCHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCC
Q 018618          108 TGMDLVIIPAGVPRKP---G---MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNP  160 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g---~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNP  160 (353)
                      ...|+||..+|.....   .   .+....+..|+.....+++.+.+.   .+.+.+++++..
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~  140 (245)
T PRK12936         79 EGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSV  140 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCH
Confidence            4689999998864211   1   122344566766655555554322   234566666653

>PRK07832 short chain dehydrogenase; Provisional

Probab=97.03  E-value=0.058  Score=50.15  Aligned_cols=118  Identities=19%  Similarity=0.176  Sum_probs=66.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCch----------hhhhCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL----------ENALTG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~----------~~al~~  109 (353)
                      +++.|+||+|.+|..++..|+..|.  +|++++.++  ......++..............-+|.          .+.+..
T Consensus         1 k~vlItGas~giG~~la~~la~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA--ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            3799999999999999999999887  899999875  22223333322111111000011121          122356


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecCCC
Q 018618          110 MDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIA----KCCPNATVNLISNPV  161 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tNPv  161 (353)
                      .|+||..+|.....   ..+.   ...+..|+.....+++.+.    +....+.+++++...
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~  140 (272)
T PRK07832         79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA  140 (272)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence            89999998864211   1222   2345666665555555543    223345666666543

>TIGR01746 Thioester-redct thioester reductase domain

Probab=97.02  E-value=0.0089  Score=57.39  Aligned_cols=111  Identities=13%  Similarity=0.040  Sum_probs=69.8

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHH-----HHHHhcC-----CCC-CeEEEEeCC----------C
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-----TADISHM-----DTG-AVVRGFLGQ----------P  101 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~-----~~dl~~~-----~~~-~~v~~~~~t----------~  101 (353)
                      +|.|+||+|++|++++..|+..|...+|+++.+......     ...+...     ... ..+..+.+.          .
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            588999999999999999998875447888887652111     1111110     000 234333221          1


Q ss_pred             chhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018618          102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV  154 (353)
Q Consensus       102 d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v  154 (353)
                      ++.+..+++|+||.+++... ......++...|+.....+++.+.+.....++
T Consensus        81 ~~~~~~~~~d~vih~a~~~~-~~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v  132 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVN-WVYPYSELRAANVLGTREVLRLAASGRAKPLH  132 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEec-cCCcHHHHhhhhhHHHHHHHHHHhhCCCceEE
Confidence            24455688999999987542 12334556678999899998888776544333

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK07063 short chain dehydrogenase; Provisional

Probab=97.02  E-value=0.027  Score=51.86  Aligned_cols=157  Identities=18%  Similarity=0.175  Sum_probs=83.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|.++  ......++........+..+. .-+|   .++++       
T Consensus         7 ~k~vlVtGas~gIG~~~a~~l~~~G~--~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          7 GKVALVTGAAQGIGAAIARAFAREGA--AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            34799999999999999999999987  899999876  233333443311112222211 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|++|..+|.... +  ..+   ....+..|+.....+.+.    +.+. ..+.|+++|......            +
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------~  151 (260)
T PRK07063         85 GPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIASTHAFK------------I  151 (260)
T ss_pred             CCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECChhhcc------------C
Confidence            368999999985421 1  112   223345565554444444    4332 345666665432111            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+++.+.  +..|++..+
T Consensus       152 ~~~~~~Y~~sKaa~~~~~~~la~el~--~~gIrvn~v  186 (260)
T PRK07063        152 IPGCFPYPVAKHGLLGLTRALGIEYA--ARNVRVNAI  186 (260)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence            22222344443333455666777663  445554444

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.01  E-value=0.038  Score=50.53  Aligned_cols=101  Identities=22%  Similarity=0.230  Sum_probs=58.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEe-CCCchh---h-------hh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQLE---N-------AL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~t~d~~---~-------al  107 (353)
                      ++|.|+||+|.+|++++..|++.|.  +++++|.+..   .....++....  .++..+. .-+|.+   +       .+
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~--~vi~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF--DLAINDRPDDEELAATQQELRALG--VEVIFFPADVADLSAHEAMLDAAQAAW   78 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecCchhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999987  8999997542   11222232211  1222211 112221   1       12


Q ss_pred             CCCcEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHH
Q 018618          108 TGMDLVIIPAGVPRK---P--GMTR---DDLFNINAGIVRTLCEGIA  146 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~---~--g~~r---~~~~~~N~~i~~~i~~~i~  146 (353)
                      ...|+||+++|.+..   +  ..+.   .+.+..|+.....+.+.+.
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  125 (256)
T PRK12745         79 GRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVA  125 (256)
T ss_pred             CCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHH
Confidence            468999999986421   1  1122   2345666666555555443

>PRK06181 short chain dehydrogenase; Provisional

Probab=97.00  E-value=0.014  Score=53.70  Aligned_cols=115  Identities=16%  Similarity=0.163  Sum_probs=67.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~  108 (353)
                      ++|.|+||+|.+|..++..|+..|.  +|+++|++.  .+....++....  ..+..+. .-+|.   ++++       .
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   77 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA--QLVLAARNETRLASLAQELADHG--GEALVVPTDVSDAEACERLIEAAVARFG   77 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999998887  899999876  222233343322  2222211 11222   2222       3


Q ss_pred             CCcEEEEcCCCCCCCC---C-CH---HHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCC
Q 018618          109 GMDLVIIPAGVPRKPG---M-TR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISNP  160 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~-~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNP  160 (353)
                      +.|+||.++|......   . +.   ...+..|+.....+.+.+..+-  ..+.++++|..
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~  138 (263)
T PRK06181         78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSL  138 (263)
T ss_pred             CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            6899999987543211   1 22   2335667766666666654322  23556665543

>PLN02996 fatty acyl-CoA reductase

Probab=97.00  E-value=0.012  Score=60.21  Aligned_cols=120  Identities=16%  Similarity=0.113  Sum_probs=73.2

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCC----cH-HHHHHHhcCC------------C----CCeEE
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN----TP-GVTADISHMD------------T----GAVVR   95 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~----~~-~~~~dl~~~~------------~----~~~v~   95 (353)
                      |-+.+.|.|+||+|++|++++..|+.. +-..+|.++.+..    .. ....++....            .    ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            445568999999999999999887764 4455777777644    11 1111111100            0    02333


Q ss_pred             EEeCC----------Cc-hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618           96 GFLGQ----------PQ-LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus        96 ~~~~t----------~d-~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                      .+.+.          .+ +++.++++|+||++|+... ......+....|+....++++.+.+.. ...+|.+.|
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~-~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST  161 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN-FDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVST  161 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHhCCCEEEECccccC-CcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEee
Confidence            33221          11 3456689999999987543 233455677889999999999887652 333444443

>PRK06545 prephenate dehydrogenase; Validated

Probab=97.00  E-value=0.0059  Score=59.87  Aligned_cols=68  Identities=22%  Similarity=0.260  Sum_probs=46.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +||+|||. |.+|.+++..|...|+  ++.++|.+.............   ....  .++++++++++||+||++.
T Consensus         1 ~~I~iIG~-GliG~siA~~L~~~G~--~v~i~~~~~~~~~~~~a~~~~---~~~~--~~~~~~~~~~~aDlVilav   68 (359)
T PRK06545          1 RTVLIVGL-GLIGGSLALAIKAAGP--DVFIIGYDPSAAQLARALGFG---VIDE--LAADLQRAAAEADLIVLAV   68 (359)
T ss_pred             CeEEEEEe-CHHHHHHHHHHHhcCC--CeEEEEeCCCHHHHHHHhcCC---CCcc--cccCHHHHhcCCCEEEEeC
Confidence            37999999 9999999999999987  778888776221111111111   1111  1246678889999999985

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.99  E-value=0.023  Score=51.65  Aligned_cols=115  Identities=14%  Similarity=0.202  Sum_probs=67.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------  107 (353)
                      .++|.|+||+|.+|+.++..|++.|.  ++++++.++  ......++....  ..+..+. .-+|.   ++++       
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   82 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGA--TVAFNDGLAAEARELAAALEAAG--GRAHAIAADLADPASVQRFFDAAAAAL   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999887  899998765  222333443221  2222221 11221   1222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      .+.|+||..+|.....   ..+.   ...+..|......+.+.+..+   .+.+.++++|.
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS  143 (250)
T PRK12939         83 GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLAS  143 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECc
Confidence            5789999998864321   1122   233456766666666555433   22456666654

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0083  Score=55.30  Aligned_cols=34  Identities=38%  Similarity=0.376  Sum_probs=31.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ++|.|+||+|.+|..++..|++.|.  +|+++|.+.
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~--~v~~~~r~~   36 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGA--TLGLVARRT   36 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            5899999999999999999999887  899999875

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0095  Score=54.59  Aligned_cols=113  Identities=20%  Similarity=0.329  Sum_probs=65.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEE-eCCCc---hhhh-------hC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGF-LGQPQ---LENA-------LT  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~-~~t~d---~~~a-------l~  108 (353)
                      .++|.|+||+|.+|++++..|++.|.  +|++++++.. .....++..    ..+..+ ..-+|   .++.       +.
T Consensus        15 ~k~vlItGas~~IG~~la~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   88 (255)
T PRK06841         15 GKVAVVTGGASGIGHAIAELFAAKGA--RVALLDRSEDVAEVAAQLLG----GNAKGLVCDVSDSQSVEAAVAAVISAFG   88 (255)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhhC----CceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            35899999999999999999999887  8999998752 222222221    111111 01112   2222       23


Q ss_pred             CCcEEEEcCCCCCC-CC--CC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRK-PG--MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-~g--~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ..|+||..+|.... +.  .+   ....+..|+.....+.+.+..+   ...+.++++|.
T Consensus        89 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  148 (255)
T PRK06841         89 RIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLAS  148 (255)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            67999999886421 11  11   2234566766666666665543   22455665554

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=96.97  E-value=0.0084  Score=55.04  Aligned_cols=118  Identities=13%  Similarity=0.122  Sum_probs=68.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-C---CCchhhhh------
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-G---QPQLENAL------  107 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~---t~d~~~al------  107 (353)
                      +.++|.|+||+|.+|+.++..|+..|.  +|+++|+++  ......++....  ..+..+. .   ..++..++      
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA--HVLVNGRNAATLEAAVAALRAAG--GAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence            346899999999999999999998887  899999876  233333443221  1122211 1   11222222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCC
Q 018618          108 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPV  161 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv  161 (353)
                       ...|+||..+|.....   ..+   ....+..|+.....+.+.+.++   ...+.+++++...
T Consensus        86 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~  149 (256)
T PRK06124         86 HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIA  149 (256)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeech
Confidence             3458999998853211   112   2234566766555555444332   2345666666543

>PF11975 Glyco_hydro_4C: Family 4 glycosyl hydrolase C-terminal domain; InterPro: IPR022616 This domain is found primarily in bacterial family 4 glycosyl hydrolases

Probab=96.97  E-value=0.0054  Score=56.35  Aligned_cols=71  Identities=8%  Similarity=0.014  Sum_probs=47.5

Q ss_pred             HHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 018618          274 KFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGI  348 (353)
Q Consensus       274 ~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~  348 (353)
                      .++++|.++.+   .++.++ -++|.+   |+|.++++||+|+++|+.++.. ++|++..++++......-+-.++.++
T Consensus       141 ~~i~~i~~~~~---~~~~vNv~N~G~I~nLp~davVEvp~~v~~~Gi~P~~~-g~lP~~~~~li~~~~~~e~L~veAa~  215 (232)
T PF11975_consen  141 AAIEAIYNDKP---KRFVVNVPNNGAIPNLPDDAVVEVPCYVDGDGIHPVAV-GPLPPAIAGLIQQVKAYERLTVEAAL  215 (232)
T ss_dssp             HHHHHHHHSSE---EEEEEEEE-TTSSTTS-TTSEEEEEEEEETTEEEEB-S-B---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCC---eEEEEECCCCCccCCCCCCcEEEEEEEEcCCeeEeccC-CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            44445576654   355454 578885   8899999999999999999776 69999999988876666555555544

It is found in the C terminus. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 1UP4_A 1UP6_C 1UP7_E 1VJT_A 1U8X_X 1S6Y_A 3FEF_D 1OBB_A.

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.95  E-value=0.011  Score=54.46  Aligned_cols=69  Identities=10%  Similarity=0.185  Sum_probs=45.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+||+|||+ |.+|..++..+...+.  ..+++.++.+.. ....++.+..   .+..   ++|+++.++++|+||++.
T Consensus         4 ~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~---~~~~---~~~~~~~~~~~DiViiav   74 (245)
T PRK07634          4 KHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNV-EKLDQLQARY---NVST---TTDWKQHVTSVDTIVLAM   74 (245)
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCH-HHHHHHHHHc---CcEE---eCChHHHHhcCCEEEEec
Confidence            579999998 9999999998887652  334777876431 1122232211   1222   245678889999999984

>PRK07856 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.013  Score=53.69  Aligned_cols=141  Identities=11%  Similarity=0.073  Sum_probs=79.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe----CCCchhhhh-------CC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENAL-------TG  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al-------~~  109 (353)
                      .+++.|+||+|.+|..++..|+..|.  +|+++|.+...    ....    ..+..+.    ...+.++++       ..
T Consensus         6 ~k~~lItGas~gIG~~la~~l~~~g~--~v~~~~r~~~~----~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          6 GRVVLVTGGTRGIGAGIARAFLAAGA--TVVVCGRRAPE----TVDG----RPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCChhh----hhcC----CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35899999999999999999999887  89999986522    1111    1111111    111233333       34


Q ss_pred             CcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHh----hCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          110 MDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       110 ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      .|+||..+|.... +  ..+   ....+..|+.....+.+.+..    ....+.+|++|.-....            +.+
T Consensus        76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~  143 (252)
T PRK07856         76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRR------------PSP  143 (252)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCC------------CCC
Confidence            5999999885321 1  111   234456676666666655543    22335666666432211            122


Q ss_pred             CCceEeechhhHHHHHHHHHHHhC
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      ..-.++.+......+-+.++..++
T Consensus       144 ~~~~Y~~sK~a~~~l~~~la~e~~  167 (252)
T PRK07856        144 GTAAYGAAKAGLLNLTRSLAVEWA  167 (252)
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhc
Confidence            233444444334456666777765

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.03  Score=51.24  Aligned_cols=116  Identities=16%  Similarity=0.151  Sum_probs=67.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhh-------h
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------A  106 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~-------a  106 (353)
                      ..++|.|+||+|.+|++++..|+..|.  +|+++|+++  ......++....  ..+..+. .-+|   ++.       .
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA--DVVLAARTAERLDEVAAEIDDLG--RRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhC--CceEEEecCCCCHHHHHHHHHHHHHH
Confidence            346899999999999999999999998  899999876  222233333211  1111111 1122   212       2


Q ss_pred             hCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618          107 LTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  159 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  159 (353)
                      +...|+||+.+|....  +  ..+.   ...+..|+.....+.+.+..+-  ....+|++|.
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS  141 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINS  141 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence            2468999999886321  1  2222   3345667666666666665431  1245666554

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.012  Score=53.62  Aligned_cols=110  Identities=19%  Similarity=0.154  Sum_probs=65.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      ++|.|+||+|.+|++++..|+..|.  +|++++++..  .....++   .  ..+..+. ...|.          .+.+.
T Consensus         7 k~vlItGasg~iG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          7 KTALITGGTSGIGLETARQFLAEGA--RVAITGRDPASLEAARAEL---G--ESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHh---C--CceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999987  8999998751  1111111   1  1121111 11222          12234


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                      +.|+||..+|.....   ..+   ....+..|+.....+.+.+..+- ..+.+++++
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~  136 (249)
T PRK06500         80 RLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNG  136 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence            689999998864321   112   22456778877777777776531 223444443

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=96.92  E-value=0.0044  Score=59.47  Aligned_cols=120  Identities=22%  Similarity=0.241  Sum_probs=72.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHH---HHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTA---DISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~---dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|+|+ |.||+.++..|.+.|.  ++.++-+.+. +....   .+.+.......... .+++ .+....+|+||++.
T Consensus         1 mkI~IlGa-GAvG~l~g~~L~~~g~--~V~~~~R~~~~~~l~~~GL~i~~~~~~~~~~~~-~~~~-~~~~~~~Dlviv~v   75 (307)
T COG1893           1 MKILILGA-GAIGSLLGARLAKAGH--DVTLLVRSRRLEALKKKGLRIEDEGGNFTTPVV-AATD-AEALGPADLVIVTV   75 (307)
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEecHHHHHHHHhCCeEEecCCCccccccc-cccC-hhhcCCCCEEEEEe
Confidence            79999999 9999999999999983  6666665442 11111   11111110111111 1223 46678999999986


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce-Eeechh
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL-LGVTML  189 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv-iG~t~l  189 (353)
                      ...+                ..+..+.+..+. |+++|+..=|=.+..-     .+++.  ++.+++ .|+|..
T Consensus        76 Ka~q----------------~~~al~~l~~~~~~~t~vl~lqNG~g~~e-----~l~~~--~~~~~il~G~~~~  126 (307)
T COG1893          76 KAYQ----------------LEEALPSLAPLLGPNTVVLFLQNGLGHEE-----ELRKI--LPKETVLGGVTTH  126 (307)
T ss_pred             cccc----------------HHHHHHHhhhcCCCCcEEEEEeCCCcHHH-----HHHHh--CCcceEEEEEeee
Confidence            3221                456677777776 6778887778887663     23332  455555 467543

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=96.92  E-value=0.005  Score=62.52  Aligned_cols=100  Identities=15%  Similarity=0.165  Sum_probs=62.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC--CCCCeEEEEeCCCchhhhhC---CCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTGAVVRGFLGQPQLENALT---GMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al~---~ADiVIi~  116 (353)
                      .+|+|||. |.+|+++|..|+..|+  +|.++|+++..  +.++...  .....+..   ..+++++++   ++|+|++.
T Consensus         2 ~~IgvIGL-G~MG~~lA~nL~~~G~--~V~v~dr~~~~--~~~l~~~~~~~g~~i~~---~~s~~e~v~~l~~~d~Iil~   73 (470)
T PTZ00142          2 SDIGLIGL-AVMGQNLALNIASRGF--KISVYNRTYEK--TEEFVKKAKEGNTRVKG---YHTLEELVNSLKKPRKVILL   73 (470)
T ss_pred             CEEEEEeE-hHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHhhhhcCCccee---cCCHHHHHhcCCCCCEEEEE
Confidence            58999999 9999999999999998  99999987622  1222211  00112222   346666665   58988886


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCch
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNST  164 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~  164 (353)
                      ...               .+.++++++.+..+ .|+.+||..||-....
T Consensus        74 v~~---------------~~~v~~vi~~l~~~L~~g~iIID~gn~~~~d  107 (470)
T PTZ00142         74 IKA---------------GEAVDETIDNLLPLLEKGDIIIDGGNEWYLN  107 (470)
T ss_pred             eCC---------------hHHHHHHHHHHHhhCCCCCEEEECCCCCHHH
Confidence            311               12344444555444 3677888887754333

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.015  Score=52.97  Aligned_cols=145  Identities=19%  Similarity=0.145  Sum_probs=79.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCC-eEEE-EeCCCchhhhhCC----CcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA-VVRG-FLGQPQLENALTG----MDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~-~v~~-~~~t~d~~~al~~----ADiVIi  115 (353)
                      .++.|+||+|.+|..++..|+..|.  +|+++|+++...  .++....... .+.. .....+.+++++.    .|.+|+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~   77 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW--QVIACGRNQSVL--DELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIF   77 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC--EEEEEECCHHHH--HHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEE
Confidence            4789999999999999999999887  899999875211  1121111001 1111 1111233333333    477888


Q ss_pred             cCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeech
Q 018618          116 PAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM  188 (353)
Q Consensus       116 ~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~  188 (353)
                      .+|.....   ..+.   ...+..|+.....+.+.+..+- +...+++++......            +.+..-.++.+.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~------------~~~~~~~Y~asK  145 (240)
T PRK06101         78 NAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASEL------------ALPRAEAYGASK  145 (240)
T ss_pred             cCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhcc------------CCCCCchhhHHH
Confidence            77643211   1222   3456778877777777766542 345556555422111            233333455554


Q ss_pred             hhHHHHHHHHHHHh
Q 018618          189 LDVVRANTFVAEVL  202 (353)
Q Consensus       189 ld~~R~~~~lA~~l  202 (353)
                      .....+.+.++..+
T Consensus       146 ~a~~~~~~~l~~e~  159 (240)
T PRK06101        146 AAVAYFARTLQLDL  159 (240)
T ss_pred             HHHHHHHHHHHHHH
Confidence            44445666666544

>PRK08507 prephenate dehydrogenase; Validated

Probab=96.90  E-value=0.0071  Score=56.90  Aligned_cols=66  Identities=23%  Similarity=0.343  Sum_probs=44.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||. |.+|..++..|...|+..+|+.+|+++..  ...+.....   ...   ..++.+ +.+||+||++.
T Consensus         1 m~I~iIG~-G~mG~sla~~l~~~g~~~~v~~~d~~~~~--~~~~~~~g~---~~~---~~~~~~-~~~aD~Vilav   66 (275)
T PRK08507          1 MKIGIIGL-GLMGGSLGLALKEKGLISKVYGYDHNELH--LKKALELGL---VDE---IVSFEE-LKKCDVIFLAI   66 (275)
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCCEEEEEcCCHHH--HHHHHHCCC---Ccc---cCCHHH-HhcCCEEEEeC
Confidence            58999998 99999999999988865588999987521  111222111   111   124444 45699999985

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=96.88  E-value=0.017  Score=52.15  Aligned_cols=113  Identities=17%  Similarity=0.262  Sum_probs=67.2

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG  109 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~  109 (353)
                      |.|+|++|.+|+.++..|++.|+  ++++++.+.   ......++.+..  ..+.... .-+|   +++++       ..
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA--KVIITYRSSEEGAEEVVEELKAYG--VKALGVVCDVSDREDVKAVVEEIEEELGP   76 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999987  899998764   222333343322  1222111 1112   22333       34


Q ss_pred             CcEEEEcCCCCCCC---CC---CHHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCC
Q 018618          110 MDLVIIPAGVPRKP---GM---TRDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNP  160 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~---~r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNP  160 (353)
                      .|+||..+|.....   +.   .....+..|+.....+.+.+..+.   ....++++|..
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~  136 (239)
T TIGR01830        77 IDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSV  136 (239)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCc
Confidence            69999998864211   11   233456778887777777776542   23456666553

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.88  E-value=0.0075  Score=56.93  Aligned_cols=100  Identities=17%  Similarity=0.113  Sum_probs=62.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||+|||+ |.+|..++..|...+.  ..+|+++|.+... ....+...  ...+..   +++..++++++|+||++..
T Consensus         1 m~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~-~~~~l~~~--~~~~~~---~~~~~e~~~~aDvVilavp   73 (277)
T PRK06928          1 MEKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNE-HFNQLYDK--YPTVEL---ADNEAEIFTKCDHSFICVP   73 (277)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHH-HHHHHHHH--cCCeEE---eCCHHHHHhhCCEEEEecC
Confidence            368999998 9999999999988772  2488999986521 12222211  112222   2355677899999999852


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  163 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  163 (353)
                                      ...+.++++.+..+- ++..||.+.+-++.
T Consensus        74 ----------------p~~~~~vl~~l~~~l~~~~~ivS~~aGi~~  103 (277)
T PRK06928         74 ----------------PLAVLPLLKDCAPVLTPDRHVVSIAAGVSL  103 (277)
T ss_pred             ----------------HHHHHHHHHHHHhhcCCCCEEEEECCCCCH
Confidence                            122445666665544 45566666665543

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=96.88  E-value=0.0056  Score=58.37  Aligned_cols=64  Identities=20%  Similarity=0.313  Sum_probs=47.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +||+|||. |.+|..++..|+..|+  +|.++|+++..  ..++....    ..   ...++.+++++||+||++.
T Consensus         2 ~~Ig~IGl-G~mG~~mA~~l~~~G~--~V~v~d~~~~~--~~~~~~~g----~~---~~~s~~~~~~~aDvVi~~v   65 (296)
T PRK15461          2 AAIAFIGL-GQMGSPMASNLLKQGH--QLQVFDVNPQA--VDALVDKG----AT---PAASPAQAAAGAEFVITML   65 (296)
T ss_pred             CeEEEEee-CHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHcC----Cc---ccCCHHHHHhcCCEEEEec
Confidence            48999999 9999999999999887  89999987622  22232211    11   1235567889999999984

>PRK06182 short chain dehydrogenase; Validated

Probab=96.88  E-value=0.011  Score=54.98  Aligned_cols=113  Identities=13%  Similarity=0.112  Sum_probs=64.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhC-------CCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT-------GMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~-------~ADi  112 (353)
                      .++|.|+||+|.+|..++..|.+.|.  +|++.+++...  ..++..... ..+.. .....+.+++++       +.|+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~--l~~~~~~~~-~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGY--TVYGAARRVDK--MEDLASLGV-HPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHhCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            35899999999999999999999887  89999986521  112221111 11111 111122333333       7899


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          113 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +|+.+|.....   ..+   ....+..|...    ++.+.+.+++... +.+++++.
T Consensus        78 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS  133 (273)
T PRK06182         78 LVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRS-GRIINISS  133 (273)
T ss_pred             EEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcc
Confidence            99999864211   111   23344556544    5556666665543 45555553

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=96.88  E-value=0.0023  Score=54.34  Aligned_cols=118  Identities=17%  Similarity=0.181  Sum_probs=71.4

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC---CC--CeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---TG--AVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~---~~--~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |+|+|+ |.+|..+|..|.+.+.  ++.+++..+ ......-....   ..  ..+.......+.......+|+||++..
T Consensus         1 I~I~G~-GaiG~~~a~~L~~~g~--~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGA-GAIGSLYAARLAQAGH--DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEEST-SHHHHHHHHHHHHTTC--EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SS
T ss_pred             CEEECc-CHHHHHHHHHHHHCCC--ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcchhccCCCcEEEEEec
Confidence            789999 9999999999999888  999999865 22211111110   01  112221111222246799999999853


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-ch
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TM  188 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~  188 (353)
                      ...                ..+.++.++.+. |++.|+.+-|=++..-.     +.+.  +|+.++++- +.
T Consensus        77 a~~----------------~~~~l~~l~~~~~~~t~iv~~qNG~g~~~~-----l~~~--~~~~~v~~g~~~  125 (151)
T PF02558_consen   77 AYQ----------------LEQALQSLKPYLDPNTTIVSLQNGMGNEEV-----LAEY--FPRPRVLGGVTT  125 (151)
T ss_dssp             GGG----------------HHHHHHHHCTGEETTEEEEEESSSSSHHHH-----HHCH--STGSGEEEEEEE
T ss_pred             ccc----------------hHHHHHHHhhccCCCcEEEEEeCCCCcHHH-----HHHH--cCCCcEEEEEEe
Confidence            211                345666677776 67788888887775532     2232  566688654 54

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=96.87  E-value=0.0056  Score=60.41  Aligned_cols=53  Identities=19%  Similarity=0.354  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+||+|||+.|.+|..++..|...|+  +|.++|.+..                      ++.++++++||+||++.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~--~V~~~d~~~~----------------------~~~~~~~~~aDlVilav  150 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGY--QVRILEQDDW----------------------DRAEDILADAGMVIVSV  150 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCC--eEEEeCCCcc----------------------hhHHHHHhcCCEEEEeC
Confidence            36999999559999999999999987  8999997420                      13457789999999985

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=96.87  E-value=0.012  Score=53.53  Aligned_cols=114  Identities=18%  Similarity=0.277  Sum_probs=66.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC----CCchhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al-------  107 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|++++++.  ......++....  ..+..+..    ..++++.+       
T Consensus         6 ~~~ilItGasg~iG~~l~~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          6 GRVALVTGAARGIGRAIAVRLAADGA--EVIVVDICGDDAAATAELVEAAG--GKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            45899999999999999999999887  899999875  222223333221  22332211    11222222       


Q ss_pred             CCCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIA----KCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN  159 (353)
                      ...|+||.++|.... +  ..+.   .+.+..|+.....+.+.+.    +.. ...++++|.
T Consensus        82 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss  142 (251)
T PRK12826         82 GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSS  142 (251)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEec
Confidence            368999999875421 1  2222   2345666666665655543    333 345555543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=96.86  E-value=0.06  Score=49.59  Aligned_cols=155  Identities=15%  Similarity=0.125  Sum_probs=93.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCC-eEEEEeCC-------CchhhhhCCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQ-------PQLENALTGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~-~v~~~~~t-------~d~~~al~~AD  111 (353)
                      +-+.|+||++-+|...|..|.+.|.  .|+|..++.  ++.++.++.+....+ .+... ..       ....+.+...|
T Consensus         7 kv~lITGASSGiG~A~A~~l~~~G~--~vvl~aRR~drL~~la~~~~~~~~~~~~~DVt-D~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           7 KVALITGASSGIGEATARALAEAGA--KVVLAARREERLEALADEIGAGAALALALDVT-DRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             cEEEEecCcchHHHHHHHHHHHCCC--eEEEEeccHHHHHHHHHhhccCceEEEeeccC-CHHHHHHHHHHHHHhhCccc
Confidence            3578889999999999999999999  999999987  566666666411111 11110 00       11334567899


Q ss_pred             EEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          112 LVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       112 iVIi~ag~~~~~g------~~r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      ++|..||......      .+...++..|+..+......    +.+. ..+.||+.+.-....            -||-.
T Consensus        84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiAG~~------------~y~~~  150 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIAGRY------------PYPGG  150 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEeccccccc------------cCCCC
Confidence            9999999754321      13556778887766655544    4432 356788877644322            25666


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+++-|.-...-|...|-+.+  ....|++..|
T Consensus       151 ~vY~ATK~aV~~fs~~LR~e~--~g~~IRVt~I  181 (246)
T COG4221         151 AVYGATKAAVRAFSLGLRQEL--AGTGIRVTVI  181 (246)
T ss_pred             ccchhhHHHHHHHHHHHHHHh--cCCCeeEEEe
Confidence            777765433322333332222  2355554444

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=96.86  E-value=0.001  Score=63.01  Aligned_cols=98  Identities=23%  Similarity=0.273  Sum_probs=59.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||.|+||+|++|+++...|...++  +++.++..+     .|+.+...   +      .++-+. .+.|+||++++...
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~--~v~~~~r~~-----~dl~d~~~---~------~~~~~~-~~pd~Vin~aa~~~   63 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGY--EVIATSRSD-----LDLTDPEA---V------AKLLEA-FKPDVVINCAAYTN   63 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSE--EEEEESTTC-----S-TTSHHH---H------HHHHHH-H--SEEEE------
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCC--EEEEeCchh-----cCCCCHHH---H------HHHHHH-hCCCeEeccceeec
Confidence            8999999999999999999998887  888887653     12222110   0      011122 25899999987542


Q ss_pred             CC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          122 KP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       122 ~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..  ..........|......+++...+.  ++.+|.+|
T Consensus        64 ~~~ce~~p~~a~~iN~~~~~~la~~~~~~--~~~li~~S  100 (286)
T PF04321_consen   64 VDACEKNPEEAYAINVDATKNLAEACKER--GARLIHIS  100 (286)
T ss_dssp             HHHHHHSHHHHHHHHTHHHHHHHHHHHHC--T-EEEEEE
T ss_pred             HHhhhhChhhhHHHhhHHHHHHHHHHHHc--CCcEEEee
Confidence            11  1234556678999999999998865  45555544

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.86  E-value=0.0064  Score=58.97  Aligned_cols=91  Identities=15%  Similarity=0.185  Sum_probs=59.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ..++|+|||. |.+|+.+|..|...|.  +|+.+|++....  .+.        +..   ..++++++++||+|++....
T Consensus       145 ~g~~VgIIG~-G~IG~~vA~~L~~~G~--~V~~~d~~~~~~--~~~--------~~~---~~~l~ell~~aDiVil~lP~  208 (330)
T PRK12480        145 KNMTVAIIGT-GRIGAATAKIYAGFGA--TITAYDAYPNKD--LDF--------LTY---KDSVKEAIKDADIISLHVPA  208 (330)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCChhHh--hhh--------hhc---cCCHHHHHhcCCEEEEeCCC
Confidence            4469999999 9999999999987777  999999865210  010        111   24678899999999997421


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      .           ..+...+.  .+.+....|++++|+++-
T Consensus       209 t-----------~~t~~li~--~~~l~~mk~gavlIN~aR  235 (330)
T PRK12480        209 N-----------KESYHLFD--KAMFDHVKKGAILVNAAR  235 (330)
T ss_pred             c-----------HHHHHHHh--HHHHhcCCCCcEEEEcCC
Confidence            1           11112221  122333347889988873

>PRK12746 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.046  Score=49.98  Aligned_cols=114  Identities=16%  Similarity=0.156  Sum_probs=64.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEe-CCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D-~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------  108 (353)
                      ++|.|+||+|.+|++++..|++.|.  ++++.+ ++.  ......++....  ..+..+. .-+|   ..++++      
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          7 KVALVTGASRGIGRAIAMRLANDGA--LVAIHYGRNKQAADETIREIESNG--GKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            5899999999999999999998887  776654 433  122222232111  1122111 1122   222222      


Q ss_pred             -------CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          109 -------GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       109 -------~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                             +.|+||+++|......   .+   ....+..|+.....+.+.+..+. ..+.++++|.
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS  147 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISS  147 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence                   6899999998643211   12   13345577777777777666543 2345555543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=96.85  E-value=0.023  Score=52.28  Aligned_cols=115  Identities=14%  Similarity=0.136  Sum_probs=68.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCchh---hh-------h
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQLE---NA-------L  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a-------l  107 (353)
                      .++|.|+||+|.+|++++..|+..|.  +|+++|.+..  .....++....  ..+..+. .-+|.+   ++       +
T Consensus        12 ~k~ilItGa~g~IG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~i~~~~--~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213         12 GKTALVTGGSRGLGLQIAEALGEAGA--RVVLSARKAEELEEAAAHLEALG--IDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999887  8999998652  22222232211  1222211 112321   11       2


Q ss_pred             CCCcEEEEcCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHHhh----CCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKPG---M---TRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tN  159 (353)
                      ...|+||+++|......   .   .....+..|+.....+.+.+..+    .+.+.++++|.
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS  149 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVAS  149 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence            46799999988532111   1   12345667888777777766554    23455666654

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=96.85  E-value=0.0077  Score=57.02  Aligned_cols=65  Identities=20%  Similarity=0.258  Sum_probs=48.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +||++||- |.+|+.+|..|...|+  ++..+|+++.+. +..+....  .  ..   ..++.++.++||+||...
T Consensus         1 ~kIafIGL-G~MG~pmA~~L~~aG~--~v~v~~r~~~ka-~~~~~~~G--a--~~---a~s~~eaa~~aDvVitmv   65 (286)
T COG2084           1 MKIAFIGL-GIMGSPMAANLLKAGH--EVTVYNRTPEKA-AELLAAAG--A--TV---AASPAEAAAEADVVITML   65 (286)
T ss_pred             CeEEEEcC-chhhHHHHHHHHHCCC--EEEEEeCChhhh-hHHHHHcC--C--cc---cCCHHHHHHhCCEEEEec
Confidence            58999998 9999999999999998  999999986432 22233211  1  11   124468899999999974

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.84  E-value=0.0057  Score=51.95  Aligned_cols=74  Identities=23%  Similarity=0.297  Sum_probs=49.6

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .+.++|+|+|+ |.+|..++..|...+ ..++.++|.+..  ...+.++....  ....    ..+.++.++++|+||.+
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g-~~~v~v~~r~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELG-AAKIVIVNRTLEKAKALAERFGELG--IAIA----YLDLEELLAEADLIINT   88 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCC-CCEEEEEcCCHHHHHHHHHHHhhcc--ccee----ecchhhccccCCEEEeC
Confidence            34569999999 999999999998876 348999998762  22232332110  0111    13455668999999998


Q ss_pred             CCCC
Q 018618          117 AGVP  120 (353)
Q Consensus       117 ag~~  120 (353)
                      ....
T Consensus        89 ~~~~   92 (155)
T cd01065          89 TPVG   92 (155)
T ss_pred             cCCC
Confidence            6543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06138 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.035  Score=50.61  Aligned_cols=113  Identities=19%  Similarity=0.191  Sum_probs=63.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .+++.|+||+|.+|++++..|++.|.  ++++++.+..  .....++. .  ...+..+. .-+|   .++++       
T Consensus         5 ~k~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          5 GRVAIVTGAGSGIGRATAKLFAREGA--RVVVADRDAEAAERVAAAIA-A--GGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC--eEEEecCCHHHHHHHHHHHh-c--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999887  8999998752  22222232 1  12222221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  159 (353)
                      .+.|+||..+|.....   ..+.   ...+..|......+.+.    +++. ....++++|.
T Consensus        80 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS  140 (252)
T PRK06138         80 GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQ-GGGSIVNTAS  140 (252)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-CCeEEEEECC
Confidence            3789999998864211   1222   22355666655444444    3333 3345555544

>PRK06128 oxidoreductase; Provisional

Probab=96.83  E-value=0.031  Score=53.02  Aligned_cols=115  Identities=23%  Similarity=0.256  Sum_probs=68.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEe-CCCc---hhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------  105 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~-------  105 (353)
                      .++|.|+||+|.+|.+++..|+..|.  +|++.+.+.    .......+....  ..+..+. .-+|   .++       
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGA--DIALNYLPEEEQDAAEVVQLIQAEG--RKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999887  888876543    112222233221  1222111 1112   122       


Q ss_pred             hhCCCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          106 ALTGMDLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       106 al~~ADiVIi~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                      .+...|++|..+|...  .+  ..+   ....+..|+.....+++.+..+- +.+.+|+++.
T Consensus       131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS  192 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGS  192 (300)
T ss_pred             HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECC
Confidence            2346899999998642  11  122   33456778877777777776553 3456666654

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.83  E-value=0.027  Score=51.37  Aligned_cols=154  Identities=16%  Similarity=0.186  Sum_probs=83.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCchh---h-------hh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQLE---N-------AL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~~---~-------al  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++.+..  ..+..+ ..-+|.+   +       .+
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (250)
T PRK07774          6 DKVAIVTGAAGGIGQAYAEALAREGA--SVVVADINAEGAERVAKQIVADG--GTAIAVQVDVSDPDSAKAMADATVSAF   81 (250)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999887  899999875  222222333221  111111 1112321   1       12


Q ss_pred             CCCcEEEEcCCCCCC----C--CCCH---HHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          108 TGMDLVIIPAGVPRK----P--GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~----~--g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      ...|+||+++|....    +  ..+.   .+.+..|+.....+.+.+..+.   +.+.++++|.-..             
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-------------  148 (250)
T PRK07774         82 GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA-------------  148 (250)
T ss_pred             CCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc-------------
Confidence            468999999986321    1  1222   2345667766666666665442   2345666553111             


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                        +++.-.++.+......+-+.+++.+.  ...+.+.++.
T Consensus       149 --~~~~~~Y~~sK~a~~~~~~~l~~~~~--~~~i~v~~v~  184 (250)
T PRK07774        149 --WLYSNFYGLAKVGLNGLTQQLARELG--GMNIRVNAIA  184 (250)
T ss_pred             --cCCccccHHHHHHHHHHHHHHHHHhC--ccCeEEEEEe
Confidence              11222345543333445566666653  3345544443

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.014  Score=54.40  Aligned_cols=111  Identities=15%  Similarity=0.030  Sum_probs=61.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LTGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~~A  110 (353)
                      ++|.|+||+|.+|++++..|++.|.  +|++.+.+....  .++.+.. ...+..+. .-+|   .++.       +...
T Consensus         4 k~vlItGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          4 KVWFITGASRGFGRAWTEAALERGD--RVVATARDTATL--ADLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999998887  899999865211  1111110 01111110 1112   1111       2467


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEec
Q 018618          111 DLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~t  158 (353)
                      |.||+++|.....   ..+   ....+..|+...    +.+.+.+++.... .++++|
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vs  135 (275)
T PRK08263         79 DIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG-HIIQIS  135 (275)
T ss_pred             CEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEc
Confidence            9999999865321   112   234456676654    4444445544333 455554

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=96.82  E-value=0.0094  Score=55.76  Aligned_cols=98  Identities=23%  Similarity=0.260  Sum_probs=63.5

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC-CCcEEEEcCCCCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVPRK  122 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~-~ADiVIi~ag~~~~  122 (353)
                      |+|+|++|+||+++...|...|+  +|..+-++......  ..+.    .+...   +.+.+... ++|+||..||.|-.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh--~v~iltR~~~~~~~--~~~~----~v~~~---~~~~~~~~~~~DavINLAG~~I~   69 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGH--QVTILTRRPPKASQ--NLHP----NVTLW---EGLADALTLGIDAVINLAGEPIA   69 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCC--eEEEEEcCCcchhh--hcCc----ccccc---chhhhcccCCCCEEEECCCCccc
Confidence            67999999999999999999998  88888877622111  1111    11111   11223333 79999999997732


Q ss_pred             CC----CCHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 018618          123 PG----MTRDDLFNINAGIVRTLCEGIAKCCPNA  152 (353)
Q Consensus       123 ~g----~~r~~~~~~N~~i~~~i~~~i~~~~p~a  152 (353)
                      ..    .....+..--+...+.+.+.|.+.....
T Consensus        70 ~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P  103 (297)
T COG1090          70 ERRWTEKQKEEIRQSRINTTEKLVELIAASETKP  103 (297)
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCC
Confidence            22    1223444555778888899998766443

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.82  E-value=0.0057  Score=58.39  Aligned_cols=64  Identities=16%  Similarity=0.277  Sum_probs=44.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC---CcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~---ADiVIi~a  117 (353)
                      |||+|||. |.+|+.++..|...++  +|+++|+++..  +..+.+..    ...   ..++++.+++   +|+||++.
T Consensus         1 m~Ig~IGl-G~mG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~s~~~~~~~~~~advVi~~v   67 (299)
T PRK12490          1 MKLGLIGL-GKMGGNMAERLREDGH--EVVGYDVNQEA--VDVAGKLG----ITA---RHSLEELVSKLEAPRTIWVMV   67 (299)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHHhCCCCCEEEEEe
Confidence            58999998 9999999999998887  89999987522  12232211    111   2345566655   68998874

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.81  E-value=0.033  Score=52.63  Aligned_cols=115  Identities=14%  Similarity=0.152  Sum_probs=70.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------  107 (353)
                      .++|.|+||+|.+|++++..|++.|.  +|++++.+.   .......+...  ...+..+. .-+|   .++.+      
T Consensus        46 ~k~iLItGasggIG~~la~~l~~~G~--~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAKEGA--DIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999887  899999875   12222223221  12222211 1112   22222      


Q ss_pred             -CCCcEEEEcCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecC
Q 018618          108 -TGMDLVIIPAGVPRK--P--GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISN  159 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~--~--g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tN  159 (353)
                       ...|+||..+|....  +  ..+   ....+..|+.....+.+.+..+ .+.+.+|++|.
T Consensus       122 ~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS  182 (290)
T PRK06701        122 LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGS  182 (290)
T ss_pred             cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEec
Confidence             357999999885321  1  122   2345677888888888777654 34556666654

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=96.80  E-value=0.012  Score=62.43  Aligned_cols=90  Identities=19%  Similarity=0.169  Sum_probs=60.6

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh--CCCcEEEEc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIP  116 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al--~~ADiVIi~  116 (353)
                      .+.|||.|+||+|++|++++..|...|+  ++.. ...       |+.+.            ..+...+  .+.|+||++
T Consensus       378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~--~v~~-~~~-------~l~d~------------~~v~~~i~~~~pd~Vih~  435 (668)
T PLN02260        378 KPSLKFLIYGRTGWIGGLLGKLCEKQGI--AYEY-GKG-------RLEDR------------SSLLADIRNVKPTHVFNA  435 (668)
T ss_pred             CCCceEEEECCCchHHHHHHHHHHhCCC--eEEe-ecc-------ccccH------------HHHHHHHHhhCCCEEEEC
Confidence            3468999999999999999999988776  5421 110       01110            0011222  268999999


Q ss_pred             CCCCCCC--C---CCHHHHHHHHHHHHHHHHHHHHhhCC
Q 018618          117 AGVPRKP--G---MTRDDLFNINAGIVRTLCEGIAKCCP  150 (353)
Q Consensus       117 ag~~~~~--g---~~r~~~~~~N~~i~~~i~~~i~~~~p  150 (353)
                      |+....+  +   .+..+....|+....++++.+++.+.
T Consensus       436 Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~  474 (668)
T PLN02260        436 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL  474 (668)
T ss_pred             CcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC
Confidence            8764322  1   24456778999999999999998754

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=96.80  E-value=0.045  Score=49.82  Aligned_cols=114  Identities=12%  Similarity=0.189  Sum_probs=65.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------  107 (353)
                      .++.|+||+|.+|++++..|++.|.  ++++.+.+.   ......++.+..  .++..+.. -+|   ..+++       
T Consensus         7 ~~~lItG~s~~iG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          7 KVAIVTGGAKGIGKAITVALAQEGA--KVVINYNSSKEAAENLVNELGKEG--HDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEcCCcHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999998887  777665432   222223343221  22322211 122   22223       


Q ss_pred             CCCcEEEEcCCCCCCCC------CCHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKPG------MTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g------~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ...|+||+++|......      ....+.+..|+.....+.+.+..+   ...+.+++++.
T Consensus        83 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  143 (247)
T PRK12935         83 GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISS  143 (247)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence            34799999988643211      122344567776666666665543   23445555554

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.031  Score=51.77  Aligned_cols=111  Identities=15%  Similarity=0.137  Sum_probs=62.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC-------CCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-------GMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~-------~ADiVI  114 (353)
                      ++|.|+||+|.+|++++..|+..|.  +|++.+++......  ..+.. ....+. ....+++++++       ..|++|
T Consensus         5 ~~vlVtGasg~iG~~~a~~l~~~g~--~V~~~~r~~~~~~~--~~~~~-~~~~D~-~d~~~~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          5 KVALVTGASSGIGRATAEKLARAGY--RVFGTSRNPARAAP--IPGVE-LLELDV-TDDASVQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCChhhccc--cCCCe-eEEeec-CCHHHHHHHHHHHHHhCCCCCEEE
Confidence            4799999999999999999999887  89999986511100  01100 001111 11123334443       469999


Q ss_pred             EcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618          115 IPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  159 (353)
Q Consensus       115 i~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  159 (353)
                      .++|......   .+   ....+..|......+.+.    +++.. .+.++++|.
T Consensus        79 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS  132 (270)
T PRK06179         79 NNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISS  132 (270)
T ss_pred             ECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECC
Confidence            9998643211   11   234455665544444444    44433 345555554

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.78  E-value=0.022  Score=52.32  Aligned_cols=114  Identities=20%  Similarity=0.266  Sum_probs=66.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|+..|.  ++++.|.+.  ......++.+..  ..+..+. .-+|.   ++.       +.
T Consensus        10 k~~lItGas~giG~~ia~~L~~~G~--~vvl~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (254)
T PRK08085         10 KNILITGSAQGIGFLLATGLAEYGA--EIIINDITAERAELAVAKLRQEG--IKAHAAPFNVTHKQEVEAAIEHIEKDIG   85 (254)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999887  999999876  233333443321  1121111 11121   111       23


Q ss_pred             CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  159 (353)
                      ..|+||..+|.... +  ..+   ....+..|......+.+.+..+.   ..+.++++|.
T Consensus        86 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  145 (254)
T PRK08085         86 PIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICS  145 (254)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcc
Confidence            57999999886321 1  112   23345667655555555554432   3355666553

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.78  E-value=0.016  Score=54.70  Aligned_cols=69  Identities=14%  Similarity=0.189  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .|||+|||+ |.+|..++..|...+.  ..+|.++|++.. ....++....   .++..   .+..++.++||+||++.
T Consensus         3 ~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~-~~~~~l~~~~---g~~~~---~~~~e~~~~aDvVilav   73 (279)
T PRK07679          3 IQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE-TRLQELHQKY---GVKGT---HNKKELLTDANILFLAM   73 (279)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH-HHHHHHHHhc---CceEe---CCHHHHHhcCCEEEEEe
Confidence            479999998 9999999999988872  348899987541 1222332211   12222   34567789999999985

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.78  E-value=0.0076  Score=56.83  Aligned_cols=67  Identities=13%  Similarity=0.174  Sum_probs=46.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +||++||+ |.+|++++..|.+.++  ..+|..+|+++.  ....+.+.. .  +...   ++..+.+++||+||++.
T Consensus         3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~--~~~~l~~~~-g--~~~~---~~~~e~~~~aDiIiLav   71 (272)
T PRK12491          3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVS--NLKNASDKY-G--ITIT---TNNNEVANSADILILSI   71 (272)
T ss_pred             CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHH--HHHHHHHhc-C--cEEe---CCcHHHHhhCCEEEEEe
Confidence            58999998 9999999999998874  457999998652  122232211 1  2221   34456789999999985

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.77  E-value=0.029  Score=54.01  Aligned_cols=115  Identities=15%  Similarity=0.178  Sum_probs=65.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE--eCCCch-------hhhhC--
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--LGQPQL-------ENALT--  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~--~~t~d~-------~~al~--  108 (353)
                      ..+.|+||+|.+|.+++..|++.|.  +|+++|+++  ++....++........+..+  .-++|.       .+.+.  
T Consensus        54 ~~~lITGAs~GIG~alA~~La~~G~--~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~  131 (320)
T PLN02780         54 SWALVTGPTDGIGKGFAFQLARKGL--NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL  131 (320)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence            4799999999999999999999987  899999976  33334445432111122211  011121       12233  


Q ss_pred             CCcEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRK---P--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~---~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  159 (353)
                      +.|++|..+|....   +  ..+.   ...+..|+.....+.+.    +.+. ..+.++++|.
T Consensus       132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS  193 (320)
T PLN02780        132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGS  193 (320)
T ss_pred             CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEec
Confidence            45589999886421   1  1222   23455666555444444    4333 3455666554

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.77  E-value=0.0089  Score=53.80  Aligned_cols=74  Identities=22%  Similarity=0.340  Sum_probs=48.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----c--------------H--HHHHHHhcCCCCCeEEEEeCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----T--------------P--GVTADISHMDTGAVVRGFLGQ  100 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~--------------~--~~~~dl~~~~~~~~v~~~~~t  100 (353)
                      .||.|+|+ |.+|+.++..|+..|. .+|.++|.+.     +              +  ..+..+........+..+...
T Consensus        22 ~~VlviG~-GglGs~ia~~La~~Gv-~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~   99 (202)
T TIGR02356        22 SHVLIIGA-GGLGSPAALYLAGAGV-GTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER   99 (202)
T ss_pred             CCEEEECC-CHHHHHHHHHHHHcCC-CeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence            49999999 9999999999999986 4999999873     0              1  112233332222334333211


Q ss_pred             ---CchhhhhCCCcEEEEcC
Q 018618          101 ---PQLENALTGMDLVIIPA  117 (353)
Q Consensus       101 ---~d~~~al~~ADiVIi~a  117 (353)
                         .+.++.++++|+||.+.
T Consensus       100 i~~~~~~~~~~~~D~Vi~~~  119 (202)
T TIGR02356       100 VTAENLELLINNVDLVLDCT  119 (202)
T ss_pred             CCHHHHHHHHhCCCEEEECC
Confidence               23445689999998874

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.76  E-value=0.017  Score=52.75  Aligned_cols=153  Identities=12%  Similarity=0.066  Sum_probs=80.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE----eCCCchhhhhC-------C-
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENALT-------G-  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~-------~-  109 (353)
                      ++|.|+||+|.+|++++..|+..|.  ++++.+.+... ...++.+.. ...+..+    ....+++++++       . 
T Consensus         6 k~ilItGas~gIG~~la~~l~~~G~--~vv~~~~~~~~-~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   81 (253)
T PRK08642          6 QTVLVTGGSRGLGAAIARAFAREGA--RVVVNYHQSED-AAEALADEL-GDRAIALQADVTDREQVQAMFATATEHFGKP   81 (253)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCC--eEEEEcCCCHH-HHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4899999999999999999999887  88776654311 111111110 0112111    11112233332       2 


Q ss_pred             CcEEEEcCCCCC-------C--CCCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHH
Q 018618          110 MDLVIIPAGVPR-------K--PGMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       110 ADiVIi~ag~~~-------~--~g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                      .|++|..+|...       .  ...+.   .+.+..|+.....+.+.+..+   ...+.+++++......          
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~----------  151 (253)
T PRK08642         82 ITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQN----------  151 (253)
T ss_pred             CeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccC----------
Confidence            899999987521       1  11122   233556665555555554322   2235666666432211          


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcce
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP  212 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~  212 (353)
                        ..++.-.++.+......+-+.+|+.++  +..+++.
T Consensus       152 --~~~~~~~Y~~sK~a~~~l~~~la~~~~--~~~i~v~  185 (253)
T PRK08642        152 --PVVPYHDYTTAKAALLGLTRNLAAELG--PYGITVN  185 (253)
T ss_pred             --CCCCccchHHHHHHHHHHHHHHHHHhC--ccCeEEE
Confidence              122223566665556667777887765  3344433

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.74  E-value=0.013  Score=54.24  Aligned_cols=35  Identities=20%  Similarity=0.288  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|++.
T Consensus         5 ~k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~   39 (262)
T TIGR03325         5 GEVVLVTGGASGLGRAIVDRFVAEGA--RVAVLDKSA   39 (262)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            35899999999999999999999998  899999865

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.02  Score=54.79  Aligned_cols=169  Identities=15%  Similarity=0.035  Sum_probs=85.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCch---h-------hhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---E-------NALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~al~  108 (353)
                      +++.|+||+|.+|..++..|+..|.  +|++.+++..  .....++........+..+. .-.|+   +       +...
T Consensus        15 k~~lITGas~GIG~~~a~~La~~G~--~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         15 KRAVVTGASDGLGLGLARRLAAAGA--EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999987  8999998762  22233343211111222211 11222   1       1124


Q ss_pred             CCcEEEEcCCCCCCC--CC---CHHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          109 GMDLVIIPAGVPRKP--GM---TRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~--g~---~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      ..|++|..+|....+  ..   .....+..|...    .+.+.+.+++.  .+.|+++|.-......+-..-+.....++
T Consensus        93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~~~~~  170 (313)
T PRK05854         93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWERSYA  170 (313)
T ss_pred             CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccccccccCc
Confidence            589999999864221  11   122334555443    44555555432  34555554322111000000000001233


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +...++.+.+....+-..+++.+......|.+..+
T Consensus       171 ~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v  205 (313)
T PRK05854        171 GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLA  205 (313)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEE
Confidence            34456666655555667777665443444544444

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.72  E-value=0.056  Score=49.44  Aligned_cols=75  Identities=16%  Similarity=0.181  Sum_probs=47.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEE----eCCCchhhhhC-CCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGF----LGQPQLENALT-GMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~----~~t~d~~~al~-~ADiVI  114 (353)
                      ++|.|+||+|.+|+.++..|++.|.  ++++.+.+..  .....+.....  ..+...    ....++..++. +.|+||
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~id~vi   78 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGH--NVIAGVQIAPQVTALRAEAARRG--LALRVEKLDLTDAIDRAQAAEWDVDVLL   78 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcceEEEeeCCCHHHHHHHhcCCCCEEE
Confidence            3799999999999999999999887  8888887652  11111112111  112211    11123334444 899999


Q ss_pred             EcCCCC
Q 018618          115 IPAGVP  120 (353)
Q Consensus       115 i~ag~~  120 (353)
                      ..+|..
T Consensus        79 ~~ag~~   84 (257)
T PRK09291         79 NNAGIG   84 (257)
T ss_pred             ECCCcC
Confidence            998864

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=96.72  E-value=0.019  Score=54.93  Aligned_cols=115  Identities=16%  Similarity=0.133  Sum_probs=69.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC------CCC--eEEEEeCCCchhhhhCCCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD------TGA--VVRGFLGQPQLENALTGMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~------~~~--~v~~~~~t~d~~~al~~ADi  112 (353)
                      .|||+|+|+ |.||+.++..|...|.  +|.++++...  ....+....      ...  .+... . .+ .+.....|+
T Consensus         2 ~m~I~IiGa-GaiG~~~a~~L~~~G~--~V~lv~r~~~--~~~~i~~~~Gl~i~~~g~~~~~~~~-~-~~-~~~~~~~D~   73 (305)
T PRK05708          2 SMTWHILGA-GSLGSLWACRLARAGL--PVRLILRDRQ--RLAAYQQAGGLTLVEQGQASLYAIP-A-ET-ADAAEPIHR   73 (305)
T ss_pred             CceEEEECC-CHHHHHHHHHHHhCCC--CeEEEEechH--HHHHHhhcCCeEEeeCCcceeeccC-C-CC-cccccccCE
Confidence            479999999 9999999999998887  8999998531  111111110      011  11111 1 11 123468899


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          113 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       113 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      ||++....            .    ..+.++.+..+. +++.|+.+-|=++....+     .+.  ++.+++++-
T Consensus        74 viv~vK~~------------~----~~~al~~l~~~l~~~t~vv~lQNGv~~~e~l-----~~~--~~~~~v~~g  125 (305)
T PRK05708         74 LLLACKAY------------D----AEPAVASLAHRLAPGAELLLLQNGLGSQDAV-----AAR--VPHARCIFA  125 (305)
T ss_pred             EEEECCHH------------h----HHHHHHHHHhhCCCCCEEEEEeCCCCCHHHH-----HHh--CCCCcEEEE
Confidence            99985211            1    223444555443 788888888988766432     232  566777755

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=96.71  E-value=0.028  Score=59.73  Aligned_cols=149  Identities=17%  Similarity=0.180  Sum_probs=78.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCc---hhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d---~~~al~------  108 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++........+..+ ..-+|   .+++++      
T Consensus       414 gkvvLVTGasggIG~aiA~~La~~Ga--~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       414 RRVAFVTGGAGGIGRETARRLAAEGA--HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999987  999999876  22222333311100111111 11122   223333      


Q ss_pred             -CCcEEEEcCCCCCC-C--CCCHH---HHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 -GMDLVIIPAGVPRK-P--GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 -~ADiVIi~ag~~~~-~--g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                       +.|+||..+|.... +  ..+..   ..+..|+.    ..+...+.+++....+.++++|......            +
T Consensus       492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~------------~  559 (676)
T TIGR02632       492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVY------------A  559 (676)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcC------------C
Confidence             68999999986431 1  11221   22233433    3445556665544445555554321110            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhC
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      .+..-.++.+......+-+.+|..++
T Consensus       560 ~~~~~aY~aSKaA~~~l~r~lA~el~  585 (676)
T TIGR02632       560 GKNASAYSAAKAAEAHLARCLAAEGG  585 (676)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence            12222344444444556666777664

>PLN02256 arogenate dehydrogenase

Probab=96.71  E-value=0.014  Score=55.97  Aligned_cols=65  Identities=18%  Similarity=0.237  Sum_probs=45.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh-CCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-~~ADiVIi~a  117 (353)
                      +.+||+|||. |.+|..++..|...|.  +|+.+|.+.....+.++   .  .  ..+   ++.++.+ .++|+||++.
T Consensus        35 ~~~kI~IIG~-G~mG~slA~~L~~~G~--~V~~~d~~~~~~~a~~~---g--v--~~~---~~~~e~~~~~aDvVilav  100 (304)
T PLN02256         35 RKLKIGIVGF-GNFGQFLAKTFVKQGH--TVLATSRSDYSDIAAEL---G--V--SFF---RDPDDFCEEHPDVVLLCT  100 (304)
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECccHHHHHHHc---C--C--eee---CCHHHHhhCCCCEEEEec
Confidence            4579999998 9999999999988776  89999987522222211   1  1  111   3455555 4799999985

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.71  E-value=0.023  Score=52.34  Aligned_cols=154  Identities=16%  Similarity=0.149  Sum_probs=81.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      .++|.|+||+|.+|..++..|++.|.  .+++++.++ .......+....  ..+..+. .-+|   .++.++       
T Consensus        15 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         15 GKVAIVTGGNTGLGQGYAVALAKAGA--DIIITTHGTNWDETRRLIEKEG--RKVTFVQVDLTKPESAEKVVKEALEEFG   90 (258)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35899999999999999999999887  889998864 222222232211  1222211 1122   222233       


Q ss_pred             CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      ..|++|.++|.... +  ..+   ....+..|+.....+.+.+..+.   ..+.+++++......            +.+
T Consensus        91 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~  158 (258)
T PRK06935         91 KIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQ------------GGK  158 (258)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhcc------------CCC
Confidence            67999999886421 1  112   22345566655544444443321   235566665532211            111


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcce
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP  212 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~  212 (353)
                      ..-.++.+......+-+.+|+.++  +..|++.
T Consensus       159 ~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~  189 (258)
T PRK06935        159 FVPAYTASKHGVAGLTKAFANELA--AYNIQVN  189 (258)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhh--hhCeEEE
Confidence            112344443333456677777764  3445433

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=96.70  E-value=0.0042  Score=58.52  Aligned_cols=154  Identities=15%  Similarity=0.148  Sum_probs=83.5

Q ss_pred             EEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCCCCCC
Q 018618           45 AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGVPRK  122 (353)
Q Consensus        45 ~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag~~~~  122 (353)
                      .|+||+|++|++++..|...|.  +++++.... .   .|+.+            ..++++.++  ++|+||++|+....
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~--~v~~~~~~~-~---~Dl~~------------~~~l~~~~~~~~~d~Vih~A~~~~~   62 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGF--TNLVLRTHK-E---LDLTR------------QADVEAFFAKEKPTYVILAAAKVGG   62 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCC--cEEEeeccc-c---CCCCC------------HHHHHHHHhccCCCEEEEeeeeecc
Confidence            3899999999999999988876  545443221 0   12211            123344444  57999999875321


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc---hhHHHHHHHHHhCCCCC-CceEeechhhHHHHH
Q 018618          123 ---PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS---TVPIAAEVFKKAGTYDP-KKLLGVTMLDVVRAN  195 (353)
Q Consensus       123 ---~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~---~t~~~~~~~~~~~~~~~-~kviG~t~ld~~R~~  195 (353)
                         ......+++..|.....++++.+++....-+|...|--+..   -.++ .+-........| .-.+|.+.....++-
T Consensus        63 ~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~-~E~~~~~~~~~p~~~~Y~~sK~~~e~~~  141 (306)
T PLN02725         63 IHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPI-PETALLTGPPEPTNEWYAIAKIAGIKMC  141 (306)
T ss_pred             cchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCC-CHHHhccCCCCCCcchHHHHHHHHHHHH
Confidence               12234567789999999999999987643333332311100   0000 010000001112 123566544444444


Q ss_pred             HHHHHHhCCCCCCCc-ceEEeec
Q 018618          196 TFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       196 ~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ..+.+..+++...++ ..++|.+
T Consensus       142 ~~~~~~~~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        142 QAYRIQYGWDAISGMPTNLYGPH  164 (306)
T ss_pred             HHHHHHhCCCEEEEEecceeCCC
Confidence            455566676654443 4577764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.70  E-value=0.038  Score=49.94  Aligned_cols=115  Identities=21%  Similarity=0.300  Sum_probs=65.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------  106 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------  106 (353)
                      .++|.|+||+|.+|++++..|++.|.  ++++...+..   .....++....  ..+..+. .-.|   +.++       
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGA--NVVINYASSEAGAEALVAEIGALG--GKALAVQGDVSDAESVERAVDEAKAE   80 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999887  7767665542   22222232211  1222211 1112   1122       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618          107 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  159 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  159 (353)
                      +.+.|.||+++|.....   ..+.   ...+..|+.....+.+.+..+.   +...++++|.
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss  142 (248)
T PRK05557         81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISS  142 (248)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence            23689999998864321   1122   2335567777777777776543   2345555554

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=96.70  E-value=0.012  Score=53.06  Aligned_cols=113  Identities=17%  Similarity=0.293  Sum_probs=64.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~  108 (353)
                      ++|.|+||+|.+|..++..|++.|.  +|.++++++.  .....++....  ..+..+. .-.|   +.++       +.
T Consensus         6 ~~ilItGasg~iG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          6 KTALVTGASRGIGRAIALRLAADGA--KVVIYDSNEEAAEALAAELRAAG--GEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999988  7999998762  22222333211  1222211 1112   2222       23


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEec
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLIS  158 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~t  158 (353)
                      ..|.||..+|.....   ..+.   .+.+..|+.....+.+.+..+   .....++++|
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~s  140 (246)
T PRK05653         82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNIS  140 (246)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEC
Confidence            469999998753211   1122   234556776666666665432   2224555554

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.70  E-value=0.016  Score=52.31  Aligned_cols=102  Identities=18%  Similarity=0.279  Sum_probs=58.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLG-QPQ---LENAL------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al------  107 (353)
                      +++|.|+||+|.+|+.++..|.+.|+  +++++.....   .....++....  ..+..+.. -.|   +.+++      
T Consensus         6 ~~~vlItGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          6 GRVALVTGAARGLGRAIALRLARAGA--DVVVHYRSDEEAAEELVEAVEALG--RRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCcCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999988  6666555441   11222222211  22222211 112   22222      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHH
Q 018618          108 -TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIA  146 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~  146 (353)
                       .+.|+||+++|.....   ..+.   .+.+..|+.....+.+.+.
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  127 (249)
T PRK12825         82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVV  127 (249)
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence             4679999998853221   1222   3345667666666666653

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.045  Score=50.78  Aligned_cols=114  Identities=18%  Similarity=0.174  Sum_probs=63.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCch-------hhhhCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL-------ENALTGMD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~-------~~al~~AD  111 (353)
                      .++|.|+||+|.+|..++..|+..|.  .|++.++++  ......++..... ...+ .....++       .+.+.+.|
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~-~~~D-~~~~~~~~~~~~~~~~~~~~id   80 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA--RVAIGDLDEALAKETAAELGLVVG-GPLD-VTDPASFAAFLDAVEADLGPID   80 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhccceE-EEcc-CCCHHHHHHHHHHHHHHcCCCC
Confidence            35899999999999999999999887  889999865  2222222221100 0001 0001111       12235689


Q ss_pred             EEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHHhhCCCcEEEEecC
Q 018618          112 LVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       112 iVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN  159 (353)
                      ++|..+|.....   ..+   ....+..|+.....    +.+.+.+. ..+.|+++|.
T Consensus        81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS  137 (273)
T PRK07825         81 VLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPR-GRGHVVNVAS  137 (273)
T ss_pred             EEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEEEcC
Confidence            999998864321   112   22345566654444    44444433 3456666654

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.70  E-value=0.0028  Score=58.07  Aligned_cols=70  Identities=26%  Similarity=0.377  Sum_probs=46.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHH-HhcCCCCCeEEEEeCCCc---hhhh-hCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD-ISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~d-l~~~~~~~~v~~~~~t~d---~~~a-l~~ADiVIi~  116 (353)
                      |+++|+|+ |.+|+++|..|...|+  +++++|.++..  +.. +.+.....-+.+  ..+|   +++| +.++|++|.+
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~--~Vv~Id~d~~~--~~~~~~~~~~~~~v~g--d~t~~~~L~~agi~~aD~vva~   73 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGH--NVVLIDRDEER--VEEFLADELDTHVVIG--DATDEDVLEEAGIDDADAVVAA   73 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCC--ceEEEEcCHHH--HHHHhhhhcceEEEEe--cCCCHHHHHhcCCCcCCEEEEe
Confidence            68999999 9999999999999998  99999998721  111 121110111222  1123   2333 5888999997


Q ss_pred             CC
Q 018618          117 AG  118 (353)
Q Consensus       117 ag  118 (353)
                      .|
T Consensus        74 t~   75 (225)
T COG0569          74 TG   75 (225)
T ss_pred             eC
Confidence            54

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=96.70  E-value=0.0079  Score=57.41  Aligned_cols=64  Identities=16%  Similarity=0.232  Sum_probs=44.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC---CcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~---ADiVIi~a  117 (353)
                      |||+|||. |.+|+.++..|...|+  +|.++|+++..  +.++.+..    ...   ..++++..+.   +|+||++.
T Consensus         1 m~Ig~IGl-G~MG~~mA~~L~~~g~--~v~v~dr~~~~--~~~~~~~g----~~~---~~~~~e~~~~~~~~dvvi~~v   67 (301)
T PRK09599          1 MQLGMIGL-GRMGGNMARRLLRGGH--EVVGYDRNPEA--VEALAEEG----ATG---ADSLEELVAKLPAPRVVWLMV   67 (301)
T ss_pred             CEEEEEcc-cHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHCC----Cee---cCCHHHHHhhcCCCCEEEEEe
Confidence            58999999 9999999999999887  89999987622  22233221    111   1244455554   69988874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.69  E-value=0.019  Score=52.80  Aligned_cols=155  Identities=16%  Similarity=0.179  Sum_probs=83.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCC---chhhhh-------CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQP---QLENAL-------TGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~---d~~~al-------~~A  110 (353)
                      +++.|+||+|.+|..++..|+..|.  +|++++.+........+....  .++..+. .-+   +.++++       ...
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          9 KVAIITGCNTGLGQGMAIGLAKAGA--DIVGVGVAEAPETQAQVEALG--RKFHFITADLIQQKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999998  899998754322222232211  1222111 111   222222       357


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..+|.....   ..+   ....+..|+..    .+.+.+.+.+....+.+|+++......            +.+.
T Consensus        85 D~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~~  152 (251)
T PRK12481         85 DILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQ------------GGIR  152 (251)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcC------------CCCC
Confidence            9999999864321   112   22334556544    444444554433346676665432211            1122


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .-.++.+......+-+.+|..+.  +..|++..+
T Consensus       153 ~~~Y~asK~a~~~l~~~la~e~~--~~girvn~v  184 (251)
T PRK12481        153 VPSYTASKSAVMGLTRALATELS--QYNINVNAI  184 (251)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence            23455554444556667777653  344544444

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.69  E-value=0.026  Score=56.30  Aligned_cols=125  Identities=20%  Similarity=0.193  Sum_probs=69.7

Q ss_pred             hcCCCcccch----hhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCC
Q 018618           17 HLYPPNLQNS----CLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA   92 (353)
Q Consensus        17 ~~~~~~~~~~----~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~   92 (353)
                      |++|.+-.++    ++-+..-++- ..+.++|.|+||+|.+|.+++..|++.|.  +++++|.++.. ....+.......
T Consensus       151 ~~~~~~~~~~~~~~~~d~~~~ta~-sl~gK~VLITGASgGIG~aLA~~La~~G~--~Vi~l~r~~~~-l~~~~~~~~~~v  226 (406)
T PRK07424        151 HFDNQNAYYCGTFTLVDKLMGTAL-SLKGKTVAVTGASGTLGQALLKELHQQGA--KVVALTSNSDK-ITLEINGEDLPV  226 (406)
T ss_pred             EeccccceeeeeEEEeehhcCccc-CCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHHHhhcCCCe
Confidence            6667654432    3333322222 12346899999999999999999999887  88999986521 111122111111


Q ss_pred             e-EEE-EeCCCchhhhhCCCcEEEEcCCCCCCCCCCH---HHHHHHHHHHHHHHHHHH
Q 018618           93 V-VRG-FLGQPQLENALTGMDLVIIPAGVPRKPGMTR---DDLFNINAGIVRTLCEGI  145 (353)
Q Consensus        93 ~-v~~-~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r---~~~~~~N~~i~~~i~~~i  145 (353)
                      . +.. ....++..+.+.+.|++|+.+|.......+.   .+.+..|......+++.+
T Consensus       227 ~~v~~Dvsd~~~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~  284 (406)
T PRK07424        227 KTLHWQVGQEAALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELF  284 (406)
T ss_pred             EEEEeeCCCHHHHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            1 111 1111233455788999999988643323332   334566665554444443

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=96.69  E-value=0.029  Score=51.13  Aligned_cols=113  Identities=16%  Similarity=0.189  Sum_probs=64.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      ++|.|+||+|.+|+.++..|++.|.  +|++++++..  +....++....  ..+..+. .-.|.          .+.+.
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA--NVVVNDLGEAGAEAAAKVATDAG--GSVIYLVADVTKEDEIADMIAAAAAEFG   77 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3799999999999999999999888  8999998762  22222232211  1222211 11222          23356


Q ss_pred             CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  159 (353)
                      +.|+||..++.... +  ..+   .......|......+.+.+    ++.. ...++++|.
T Consensus        78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss  137 (255)
T TIGR01963        78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIAS  137 (255)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcc
Confidence            78999999875421 1  111   2233455666555555544    4333 234555543

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK09242 tropinone reductase; Provisional

Probab=96.69  E-value=0.072  Score=48.91  Aligned_cols=115  Identities=16%  Similarity=0.145  Sum_probs=65.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---h-------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---L-------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~-------~~al~  108 (353)
                      +++.|+||+|.+|..++..|++.|.  +|++++++.  ......++.......++..+.. -.+   .       .+.+.
T Consensus        10 k~~lItGa~~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242         10 QTALITGASKGIGLAIAREFLGLGA--DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999987  899999876  2333334433211122222111 111   1       12345


Q ss_pred             CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  159 (353)
                      ..|+||..+|.... +  ..+.   ...+..|+.....+.+.    +++. +.+.++++|.
T Consensus        88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS  147 (257)
T PRK09242         88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGS  147 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECc
Confidence            67999999886321 1  1122   23345566555445444    4333 3455665554

>PRK05650 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.021  Score=53.04  Aligned_cols=113  Identities=19%  Similarity=0.134  Sum_probs=63.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~  108 (353)
                      ++|.|+||+|.+|+.++..|+..|.  +|++.|++.  ......++....  ..+..+. .-+|.   ++.+       .
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~i~~~~~   76 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW--RLALADVNEEGGEETLKLLREAG--GDGFYQRCDVRDYSQLTALAQACEEKWG   76 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999987  899999865  222233343321  1221111 11222   2222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ..|++|..+|.....   ..+.   ...+..|+..    .+.+.+.+++.. .+.++++|.
T Consensus        77 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS  136 (270)
T PRK05650         77 GIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIAS  136 (270)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECC
Confidence            689999998864321   1222   2234566443    344444454443 345555554

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=96.68  E-value=0.039  Score=50.69  Aligned_cols=115  Identities=18%  Similarity=0.187  Sum_probs=66.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------h
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l  107 (353)
                      .++|.|+||+|.+|++++..|...|.  +++++|.+.  ......++.+..  ..+..+. .-+|.   +++       +
T Consensus        11 ~k~vlVtG~s~gIG~~la~~l~~~G~--~vv~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113         11 GKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999887  889999765  222233343321  1121111 11222   122       2


Q ss_pred             CCCcEEEEcCCCCCC--CCCCHHH---HHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRK--PGMTRDD---LFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~--~g~~r~~---~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ...|++|..+|....  ...+..+   .+..|+.....+.+.+..+   ...+.++++|.
T Consensus        87 ~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  146 (255)
T PRK06113         87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS  146 (255)
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEec
Confidence            457999999885321  1223232   3566776666666665432   22345555554

>PRK08251 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.079  Score=48.21  Aligned_cols=102  Identities=22%  Similarity=0.225  Sum_probs=59.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh----------hhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~----------~al~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.+++.  ......++........+..+. .-+|.+          +.+.
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGR--DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG   80 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999886  899999876  222233333221112222221 112221          2235


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGI  145 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i  145 (353)
                      ..|+||+.+|......   .+   -...+..|......+.+.+
T Consensus        81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  123 (248)
T PRK08251         81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAA  123 (248)
T ss_pred             CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            7899999998643221   11   1233456665554555444

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=96.67  E-value=0.0057  Score=51.38  Aligned_cols=75  Identities=20%  Similarity=0.312  Sum_probs=52.5

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .+..++.|+|| |.+|..++..|...|. .+|.+++++.  ++..+..+    ....+.... -+++.+.+.++|+||.+
T Consensus        10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~-~~i~i~nRt~~ra~~l~~~~----~~~~~~~~~-~~~~~~~~~~~DivI~a   82 (135)
T PF01488_consen   10 LKGKRVLVIGA-GGAARAVAAALAALGA-KEITIVNRTPERAEALAEEF----GGVNIEAIP-LEDLEEALQEADIVINA   82 (135)
T ss_dssp             GTTSEEEEESS-SHHHHHHHHHHHHTTS-SEEEEEESSHHHHHHHHHHH----TGCSEEEEE-GGGHCHHHHTESEEEE-
T ss_pred             cCCCEEEEECC-HHHHHHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHc----Cccccceee-HHHHHHHHhhCCeEEEe
Confidence            34569999999 9999999999999876 4799999875  23333333    112344332 24666788999999998


Q ss_pred             CCCC
Q 018618          117 AGVP  120 (353)
Q Consensus       117 ag~~  120 (353)
                      .+.+
T Consensus        83 T~~~   86 (135)
T PF01488_consen   83 TPSG   86 (135)
T ss_dssp             SSTT
T ss_pred             cCCC
Confidence            6544

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08589 short chain dehydrogenase; Validated

Probab=96.67  E-value=0.039  Score=51.44  Aligned_cols=154  Identities=14%  Similarity=0.156  Sum_probs=82.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~  108 (353)
                      .+++.|+||+|.+|..++..|+..|.  +|+++|+++ ......++.+..  ..+..+. .-+|   .+++       +.
T Consensus         6 ~k~vlItGas~gIG~aia~~l~~~G~--~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          6 NKVAVITGASTGIGQASAIALAQEGA--YVLAVDIAEAVSETVDKIKSNG--GKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHHHhcC--CeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            35899999999999999999999987  899999874 233333443321  1121110 1112   2222       23


Q ss_pred             CCcEEEEcCCCCCCCC----CCH---HHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRKPG----MTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g----~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..+|.....+    .+.   ...+..|+...    +.+.+.+.+.  .+.|++++......            +
T Consensus        82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~------------~  147 (272)
T PRK08589         82 RVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ--GGSIINTSSFSGQA------------A  147 (272)
T ss_pred             CcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEeCchhhcC------------C
Confidence            5799999998643211    122   22334455433    4444444433  36677766533211            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       148 ~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~v~~v  182 (272)
T PRK08589        148 DLYRSGYNAAKGAVINFTKSIAIEYG--RDGIRANAI  182 (272)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            12222234433333456677777763  344544433

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.037  Score=51.12  Aligned_cols=114  Identities=22%  Similarity=0.245  Sum_probs=66.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hh------hC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA------LT  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a------l~  108 (353)
                      .++|.|+||+|.+|..++..|+..|.  +|++++++.  ......++..   ...+..+. .-.|.+   +.      +.
T Consensus         5 ~~~vlItG~s~~iG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~~~~~~~   79 (263)
T PRK09072          5 DKRVLLTGASGGIGQALAEALAAAGA--RLLLVGRNAEKLEALAARLPY---PGRHRWVVADLTSEAGREAVLARAREMG   79 (263)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHhcC
Confidence            35899999999999999999999987  899999875  2222222311   11222211 112221   11      35


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ..|+||.++|.....   ..+   ..+.+..|+.....+.+.+..+   .+.+.+++++.
T Consensus        80 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS  139 (263)
T PRK09072         80 GINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGS  139 (263)
T ss_pred             CCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecC
Confidence            679999998864321   112   2234556766666666655443   22355665554

>KOG2305 consensus 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Probab=96.64  E-value=0.0046  Score=56.11  Aligned_cols=105  Identities=19%  Similarity=0.258  Sum_probs=69.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC------cHHH---HHHHhcCC-CCCe------EEEEeCCCchhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGV---TADISHMD-TGAV------VRGFLGQPQLEN  105 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~------~~~~---~~dl~~~~-~~~~------v~~~~~t~d~~~  105 (353)
                      -||+|+|. |.+|+..|..++..|+  +|.|||+.+      +...   ..+|+... ....      +..+++++++.+
T Consensus         4 ~ki~ivgS-gl~g~~WAmlFAs~Gy--qVqlYDI~e~Ql~~ALen~~Kel~~Lee~g~lrGnlsa~eqla~is~t~~l~E   80 (313)
T KOG2305|consen    4 GKIAIVGS-GLVGSSWAMLFASSGY--QVQLYDILEKQLQTALENVEKELRKLEEHGLLRGNLSADEQLALISGTTSLNE   80 (313)
T ss_pred             cceeEeec-ccccchHHHHHhccCc--eEEEeeccHHHHHHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhCCccHHH
Confidence            49999997 9999999999999999  999999977      1222   22333221 1111      222345788888


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchh
Q 018618          106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV  165 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t  165 (353)
                      ..++|=.|-.++              .+.+...+.+.+++++.. |..  |+.|..+..+.
T Consensus        81 ~vk~Ai~iQEcv--------------pE~L~lkk~ly~qlD~i~d~~t--IlaSSTSt~mp  125 (313)
T KOG2305|consen   81 LVKGAIHIQECV--------------PEDLNLKKQLYKQLDEIADPTT--ILASSTSTFMP  125 (313)
T ss_pred             HHhhhhhHHhhc--------------hHhhHHHHHHHHHHHHhcCCce--EEeccccccCh
Confidence            888884443332              445666788888888876 554  34555555553

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=96.62  E-value=0.04  Score=50.96  Aligned_cols=154  Identities=13%  Similarity=0.161  Sum_probs=82.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|+..|.  ++++.|.+.  ......++....  ..+..+. .-+|.   +++       +.
T Consensus        11 k~~lItGa~~~iG~~ia~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097         11 KIALITGASYGIGFAIAKAYAKAGA--TIVFNDINQELVDKGLAAYRELG--IEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999887  889998765  222333343221  1222211 11222   122       24


Q ss_pred             CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..+|.... +  ..+   ....+..|.....    .+.+.+.+ ...+.|++++......            +.
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~g~iv~isS~~~~~------------~~  153 (265)
T PRK07097         87 VIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIK-KGHGKIINICSMMSEL------------GR  153 (265)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh-cCCcEEEEEcCccccC------------CC
Confidence            57999999886321 1  112   2233445554433    34444433 2356677666543211            22


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +....++.+......+-+.+++.++  +..|++..+
T Consensus       154 ~~~~~Y~~sKaal~~l~~~la~e~~--~~gi~v~~v  187 (265)
T PRK07097        154 ETVSAYAAAKGGLKMLTKNIASEYG--EANIQCNGI  187 (265)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhh--hcCceEEEE
Confidence            2333455544333456677777663  344544333

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.62  E-value=0.024  Score=51.91  Aligned_cols=36  Identities=19%  Similarity=0.229  Sum_probs=31.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +.++|.|+||+|.+|++++..|+..|.  +|++++++.
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~--~Vi~~~r~~   43 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGA--KVVLASRRV   43 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            346899999999999999999998887  899999875

>PRK12742 oxidoreductase; Provisional

Probab=96.61  E-value=0.033  Score=50.29  Aligned_cols=156  Identities=17%  Similarity=0.200  Sum_probs=80.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCch---hhh---hCCCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---ENA---LTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~---~~a---l~~ADiVI  114 (353)
                      .++|.|+||+|.+|+.++..|++.|.  ++++.+.+... ...++.... ....... ..+|.   .+.   +...|++|
T Consensus         6 ~k~vlItGasggIG~~~a~~l~~~G~--~v~~~~~~~~~-~~~~l~~~~-~~~~~~~-D~~~~~~~~~~~~~~~~id~li   80 (237)
T PRK12742          6 GKKVLVLGGSRGIGAAIVRRFVTDGA--NVRFTYAGSKD-AAERLAQET-GATAVQT-DSADRDAVIDVVRKSGALDILV   80 (237)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCCHH-HHHHHHHHh-CCeEEec-CCCCHHHHHHHHHHhCCCcEEE
Confidence            35899999999999999999999887  78877654311 111121100 0111111 11222   122   34579999


Q ss_pred             EcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618          115 IPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       115 i~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      ..+|.....   ..+   ....+..|+.....++..+..+ .+.+.+++++.-....           ...+....++.+
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~~Y~~s  149 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDR-----------MPVAGMAAYAAS  149 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccccc-----------CCCCCCcchHHh
Confidence            998864321   112   2234555665554444333332 2345566555422111           012334456665


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ......+-+.+++.++  +..+++.++
T Consensus       150 Kaa~~~~~~~la~~~~--~~gi~v~~v  174 (237)
T PRK12742        150 KSALQGMARGLARDFG--PRGITINVV  174 (237)
T ss_pred             HHHHHHHHHHHHHHHh--hhCeEEEEE
Confidence            5444556677777764  334444333

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.035  Score=51.33  Aligned_cols=100  Identities=16%  Similarity=0.191  Sum_probs=59.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      +++.|+||+|.+|.+++..|+..|.  +++++|.+......... +.. ...+.. .....+.++.+...|++|+.+|..
T Consensus        15 k~~lITGas~gIG~ala~~l~~~G~--~Vi~~~r~~~~~~~~~~-~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         15 KRIGITGASGALGKALTKAFRAKGA--KVIGLTHSKINNSESND-ESP-NEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEECCchhhhhhhc-cCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            3899999999999999999999987  89999986521111111 111 111111 111123445677899999999864


Q ss_pred             CCCCCC---HHHHHHHHHHHHHHHHHHH
Q 018618          121 RKPGMT---RDDLFNINAGIVRTLCEGI  145 (353)
Q Consensus       121 ~~~g~~---r~~~~~~N~~i~~~i~~~i  145 (353)
                      .....+   ..+.+..|+.....+++.+
T Consensus        91 ~~~~~~~~~~~~~~~vN~~g~~~l~~~~  118 (245)
T PRK12367         91 PGGRQDPENINKALEINALSSWRLLELF  118 (245)
T ss_pred             CcCCCCHHHHHHHHHHHhHHHHHHHHHH
Confidence            322222   2344566765555555443

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=96.60  E-value=0.11  Score=48.27  Aligned_cols=74  Identities=22%  Similarity=0.211  Sum_probs=47.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|+..|.  +|+++|.+.  .+....++.+..  ..+..+. .-.|   ..++       +.
T Consensus        11 k~vlVtGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (278)
T PRK08277         11 KVAVITGGGGVLGGAMAKELARAGA--KVAILDRNQEKAEAVVAEIKAAG--GEALAVKADVLDKESLEQARQQILEDFG   86 (278)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999988  899999875  233333343211  1222211 1112   1122       24


Q ss_pred             CCcEEEEcCCC
Q 018618          109 GMDLVIIPAGV  119 (353)
Q Consensus       109 ~ADiVIi~ag~  119 (353)
                      ..|++|..+|.
T Consensus        87 ~id~li~~ag~   97 (278)
T PRK08277         87 PCDILINGAGG   97 (278)
T ss_pred             CCCEEEECCCC
Confidence            78999999884

>PRK08226 short chain dehydrogenase; Provisional

Probab=96.59  E-value=0.051  Score=50.01  Aligned_cols=115  Identities=22%  Similarity=0.286  Sum_probs=65.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~  108 (353)
                      .+++.|+||+|.+|+.++..|+..|.  +|++++.++ ......++...  ...+..+. .-++   .+++       +.
T Consensus         6 ~~~~lItG~s~giG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          6 GKTALITGALQGIGEGIARVFARHGA--NLILLDISPEIEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35899999999999999999999987  899999875 22222223221  11222211 1122   2222       23


Q ss_pred             CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  159 (353)
                      ..|+||..+|.... +  ..+   ....+..|+.....+.+.+..+.   ..+.++++|.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS  141 (263)
T PRK08226         82 RIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSS  141 (263)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECc
Confidence            56999999886321 1  111   23345667666665555544332   2345555543

>TIGR02415 23BDH acetoin reductases

Probab=96.58  E-value=0.074  Score=48.53  Aligned_cols=112  Identities=17%  Similarity=0.269  Sum_probs=63.9

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCch---hhh-------hCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL---ENA-------LTG  109 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~a-------l~~  109 (353)
                      ++.|+||+|.+|..++..|++.|.  +|++++.+.  ......++....  ..+..+.. -+|.   .++       +..
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~   77 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF--AVAVADLNEETAKETAKEINQAG--GKAVAYKLDVSDKDQVFSAIDQAAEKFGG   77 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999887  899999865  222233343221  22222211 1221   122       235


Q ss_pred             CcEEEEcCCCCCC-C--CCCHH---HHHHHHHHH----HHHHHHHHHhhCCCcEEEEec
Q 018618          110 MDLVIIPAGVPRK-P--GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       110 ADiVIi~ag~~~~-~--g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~t  158 (353)
                      .|+||..+|.... +  +.+..   ..+..|+..    ++.+.+.+++....+.++++|
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~s  136 (254)
T TIGR02415        78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAA  136 (254)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence            6999999886321 1  22332   234556543    344455555444445666554

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06197 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.038  Score=52.40  Aligned_cols=169  Identities=18%  Similarity=0.090  Sum_probs=86.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeC-CCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~-t~d~---~~a-------l~  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|++++++..  .....++........+..+.. -.|.   +++       +.
T Consensus        17 k~vlItGas~gIG~~~a~~l~~~G~--~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~   94 (306)
T PRK06197         17 RVAVVTGANTGLGYETAAALAAKGA--HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP   94 (306)
T ss_pred             CEEEEcCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence            5899999999999999999999987  8999998752  222223331111122222211 1222   121       23


Q ss_pred             CCcEEEEcCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCch-hHHHHHHHHHhCCCC
Q 018618          109 GMDLVIIPAGVPRKPG----MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNST-VPIAAEVFKKAGTYD  179 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g----~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~-t~~~~~~~~~~~~~~  179 (353)
                      ..|++|+.+|....+.    ......+..|...    .+.+.+.+++.. .+.|+++|...... ...-..-......++
T Consensus        95 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~  173 (306)
T PRK06197         95 RIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWERRYN  173 (306)
T ss_pred             CCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCcccCCC
Confidence            5899999998532111    1122334556555    566666665443 35666665422100 000000000000122


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +...+|.+.+....+-+.+++.+.  ...+++.++.
T Consensus       174 ~~~~Y~~SK~a~~~~~~~la~~l~--~~~i~v~~v~  207 (306)
T PRK06197        174 RVAAYGQSKLANLLFTYELQRRLA--AAGATTIAVA  207 (306)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhh--cCCCCeEEEE
Confidence            333455555555666777777764  3334444443

>PRK05993 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.017  Score=53.97  Aligned_cols=112  Identities=12%  Similarity=0.055  Sum_probs=63.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhh--------CCCcE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL--------TGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al--------~~ADi  112 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|++.+++....  .++..... ..+.. .....+.+.++        ...|+
T Consensus         5 k~vlItGasggiG~~la~~l~~~G~--~Vi~~~r~~~~~--~~l~~~~~-~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          5 RSILITGCSSGIGAYCARALQSDGW--RVFATCRKEEDV--AALEAEGL-EAFQLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHCCc-eEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            4799999999999999999999887  899999875211  12222111 11111 10011122222        24699


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          113 VIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +|..+|.....   ..+   ....+..|+..    .+.+.+.+++.. .+.|+++|.
T Consensus        80 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS  135 (277)
T PRK05993         80 LFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSS  135 (277)
T ss_pred             EEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECC
Confidence            99998764321   112   23345667655    556666666543 345565554

>PRK07985 oxidoreductase; Provisional

Probab=96.56  E-value=0.12  Score=48.84  Aligned_cols=156  Identities=16%  Similarity=0.119  Sum_probs=83.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEe-CCCchh----------h
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFL-GQPQLE----------N  105 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~-~t~d~~----------~  105 (353)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.+.+.    .+.....+....  ..+..+. .-+|.+          +
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G~--~Vi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREGA--DVAISYLPVEEEDAQDVKKIIEECG--RKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEecCCcchhhHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999987  888887643    111111122211  1222111 112211          2


Q ss_pred             hhCCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          106 ALTGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .+...|++|+.+|....  +  ..+.   ...+..|+.....+.+.+..+- ..+.||++|......            +
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~------------~  192 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQ------------P  192 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhcc------------C
Confidence            23467999999885321  1  2222   3345677766666666655432 346677666432111            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+|+.++  +..|++.++
T Consensus       193 ~~~~~~Y~asKaal~~l~~~la~el~--~~gIrvn~i  227 (294)
T PRK07985        193 SPHLLDYAATKAAILNYSRGLAKQVA--EKGIRVNIV  227 (294)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHh--HhCcEEEEE
Confidence            22223345444333445566666653  334444433

>PRK06523 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.0064  Score=55.99  Aligned_cols=35  Identities=14%  Similarity=0.126  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .++|.|+||+|.+|+.++..|++.|.  +|+++++++
T Consensus         9 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~r~~   43 (260)
T PRK06523          9 GKRALVTGGTKGIGAATVARLLEAGA--RVVTTARSR   43 (260)
T ss_pred             CCEEEEECCCCchhHHHHHHHHHCCC--EEEEEeCCh
Confidence            35899999999999999999999887  899999865

>PRK06398 aldose dehydrogenase; Validated

Probab=96.56  E-value=0.037  Score=51.12  Aligned_cols=150  Identities=13%  Similarity=0.130  Sum_probs=80.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhh-------hCCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA-------LTGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~a-------l~~ADiVI  114 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++..........+    ++.   ...+.+++       +...|++|
T Consensus         7 k~vlItGas~gIG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~----D~~---~~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          7 KVAIVTGGSQGIGKAVVNRLKEEGS--NVINFDIKEPSYNDVDYFKV----DVS---NKEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCCccccCceEEEEc----cCC---CHHHHHHHHHHHHHHcCCCCEEE
Confidence            5899999999999999999999987  89999986521100000000    000   01122222       34689999


Q ss_pred             EcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          115 IPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       115 i~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      ..+|.... +  ..+   ....+..|+.....+.+.+..+   ...+.|+++|.-...            ...+..-.++
T Consensus        78 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~Y~  145 (258)
T PRK06398         78 NNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSF------------AVTRNAAAYV  145 (258)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhc------------cCCCCCchhh
Confidence            99886421 1  112   2234566665544444443322   234566666542111            1223334455


Q ss_pred             echhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          186 VTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       186 ~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .+......+-+.+|..++  +. |++..+.
T Consensus       146 ~sKaal~~~~~~la~e~~--~~-i~vn~i~  172 (258)
T PRK06398        146 TSKHAVLGLTRSIAVDYA--PT-IRCVAVC  172 (258)
T ss_pred             hhHHHHHHHHHHHHHHhC--CC-CEEEEEe
Confidence            554444456677777764  22 5544443

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.092  Score=48.17  Aligned_cols=113  Identities=13%  Similarity=0.112  Sum_probs=64.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~  109 (353)
                      .++.|+||+|.+|..++..|++.|.  ++++++.++. .....++....  ..+..+. .-++   ++.++       ..
T Consensus         8 ~~ilItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          8 KVVIVTGGASGIGAAISLRLAEEGA--IPVIFGRSAPDDEFAEELRALQ--PRAEFVQVDLTDDAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC--cEEEEcCChhhHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4899999999999999999999987  7888887662 22233333221  1222211 1122   22333       25


Q ss_pred             CcEEEEcCCCCCCCC-----CCHHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEec
Q 018618          110 MDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCC--PNATVNLIS  158 (353)
Q Consensus       110 ADiVIi~ag~~~~~g-----~~r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~t  158 (353)
                      .|+||..+|......     ++..+.+..|+.....+.+.+..+-  ..+.+++++
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~s  139 (258)
T PRK08628         84 IDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNIS  139 (258)
T ss_pred             CCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEEC
Confidence            799999998542221     1123345667665555555544322  234454444

>PRK08264 short chain dehydrogenase; Validated

Probab=96.55  E-value=0.034  Score=50.37  Aligned_cols=142  Identities=11%  Similarity=0.053  Sum_probs=77.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE----eCCCchhhhh---CCCcEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF----LGQPQLENAL---TGMDLV  113 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~----~~t~d~~~al---~~ADiV  113 (353)
                      .++|.|+||+|.+|+.++..|++.|. .+|++++++..+...   .    ...+..+    ....++++.+   ...|+|
T Consensus         6 ~~~vlItGgsg~iG~~la~~l~~~G~-~~V~~~~r~~~~~~~---~----~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   77 (238)
T PRK08264          6 GKVVLVTGANRGIGRAFVEQLLARGA-AKVYAAARDPESVTD---L----GPRVVPLQLDVTDPASVAAAAEAASDVTIL   77 (238)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCc-ccEEEEecChhhhhh---c----CCceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence            34899999999999999999998875 368889876521111   1    1111111    1112223333   357999


Q ss_pred             EEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          114 IIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       114 Ii~ag~~~~~----g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      |..+|.....    ..+.   .+.+..|......+.+.+...   ...+.++++|......            +.+....
T Consensus        78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~------------~~~~~~~  145 (238)
T PRK08264         78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWV------------NFPNLGT  145 (238)
T ss_pred             EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcc------------CCCCchH
Confidence            9999863211    1122   234456666666666654432   2345566665533211            2333334


Q ss_pred             EeechhhHHHHHHHHHHHh
Q 018618          184 LGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l  202 (353)
                      +|.+......+-..+++.+
T Consensus       146 y~~sK~a~~~~~~~l~~~~  164 (238)
T PRK08264        146 YSASKAAAWSLTQALRAEL  164 (238)
T ss_pred             hHHHHHHHHHHHHHHHHHh
Confidence            5555444444555666665

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.14  Score=46.89  Aligned_cols=156  Identities=19%  Similarity=0.161  Sum_probs=82.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---h-------hh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NA  106 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~a  106 (353)
                      .+++.|+||+|.+|.+++..|+..|.  +|++.+.+.   ......++....  .....+. .-++.   +       +.
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSNG--GSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcCCCHHHHHHHHHHHHhcC--CceEEEecccCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999997  788875433   222333343211  1111100 00111   1       11


Q ss_pred             ------hCCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHH
Q 018618          107 ------LTGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFK  173 (353)
Q Consensus       107 ------l~~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~  173 (353)
                            ....|++|..+|.... +  ..+   ....+..|+.....+.+.+...- ..+.||++|.-....         
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------  150 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI---------  150 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccccc---------
Confidence                  1268999999986321 1  112   23345567655555555444332 346666666433211         


Q ss_pred             HhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          174 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       174 ~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                         +.+..-.++.+......+-+.+|..++  +..|++..+
T Consensus       151 ---~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~girvn~v  186 (252)
T PRK12747        151 ---SLPDFIAYSMTKGAINTMTFTLAKQLG--ARGITVNAI  186 (252)
T ss_pred             ---CCCCchhHHHHHHHHHHHHHHHHHHHh--HcCCEEEEE
Confidence               122223355554445566677777764  334443333

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.23  Score=46.10  Aligned_cols=115  Identities=13%  Similarity=0.126  Sum_probs=66.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe----CCCchhhhh------CC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLENAL------TG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al------~~  109 (353)
                      +.+.|+||+|.+|..++..|++.|.  +|+++|++.  +.....++.... ...+..+.    ...+.++.+      ..
T Consensus         9 k~~lItGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~   85 (263)
T PRK08339          9 KLAFTTASSKGIGFGVARVLARAGA--DVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELKNIGE   85 (263)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence            3688999999999999999999997  899999875  233333343211 11222211    111222222      35


Q ss_pred             CcEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          110 MDLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      .|++|..+|.+...   ..+.   ...+..|    ....+.+.+.+++.. .+.||++|..
T Consensus        86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~  145 (263)
T PRK08339         86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSV  145 (263)
T ss_pred             CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCc
Confidence            79999998864321   1222   2234445    345666666665443 4566666543

>PRK07023 short chain dehydrogenase; Provisional

Probab=96.53  E-value=0.0093  Score=54.37  Aligned_cols=35  Identities=14%  Similarity=0.191  Sum_probs=31.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +|+|.|+||+|.+|..++..|++.|.  ++++++.+.
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~--~v~~~~r~~   35 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGI--AVLGVARSR   35 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCC--EEEEEecCc
Confidence            46899999999999999999998887  899999865

>PRK09186 flagellin modification protein A; Provisional

Probab=96.53  E-value=0.034  Score=50.89  Aligned_cols=35  Identities=26%  Similarity=0.275  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .++|.|+||+|.+|.+++..|+..|.  +|++.+++.
T Consensus         4 ~k~vlItGas~giG~~~a~~l~~~g~--~v~~~~r~~   38 (256)
T PRK09186          4 GKTILITGAGGLIGSALVKAILEAGG--IVIAADIDK   38 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCh
Confidence            45899999999999999999999987  899998765

>PRK12744 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.11  Score=47.64  Aligned_cols=155  Identities=15%  Similarity=0.148  Sum_probs=82.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC------cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-----
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-----  106 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~------~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-----  106 (353)
                      +++.|+||+|.+|.+++..|+..|.  ++++++.+.      ......++....  ..+..+. .-+|   .+++     
T Consensus         9 k~vlItGa~~gIG~~~a~~l~~~G~--~vv~i~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   84 (257)
T PRK12744          9 KVVLIAGGAKNLGGLIARDLAAQGA--KAVAIHYNSAASKADAEETVAAVKAAG--AKAVAFQADLTTAAAVEKLFDDAK   84 (257)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC--cEEEEecCCccchHHHHHHHHHHHHhC--CcEEEEecCcCCHHHHHHHHHHHH
Confidence            4899999999999999999998887  766665432      112222232211  1222211 1122   2222     


Q ss_pred             --hCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhHHHHHHHHHhC
Q 018618          107 --LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       107 --l~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~~~~~~~~~~~  176 (353)
                        +...|++|+.+|.....   ..+   ....+..|+.....+++.+...- +.+.++++ +......            
T Consensus        85 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~------------  152 (257)
T PRK12744         85 AAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAF------------  152 (257)
T ss_pred             HhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhccc------------
Confidence              23679999999864211   122   22345567666555555554332 33444433 3322111            


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                       .|..-.++.+......+-+.+++.++  +..|++..+.
T Consensus       153 -~~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~  188 (257)
T PRK12744        153 -TPFYSAYAGSKAPVEHFTRAASKEFG--ARGISVTAVG  188 (257)
T ss_pred             -CCCcccchhhHHHHHHHHHHHHHHhC--cCceEEEEEe
Confidence             12223466665555677788888875  3445444443

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=96.52  E-value=0.073  Score=48.92  Aligned_cols=155  Identities=13%  Similarity=0.168  Sum_probs=82.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~A  110 (353)
                      +.+.|+|++|.+|.+++..|++.|.  +|+++|.........++....  ..+..+. .-+|   .++.+       ...
T Consensus        11 k~~lItG~~~gIG~a~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993         11 KVAVVTGCDTGLGQGMALGLAEAGC--DIVGINIVEPTETIEQVTALG--RRFLSLTADLRKIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEecCcchHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999987  888888765322223333211  1222211 1122   22222       368


Q ss_pred             cEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..+|.... +  ..+   ....+..|+.....+.+.    +.+..+.+.++++|.-....            +.+.
T Consensus        87 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~  154 (253)
T PRK08993         87 DILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQ------------GGIR  154 (253)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhcc------------CCCC
Confidence            999999986421 1  112   334456666554444444    43333456676665422111            1112


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .-.++.+......+-+.+|+.+.  +..|++..+
T Consensus       155 ~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v  186 (253)
T PRK08993        155 VPSYTASKSGVMGVTRLMANEWA--KHNINVNAI  186 (253)
T ss_pred             CcchHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence            22345544333345566666653  344544433

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=96.52  E-value=0.2  Score=46.13  Aligned_cols=157  Identities=15%  Similarity=0.137  Sum_probs=82.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEE-eCCCchh---hh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGF-LGQPQLE---NA-------  106 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~-~~t~d~~---~a-------  106 (353)
                      .+++.|+||+|.+|..++..|+..|.  .+++.+.+.   ......++....  ..+..+ ..-+|.+   +.       
T Consensus         7 ~k~~lItGa~~gIG~~ia~~l~~~G~--~vvi~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          7 GKVVVITGGSTGLGRAMAVRFGKEKA--KVVINYRSDEEEANDVAEEIKKAG--GEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999987  777776644   222233343221  122211 1112221   11       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          107 LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~---g~~r~---~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      +...|++|..+|.....   ..+..   ..+..|+..    .+.+.+.+.+....+.++++|.-...            .
T Consensus        83 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~------------~  150 (261)
T PRK08936         83 FGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQ------------I  150 (261)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccc------------C
Confidence            23579999998864221   11222   234566443    34455555555545666666542111            1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ..|..-.++.+......+-..+++.+.  +..|++.++.
T Consensus       151 ~~~~~~~Y~~sKaa~~~~~~~la~e~~--~~gi~v~~v~  187 (261)
T PRK08936        151 PWPLFVHYAASKGGVKLMTETLAMEYA--PKGIRVNNIG  187 (261)
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHh--hcCeEEEEEE
Confidence            233333455543333345566666653  3455554443

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.52  E-value=0.083  Score=48.38  Aligned_cols=155  Identities=15%  Similarity=0.162  Sum_probs=84.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|..++..|++.|.  +|++.+.++  ......++.+..  ..+..+. .-+|   .++++       .
T Consensus         7 k~~lItGas~giG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          7 KVAIITGASSGIGRAAAKLFAREGA--KVVVGARRQAELDQLVAEIRAEG--GEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4899999999999999999999988  899999876  233333444321  1222211 1112   12222       3


Q ss_pred             CCcEEEEcCCCCC--CC--CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPR--KP--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~--~~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..+|...  .+  ..+   ....+..|+.    ..+.+.+.+.+. ..+.+++++......           .+
T Consensus        83 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~~~-----------~~  150 (254)
T PRK07478         83 GLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVGHT-----------AG  150 (254)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHhhc-----------cC
Confidence            6799999988632  12  122   2334566664    444445555443 334555555422110           12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-..+++.++  +..|++..+
T Consensus       151 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  185 (254)
T PRK07478        151 FPGMAAYAASKAGLIGLTQVLAAEYG--AQGIRVNAL  185 (254)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHh--hcCEEEEEE
Confidence            33333455554444556677777764  344544433

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.50  E-value=0.025  Score=54.18  Aligned_cols=114  Identities=13%  Similarity=0.035  Sum_probs=64.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .++|.|+||+|.+|.+++..|+..|.  +|++++++.  ......++...  ...+..+. .-+|   .++++       
T Consensus         6 ~k~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          6 KGTVIITGASSGVGLYAAKALAKRGW--HVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCEEEEEcCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            34799999999999999999999886  899999865  22223333221  11222211 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCC----CCCCH---HHHHHHHHHHHHHH----HHHHHhhCC-CcEEEEec
Q 018618          108 TGMDLVIIPAGVPRK----PGMTR---DDLFNINAGIVRTL----CEGIAKCCP-NATVNLIS  158 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~----~g~~r---~~~~~~N~~i~~~i----~~~i~~~~p-~a~viv~t  158 (353)
                      ...|++|..||....    ...+.   ...+..|......+    .+.+++... .+.|+++|
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vs  144 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILG  144 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEc
Confidence            248999999985321    12222   23456666544444    444444332 24555554

>PRK12743 oxidoreductase; Provisional

Probab=96.50  E-value=0.17  Score=46.51  Aligned_cols=114  Identities=14%  Similarity=0.158  Sum_probs=64.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------h
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l  107 (353)
                      .+|.|+||+|.+|.+++..|++.|.  +|++++...   ......++....  ..+..+. .-+|.   +++       +
T Consensus         3 k~vlItGas~giG~~~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          3 QVAIVTASDSGIGKACALLLAQQGF--DIGITWHSDEEGAKETAEEVRSHG--VRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3799999999999999999999987  888876543   222223333221  1222211 11222   122       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh----CCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tN  159 (353)
                      ...|++|+.+|.....   ..+   ....+..|+.....+.+.+..+    ...+.++++|.
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS  140 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITS  140 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEee
Confidence            3579999998864321   112   2334556666555555544332    23456666665

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.50  E-value=0.013  Score=56.88  Aligned_cols=97  Identities=21%  Similarity=0.284  Sum_probs=62.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|||. |.+|+.+|..|..-|.  +|..+|+......  +... .    .. .   .++++.+++||+|++.....
T Consensus       150 gktvgIiG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~--~~~~-~----~~-~---~~l~ell~~aDiV~l~lP~t  215 (333)
T PRK13243        150 GKTIGIIGF-GRIGQAVARRAKGFGM--RILYYSRTRKPEA--EKEL-G----AE-Y---RPLEELLRESDFVSLHVPLT  215 (333)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCChhh--HHHc-C----CE-e---cCHHHHHhhCCEEEEeCCCC
Confidence            469999999 9999999999987787  8999998652211  1111 1    11 1   25678899999999985211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                                 ..+-.++..  +.+....|++++|+++  ..+|.-
T Consensus       216 -----------~~T~~~i~~--~~~~~mk~ga~lIN~aRg~~vd~~  248 (333)
T PRK13243        216 -----------KETYHMINE--ERLKLMKPTAILVNTARGKVVDTK  248 (333)
T ss_pred             -----------hHHhhccCH--HHHhcCCCCeEEEECcCchhcCHH
Confidence                       111111211  2333345789999986  556544

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.014  Score=52.97  Aligned_cols=34  Identities=15%  Similarity=0.220  Sum_probs=31.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+.|+||+|.+|+.++..|.+.|.  +|+++|++.
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~--~v~~~~r~~   34 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGH--KVTLVGARR   34 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            5899999999999999999999887  899999865

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.49  E-value=0.023  Score=54.61  Aligned_cols=100  Identities=18%  Similarity=0.242  Sum_probs=64.5

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .+.++|+|+|+ |.+|..++..|...+. .+|.++|++..  ...+..+.     ..+..   .+++++++.++|+||.+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~-~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVi~a  245 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGV-AEITIANRTYERAEELAKELG-----GNAVP---LDELLELLNEADVVISA  245 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCC-CEEEEEeCCHHHHHHHHHHcC-----CeEEe---HHHHHHHHhcCCEEEEC
Confidence            35679999999 9999999988887553 48999998752  22222221     12211   13567888999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHH-Hhh-CCCcEEEEecCCCCch
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGI-AKC-CPNATVNLISNPVNST  164 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i-~~~-~p~a~viv~tNPv~~~  164 (353)
                      .+.+..                .++.+.+ ... .+..+++-+++|-|+-
T Consensus       246 t~~~~~----------------~~~~~~~~~~~~~~~~~viDlavPrdi~  279 (311)
T cd05213         246 TGAPHY----------------AKIVERAMKKRSGKPRLIVDLAVPRDIE  279 (311)
T ss_pred             CCCCch----------------HHHHHHHHhhCCCCCeEEEEeCCCCCCc
Confidence            765521                1211221 111 2456788899998865

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK07035 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.039  Score=50.43  Aligned_cols=114  Identities=11%  Similarity=0.092  Sum_probs=64.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      ++|.|+||+|.+|.+++..|...|.  .|+++|.+.  ......++.+..  .....+. .-+|.   +++       +.
T Consensus         9 k~vlItGas~gIG~~l~~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          9 KIALVTGASRGIGEAIAKLLAQQGA--HVIVSSRKLDGCQAVADAIVAAG--GKAEALACHIGEMEQIDALFAHIRERHG   84 (252)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999887  899999875  233333443321  1111110 11121   222       23


Q ss_pred             CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~--~~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ..|++|..+|...  .+  ..+.   ...+..|+.....+.+.+.++   ...+.+++++.
T Consensus        85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS  145 (252)
T PRK07035         85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVAS  145 (252)
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECc
Confidence            5799999887421  11  2222   234556665555555444333   22355666554

>PRK07074 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.035  Score=50.90  Aligned_cols=143  Identities=18%  Similarity=0.144  Sum_probs=75.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCch---hhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---ENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~---~~al~-------  108 (353)
                      .++.|+||+|.+|..++..|++.|.  +|+++|.+.  ......++..    ..+..+ ..-.|.   ..++.       
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~--~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGD--RVLALDIDAAALAAFADALGD----ARFVPVACDLTDAASLAAALANAAAERG   76 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3799999999999999999998887  899999865  2222223321    112111 011222   22332       


Q ss_pred             CCcEEEEcCCCCCCCC---CCHH---HHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MTRD---DLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~r~---~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      +.|+||..+|......   .+..   ..+..|......+.+.+...   ...+.+++++......          ..+. 
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----------~~~~-  145 (257)
T PRK07074         77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA----------ALGH-  145 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC----------CCCC-
Confidence            5799999987532211   1222   22345655555555555322   2334555555421100          0111 


Q ss_pred             CCceEeechhhHHHHHHHHHHHhC
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                        -.++.+.....++-..+++.++
T Consensus       146 --~~y~~sK~a~~~~~~~~a~~~~  167 (257)
T PRK07074        146 --PAYSAAKAGLIHYTKLLAVEYG  167 (257)
T ss_pred             --cccHHHHHHHHHHHHHHHHHHh
Confidence              1344444444556667777664

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.057  Score=50.21  Aligned_cols=113  Identities=19%  Similarity=0.137  Sum_probs=61.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~ADiV  113 (353)
                      +++.|+||+|.+|..++..|+..|.  +|++++++....  .++..... ..+.. .....+.+++       +.+.|+|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~--~~~~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   76 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY--EVWATARKAEDV--EALAAAGF-TAVQLDVNDGAALARLAEELEAEHGGLDVL   76 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCCC-eEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4799999999999999999998887  899999865211  12222111 11111 1111122222       2468999


Q ss_pred             EEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618          114 IIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  159 (353)
Q Consensus       114 Ii~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  159 (353)
                      |..+|.... +  ..+.   ...+..|+.....+.+.+..+.  ..+.+++++.
T Consensus        77 i~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS  130 (274)
T PRK05693         77 INNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGS  130 (274)
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECC
Confidence            999985421 1  1122   2334556555444444443221  1345666554

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=96.46  E-value=0.014  Score=55.03  Aligned_cols=148  Identities=23%  Similarity=0.264  Sum_probs=89.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag~  119 (353)
                      |||.|+|++|++|+.+...|. .+.  +++-.|..+     +|+.+..            ...+.++  .-|+||.+|.+
T Consensus         1 M~iLi~G~~GqLG~~L~~~l~-~~~--~v~a~~~~~-----~Ditd~~------------~v~~~i~~~~PDvVIn~AAy   60 (281)
T COG1091           1 MKILITGANGQLGTELRRALP-GEF--EVIATDRAE-----LDITDPD------------AVLEVIRETRPDVVINAAAY   60 (281)
T ss_pred             CcEEEEcCCChHHHHHHHHhC-CCc--eEEeccCcc-----ccccChH------------HHHHHHHhhCCCEEEECccc
Confidence            679999999999999998887 444  777777654     3443322            1233343  56999999886


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCC--Cch-hHHHHHHHHHhCCCCCCceEeechhhHHH
Q 018618          120 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV--NST-VPIAAEVFKKAGTYDPKKLLGVTMLDVVR  193 (353)
Q Consensus       120 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv--~~~-t~~~~~~~~~~~~~~~~kviG~t~ld~~R  193 (353)
                      ..-.  ..++..-+..|......+++..+++  ++++|-+| .-|  ..- .+     ++..---.|..++|-+.+....
T Consensus        61 t~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--ga~lVhiSTDyVFDG~~~~~-----Y~E~D~~~P~nvYG~sKl~GE~  133 (281)
T COG1091          61 TAVDKAESEPELAFAVNATGAENLARAAAEV--GARLVHISTDYVFDGEKGGP-----YKETDTPNPLNVYGRSKLAGEE  133 (281)
T ss_pred             cccccccCCHHHHHHhHHHHHHHHHHHHHHh--CCeEEEeecceEecCCCCCC-----CCCCCCCCChhhhhHHHHHHHH
Confidence            5422  2345666789999999999999987  44555443 333  100 00     0010012345677776554332


Q ss_pred             HHHHHHHHhCCCCCCC--cceEEeecCCCcc
Q 018618          194 ANTFVAEVLGLDPRDV--DVPVVGGHAGVTI  222 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v--~~~viG~hg~~~~  222 (353)
                      +    .+..+ +-.-|  ..|++|++|. +.
T Consensus       134 ~----v~~~~-~~~~I~Rtswv~g~~g~-nF  158 (281)
T COG1091         134 A----VRAAG-PRHLILRTSWVYGEYGN-NF  158 (281)
T ss_pred             H----HHHhC-CCEEEEEeeeeecCCCC-CH
Confidence            2    22222 22222  5889999886 44

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.46  E-value=0.017  Score=53.81  Aligned_cols=68  Identities=18%  Similarity=0.228  Sum_probs=45.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||+ |.+|+.++..|...++ ...+.++|.+...  +..+....  ......   ++..+++++||+||++.
T Consensus         1 m~IgiIG~-G~mG~aia~~L~~~g~~~~~i~v~~r~~~~--~~~l~~~~--~~~~~~---~~~~~~~~~aDvVilav   69 (258)
T PRK06476          1 MKIGFIGT-GAITEAMVTGLLTSPADVSEIIVSPRNAQI--AARLAERF--PKVRIA---KDNQAVVDRSDVVFLAV   69 (258)
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCChheEEEECCCHHH--HHHHHHHc--CCceEe---CCHHHHHHhCCEEEEEe
Confidence            58999998 9999999999988775 3456778875422  22222211  112221   35567789999999985

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=96.45  E-value=0.023  Score=55.00  Aligned_cols=66  Identities=18%  Similarity=0.141  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +.+||+|||. |.+|.+++..|...|+  +++..+.+....... .....    +..    .+..+++++||+|+++.
T Consensus        16 ~gktIgIIG~-GsmG~AlA~~L~~sG~--~Vvv~~r~~~~s~~~-A~~~G----~~~----~s~~eaa~~ADVVvLaV   81 (330)
T PRK05479         16 KGKKVAIIGY-GSQGHAHALNLRDSGV--DVVVGLREGSKSWKK-AEADG----FEV----LTVAEAAKWADVIMILL   81 (330)
T ss_pred             CCCEEEEEee-HHHHHHHHHHHHHCCC--EEEEEECCchhhHHH-HHHCC----Cee----CCHHHHHhcCCEEEEcC
Confidence            3469999999 9999999999999888  888877654211111 11111    111    25678899999999984

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.45  E-value=0.029  Score=53.99  Aligned_cols=91  Identities=20%  Similarity=0.244  Sum_probs=60.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|+|. |.+|+.+|..|..-|.  +|..+|......        .   .+..+....++++.+++||+|+++....
T Consensus       136 g~tvgIvG~-G~IG~~vA~~l~afG~--~V~~~~~~~~~~--------~---~~~~~~~~~~l~e~l~~aDvvv~~lPlt  201 (312)
T PRK15469        136 DFTIGILGA-GVLGSKVAQSLQTWGF--PLRCWSRSRKSW--------P---GVQSFAGREELSAFLSQTRVLINLLPNT  201 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCCCCC--------C---CceeecccccHHHHHhcCCEEEECCCCC
Confidence            469999999 9999999999997787  999999754110        0   0011111246789999999999984211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                                 ..+..++.  .+.+.+..|++++|+++
T Consensus       202 -----------~~T~~li~--~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        202 -----------PETVGIIN--QQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             -----------HHHHHHhH--HHHHhcCCCCcEEEECC
Confidence                       22222332  23444455889999987

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.45  E-value=0.011  Score=52.68  Aligned_cols=76  Identities=20%  Similarity=0.236  Sum_probs=49.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE--eCCCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--LGQPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~--~~t~d~~~al~~ADiVIi  115 (353)
                      +.+++.|+||+|.+|..++..|...+.  ++.+++++.  +.....++.+.. ...+...  ....++.++++++|+||.
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~--~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~diVi~  103 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA--RVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIKGADVVFA  103 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHhcCCEEEE
Confidence            346999999889999999999988775  899999865  222223333211 1222221  111234578899999888


Q ss_pred             cCC
Q 018618          116 PAG  118 (353)
Q Consensus       116 ~ag  118 (353)
                      +..
T Consensus       104 at~  106 (194)
T cd01078         104 AGA  106 (194)
T ss_pred             CCC
Confidence            754

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.44  E-value=0.1  Score=47.45  Aligned_cols=114  Identities=14%  Similarity=0.177  Sum_probs=62.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      +++.|+||+|.+|..++..|++.|.  ++++. +.+.  ......++....  ..+..+. .-+|   .+.++       
T Consensus         5 ~~vlItGa~g~iG~~~a~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          5 KVALVTGSSRGIGKAIALRLAEEGY--DIAVNYARSRKAAEETAEEIEALG--RKALAVKANVGDVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999887  76664 4443  222223333221  2222211 1112   22223       


Q ss_pred             CCCcEEEEcCCCCC-CC--CCCHH---HHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPR-KP--GMTRD---DLFNINAGIVRTLCEGIAKCC---PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~-~~--g~~r~---~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  159 (353)
                      ...|+||..+|... .+  ..+..   ..+..|......+++.+..+.   +.+.++++|.
T Consensus        81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS  141 (250)
T PRK08063         81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSS  141 (250)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence            35899999987532 11  11222   234566655555555555432   3346666654

>PRK06196 oxidoreductase; Provisional

Probab=96.44  E-value=0.04  Score=52.58  Aligned_cols=113  Identities=17%  Similarity=0.110  Sum_probs=64.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhh-------hCCCcE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENA-------LTGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~a-------l~~ADi  112 (353)
                      ++|.|+||+|.+|.+++..|+..|.  +|++++++..  .....++..... ...+. ....+.+++       +.+.|+
T Consensus        27 k~vlITGasggIG~~~a~~L~~~G~--~Vv~~~R~~~~~~~~~~~l~~v~~-~~~Dl-~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         27 KTAIVTGGYSGLGLETTRALAQAGA--HVIVPARRPDVAREALAGIDGVEV-VMLDL-ADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhhCeE-EEccC-CCHHHHHHHHHHHHhcCCCCCE
Confidence            4899999999999999999999987  8999998752  222222321110 00111 000111111       246899


Q ss_pred             EEEcCCCCCCCC----CCHHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          113 VIIPAGVPRKPG----MTRDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~~~g----~~r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +|+.+|....+.    ......+..|...    .+.+.+.+.+. ..+.|+++|.
T Consensus       103 li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS  156 (315)
T PRK06196        103 LINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSS  156 (315)
T ss_pred             EEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECC
Confidence            999998642211    1123344556554    55555555543 2356666654

>PRK06198 short chain dehydrogenase; Provisional

Probab=96.44  E-value=0.16  Score=46.61  Aligned_cols=115  Identities=15%  Similarity=0.202  Sum_probs=64.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcE-EEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------  106 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~e-l~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------  106 (353)
                      .++|.|+||+|.+|+.++..|...|.  + |+++|++.  ......++...  ...+..+. .-++.   .++       
T Consensus         6 ~k~vlItGa~g~iG~~la~~l~~~G~--~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          6 GKVALVTGGTQGLGAAIARAFAERGA--AGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCC--CeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999998887  5 99999865  22222233221  12222111 11222   222       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618          107 LTGMDLVIIPAGVPRKP---GMTRD---DLFNINAGIVRTLCEG----IAKCCPNATVNLISN  159 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~---g~~r~---~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  159 (353)
                      +.+.|++|.++|.....   ..+..   ..+..|+.....+.+.    +.+....+.++++|.
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss  144 (260)
T PRK06198         82 FGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGS  144 (260)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECC
Confidence            23689999998865321   12222   2345666555444444    433333355665553

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.017  Score=53.02  Aligned_cols=35  Identities=23%  Similarity=0.259  Sum_probs=31.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|++.
T Consensus         7 ~~~vlItGasggIG~~~a~~l~~~G~--~v~~~~r~~   41 (255)
T PRK06057          7 GRVAVITGGGSGIGLATARRLAAEGA--TVVVGDIDP   41 (255)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHcCC--EEEEEeCCH
Confidence            35899999999999999999999887  899999875

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=96.42  E-value=0.011  Score=56.18  Aligned_cols=63  Identities=16%  Similarity=0.304  Sum_probs=45.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||++||. |.+|+.++..|...|+  ++.++|+++.   ..++....    ...   ..+..++.++||+||++.
T Consensus         1 m~Ig~IGl-G~MG~~ma~~L~~~G~--~v~v~~~~~~---~~~~~~~g----~~~---~~s~~~~~~~advVi~~v   63 (292)
T PRK15059          1 MKLGFIGL-GIMGTPMAINLARAGH--QLHVTTIGPV---ADELLSLG----AVS---VETARQVTEASDIIFIMV   63 (292)
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEeCCHh---HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence            58999998 9999999999999997  8889998652   12232211    111   124567789999999984

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=96.42  E-value=0.022  Score=51.49  Aligned_cols=71  Identities=21%  Similarity=0.315  Sum_probs=44.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc------hhhhhCCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ------LENALTGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d------~~~al~~ADiVI  114 (353)
                      |+|.|+||+|.+|..++..|++.+....+++.+.+....    ..+    ..+..+. .-+|      +.+.+...|++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~----~~~----~~~~~~~~Dls~~~~~~~~~~~~~~id~li   72 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD----FQH----DNVQWHALDVTDEAEIKQLSEQFTQLDWLI   72 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc----ccc----CceEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence            589999999999999999998875433677766654211    111    1111110 1111      223456889999


Q ss_pred             EcCCCC
Q 018618          115 IPAGVP  120 (353)
Q Consensus       115 i~ag~~  120 (353)
                      .++|..
T Consensus        73 ~~aG~~   78 (235)
T PRK09009         73 NCVGML   78 (235)
T ss_pred             ECCccc
Confidence            999865

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.42  E-value=0.049  Score=50.03  Aligned_cols=153  Identities=16%  Similarity=0.129  Sum_probs=81.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      .+++.|+||+|.+|++++..|++.|.  +|+++|+++ ......++....  ..+..+. .-+|.   +++       +.
T Consensus         8 ~k~vlVtGas~gIG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          8 GKVVVVTGAAQGIGRGVALRAAAEGA--RVVLVDRSELVHEVAAELRAAG--GEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCchHHHHHHHHHHhcC--CeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999987  899999875 222223333211  1221110 11222   222       24


Q ss_pred             CCcEEEEcCCCCC--CC--CCCH---HHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPR--KP--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~--~~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..+|...  .+  ..+.   ...+..|+-    ..+.+.+.+.+.. .+.|+++|.....             +
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~-------------~  149 (260)
T PRK12823         84 RIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR-------------G  149 (260)
T ss_pred             CCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc-------------C
Confidence            6799999987431  11  1222   223344543    4445555555433 3455555532110             0


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                       +..-.++.+......+-+.+++.+.  +..|++..+
T Consensus       150 -~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  183 (260)
T PRK12823        150 -INRVPYSAAKGGVNALTASLAFEYA--EHGIRVNAV  183 (260)
T ss_pred             -CCCCccHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence             1112355554444556677777763  334443333

>PRK07574 formate dehydrogenase; Provisional

Probab=96.42  E-value=0.022  Score=56.42  Aligned_cols=100  Identities=17%  Similarity=0.215  Sum_probs=63.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ..++|+|+|. |.+|+.+|..|..-|.  +|+.+|+........  ...    .+..   ..++++.++.||+|++....
T Consensus       191 ~gktVGIvG~-G~IG~~vA~~l~~fG~--~V~~~dr~~~~~~~~--~~~----g~~~---~~~l~ell~~aDvV~l~lPl  258 (385)
T PRK07574        191 EGMTVGIVGA-GRIGLAVLRRLKPFDV--KLHYTDRHRLPEEVE--QEL----GLTY---HVSFDSLVSVCDVVTIHCPL  258 (385)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCCchhhH--hhc----Ccee---cCCHHHHhhcCCEEEEcCCC
Confidence            3469999999 9999999999987777  999999865211111  110    1221   13578899999999998421


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                      .           ..+-.++.  .+.+....|.+++|+++  ..+|.-
T Consensus       259 t-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe~  292 (385)
T PRK07574        259 H-----------PETEHLFD--ADVLSRMKRGSYLVNTARGKIVDRD  292 (385)
T ss_pred             C-----------HHHHHHhC--HHHHhcCCCCcEEEECCCCchhhHH
Confidence            1           11222221  23334445789999886  445543

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.40  E-value=0.15  Score=46.39  Aligned_cols=147  Identities=14%  Similarity=0.126  Sum_probs=75.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------  106 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------  106 (353)
                      ..+|.|+||+|++|++++..|++.|.  ++++...+.   ......++....  ..+..+. .-++   ...+       
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS--LVVVNAKKRAEEMNETLKMVKENG--GEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHcC--CeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            35899999999999999999998887  666654332   122222222211  1111110 1111   1122       


Q ss_pred             hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          107 LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      +...|+||+++|.....   +.+.   .+.+..|......+++.+.++- +.+.++++|.-..            ..+.+
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~------------~~~~~  149 (252)
T PRK06077         82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG------------IRPAY  149 (252)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc------------cCCCC
Confidence            34679999999863211   1222   2334555555455555444432 2355666554111            11233


Q ss_pred             CCceEeechhhHHHHHHHHHHHhC
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +.-.++.+......+-..+++.++
T Consensus       150 ~~~~Y~~sK~~~~~~~~~l~~~~~  173 (252)
T PRK06077        150 GLSIYGAMKAAVINLTKYLALELA  173 (252)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHh
Confidence            334455544334455566777764

>PRK08219 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.035  Score=49.68  Aligned_cols=74  Identities=22%  Similarity=0.241  Sum_probs=45.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCe-EEE-EeCCCchhhhhC---CCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRG-FLGQPQLENALT---GMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~-v~~-~~~t~d~~~al~---~ADiVIi~  116 (353)
                      +++.|+||+|.+|+.++..|++. .  +|+++|++...  ..++.+...... +.. .....+++++++   +.|+||++
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H--TLLLGGRPAER--LDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C--CEEEEeCCHHH--HHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            58999999999999999999887 5  89999986521  112221100011 111 101123344444   68999999


Q ss_pred             CCCC
Q 018618          117 AGVP  120 (353)
Q Consensus       117 ag~~  120 (353)
                      +|..
T Consensus        79 ag~~   82 (227)
T PRK08219         79 AGVA   82 (227)
T ss_pred             CCcC
Confidence            8864

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.077  Score=51.36  Aligned_cols=114  Identities=18%  Similarity=0.084  Sum_probs=64.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .++|.|+||+|.+|..++..|++.|.  +|+++++++  ++....++....  ..+..+. .-+|   .++++       
T Consensus         7 ~k~vlITGAs~GIG~aia~~la~~G~--~Vvl~~R~~~~l~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (330)
T PRK06139          7 GAVVVITGASSGIGQATAEAFARRGA--RLVLAARDEEALQAVAEECRALG--AEVLVVPTDVTDADQVKALATQAASFG   82 (330)
T ss_pred             CCEEEEcCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999998  899999876  333333443321  1221110 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tN  159 (353)
                      ...|++|..+|.....   ..+   ....+..|+-...    ...+.+.+.. .+.+|+++.
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS  143 (330)
T PRK06139         83 GRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMIS  143 (330)
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcC
Confidence            4679999999864221   111   2234555554443    3444444332 455665543

>PLN00016 RNA-binding protein; Provisional

Probab=96.39  E-value=0.022  Score=55.94  Aligned_cols=35  Identities=26%  Similarity=0.144  Sum_probs=32.0

Q ss_pred             CCeEEEE----cCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAIL----GAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~Ii----Ga~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ++||.|+    ||+|++|++++..|+..|+  +|++++++.
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~--~V~~l~R~~   90 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH--EVTLFTRGK   90 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCC--EEEEEecCC
Confidence            4689999    9999999999999999998  999999875

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=96.39  E-value=0.18  Score=46.62  Aligned_cols=32  Identities=22%  Similarity=0.224  Sum_probs=28.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   76 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~   76 (353)
                      .+.|+||+|.+|.+++..|++.|.  +|++.+.+
T Consensus         3 ~~lITGas~gIG~~~a~~l~~~G~--~V~~~~~~   34 (267)
T TIGR02685         3 AAVVTGAAKRIGSSIAVALHQEGY--RVVLHYHR   34 (267)
T ss_pred             EEEEeCCCCcHHHHHHHHHHhCCC--eEEEEcCC
Confidence            688999999999999999999988  88887643

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.38  E-value=0.041  Score=51.05  Aligned_cols=33  Identities=24%  Similarity=0.461  Sum_probs=30.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus        34 ~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~   66 (245)
T PRK05690         34 RVLVVGL-GGLGCAASQYLAAAGV-GTLTLVDFDT   66 (245)
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence            9999999 9999999999999986 4999999864

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.081  Score=51.20  Aligned_cols=113  Identities=14%  Similarity=0.103  Sum_probs=64.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~  108 (353)
                      ++|.|+||+|.+|..++..|+..|.  +|+++++++  ......++....  ..+..+. .-+|   .+++       +.
T Consensus         9 k~vlITGas~gIG~~la~~la~~G~--~Vvl~~R~~~~l~~~~~~l~~~g--~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          9 QVVVITGASAGVGRATARAFARRGA--KVVLLARGEEGLEALAAEIRAAG--GEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            4899999999999999999999987  899999875  233333443221  1222111 1122   2222       23


Q ss_pred             CCcEEEEcCCCCCCC---CCCHH---HHHHHH----HHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMTRD---DLFNIN----AGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r~---~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ..|++|..+|.....   ..+..   ..+..|    +...+.+.+.+.+.. .+.+|+++.
T Consensus        85 ~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS  144 (334)
T PRK07109         85 PIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGS  144 (334)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCC
Confidence            689999998853211   11222   223344    444555666665432 355665553

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=96.38  E-value=0.05  Score=49.63  Aligned_cols=108  Identities=19%  Similarity=0.274  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe----CCCchhhhh-------CC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL----GQPQLENAL-------TG  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al-------~~  109 (353)
                      .+++.|+||+|.+|+.++..|++.|.  +++++|.+.       +....  ..+..+.    ...++++.+       ..
T Consensus         8 ~k~vlItGas~~iG~~la~~l~~~G~--~v~~~~~~~-------~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (252)
T PRK08220          8 GKTVWVTGAAQGIGYAVALAFVEAGA--KVIGFDQAF-------LTQED--YPFATFVLDVSDAAAVAQVCQRLLAETGP   76 (252)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecch-------hhhcC--CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            35899999999999999999999888  899999864       11000  1111110    011222222       34


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      .|+||..+|.....   ..+   ....+..|......+++.+..+   .+.+.++++|.
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss  135 (252)
T PRK08220         77 LDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGS  135 (252)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence            79999998864211   112   2234566766555555554322   23345555554

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.38  E-value=0.041  Score=49.84  Aligned_cols=102  Identities=22%  Similarity=0.286  Sum_probs=59.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------  107 (353)
                      ++|.|+||+|.+|..++..|++.|.  +++++ +.+.  .......+...  ...+..... -+|   +.+.+       
T Consensus         6 ~~ilI~Gasg~iG~~la~~l~~~g~--~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          6 KVAIVTGASGGIGRAIAELLAKEGA--KVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4899999999999999999998887  77887 8765  22222223321  122322211 122   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHh
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK  147 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~  147 (353)
                      .+.|+||..+|.....   ..+   ....+..|......+.+.+..
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  127 (247)
T PRK05565         82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALP  127 (247)
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            2789999998854211   112   233456677765555555543

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.38  Score=44.28  Aligned_cols=157  Identities=13%  Similarity=0.072  Sum_probs=80.0

Q ss_pred             CeEEEEcCCC-CcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhh-------h
Q 018618           42 FKVAILGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENA-------L  107 (353)
Q Consensus        42 ~KI~IiGa~G-~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l  107 (353)
                      +++.|+||+| .+|..++..|+..|.  +|++.|.+.  ......++........+..+.. -++   .+++       +
T Consensus        18 k~vlItG~sg~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   95 (262)
T PRK07831         18 KVVLVTAAAGTGIGSATARRALEEGA--RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL   95 (262)
T ss_pred             CEEEEECCCcccHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4899999977 599999999999987  799999865  2222333332111112322211 112   2222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|++|..+|.....   ..+   ..+.+..|+....    ...+.+.+....+.+++++......            .
T Consensus        96 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~------------~  163 (262)
T PRK07831         96 GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWR------------A  163 (262)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC------------C
Confidence            3679999999864211   111   2233445554443    3344444333245555544322111            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+|..+.  +..|++..+
T Consensus       164 ~~~~~~Y~~sKaal~~~~~~la~e~~--~~gI~v~~i  198 (262)
T PRK07831        164 QHGQAHYAAAKAGVMALTRCSALEAA--EYGVRINAV  198 (262)
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence            22233455543333455666666653  445554444

>PRK07454 short chain dehydrogenase; Provisional

Probab=96.37  E-value=0.038  Score=50.20  Aligned_cols=114  Identities=18%  Similarity=0.208  Sum_probs=64.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~al-------  107 (353)
                      ++++.|+||+|.+|..++..|++.|.  +|+++|+++  ......++....  ..+..+. .-+|++   .++       
T Consensus         6 ~k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (241)
T PRK07454          6 MPRALITGASSGIGKATALAFAKAGW--DLALVARSQDALEALAAELRSTG--VKAAAYSIDLSNPEAIAPGIAELLEQF   81 (241)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhCC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45899999999999999999999988  899999875  222222232211  1222211 112222   222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHHhhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN  159 (353)
                      .+.|++|..+|.....   ..+   ....+..|+.....+.    +.+.+. ..+.++++|.
T Consensus        82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~isS  142 (241)
T PRK07454         82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRAR-GGGLIINVSS  142 (241)
T ss_pred             CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCcEEEEEcc
Confidence            3589999998864321   112   2233455655444444    444433 2345565554

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=96.36  E-value=0.14  Score=46.60  Aligned_cols=32  Identities=28%  Similarity=0.303  Sum_probs=27.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV   75 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~   75 (353)
                      ++|.|+||+|.+|+.++..|++.|.  ++++.+.
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~--~v~~~~~   34 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGW--SVGINYA   34 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCC--EEEEEeC
Confidence            4799999999999999999999887  7777654

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.016  Score=52.57  Aligned_cols=115  Identities=18%  Similarity=0.185  Sum_probs=65.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhh---CCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENAL---TGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al---~~ADiVIi~  116 (353)
                      .+++.|+||+|.+|.+++..|+..|.  +|++++++....  .++........+.. .....+.++++   ...|+||..
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~   84 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGA--RVVAAARNAAAL--DRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNC   84 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEEC
Confidence            35899999999999999999999887  899999865211  11211100011111 11111222333   357999999


Q ss_pred             CCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC----CCcEEEEecC
Q 018618          117 AGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC----PNATVNLISN  159 (353)
Q Consensus       117 ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~----p~a~viv~tN  159 (353)
                      +|.....   ..+   ....+..|+.....+++.+.+..    ..+.++++|.
T Consensus        85 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  137 (245)
T PRK07060         85 AGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS  137 (245)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEcc
Confidence            8864321   122   22345567776666666665432    2255666553

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.34  E-value=0.026  Score=52.16  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=31.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|.++
T Consensus         6 ~k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~   40 (263)
T PRK06200          6 GQVALITGGGSGIGRALVERFLAEGA--RVAVLERSA   40 (263)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            35899999999999999999999988  899999875

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=96.33  E-value=0.023  Score=53.27  Aligned_cols=97  Identities=15%  Similarity=0.219  Sum_probs=64.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-C-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||++||+ |++|..++..|...+ + ..+|+..|+++.+..  ++...- +...     ++|..++...+|+||++..
T Consensus         1 ~~~IgfIG~-G~Mg~Ai~~gl~~~g~~~~~~I~v~~~~~e~~~--~l~~~~-g~~~-----~~~~~~~~~~advv~LavK   71 (266)
T COG0345           1 MMKIGFIGA-GNMGEAILSGLLKSGALPPEEIIVTNRSEEKRA--ALAAEY-GVVT-----TTDNQEAVEEADVVFLAVK   71 (266)
T ss_pred             CceEEEEcc-CHHHHHHHHHHHhcCCCCcceEEEeCCCHHHHH--HHHHHc-CCcc-----cCcHHHHHhhCCEEEEEeC
Confidence            479999999 999999999999888 3 368888887652221  233211 1111     2455688899999999862


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                          |            +.+.+++..++...++-+||-+.-.+.
T Consensus        72 ----P------------q~~~~vl~~l~~~~~~~lvISiaAGv~   99 (266)
T COG0345          72 ----P------------QDLEEVLSKLKPLTKDKLVISIAAGVS   99 (266)
T ss_pred             ----h------------HhHHHHHHHhhcccCCCEEEEEeCCCC
Confidence                2            236677777776445666665554443

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.33  E-value=0.039  Score=50.15  Aligned_cols=96  Identities=22%  Similarity=0.328  Sum_probs=66.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      +||+|||. |.+|..+.-.+..... +.-+.+||.+..+..  .+...-..+..      +++.+.+.+.|++|.+|+  
T Consensus         1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~--~~~~~~~~~~~------s~ide~~~~~DlvVEaAS--   69 (255)
T COG1712           1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDEEKAK--ELEASVGRRCV------SDIDELIAEVDLVVEAAS--   69 (255)
T ss_pred             CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCHHHHH--HHHhhcCCCcc------ccHHHHhhccceeeeeCC--
Confidence            68999998 9999999888876643 556788888753322  23322111111      345566799999999985  


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                                    .+.+++++.++-+.+.|.+|+-++--+|
T Consensus        70 --------------~~Av~e~~~~~L~~g~d~iV~SVGALad   97 (255)
T COG1712          70 --------------PEAVREYVPKILKAGIDVIVMSVGALAD   97 (255)
T ss_pred             --------------HHHHHHHhHHHHhcCCCEEEEechhccC
Confidence                          3458889999888888887776654444

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.18  Score=45.69  Aligned_cols=35  Identities=17%  Similarity=0.223  Sum_probs=31.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .++|.|+||+|.+|.+++..|+..|.  +|+++++++
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~--~V~~~~r~~   40 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGA--TVILVARHQ   40 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence            35899999999999999999999887  899999876

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.32  E-value=0.026  Score=54.99  Aligned_cols=74  Identities=19%  Similarity=0.272  Sum_probs=49.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----c----------------HHH--HHHHhcCCCCCeEEEEe
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----T----------------PGV--TADISHMDTGAVVRGFL   98 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~----------------~~~--~~dl~~~~~~~~v~~~~   98 (353)
                      .||+|+|+ |.+|+.++..|+..|+ .+|.|+|.+.     +                +..  +..+........+..+.
T Consensus        25 ~~VlIiG~-GglGs~va~~La~aGv-g~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~  102 (338)
T PRK12475         25 KHVLIVGA-GALGAANAEALVRAGI-GKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV  102 (338)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence            48999999 9999999999999986 4899999874     0                111  12233322223444432


Q ss_pred             C---CCchhhhhCCCcEEEEcC
Q 018618           99 G---QPQLENALTGMDLVIIPA  117 (353)
Q Consensus        99 ~---t~d~~~al~~ADiVIi~a  117 (353)
                      .   ..+.++.++++|+||.+.
T Consensus       103 ~~~~~~~~~~~~~~~DlVid~~  124 (338)
T PRK12475        103 TDVTVEELEELVKEVDLIIDAT  124 (338)
T ss_pred             ccCCHHHHHHHhcCCCEEEEcC
Confidence            1   134567789999999984

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.31  E-value=0.025  Score=55.68  Aligned_cols=34  Identities=26%  Similarity=0.456  Sum_probs=30.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .||+|+|+ |-+|+.++..|+..|. .+|+++|.+.
T Consensus        42 ~~VliiG~-GglG~~v~~~La~~Gv-g~i~ivD~D~   75 (370)
T PRK05600         42 ARVLVIGA-GGLGCPAMQSLASAGV-GTITLIDDDT   75 (370)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence            39999999 9999999999999886 4899999873

>PRK06123 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.17  Score=45.86  Aligned_cols=156  Identities=16%  Similarity=0.130  Sum_probs=79.8

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCe-EEE-EeCCCchhhhh-------CCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAV-VRG-FLGQPQLENAL-------TGM  110 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~-v~~-~~~t~d~~~al-------~~A  110 (353)
                      .+.|+||+|.+|++++..|+..|.  .+++.+.+.   ......++........ +.. .....+.++++       ...
T Consensus         4 ~~lVtG~~~~iG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          4 VMIITGASRGIGAATALLAAERGY--AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC--eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999887  778877544   1222223332211111 111 11112222333       367


Q ss_pred             cEEEEcCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHhh----C--CCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          111 DLVIIPAGVPRKP----GMTR---DDLFNINAGIVRTLCEGIAKC----C--PNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       111 DiVIi~ag~~~~~----g~~r---~~~~~~N~~i~~~i~~~i~~~----~--p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      |+||.++|.....    ..+.   ...+..|+.....+.+.+.++    .  .++.++++|......            +
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------~  149 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL------------G  149 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC------------C
Confidence            9999998864321    1122   234566766654444443332    1  235566666543211            1


Q ss_pred             CCCC-ceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPK-KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~-kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+.. -.++.+......+-..+++.+.  +..+++.++
T Consensus       150 ~~~~~~~Y~~sKaa~~~~~~~la~~~~--~~~i~v~~i  185 (248)
T PRK06123        150 SPGEYIDYAASKGAIDTMTIGLAKEVA--AEGIRVNAV  185 (248)
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            1111 1245444334456666777762  344544443

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.31  E-value=0.032  Score=49.28  Aligned_cols=104  Identities=16%  Similarity=0.166  Sum_probs=62.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||+||||+|.+|+.++.....+|+  |+.-+=+++.+-.+.  ..... ..-..+ ..+.+.+++.+-|+||-+-|.+.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGH--eVTAivRn~~K~~~~--~~~~i-~q~Dif-d~~~~a~~l~g~DaVIsA~~~~~   74 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGH--EVTAIVRNASKLAAR--QGVTI-LQKDIF-DLTSLASDLAGHDAVISAFGAGA   74 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCC--eeEEEEeChHhcccc--cccee-eccccc-ChhhhHhhhcCCceEEEeccCCC
Confidence            7999999999999999999999999  888888776221110  10000 011112 12334578999999999866442


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                       ++..     ..-.+....+...++.. -...+++++
T Consensus        75 -~~~~-----~~~~k~~~~li~~l~~a-gv~RllVVG  104 (211)
T COG2910          75 -SDND-----ELHSKSIEALIEALKGA-GVPRLLVVG  104 (211)
T ss_pred             -CChh-----HHHHHHHHHHHHHHhhc-CCeeEEEEc
Confidence             1211     11122244455555532 345667765

>PTZ00431 pyrroline carboxylate reductase; Provisional

Probab=96.30  E-value=0.023  Score=53.14  Aligned_cols=90  Identities=13%  Similarity=0.180  Sum_probs=57.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCC--cEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~--~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .|||+|||+ |.+|++++..|...+..  .+++.+|+++..     +       ....   ..+..++++++|+||++.-
T Consensus         3 ~mkI~iIG~-G~mG~ai~~~l~~~~~~~~~~i~~~~~~~~~-----~-------~~~~---~~~~~~~~~~~D~Vilavk   66 (260)
T PTZ00431          3 NIRVGFIGL-GKMGSALAYGIENSNIIGKENIYYHTPSKKN-----T-------PFVY---LQSNEELAKTCDIIVLAVK   66 (260)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCCCcceEEEECCChhc-----C-------CeEE---eCChHHHHHhCCEEEEEeC
Confidence            479999998 99999999999887642  358888876411     0       0111   1344567889999999841


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                       |               ..+.++++.+..+-++..||.+.+-+.
T Consensus        67 -p---------------~~~~~vl~~i~~~l~~~~iIS~~aGi~   94 (260)
T PTZ00431         67 -P---------------DLAGKVLLEIKPYLGSKLLISICGGLN   94 (260)
T ss_pred             -H---------------HHHHHHHHHHHhhccCCEEEEEeCCcc
Confidence             1               124455555554333344555556555

>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=96.29  E-value=0.03  Score=60.06  Aligned_cols=92  Identities=18%  Similarity=0.303  Sum_probs=59.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .||+|||+ |.+|..++..+...|+..+|..+|+++.. ..+.+   ..  ....   ..+++.+++.++|+||++... 
T Consensus         4 ~~I~IIG~-G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~---~g--~~~~---~~~~~~~~~~~aDvVilavp~-   73 (735)
T PRK14806          4 GRVVVIGL-GLIGGSFAKALRERGLAREVVAVDRRAKSLELAVS---LG--VIDR---GEEDLAEAVSGADVIVLAVPV-   73 (735)
T ss_pred             cEEEEEee-CHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHH---CC--CCCc---ccCCHHHHhcCCCEEEECCCH-
Confidence            58999998 99999999999988854479999987622 12221   11  1101   124567788999999998531 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                                     ..+.++++.+..+. ++.+|+.++
T Consensus        74 ---------------~~~~~vl~~l~~~~~~~~ii~d~~   97 (735)
T PRK14806         74 ---------------LAMEKVLADLKPLLSEHAIVTDVG   97 (735)
T ss_pred             ---------------HHHHHHHHHHHHhcCCCcEEEEcC
Confidence                           12455555665554 455555444

>PRK08818 prephenate dehydrogenase; Provisional

Probab=96.29  E-value=0.031  Score=55.00  Aligned_cols=56  Identities=25%  Similarity=0.260  Sum_probs=43.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+||+|||.+|.+|..++..|.+.. ..+|..+|..+          .          ..++.++++++||+||++.
T Consensus         4 ~~~I~IIGl~GliGgslA~alk~~~-~~~V~g~D~~d----------~----------~~~~~~~~v~~aDlVilav   59 (370)
T PRK08818          4 QPVVGIVGSAGAYGRWLARFLRTRM-QLEVIGHDPAD----------P----------GSLDPATLLQRADVLIFSA   59 (370)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcC-CCEEEEEcCCc----------c----------ccCCHHHHhcCCCEEEEeC
Confidence            4599999988999999999998752 33889999731          0          1134567889999999984

>PLN02712 arogenate dehydrogenase

Probab=96.28  E-value=0.027  Score=59.71  Aligned_cols=67  Identities=18%  Similarity=0.197  Sum_probs=46.2

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh-CCCcEEEEc
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIP  116 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-~~ADiVIi~  116 (353)
                      ..+++||+|||. |.+|..++..|...|+  +|..+|.+.....+.++   .    +..+   +++++.+ ++||+||++
T Consensus        49 ~~~~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~A~~~---G----v~~~---~d~~e~~~~~aDvViLa  115 (667)
T PLN02712         49 NTTQLKIAIIGF-GNYGQFLAKTLISQGH--TVLAHSRSDHSLAARSL---G----VSFF---LDPHDLCERHPDVILLC  115 (667)
T ss_pred             cCCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHc---C----CEEe---CCHHHHhhcCCCEEEEc
Confidence            344589999998 9999999999998886  89999987422111111   1    1222   3455534 579999998


Q ss_pred             C
Q 018618          117 A  117 (353)
Q Consensus       117 a  117 (353)
                      .
T Consensus       116 v  116 (667)
T PLN02712        116 T  116 (667)
T ss_pred             C
Confidence            4

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.27  E-value=0.046  Score=47.99  Aligned_cols=33  Identities=39%  Similarity=0.587  Sum_probs=29.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|+|+ |.+|+.++..|+..|. .+++|+|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gv-g~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGV-GNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCCE
Confidence            6899999 9999999999999887 4899999874

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.26  E-value=0.066  Score=49.08  Aligned_cols=99  Identities=22%  Similarity=0.309  Sum_probs=62.7

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCC----cHH-----HHHHHhcCCCCCeEEEEeCCCchhhhhCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN----TPG-----VTADISHMDTGAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~----~~~-----~~~dl~~~~~~~~v~~~~~t~d~~~al~~  109 (353)
                      +..||.|+|| |.+|..++..|...|. .++|+++|++.    .+.     ...++.+......   .  ..++++++++
T Consensus        24 ~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~---~--~~~l~~~l~~   97 (226)
T cd05311          24 EEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK---T--GGTLKEALKG   97 (226)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc---c--cCCHHHHHhc
Confidence            4469999999 9999999999988776 23799999983    111     1122222110011   1  1356788999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      +|++|.+.+    +|+-.           .++.+.+   +++.+++..+||..
T Consensus        98 ~dvlIgaT~----~G~~~-----------~~~l~~m---~~~~ivf~lsnP~~  132 (226)
T cd05311          98 ADVFIGVSR----PGVVK-----------KEMIKKM---AKDPIVFALANPVP  132 (226)
T ss_pred             CCEEEeCCC----CCCCC-----------HHHHHhh---CCCCEEEEeCCCCC
Confidence            999999864    34311           1333333   36777777889974

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.25  E-value=0.062  Score=49.26  Aligned_cols=113  Identities=19%  Similarity=0.177  Sum_probs=64.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhh-------hhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LEN-------ALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~-------al~  108 (353)
                      +++.|+||+|.+|..++..|+..|.  +|++++++.  .+....++....  ..+..+. .-+|   .++       .+.
T Consensus        10 k~vlVtGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867         10 KRALITGASTGIGKRVALAYVEAGA--QVAIAARHLDALEKLADEIGTSG--GKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999988  899999875  222333343321  2222211 1122   112       234


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEec
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLIS  158 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~t  158 (353)
                      ..|++|..+|.....   ..+.   ...+..|+.....+.+.    +.+....+.+++++
T Consensus        86 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~s  145 (253)
T PRK05867         86 GIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTA  145 (253)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            789999998864311   1222   23345565544444444    43333335555554

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=96.25  E-value=0.017  Score=54.19  Aligned_cols=33  Identities=12%  Similarity=0.255  Sum_probs=29.8

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||.|+||+|++|++++..|.+.|.  +|..+.++.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~--~V~~~~R~~   33 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASV--PFLVASRSS   33 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCC--cEEEEeCCC
Confidence            589999999999999999998887  888888875

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.24  E-value=0.029  Score=54.61  Aligned_cols=34  Identities=24%  Similarity=0.307  Sum_probs=30.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .||.|+|+ |.+|+.++..|+..|+ .+|.++|.+.
T Consensus        25 ~~VlVvG~-GglGs~va~~La~aGv-g~i~lvD~D~   58 (339)
T PRK07688         25 KHVLIIGA-GALGTANAEMLVRAGV-GKVTIVDRDY   58 (339)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCCc
Confidence            39999999 9999999999999987 4999999874

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.23  E-value=0.029  Score=51.40  Aligned_cols=34  Identities=32%  Similarity=0.476  Sum_probs=30.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus        22 ~~VlivG~-GglGs~va~~La~~Gv-g~i~lvD~D~   55 (228)
T cd00757          22 ARVLVVGA-GGLGSPAAEYLAAAGV-GKLGLVDDDV   55 (228)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEcCCE
Confidence            49999999 9999999999999986 4999999764

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PLN03139 formate dehydrogenase; Provisional

Probab=96.20  E-value=0.03  Score=55.42  Aligned_cols=100  Identities=21%  Similarity=0.200  Sum_probs=63.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ..++|+|+|. |.||+.++..|..-|.  +|+.+|.........  .+.    .+..   ..++++.+++||+|++....
T Consensus       198 ~gktVGIVG~-G~IG~~vA~~L~afG~--~V~~~d~~~~~~~~~--~~~----g~~~---~~~l~ell~~sDvV~l~lPl  265 (386)
T PLN03139        198 EGKTVGTVGA-GRIGRLLLQRLKPFNC--NLLYHDRLKMDPELE--KET----GAKF---EEDLDAMLPKCDVVVINTPL  265 (386)
T ss_pred             CCCEEEEEee-cHHHHHHHHHHHHCCC--EEEEECCCCcchhhH--hhc----Ccee---cCCHHHHHhhCCEEEEeCCC
Confidence            4569999998 9999999999987776  899999864211111  111    1111   13678899999999997421


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                      .           ..+-.++.  .+.+....|++++|+.+  ..+|.-
T Consensus       266 t-----------~~T~~li~--~~~l~~mk~ga~lIN~aRG~iVDe~  299 (386)
T PLN03139        266 T-----------EKTRGMFN--KERIAKMKKGVLIVNNARGAIMDTQ  299 (386)
T ss_pred             C-----------HHHHHHhC--HHHHhhCCCCeEEEECCCCchhhHH
Confidence            1           11222221  23444445889999886  445533

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.20  E-value=0.014  Score=52.97  Aligned_cols=92  Identities=14%  Similarity=0.161  Sum_probs=58.4

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE--EeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~--~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |+|+||+|.+|+.++..|...+.  +|..+=++........+.+..  ..+..  +.....+.++|+|+|.|+++.+...
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~--~V~~l~R~~~~~~~~~l~~~g--~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~   76 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF--SVRALVRDPSSDRAQQLQALG--AEVVEADYDDPESLVAALKGVDAVFSVTPPSH   76 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG--CEEEEESSSHHHHHHHHHHTT--TEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCC--CcEEEEeccchhhhhhhhccc--ceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence            78999999999999999998776  777777665333344455432  22211  1111355678999999999865332


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                         ..+       .+....+++...+.+
T Consensus        77 ---~~~-------~~~~~~li~Aa~~ag   94 (233)
T PF05368_consen   77 ---PSE-------LEQQKNLIDAAKAAG   94 (233)
T ss_dssp             ---CCH-------HHHHHHHHHHHHHHT
T ss_pred             ---hhh-------hhhhhhHHHhhhccc
Confidence               111       333456666766665

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=96.20  E-value=0.1  Score=47.18  Aligned_cols=114  Identities=14%  Similarity=0.150  Sum_probs=63.7

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhh-------hCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG-QPQ---LENA-------LTG  109 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l~~  109 (353)
                      |.|+||+|.+|.+++..|++.|.  ++++++...   ......++.+..  ..+..+.. -+|   .+++       +..
T Consensus         1 vlItGas~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   76 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGF--EICVHYHSGRSDAESVVSAIQAQG--GNARLLQFDVADRVACRTLLEADIAEHGA   76 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999988  888887643   222233343321  22222211 112   1222       234


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCC
Q 018618          110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPV  161 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv  161 (353)
                      -|.+|..+|.....   ..+   ....+..|+.....+.+.+    .+..+.+.++++|...
T Consensus        77 i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~  138 (239)
T TIGR01831        77 YYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVS  138 (239)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchh
Confidence            58899988864322   122   3345666766555554433    2223456666666543

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1

Probab=96.20  E-value=0.028  Score=53.04  Aligned_cols=101  Identities=22%  Similarity=0.280  Sum_probs=70.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhC----CC-----CcEEEEEeCCC--cH------HHHHHHhcCCCCCeEEEEeCCCch
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKIN----PL-----VSVLHLYDVVN--TP------GVTADISHMDTGAVVRGFLGQPQL  103 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~----~~-----~~el~L~D~~~--~~------~~~~dl~~~~~~~~v~~~~~t~d~  103 (353)
                      ..||.|.|| |..|..++.+|...    |+     ...++++|.+.  .+      .....+.+.. ..  .   ...++
T Consensus        25 d~~iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~-~~--~---~~~~L   97 (279)
T cd05312          25 DQRILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKD-EE--K---EGKSL   97 (279)
T ss_pred             hcEEEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhc-Cc--c---cCCCH
Confidence            469999999 99999999877654    65     26899999875  11      1112222211 11  1   12578


Q ss_pred             hhhhC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          104 ENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       104 ~~al~--~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      +++++  ++|++|=+.+.+   |.           +.+++.+.|.+++++.+|+-.|||..
T Consensus        98 ~e~i~~v~ptvlIG~S~~~---g~-----------ft~evv~~Ma~~~~~PIIFaLSNPt~  144 (279)
T cd05312          98 LEVVKAVKPTVLIGLSGVG---GA-----------FTEEVVRAMAKSNERPIIFALSNPTS  144 (279)
T ss_pred             HHHHHhcCCCEEEEeCCCC---CC-----------CCHHHHHHHHhcCCCCEEEECCCcCC
Confidence            99999  999988775433   21           13578889999999999999999986

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=96.19  E-value=0.058  Score=51.61  Aligned_cols=105  Identities=19%  Similarity=0.142  Sum_probs=68.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cH--HHHHHHhcCCCCCeEEEEeCC-Cc---hhhhh--CC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TP--GVTADISHMDTGAVVRGFLGQ-PQ---LENAL--TG  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~--~~~~dl~~~~~~~~v~~~~~t-~d---~~~al--~~  109 (353)
                      ..+|.|+||+|++|+|.+..|...|+  +++.+|...   ..  ..+..+.+.  ...+.+.... .|   +++-|  ..
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy--~v~~vDNl~n~~~~sl~r~~~l~~~--~~~v~f~~~Dl~D~~~L~kvF~~~~   77 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGY--GVVIVDNLNNSYLESLKRVRQLLGE--GKSVFFVEGDLNDAEALEKLFSEVK   77 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCC--cEEEEecccccchhHHHHHHHhcCC--CCceEEEEeccCCHHHHHHHHhhcC
Confidence            35899999999999999999999999  999999755   11  122333332  1233332111 12   22222  34


Q ss_pred             CcEEEEcCCCCC-CCC-CCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          110 MDLVIIPAGVPR-KPG-MTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       110 ADiVIi~ag~~~-~~g-~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      -|-|++.|+... .+. +.+..+...|+-....+.+.+++++
T Consensus        78 fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~  119 (343)
T KOG1371|consen   78 FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN  119 (343)
T ss_pred             CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC
Confidence            677888876542 122 2346677889999999999999987

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.18  E-value=0.031  Score=51.77  Aligned_cols=34  Identities=26%  Similarity=0.418  Sum_probs=30.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus        25 ~~VlvvG~-GglGs~va~~La~~Gv-g~i~lvD~D~   58 (240)
T TIGR02355        25 SRVLIVGL-GGLGCAASQYLAAAGV-GNLTLLDFDT   58 (240)
T ss_pred             CcEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCc
Confidence            39999999 9999999999999986 4999999875

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.17  E-value=0.067  Score=52.52  Aligned_cols=113  Identities=19%  Similarity=0.235  Sum_probs=70.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH------HHH------HH--HhcCCCCCeEEEEeCCCchhhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP------GVT------AD--ISHMDTGAVVRGFLGQPQLENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~------~~~------~d--l~~~~~~~~v~~~~~t~d~~~al  107 (353)
                      ++|+|+|- |+||..+|..++..|.  .++-+|+++..      |..      .|  +........++.   |+|. +.+
T Consensus        10 ~~I~ViGL-GYVGLPlA~~fA~~G~--~ViG~DIn~~~Vd~ln~G~~~i~e~~~~~~v~~~v~~g~lra---Ttd~-~~l   82 (436)
T COG0677          10 ATIGVIGL-GYVGLPLAAAFASAGF--KVIGVDINQKKVDKLNRGESYIEEPDLDEVVKEAVESGKLRA---TTDP-EEL   82 (436)
T ss_pred             eEEEEEcc-ccccHHHHHHHHHcCC--ceEeEeCCHHHHHHHhCCcceeecCcHHHHHHHHHhcCCceE---ecCh-hhc
Confidence            69999998 9999999999999998  99999998711      100      00  111111234554   4676 557


Q ss_pred             CCCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEE-EEecCCCCchhHHH
Q 018618          108 TGMDLVIIPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCC-PNATV-NLISNPVNSTVPIA  168 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~v-iv~tNPv~~~t~~~  168 (353)
                      +.||++|++.-.|.+. .+..+.+       +.+-++.|.++- +...| +=.|-|....-.++
T Consensus        83 ~~~dv~iI~VPTPl~~~~~pDls~-------v~~aa~sIa~~L~kG~LVIlEST~~PGTTe~v~  139 (436)
T COG0677          83 KECDVFIICVPTPLKKYREPDLSY-------VESAARSIAPVLKKGDLVILESTTPPGTTEEVV  139 (436)
T ss_pred             ccCCEEEEEecCCcCCCCCCChHH-------HHHHHHHHHHhcCCCCEEEEecCCCCCcHHHHH
Confidence            8999999997766433 2223333       444555555554 33333 33467776554443

>PRK08324 short chain dehydrogenase; Validated

Probab=96.17  E-value=0.071  Score=56.73  Aligned_cols=114  Identities=20%  Similarity=0.268  Sum_probs=64.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .++|.|+||+|.+|+.++..|+..|.  +|+++|++.  .......+...   ..+..+. .-+|   .++++       
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga--~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGA--CVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            36899999999999999999999887  899999876  22222223321   1111110 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHH----HHHHHhhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  159 (353)
                      .+.|+||.++|.....   ..+.   ...+..|......+    .+.+++....+.+++++.
T Consensus       497 g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS  558 (681)
T PRK08324        497 GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIAS  558 (681)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECC
Confidence            3689999999864321   1122   22344555544444    444444333355665553

>PRK09134 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.061  Score=49.45  Aligned_cols=112  Identities=14%  Similarity=0.145  Sum_probs=64.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      +++.|+||+|.+|.+++..|.+.|.  ++++.+.+.   .......+.+..  ..+..+. .-+|   ..+++       
T Consensus        10 k~vlItGas~giG~~la~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134         10 RAALVTGAARRIGRAIALDLAAHGF--DVAVHYNRSRDEAEALAAEIRALG--RRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999998887  787777643   222222232211  2222221 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEe
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLI  157 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~  157 (353)
                      ...|+||..+|.....   ..+   ....+..|+.....+.+.+..+.   ..+.++++
T Consensus        86 ~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~  144 (258)
T PRK09134         86 GPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNM  144 (258)
T ss_pred             CCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEE
Confidence            3469999999853221   122   23456677766666666655543   23455544

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.17  E-value=0.019  Score=48.00  Aligned_cols=74  Identities=22%  Similarity=0.315  Sum_probs=48.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-------------------HH--HHHHHhcCCCCCeEEEEeC-
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-------------------PG--VTADISHMDTGAVVRGFLG-   99 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-------------------~~--~~~dl~~~~~~~~v~~~~~-   99 (353)
                      .||+|+|+ |.+|+.++..|+..|. .++.|+|.+..                   +.  ....+........++.+.. 
T Consensus         3 ~~v~iiG~-G~vGs~va~~L~~~Gv-~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    3 KRVLIIGA-GGVGSEVAKNLARSGV-GKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             -EEEEEST-SHHHHHHHHHHHHHTT-SEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHhCC-CceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            49999999 9999999999999887 59999998640                   11  1122332222344554321 


Q ss_pred             --CCchhhhhCCCcEEEEcC
Q 018618          100 --QPQLENALTGMDLVIIPA  117 (353)
Q Consensus       100 --t~d~~~al~~ADiVIi~a  117 (353)
                        ..+.++.++++|+||.+.
T Consensus        81 ~~~~~~~~~~~~~d~vi~~~  100 (135)
T PF00899_consen   81 IDEENIEELLKDYDIVIDCV  100 (135)
T ss_dssp             CSHHHHHHHHHTSSEEEEES
T ss_pred             cccccccccccCCCEEEEec
Confidence              123446678999999874

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.17  E-value=0.09  Score=48.55  Aligned_cols=115  Identities=14%  Similarity=0.130  Sum_probs=64.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEe----CCCchhhhh-----
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL----GQPQLENAL-----  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~----~t~d~~~al-----  107 (353)
                      +++|.|+||+|.+|.+++..|++.| .  .|++++++..   .....++.... ...+..+.    ...+.++.+     
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~--~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~   84 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPA--RVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA   84 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCC--eEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh
Confidence            3589999999999999999988874 6  8899998752   22334444321 11222211    111211112     


Q ss_pred             -CCCcEEEEcCCCCCCCCC---CH---HHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecC
Q 018618          108 -TGMDLVIIPAGVPRKPGM---TR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~g~---~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  159 (353)
                       .+.|++|..+|.......   +.   .+.+..|+...    +.+.+.+.+... +.++++|.
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~-~~iv~isS  146 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGF-GQIIAMSS  146 (253)
T ss_pred             cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCC-ceEEEEec
Confidence             379999998876432111   11   12356665433    456666665543 45555543

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=96.16  E-value=0.36  Score=44.43  Aligned_cols=147  Identities=14%  Similarity=0.203  Sum_probs=76.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---h-------hh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NA  106 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~a  106 (353)
                      .+++.|+||++.+|.+++..|++.|.  +|++.+.+.   ......++.... ...+..+. .-+|.   +       +.
T Consensus         8 ~k~vlItGas~gIG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          8 GKTLVISGGTRGIGKAIVYEFAQSGV--NIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999999987  788876433   222333343211 11222211 11221   1       12


Q ss_pred             hCCCcEEEEcCCCCCC-------C--CCCH---HHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHH
Q 018618          107 LTGMDLVIIPAGVPRK-------P--GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  170 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~-------~--g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~  170 (353)
                      +...|++|..+|....       +  ..+.   ...+..|+.    ..+.+.+.+++. +.+.|+++|......      
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------  157 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSSTGNLV------  157 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEecccccc------
Confidence            3468999999874211       1  0111   122333433    334455555432 345566665433211      


Q ss_pred             HHHHhCCCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          171 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       171 ~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                            ..|..-.++.+......+-+.+++.++
T Consensus       158 ------~~~~~~~Y~asK~a~~~~~~~la~el~  184 (260)
T PRK08416        158 ------YIENYAGHGTSKAAVETMVKYAATELG  184 (260)
T ss_pred             ------CCCCcccchhhHHHHHHHHHHHHHHhh
Confidence                  112222355555555567777777764

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=96.16  E-value=0.019  Score=58.27  Aligned_cols=98  Identities=13%  Similarity=0.194  Sum_probs=58.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC-CCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~-~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      +|+|||. |.+|.++|..|+..|+  +|+++|+++.+  +.++... .....+.......++.++++++|+|++...   
T Consensus         1 ~IG~IGL-G~MG~~mA~nL~~~G~--~V~v~drt~~~--~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~---   72 (467)
T TIGR00873         1 DIGVIGL-AVMGSNLALNMADHGF--TVSVYNRTPEK--TDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVK---   72 (467)
T ss_pred             CEEEEee-HHHHHHHHHHHHhcCC--eEEEEeCCHHH--HHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECC---
Confidence            4899999 9999999999999998  99999987622  2223221 101112222111233334567998888742   


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCC
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  160 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  160 (353)
                       ++           +.+.++.+.+..+- ++.+||..||-
T Consensus        73 -~~-----------~~v~~Vi~~l~~~L~~g~iIID~gns  100 (467)
T TIGR00873        73 -AG-----------APVDAVINQLLPLLEKGDIIIDGGNS  100 (467)
T ss_pred             -Cc-----------HHHHHHHHHHHhhCCCCCEEEECCCc
Confidence             11           11333444554443 67778888763

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>PF03949 Malic_M: Malic enzyme, NAD binding domain; InterPro: IPR012302 Malic enzymes (malate oxidoreductases) catalyse the oxidative decarboxylation of malate to form pyruvate [], a reaction important in a number of metabolic pathways - e

Probab=96.14  E-value=0.014  Score=54.34  Aligned_cols=107  Identities=21%  Similarity=0.272  Sum_probs=71.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhC----CCC-----cEEEEEeCCC--cH------HHHHHHhcCCCCCeEEEEeCCCc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKIN----PLV-----SVLHLYDVVN--TP------GVTADISHMDTGAVVRGFLGQPQ  102 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~----~~~-----~el~L~D~~~--~~------~~~~dl~~~~~~~~v~~~~~t~d  102 (353)
                      +..||.+.|| |..|..++.+|...    |+-     ..++|+|.+.  ..      .....+.+...  ....   ..+
T Consensus        24 ~d~riv~~GA-GsAg~gia~ll~~~~~~~G~~~~eA~~~i~lvD~~Gll~~~r~~l~~~~~~~a~~~~--~~~~---~~~   97 (255)
T PF03949_consen   24 SDQRIVFFGA-GSAGIGIARLLVAAMVREGLSEEEARKRIWLVDSKGLLTDDREDLNPHKKPFARKTN--PEKD---WGS   97 (255)
T ss_dssp             GG-EEEEEB--SHHHHHHHHHHHHHHHCTTS-HHHHHTTEEEEETTEEEBTTTSSHSHHHHHHHBSSS--TTT-----SS
T ss_pred             HHcEEEEeCC-ChhHHHHHHHHHHHHHHhcCCHHHHhccEEEEeccceEeccCccCChhhhhhhccCc--cccc---ccC
Confidence            3469999999 99999999877655    773     7899999875  11      12223333221  1111   147


Q ss_pred             hhhhhCCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC--chhH
Q 018618          103 LENALTGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVP  166 (353)
Q Consensus       103 ~~~al~~A--DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~  166 (353)
                      +.++++++  |++|=+.+.+   |.           ..+++.+.|.+++++.+|+=.|||..  -.++
T Consensus        98 L~eav~~~kPtvLIG~S~~~---g~-----------ft~evv~~Ma~~~erPIIF~LSNPt~~aE~~p  151 (255)
T PF03949_consen   98 LLEAVKGAKPTVLIGLSGQG---GA-----------FTEEVVRAMAKHNERPIIFPLSNPTPKAECTP  151 (255)
T ss_dssp             HHHHHHCH--SEEEECSSST---TS-----------S-HHHHHHCHHHSSSEEEEE-SSSCGGSSS-H
T ss_pred             HHHHHHhcCCCEEEEecCCC---Cc-----------CCHHHHHHHhccCCCCEEEECCCCCCcccCCH
Confidence            89999999  9998876643   21           24688899999999999999999987  5554

g. carbon dioxide released from the reaction may be used in sugar production during the Calvin cycle of photosynthesis []. There are 3 forms of the enzyme []: an NAD-dependent form that decarboxylates oxaloacetate; an NAD-dependent form that does not decarboxylate oxalo-acetate; and an NADPH-dependent form []. Other proteins known to be similar to malic enzymes are the Escherichia coli scfA protein; an enzyme from Zea mays (Maize), formerly thought to be cinnamyl-alcohol dehydrogenase []; and the hypothetical Saccharomyces cerevisiae protein YKL029c. Studies on the duck liver malic enzyme reveals that it can be alkylated by bromopyruvate, resulting in the loss of oxidative decarboxylation and the subsequent enhancement of pyruvate reductase activity []. The alkylated form is able to bind NADPH but not L-malate, indicating impaired substrate-or divalent metal ion-binding in the active site []. Sequence analysis has highlighted a cysteine residue as the point of alkylation, suggesting that it may play an important role in the activity of the enzyme [], although it is absent in the sequences from some species. There are three well conserved regions in the enzyme sequences. Two of them seem to be involved in the binding NAD or NADP. The significance of the third one, located in the central part of the enzymes, is not yet known.; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2DVM_B 1WW8_A 3NV9_A 1PJ2_A 1PJL_B 1GZ3_A 1PJ4_A 1PJ3_C 1EFL_A 1EFK_B ....

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.14  E-value=0.072  Score=47.97  Aligned_cols=34  Identities=18%  Similarity=0.073  Sum_probs=31.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +++.|+||+|.+|+.++..|+..|.  +|+++|++.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~--~V~~~~r~~   35 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW--QVTATVRGP   35 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC--EEEEEeCCC
Confidence            4799999999999999999999887  999999876

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.14  E-value=0.031  Score=53.30  Aligned_cols=76  Identities=21%  Similarity=0.324  Sum_probs=57.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|||.+|.||..++..|...|.  +|.+++.+.                       .++++..+.||+||...|.+
T Consensus       159 Gk~V~vIG~s~ivG~PmA~~L~~~ga--tVtv~~~~t-----------------------~~l~e~~~~ADIVIsavg~~  213 (301)
T PRK14194        159 GKHAVVIGRSNIVGKPMAALLLQAHC--SVTVVHSRS-----------------------TDAKALCRQADIVVAAVGRP  213 (301)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCC--EEEEECCCC-----------------------CCHHHHHhcCCEEEEecCCh
Confidence            46999999966999999999998887  888887532                       24678889999999998765


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV  161 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv  161 (353)
                      ..-.   .++                 ..|+++||-++ |++
T Consensus       214 ~~v~---~~~-----------------ik~GaiVIDvgin~~  235 (301)
T PRK14194        214 RLID---ADW-----------------LKPGAVVIDVGINRI  235 (301)
T ss_pred             hccc---Hhh-----------------ccCCcEEEEeccccc
Confidence            3111   111                 34888988887 654

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.13  E-value=0.05  Score=45.82  Aligned_cols=33  Identities=24%  Similarity=0.508  Sum_probs=29.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||.|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv-~~i~ivD~d~   33 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGV-GKITLIDFDT   33 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC-CEEEEEcCCC
Confidence            6899999 9999999999999987 4899999874

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=96.11  E-value=0.015  Score=53.69  Aligned_cols=34  Identities=18%  Similarity=0.212  Sum_probs=30.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +++.|+||+|.+|..++..|++.|.  ++++.|.++
T Consensus        10 k~vlItG~s~gIG~~la~~l~~~G~--~v~~~~~~~   43 (266)
T PRK06171         10 KIIIVTGGSSGIGLAIVKELLANGA--NVVNADIHG   43 (266)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCc
Confidence            4789999999999999999999998  899999875

>PRK07201 short chain dehydrogenase; Provisional

Probab=96.10  E-value=0.16  Score=53.37  Aligned_cols=114  Identities=17%  Similarity=0.174  Sum_probs=65.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCC---chhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~---d~~~al~------  108 (353)
                      .+++.|+||+|.+|..++..|+..|.  +|++++.++  ......++....  ..+..+. .-+   +.+++++      
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGA--TVFLVARNGEALDELVAEIRAKG--GTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            45899999999999999999999987  899999876  222333333211  1222211 112   2223333      


Q ss_pred             -CCcEEEEcCCCCCCCC--------CCHHHHHHHHHHHHHHH----HHHHHhhCCCcEEEEecC
Q 018618          109 -GMDLVIIPAGVPRKPG--------MTRDDLFNINAGIVRTL----CEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~g--------~~r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tN  159 (353)
                       ..|++|..+|......        .+....+..|+.....+    .+.+++. ..+.++++|.
T Consensus       447 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~isS  509 (657)
T PRK07201        447 GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRER-RFGHVVNVSS  509 (657)
T ss_pred             CCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCEEEEECC
Confidence             6899999998642111        11223455666554444    4444433 3455666653

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.19  Score=45.98  Aligned_cols=114  Identities=11%  Similarity=0.107  Sum_probs=66.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  .|+++|.+.  ......++....  ..+..+. .-+|   .+++       +.
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGA--NVVITGRTKEKLEEAKLEIEQFP--GQVLTVQMDVRNPEDVQKMVEQIDEKFG   77 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999888  899999876  233333343221  1222211 1122   2221       24


Q ss_pred             CCcEEEEcCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRK-P--GMTR---DDLFNINAGIVRTLCEGIA----KCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-~--g~~r---~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN  159 (353)
                      ..|++|..+|.... +  ..+.   ...+..|+.....+.+.+.    +....+.++++|.
T Consensus        78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS  138 (252)
T PRK07677         78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVA  138 (252)
T ss_pred             CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcC
Confidence            67999999874321 1  2222   3345666655555555543    3333466776663

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=96.09  E-value=0.028  Score=53.21  Aligned_cols=69  Identities=26%  Similarity=0.330  Sum_probs=42.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHH-HHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~-~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .++|+|+|. |.+|..++..|...|+  .+..++.+...+. .....-..    +.-. ......++..+||+||++.
T Consensus         3 ~~~v~IvG~-GliG~s~a~~l~~~g~--~v~i~g~d~~~~~~~~a~~lgv----~d~~-~~~~~~~~~~~aD~Vivav   72 (279)
T COG0287           3 SMKVGIVGL-GLMGGSLARALKEAGL--VVRIIGRDRSAATLKAALELGV----IDEL-TVAGLAEAAAEADLVIVAV   72 (279)
T ss_pred             CcEEEEECC-chHHHHHHHHHHHcCC--eEEEEeecCcHHHHHHHhhcCc----cccc-ccchhhhhcccCCEEEEec
Confidence            469999998 9999999999999998  5555555442111 11111000    0000 0111246788999999984

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.08  E-value=0.099  Score=47.97  Aligned_cols=114  Identities=14%  Similarity=0.194  Sum_probs=63.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~ADi  112 (353)
                      .+++.|+||+|.+|..++..|++.|.  ++++.+.+.. ....++.+... ..+.. .....+.+++       +...|+
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~--~v~~~~~~~~-~~~~~l~~~~~-~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGA--KVAVLYNSAE-NEAKELREKGV-FTIKCDVGNRDQVKKSKEVVEKEFGRVDV   82 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCcH-HHHHHHHhCCC-eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35899999999999999999999987  7888765431 11222322111 01110 1011122222       236799


Q ss_pred             EEEcCCCCCC-C--CCCH---HHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          113 VIIPAGVPRK-P--GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~~-~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ||..+|.... +  ..+.   ...+..|+..    .+.+.+.+++. ..+.||++|.
T Consensus        83 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~g~iv~isS  138 (255)
T PRK06463         83 LVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLS-KNGAIVNIAS  138 (255)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcC
Confidence            9999886431 1  1222   2334556554    56666666543 3455666554

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.07  E-value=0.04  Score=51.73  Aligned_cols=68  Identities=19%  Similarity=0.327  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +|||+|||. |.+|..++..+...+ ...-+.++|.+...  +.++... ..  ...+   +|+++.+.++|+|++++
T Consensus         1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~--a~~~a~~-~~--~~~~---~~~~ell~~~DvVvi~a   69 (265)
T PRK13304          1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEK--AENLASK-TG--AKAC---LSIDELVEDVDLVVECA   69 (265)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHH--HHHHHHh-cC--CeeE---CCHHHHhcCCCEEEEcC
Confidence            479999998 999999998887754 22235678876521  2222221 11  1222   46667679999999986

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=96.05  E-value=0.12  Score=46.64  Aligned_cols=113  Identities=18%  Similarity=0.134  Sum_probs=63.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEeC-CCc---hhhh-------h
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLG-QPQ---LENA-------L  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~~-t~d---~~~a-------l  107 (353)
                      .++.|+|++|.+|++++..|.+.|.  .+++.|.+..   ......+...  ...+..+.. -+|   .+++       +
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~--~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGY--RVIATYFSGNDCAKDWFEEYGFT--EDQVRLKELDVTDTEECAEALAEIEEEE   78 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCcHHHHHHHHHHhhcc--CCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3789999999999999999998886  8999998742   1111111111  122322211 122   2222       2


Q ss_pred             CCCcEEEEcCCCCCC---CCCC---HHHHHHHHHHHHHHHH----HHHHhhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRK---PGMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~---~g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tN  159 (353)
                      ...|++|..+|....   ...+   ....+..|+.....+.    +.+++. +.+.++++|.
T Consensus        79 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~iss  139 (245)
T PRK12824         79 GPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQ-GYGRIINISS  139 (245)
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEECC
Confidence            358999999886421   1112   2234456666655554    444433 3456666664

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.05  E-value=0.056  Score=49.06  Aligned_cols=32  Identities=38%  Similarity=0.575  Sum_probs=29.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   76 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~   76 (353)
                      ||+|+|+ |.+|+.++..|+..|. .++.++|.+
T Consensus        30 ~V~ViG~-GglGs~ia~~La~~Gv-g~i~lvD~D   61 (212)
T PRK08644         30 KVGIAGA-GGLGSNIAVALARSGV-GNLKLVDFD   61 (212)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence            8999999 9999999999999987 489999987

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.05  E-value=0.042  Score=49.32  Aligned_cols=34  Identities=26%  Similarity=0.410  Sum_probs=30.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .||+|+|+ |.+|+.++..|+..|. .++.++|.+.
T Consensus        20 s~VlviG~-gglGsevak~L~~~GV-g~i~lvD~d~   53 (198)
T cd01485          20 AKVLIIGA-GALGAEIAKNLVLAGI-DSITIVDHRL   53 (198)
T ss_pred             CcEEEECC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence            49999999 7899999999999987 4899999763

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK08605 D-lactate dehydrogenase; Validated

Probab=96.03  E-value=0.029  Score=54.40  Aligned_cols=63  Identities=25%  Similarity=0.382  Sum_probs=45.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||. |.+|+.+|..|+. .|.  +|+.+|.......    ..     .+..   .+++++++++||+|++..
T Consensus       145 ~g~~VgIIG~-G~IG~~vA~~L~~~~g~--~V~~~d~~~~~~~----~~-----~~~~---~~~l~ell~~aDvIvl~l  208 (332)
T PRK08605        145 KDLKVAVIGT-GRIGLAVAKIFAKGYGS--DVVAYDPFPNAKA----AT-----YVDY---KDTIEEAVEGADIVTLHM  208 (332)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCC--EEEEECCCccHhH----Hh-----hccc---cCCHHHHHHhCCEEEEeC
Confidence            3569999999 9999999998843 344  8999997652211    11     0111   246788999999999985

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.02  E-value=0.36  Score=43.44  Aligned_cols=148  Identities=15%  Similarity=0.086  Sum_probs=79.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCc----hhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d----~~~al~~ADiVIi~  116 (353)
                      +++.|+||+|.+|.+++..|++.|.  +++++|++....    .     ...+..+.. -++    ..+.+...|+||..
T Consensus         6 k~~lVtGas~~iG~~ia~~l~~~G~--~v~~~~r~~~~~----~-----~~~~~~~~~D~~~~~~~~~~~~~~id~lv~~   74 (235)
T PRK06550          6 KTVLITGAASGIGLAQARAFLAQGA--QVYGVDKQDKPD----L-----SGNFHFLQLDLSDDLEPLFDWVPSVDILCNT   74 (235)
T ss_pred             CEEEEcCCCchHHHHHHHHHHHCCC--EEEEEeCCcccc----c-----CCcEEEEECChHHHHHHHHHhhCCCCEEEEC
Confidence            4799999999999999999999887  899999865210    0     011222110 011    12234678999999


Q ss_pred             CCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          117 AGVPR--KP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       117 ag~~~--~~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      +|...  .+  ..+.   ...+..|+.....+.+.+...   .+.+.+++++......            +.+..-.++.
T Consensus        75 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------~~~~~~~Y~~  142 (235)
T PRK06550         75 AGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFV------------AGGGGAAYTA  142 (235)
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc------------CCCCCcccHH
Confidence            88532  11  1222   234566766555555554432   2334555554322111            1222233454


Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +......+.+.+|+.++  +..+++.++
T Consensus       143 sK~a~~~~~~~la~~~~--~~gi~v~~v  168 (235)
T PRK06550        143 SKHALAGFTKQLALDYA--KDGIQVFGI  168 (235)
T ss_pred             HHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            43333345566777663  344544443

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.02  E-value=0.023  Score=47.01  Aligned_cols=72  Identities=24%  Similarity=0.308  Sum_probs=44.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHH-HHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~-~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|+|++|.+|+.++..+.+.+-..=+..+|.+.  ..|. .-++.... ...+..   ++|+++.++.+|+||-..
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~-~~~~~v---~~~l~~~~~~~DVvIDfT   75 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIG-PLGVPV---TDDLEELLEEADVVIDFT   75 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSS-T-SSBE---BS-HHHHTTH-SEEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcC-Cccccc---chhHHHhcccCCEEEEcC
Confidence            699999999999999999998854332245667654  1111 11222211 122332   367889999999988863

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK08223 hypothetical protein; Validated

Probab=96.01  E-value=0.03  Score=53.06  Aligned_cols=33  Identities=24%  Similarity=0.300  Sum_probs=30.3

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||.|+|+ |-+|+.++..|+..|+. +|.|+|-+.
T Consensus        29 ~VlIvG~-GGLGs~va~~LA~aGVG-~i~lvD~D~   61 (287)
T PRK08223         29 RVAIAGL-GGVGGIHLLTLARLGIG-KFTIADFDV   61 (287)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhCCC-eEEEEeCCC
Confidence            9999999 99999999999999974 899999874

>PRK06114 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.086  Score=48.41  Aligned_cols=113  Identities=19%  Similarity=0.246  Sum_probs=63.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  ++++.|.+.   ......++.+..  ..+..+. .-+|   .++++       
T Consensus         9 k~~lVtG~s~gIG~~ia~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~   84 (254)
T PRK06114          9 QVAFVTGAGSGIGQRIAIGLAQAGA--DVALFDLRTDDGLAETAEHIEAAG--RRAIQIAADVTSKADLRAAVARTEAEL   84 (254)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999987  899999865   222333344321  1221111 1112   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tN  159 (353)
                      ..-|++|..+|......   .+   ....+..|+.....+.+    .+.+. ..+.++++|.
T Consensus        85 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS  145 (254)
T PRK06114         85 GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIAS  145 (254)
T ss_pred             CCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECc
Confidence            34599999998643211   12   22334556555544444    34322 3355665543

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.00  E-value=0.041  Score=52.51  Aligned_cols=69  Identities=17%  Similarity=0.150  Sum_probs=48.7

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .....||+|+|+ |.+|..++..|...|.  +|..+|++. ....+.   ...  ....   ...++.+.++++|+||.+
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga--~V~v~~r~~~~~~~~~---~~G--~~~~---~~~~l~~~l~~aDiVI~t  217 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGA--NVTVGARKSAHLARIT---EMG--LSPF---HLSELAEEVGKIDIIFNT  217 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHH---HcC--Ceee---cHHHHHHHhCCCCEEEEC
Confidence            335679999999 9999999999998886  999999875 222222   111  1111   113566788999999998


Q ss_pred             C
Q 018618          117 A  117 (353)
Q Consensus       117 a  117 (353)
                      .
T Consensus       218 ~  218 (296)
T PRK08306        218 I  218 (296)
T ss_pred             C
Confidence            5

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.00  E-value=0.027  Score=53.59  Aligned_cols=96  Identities=20%  Similarity=0.216  Sum_probs=60.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      ..+|+|+|+ |.+|..++..|...|.  +|.++|++..+.  ..+....  .  ..+ ...++.+.++++|+||.+....
T Consensus       151 gk~v~IiG~-G~iG~avA~~L~~~G~--~V~v~~R~~~~~--~~~~~~g--~--~~~-~~~~l~~~l~~aDiVint~P~~  220 (287)
T TIGR02853       151 GSNVMVLGF-GRTGMTIARTFSALGA--RVFVGARSSADL--ARITEMG--L--IPF-PLNKLEEKVAEIDIVINTIPAL  220 (287)
T ss_pred             CCEEEEEcC-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHCC--C--eee-cHHHHHHHhccCCEEEECCChH
Confidence            459999999 9999999999998886  899999875211  1111111  1  111 1135667889999999985211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCch
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNST  164 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~  164 (353)
                               ++  +    .+   .+....|++++|.++ +|-.+-
T Consensus       221 ---------ii--~----~~---~l~~~k~~aliIDlas~Pg~td  247 (287)
T TIGR02853       221 ---------VL--T----AD---VLSKLPKHAVIIDLASKPGGTD  247 (287)
T ss_pred             ---------Hh--C----HH---HHhcCCCCeEEEEeCcCCCCCC
Confidence                     11  1    11   223334678888775 886643

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.98  E-value=0.065  Score=48.38  Aligned_cols=34  Identities=24%  Similarity=0.304  Sum_probs=31.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+|.|+||+|.+|+.++..|++.|.  +|++++.++
T Consensus         6 ~~vlItGa~g~iG~~~a~~l~~~G~--~V~~~~r~~   39 (238)
T PRK05786          6 KKVAIIGVSEGLGYAVAYFALKEGA--QVCINSRNE   39 (238)
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            4899999999999999999999888  999999876

>PRK07775 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.27  Score=45.79  Aligned_cols=100  Identities=15%  Similarity=0.149  Sum_probs=57.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a-------l~  108 (353)
                      +.+.|+||+|.+|.+++..|+..|.  +|++++.+.  ......++...  ...+..+. .-+|.+   ++       +.
T Consensus        11 ~~vlVtGa~g~iG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775         11 RPALVAGASSGIGAATAIELAAAGF--PVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3799999999999999999999987  888888765  22122222221  12222211 112322   11       23


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI  145 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i  145 (353)
                      ..|+||..+|.....   ..+   ....+..|+.....+.+.+
T Consensus        87 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  129 (274)
T PRK07775         87 EIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAV  129 (274)
T ss_pred             CCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence            679999998864211   111   2233456666555555544

>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]

Probab=95.95  E-value=0.031  Score=53.22  Aligned_cols=77  Identities=22%  Similarity=0.371  Sum_probs=48.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHH-----------HHH-hcCCCCCeEEEEeCCCchhhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVT-----------ADI-SHMDTGAVVRGFLGQPQLENA  106 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~-----------~dl-~~~~~~~~v~~~~~t~d~~~a  106 (353)
                      ++||+-||| |+||.....-++..=.-.++.++|++..+  +.-           .|. .++. +..+ ++  ++|.+.+
T Consensus         1 ~~kicciga-gyvggptcavia~kcp~i~vtvvd~s~~ri~~wnsd~lpiyepgldevv~~cr-gknl-ff--stdieka   75 (481)
T KOG2666|consen    1 MVKICCIGA-GYVGGPTCAVIALKCPDIEVTVVDISVPRINAWNSDKLPIYEPGLDEVVKQCR-GKNL-FF--STDIEKA   75 (481)
T ss_pred             CceEEEecC-cccCCcchheeeecCCceEEEEEecCchHhhcccCCCCcccCCCHHHHHHHhc-CCce-ee--ecchHHH
Confidence            369999999 99987766544443222399999997611  100           111 1111 1222 23  4789999


Q ss_pred             hCCCcEEEEcCCCCCC
Q 018618          107 LTGMDLVIIPAGVPRK  122 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~  122 (353)
                      ++.||+|++....|.+
T Consensus        76 i~eadlvfisvntptk   91 (481)
T KOG2666|consen   76 IKEADLVFISVNTPTK   91 (481)
T ss_pred             hhhcceEEEEecCCcc
Confidence            9999999998766643

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.94  E-value=0.19  Score=45.55  Aligned_cols=114  Identities=14%  Similarity=0.091  Sum_probs=61.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CC--cHHHHHHHhcCCCCCeEEEE-eCCCc---hhhh-------h
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENA-------L  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~--~~~~~~dl~~~~~~~~v~~~-~~t~d---~~~a-------l  107 (353)
                      +.+.|+||+|.+|..++..|++.|.  ++++... +.  ......++....  ..+..+ ..-+|   .+++       +
T Consensus         4 k~~lVtG~s~giG~~~a~~l~~~G~--~vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   79 (246)
T PRK12938          4 RIAYVTGGMGGIGTSICQRLHKDGF--KVVAGCGPNSPRRVKWLEDQKALG--FDFIASEGNVGDWDSTKAAFDKVKAEV   79 (246)
T ss_pred             CEEEEECCCChHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4689999999999999999999987  7777543 22  111222332211  112111 11122   2222       2


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ...|+||.++|.....   ..+   ....+..|......+.+.+...   .+.+.++++|.
T Consensus        80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS  140 (246)
T PRK12938         80 GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISS  140 (246)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEec
Confidence            4689999999865321   112   2334566766544444443322   23345666554

>PLN02928 oxidoreductase family protein

Probab=95.94  E-value=0.03  Score=54.65  Aligned_cols=102  Identities=24%  Similarity=0.189  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHH--hcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADI--SHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl--~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .++|+|+|. |.+|+.+|..+..-|.  +|+.+|+.........+  ................++++.++.||+|++...
T Consensus       159 gktvGIiG~-G~IG~~vA~~l~afG~--~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP  235 (347)
T PLN02928        159 GKTVFILGY-GAIGIELAKRLRPFGV--KLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT  235 (347)
T ss_pred             CCEEEEECC-CHHHHHHHHHHhhCCC--EEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence            469999999 9999999999987776  99999986311111111  000000000000012468899999999999752


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..  +         .+-.++.  .+.+...-|++++|+++
T Consensus       236 lt--~---------~T~~li~--~~~l~~Mk~ga~lINva  262 (347)
T PLN02928        236 LT--K---------ETAGIVN--DEFLSSMKKGALLVNIA  262 (347)
T ss_pred             CC--h---------HhhcccC--HHHHhcCCCCeEEEECC
Confidence            11  1         1111121  23444445789999987

>PLN02503 fatty acyl-CoA reductase 2

Probab=95.94  E-value=0.098  Score=54.79  Aligned_cols=109  Identities=17%  Similarity=0.077  Sum_probs=68.7

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCC--c--HHHH-HHHhc-----------CC-----CCCeEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVN--T--PGVT-ADISH-----------MD-----TGAVVRGF   97 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~--~--~~~~-~dl~~-----------~~-----~~~~v~~~   97 (353)
                      +.++|.|+||+|++|..++..|+..+ -..+|.++.+..  .  .... .++.+           ..     ...++..+
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            46799999999999999999888654 356788887643  1  1111 11111           00     01233332


Q ss_pred             eCC----------CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618           98 LGQ----------PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus        98 ~~t----------~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      .+.          .+++...++.|+||++|+... ...+.......|+....++++.+.+..
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~-f~~~~~~a~~vNV~GT~nLLelA~~~~  258 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTT-FDERYDVAIDINTRGPCHLMSFAKKCK  258 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccc-cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence            211          123334477999999987543 234456677889999999999887653

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=95.94  E-value=0.071  Score=51.19  Aligned_cols=66  Identities=15%  Similarity=0.186  Sum_probs=45.2

Q ss_pred             CeEEEEcCCCC--------------------cHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEe
Q 018618           42 FKVAILGAAGG--------------------IGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL   98 (353)
Q Consensus        42 ~KI~IiGa~G~--------------------vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~   98 (353)
                      |||+|-|| |+                    -|+.+|..|+..|+  +|+++|++..   ......+.+..    ...  
T Consensus         1 ~~~~~~g~-gnq~ly~~~~~~~~~~gg~~p~gGspMArnLlkAGh--eV~V~Drnrsa~e~e~~e~LaeaG----A~~--   71 (341)
T TIGR01724         1 MKVSVYGA-GNQKLYTDELNLPEKFGGEPPYGGSRMAIEFAMAGH--DVVLAEPNREFMSDDLWKKVEDAG----VKV--   71 (341)
T ss_pred             CeeEEecC-cchhHHHHHhCChhhcCCCCCCCHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhHHHHHCC----Cee--
Confidence            67888887 64                    37888888888898  9999998752   22233344332    111  


Q ss_pred             CCCchhhhhCCCcEEEEcC
Q 018618           99 GQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        99 ~t~d~~~al~~ADiVIi~a  117 (353)
                       .++..++.++||+||+..
T Consensus        72 -AaS~aEAAa~ADVVIL~L   89 (341)
T TIGR01724        72 -VSDDKEAAKHGEIHVLFT   89 (341)
T ss_pred             -cCCHHHHHhCCCEEEEec
Confidence             234578999999999983

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.24  Score=45.56  Aligned_cols=115  Identities=15%  Similarity=0.163  Sum_probs=64.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh----------hhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~----------~al~  108 (353)
                      +.+.|+||+|.+|..++..|+..|.  +|++++++.  ......++........+..+. .-+|.+          +.+.
T Consensus         9 k~~lItGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          9 RVAVVTGGSSGIGLATVELLLEAGA--SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999988  899999876  233333343221112222211 112321          1234


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHH----HHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNIN----AGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ..|++|..+|.....   ..+.   ...+..|    ....+.+.+.+++. ..+.|+++|.
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS  146 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNS  146 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEecc
Confidence            679999999864211   1122   2223334    33455555555543 2356666554

>PRK05872 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.16  Score=48.11  Aligned_cols=114  Identities=22%  Similarity=0.250  Sum_probs=66.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCch---hh-------hh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL---EN-------AL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~---~~-------al  107 (353)
                      .+++.|+||+|.+|..++..|+..|.  +|++++++.  +...+.++..   ...+..+ ..-+|.   ++       .+
T Consensus         9 gk~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (296)
T PRK05872          9 GKVVVVTGAARGIGAELARRLHARGA--KLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVERF   83 (296)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            34899999999999999999999997  899999876  2223333322   1111110 111222   11       23


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  159 (353)
                      ...|+||..+|.....   ..+   ....+..|+.....+++.+..+-  ..+.++++|.
T Consensus        84 g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS  143 (296)
T PRK05872         84 GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSS  143 (296)
T ss_pred             CCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence            5679999999864211   112   22345567665555555544321  2455666553

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.90  E-value=0.068  Score=48.56  Aligned_cols=35  Identities=26%  Similarity=0.371  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ..++.|+|++|.+|..++..|+..|.  .++++|.+.
T Consensus         5 ~~~~lItG~~g~iG~~~a~~l~~~G~--~vi~~~r~~   39 (253)
T PRK08217          5 DKVIVITGGAQGLGRAMAEYLAQKGA--KLALIDLNQ   39 (253)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            34899999999999999999998887  899999876

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=95.90  E-value=0.051  Score=51.20  Aligned_cols=70  Identities=24%  Similarity=0.205  Sum_probs=45.4

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhC--CCCcEEE-EEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKIN--PLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~--~~~~el~-L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      .+++||+|||. |.+|..++..|...  +.  +|+ ++|.+..+  +.++....  .....   .+++++.+.++|+|++
T Consensus         4 m~~irIGIIG~-G~IG~~~a~~L~~~~~~~--el~aV~dr~~~~--a~~~a~~~--g~~~~---~~~~eell~~~D~Vvi   73 (271)
T PRK13302          4 RPELRVAIAGL-GAIGKAIAQALDRGLPGL--TLSAVAVRDPQR--HADFIWGL--RRPPP---VVPLDQLATHADIVVE   73 (271)
T ss_pred             CCeeEEEEECc-cHHHHHHHHHHHhcCCCe--EEEEEECCCHHH--HHHHHHhc--CCCcc---cCCHHHHhcCCCEEEE
Confidence            34579999999 99999999888764  33  655 77876522  22222110  00111   1456777899999999


Q ss_pred             cCC
Q 018618          116 PAG  118 (353)
Q Consensus       116 ~ag  118 (353)
                      ++.
T Consensus        74 ~tp   76 (271)
T PRK13302         74 AAP   76 (271)
T ss_pred             CCC
Confidence            864

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.89  E-value=0.1  Score=46.96  Aligned_cols=70  Identities=14%  Similarity=0.099  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .+||.|||+ |.+|...+..|...|.  +|++++.+.... ..++.+..   .+.......+ ++.+.++|+||.+.+
T Consensus        10 ~k~vLVIGg-G~va~~ka~~Ll~~ga--~V~VIs~~~~~~-l~~l~~~~---~i~~~~~~~~-~~~l~~adlViaaT~   79 (202)
T PRK06718         10 NKRVVIVGG-GKVAGRRAITLLKYGA--HIVVISPELTEN-LVKLVEEG---KIRWKQKEFE-PSDIVDAFLVIAATN   79 (202)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEcCCCCHH-HHHHHhCC---CEEEEecCCC-hhhcCCceEEEEcCC
Confidence            359999999 9999999999988886  899998643222 22333221   1222111122 356899999988754

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.88  E-value=0.11  Score=48.77  Aligned_cols=34  Identities=21%  Similarity=0.416  Sum_probs=30.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+|+|+|+ |.||+.++..|+..|. .+|.|+|.+.
T Consensus        31 s~VlVvG~-GGVGs~vae~Lar~GV-g~itLiD~D~   64 (268)
T PRK15116         31 AHICVVGI-GGVGSWAAEALARTGI-GAITLIDMDD   64 (268)
T ss_pred             CCEEEECc-CHHHHHHHHHHHHcCC-CEEEEEeCCE
Confidence            38999999 9999999999999986 3899999764

>PRK07578 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.062  Score=47.43  Aligned_cols=101  Identities=20%  Similarity=0.203  Sum_probs=58.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhh---hhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLEN---ALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~---al~~ADiVIi~ag  118 (353)
                      |++.|+||+|.+|..++..|.+. .  +|++++++.. ....|+.+.            .+.++   .+...|++|..+|
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~--~vi~~~r~~~-~~~~D~~~~------------~~~~~~~~~~~~id~lv~~ag   64 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-H--EVITAGRSSG-DVQVDITDP------------ASIRALFEKVGKVDAVVSAAG   64 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-C--cEEEEecCCC-ceEecCCCh------------HHHHHHHHhcCCCCEEEECCC
Confidence            58999999999999999999877 4  8899887541 011122211            11112   2346899999988


Q ss_pred             CCCC-C--CCCHHH---HHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618          119 VPRK-P--GMTRDD---LFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       119 ~~~~-~--g~~r~~---~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                      .... +  ..+..+   .+..|+.....+.+....+- +.+.++++|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is  111 (199)
T PRK07578         65 KVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTS  111 (199)
T ss_pred             CCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEc
Confidence            5421 1  123222   34456555555555444332 345555554

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.84  E-value=0.19  Score=47.77  Aligned_cols=100  Identities=25%  Similarity=0.347  Sum_probs=58.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhh------h
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG-QPQ---LENA------L  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~a------l  107 (353)
                      .+++.|+||+|.+|..++..|+..|.  ++++.|...   ....+.++...  ...+..+.. -+|   .++.      +
T Consensus        12 ~k~~lVTGas~gIG~~ia~~L~~~Ga--~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~~~~~   87 (306)
T PRK07792         12 GKVAVVTGAAAGLGRAEALGLARLGA--TVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVATAVGL   87 (306)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999999987  899999754   22233334322  122222211 122   1121      2


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH
Q 018618          108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG  144 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~  144 (353)
                      ...|++|..+|.....   .++.   ...+..|+.....+.+.
T Consensus        88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~  130 (306)
T PRK07792         88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRN  130 (306)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence            4689999999875432   1222   23455665554444443

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=95.84  E-value=0.28  Score=44.22  Aligned_cols=113  Identities=17%  Similarity=0.195  Sum_probs=61.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      .+.|+||+|.+|..++..|+..|.  +++++.. +.  ......++....  ..+..+. .-+|.          .+.+.
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (242)
T TIGR01829         2 IALVTGGMGGIGTAICQRLAKDGY--RVAANCGPNEERAEAWLQEQGALG--FDFRVVEGDVSSFESCKAAVAKVEAELG   77 (242)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhhC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999887  7888776 32  111112222111  1222111 11221          12234


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHHhhCCCcEEEEecCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISNP  160 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNP  160 (353)
                      ..|+||..+|.....   ..+   ....+..|......+.    +.+++. +.+.+++++..
T Consensus        78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~iss~  138 (242)
T TIGR01829        78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRER-GWGRIINISSV  138 (242)
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEcch
Confidence            689999998864311   112   2334566766544443    444333 33456666543

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.088  Score=47.40  Aligned_cols=34  Identities=21%  Similarity=0.134  Sum_probs=31.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ++|.|+||+|.+|..++..|++.|.  ++++++++.
T Consensus         4 k~vlItG~s~~iG~~ia~~l~~~G~--~v~~~~r~~   37 (234)
T PRK07577          4 RTVLVTGATKGIGLALSLRLANLGH--QVIGIARSA   37 (234)
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCC--EEEEEeCCc
Confidence            5899999999999999999999887  899999865

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.82  E-value=0.21  Score=46.55  Aligned_cols=157  Identities=13%  Similarity=0.177  Sum_probs=80.5

Q ss_pred             CeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCe-EEE-EeCCCchhh-------hhCC
Q 018618           42 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAV-VRG-FLGQPQLEN-------ALTG  109 (353)
Q Consensus        42 ~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~-v~~-~~~t~d~~~-------al~~  109 (353)
                      +.+.|+||++  -+|..++..|++.|.  .|++.|.+. ....+.++........ +.. .+...+.++       .+..
T Consensus         7 k~~lITGas~~~GIG~aia~~la~~G~--~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          7 KRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHHCCC--EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            4788999953  699999999999997  889988764 2233334432211011 110 000111221       1235


Q ss_pred             CcEEEEcCCCCCCC--------CCCHH---HHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          110 MDLVIIPAGVPRKP--------GMTRD---DLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       110 ADiVIi~ag~~~~~--------g~~r~---~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .|++|..+|.....        ..+..   ..+..|+.....+.+.+... .+++.|+++|.-....            .
T Consensus        85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~------------~  152 (262)
T PRK07984         85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER------------A  152 (262)
T ss_pred             CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCC------------C
Confidence            79999999853211        12222   23344654433333333222 2356777766432111            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .|..-.++.+......+-+.+|..++  +..|++..+
T Consensus       153 ~~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~i  187 (262)
T PRK07984        153 IPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAI  187 (262)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHhc--ccCcEEeee
Confidence            22223455554445567777877763  445554444

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.81  E-value=0.32  Score=46.06  Aligned_cols=119  Identities=17%  Similarity=0.221  Sum_probs=77.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE----eCCCchh-------hhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF----LGQPQLE-------NALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~----~~t~d~~-------~al~  108 (353)
                      +.|.|+||++-+|.++|+.++..|.  .++++-...  ++-...++.......++...    +..++.+       ..+.
T Consensus        13 kvVvITGASsGIG~~lA~~la~~G~--~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg   90 (282)
T KOG1205|consen   13 KVVLITGASSGIGEALAYELAKRGA--KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG   90 (282)
T ss_pred             CEEEEeCCCcHHHHHHHHHHHhCCC--ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence            4788999999999999999999998  778888765  33333555443221111111    1112222       3468


Q ss_pred             CCcEEEEcCCCCCCCCC----C---HHHHHHH----HHHHHHHHHHHHHhhCCCcEEEEecCCCCch
Q 018618          109 GMDLVIIPAGVPRKPGM----T---RDDLFNI----NAGIVRTLCEGIAKCCPNATVNLISNPVNST  164 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~----~---r~~~~~~----N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~  164 (353)
                      +.|+.|..||..+ .+.    +   ....+.-    .+-..+...+.+++.. ++.|++++...+.+
T Consensus        91 ~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~  155 (282)
T KOG1205|consen   91 RVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKM  155 (282)
T ss_pred             CCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEecccccc
Confidence            9999999999877 331    1   1223333    4677888888888877 78888877766544

>PRK06484 short chain dehydrogenase; Validated

Probab=95.81  E-value=0.047  Score=55.76  Aligned_cols=156  Identities=17%  Similarity=0.224  Sum_probs=85.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEE-EeCCCchhhhh-------CCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRG-FLGQPQLENAL-------TGM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al-------~~A  110 (353)
                      .+++.|+||+|.+|..++..|+..|.  +|+++|++.  .+....++.. .. ..+.. .....+.++.+       ..-
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGD--RLLIIDRDAEGAKKLAEALGD-EH-LSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCC-ce-eEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999997  899999875  2222222211 10 01111 11111222222       357


Q ss_pred             cEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618          111 DLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  182 (353)
Q Consensus       111 DiVIi~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k  182 (353)
                      |++|..+|...  .+  ..+   ....+..|+.....+.+.+..+ ...+.|+++|......            +.|..-
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~  412 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLL------------ALPPRN  412 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcC------------CCCCCc
Confidence            99999998642  11  122   2344566766655555554433 2346777776543221            233333


Q ss_pred             eEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          183 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       183 viG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .++.+......+-+.+++.+.  +..|++..+
T Consensus       413 ~Y~asKaal~~l~~~la~e~~--~~gI~vn~v  442 (520)
T PRK06484        413 AYCASKAAVTMLSRSLACEWA--PAGIRVNTV  442 (520)
T ss_pred             hhHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence            455544444456667777663  344444333

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.81  E-value=0.13  Score=51.68  Aligned_cols=117  Identities=20%  Similarity=0.249  Sum_probs=68.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~ADi  112 (353)
                      ..++.|+||+|.+|..++..|+..|.  +++++|.........++........+.. .....+.+..       +...|+
T Consensus       210 g~~vlItGasggIG~~la~~l~~~Ga--~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        210 GKVALVTGAARGIGAAIAEVLARDGA--HVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            35899999999999999999999887  8999998542222222221110011111 1011111111       236899


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          113 VIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ||+++|.....   .++   ....+..|+.....+.+.+...   .+.+.++++|.
T Consensus       288 vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS  343 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS  343 (450)
T ss_pred             EEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence            99999865321   122   2344567877777777777652   24466776664

>PLN02712 arogenate dehydrogenase

Probab=95.80  E-value=0.063  Score=56.96  Aligned_cols=66  Identities=21%  Similarity=0.328  Sum_probs=46.1

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC-CCcEEEEcC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPA  117 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~-~ADiVIi~a  117 (353)
                      ..++||+|||. |.+|..++..|...|.  +|+.+|.+.....+.+   .  +  +...   +++++.+. ++|+||++.
T Consensus       367 ~~~~kIgIIGl-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~a~~---~--G--v~~~---~~~~el~~~~aDvVILav  433 (667)
T PLN02712        367 GSKLKIAIVGF-GNFGQFLAKTMVKQGH--TVLAYSRSDYSDEAQK---L--G--VSYF---SDADDLCEEHPEVILLCT  433 (667)
T ss_pred             CCCCEEEEEec-CHHHHHHHHHHHHCcC--EEEEEECChHHHHHHH---c--C--CeEe---CCHHHHHhcCCCEEEECC
Confidence            35689999998 9999999999988886  8999998752111111   1  1  1221   35556565 599999984

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=95.80  E-value=0.06  Score=51.87  Aligned_cols=65  Identities=20%  Similarity=0.198  Sum_probs=43.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+||+|||+ |++|.+++..|...|+  ++++.+....... ..+....    +..    .+..+++++||+|+++.
T Consensus         3 ~kkIgiIG~-G~mG~AiA~~L~~sG~--~Viv~~~~~~~~~-~~a~~~G----v~~----~s~~ea~~~ADiVvLaV   67 (314)
T TIGR00465         3 GKTVAIIGY-GSQGHAQALNLRDSGL--NVIVGLRKGGASW-KKATEDG----FKV----GTVEEAIPQADLIMNLL   67 (314)
T ss_pred             cCEEEEEeE-cHHHHHHHHHHHHCCC--eEEEEECcChhhH-HHHHHCC----CEE----CCHHHHHhcCCEEEEeC
Confidence            468999999 9999999999999887  6666554431111 1111111    121    13567889999999985

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.77  E-value=0.08  Score=47.45  Aligned_cols=34  Identities=18%  Similarity=0.398  Sum_probs=30.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .||+|+|+ |.+|+.++..|+..|. .+|+++|.+.
T Consensus        22 s~VlIiG~-gglG~evak~La~~GV-g~i~lvD~d~   55 (197)
T cd01492          22 ARILLIGL-KGLGAEIAKNLVLSGI-GSLTILDDRT   55 (197)
T ss_pred             CcEEEEcC-CHHHHHHHHHHHHcCC-CEEEEEECCc
Confidence            49999999 8899999999999997 4899999764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd00762 NAD_bind_malic_enz NAD(P) binding domain of malic enzyme

Probab=95.77  E-value=0.037  Score=51.45  Aligned_cols=121  Identities=18%  Similarity=0.199  Sum_probs=78.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC----C-----CcEEEEEeCCC--cHH------HHHHHhcCCCCCeEEEEeCCCch
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP----L-----VSVLHLYDVVN--TPG------VTADISHMDTGAVVRGFLGQPQL  103 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~----~-----~~el~L~D~~~--~~~------~~~dl~~~~~~~~v~~~~~t~d~  103 (353)
                      ..||.+.|| |..|..++.+|...+    +     .+.++++|...  ..+      ....+.+..  ..-.   ...++
T Consensus        25 d~riv~~GA-GsAg~gia~ll~~~~~~~Gls~e~A~~~i~~vD~~Gll~~~r~~l~~~~~~~~~~~--~~~~---~~~~L   98 (254)
T cd00762          25 EHKVLFNGA-GAAALGIANLIVXLXVKEGISKEEACKRIWXVDRKGLLVKNRKETCPNEYHLARFA--NPER---ESGDL   98 (254)
T ss_pred             hcEEEEECc-CHHHHHHHHHHHHHHHhcCCCHHHHhccEEEECCCCeEeCCCCccCHHHHHHHHHc--Cccc---ccCCH
Confidence            469999999 999999998776543    2     14899999875  111      111111010  0111   12578


Q ss_pred             hhhhC--CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC--chhHHHHHHHHHhCCCC
Q 018618          104 ENALT--GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN--STVPIAAEVFKKAGTYD  179 (353)
Q Consensus       104 ~~al~--~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~--~~t~~~~~~~~~~~~~~  179 (353)
                      .++++  ++|++|=+.+.+   |.           +.+++.+.|.+++++.+|+-.|||..  -.++   +-.++.+  +
T Consensus        99 ~eav~~~kptvlIG~S~~~---g~-----------ft~evv~~Ma~~~~~PIIFaLSNPt~~aE~tp---e~a~~~t--~  159 (254)
T cd00762          99 EDAVEAAKPDFLIGVSRVG---GA-----------FTPEVIRAXAEINERPVIFALSNPTSKAECTA---EEAYTAT--E  159 (254)
T ss_pred             HHHHHhhCCCEEEEeCCCC---CC-----------CCHHHHHHHhhcCCCCEEEECCCcCCccccCH---HHHHhhc--C
Confidence            99999  999998876544   21           24578889999999999999999986  4443   2223432  1


Q ss_pred             CCceEee
Q 018618          180 PKKLLGV  186 (353)
Q Consensus       180 ~~kviG~  186 (353)
                      -+.+|+.
T Consensus       160 G~ai~At  166 (254)
T cd00762         160 GRAIFAS  166 (254)
T ss_pred             CCEEEEE
Confidence            2467777

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glut

>PRK08291 ectoine utilization protein EutC; Validated

Probab=95.74  E-value=0.058  Score=52.25  Aligned_cols=73  Identities=15%  Similarity=0.240  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .++|+|+|+ |..|...+..+....-+.+|.++|++.  ++..+.++.+.. ...+..   ..|+++++.+||+||.+..
T Consensus       132 ~~~v~IiGa-G~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~-g~~v~~---~~d~~~al~~aDiVi~aT~  206 (330)
T PRK08291        132 ASRAAVIGA-GEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAEL-GIPVTV---ARDVHEAVAGADIIVTTTP  206 (330)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhcc-CceEEE---eCCHHHHHccCCEEEEeeC
Confidence            358999999 888888777776533356999999876  333444444321 223333   2578899999999988753

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.74  E-value=0.0082  Score=59.21  Aligned_cols=71  Identities=25%  Similarity=0.312  Sum_probs=44.2

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEE--EeC--CCchhhhhCCCcEEEEcC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRG--FLG--QPQLENALTGMDLVIIPA  117 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~--~~~--t~d~~~al~~ADiVIi~a  117 (353)
                      |.|+|+ |.+|+.++..|++.+...++++.|++..+  ..+..+   . ...+..  ...  ..++++.++++|+||.++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---~-~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~   75 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---L-GDRVEAVQVDVNDPESLAELLRGCDVVINCA   75 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----T-TTTEEEEE--TTTHHHHHHHHTTSSEEEE-S
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---c-ccceeEEEEecCCHHHHHHHHhcCCEEEECC
Confidence            789999 99999999999988765599999997622  222222   1 122222  111  123557889999999998


Q ss_pred             CC
Q 018618          118 GV  119 (353)
Q Consensus       118 g~  119 (353)
                      |.
T Consensus        76 gp   77 (386)
T PF03435_consen   76 GP   77 (386)
T ss_dssp             SG
T ss_pred             cc
Confidence            64

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.17  Score=45.36  Aligned_cols=113  Identities=17%  Similarity=0.169  Sum_probs=64.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh---hC--CCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA---LT--GMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a---l~--~ADiVIi  115 (353)
                      +++.|+||+|.+|++++..|+..|.  +|+++|.+....  .++..... ..+.. .....++++.   +.  ..|+||.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~--~v~~~~r~~~~~--~~~~~~~~-~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW--RVIATARDAAAL--AALQALGA-EALALDVADPASVAGLAWKLDGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC--EEEEEECCHHHH--HHHHhccc-eEEEecCCCHHHHHHHHHHhcCCCCCEEEE
Confidence            4789999999999999999988887  899999875211  12222111 01111 1111222221   22  4799999


Q ss_pred             cCCCCC--C-C--CCCH---HHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618          116 PAGVPR--K-P--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  159 (353)
Q Consensus       116 ~ag~~~--~-~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  159 (353)
                      ++|...  . +  ..+.   ...+..|+.....+.+.+..+-  ..+.+++++.
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS  130 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSS  130 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcC
Confidence            988642  1 1  1122   3346677777667766665432  2344555543

>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type

Probab=95.71  E-value=0.051  Score=52.58  Aligned_cols=71  Identities=15%  Similarity=0.145  Sum_probs=49.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..+++|||+ |.+|...+..+.......+|.++|++.  ++..+.++.+.  ...+...   .+.++++++||+|+.+.
T Consensus       128 ~~~lgiiG~-G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~--g~~v~~~---~~~~eav~~aDiVitaT  200 (325)
T TIGR02371       128 SSVLGIIGA-GRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDY--EVPVRAA---TDPREAVEGCDILVTTT  200 (325)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhh--CCcEEEe---CCHHHHhccCCEEEEec
Confidence            358999999 999998666655544467999999987  33344444432  2233432   46789999999999864

This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.

>PRK05599 hypothetical protein; Provisional

Probab=95.70  E-value=0.57  Score=42.89  Aligned_cols=146  Identities=13%  Similarity=0.155  Sum_probs=78.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---h-------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~-------~~al~  108 (353)
                      |.+.|+||++.+|..++..|++ |.  .|++.++++  ++..+.++..... ..+..+. .-+|   .       .+.+.
T Consensus         1 ~~vlItGas~GIG~aia~~l~~-g~--~Vil~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   76 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLCH-GE--DVVLAARRPEAAQGLASDLRQRGA-TSVHVLSFDAQDLDTHRELVKQTQELAG   76 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHhC-CC--EEEEEeCCHHHHHHHHHHHHhccC-CceEEEEcccCCHHHHHHHHHHHHHhcC
Confidence            4588999999999999999884 65  899999876  3444445543211 1111110 0011   1       12234


Q ss_pred             CCcEEEEcCCCCCCCC---CCH---HHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      .-|++|+.+|......   .+.   .+....|.    ...+.+.+.+.+...++.|+++|.-....            +.
T Consensus        77 ~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------~~  144 (246)
T PRK05599         77 EISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWR------------AR  144 (246)
T ss_pred             CCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccccc------------CC
Confidence            6899999988642211   111   12223332    33345556665444456777776543322            11


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhC
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      |..-.++.+.-....+-+.+++.++
T Consensus       145 ~~~~~Y~asKaa~~~~~~~la~el~  169 (246)
T PRK05599        145 RANYVYGSTKAGLDAFCQGLADSLH  169 (246)
T ss_pred             cCCcchhhHHHHHHHHHHHHHHHhc
Confidence            2223455554444456677777763

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=95.65  E-value=0.035  Score=54.42  Aligned_cols=71  Identities=15%  Similarity=0.166  Sum_probs=46.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHH-hCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMK-INPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~-~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +||+|+||+|.||+.+...|. +.++ ..+++++......+.......    ..+... ..++ .+++.+.|+|++++|
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~----~~~~v~-~~~~-~~~~~~vDivffa~g   73 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGG----TTGTLQ-DAFD-IDALKALDIIITCQG   73 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCC----CcceEE-cCcc-cccccCCCEEEEcCC
Confidence            489999999999999999888 5555 378899987553222221111    122221 1122 246899999999875

>PRK06484 short chain dehydrogenase; Validated

Probab=95.64  E-value=0.12  Score=52.83  Aligned_cols=115  Identities=17%  Similarity=0.117  Sum_probs=63.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhh-------hhCCCcE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLEN-------ALTGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~-------al~~ADi  112 (353)
                      +.+.|+||++.+|..++..|++.|.  +|+++|++.  ......++.........+. ....+.++       .+...|+
T Consensus         6 k~~lITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          6 RVVLVTGAAGGIGRAACQRFARAGD--QVVVADRNVERARERADSLGPDHHALAMDV-SDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             eEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCCceeEEEecc-CCHHHHHHHHHHHHHHhCCCCE
Confidence            4788999999999999999999987  899999865  2222222211100000111 11112222       2346899


Q ss_pred             EEEcCCCCC---CC--CCC---HHHHHHHHHHHHHH----HHHHHHhhCCCcEEEEecC
Q 018618          113 VIIPAGVPR---KP--GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~---~~--g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tN  159 (353)
                      +|..+|...   .+  ..+   ....+..|+.....    +.+.+.+....+.+++++.
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS  141 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVAS  141 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            999988621   11  122   23345566554444    4444443333336666654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.61  E-value=0.17  Score=45.76  Aligned_cols=34  Identities=21%  Similarity=0.134  Sum_probs=30.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +++.|+||+|.+|.+++..|+..|.  +|++.|.++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~--~V~~~~r~~   36 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQ--PVIVSYRTH   36 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCc
Confidence            4789999999999999999999888  899999875

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.61  E-value=0.6  Score=42.83  Aligned_cols=114  Identities=18%  Similarity=0.145  Sum_probs=64.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh------hhhCCCcE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE------NALTGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~------~al~~ADi  112 (353)
                      +++.|+|++|.+|..++..|+..|.  +|+++|++.  ......++.... ...+..+. .-+|.+      +.+...|+
T Consensus         8 k~vlItG~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~g~id~   84 (259)
T PRK06125          8 KRVLITGASKGIGAAAAEAFAAEGC--HLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAEAGDIDI   84 (259)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999887  899999875  222233343211 11222211 112221      12467999


Q ss_pred             EEEcCCCCCC-C--CCCH---HHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecC
Q 018618          113 VIIPAGVPRK-P--GMTR---DDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~~-~--g~~r---~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +|..+|.... +  ..+.   ...+..|+...    +.+.+.+.+. ..+.++++|.
T Consensus        85 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss  140 (259)
T PRK06125         85 LVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIG  140 (259)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecC
Confidence            9999886421 1  1222   23345565544    3444444433 2355665553

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.60  E-value=0.059  Score=52.10  Aligned_cols=73  Identities=10%  Similarity=0.161  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+++|+|+ |..|...+..+....-+.+|.++|+++  ....+.++.+. ....+..+   .|+++++.+||+|+.+..
T Consensus       127 ~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~-~~~~~~~~---~~~~~~~~~aDiVi~aT~  201 (325)
T PRK08618        127 AKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSK-FNTEIYVV---NSADEAIEEADIIVTVTN  201 (325)
T ss_pred             CcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHh-cCCcEEEe---CCHHHHHhcCCEEEEccC
Confidence            348999999 999887776665443457999999986  33334444321 12233333   467889999999998753

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=95.58  E-value=0.043  Score=52.00  Aligned_cols=60  Identities=18%  Similarity=0.307  Sum_probs=43.6

Q ss_pred             EEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           46 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        46 IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||. |.+|..++..|...|+  +|.++|+++..  ..++....    ...   +.++.++++++|+||++.
T Consensus         1 ~IGl-G~mG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~g----~~~---~~s~~~~~~~advVil~v   60 (288)
T TIGR01692         1 FIGL-GNMGGPMAANLLKAGH--PVRVFDLFPDA--VEEAVAAG----AQA---AASPAEAAEGADRVITML   60 (288)
T ss_pred             CCcc-cHhHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence            5798 9999999999999887  89999987622  22233211    111   245678899999999985

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.57  E-value=0.025  Score=55.98  Aligned_cols=76  Identities=13%  Similarity=0.173  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .++||+|+||+|.+|..+...|...+.. +|.++..+...+......+... ......+. ..+ .+.++++|+|+++.+
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~-el~~l~s~~saG~~i~~~~~~l~~~~~~~~~-~~~-~~~~~~~DvVf~Alp  113 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDF-EITVMTADRKAGQSFGSVFPHLITQDLPNLV-AVK-DADFSDVDAVFCCLP  113 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCC-eEEEEEChhhcCCCchhhCccccCcccccee-cCC-HHHhcCCCEEEEcCC
Confidence            5679999999999999999998888543 8888876542232211111100 01111110 122 234789999999753

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=95.55  E-value=0.67  Score=43.22  Aligned_cols=68  Identities=25%  Similarity=0.261  Sum_probs=43.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +|||+|+|++|.+|+.++..+...+-..-+.++|.+.......  .  .  ..+..   .+|+++.++++|+||...
T Consensus         1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~--~--~--~~i~~---~~dl~~ll~~~DvVid~t   68 (257)
T PRK00048          1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ--G--A--LGVAI---TDDLEAVLADADVLIDFT   68 (257)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--C--C--CCccc---cCCHHHhccCCCEEEECC
Confidence            4799999988999999998877654332344578765211111  1  1  12222   357878788999999664

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.53  E-value=0.14  Score=47.11  Aligned_cols=34  Identities=18%  Similarity=0.096  Sum_probs=29.5

Q ss_pred             CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +.+.|+||+  +.+|..++..|++.|.  +|++.++++
T Consensus         8 k~~lItGas~~~gIG~a~a~~la~~G~--~Vi~~~r~~   43 (252)
T PRK06079          8 KKIVVMGVANKRSIAWGCAQAIKDQGA--TVIYTYQND   43 (252)
T ss_pred             CEEEEeCCCCCCchHHHHHHHHHHCCC--EEEEecCch
Confidence            478999996  5899999999999998  899998764

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.53  E-value=0.049  Score=54.64  Aligned_cols=71  Identities=23%  Similarity=0.201  Sum_probs=45.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-hCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-LTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-l~~ADiVIi~a  117 (353)
                      |||.|+|+ |.+|..++..|...|.  +++++|.++..  ...+.......-+.+ ......++++ ++++|.||++.
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~--~v~vid~~~~~--~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~   73 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENN--DVTVIDTDEER--LRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVT   73 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--cEEEEECCHHH--HHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEec
Confidence            68999999 9999999999998887  89999987622  112221110011111 0011233444 78999999974

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=95.53  E-value=0.061  Score=56.43  Aligned_cols=138  Identities=17%  Similarity=0.210  Sum_probs=82.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchh----hhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLE----NALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~----~al~~ADiVIi~  116 (353)
                      ..+|.|+|. |.+|+.++..|...+.  +++++|.|+..  +..+.+.. .+-+.+  ..++.+    ..+++||.||++
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g-~~v~~G--Dat~~~~L~~agi~~A~~vv~~  471 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKM--RITVLERDISA--VNLMRKYG-YKVYYG--DATQLELLRAAGAEKAEAIVIT  471 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhCC-CeEEEe--eCCCHHHHHhcCCccCCEEEEE
Confidence            368999999 9999999999998888  89999988621  22233322 122222  123321    235789999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN  195 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~  195 (353)
                      .+..           ..|.    .++..++++.|+..++.-+ ||.+.-      .+++. |  .+.++-=+...+.++-
T Consensus       472 ~~d~-----------~~n~----~i~~~~r~~~p~~~IiaRa~~~~~~~------~L~~~-G--a~~vv~e~~es~l~l~  527 (601)
T PRK03659        472 CNEP-----------EDTM----KIVELCQQHFPHLHILARARGRVEAH------ELLQA-G--VTQFSRETFSSALELG  527 (601)
T ss_pred             eCCH-----------HHHH----HHHHHHHHHCCCCeEEEEeCCHHHHH------HHHhC-C--CCEEEccHHHHHHHHH
Confidence            4211           3333    3556677888997776544 654322      23333 3  3445433433344454


Q ss_pred             HHHHHHhCCCCCCCc
Q 018618          196 TFVAEVLGLDPRDVD  210 (353)
Q Consensus       196 ~~lA~~l~v~~~~v~  210 (353)
                      ...=..+|++++++.
T Consensus       528 ~~~L~~lg~~~~~~~  542 (601)
T PRK03659        528 RKTLVSLGMHPHQAQ  542 (601)
T ss_pred             HHHHHHcCCCHHHHH
Confidence            445567787776653

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=95.53  E-value=0.05  Score=55.55  Aligned_cols=99  Identities=16%  Similarity=0.159  Sum_probs=59.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC--CCCC-eEEEEeCCCchhhhhCC---CcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DTGA-VVRGFLGQPQLENALTG---MDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~--~~~~-~v~~~~~t~d~~~al~~---ADiV  113 (353)
                      ..++|++||- |.+|+.+|..|+..|+  +|.++|++..+.  .++.+.  ..+. .+..   ..+++++.+.   +|+|
T Consensus         5 ~~~~IG~IGL-G~MG~~mA~nL~~~G~--~V~V~NRt~~k~--~~l~~~~~~~Ga~~~~~---a~s~~e~v~~l~~~dvI   76 (493)
T PLN02350          5 ALSRIGLAGL-AVMGQNLALNIAEKGF--PISVYNRTTSKV--DETVERAKKEGNLPLYG---FKDPEDFVLSIQKPRSV   76 (493)
T ss_pred             CCCCEEEEee-HHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHhhhhcCCccccc---CCCHHHHHhcCCCCCEE
Confidence            3468999998 9999999999999998  999999875222  222221  0011 1111   2345555554   9999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCC
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPV  161 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv  161 (353)
                      |+.....               +.+.++...+... .|+.++|..||-.
T Consensus        77 i~~v~~~---------------~aV~~Vi~gl~~~l~~G~iiID~sT~~  110 (493)
T PLN02350         77 IILVKAG---------------APVDQTIKALSEYMEPGDCIIDGGNEW  110 (493)
T ss_pred             EEECCCc---------------HHHHHHHHHHHhhcCCCCEEEECCCCC
Confidence            9974211               1223333333333 3677777777543

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.15  Score=47.72  Aligned_cols=110  Identities=18%  Similarity=0.216  Sum_probs=61.8

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh------CCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------TGM  110 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------~~A  110 (353)
                      .+.|+|| |.+|.+++..|. .|.  +|++.|++.  ......++...  ...+..+. .-+|   .+.++      ...
T Consensus         4 ~~lItGa-~gIG~~la~~l~-~G~--~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~i   77 (275)
T PRK06940          4 VVVVIGA-GGIGQAIARRVG-AGK--KVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATAQTLGPV   77 (275)
T ss_pred             EEEEECC-ChHHHHHHHHHh-CCC--EEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHhcCCC
Confidence            4566676 899999999986 665  999999875  22222333321  11222111 1122   22222      468


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                      |++|..+|... ...+....+..|+.....+++.+...- +++.+++++.
T Consensus        78 d~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS  126 (275)
T PRK06940         78 TGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIAS  126 (275)
T ss_pred             CEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEe
Confidence            99999998652 223445567778766666666555432 3344444443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.52  E-value=0.14  Score=50.19  Aligned_cols=33  Identities=30%  Similarity=0.518  Sum_probs=30.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|+|+ |.+|+.++..|+..|.. +|.++|.+.
T Consensus        30 ~VlivG~-GGlGs~~a~~La~~Gvg-~i~lvD~D~   62 (355)
T PRK05597         30 KVAVIGA-GGLGSPALLYLAGAGVG-HITIIDDDT   62 (355)
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCC-eEEEEeCCE
Confidence            9999999 99999999999998874 899999864

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=95.46  E-value=0.026  Score=55.04  Aligned_cols=71  Identities=24%  Similarity=0.420  Sum_probs=45.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||+|+||+|++|..+...|...++ ..+|..+......|...+..    ...+...  ..+ .+++.++|+||++.+
T Consensus         7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~----~~~~~v~--~~~-~~~~~~~D~vf~a~p   78 (344)
T PLN02383          7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE----GRDYTVE--ELT-EDSFDGVDIALFSAG   78 (344)
T ss_pred             CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec----CceeEEE--eCC-HHHHcCCCEEEECCC
Confidence            37999999999999999998887553 45777775544222222221    1222221  123 256789999999865

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=95.44  E-value=0.11  Score=52.02  Aligned_cols=90  Identities=20%  Similarity=0.153  Sum_probs=59.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +..+|+|+|+ |.+|..++..+...|.  +++.+|+++.+ ..+..+     +.  ..    .+.+++++++|+||.+.|
T Consensus       201 ~GktVvViG~-G~IG~~va~~ak~~Ga--~ViV~d~d~~R~~~A~~~-----G~--~~----~~~~e~v~~aDVVI~atG  266 (413)
T cd00401         201 AGKVAVVAGY-GDVGKGCAQSLRGQGA--RVIVTEVDPICALQAAME-----GY--EV----MTMEEAVKEGDIFVTTTG  266 (413)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECChhhHHHHHhc-----CC--EE----ccHHHHHcCCCEEEECCC
Confidence            4569999999 9999999999988887  78889987632 222211     11  11    123577899999999865


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      .+               ..+..  ..+....+.+++++++.+
T Consensus       267 ~~---------------~~i~~--~~l~~mk~GgilvnvG~~  291 (413)
T cd00401         267 NK---------------DIITG--EHFEQMKDGAIVCNIGHF  291 (413)
T ss_pred             CH---------------HHHHH--HHHhcCCCCcEEEEeCCC
Confidence            32               11111  113334478899999865

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.44  E-value=0.085  Score=49.96  Aligned_cols=113  Identities=17%  Similarity=0.328  Sum_probs=71.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eC----------CCchhhh
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LG----------QPQLENA  106 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~----------t~d~~~a  106 (353)
                      ....|.|+||++-+|..+|..+++.|-  .++|.|++.  ....+..+.+..   .+..+ ..          ....++.
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~--~~vl~Din~~~~~etv~~~~~~g---~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGA--KLVLWDINKQGNEETVKEIRKIG---EAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCC--eEEEEeccccchHHHHHHHHhcC---ceeEEEecCCCHHHHHHHHHHHHHh
Confidence            345899999988899999999999887  899999998  344444444321   11110 00          1223456


Q ss_pred             hCCCcEEEEcCCCC-CCCC--CCHHHH---HHHH----HHHHHHHHHHHHhhCCCcEEEEec
Q 018618          107 LTGMDLVIIPAGVP-RKPG--MTRDDL---FNIN----AGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       107 l~~ADiVIi~ag~~-~~~g--~~r~~~---~~~N----~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..+.|++|..||.. .++.  .++.+.   ++.|    ...++...+.+.+.+ ++.|+.++
T Consensus       112 ~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~Ia  172 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIA  172 (300)
T ss_pred             cCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEeh
Confidence            78999999999964 3332  333322   2233    466788888888664 55554443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=95.44  E-value=0.12  Score=51.79  Aligned_cols=92  Identities=18%  Similarity=0.147  Sum_probs=59.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ...+|+|+|. |.+|..++..+...|.  +|+++|+++.+.... ..+   +..  .    .+++++++++|+||.+.|.
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga--~ViV~d~dp~ra~~A-~~~---G~~--v----~~l~eal~~aDVVI~aTG~  277 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGA--RVIVTEVDPICALQA-AMD---GFR--V----MTMEEAAELGDIFVTATGN  277 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCchhhHHH-Hhc---CCE--e----cCHHHHHhCCCEEEECCCC
Confidence            4569999999 9999999999998887  899999987322111 111   111  1    1356788999999987542


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      +               .++.  .+.+....+.+++++++-+.
T Consensus       278 ~---------------~vI~--~~~~~~mK~GailiNvG~~d  302 (425)
T PRK05476        278 K---------------DVIT--AEHMEAMKDGAILANIGHFD  302 (425)
T ss_pred             H---------------HHHH--HHHHhcCCCCCEEEEcCCCC
Confidence            2               1121  12233334678999888543

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=95.43  E-value=0.056  Score=54.15  Aligned_cols=103  Identities=17%  Similarity=0.232  Sum_probs=64.2

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH--HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .+..+|+|+|+ |.+|..++..|...|. .+|+++|++..+.  .+..+.     ..  .+ ...++.+++.++|+||.+
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~-~~V~v~~rs~~ra~~la~~~g-----~~--~i-~~~~l~~~l~~aDvVi~a  247 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGV-GKILIANRTYERAEDLAKELG-----GE--AV-KFEDLEEYLAEADIVISS  247 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHcC-----Ce--Ee-eHHHHHHHHhhCCEEEEC
Confidence            44579999999 9999999999988773 3899999875222  222221     11  11 113567888999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCch
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  164 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~  164 (353)
                      .+.+..- .+.            +..+...... ...+++-+++|-|+-
T Consensus       248 T~s~~~i-i~~------------e~l~~~~~~~~~~~~viDla~Prdid  283 (417)
T TIGR01035       248 TGAPHPI-VSK------------EDVERALRERTRPLFIIDIAVPRDVD  283 (417)
T ss_pred             CCCCCce-EcH------------HHHHHHHhcCCCCeEEEEeCCCCCCC
Confidence            7654211 111            1111111111 245788889998866

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.42  E-value=0.075  Score=50.93  Aligned_cols=71  Identities=13%  Similarity=0.113  Sum_probs=49.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+|+|+|+ |.+|...+..+.......++.++|++.  +...+.++...  ...+.    ..++++++.+||+||.+..
T Consensus       125 ~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~--~~~~~----~~~~~~av~~aDiVitaT~  197 (304)
T PRK07340        125 PGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARAL--GPTAE----PLDGEAIPEAVDLVVTATT  197 (304)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhc--CCeeE----ECCHHHHhhcCCEEEEccC
Confidence            459999999 999999988876532336899999986  33444444432  12222    1467789999999999754

>PF02423 OCD_Mu_crystall: Ornithine cyclodeaminase/mu-crystallin family; InterPro: IPR003462 This entry represents the bacterial ornithine cyclodeaminase enzyme family, which catalyse the deamination of ornithine to proline []

Probab=95.40  E-value=0.055  Score=52.06  Aligned_cols=69  Identities=17%  Similarity=0.301  Sum_probs=46.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+++|+|+ |..+..-+..+.. .+ ..+|.++|++.  .+..+.++.+ . ...+...   .|.++|+++||+|+.+.
T Consensus       129 ~~l~viGa-G~QA~~~~~a~~~~~~-i~~v~v~~r~~~~~~~~~~~~~~-~-~~~v~~~---~~~~~av~~aDii~taT  200 (313)
T PF02423_consen  129 RTLGVIGA-GVQARWHLRALAAVRP-IKEVRVYSRSPERAEAFAARLRD-L-GVPVVAV---DSAEEAVRGADIIVTAT  200 (313)
T ss_dssp             -EEEEE---SHHHHHHHHHHHHHS---SEEEEE-SSHHHHHHHHHHHHC-C-CTCEEEE---SSHHHHHTTSSEEEE--
T ss_pred             ceEEEECC-CHHHHHHHHHHHHhCC-ceEEEEEccChhHHHHHHHhhcc-c-cccceec---cchhhhcccCCEEEEcc
Confidence            38999999 9888877766655 45 78999999987  4556667776 2 4455543   57899999999999864

The family also includes mu-crystallin, a mammalian homologue of bacterial ornithine cyclodeaminase [], which is the major component of the eye lens in several Australian marsupials. mRNA for mu-crystallin has also been found in human retina [].; PDB: 1U7H_B 1X7D_B 2I99_B 3HDJ_A 1VLL_B 1OMO_A.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.37  E-value=0.07  Score=53.99  Aligned_cols=90  Identities=21%  Similarity=0.230  Sum_probs=60.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH-HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~-~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ...+|+|+|. |.+|..+|..+...|.  +|+.+|+++... .+..  +   ..  +.    .+++++++.||+||.+.|
T Consensus       253 aGKtVgVIG~-G~IGr~vA~rL~a~Ga--~ViV~e~dp~~a~~A~~--~---G~--~~----~~leell~~ADIVI~atG  318 (476)
T PTZ00075        253 AGKTVVVCGY-GDVGKGCAQALRGFGA--RVVVTEIDPICALQAAM--E---GY--QV----VTLEDVVETADIFVTATG  318 (476)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhHHHHHh--c---Cc--ee----ccHHHHHhcCCEEEECCC
Confidence            3568999999 9999999999987777  899998876322 1111  1   11  11    246788999999999865


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      .+.               ++.  .+.+....|.+++++++-.
T Consensus       319 t~~---------------iI~--~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        319 NKD---------------IIT--LEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             ccc---------------ccC--HHHHhccCCCcEEEEcCCC
Confidence            221               111  1234444588999998854

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=95.36  E-value=0.04  Score=53.78  Aligned_cols=74  Identities=24%  Similarity=0.218  Sum_probs=44.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEE-EEeCCCcHHHHHHHhcC--CCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTADISHM--DTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~-L~D~~~~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +||+|+||+|.+|..++..|...+.. +++ +++.+...+....-.+.  .....+...  ..|.++.+.++|+|+++.+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~-el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~DvVf~alP   77 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEV-EITYLVSSRESAGKPVSEVHPHLRGLVDLNLE--PIDEEEIAEDADVVFLALP   77 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEeccchhcCCChHHhCccccccCCceee--cCCHHHhhcCCCEEEECCC
Confidence            58999999999999999999876543 666 66765422221111111  110111221  1244444468999999753

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK06407 ornithine cyclodeaminase; Provisional

Probab=95.35  E-value=0.083  Score=50.57  Aligned_cols=73  Identities=16%  Similarity=0.075  Sum_probs=51.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+++|+|+ |..|..-+..+..-..+.+|.++|++.  ....+.++.+.. ...+...   .+.++++++||+|+.+..
T Consensus       117 a~~l~iiGa-G~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~-~~~v~~~---~~~~eav~~aDIV~taT~  191 (301)
T PRK06407        117 VENFTIIGS-GFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEF-GVDIRPV---DNAEAALRDADTITSITN  191 (301)
T ss_pred             CcEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhc-CCcEEEe---CCHHHHHhcCCEEEEecC
Confidence            458999999 988887776666554568999999987  344455555421 2344443   467899999999998643

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.32  E-value=0.78  Score=42.37  Aligned_cols=156  Identities=12%  Similarity=0.108  Sum_probs=80.8

Q ss_pred             CeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcC-CCCCeEEE-EeCCCchh-------hhhCC
Q 018618           42 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRG-FLGQPQLE-------NALTG  109 (353)
Q Consensus        42 ~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~-~~~~~v~~-~~~t~d~~-------~al~~  109 (353)
                      +.+.|+||++  -+|..++..|+..|.  +|++.+.++ ....+.++... .....+.. .+...+.+       +.+..
T Consensus         9 k~~lITGas~~~GIG~a~a~~la~~G~--~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          9 KKGLITGIANNMSISWAIAQLAKKHGA--ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             cEEEEECCCCCcchHHHHHHHHHHcCC--EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4688999964  599999999998887  888888764 22223334321 10001110 11111111       22456


Q ss_pred             CcEEEEcCCCCCC-----C--CCCH---HHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          110 MDLVIIPAGVPRK-----P--GMTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       110 ADiVIi~ag~~~~-----~--g~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      .|++|..+|....     +  ..+.   ...+..|+.....+.+.+..+- ..+.|++++......            +.
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~------------~~  154 (260)
T PRK06603         87 FDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEK------------VI  154 (260)
T ss_pred             ccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcccc------------CC
Confidence            8999998875321     1  1222   2334555554444444332221 346777776533211            12


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV  213 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~v  213 (353)
                      |..-.++.+......+-+.+|..+.  +..|++..
T Consensus       155 ~~~~~Y~asKaal~~l~~~la~el~--~~gIrVn~  187 (260)
T PRK06603        155 PNYNVMGVAKAALEASVKYLANDMG--ENNIRVNA  187 (260)
T ss_pred             CcccchhhHHHHHHHHHHHHHHHhh--hcCeEEEE
Confidence            2223455555455566777877764  44454433

>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase

Probab=95.31  E-value=0.061  Score=55.52  Aligned_cols=64  Identities=22%  Similarity=0.339  Sum_probs=46.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .++|+|+|- |.+|+.+|..|..-|.  +|+.||+......+.++   .    +..   ..++++.+++||+|++..
T Consensus       138 gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvV~l~l  201 (525)
T TIGR01327       138 GKTLGVIGL-GRIGSIVAKRAKAFGM--KVLAYDPYISPERAEQL---G----VEL---VDDLDELLARADFITVHT  201 (525)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc---C----CEE---cCCHHHHHhhCCEEEEcc
Confidence            468999999 9999999999987777  99999975322222211   1    121   135788999999999974

This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.30  E-value=0.097  Score=50.37  Aligned_cols=70  Identities=16%  Similarity=0.303  Sum_probs=48.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..+|+|||+ |.+|...+..+.. .+ ..+|.++|++.  ....+.++.+.  ...+...   .+.++++++||+|+.+.
T Consensus       125 ~~~v~iiG~-G~~a~~~~~al~~~~~-~~~V~V~~Rs~~~a~~~a~~~~~~--g~~~~~~---~~~~~av~~aDIVi~aT  197 (314)
T PRK06141        125 ASRLLVVGT-GRLASLLALAHASVRP-IKQVRVWGRDPAKAEALAAELRAQ--GFDAEVV---TDLEAAVRQADIISCAT  197 (314)
T ss_pred             CceEEEECC-cHHHHHHHHHHHhcCC-CCEEEEEcCCHHHHHHHHHHHHhc--CCceEEe---CCHHHHHhcCCEEEEee
Confidence            458999998 9999999875554 44 45999999876  34444444432  1223332   45678899999997654

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.30  E-value=0.16  Score=50.04  Aligned_cols=32  Identities=31%  Similarity=0.624  Sum_probs=29.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   76 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~   76 (353)
                      ||.|+|+ |-+|+.++..|+..|. .+|.|+|.+
T Consensus       137 ~VlvvG~-GG~Gs~ia~~La~~Gv-g~i~lvD~d  168 (376)
T PRK08762        137 RVLLIGA-GGLGSPAALYLAAAGV-GTLGIVDHD  168 (376)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCC-CeEEEEeCC
Confidence            8999999 9999999999999986 489999987

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.29  E-value=0.039  Score=53.58  Aligned_cols=71  Identities=21%  Similarity=0.441  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||+|+||+|++|..++.+|...++ ..+|..+-.+...+...++..    ..+...  ..+ ..+++++|+||++.|
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g----~~i~v~--d~~-~~~~~~vDvVf~A~g   72 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKG----KELKVE--DLT-TFDFSGVDIALFSAG   72 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCC----ceeEEe--eCC-HHHHcCCCEEEECCC
Confidence            36999999999999999999988654 347777765442233222221    223332  112 245689999999864

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=95.29  E-value=0.39  Score=44.10  Aligned_cols=42  Identities=24%  Similarity=0.274  Sum_probs=32.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHh----CCCCcEEEEEeCCC--cHHHHHHHh
Q 018618           43 KVAILGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVN--TPGVTADIS   86 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~----~~~~~el~L~D~~~--~~~~~~dl~   86 (353)
                      .+.|+||++.+|..++..|+.    .|.  .|++.++++  ......++.
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~--~V~~~~r~~~~~~~~~~~l~   49 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGS--VLVLSARNDEALRQLKAEIG   49 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCc--EEEEEEcCHHHHHHHHHHHH
Confidence            478999999999999998886    465  899999876  333344454

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.22  E-value=0.21  Score=45.09  Aligned_cols=69  Identities=16%  Similarity=0.102  Sum_probs=47.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .||.|+|+ |.+|..-+..|+..|.  +|++++.+.... ..++...   ..+.......+ ...+.++|+||.+.+
T Consensus        10 k~vlVvGg-G~va~rk~~~Ll~~ga--~VtVvsp~~~~~-l~~l~~~---~~i~~~~~~~~-~~dl~~~~lVi~at~   78 (205)
T TIGR01470        10 RAVLVVGG-GDVALRKARLLLKAGA--QLRVIAEELESE-LTLLAEQ---GGITWLARCFD-ADILEGAFLVIAATD   78 (205)
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCC--EEEEEcCCCCHH-HHHHHHc---CCEEEEeCCCC-HHHhCCcEEEEECCC
Confidence            48999999 9999999999998886  899999765322 2233322   13333323333 356899999998754

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=95.19  E-value=0.11  Score=50.17  Aligned_cols=73  Identities=16%  Similarity=0.232  Sum_probs=50.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+++|||+ |..|...+..|....-+.+|.+++++.  ++..+.++.+.. ...+..   ..++++++.+||+|+.+..
T Consensus       129 ~~~v~iiGa-G~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~-g~~v~~---~~~~~~av~~aDiVvtaT~  203 (326)
T TIGR02992       129 SSVVAIFGA-GMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLL-GIDVTA---ATDPRAAMSGADIIVTTTP  203 (326)
T ss_pred             CcEEEEECC-CHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhc-CceEEE---eCCHHHHhccCCEEEEecC
Confidence            358999999 999988888776433356899999986  344444453211 122332   2567889999999999753

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.18  E-value=0.045  Score=48.12  Aligned_cols=93  Identities=26%  Similarity=0.327  Sum_probs=58.7

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC-
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG-  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag-  118 (353)
                      ...+|+|+|. |.+|+.+|..+..-|.  +|+.+|+......  ...+.    .+..    .++++.++.||+|++... 
T Consensus        35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~--~~~~~----~~~~----~~l~ell~~aDiv~~~~pl  101 (178)
T PF02826_consen   35 RGKTVGIIGY-GRIGRAVARRLKAFGM--RVIGYDRSPKPEE--GADEF----GVEY----VSLDELLAQADIVSLHLPL  101 (178)
T ss_dssp             TTSEEEEEST-SHHHHHHHHHHHHTT---EEEEEESSCHHHH--HHHHT----TEEE----SSHHHHHHH-SEEEE-SSS
T ss_pred             CCCEEEEEEE-cCCcCeEeeeeecCCc--eeEEecccCChhh--hcccc----ccee----eehhhhcchhhhhhhhhcc
Confidence            3469999999 9999999999997777  9999999763222  11111    1121    367889999999999753 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      .+...++-..              +.+.+..+++++|+++-
T Consensus       102 t~~T~~li~~--------------~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen  102 TPETRGLINA--------------EFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             STTTTTSBSH--------------HHHHTSTTTEEEEESSS
T ss_pred             ccccceeeee--------------eeeeccccceEEEeccc
Confidence            2222232111              12233347889999873

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=95.14  E-value=0.061  Score=49.64  Aligned_cols=112  Identities=13%  Similarity=0.079  Sum_probs=58.5

Q ss_pred             EEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHH----hcCC--------CCCeEEEEeCC----------Cc
Q 018618           46 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADI----SHMD--------TGAVVRGFLGQ----------PQ  102 (353)
Q Consensus        46 IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl----~~~~--------~~~~v~~~~~t----------~d  102 (353)
                      |+||+|++|+++...|+..+...+|+++-+.... .....+    .+..        ...+++.+.+.          .+
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            6899999999999988877642288888765411 111111    1110        02345554331          12


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +.+..+.+|+||++|+.-. ...+..++...|+...+++++...+.....++.+.|
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~-~~~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iST  135 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVN-FNAPYSELRAVNVDGTRNLLRLAAQGKRKRFHYIST  135 (249)
T ss_dssp             HHHHHHH--EEEE--SS-S-BS-S--EEHHHHHHHHHHHHHHHTSSS---EEEEEE
T ss_pred             hhccccccceeeecchhhh-hcccchhhhhhHHHHHHHHHHHHHhccCcceEEecc
Confidence            3333478999999986432 122344466889999999999988544334444444

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02494 adenosylhomocysteinase

Probab=95.14  E-value=0.13  Score=52.10  Aligned_cols=92  Identities=22%  Similarity=0.167  Sum_probs=61.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ...+|+|+|. |.+|..++..+...|.  +|+.+|+++.+ ..+.  .+.   ..  .    .+++++++.+|+||.+.|
T Consensus       253 aGKtVvViGy-G~IGr~vA~~aka~Ga--~VIV~e~dp~r~~eA~--~~G---~~--v----v~leEal~~ADVVI~tTG  318 (477)
T PLN02494        253 AGKVAVICGY-GDVGKGCAAAMKAAGA--RVIVTEIDPICALQAL--MEG---YQ--V----LTLEDVVSEADIFVTTTG  318 (477)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhHHHH--hcC---Ce--e----ccHHHHHhhCCEEEECCC
Confidence            3569999999 9999999999987777  89999987632 2221  111   11  1    134678899999999765


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      ...               ++.  .+.+....+++++++++-+.+
T Consensus       319 t~~---------------vI~--~e~L~~MK~GAiLiNvGr~~~  345 (477)
T PLN02494        319 NKD---------------IIM--VDHMRKMKNNAIVCNIGHFDN  345 (477)
T ss_pred             Ccc---------------chH--HHHHhcCCCCCEEEEcCCCCC
Confidence            321               110  233444457899999987643

>TIGR00518 alaDH alanine dehydrogenase

Probab=95.09  E-value=0.071  Score=52.55  Aligned_cols=82  Identities=18%  Similarity=0.217  Sum_probs=54.4

Q ss_pred             hcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCc
Q 018618           33 CRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMD  111 (353)
Q Consensus        33 ~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~AD  111 (353)
                      ....++.++.||+|+|+ |.+|...+..+...|.  +|..+|.+..+.  ..+.... ...+.. .....++.+.++++|
T Consensus       159 ~~~~~~l~~~~VlViGa-G~vG~~aa~~a~~lGa--~V~v~d~~~~~~--~~l~~~~-g~~v~~~~~~~~~l~~~l~~aD  232 (370)
T TIGR00518       159 LGGVPGVEPGDVTIIGG-GVVGTNAAKMANGLGA--TVTILDINIDRL--RQLDAEF-GGRIHTRYSNAYEIEDAVKRAD  232 (370)
T ss_pred             ecCCCCCCCceEEEEcC-CHHHHHHHHHHHHCCC--eEEEEECCHHHH--HHHHHhc-CceeEeccCCHHHHHHHHccCC
Confidence            34555667789999999 9999999999998886  799999875221  1121111 111211 111134667889999


Q ss_pred             EEEEcCCCC
Q 018618          112 LVIIPAGVP  120 (353)
Q Consensus       112 iVIi~ag~~  120 (353)
                      +||.+.+.+
T Consensus       233 vVI~a~~~~  241 (370)
T TIGR00518       233 LLIGAVLIP  241 (370)
T ss_pred             EEEEccccC
Confidence            999987543

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=95.09  E-value=0.16  Score=48.18  Aligned_cols=73  Identities=19%  Similarity=0.265  Sum_probs=50.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-------------------HH--HHHHHhcCCCCCeEEEEeCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-------------------PG--VTADISHMDTGAVVRGFLGQ  100 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-------------------~~--~~~dl~~~~~~~~v~~~~~t  100 (353)
                      .||.|+|+ |.+|+.++..|+..|. .+|.|+|.+..                   ++  .+..|........++.+...
T Consensus        20 s~VLIvG~-gGLG~EiaKnLalaGV-g~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~~~~   97 (286)
T cd01491          20 SNVLISGL-GGLGVEIAKNLILAGV-KSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVSTGP   97 (286)
T ss_pred             CcEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEEecc
Confidence            49999999 9999999999999997 48999997640                   01  11223333323455554333


Q ss_pred             CchhhhhCCCcEEEEcC
Q 018618          101 PQLENALTGMDLVIIPA  117 (353)
Q Consensus       101 ~d~~~al~~ADiVIi~a  117 (353)
                      .+ ++-+.+.|+||.+.
T Consensus        98 ~~-~~~l~~fdvVV~~~  113 (286)
T cd01491          98 LT-TDELLKFQVVVLTD  113 (286)
T ss_pred             CC-HHHHhcCCEEEEec
Confidence            23 46789999998884

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=95.07  E-value=0.14  Score=50.45  Aligned_cols=72  Identities=18%  Similarity=0.176  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhC-CC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKIN-PL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~-~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||+|+||+|.+|..+...++.. ++ ..+++++......+....+..    ....... ..+. +.++++|+|+++++
T Consensus         1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g----~~~~v~~-~~~~-~~~~~~Divf~a~~   74 (369)
T PRK06598          1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGG----KEGTLQD-AFDI-DALKKLDIIITCQG   74 (369)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCC----CcceEEe-cCCh-hHhcCCCEEEECCC
Confidence            369999999999999999755554 44 456888776432222212221    1122221 1232 56789999999865

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=95.06  E-value=0.085  Score=52.93  Aligned_cols=105  Identities=18%  Similarity=0.279  Sum_probs=64.6

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .+..+|+|+|+ |.+|..++..|...|. .+|+++|++..+  ..+.++.     ..+..   ..++.+++.++|+||.+
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~-~~V~v~~r~~~ra~~la~~~g-----~~~~~---~~~~~~~l~~aDvVI~a  249 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGV-RKITVANRTLERAEELAEEFG-----GEAIP---LDELPEALAEADIVISS  249 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCC-CeEEEEeCCHHHHHHHHHHcC-----CcEee---HHHHHHHhccCCEEEEC
Confidence            34579999999 9999999998887764 478999987522  2222221     11111   13566788999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-hhCCCcEEEEecCCCCchh
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIA-KCCPNATVNLISNPVNSTV  165 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~-~~~p~a~viv~tNPv~~~t  165 (353)
                      .+.+... .+.        +.+..   .+. +.....+++-+++|-|+-.
T Consensus       250 T~s~~~~-i~~--------~~l~~---~~~~~~~~~~vviDla~Prdid~  287 (423)
T PRK00045        250 TGAPHPI-IGK--------GMVER---ALKARRHRPLLLVDLAVPRDIEP  287 (423)
T ss_pred             CCCCCcE-EcH--------HHHHH---HHhhccCCCeEEEEeCCCCCCcc
Confidence            7654211 111        11111   111 1124578888899988663

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.05  E-value=0.075  Score=46.48  Aligned_cols=56  Identities=29%  Similarity=0.488  Sum_probs=44.4

Q ss_pred             CCCCeEEEEcCCCC-cHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           39 AAGFKVAILGAAGG-IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        39 ~~~~KI~IiGa~G~-vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      -...||.|+|+ |. +|..++..|...|.  ++.+++.+.                       .++.+.+++||+||.+.
T Consensus        42 l~gk~vlViG~-G~~~G~~~a~~L~~~g~--~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat   95 (168)
T cd01080          42 LAGKKVVVVGR-SNIVGKPLAALLLNRNA--TVTVCHSKT-----------------------KNLKEHTKQADIVIVAV   95 (168)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHhhCCC--EEEEEECCc-----------------------hhHHHHHhhCCEEEEcC
Confidence            44569999999 86 58889999988876  788888641                       24567899999999987


Q ss_pred             CCC
Q 018618          118 GVP  120 (353)
Q Consensus       118 g~~  120 (353)
                      +.|
T Consensus        96 ~~~   98 (168)
T cd01080          96 GKP   98 (168)
T ss_pred             CCC
Confidence            766

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.05  E-value=0.25  Score=42.66  Aligned_cols=65  Identities=12%  Similarity=0.073  Sum_probs=43.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .||.|+|| |.||...+..|...|.  +|++++...... ..++.      .+......-+ ++.++++|+||.+.
T Consensus        14 ~~vlVvGG-G~va~rka~~Ll~~ga--~V~VIsp~~~~~-l~~l~------~i~~~~~~~~-~~dl~~a~lViaaT   78 (157)
T PRK06719         14 KVVVIIGG-GKIAYRKASGLKDTGA--FVTVVSPEICKE-MKELP------YITWKQKTFS-NDDIKDAHLIYAAT   78 (157)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCccCHH-HHhcc------CcEEEecccC-hhcCCCceEEEECC
Confidence            48999999 9999999999998887  889997543222 12221      1111111122 35689999999974

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.05  E-value=0.073  Score=54.92  Aligned_cols=64  Identities=25%  Similarity=0.344  Sum_probs=46.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|+|. |.+|+.+|..+..-|.  +|+.||.........++       .+...    ++++.++.||+|++..
T Consensus       139 ~gktvgIiG~-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~-------g~~~~----~l~ell~~aDiV~l~l  202 (526)
T PRK13581        139 YGKTLGIIGL-GRIGSEVAKRAKAFGM--KVIAYDPYISPERAAQL-------GVELV----SLDELLARADFITLHT  202 (526)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhc-------CCEEE----cHHHHHhhCCEEEEcc
Confidence            3469999999 9999999999987777  99999975422221111       11221    4678899999999975

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=95.03  E-value=0.11  Score=50.13  Aligned_cols=73  Identities=26%  Similarity=0.399  Sum_probs=46.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHH-HHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~-~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||+|+||+|.||+.+...|.+.. .+.++.++=..+..|.. .++..-.. .....   ..| ...++++|+|++++|
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~~~-~v~~~---~~~-~~~~~~~Divf~~ag   75 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGKSI-GVPED---AAD-EFVFSDVDIVFFAAG   75 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCccc-cCccc---ccc-ccccccCCEEEEeCc
Confidence            3699999999999999999999854 46667777765533332 33332111 00110   023 245679999999875

>TIGR00936 ahcY adenosylhomocysteinase

Probab=94.98  E-value=0.12  Score=51.43  Aligned_cols=67  Identities=25%  Similarity=0.231  Sum_probs=46.9

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ....+|+|+|. |.+|..++..+...|.  +|+.+|.++.+.... ..+   ..  ..    .+.+++++++|+||.+.|
T Consensus       193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga--~ViV~d~dp~r~~~A-~~~---G~--~v----~~leeal~~aDVVItaTG  259 (406)
T TIGR00936       193 IAGKTVVVAGY-GWCGKGIAMRARGMGA--RVIVTEVDPIRALEA-AMD---GF--RV----MTMEEAAKIGDIFITATG  259 (406)
T ss_pred             CCcCEEEEECC-CHHHHHHHHHHhhCcC--EEEEEeCChhhHHHH-Hhc---CC--Ee----CCHHHHHhcCCEEEECCC
Confidence            34569999999 9999999999987776  899999877322111 111   11  11    124578899999998754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.94  E-value=1.4  Score=41.24  Aligned_cols=34  Identities=21%  Similarity=0.037  Sum_probs=29.3

Q ss_pred             CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +.+.|+||+  +-+|..++..|++.|.  .|++.|+++
T Consensus         6 k~~lItGas~~~GIG~aiA~~la~~G~--~Vil~~r~~   41 (274)
T PRK08415          6 KKGLIVGVANNKSIAYGIAKACFEQGA--ELAFTYLNE   41 (274)
T ss_pred             cEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEecCH
Confidence            478899985  5799999999999997  899999874

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.93  E-value=0.24  Score=49.25  Aligned_cols=33  Identities=24%  Similarity=0.513  Sum_probs=30.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||.|+|+ |.+|+.++..|+..|+. +|.|+|.+.
T Consensus        44 ~VlviG~-GGlGs~va~~La~~Gvg-~i~lvD~D~   76 (392)
T PRK07878         44 RVLVIGA-GGLGSPTLLYLAAAGVG-TLGIVEFDV   76 (392)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCC-eEEEECCCE
Confidence            9999999 99999999999999874 899999764

>PRK07041 short chain dehydrogenase; Provisional

Probab=94.87  E-value=0.18  Score=45.20  Aligned_cols=107  Identities=15%  Similarity=0.217  Sum_probs=61.0

Q ss_pred             EEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe----CCCchhhhhC---CCcEEEEc
Q 018618           46 ILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLENALT---GMDLVIIP  116 (353)
Q Consensus        46 IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al~---~ADiVIi~  116 (353)
                      |+||+|.+|..++..|++.|.  +|++++++.  ......++.. .  ..+..+.    ...+++++++   ..|++|..
T Consensus         2 ItGas~~iG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~-~--~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~   76 (230)
T PRK07041          2 VVGGSSGIGLALARAFAAEGA--RVTIASRSRDRLAAAARALGG-G--APVRTAALDITDEAAVDAFFAEAGPFDHVVIT   76 (230)
T ss_pred             eecCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-C--CceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence            899999999999999999987  899999875  2222223321 1  1222211    1122333333   46999999


Q ss_pred             CCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          117 AGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       117 ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +|.....   ..+   ....+..|+.....+.+ +......+.+++++
T Consensus        77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~-~~~~~~~g~iv~~s  123 (230)
T PRK07041         77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR-AARIAPGGSLTFVS  123 (230)
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh-hhhhcCCeEEEEEC
Confidence            8764221   111   23345667666666666 22233445555544

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=94.86  E-value=0.062  Score=51.90  Aligned_cols=73  Identities=26%  Similarity=0.220  Sum_probs=47.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC--CCeEEEEeCCCchhh-hhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLEN-ALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~--~~~v~~~~~t~d~~~-al~~ADiVIi~  116 (353)
                      ++||+|+||+|+.|..+..+|...+.. |+.++...+..|....-.|...  ...+...  +.|.++ ...+||+||++
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~v-e~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~--~~~~~~~~~~~~DvvFla   77 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDV-ELILISSRERAGKPVSDVHPNLRGLVDLPFQ--TIDPEKIELDECDVVFLA   77 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCe-EEEEeechhhcCCchHHhCcccccccccccc--cCChhhhhcccCCEEEEe
Confidence            569999999999999999999988754 6888887654444332233221  1122221  123223 24569999997

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=94.86  E-value=0.87  Score=44.26  Aligned_cols=117  Identities=19%  Similarity=0.209  Sum_probs=68.7

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhhCC-CcEEEE
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTG-MDLVII  115 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~-ADiVIi  115 (353)
                      -.+..+|+|+|+ |-+|..-.+..+..+.  +|+.+|+++. ...+.+|.-   ..-+.. . ..|.-+++++ +|+||.
T Consensus       164 ~~pG~~V~I~G~-GGlGh~avQ~Aka~ga--~Via~~~~~~K~e~a~~lGA---d~~i~~-~-~~~~~~~~~~~~d~ii~  235 (339)
T COG1064         164 VKPGKWVAVVGA-GGLGHMAVQYAKAMGA--EVIAITRSEEKLELAKKLGA---DHVINS-S-DSDALEAVKEIADAIID  235 (339)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHcCC--eEEEEeCChHHHHHHHHhCC---cEEEEc-C-CchhhHHhHhhCcEEEE
Confidence            344569999999 8788877777776774  9999999873 233443321   111221 1 1233344443 999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC-CchhHH-HHHHHHHhCCCCCCceEee
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV-NSTVPI-AAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv-~~~t~~-~~~~~~~~~~~~~~kviG~  186 (353)
                      |++ +.                  .+-..++...+++.++.+++|- .....+ ...+     -+...+|.|.
T Consensus       236 tv~-~~------------------~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~l-----i~~~~~i~GS  284 (339)
T COG1064         236 TVG-PA------------------TLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLL-----ILKEISIVGS  284 (339)
T ss_pred             CCC-hh------------------hHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHh-----hhcCeEEEEE
Confidence            975 31                  2222333345789999999994 332211 1111     1345688887

>PRK06823 ornithine cyclodeaminase; Validated

Probab=94.83  E-value=0.18  Score=48.66  Aligned_cols=72  Identities=13%  Similarity=0.098  Sum_probs=50.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+++|+|+ |..+..-+..+..-....+|.++|++.  +...+..+.+.  ...+...   ++.++++++||+|+.+..
T Consensus       128 ~~~l~iiG~-G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~--~~~v~~~---~~~~~av~~ADIV~taT~  201 (315)
T PRK06823        128 VSAIGIVGT-GIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQAL--GFAVNTT---LDAAEVAHAANLIVTTTP  201 (315)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhc--CCcEEEE---CCHHHHhcCCCEEEEecC
Confidence            458999999 988888777666554568999999987  33333334332  2334432   467899999999998643

>PRK08017 oxidoreductase; Provisional

Probab=94.81  E-value=0.11  Score=47.55  Aligned_cols=33  Identities=24%  Similarity=0.193  Sum_probs=30.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +|.|+||+|.+|.+++..|++.|.  ++++++++.
T Consensus         4 ~vlVtGasg~IG~~la~~l~~~g~--~v~~~~r~~   36 (256)
T PRK08017          4 SVLITGCSSGIGLEAALELKRRGY--RVLAACRKP   36 (256)
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            799999999999999999998887  889998865

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.79  E-value=0.12  Score=54.55  Aligned_cols=137  Identities=18%  Similarity=0.229  Sum_probs=81.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCch----hhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL----ENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~----~~al~~ADiVIi~  116 (353)
                      ..+|.|+|. |.+|+.++..|...+.  +++++|.|+.+  +..+.+... .-+.+  ..+|.    +..+++||.||++
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~--~vvvID~d~~~--v~~~~~~g~-~v~~G--Dat~~~~L~~agi~~A~~vvv~  471 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGV--KMTVLDHDPDH--IETLRKFGM-KVFYG--DATRMDLLESAGAAKAEVLINA  471 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCC--CEEEEECCHHH--HHHHHhcCC-eEEEE--eCCCHHHHHhcCCCcCCEEEEE
Confidence            358999999 9999999999998887  88999998622  222332221 22222  12332    1345689999988


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRAN  195 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~  195 (353)
                      ...+           ..|.    .++..+++..|+..++.-+ |+.+ .     +.+++. |  .+.++--+.-.+.++-
T Consensus       472 ~~d~-----------~~n~----~i~~~ar~~~p~~~iiaRa~d~~~-~-----~~L~~~-G--ad~v~~e~~e~sl~l~  527 (621)
T PRK03562        472 IDDP-----------QTSL----QLVELVKEHFPHLQIIARARDVDH-Y-----IRLRQA-G--VEKPERETFEGALKSG  527 (621)
T ss_pred             eCCH-----------HHHH----HHHHHHHHhCCCCeEEEEECCHHH-H-----HHHHHC-C--CCEEehhhHhHHHHHH
Confidence            4211           3343    4555666678987766554 4332 1     122232 3  3445444555555666


Q ss_pred             HHHHHHhCCCCCCC
Q 018618          196 TFVAEVLGLDPRDV  209 (353)
Q Consensus       196 ~~lA~~l~v~~~~v  209 (353)
                      +.+-+.+|++++++
T Consensus       528 ~~~L~~lg~~~~~~  541 (621)
T PRK03562        528 RLVLESLGLGPYEA  541 (621)
T ss_pred             HHHHHHcCCCHHHH
Confidence            66667777776443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.79  E-value=1.2  Score=41.45  Aligned_cols=152  Identities=14%  Similarity=0.131  Sum_probs=79.6

Q ss_pred             CeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCch----------hhhhC
Q 018618           42 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~----------~~al~  108 (353)
                      +.+.|+||++  -+|..++..|++.|.  .|++.|+++. .....++.+.. ...+-....-+|.          .+.+.
T Consensus         8 k~~lVTGas~~~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~-g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          8 KRGLIMGVANDHSIAWGIAKQLAAQGA--ELAFTYQGEALGKRVKPLAESL-GSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CEEEEeCCCCCCcHHHHHHHHHHhCCC--EEEEecCchHHHHHHHHHHHhc-CCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4688999964  799999999999998  8999987642 11222332111 1111010011121          12235


Q ss_pred             CCcEEEEcCCCCCC-----C--CCCHH---HHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHH
Q 018618          109 GMDLVIIPAGVPRK-----P--GMTRD---DLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-----~--g~~r~---~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                      .-|++|..+|....     +  ..+..   ..+..|+....    .+.+.+.   ..+.||++|......          
T Consensus        85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~---~~G~Iv~isS~~~~~----------  151 (271)
T PRK06505         85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMP---DGGSMLTLTYGGSTR----------  151 (271)
T ss_pred             CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhc---cCceEEEEcCCCccc----------
Confidence            68999999986421     1  12222   23445554443    3444443   246666665432211          


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceE
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV  213 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~v  213 (353)
                        +.|..-.++.+......+-+.+|..++  +..|++..
T Consensus       152 --~~~~~~~Y~asKaAl~~l~r~la~el~--~~gIrVn~  186 (271)
T PRK06505        152 --VMPNYNVMGVAKAALEASVRYLAADYG--PQGIRVNA  186 (271)
T ss_pred             --cCCccchhhhhHHHHHHHHHHHHHHHh--hcCeEEEE
Confidence              122223455554445556777888763  44454333

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=94.77  E-value=0.077  Score=48.84  Aligned_cols=74  Identities=15%  Similarity=0.163  Sum_probs=49.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      |+|.|+||+|++|++++..|...+.  +++..-++.......  . .........+.....+..+++|.|.++++.+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~--~v~~~~r~~~~~~~~--~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGH--EVRAAVRNPEAAAAL--A-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCC--EEEEEEeCHHHHHhh--c-CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence            5899999999999999999998876  777766654222222  2 111111111223356678889999999986543

>KOG2711 consensus Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase [Energy production and conversion]

Probab=94.76  E-value=0.42  Score=46.14  Aligned_cols=123  Identities=20%  Similarity=0.348  Sum_probs=69.1

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhC----C-CCcEEEEEeCCC-cHH---HHHHHh---cCC--C------CCeEEEEe
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKIN----P-LVSVLHLYDVVN-TPG---VTADIS---HMD--T------GAVVRGFL   98 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~----~-~~~el~L~D~~~-~~~---~~~dl~---~~~--~------~~~v~~~~   98 (353)
                      ..+.||+|||+ |+=|+++|..+..+    + ...+|.+.-..+ ..+   ...|.-   |..  +      +..+.   
T Consensus        19 ~~~~kV~ivGs-GnWGsaiaki~~~n~~~~~~f~~~Vrmwv~ee~i~~~~~~L~eiIN~~heN~KYlpg~~lP~Nvv---   94 (372)
T KOG2711|consen   19 RDPLKVCIVGS-GNWGSAIAKIVGENVKEFPIFDPQVRMWVFEEEINGEAEKLTEIINSRHENVKYLPGIKLPENVV---   94 (372)
T ss_pred             cCceEEEEEcc-ChHHHHHHHHHhhhhhhccccCceeeEEEeccccCChhHHHHHHhccccccccccCCccCCCCeE---
Confidence            34579999998 99999999877653    1 112333332222 222   222221   111  1      12333   


Q ss_pred             CCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc-----hhHHHHHHH
Q 018618           99 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS-----TVPIAAEVF  172 (353)
Q Consensus        99 ~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~-----~t~~~~~~~  172 (353)
                      ..+|+.++.+|||++|+..  |              -+.+.+++++|..+- |++..|-.+-=++.     -..+++++.
T Consensus        95 Av~dl~ea~~dADilvf~v--P--------------hQf~~~ic~~l~g~vk~~~~aISL~KG~e~~~~g~~i~liS~iI  158 (372)
T KOG2711|consen   95 AVPDLVEAAKDADILVFVV--P--------------HQFIPRICEQLKGYVKPGATAISLIKGVEVGEEGPGIRLISQII  158 (372)
T ss_pred             ecchHHHHhccCCEEEEeC--C--------------hhhHHHHHHHHhcccCCCCeEEEeecceeccCCCCceeehHHHH
Confidence            3579999999999999973  3              233667888888776 56655544321110     012234555


Q ss_pred             HHhCCCCCC
Q 018618          173 KKAGTYDPK  181 (353)
Q Consensus       173 ~~~~~~~~~  181 (353)
                      .+..|+|-.
T Consensus       159 ~~~lgI~~~  167 (372)
T KOG2711|consen  159 HRALGIPCS  167 (372)
T ss_pred             HHHhCCCce
Confidence            666677655

>PRK07589 ornithine cyclodeaminase; Validated

Probab=94.75  E-value=0.14  Score=49.92  Aligned_cols=71  Identities=18%  Similarity=0.295  Sum_probs=50.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..+++|||+ |..+..-+..+..-..+.+|.++|++.  ....+.++.+.  ...+..   .++.++++++||+|+.+.
T Consensus       129 a~~l~iiGa-G~QA~~~l~a~~~vr~i~~V~v~~r~~~~a~~~~~~~~~~--~~~v~~---~~~~~~av~~ADIIvtaT  201 (346)
T PRK07589        129 SRTMALIGN-GAQSEFQALAFKALLGIEEIRLYDIDPAATAKLARNLAGP--GLRIVA---CRSVAEAVEGADIITTVT  201 (346)
T ss_pred             CcEEEEECC-cHHHHHHHHHHHHhCCceEEEEEeCCHHHHHHHHHHHHhc--CCcEEE---eCCHHHHHhcCCEEEEec
Confidence            458999999 988877765555433467999999987  34455555542  223443   257899999999999865

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.74  E-value=0.92  Score=43.25  Aligned_cols=33  Identities=15%  Similarity=0.155  Sum_probs=29.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   76 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~   76 (353)
                      +.+.|+||++.+|..++..|+..|.  .|++++++
T Consensus         9 k~~lITGgs~GIG~aia~~la~~G~--~Vv~~~r~   41 (305)
T PRK08303          9 KVALVAGATRGAGRGIAVELGAAGA--TVYVTGRS   41 (305)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEecc
Confidence            4788999999999999999999887  89999886

>PRK07411 hypothetical protein; Validated

Probab=94.73  E-value=0.32  Score=48.29  Aligned_cols=33  Identities=24%  Similarity=0.515  Sum_probs=30.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|+|+ |-+|+.++..|+..|+ .+|.|+|.+.
T Consensus        40 ~VlivG~-GGlG~~va~~La~~Gv-g~l~lvD~D~   72 (390)
T PRK07411         40 SVLCIGT-GGLGSPLLLYLAAAGI-GRIGIVDFDV   72 (390)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCC-CEEEEECCCE
Confidence            9999999 9999999999999997 4999999864

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=94.69  E-value=0.22  Score=40.57  Aligned_cols=71  Identities=25%  Similarity=0.315  Sum_probs=39.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCCcHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNTPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ||+|+|++|.+|..++..|...+.+ +++-+ +.+...+......+.... .....+ ...+++  ..++|+|+++.
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~-~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~   73 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDF-EVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLAL   73 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCc-eEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcC
Confidence            6899998799999999888886433 44444 654322222111221110 001111 113442  35999999974

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=94.69  E-value=0.13  Score=44.53  Aligned_cols=65  Identities=14%  Similarity=0.152  Sum_probs=42.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .++|+|||- |.-|..-|..|...|+  +|+.-..........--++. +    +    ..+.++|.+.||+|+++.
T Consensus         4 ~k~IAViGy-GsQG~a~AlNLrDSG~--~V~Vglr~~s~s~~~A~~~G-f----~----v~~~~eAv~~aDvV~~L~   68 (165)
T PF07991_consen    4 GKTIAVIGY-GSQGHAHALNLRDSGV--NVIVGLREGSASWEKAKADG-F----E----VMSVAEAVKKADVVMLLL   68 (165)
T ss_dssp             TSEEEEES--SHHHHHHHHHHHHCC---EEEEEE-TTCHHHHHHHHTT------E----CCEHHHHHHC-SEEEE-S
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCC--CEEEEecCCCcCHHHHHHCC-C----e----eccHHHHHhhCCEEEEeC
Confidence            459999999 9999999999999998  77766665532222212221 1    1    135689999999999983

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional

Probab=94.67  E-value=0.25  Score=48.17  Aligned_cols=55  Identities=11%  Similarity=0.017  Sum_probs=35.6

Q ss_pred             HHHHHHHHHhCCCCcEEEEEeCCCcH--H-HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           54 GQPLAMLMKINPLVSVLHLYDVVNTP--G-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        54 G~~la~~l~~~~~~~el~L~D~~~~~--~-~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |..+|..|+..|+  +|+++|+++..  . ....+...    .++.   ++|..+++++||+||++.
T Consensus        32 G~~MA~~La~aG~--~V~v~Dr~~~~l~~~~~~~l~~~----Gi~~---asd~~eaa~~ADvVIlaV   89 (342)
T PRK12557         32 GSRMAIEFAEAGH--DVVLAEPNRSILSEELWKKVEDA----GVKV---VSDDAEAAKHGEIHILFT   89 (342)
T ss_pred             HHHHHHHHHhCCC--eEEEEECCHHHhhHHHHHHHHHC----CCEE---eCCHHHHHhCCCEEEEEC
Confidence            6778888888887  99999987621  1 11122221    1232   235567889999999984

>PF03059 NAS: Nicotianamine synthase protein; InterPro: IPR004298 Nicotianamine synthase 2

Probab=94.66  E-value=0.16  Score=47.91  Aligned_cols=106  Identities=20%  Similarity=0.244  Sum_probs=47.9

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhc--CCCCCeEEEEeCC-CchhhhhCCCcEE
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISH--MDTGAVVRGFLGQ-PQLENALTGMDLV  113 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~--~~~~~~v~~~~~t-~d~~~al~~ADiV  113 (353)
                      +..+.||+.||. |.+-.+........+....++-+|+++ +...+..+..  ......+++..+. .+....+++.|+|
T Consensus       118 ~~~p~rVaFIGS-GPLPlT~i~la~~~~~~~~v~~iD~d~~A~~~a~~lv~~~~~L~~~m~f~~~d~~~~~~dl~~~DvV  196 (276)
T PF03059_consen  118 GDPPSRVAFIGS-GPLPLTSIVLAKQHGPGARVHNIDIDPEANELARRLVASDLGLSKRMSFITADVLDVTYDLKEYDVV  196 (276)
T ss_dssp             TT---EEEEE----SS-HHHHHHH--HTT--EEEEEESSHHHHHHHHHHHH---HH-SSEEEEES-GGGG-GG----SEE
T ss_pred             CcccceEEEEcC-CCcchHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhcccccCCeEEEecchhccccccccCCEE
Confidence            335679999998 999888665554444444789999987 4434433322  1112345544321 2333457899999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEE
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL  156 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv  156 (353)
                      ++++-+    |++..        -..++.+.+.++. |++.|++
T Consensus       197 ~lAalV----g~~~e--------~K~~Il~~l~~~m~~ga~l~~  228 (276)
T PF03059_consen  197 FLAALV----GMDAE--------PKEEILEHLAKHMAPGARLVV  228 (276)
T ss_dssp             EE-TT-----S------------SHHHHHHHHHHHS-TTSEEEE
T ss_pred             EEhhhc----ccccc--------hHHHHHHHHHhhCCCCcEEEE
Confidence            998632    22221        1345555555554 6776654

5.1.43 from EC catalyzes the trimerization of S-adenosylmethionine to yield one molecule of nicotianamine. Nicotianamine has an important role in plant iron uptake mechanisms. Plants adopt two strategies (termed I and II) of iron acquisition. Strategy I is adopted by all higher plants except graminaceous plants, which adopt strategy II [, ]. In strategy I plants, the role of nicotianamine is not fully determined: possible roles include the formation of more stable complexes with ferrous than with ferric ion, which might serve as a sensor of the physiological status of iron within a plant, or which might be involved in the transport of iron []. In strategy II (graminaceous) plants, nicotianamine is the key intermediate (and nicotianamine synthase the key enzyme) in the synthesis of the mugineic family (the only known family in plants) of phytosiderophores. Phytosiderophores are iron chelators whose secretion by the roots is greatly increased in instances of iron deficiency []. The 3D structures of five example NAS from Methanothermobacter thermautotrophicus reveal the monomer to consist of a five-helical bundle N-terminal domain on top of a classic Rossmann fold C-terminal domain. The N-terminal domain is unique to the NAS family, whereas the C-terminal domain is homologous to the class I family of SAM-dependent methyltransferases. An active site is created at the interface of the two domains, at the rim of a large cavity that corresponds to the nucleotide binding site such as is found in other proteins adopting a Rossmann fold [].; GO: 0030410 nicotianamine synthase activity, 0030418 nicotianamine biosynthetic process; PDB: 3O31_B 3FPH_A 3FPJ_A 3FPE_B 3FPF_B 3FPG_B.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=94.66  E-value=0.23  Score=51.00  Aligned_cols=125  Identities=15%  Similarity=0.161  Sum_probs=72.9

Q ss_pred             HHHhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCC
Q 018618           13 RISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTG   91 (353)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~   91 (353)
                      ...+|.|+-.     |. -+-++.+..++.||.|+|+ |.+|...+..+...|-  +|+.+|.++ ....+..+.-. + 
T Consensus       143 ~~aa~~~~~~-----~~-g~~taaG~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA--~V~a~D~~~~rle~aeslGA~-~-  211 (509)
T PRK09424        143 IEAAHEFGRF-----FT-GQITAAGKVPPAKVLVIGA-GVAGLAAIGAAGSLGA--IVRAFDTRPEVAEQVESMGAE-F-  211 (509)
T ss_pred             HHHHHHhccc-----CC-CceeccCCcCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCe-E-
Confidence            3445666532     22 3345566778899999999 9999999888888886  799999987 33333332110 0 


Q ss_pred             CeEEEE-----------eCCCch--------hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCc
Q 018618           92 AVVRGF-----------LGQPQL--------ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA  152 (353)
Q Consensus        92 ~~v~~~-----------~~t~d~--------~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a  152 (353)
                      ..+...           ..+.++        .+.++++|+||.+++.|.++.-         .-+.++..+.+   .|.+
T Consensus       212 v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~aP---------~lit~~~v~~m---kpGg  279 (509)
T PRK09424        212 LELDFEEEGGSGDGYAKVMSEEFIKAEMALFAEQAKEVDIIITTALIPGKPAP---------KLITAEMVASM---KPGS  279 (509)
T ss_pred             EEeccccccccccchhhhcchhHHHHHHHHHHhccCCCCEEEECCCCCcccCc---------chHHHHHHHhc---CCCC
Confidence            001000           001121        1223689999999987642211         00123444443   3888


Q ss_pred             EEEEecCC
Q 018618          153 TVNLISNP  160 (353)
Q Consensus       153 ~viv~tNP  160 (353)
                      .|+.++.+
T Consensus       280 vIVdvg~~  287 (509)
T PRK09424        280 VIVDLAAE  287 (509)
T ss_pred             EEEEEccC
Confidence            88888764

>PRK08862 short chain dehydrogenase; Provisional

Probab=94.65  E-value=1.1  Score=40.58  Aligned_cols=114  Identities=14%  Similarity=0.107  Sum_probs=64.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eC---CCchhh-------hhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LG---QPQLEN-------ALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~---t~d~~~-------al~  108 (353)
                      +.+.|+||++.+|..++..|++.|.  +|+++++++  .+....++....  ..+..+ ..   ..+.++       .+.
T Consensus         6 k~~lVtGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~i~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          6 SIILITSAGSVLGRTISCHFARLGA--TLILCDQDQSALKDTYEQCSALT--DNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             eEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4789999988999999999999998  899999876  222333333211  111111 11   112211       223


Q ss_pred             -CCcEEEEcCCCCCCC----CCCHHH---HHHHHH----HHHHHHHHHHHhhCCCcEEEEecC
Q 018618          109 -GMDLVIIPAGVPRKP----GMTRDD---LFNINA----GIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~----g~~r~~---~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                       .-|++|..+|....+    ..+..+   .+..|.    ...+...+.+.+....+.|+++|.
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS  144 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS  144 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence             689999998742211    122222   223343    334445556655444566666664

>PRK07877 hypothetical protein; Provisional

Probab=94.60  E-value=0.17  Score=53.99  Aligned_cols=74  Identities=22%  Similarity=0.382  Sum_probs=49.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----cHHH---------------HHHHhcCCCCCeEEEEeC--
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGV---------------TADISHMDTGAVVRGFLG--   99 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~~~~---------------~~dl~~~~~~~~v~~~~~--   99 (353)
                      .||+|+|+ | +|++++..|+..|.+.+|.|+|-+.     ++-+               +..+........+..+..  
T Consensus       108 ~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~~i  185 (722)
T PRK07877        108 LRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTDGL  185 (722)
T ss_pred             CCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            49999999 9 9999999999999877999999865     1111               112222222334444321  


Q ss_pred             -CCchhhhhCCCcEEEEcC
Q 018618          100 -QPQLENALTGMDLVIIPA  117 (353)
Q Consensus       100 -t~d~~~al~~ADiVIi~a  117 (353)
                       ..+..+-+.++|+||-+.
T Consensus       186 ~~~n~~~~l~~~DlVvD~~  204 (722)
T PRK07877        186 TEDNVDAFLDGLDVVVEEC  204 (722)
T ss_pred             CHHHHHHHhcCCCEEEECC
Confidence             235555678999999873

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=94.59  E-value=0.072  Score=51.82  Aligned_cols=71  Identities=21%  Similarity=0.397  Sum_probs=45.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||+|+||+|++|.-+..+|.+.++ ..+|.++-..+..|..+.+..    ..+...  ..+. .+++++|+|+++.+
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~~----~~l~~~--~~~~-~~~~~vD~vFla~p   75 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFAG----KNLRVR--EVDS-FDFSQVQLAFFAAG   75 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccCC----cceEEe--eCCh-HHhcCCCEEEEcCC
Confidence            46999999999999999999986543 457777765442232222221    123321  1232 34789999999753

>PLN00203 glutamyl-tRNA reductase

Probab=94.59  E-value=0.21  Score=51.44  Aligned_cols=104  Identities=13%  Similarity=0.144  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..||+|||+ |.+|..++..|...|. .+|++++++...  ..+..+.  .  ..+... ...++.+++.+||+||.+.+
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~-~~V~V~nRs~era~~La~~~~--g--~~i~~~-~~~dl~~al~~aDVVIsAT~  338 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGC-TKMVVVNRSEERVAALREEFP--D--VEIIYK-PLDEMLACAAEADVVFTSTS  338 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHhC--C--CceEee-cHhhHHHHHhcCCEEEEccC
Confidence            569999999 9999999998887774 479999987522  2222221  1  122221 12456688999999998755


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhh----CCCcEEEEecCCCCch
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNST  164 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNPv~~~  164 (353)
                      .+.. =            +..+.++.+.+.    ...-++|-++.|=|+-
T Consensus       339 s~~p-v------------I~~e~l~~~~~~~~~~~~~~~~IDLAvPRdId  375 (519)
T PLN00203        339 SETP-L------------FLKEHVEALPPASDTVGGKRLFVDISVPRNVG  375 (519)
T ss_pred             CCCC-e------------eCHHHHHHhhhcccccCCCeEEEEeCCCCCCc
Confidence            4321 1            112333333211    1224677789997765

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.56  E-value=0.33  Score=49.28  Aligned_cols=123  Identities=14%  Similarity=0.075  Sum_probs=67.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .+|.|+|+ |.+|..+|..|.+.|.  +|.++|..+.   ......+...    .+....++ +. +...++|+||++.|
T Consensus        17 ~~v~viG~-G~~G~~~A~~L~~~G~--~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~-~~-~~~~~~D~Vv~s~G   87 (480)
T PRK01438         17 LRVVVAGL-GVSGFAAADALLELGA--RVTVVDDGDDERHRALAAILEAL----GATVRLGP-GP-TLPEDTDLVVTSPG   87 (480)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchhhhHHHHHHHHHc----CCEEEECC-Cc-cccCCCCEEEECCC
Confidence            48999999 9999999999988887  8999997651   1112224332    12222222 11 23567999999988


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHH--HHHHhhCCCcEEEEecCCC--CchhHHHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLC--EGIAKCCPNATVNLISNPV--NSTVPIAAEVFKK  174 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~--~~i~~~~p~a~viv~tNPv--~~~t~~~~~~~~~  174 (353)
                      .+..... .......+++++.+.-  -.+.+...+..+|-+|=..  ...+.+++.++..
T Consensus        88 i~~~~~~-~~~a~~~gi~v~~~~e~~~~~~~~~~~~~~I~VTGTnGKTTTt~mi~~iL~~  146 (480)
T PRK01438         88 WRPDAPL-LAAAADAGIPVWGEVELAWRLRDPDRPAPWLAVTGTNGKTTTVQMLASMLRA  146 (480)
T ss_pred             cCCCCHH-HHHHHHCCCeecchHHHHHHhhhccCCCCEEEEeCCCcHHHHHHHHHHHHHH
Confidence            7532211 0111233444543322  1221111234456666444  3555666666644

>PRK06436 glycerate dehydrogenase; Provisional

Probab=94.55  E-value=0.14  Score=49.19  Aligned_cols=95  Identities=18%  Similarity=0.237  Sum_probs=60.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ..++|+|+|- |.+|+.+|..+..-|.  +|+.+|+....        ..  .. ..   ..++++.++.||+|++....
T Consensus       121 ~gktvgIiG~-G~IG~~vA~~l~afG~--~V~~~~r~~~~--------~~--~~-~~---~~~l~ell~~aDiv~~~lp~  183 (303)
T PRK06436        121 YNKSLGILGY-GGIGRRVALLAKAFGM--NIYAYTRSYVN--------DG--IS-SI---YMEPEDIMKKSDFVLISLPL  183 (303)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcc--------cC--cc-cc---cCCHHHHHhhCCEEEECCCC
Confidence            3469999999 9999999987776677  99999975311        00  00 01   13578889999999997421


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                      .  +.         +-.++.  .+.+....|++++|+++  .++|.-
T Consensus       184 t--~~---------T~~li~--~~~l~~mk~ga~lIN~sRG~~vd~~  217 (303)
T PRK06436        184 T--DE---------TRGMIN--SKMLSLFRKGLAIINVARADVVDKN  217 (303)
T ss_pred             C--ch---------hhcCcC--HHHHhcCCCCeEEEECCCccccCHH
Confidence            1  11         111111  23333345789999987  666654

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.54  E-value=1.9  Score=39.64  Aligned_cols=34  Identities=15%  Similarity=0.037  Sum_probs=29.0

Q ss_pred             CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +.+.|+||+  +-+|..++..|++.|.  +|++.|+++
T Consensus        11 k~~lItGas~g~GIG~a~a~~la~~G~--~v~l~~r~~   46 (258)
T PRK07533         11 KRGLVVGIANEQSIAWGCARAFRALGA--ELAVTYLND   46 (258)
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCh
Confidence            478889986  3799999999999987  899999875

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.53  E-value=0.19  Score=43.59  Aligned_cols=55  Identities=27%  Similarity=0.465  Sum_probs=40.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|+|.+..||..++.+|...+.  .+.+.+.+                       |.++++.++.||+||.++|.|
T Consensus        36 Gk~v~VvGrs~~VG~Pla~lL~~~~a--tVt~~h~~-----------------------T~~l~~~~~~ADIVVsa~G~~   90 (160)
T PF02882_consen   36 GKKVVVVGRSNIVGKPLAMLLLNKGA--TVTICHSK-----------------------TKNLQEITRRADIVVSAVGKP   90 (160)
T ss_dssp             T-EEEEE-TTTTTHHHHHHHHHHTT---EEEEE-TT-----------------------SSSHHHHHTTSSEEEE-SSST
T ss_pred             CCEEEEECCcCCCChHHHHHHHhCCC--eEEeccCC-----------------------CCcccceeeeccEEeeeeccc
Confidence            45899999977899999999988865  66665542                       246678889999999998866

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=94.50  E-value=0.2  Score=44.06  Aligned_cols=123  Identities=21%  Similarity=0.193  Sum_probs=74.3

Q ss_pred             CCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEE----
Q 018618           20 PPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVR----   95 (353)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~----   95 (353)
                      -||||-- |||++.         ..-|+||+|.+|+.+...+.+.+.++.++++-++++       -+..+...+.    
T Consensus         7 lsklrED-f~mq~~---------s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~-------~d~at~k~v~q~~v   69 (238)
T KOG4039|consen    7 LSKLRED-FRMQNM---------SGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL-------PDPATDKVVAQVEV   69 (238)
T ss_pred             hhHHHHH-Hhhhcc---------ceEEEeccccccHHHHHHHHhcccceeEEEEEeccC-------CCccccceeeeEEe
Confidence            3677776 888765         455999999999999999999999999999988751       1111111111    


Q ss_pred             EEeCCCchhhhhCCCcEEEEcCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618           96 GFLGQPQLENALTGMDLVIIPAGVPR-KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus        96 ~~~~t~d~~~al~~ADiVIi~ag~~~-~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      .+.--.++..++.+-|+.+.+-|.-| +.|-+..  ....-+.+.+.++..++.+=+.++++.|--.
T Consensus        70 Df~Kl~~~a~~~qg~dV~FcaLgTTRgkaGadgf--ykvDhDyvl~~A~~AKe~Gck~fvLvSS~GA  134 (238)
T KOG4039|consen   70 DFSKLSQLATNEQGPDVLFCALGTTRGKAGADGF--YKVDHDYVLQLAQAAKEKGCKTFVLVSSAGA  134 (238)
T ss_pred             chHHHHHHHhhhcCCceEEEeecccccccccCce--EeechHHHHHHHHHHHhCCCeEEEEEeccCC
Confidence            11111345677899999998755433 3332211  1111233445555555555455666655433

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.43  E-value=0.27  Score=49.37  Aligned_cols=123  Identities=24%  Similarity=0.311  Sum_probs=70.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH---HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~---~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .++|.|+|+ |.+|..+|..|+..|.  +|+++|.+...   ....++...    .++.+... ...+...++|+||.++
T Consensus         5 ~k~v~iiG~-g~~G~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~-~~~~~~~~~d~vv~~~   76 (450)
T PRK14106          5 GKKVLVVGA-GVSGLALAKFLKKLGA--KVILTDEKEEDQLKEALEELGEL----GIELVLGE-YPEEFLEGVDLVVVSP   76 (450)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc----CCEEEeCC-cchhHhhcCCEEEECC
Confidence            358999999 7799999999999998  99999997522   112233321    12222111 1124457899999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC--CchhHHHHHHHHH
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV--NSTVPIAAEVFKK  174 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv--~~~t~~~~~~~~~  174 (353)
                      |.+...- .....-..+++++.......+.. + ..+|-+|=..  ...+.+++.++..
T Consensus        77 g~~~~~~-~~~~a~~~~i~~~~~~~~~~~~~-~-~~vI~ITGS~GKTTt~~~l~~iL~~  132 (450)
T PRK14106         77 GVPLDSP-PVVQAHKKGIEVIGEVELAYRFS-K-APIVAITGTNGKTTTTTLLGEIFKN  132 (450)
T ss_pred             CCCCCCH-HHHHHHHCCCcEEeHHHHHHhhc-C-CCEEEEeCCCchHHHHHHHHHHHHH
Confidence            8642111 11111234566665555433322 2 3455665433  3555566565544

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.40  E-value=0.25  Score=39.31  Aligned_cols=63  Identities=19%  Similarity=0.187  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+|.|||+ |.+|..-+..|+..|-  +|.++....   ..  .+.   ...+..    ..+++.+.++|+|+.+.+
T Consensus         7 ~~~vlVvGg-G~va~~k~~~Ll~~gA--~v~vis~~~---~~--~~~---~i~~~~----~~~~~~l~~~~lV~~at~   69 (103)
T PF13241_consen    7 GKRVLVVGG-GPVAARKARLLLEAGA--KVTVISPEI---EF--SEG---LIQLIR----REFEEDLDGADLVFAATD   69 (103)
T ss_dssp             T-EEEEEEE-SHHHHHHHHHHCCCTB--EEEEEESSE---HH--HHT---SCEEEE----SS-GGGCTTESEEEE-SS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEECCch---hh--hhh---HHHHHh----hhHHHHHhhheEEEecCC
Confidence            459999999 9999999999999885  999999863   11  111   112221    245577999999998753

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=94.39  E-value=0.16  Score=50.09  Aligned_cols=61  Identities=18%  Similarity=0.233  Sum_probs=45.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||. |.||+.++..+..-|.  ++..+|.....      .. .   ...    ..++++.++.||+|++..
T Consensus       115 ~gktvGIIG~-G~IG~~vA~~l~a~G~--~V~~~dp~~~~------~~-~---~~~----~~~L~ell~~sDiI~lh~  175 (378)
T PRK15438        115 HDRTVGIVGV-GNVGRRLQARLEALGI--KTLLCDPPRAD------RG-D---EGD----FRSLDELVQEADILTFHT  175 (378)
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCcccc------cc-c---ccc----cCCHHHHHhhCCEEEEeC
Confidence            4569999999 9999999999987787  99999964211      00 0   011    135788899999999864

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.38  E-value=4.2  Score=37.51  Aligned_cols=35  Identities=26%  Similarity=0.238  Sum_probs=28.6

Q ss_pred             CCeEEEEcC--CCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa--~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+.+.|+||  ++-+|..++..|++.|.  +|++.++++
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~--~v~~~~~~~   42 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGA--ELAFTYVVD   42 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCcH
Confidence            347899996  45899999999999988  888887644

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=94.36  E-value=0.13  Score=51.45  Aligned_cols=74  Identities=19%  Similarity=0.183  Sum_probs=50.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ...||.|+|+ |.+|..++..|...|. .+|.+++++..++  ..|...-.......   -.++.+.+.+||+||.+.+.
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~-~~I~V~nRt~~ra--~~La~~~~~~~~~~---~~~l~~~l~~aDiVI~aT~a  252 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAP-KQIMLANRTIEKA--QKITSAFRNASAHY---LSELPQLIKKADIIIAAVNV  252 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCC-CEEEEECCCHHHH--HHHHHHhcCCeEec---HHHHHHHhccCCEEEECcCC
Confidence            4468999999 9999999999988775 3899999875222  22322110011221   14566889999999998776


Q ss_pred             C
Q 018618          120 P  120 (353)
Q Consensus       120 ~  120 (353)
                      |
T Consensus       253 ~  253 (414)
T PRK13940        253 L  253 (414)
T ss_pred             C
Confidence            5

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=94.36  E-value=0.1  Score=45.26  Aligned_cols=66  Identities=21%  Similarity=0.298  Sum_probs=42.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      .++++|+|- |.+|..+|..|...|.  .|..+|+++.+.... ..+.   -.+.      +++++++.+|++|.+.|.
T Consensus        23 Gk~vvV~GY-G~vG~g~A~~lr~~Ga--~V~V~e~DPi~alqA-~~dG---f~v~------~~~~a~~~adi~vtaTG~   88 (162)
T PF00670_consen   23 GKRVVVIGY-GKVGKGIARALRGLGA--RVTVTEIDPIRALQA-AMDG---FEVM------TLEEALRDADIFVTATGN   88 (162)
T ss_dssp             TSEEEEE---SHHHHHHHHHHHHTT---EEEEE-SSHHHHHHH-HHTT----EEE-------HHHHTTT-SEEEE-SSS
T ss_pred             CCEEEEeCC-CcccHHHHHHHhhCCC--EEEEEECChHHHHHh-hhcC---cEec------CHHHHHhhCCEEEECCCC
Confidence            357999999 9999999999998887  999999987433211 1221   1222      357899999999987653

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=94.36  E-value=0.15  Score=50.39  Aligned_cols=61  Identities=21%  Similarity=0.245  Sum_probs=45.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||. |.||+.++..+..-|.  +++.+|.....   .  ..     ... +   .++++.++.||+|++..
T Consensus       115 ~gktvGIIG~-G~IG~~va~~l~a~G~--~V~~~Dp~~~~---~--~~-----~~~-~---~~l~ell~~aDiV~lh~  175 (381)
T PRK00257        115 AERTYGVVGA-GHVGGRLVRVLRGLGW--KVLVCDPPRQE---A--EG-----DGD-F---VSLERILEECDVISLHT  175 (381)
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCcccc---c--cc-----Ccc-c---cCHHHHHhhCCEEEEeC
Confidence            3468999999 9999999999988787  99999975311   0  00     011 1   25778889999999974

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=94.36  E-value=0.26  Score=46.71  Aligned_cols=75  Identities=20%  Similarity=0.280  Sum_probs=47.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +.+++.|+|| |-.|.++++.|+..|. .+|.++|++.  ++.++.++........+... ...++++.+.++|+||.+.
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~-~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~-~~~~~~~~~~~~divINaT  202 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGV-QKLQVADLDTSRAQALADVINNAVGREAVVGV-DARGIEDVIAAADGVVNAT  202 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCC-CEEEEEcCCHHHHHHHHHHHhhccCcceEEec-CHhHHHHHHhhcCEEEEcC
Confidence            3468999999 9999999999988775 4899999876  33333333221111112221 1112234567899999975

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.33  E-value=0.074  Score=51.89  Aligned_cols=71  Identities=24%  Similarity=0.506  Sum_probs=47.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-C-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .+||+|+||+|.+|..+...|...+ + ..+|.++......|....+..    ..+...  ..|. +.+.++|+|+++++
T Consensus         5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~----~~l~v~--~~~~-~~~~~~Divf~a~~   77 (347)
T PRK06728          5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKG----REIIIQ--EAKI-NSFEGVDIAFFSAG   77 (347)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCC----cceEEE--eCCH-HHhcCCCEEEECCC
Confidence            4699999999999999999998554 3 356888876553333332221    123332  1243 56789999999764

>TIGR03736 PRTRC_ThiF PRTRC system ThiF family protein

Probab=94.30  E-value=0.29  Score=45.38  Aligned_cols=35  Identities=23%  Similarity=0.302  Sum_probs=29.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC---------CcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL---------VSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~---------~~el~L~D~~~   77 (353)
                      .||.|||+ |-+|+.++..|+..|+         ..+|+++|.+.
T Consensus        12 ~~V~vvG~-GGlGs~v~~~Lar~G~a~~~~G~~~g~~i~lvD~D~   55 (244)
T TIGR03736        12 VSVVLVGA-GGTGSQVIAGLARLHHALKALGHPGGLAVTVYDDDT   55 (244)
T ss_pred             CeEEEEcC-ChHHHHHHHHHHHccccccccCCCCCCEEEEECCCE
Confidence            39999999 9999999999988642         12999999764

A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This family is the PRTRC system ThiF family protein.

>PLN02306 hydroxypyruvate reductase

Probab=94.28  E-value=0.28  Score=48.64  Aligned_cols=101  Identities=20%  Similarity=0.244  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHH-hCCCCcEEEEEeCCCcHHHH---HHHhc---CCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVT---ADISH---MDTGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~-~~~~~~el~L~D~~~~~~~~---~dl~~---~~~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      .++|+|+|. |.+|+.+|..+. .-|.  +|..||........   ..+..   .......... ...++++.++.||+|
T Consensus       165 gktvGIiG~-G~IG~~vA~~l~~~fGm--~V~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~L~ell~~sDiV  240 (386)
T PLN02306        165 GQTVGVIGA-GRIGSAYARMMVEGFKM--NLIYYDLYQSTRLEKFVTAYGQFLKANGEQPVTWK-RASSMEEVLREADVI  240 (386)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCC--EEEEECCCCchhhhhhhhhhccccccccccccccc-ccCCHHHHHhhCCEE
Confidence            469999999 999999999875 4455  99999976421111   01110   0000011111 124788999999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ++....  .+         ++-.++..  +.+...-|++++|+++
T Consensus       241 ~lh~Pl--t~---------~T~~lin~--~~l~~MK~ga~lIN~a  272 (386)
T PLN02306        241 SLHPVL--DK---------TTYHLINK--ERLALMKKEAVLVNAS  272 (386)
T ss_pred             EEeCCC--Ch---------hhhhhcCH--HHHHhCCCCeEEEECC
Confidence            996421  11         11111111  2333344789999987

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=94.28  E-value=0.12  Score=50.50  Aligned_cols=34  Identities=32%  Similarity=0.379  Sum_probs=26.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEE-EEEeC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVL-HLYDV   75 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el-~L~D~   75 (353)
                      ++||+|+||+|.+|..++..|...+.. ++ .+.|.
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~-elv~v~~~   36 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEV-EIVAVTSR   36 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCc-eEEEEECc
Confidence            469999999999999999988876544 55 55663

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=94.23  E-value=0.62  Score=42.04  Aligned_cols=32  Identities=19%  Similarity=0.325  Sum_probs=26.8

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVV   76 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~   76 (353)
                      .+.|+||+|++|++++..|++.|.  ++++. +.+
T Consensus         3 ~~lItGa~g~iG~~l~~~l~~~g~--~v~~~~~~~   35 (247)
T PRK09730          3 IALVTGGSRGIGRATALLLAQEGY--TVAVNYQQN   35 (247)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCC
Confidence            689999999999999999998887  77664 443

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=94.22  E-value=0.6  Score=39.48  Aligned_cols=115  Identities=18%  Similarity=0.173  Sum_probs=71.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeC-CCch----------hhhh
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLG-QPQL----------ENAL  107 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~-t~d~----------~~al  107 (353)
                      .+.|+||+|.+|..++..|++.|. ..+++++.++    ......++....  ..+..+.. .++.          .+..
T Consensus         2 ~~lItGa~~giG~~~a~~l~~~g~-~~v~~~~r~~~~~~~~~l~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    2 TVLITGASSGIGRALARALARRGA-RVVILTSRSEDSEGAQELIQELKAPG--AKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTT-EEEEEEESSCHHHHHHHHHHHHHHTT--SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCc-eEEEEeeecccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence            588999999999999999998843 2788888872    223333444222  33333211 1111          1234


Q ss_pred             CCCcEEEEcCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          108 TGMDLVIIPAGVPRKPG---M---TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      ..-|++|..+|......   +   .....+..|+.....+.+.+.. .+.+.++++|...
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~g~iv~~sS~~  137 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP-QGGGKIVNISSIA  137 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-HTTEEEEEEEEGG
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeeehhee-ccccceEEecchh
Confidence            58899999988765211   1   1234566777666677777766 4577777776543

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.18  E-value=0.14  Score=48.65  Aligned_cols=76  Identities=18%  Similarity=0.326  Sum_probs=50.8

Q ss_pred             CCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe
Q 018618           19 YPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL   98 (353)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~   98 (353)
                      +-||.-.++.+.-..... ..+..+|+|+|++|.+|..++..|...+.  +|.+++..                      
T Consensus       138 ~~p~T~~gii~~L~~~~i-~l~Gk~vvViG~gg~vGkpia~~L~~~ga--tVtv~~~~----------------------  192 (283)
T PRK14192        138 YGSATPAGIMRLLKAYNI-ELAGKHAVVVGRSAILGKPMAMMLLNANA--TVTICHSR----------------------  192 (283)
T ss_pred             ccCCcHHHHHHHHHHcCC-CCCCCEEEEECCcHHHHHHHHHHHHhCCC--EEEEEeCC----------------------
Confidence            334444444443222211 23346999999944599999999988876  88888741                      


Q ss_pred             CCCchhhhhCCCcEEEEcCCCC
Q 018618           99 GQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        99 ~t~d~~~al~~ADiVIi~ag~~  120 (353)
                       +.++.+.+++||+||.+.|.|
T Consensus       193 -t~~L~~~~~~aDIvI~AtG~~  213 (283)
T PRK14192        193 -TQNLPELVKQADIIVGAVGKP  213 (283)
T ss_pred             -chhHHHHhccCCEEEEccCCC
Confidence             134556779999999998644

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.17  E-value=0.28  Score=47.50  Aligned_cols=91  Identities=22%  Similarity=0.272  Sum_probs=57.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++++|+|. |.+|+.+|..+.  ++.-+|+.+|+.+. ....+...      .+.    .++++.++.||+|++.+..-
T Consensus       146 gktvGIiG~-GrIG~avA~r~~--~Fgm~v~y~~~~~~-~~~~~~~~------~~y----~~l~ell~~sDii~l~~Plt  211 (324)
T COG1052         146 GKTLGIIGL-GRIGQAVARRLK--GFGMKVLYYDRSPN-PEAEKELG------ARY----VDLDELLAESDIISLHCPLT  211 (324)
T ss_pred             CCEEEEECC-CHHHHHHHHHHh--cCCCEEEEECCCCC-hHHHhhcC------cee----ccHHHHHHhCCEEEEeCCCC
Confidence            469999999 999999999998  54449999998763 11111111      111    13678899999999975321


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                                 .+|-.++.  .+.+.+..|++++||.+
T Consensus       212 -----------~~T~hLin--~~~l~~mk~ga~lVNta  236 (324)
T COG1052         212 -----------PETRHLIN--AEELAKMKPGAILVNTA  236 (324)
T ss_pred             -----------hHHhhhcC--HHHHHhCCCCeEEEECC
Confidence                       11111111  12334445789998886

>PRK06046 alanine dehydrogenase; Validated

Probab=94.17  E-value=0.21  Score=48.38  Aligned_cols=71  Identities=18%  Similarity=0.254  Sum_probs=49.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..+|+|||+ |..|...+..+.....+.++.++|++.  .+..+.++.+. ....+...   ++++++++ +|+|+++.
T Consensus       129 ~~~vgiiG~-G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~-~~~~v~~~---~~~~~~l~-aDiVv~aT  201 (326)
T PRK06046        129 SKVVGIIGA-GNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSV-VGCDVTVA---EDIEEACD-CDILVTTT  201 (326)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhh-cCceEEEe---CCHHHHhh-CCEEEEec
Confidence            348999999 999998888777555567999999987  33334444422 12234432   46778887 99999974

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	353
1sev_A	362	Mature And Translocatable Forms Of Glyoxysomal Mala		1e-171
1smk_A	326	Mature And Translocatable Forms Of Glyoxysomal Mala		1e-160
1mld_A	314	Refined Structure Of Mitochondrial Malate Dehydroge		2e-93
2dfd_A	342	Crystal Structure Of Human Malate Dehydrogenase Typ		1e-92
2pwz_A	312	Crystal Structure Of The Apo Form Of E.Coli Malate		2e-80
1emd_A	312	Crystal Structure Of A Ternary Complex Of Escherich		2e-80
1ib6_A	312	Crystal Structure Of R153c E. Coli Malate Dehydroge		2e-79
4e0b_A	313	2.17 Angstrom Resolution Crystal Structure Of Malat		8e-79
3p7m_A	321	Structure Of Putative Lactate Dehydrogenase From Fr		3e-19
1gv1_A	310	Structural Basis For Thermophilic Protein Stability		4e-17
1guz_A	310	Structural Basis For Thermophilic Protein Stability		5e-17
3tl2_A	315	Crystal Structure Of Bacillus Anthracis Str. Ames M		2e-16
3gvh_A	324	Crystal Structure Of LactateMALATE DEHYDROGENASE FR		2e-16
1gv0_A	310	Structural Basis For Thermophilic Protein Stability		9e-15
1uxi_A	309	Large Improvement In The Thermal Stability Of A Tet		1e-14
1uxh_A	309	Large Improvement In The Thermal Stability Of A Tet		1e-14
2hjr_A	328	Crystal Structure Of Cryptosporidium Parvum Malate		2e-14
1guy_A	309	Structural Basis For Thermophilic Protein Stability		2e-14
1ur5_A	309	Stabilization Of A Tetrameric Malate Dehydrogenase		4e-14
3om9_A	329	T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex		4e-12
1pze_A	331	T.gondii Ldh1 Apo Form Length = 331		5e-12
1pzg_A	331	T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.		5e-12
3czm_A	326	T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex		9e-12
1sov_A	328	Toxoplasma Gondii Bradyzoite-specific Ldh (ldh2) Ap		1e-11
1a5z_A	319	Lactate Dehydrogenase From Thermotoga Maritima (tml		2e-11
1u4o_A	321	Plasmodium Falciparum Lactate Dehydrogenase Complex		2e-11
1t24_A	322	Plasmodium Falciparum Lactate Dehydrogenase Complex		2e-11
1xiv_A	323	Plasmodium Falciparum Lactate Dehydrogenase Complex		3e-11
1ceq_A	316	Chloroquine Binds In The Cofactor Binding Site Of P		3e-11
2d4a_A	308	Structure Of The Malate Dehydrogenase From Aeropyru		6e-11
3fi9_A	343	Crystal Structure Of Malate Dehydrogenase From Porp		6e-11
1hlp_A	303	Structural Features Stabilizing Halophilic Malate D		8e-11
2hlp_A	303	Crystal Structure Of The E267r Mutant Of A Halophil		8e-11
2j5k_A	304	2.0 A Resolution Structure Of The Wild Type Malate		9e-11
3nep_X	314	1.55a Resolution Structure Of Malate Dehydrogenase		1e-10
2a92_A	321	Crystal Structure Of Lactate Dehydrogenase From Pla		1e-10
1y6j_A	318	L-Lactate Dehydrogenase From Clostridium Thermocell		2e-10
2ewd_A	317	Crystal Structure Of The Lactate Dehydrogenase From		3e-10
1hyg_A	313	Crystal Structure Of Mj0490 Gene Product, The Famil		3e-10
2fm3_A	321	Crystal Structure Of The Lactate Dehydrogenase From		4e-10
1cet_A	316	Chloroquine Binds In The Cofactor Binding Site Of P		5e-10
1oc4_A	322	Lactate Dehydrogenase From Plasmodium Berghei Lengt		6e-10
2x0r_A	304	R207s,R292s Mutant Of Malate Dehydrogenase From The		1e-09
1o6z_A	303	1.95 A Resolution Structure Of (r207s,r292s) Mutant		1e-09
1t2e_A	322	Plasmodium Falciparum Lactate Dehydrogenase S245a,		2e-09
2x0i_A	294	2.9 A Resolution Structure Of Malate Dehydrogenase		2e-08
4h7p_A	345	Crystal Structure Of A Putative Cytosolic Malate De		3e-07
1llc_A	325	Structure Determination Of The Allosteric L-Lactate		2e-06
2zqy_A	326	T-State Structure Of Allosteric L-Lactate Dehydroge		2e-06
3vku_A	326	Penta Mutant Of Lactobacillus Casei Lactate Dehydro		4e-06
2ldx_A	331	Characterization Of The Antigenic Sites On The Refi		6e-06
2v6b_A	304	Crystal Structure Of Lactate Dehydrogenase From Dei		1e-05
1bmd_A	327	Determinants Of Protein Thermostability Observed In		2e-05
3h3f_A	331	Rabbit Muscle L-Lactate Dehydrogenase In Complex Wi		2e-05
1bdm_A	327	The Structure At 1.8 Angstroms Resolution Of A Sing		2e-05
1lld_A	319	Molecular Basis Of Allosteric Activation Of Bacteri		2e-05
1iz9_A	327	Crystal Structure Of Malate Dehydrogenase From Ther		3e-05
1i10_A	331	Human Muscle L-Lactate Dehydrogenase M Chain, Terna		3e-05
4ajp_A	337	Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-		3e-05
1ldn_A	316	Structure Of A Ternary Complex Of An Allosteric Lac		3e-05
1ldb_A	317	Structure Determination And Refinement Of Bacillus		3e-05
1wze_A	327	Structural Basis For Alteration Of Cofactor Specifi		7e-05
2e37_A	310	Structure Of Tt0471 Protein From Thermus Thermophil		8e-05
4a73_A	310	Single Point Mutant Of Thermus Thermophilus Lactate		9e-05
2v6m_A	310	Crystal Structure Of Lactate Dehydrogenase From The		9e-05
9ldt_A	332	Design And Synthesis Of New Enzymes Based On The La		1e-04
4aj4_A	332	Rat Ldha In Complex With 4-((2-Allylsulfanyl-1,3-Be		1e-04
4aj1_A	331	Rat Ldha In Complex With N-(2-(Methylamino)-1,3- Be		1e-04
2xxb_A	310	Penta-Mutant Of Thermus Thermophilus Lactate Dehydr		3e-04
3pqd_A	326	Crystal Structure Of L-Lactate Dehydrogenase From B		4e-04
3pqe_A	326	Crystal Structure Of L-Lactate Dehydrogenase From B		4e-04
1civ_A	385	Chloroplast Nadp-Dependent Malate Dehydrogenase Fro		7e-04

>pdb|1SEV|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures Length = 362

Iteration: 1
 Score =  597 bits (1538), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 296/355 (83%), Positives = 314/355 (88%), Gaps = 3/355 (0%)
Query: 1   MEFSSEANQRIARISAHLYPPNLQ---NSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPL 57
           M+   + NQRIARISAHL+PP  Q   +S LR+A CRAKGGA GFKVAILGAAGGIGQPL
Sbjct: 1   MQPIPDVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPL 60
Query: 58  AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA 117
           AMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PA
Sbjct: 61  AMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPA 120
Query: 118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT 177
           GVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A VNLISNPVNSTVPIAAEVFKKAGT
Sbjct: 121 GVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGT 180
Query: 178 YDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCSFTQ 237
           YDPK+LLGVTMLDVVRANTFVAE                HAGVTILPLLSQVKPP SFTQ
Sbjct: 181 YDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPSSFTQ 240
Query: 238 EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
           EE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGV+ECAFV+S
Sbjct: 241 EEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVIECAFVSS 300
Query: 298 QVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 352
           QVTELPFFASKVRLGR G EE++ LGPLNEYERIGLEKAKKELAGSI+KG+SF +
Sbjct: 301 QVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR 355

>pdb|1SMK|A Chain A, Mature And Translocatable Forms Of Glyoxysomal Malate Dehydrogenase Have Different Activities And Stabilities But Similar Crystal Structures Length = 326

Iteration: 1
 Score =  559 bits (1441), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/319 (86%), Positives = 289/319 (90%)
Query: 34  RAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV 93
           RAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAV
Sbjct: 1   RAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV 60
Query: 94  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 153
           VRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A 
Sbjct: 61  VRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 120
Query: 154 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXX 213
           VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAE             
Sbjct: 121 VNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 180
Query: 214 XXXHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV 273
              HAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV
Sbjct: 181 VGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAV 240
Query: 274 KFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL 333
           KFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ LGPLNEYERIGL
Sbjct: 241 KFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGL 300
Query: 334 EKAKKELAGSIQKGISFSK 352
           EKAKKELAGSI+KG+SF +
Sbjct: 301 EKAKKELAGSIEKGVSFIR 319

>pdb|1MLD|A Chain A, Refined Structure Of Mitochondrial Malate Dehydrogenase From Porcine Heart And The Consensus Structure For Dicarboxylic Acid Oxidoreductases Length = 314

Iteration: 1
 Score =  338 bits (868), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 170/310 (54%), Positives = 219/310 (70%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61
Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct: 62  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121
Query: 163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 222
           ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE                HAG TI
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 181
Query: 223 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282
           +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct: 182 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 241
Query: 283 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342
           + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E   + +A  EL  
Sbjct: 242 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 301
Query: 343 SIQKGISFSK 352
           SI+KG  F K
Sbjct: 302 SIKKGEEFVK 311

>pdb|2DFD|A Chain A, Crystal Structure Of Human Malate Dehydrogenase Type 2 Length = 342

Iteration: 1
 Score =  336 bits (862), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 170/310 (54%), Positives = 217/310 (70%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 30  KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPEQ 89
Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP A + +I+NPVN
Sbjct: 90  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMICVIANPVN 149
Query: 163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI 222
           ST+PI AEVFKK G Y+P K+ GVT LD+VRANTFVAE                HAG TI
Sbjct: 150 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANTFVAELKGLDPARVNVPVIGGHAGKTI 209
Query: 223 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282
           +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct: 210 IPLISQCTPKVDFPQDQLTALTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 269
Query: 283 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342
           + G  GVVEC+FV SQ TE  +F++ + LG++G E+   +G ++ +E   +  A  EL  
Sbjct: 270 MNGKEGVVECSFVKSQETECTYFSTPLLLGKKGIEKNLGIGKVSSFEEKMISDAIPELKA 329
Query: 343 SIQKGISFSK 352
           SI+KG  F K
Sbjct: 330 SIKKGEDFVK 339

>pdb|2PWZ|A Chain A, Crystal Structure Of The Apo Form Of E.Coli Malate Dehydrogenase Length = 312

Iteration: 1
 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/314 (52%), Positives = 203/314 (64%), Gaps = 4/314 (1%)
Query: 42  FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG 99
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG 60
Query: 100 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159
           +     AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+N
Sbjct: 61  E-DATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119
Query: 160 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 219
           PVN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE                H+G
Sbjct: 120 PVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 220 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 279
           VTILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + 
Sbjct: 180 VTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238
Query: 280 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE 339
           +R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E+  LE     
Sbjct: 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDT 298
Query: 340 LAGSIQKGISFSKK 353
           L   I  G  F  K
Sbjct: 299 LKKDIALGEEFVNK 312

>pdb|1EMD|A Chain A, Crystal Structure Of A Ternary Complex Of Escherichia Coli Malate Dehydrogenase, Citrate And Nad At 1.9 Angstroms Resolution Length = 312

Iteration: 1
 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 165/314 (52%), Positives = 203/314 (64%), Gaps = 4/314 (1%)
Query: 42  FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG 99
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG 60
Query: 100 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159
           +     AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+N
Sbjct: 61  E-DATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119
Query: 160 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 219
           PVN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE                H+G
Sbjct: 120 PVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 220 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 279
           VTILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + 
Sbjct: 180 VTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238
Query: 280 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE 339
           +R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E+  LE     
Sbjct: 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDT 298
Query: 340 LAGSIQKGISFSKK 353
           L   I  G  F  K
Sbjct: 299 LKKDIALGQEFVNK 312

>pdb|1IB6|A Chain A, Crystal Structure Of R153c E. Coli Malate Dehydrogenase Length = 312

Iteration: 1
 Score =  292 bits (747), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 164/314 (52%), Positives = 202/314 (64%), Gaps = 4/314 (1%)
Query: 42  FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLG 99
            KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G
Sbjct: 1   MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG 60
Query: 100 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159
           +     AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+N
Sbjct: 61  E-DATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119
Query: 160 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 219
           PVN+TV IAAEV KKAG YD  KL GVT LD++ +NTFVAE                H+G
Sbjct: 120 PVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIICSNTFVAELKGKQPGEVEVPVIGGHSG 179
Query: 220 VTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADAC 279
           VTILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + 
Sbjct: 180 VTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSL 238
Query: 280 LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE 339
           +R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E+  LE     
Sbjct: 239 VRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDT 298
Query: 340 LAGSIQKGISFSKK 353
           L   I  G  F  K
Sbjct: 299 LKKDIALGQEFVNK 312

>pdb|4E0B|A Chain A, 2.17 Angstrom Resolution Crystal Structure Of Malate Dehydrogenase From Vibrio Vulnificus Cmcp6 Length = 313

Iteration: 1
 Score =  290 bits (742), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 163/312 (52%), Positives = 206/312 (66%), Gaps = 5/312 (1%)
Query: 43  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 100
           KVA++GAAGGIGQ LA+L+K   P  S L LYD+   TPGV AD+SH+ T   ++G+ G+
Sbjct: 5   KVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTHVSIKGYAGE 64
Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
                AL G D+V+I AGV RKPG  R DLFN+NAGIV++L E IA  CPNA + +I+NP
Sbjct: 65  DPTP-ALEGADVVLISAGVARKPGXDRADLFNVNAGIVKSLAERIAVVCPNACIGIITNP 123
Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGV 220
           VN+TVPIAAEV KKAG YD +KL GVT LDV+R+ TFVAE                H+GV
Sbjct: 124 VNTTVPIAAEVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKGQDPGEVRVPVIGGHSGV 183
Query: 221 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 280
           TILPLLSQV+    F+ EE   LT RIQN GTEVVEAKAG GSATLS   AA +F  A +
Sbjct: 184 TILPLLSQVE-GVEFSDEEIAALTKRIQNAGTEVVEAKAGGGSATLSXGQAACRFGLALV 242
Query: 281 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 340
           + L+G+  V+E A+V        FFA  V+LG++G EEI   G L+++E+  L+   + L
Sbjct: 243 KALQGEE-VIEYAYVEGNGEHASFFAQPVKLGKEGVEEILPYGELSDFEKAALDGXLETL 301
Query: 341 AGSIQKGISFSK 352
              IQ G+ F K
Sbjct: 302 NSDIQIGVDFVK 313

>pdb|3P7M|A Chain A, Structure Of Putative Lactate Dehydrogenase From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 321

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 149/325 (45%), Gaps = 43/325 (13%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV------VRG 96
           K+ ++GA G IG  LA L  I  L  V+ L+D+         +  + T  +      VRG
Sbjct: 7   KITLVGA-GNIGGTLAHLALIKQLGDVV-LFDIAQGXPNGKALDLLQTCPIEGVDFKVRG 64
Query: 97  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
                 LEN+    D+VI+ AGVPRKPG +RDDL  IN  + +T+ EGI   CPNA V  
Sbjct: 65  TNDYKDLENS----DVVIVTAGVPRKPGXSRDDLLGINIKVXQTVGEGIKHNCPNAFVIC 120
Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXX 216
           I+NP++  V     + K +G  D K +    +LD  R  TF+A+                
Sbjct: 121 ITNPLDIXV---NXLQKFSGVPDNKIVGXAGVLDSARFRTFLADELNVSVQQVQAYVXGG 177
Query: 217 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266
           H G T +PL          L Q+       QE  + + +R ++GG E+V A    GSA  
Sbjct: 178 H-GDTXVPLTKXSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIV-ALLKTGSAYY 235
Query: 267 SMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLN 326
           + A A ++ A++ L+  +    ++ C             A+KV+ G  G +E   +G   
Sbjct: 236 APAAAGIQXAESFLKDKK---XILPC-------------AAKVKAGXYGLDEDLFVGVPT 279
Query: 327 EYERIGLEKAKKELAGSIQKGISFS 351
           E    G+   + E++   ++ +  S
Sbjct: 280 EISANGVRPIEVEISDKEREQLQVS 304

>pdb|1GV1|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 145/322 (45%), Gaps = 51/322 (15%)
Query: 42  FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP 101
            K+ ++GA G +G   A  +    L   L L DVV        +   +TG V  G     
Sbjct: 1   MKITVIGA-GNVGATTAFRIADKKLARELVLLDVVEGIPQGKGLDMYETGPV--GLF--- 54
Query: 102 QLENALTGM---------DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 152
             +  +TG          D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N 
Sbjct: 55  --DTKITGSNDYADTADSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNP 112
Query: 153 TVNLISNPVNSTVPIAAEVFKKAGTYDPK-KLLGVT-MLDVVRANTFVAEXXXXXXXXXX 210
            + ++SNP++    +A   + ++G   PK +++G+  +LD  R  +F+A           
Sbjct: 113 IIIVVSNPLDIMTHVA---WVRSGL--PKERVIGMAGVLDAARFRSFIAMELGVSMQDIN 167
Query: 211 XXXXXXH--AGVTILPLLSQVKPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266
                 H  A V ++   +    P S     E  + L  R +NGG E+VE     GSA  
Sbjct: 168 ACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVE-HLKQGSAFY 226
Query: 267 SMAYAAVKFADA----------CLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 316
           + A + V+  ++          C  GL G  G+           +  F    V+LGR G 
Sbjct: 227 APASSVVEMVESIVLDRKRVLPCAVGLEGQYGI-----------DKTFVGVPVKLGRNGV 275
Query: 317 EEIFQLGPLNEYERIGLEKAKK 338
           E+I+++  L++ +   L+K+ K
Sbjct: 276 EQIYEIN-LDQADLDLLQKSAK 296

>pdb|1GUZ|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 34/244 (13%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N  + ++SNP++    +A  
Sbjct: 71  DIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA-- 128
Query: 171 VFKKAGTYDPK-KLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXH--AGVTILPLL 226
            + ++G   PK +++G+  +LD  R  +F+A                 H  A V ++   
Sbjct: 129 -WVRSGL--PKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYT 185
Query: 227 SQVKPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA------ 278
           +    P S     E  + L  R +NGG E+VE     GSA  + A + V+  ++      
Sbjct: 186 TVAGIPISDLLPAETIDKLVERTRNGGAEIVE-HLKQGSAFYAPASSVVEMVESIVLDRK 244
Query: 279 ----CLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE 334
               C  GL G  G+           +  F    V+LGR G E+I+++  L++ +   L+
Sbjct: 245 RVLPCAVGLEGQYGI-----------DKTFVGVPVKLGRNGVEQIYEIN-LDQADLDLLQ 292
Query: 335 KAKK 338
           K+ K
Sbjct: 293 KSAK 296

>pdb|3TL2|A Chain A, Crystal Structure Of Bacillus Anthracis Str. Ames Malate Dehydrogenase In Closed Conformation Length = 315

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 119/235 (50%), Gaps = 20/235 (8%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           D+V+I AG+ RKPGM+RDDL   N+ I++++   IAK  PNA + +++NPV++   +   
Sbjct: 80  DVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDA---MTYS 136
Query: 171 VFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 228
           VFK+AG +  ++++G + +LD  R  TF+A+                H G  ++PL+   
Sbjct: 137 VFKEAG-FPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFVLGGH-GDDMVPLVRYS 194
Query: 229 ----VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLR 284
               +       +E  E +  R + GG E+V    G GSA  + A + V+  +A L+  R
Sbjct: 195 YAGGIPLETLIPKERLEAIVERTRKGGGEIV-GLLGNGSAYYAPAASLVEMTEAILKDQR 253
Query: 285 G---DAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 336
                   +E  +  S +    +    V LG  G E+I +L  L + E+  L+++
Sbjct: 254 RVLPAIAYLEGEYGYSDL----YLGVPVILGGNGIEKIIELELLAD-EKEALDRS 303

>pdb|3GVH|A Chain A, Crystal Structure Of LactateMALATE DEHYDROGENASE FROM Brucella Melitensis Length = 324

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 39/327 (11%)
Query: 37  GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TP-GVTADISHMDTGAVV 94
           G  A  K+A++G+ G IG  LA L  +  L  V+ L+D+   TP G   DI+     + V
Sbjct: 3   GSMARNKIALIGS-GMIGGTLAHLAGLKELGDVV-LFDIAEGTPQGKGLDIAE---SSPV 57
Query: 95  RGFLGQPQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN 151
            GF  +    N   A+ G D+VI+ AGVPRKPGM+RDDL  IN  ++  +  GI K  P 
Sbjct: 58  DGFDAKFTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPE 117
Query: 152 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 210
           A V  I+NP+++ V       +K       K++G+  +LD  R   F++E          
Sbjct: 118 AFVICITNPLDAMV----WALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVT 173
Query: 211 XXXXXXHAGVTI----------LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAG 260
                 H    +          +PL   VK   + +Q++ + +  R ++GG E+V     
Sbjct: 174 VFVLGGHGDSMVPLARYSTVAGIPLPDLVKMGWT-SQDKLDKIIQRTRDGGAEIV-GLLK 231
Query: 261 AGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT-----ELPFFASKVRLGRQG 315
            GSA  + A +A++ A++ L+  +          VA+Q++     +  +      +G  G
Sbjct: 232 TGSAFYAPAASAIQMAESYLKDKK------RVLPVAAQLSGQYGVKDMYVGVPTVIGANG 285
Query: 316 AEEIFQLGPLNEYERIGLEKAKKELAG 342
            E I ++  L++ E+   +K+   +AG
Sbjct: 286 VERIIEI-DLDKDEKAQFDKSVASVAG 311

>pdb|1GV0|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 310

Iteration: 1
 Score = 77.8 bits (190), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 117/236 (49%), Gaps = 18/236 (7%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           D+V+I AG+PRKPGMTR+DL ++NAGIVR +   I +   N  + ++SNP++    +A  
Sbjct: 71  DIVVITAGLPRKPGMTREDLLSMNAGIVREVTGRIMEHSKNPIIVVVSNPLDIMTHVA-- 128
Query: 171 VFKKAGTYDPK-KLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXH--AGVTILPLL 226
            ++K+G   PK +++G+  +LD  R  +F+A                 H  A V ++   
Sbjct: 129 -WQKSGL--PKERVIGMAGVLDSARFRSFIAMELGVSMQDVTACVLGGHGDAMVPVVKYT 185
Query: 227 SQVKPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLR 284
           +    P +   + E    L  R + GG E+V      GSA  S A + V+  ++ +   +
Sbjct: 186 TVAGIPVADLISAERIAELVERTRTGGAEIVN-HLKQGSAFYSPATSVVEMVESIVLDRK 244
Query: 285 GDAGVVECA--FVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKK 338
               V+ CA         +  F    V+LG+ G E I+++  L++ +   L+K+ K
Sbjct: 245 ---RVLTCAVSLDGQYGIDGTFVGVPVKLGKNGVEHIYEI-KLDQSDLDLLQKSAK 296

>pdb|1UXI|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric Malate Dehydrogenase By Single Point Mutations At The Dimer-Dimer Interface Length = 309

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 171 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 228
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFST 187
Query: 229 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 285
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 286 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 343
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E   L  + K +  +
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRAT 302
Query: 344 IQ 345
           + 
Sbjct: 303 LD 304

>pdb|1UXH|A Chain A, Large Improvement In The Thermal Stability Of A Tetrameric Malate Dehydrogenase By Single Point Mutations At The Dimer-Dimer Interface Length = 309

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 171 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 228
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVQDVQAMLMGGHGDEMVPLPRFST 187
Query: 229 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 285
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 286 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 343
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E   L  + K +  +
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRAT 302
Query: 344 IQ 345
           + 
Sbjct: 303 LD 304

>pdb|2HJR|A Chain A, Crystal Structure Of Cryptosporidium Parvum Malate Dehydrogenase Length = 328

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 89/158 (56%), Gaps = 17/158 (10%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISH----MDTGAVVRG 96
           K++I+GA G IG  +A+L+    L  V +++D++     G   D++H    + + A + G
Sbjct: 16  KISIIGA-GQIGSTIALLLGQKDLGDV-YMFDIIEGVPQGKALDLNHCMALIGSPAKIFG 73
Query: 97  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
                 L+N+    D+VII AGVPRKP MTR DL  +NA IV ++ E + K CPNA V  
Sbjct: 74  ENNYEYLQNS----DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVIC 129
Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVR 193
           I+NP+++ V      FK+       K+ G++ +LD  R
Sbjct: 130 ITNPLDAMV----YYFKEKSGIPANKVCGMSGVLDSAR 163

>pdb|1GUY|A Chain A, Structural Basis For Thermophilic Protein Stability: Structures Of Thermophilic And Mesophilic Malate Dehydrogenases Length = 309

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 171 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 228
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFST 187
Query: 229 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 285
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 286 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 343
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E   L  + K +  +
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRAT 302
Query: 344 IQ 345
           + 
Sbjct: 303 LD 304

>pdb|1UR5|A Chain A, Stabilization Of A Tetrameric Malate Dehydrogenase By Introduction Of A Disulfide Bridge At The DimerDIMER Interface Length = 309

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 114/242 (47%), Gaps = 16/242 (6%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+++   +AAE
Sbjct: 72  DVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLAAE 131
Query: 171 VFKKAGTYDPKKLLG-VTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTI-LPLLSQ 228
           V      +  ++++G   +LD  R  TF+A                 H    + LP  S 
Sbjct: 132 V----SGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGHGDEMVPLPRFSC 187
Query: 229 VK--PPCSFTQ-EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRG 285
           +   P   F   +    +  R + GG E+V      GSA  + A A  +  +A L+  + 
Sbjct: 188 ISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLLK-TGSAYYAPAAATAQMVEAVLKDKKR 246
Query: 286 DAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS 343
              V   A++  Q  + ++ +F   V LG  G E+I +L PLNE E   L  + K +  +
Sbjct: 247 VMPV--AAYLTGQYGLNDI-YFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRAT 302
Query: 344 IQ 345
           + 
Sbjct: 303 LD 304

>pdb|3OM9|A Chain A, T. Gondii Bradyzoite-Specific Ldh (Ldh1) In Complex With Nad And Oxq Length = 329

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRG 96
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH+    DT   VR 
Sbjct: 9   KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 66
Query: 97  FLGQPQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 151
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 67  ---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 123
Query: 152 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 210
             + +++NP++  V +  E    A       + G+  MLD  R   +VA+          
Sbjct: 124 TFIIVVTNPLDCMVKVMCE----ASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 179
Query: 211 XXXXXXHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 256
                 H G  ++PL+  +     P   F      T+++ E +    +  G E+V 
Sbjct: 180 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR 234

>pdb|1PZE|A Chain A, T.gondii Ldh1 Apo Form Length = 331

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRG 96
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH+    DT   VR 
Sbjct: 11  KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 68
Query: 97  FLGQPQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 151
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 69  ---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 125
Query: 152 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 210
             + +++NP++  V +  E    A       + G+  MLD  R   +VA+          
Sbjct: 126 TFIIVVTNPLDCMVKVMCE----ASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 181
Query: 211 XXXXXXHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 256
                 H G  ++PL+  +     P   F      T+++ E +    +  G E+V 
Sbjct: 182 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR 236

>pdb|1PZG|A Chain A, T.Gondii Ldh1 Complexed With Apad And Sulfate At 1.6 Angstroms Length = 331

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 107/236 (45%), Gaps = 32/236 (13%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM----DTGAVVRG 96
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH+    DT   VR 
Sbjct: 11  KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSHVTSVVDTNVSVRA 68
Query: 97  FLGQPQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPN 151
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 69  ---EYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 125
Query: 152 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXX 210
             + +++NP++  V +  E    A       + G+  MLD  R   +VA+          
Sbjct: 126 TFIIVVTNPLDCMVKVMXE----ASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 181
Query: 211 XXXXXXHAGVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 256
                 H G  ++PL+  +     P   F      T+++ E +    +  G E+V 
Sbjct: 182 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR 236

>pdb|3CZM|A Chain A, T. Gondii Bradyzoite-Specific Ldh (Ldh2) In Complex With Nad And Oxq Length = 326

Iteration: 1
 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+A++G+ G IG  +  L  +  L  V+ L+DVV     G   D S   + A     +  
Sbjct: 10  KIAMIGS-GMIGGTMGYLCVLRELADVV-LFDVVTGMPEGKALDDSQATSIADTNVSVTS 67
Query: 101 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
                 + G D+VII AG+ + PG      +R+DL   NA I+R + +G+ K CP A V 
Sbjct: 68  ANQYEKIAGSDVVIITAGLTKVPGKSDKEWSRNDLLPFNAKIIREVAQGVKKYCPLAFVI 127
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 214
           +++NP++  V    + F +A       + G+  +LD  R   F+A+              
Sbjct: 128 VVTNPLDCMV----KCFHEASGLPKNMVCGMANVLDSARFRRFIADQLEISPRDIQATVI 183
Query: 215 XXHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 264
             H G  +LPL          L +       T+ +   +  R +  G E+V    G GSA
Sbjct: 184 GTH-GDHMLPLARYVTVNGFPLREFIKKGKMTEAKLAEIVERTKKAGGEIVRL-LGQGSA 241
Query: 265 TLSMAYAAVKFADACLR 281
             + A +A+  A A L+
Sbjct: 242 YYAPALSAITMAQAFLK 258

>pdb|1SOV|A Chain A, Toxoplasma Gondii Bradyzoite-specific Ldh (ldh2) Apo Form Length = 328

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 113/257 (43%), Gaps = 26/257 (10%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+A++G+ G IG  +  L  +  L  V+ L+DVV     G   D S   + A     +  
Sbjct: 10  KIAMIGS-GMIGGTMGYLCVLRELADVV-LFDVVTGMPEGKALDDSQATSIADTNVSVTS 67
Query: 101 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
                 + G D+VII AG+ + PG      +R+DL   NA I+R + +G+ K CP A V 
Sbjct: 68  ANQYEKIAGSDVVIITAGLTKVPGKSDKEWSRNDLLPFNAKIIREVAQGVKKYCPLAFVI 127
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 214
           +++NP++  V    + F +A       + G+  +LD  R   F+A+              
Sbjct: 128 VVTNPLDCMV----KCFHEASGLPKNMVCGMANVLDSARFRRFIADQLEISPRDIQATVI 183
Query: 215 XXHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 264
             H G  +LPL          L +       T+ +   +  R +  G E+V    G GSA
Sbjct: 184 GTH-GDHMLPLARYVTVNGFPLREFIKKGKMTEAKLAEIVERTKKAGGEIVRL-LGQGSA 241
Query: 265 TLSMAYAAVKFADACLR 281
             + A +A+  A A L+
Sbjct: 242 YYAPALSAITMAQAFLK 258

>pdb|1A5Z|A Chain A, Lactate Dehydrogenase From Thermotoga Maritima (tmldh) Length = 319

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 5/95 (5%)
Query: 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 166
           L G D+VI+ AGVP+KPG TR  L   NA +++ +   ++K  P++ V +++NPV+    
Sbjct: 65  LKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD---- 120
Query: 167 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 200
           +    F K    DP+K+ G  T+LD  R  T +A+
Sbjct: 121 VLTYFFLKESGMDPRKVFGSGTVLDTARLRTLIAQ 155

>pdb|1U4O|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With 2,6- Naphthalenedicarboxylic Acid Length = 321

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 5   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 62
Query: 101 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 63  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 122
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 213
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 123 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 177
Query: 214 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 178 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 233
Query: 264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 321
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 234 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 290
Query: 322 LGPLNEYERIGLEKAKKE 339
           L  LN  E+   ++A  E
Sbjct: 291 L-QLNSEEKAKFDEAIAE 307

>pdb|1T24|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With Nad+ And 4- Hydroxy-1,2,5-Oxadiazole-3-Carboxylic Acid Length = 322

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 101 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 213
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 214 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 234
Query: 264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 321
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 322 LGPLNEYERIGLEKAKKE 339
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNSEEKAKFDEAIAE 308

>pdb|1XIV|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase Complexed With 2-({4- Chloro-[hydroxy(Methoxy)methyl]cyclohexyl}amino)ethane- 1,1,2-Triol Length = 323

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 5   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 62
Query: 101 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 63  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 122
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 213
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 123 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 177
Query: 214 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 178 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 233
Query: 264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 321
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 234 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 290
Query: 322 LGPLNEYERIGLEKAKKE 339
           L  LN  E+   ++A  E
Sbjct: 291 L-QLNSEEKAKFDEAIAE 307

>pdb|1CEQ|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of Plasmodium Falciparum Lactate Dehydrogenase Length = 316

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 101 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGSDVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 213
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 214 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 234
Query: 264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 321
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 322 LGPLNEYERIGLEKAKKE 339
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNSEEKAKFDEAIAE 308

>pdb|2D4A|A Chain A, Structure Of The Malate Dehydrogenase From Aeropyrum Pernix Length = 308

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 140/309 (45%), Gaps = 35/309 (11%)
Query: 44  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHM--DTGAVVRGFLGQ 100
           + ILGA G +G   A+++ +     +L +      P G   D++H   + G  +R   G 
Sbjct: 2   ITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIR-ISGS 59
Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
              E+ + G D+V++ AG+ RKPGMTR+ L   NA  +  L E I     +A V + +NP
Sbjct: 60  NSYED-MRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNP 118
Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHAG 219
           V++   +   ++KK G +  ++++G + +LD  R   ++++                H  
Sbjct: 119 VDAMTYV---MYKKTG-FPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAIVLGMHGQ 174
Query: 220 VTI-LPLLSQV-KPPCS--FTQEETEYLTNRIQNGGTEVVEAKAGAG----SATLSMAYA 271
               +P LS V   P     ++EE E + +   N G ++ E +  +     +A L +   
Sbjct: 175 KMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITELRGYSSNYGPAAGLVLTVE 234
Query: 272 AVKFADACLR----GLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNE 327
           A+K     +      L+G+ G  +       V E+P       +G+ G E I +L PL E
Sbjct: 235 AIKRDSKRIYPYSLYLQGEYGYNDI------VAEVPAV-----IGKSGIERIIEL-PLTE 282
Query: 328 YERIGLEKA 336
            E+   ++A
Sbjct: 283 DEKRKFDEA 291

>pdb|3FI9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Porphyromonas Gingivalis Length = 343

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 129/321 (40%), Gaps = 41/321 (12%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYD--VVNTPGVTADISHMDTGAVVRGFLG- 99
           K+ I+GAAG IG  +A    +  L   L LYD   V   GV  +I H        GF G 
Sbjct: 10  KLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-------GFEGL 62
Query: 100 ----QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-V 154
                  ++ ALT    ++   G PRK GMTR+DL   NA I   L + I   CP+   V
Sbjct: 63  NLTFTSDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHV 122
Query: 155 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXX 214
            +I NP +    I   V        P ++  +  LD  R  + +A+              
Sbjct: 123 IIIFNPAD----ITGLVTLIYSGLKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRT 178
Query: 215 XXHAGVTILPLLSQVK---PPCS-------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA 264
               G  +    S  K    P +        T E+   L  R+  GG  +++ +    S+
Sbjct: 179 YGGHGEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR--GRSS 236
Query: 265 TLSMAYAAVKFADACLRG--LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAE--EIF 320
             S +Y +++   A + G   R  AG     +V     E    A +  + + G +  +I 
Sbjct: 237 FQSPSYVSIEMIRAAMGGEAFRWPAG----CYVNVPGFEHIMMAMETTITKDGVKHSDIN 292
Query: 321 QLGPLNEYERIGLEKAKKELA 341
           QLG  NE ER  L+++   LA
Sbjct: 293 QLG--NEAERAALKESYSHLA 311

>pdb|1HLP|A Chain A, Structural Features Stabilizing Halophilic Malate Dehydrogenase From An Archaebacterium Length = 303

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 119/280 (42%), Gaps = 28/280 (10%)
Query: 77  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 133
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 40  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 94
Query: 134 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 192
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 95  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 150
Query: 193 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 249
           R    ++E                H G   +P+ S+V+   +   F+ +E E L   +Q 
Sbjct: 151 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVRVDGTDPEFSGDEKEQLLGDLQE 209
Query: 250 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 306
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 210 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 262
Query: 307 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
             VRLG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 263 VPVRLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 301

>pdb|2HLP|A Chain A, Crystal Structure Of The E267r Mutant Of A Halophilic Malate Dehydrogenase In The Apo Form Length = 303

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 119/280 (42%), Gaps = 28/280 (10%)
Query: 77  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 133
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 40  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 94
Query: 134 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 192
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 95  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 150
Query: 193 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 249
           R    ++E                H G   +P+ S+V+   +   F+ +E E L   +Q 
Sbjct: 151 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVRVDGTDPEFSGDEKEQLLGDLQE 209
Query: 250 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 306
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 210 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGRVLPASVKLEGEFGHEDTAFG 262
Query: 307 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
             VRLG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 263 VPVRLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 301

>pdb|2J5K|A Chain A, 2.0 A Resolution Structure Of The Wild Type Malate Dehydrogenase From Haloarcula Marismortui (radiation Damage Series) Length = 304

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 119/280 (42%), Gaps = 28/280 (10%)
Query: 77  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 133
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 41  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 95
Query: 134 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 192
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 96  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 151
Query: 193 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 249
           R    ++E                H G   +P+ S+V+   +   F+ +E E L   +Q 
Sbjct: 152 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVRVDGTDPEFSGDEKEQLLGDLQE 210
Query: 250 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 306
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 211 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 263
Query: 307 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
             VRLG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 264 VPVRLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 302

>pdb|3NEP|X Chain X, 1.55a Resolution Structure Of Malate Dehydrogenase From Salinibacter Ruber Length = 314

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 18/220 (8%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           D+ II AG+PR PGM+RDDL   N  IV  + E   +  P++T+ +++NP++    +A E
Sbjct: 71  DVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVAYE 130
Query: 171 VFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPL---- 225
               A  +   +++G+  +LD  R  +F+AE                H G T++PL    
Sbjct: 131 ----ASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALLMGGH-GDTMVPLPRYT 185
Query: 226 -LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLR 284
            +  +  P        E +  R +  G E+V+      SA  +   AA +  +A    L+
Sbjct: 186 TVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM--GTSAWYAPGAAAAEMTEAI---LK 240
Query: 285 GDAGVVECAFVASQVTELP--FFASKVRLGRQGAEEIFQL 322
            +  ++ CA        L   F    V+LG  G EE+ ++
Sbjct: 241 DNKRILPCAAYCDGEYGLDDLFIGVPVKLGAGGVEEVIEV 280

>pdb|2A92|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Plasmodium Vivax: Complex With Nadh Length = 321

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 35/315 (11%)
Query: 46  ILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQPQL 103
           +L  +G IG  +A L+    L  V+ ++DVV N P G   D SH +  A     +     
Sbjct: 7   VLVGSGMIGGVMATLIVQKNLGDVV-MFDVVKNMPQGKALDTSHSNVMAYSNCKVTGSNS 65
Query: 104 ENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158
            + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I   CPNA + +++
Sbjct: 66  YDDLKGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNLCPNAFIIVVT 125
Query: 159 NPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXX 216
           NPV+  V +   +F+ +G   PK K++G+  +LD  R   ++++                
Sbjct: 126 NPVDVMVQL---LFEHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNALIVGA 180
Query: 217 HAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266
           H    +L          PL   +      T EE E + +R  N   E+V   A   S  +
Sbjct: 181 HGNKMVLLKRYITVGGIPLQEFINNK-KITDEEVEGIFDRTVNTALEIVNLLA---SPYV 236
Query: 267 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQLGP 324
           + A A ++ A++ L+ ++    V+ C+  +  Q      F  + + +G  G E++ +L  
Sbjct: 237 APAAAIIEMAESYLKDIK---KVLVCSTLLEGQYGHSNIFGGTPLVIGGTGVEQVIEL-Q 292
Query: 325 LNEYERIGLEKAKKE 339
           LN  E+   ++A  E
Sbjct: 293 LNAEEKTKFDEAVAE 307

>pdb|1Y6J|A Chain A, L-Lactate Dehydrogenase From Clostridium Thermocellum Cth-1135 Length = 318

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 133/324 (41%), Gaps = 46/324 (14%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           KVAI+GA G +G   A  M +    + L L DV      G   DI+H         F+GQ
Sbjct: 9   KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHG------LPFMGQ 61
Query: 101 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
             L     + +   D++++ AG  RKPG TR DL   N  I + + + I K   +  + +
Sbjct: 62  MSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV 121
Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXX 215
           +SNPV+    I   + +K       K++G  T+LD +R    ++E               
Sbjct: 122 VSNPVD----IITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYIIG 177
Query: 216 XHAGVTILPLLSQVK------------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263
            H G + LPL S               P C+FT+E+ + +   ++  G  +++ K   G+
Sbjct: 178 EH-GDSQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIKNK---GA 233
Query: 264 ATLSMAYAAVKFADACLRG---LRGDAGVVECAF-VASQVTELPFFASKVRLGRQGAEEI 319
               +A +     +  L+    +R    V+   + +      LP   +      +G +E+
Sbjct: 234 TYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYGIEDVAISLPSIVNS-----EGVQEV 288
Query: 320 FQLGPLNEYE---RIGLEKAKKEL 340
            Q     E E   R   E+ KK L
Sbjct: 289 LQFNLTPEEEEALRFSAEQVKKVL 312

>pdb|2EWD|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From Cryptosporidium Parvum Complexed With Substrate (Pyruvic Acid) And Cofactor Analog (3-Acetylpyridine Adenine Dinucleotide). Length = 317

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 22/228 (9%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISH-MDTGAVVRGFLG 99
           K+A++G+ G IG  +A ++  + L  V+ L+D+      G   DI+H M         +G
Sbjct: 6   KIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAEGIPQGKALDITHSMVMFGSTSKVIG 63
Query: 100 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159
                + ++G D+VII A +P +P   R +L   NA I+ ++ EG+ K CPNA V  I+N
Sbjct: 64  TDDYAD-ISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122
Query: 160 PVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHA 218
           P++    +    F+K       K+ G+  +LD  R  TF+A+                H 
Sbjct: 123 PLD----VMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGGH- 177
Query: 219 GVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 256
           G  ++P  S V     P  SF      TQE+ + +    +    EV +
Sbjct: 178 GDGMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVAD 225

>pdb|1HYG|A Chain A, Crystal Structure Of Mj0490 Gene Product, The Family Of LactateMALATE DEHYDROGENASE Length = 313

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 42  FKVAILGAAGGIGQPLAMLMKINPLVSVLHL----YDVVNTPGVTADISHMDTGAVVRGF 97
            KV I+GA+G +G   A+L+   P +  L L    + +    G+  DI     G      
Sbjct: 1   MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDAN 60
Query: 98  LGQPQLEN--ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           +     EN   +   D+VII +GVPRK GM+R DL   NA IV    + IA+ C +  + 
Sbjct: 61  IYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIF 119
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 214
           +I+NPV+  +   A V  K   ++  ++ G+ T LD +R    +A+              
Sbjct: 120 VITNPVD-VMTYKALVDSK---FERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTRII 175
Query: 215 XXHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 261
             H G +++PLLS        ++    F +   + +   ++  G +++  K G+
Sbjct: 176 GEH-GDSMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIRLKGGS 228

>pdb|2FM3|A Chain A, Crystal Structure Of The Lactate Dehydrogenase From Cryptosporidium Parvum Complexed With Substrate (Pyruvic Acid) And Cofactor (B- Nicotinamide Adenine Dinucleotide) Length = 321

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 22/228 (9%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISH-MDTGAVVRGFLG 99
           K+A++G+ G IG  +A ++  + L  V+ L+D+      G   DI+H M         +G
Sbjct: 6   KIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAEGIPQGKALDITHSMVMFGSTSKVIG 63
Query: 100 QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN 159
                + ++G D+VII A +P +P   R +L   NA I+ ++ EG+ K CPNA V  I+N
Sbjct: 64  TNDYAD-ISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122
Query: 160 PVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANTFVAEXXXXXXXXXXXXXXXXHA 218
           P++    +    F+K       K+ G+  +LD  R  TF+A+                H 
Sbjct: 123 PLD----VMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGGH- 177
Query: 219 GVTILPLLSQVK----PPCSF------TQEETEYLTNRIQNGGTEVVE 256
           G  ++P  S V     P  SF      TQE+ + +    +    EV +
Sbjct: 178 GDGMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVAD 225

>pdb|1CET|A Chain A, Chloroquine Binds In The Cofactor Binding Site Of Plasmodium Falciparum Lactate Dehydrogenase. Length = 316

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 142/318 (44%), Gaps = 36/318 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 101 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
               + L G D+VI+ AG  + PG       R DL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGSDVVIVTAGFTKAPGKSDKEWNRLDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 213
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 214 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263
              H    +L          PL   +      +  E E + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---S 234
Query: 264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 321
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 322 LGPLNEYERIGLEKAKKE 339
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNSEEKAKFDEAIAE 308

>pdb|1OC4|A Chain A, Lactate Dehydrogenase From Plasmodium Berghei Length = 322

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G+ G IG  +A L+    L  V+ ++D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-MFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 101 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
               + L   D+VI+ AG  + PG       RDDL  +N  I+  +   I   CPNA + 
Sbjct: 64  SNTYDDLKDADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKNNCPNAFII 123
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 213
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIVGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 214 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263
              H    +L          PL   +      T +E + + +R  N   E+V   A   S
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNK-KITDQELDAIFDRTINTALEIVNLHA---S 234
Query: 264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFA-SKVRLGRQGAEEIFQ 321
             ++ A A ++ A++ +R LR    V+ C+  +  Q      FA + + +G  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYIRDLR---KVLICSTLLEGQYGHKDIFAGTPLVIGGNGVEQVIE 291
Query: 322 LGPLNEYERIGLEKAKKE 339
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNADEKKKFDEAVAE 308

>pdb|2X0R|A Chain A, R207s,R292s Mutant Of Malate Dehydrogenase From The Halophilic Archaeon Haloarcula Marismortui (Holo Form) Length = 304

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 28/280 (10%)
Query: 77  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 133
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 41  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 95
Query: 134 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 192
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 96  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 151
Query: 193 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 249
           R    ++E                H G   +P+ S+V    +   F+ +E E L   +Q 
Sbjct: 152 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQE 210
Query: 250 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 306
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 211 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 263
Query: 307 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
             V LG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 264 VPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 302

>pdb|1O6Z|A Chain A, 1.95 A Resolution Structure Of (r207s,r292s) Mutant Of Malate Dehydrogenase From The Halophilic Archaeon Haloarcula Marismortui (holo Form) Length = 303

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 28/280 (10%)
Query: 77  NTPGVTADISH---MDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI 133
           +T G  AD +H    D+   VR    Q   E+   G D+V+I AG+PR+PG TR DL   
Sbjct: 40  DTVGQAADTNHGIAYDSNTRVR----QGGYEDT-AGSDVVVITAGIPRQPGQTRIDLAGD 94
Query: 134 NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVV 192
           NA I+  +   + +   +      SNPV+    +      +AG    ++++G    LD  
Sbjct: 95  NAPIMEDIQSSLDEHNDDYISLTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSA 150
Query: 193 RANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQVKPPCS---FTQEETEYLTNRIQN 249
           R    ++E                H G   +P+ S+V    +   F+ +E E L   +Q 
Sbjct: 151 RFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQE 209
Query: 250 GGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT---ELPFFA 306
              +V+E K   G+     A       +A L     D G V  A V  +     E   F 
Sbjct: 210 SAMDVIERK---GATEWGPARGVAHMVEAILH----DTGEVLPASVKLEGEFGHEDTAFG 262
Query: 307 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
             V LG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 263 VPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 301

>pdb|1T2E|A Chain A, Plasmodium Falciparum Lactate Dehydrogenase S245a, A327p Mutant Complexed With Nadh And Oxamate Length = 322

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 143/318 (44%), Gaps = 36/318 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G+ G IG  +A L+    L  V+ L+D+V N P G   D SH +  A     +  
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSHTNVMAYSNCKVSG 63
Query: 101 PQLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
               + L G D+VI+ AG  + PG       RDDL  +N  I+  +   I K CPNA + 
Sbjct: 64  SNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFII 123
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXX 213
           +++NPV+  V +   + + +G   PK K++G+  +LD  R   ++++             
Sbjct: 124 VVTNPVDVMVQL---LHQHSGV--PKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNAHI 178
Query: 214 XXXHAGVTIL----------PLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263
              H    +L          PL   +      +  E E + +R  N   E+V   A   +
Sbjct: 179 VGAHGNKMVLLKRYITVGGIPLQEFINNKL-ISDAELEAIFDRTVNTALEIVNLHA---A 234
Query: 264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFF-ASKVRLGRQGAEEIFQ 321
             ++ A A ++ A++ L+ L+    V+ C+  +  Q      F  + V LG  G E++ +
Sbjct: 235 PYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIE 291
Query: 322 LGPLNEYERIGLEKAKKE 339
           L  LN  E+   ++A  E
Sbjct: 292 L-QLNSEEKAKFDEAIAE 308

>pdb|2X0I|A Chain A, 2.9 A Resolution Structure Of Malate Dehydrogenase From Archaeoglobus Fulgidus In Complex With Nadh Length = 294

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 50  AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL-----E 104
           AG +G   A    +N  V  + L D+     V      MD      G    P++      
Sbjct: 8   AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVG---EAMDLAHAAAGIDKYPKIVGGADY 64
Query: 105 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST 164
           + L G +++++ AG+ RKPGMTR DL + NAGI++ + + I +  P + + +++NP++  
Sbjct: 65  SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVM 124
Query: 165 VPIAA--------EVFKKAGTYDPKKL 183
             I          EVF      D ++L
Sbjct: 125 TYIMWKESGKPRNEVFGMGNQLDSQRL 151

>pdb|4H7P|A Chain A, Crystal Structure Of A Putative Cytosolic Malate Dehydrogenase From Leishmania Major Friedlin Length = 345

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 33/190 (17%)
Query: 30  QAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD 89
           +A+ +  G  +  KVA+ GAAG IG  L  L+    L+           P    ++  +D
Sbjct: 13  EAQTQGPGSMSAVKVAVTGAAGQIGYALVPLIARGALLG----------PTTPVELRLLD 62
Query: 90  TGAVVRGFLG-QPQLEN-----------------ALTGMDLVIIPAGVPRKPGMTRDDLF 131
               ++   G + +LE+                 A  G+ + I+    PRK GM R DL 
Sbjct: 63  IEPALKALAGVEAELEDCAFPLLDKVVVTADPRVAFDGVAIAIMCGAFPRKAGMERKDLL 122
Query: 132 NINAGIVRTLCEGIAK-CCPNATVNLISNPVNSTVPIAAEVFKKA-GTYDPKKLLGVTML 189
            +NA I +   E IA     +  V ++ NP N+   I   + K A G  +P+ +  +T L
Sbjct: 123 EMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALI---LLKSAQGKLNPRHVTAMTRL 179
Query: 190 DVVRANTFVA 199
           D  RA + +A
Sbjct: 180 DHNRALSLLA 189

>pdb|1LLC|A Chain A, Structure Determination Of The Allosteric L-Lactate Dehydrogenase From Lactobacillus Casei At 3.0 Angstroms Resolution Length = 325

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 26/244 (10%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           DLV+I AG P++PG TR DL N N  I++++ + I     N    + +NPV+    I   
Sbjct: 77  DLVVITAGAPKQPGETRLDLVNKNLKILKSIVDPIVDSGFNLIFLVAANPVD----ILTY 132
Query: 171 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 228
              K   +   +++G  T LD  R    +AE                H G T  P+ S  
Sbjct: 133 ATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEH-GDTEFPVWSHA 191
Query: 229 ----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 278
                     VK      +++   +   +++   E+++ K   G+    +A A  + + A
Sbjct: 192 NIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLK---GATFYGIATALARISKA 248
Query: 279 CLRGLRGDAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 336
            L     +A +    ++  Q  + +L +  +   + R G + I ++ PL ++E   ++K+
Sbjct: 249 ILND--ENAVLPLSVYMDGQYGINDL-YIGTPAVINRNGIQNILEI-PLTDHEEESMQKS 304
Query: 337 KKEL 340
             +L
Sbjct: 305 ASQL 308

>pdb|2ZQY|A Chain A, T-State Structure Of Allosteric L-Lactate Dehydrogenase From Lactobacillus Casei Length = 326

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 26/244 (10%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           DLV+I AG P+KPG TR DL N N  I++++ + I     N    + +NPV+    I   
Sbjct: 78  DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD----ILTY 133
Query: 171 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 228
              K   +   +++G  T LD  R    +AE                H G T  P+ S  
Sbjct: 134 ATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMGEH-GDTEFPVWSHA 192
Query: 229 ----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 278
                     VK      +++   +   +++   E+++ K   G+    +A A  + + A
Sbjct: 193 NIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLK---GATFYGIATALARISKA 249
Query: 279 CLRGLRGDAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 336
            L     +A +    ++  Q  + ++ +  +   + R G + I ++ PL ++E   ++K+
Sbjct: 250 ILND--ENAVLPLSVYMDGQYGLNDI-YIGTPAVINRNGIQNILEI-PLTDHEEESMQKS 305
Query: 337 KKEL 340
             +L
Sbjct: 306 ASQL 309

>pdb|3VKU|A Chain A, Penta Mutant Of Lactobacillus Casei Lactate Dehydrogenase Length = 326

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 104/244 (42%), Gaps = 26/244 (10%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           DLV+I AG P+KPG TR DL N N  I++++ + I     N    + +NPV+    I   
Sbjct: 78  DLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVD----ILTY 133
Query: 171 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ- 228
              K   +   +++G  T LD  R    +A+                H G T  P+ S  
Sbjct: 134 ATWKLSGFPKNRVVGSGTSLDTARFRQSIAKMVNVDARSVHAYIMGEH-GDTEFPVWSHA 192
Query: 229 ----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADA 278
                     VK      +++   +   ++N   E+++ K   G+    +A A  + + A
Sbjct: 193 NIGGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIKLK---GATFYGIATALARISKA 249
Query: 279 CLRGLRGDAGVVECAFVASQ--VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA 336
            L     +A +    ++  Q  + ++ +  +   + R G + I ++ PL ++E   ++K+
Sbjct: 250 ILND--ENAVLPLSVYMDGQYGLNDI-YIGTPAVINRNGIQNILEI-PLTDHEEESMQKS 305
Query: 337 KKEL 340
             +L
Sbjct: 306 ASQL 309

>pdb|2LDX|A Chain A, Characterization Of The Antigenic Sites On The Refined 3- Angstroms Resolution Structure Of Mouse Testicular Lactate Dehydrogenase C4 Length = 331

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 71/326 (21%), Positives = 128/326 (39%), Gaps = 33/326 (10%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           K+ ++G  G +G   A+ + +  L   L L D  +T  +  +   +  G++   FL  P+
Sbjct: 21  KITVVGV-GDVGMACAISILLKGLADELALVDA-DTDKLRGEALDLQHGSL---FLSTPK 75
Query: 103 L-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
           +      N      LVII AG     G TR DL   N  I++ +  G+ +  P+  + ++
Sbjct: 76  IVFGKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVV 135
Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXXXX 216
           +NPV+    I   V  K   +   +++G    LD  R    + E                
Sbjct: 136 TNPVD----ILTYVVWKISGFPVGRVIGSGCNLDSARFRYLIGEKLGVNPTSCHGWVLGE 191
Query: 217 HAGVTILPLLSQVK---------PPCSFTQEETEYLTN---RIQNGGTEVVEAKAGAGSA 264
           H G + +P+ S V           P   T +  ++  N   ++  GG EV++ K   G  
Sbjct: 192 H-GDSSVPIWSGVNVAGVTLKSLNPAIGTDKNKQHWKNVHKQVVEGGYEVLDMK---GYT 247
Query: 265 TLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGP 324
           + ++  +    A + L+ L+    V         + E  F +    LG  G  +  ++  
Sbjct: 248 SWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHGIKEEVFLSIPCVLGESGITDFVKVNM 307
Query: 325 LNEYERIGLEKAKKELAGSIQKGISF 350
             E E  GL K   +   ++QK +  
Sbjct: 308 TAEEE--GLLKKSADTLWNMQKNLEL 331

>pdb|2V6B|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Deinococcus Radiodurans (Apo Form) Length = 304

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS 163
            + L    +VI+ AG  +KPG +R DL   NA I R L   I +  P+A + + SNPV+ 
Sbjct: 62  HSELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDL 121
Query: 164 TVPIAAEV 171
              +A ++
Sbjct: 122 LTDLATQL 129

>pdb|1BMD|A Chain A, Determinants Of Protein Thermostability Observed In The 1.9 Angstroms Crystal Structure Of Malate Dehydrogenase From The Thermophilic Bacterium Thermus Flavus Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 40  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHM 88
           A  +VA+ GAAG IG  L        ML K  P+  +L L ++        GV  ++   
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPV--ILQLLEIPQAMKALEGVVMELEDC 60
Query: 89  DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 148
               ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+ 
Sbjct: 61  -AFPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119
Query: 149 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 200
              +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 120 AKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|3H3F|A Chain A, Rabbit Muscle L-Lactate Dehydrogenase In Complex With Nadh And Oxamate Length = 331

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 73/332 (21%), Positives = 136/332 (40%), Gaps = 45/332 (13%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVMEDKLKGEMMDLQH---GSL---FLRT 73
Query: 101 PQLENALTGMD--------LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 152
           P++   ++G D        LVII AG  ++ G +R +L   N  I + +   + K  P+ 
Sbjct: 74  PKI---VSGKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPHC 130
Query: 153 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXX 211
            + ++SNPV+    I   V  K   +   +++G    LD  R    + E           
Sbjct: 131 KLLVVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHALSCHG 186
Query: 212 XXXXXH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAK 258
                H             AGV++  L  ++       +E+ + +  ++ +   EV++ K
Sbjct: 187 WILGEHGDSSVPVWSGMNVAGVSLKTLHPELGTDAD--KEQWKQVHKQVVDSAYEVIKLK 244
Query: 259 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEE 318
              G  T ++  +    A++ ++ LR    +         + E  F +    LG+ G  +
Sbjct: 245 ---GYTTWAIGLSVADLAESIMKNLRRVHPISTMLKGLYGIKEDVFLSVPCVLGQNGISD 301
Query: 319 IFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
           + ++  L   E   L+K+   L G IQK + F
Sbjct: 302 VVKV-TLTSEEEAHLKKSADTLWG-IQKELQF 331

>pdb|1BDM|A Chain A, The Structure At 1.8 Angstroms Resolution Of A Single Site Mutant (T189i) Of Malate Dehydrogenase From Thermus Flavus With Increased Enzymatic Activity Length = 327

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 40  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHM 88
           A  +VA+ GAAG IG  L        ML K  P+  +L L ++        GV  ++   
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPV--ILQLLEIPQAMKALEGVVMELEDC 60
Query: 89  DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 148
               ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+ 
Sbjct: 61  -AFPLLAGLEATDDPDVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119
Query: 149 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 200
              +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 120 AKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|1LLD|A Chain A, Molecular Basis Of Allosteric Activation Of Bacterial L-Lactate Dehydrogenase Length = 319

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           D+V+I AG  +KPG +R +L      I++ +   + K  PNA   LI+NPV+    IA  
Sbjct: 77  DMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVD----IATH 132
Query: 171 VFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 200
           V +K       ++ G  T LD  R    +A+
Sbjct: 133 VAQKLTGLPENQIFGSGTNLDSARLRFLIAQ 163

>pdb|1IZ9|A Chain A, Crystal Structure Of Malate Dehydrogenase From Thermus Thermophilus Hb8 Length = 327

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 18/173 (10%)
Query: 40  AGFKVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNT----PGVTADISHM 88
           A  +VA+ GAAG IG  L        ML K  P+  +L L ++        GV  ++   
Sbjct: 3   APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPV--ILQLLEIPQAMKALEGVVMELEDC 60
Query: 89  DTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 148
               ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+ 
Sbjct: 61  -AFPLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV 119
Query: 149 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 200
              +  V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 120 AKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|1I10|A Chain A, Human Muscle L-Lactate Dehydrogenase M Chain, Ternary Complex With Nadh And Oxamate Length = 331

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 37/328 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLRT 73
Query: 101 PQL-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           P++      N      LVII AG  ++ G +R +L   N  I + +   + K  PN  + 
Sbjct: 74  PKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLL 133
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 214
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 134 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 189
Query: 215 XXHAGVTILPLLS----------QVKPPCSFTQEETEY--LTNRIQNGGTEVVEAKAGAG 262
             H G + +P+ S           + P     +++ ++  +  ++     EV++ K   G
Sbjct: 190 GEH-GDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLK---G 245
Query: 263 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 322
             + ++  +    A++ ++ LR    V         + +  F +    LG+ G  ++ ++
Sbjct: 246 YTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKV 305
Query: 323 GPLNEYERIGLEKAKKELAGSIQKGISF 350
             L   E   L+K+   L G IQK + F
Sbjct: 306 -TLTSEEEARLKKSADTLWG-IQKELQF 331

>pdb|4AJP|A Chain A, Human Ldha In Complex With 2-((4-(4-((3-((2-Methyl-1,3- Benzothiazol-6yl)amino)-3-Oxo-Propyl)amino)-4-Oxo-Butyl) Phenyl)methyl)propanedioic Acid Length = 337

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 37/328 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLRT 73
Query: 101 PQL-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           P++      N      LVII AG  ++ G +R +L   N  I + +   + K  PN  + 
Sbjct: 74  PKIVSGKDYNVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPNCKLL 133
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 214
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 134 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 189
Query: 215 XXHAGVTILPLLS----------QVKPPCSFTQEETEY--LTNRIQNGGTEVVEAKAGAG 262
             H G + +P+ S           + P     +++ ++  +  ++     EV++ K   G
Sbjct: 190 GEH-GDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHKQVVESAYEVIKLK---G 245
Query: 263 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 322
             + ++  +    A++ ++ LR    V         + +  F +    LG+ G  ++ ++
Sbjct: 246 YTSWAIGLSVADLAESIMKNLRRVHPVSTMIKGLYGIKDDVFLSVPCILGQNGISDLVKV 305
Query: 323 GPLNEYERIGLEKAKKELAGSIQKGISF 350
             L   E   L+K+   L G IQK + F
Sbjct: 306 -TLTSEEEARLKKSADTLWG-IQKELQF 331

>pdb|1LDN|A Chain A, Structure Of A Ternary Complex Of An Allosteric Lactate Dehydrogenase From Bacillus Stearothermophilus At 2.5 Angstroms Resolution Length = 316

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           DLV+I AG  +KPG TR DL + N  I R++ E +          + +NPV+    +   
Sbjct: 76  DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD---ILTYA 132
Query: 171 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ-- 228
            +K +G    + +   T+LD  R    + E                H G T LP+ SQ  
Sbjct: 133 TWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEH-GDTELPVWSQAY 191
Query: 229 ---------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA--- 276
                    V+      Q++ E +   +++   +++E K GA    ++M  A V  A   
Sbjct: 192 IGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIE-KKGATYYGIAMGLARVTRAILH 250
Query: 277 --------DACLRGLRGDAGV 289
                    A L GL G+  V
Sbjct: 251 NENAILTVSAYLDGLYGERDV 271

>pdb|1LDB|A Chain A, Structure Determination And Refinement Of Bacillus Stearothermophilus Lactate Dehydrogenase Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE 170
           DLV+I AG  +KPG TR DL + N  I R++ E +          + +NPV+    +   
Sbjct: 76  DLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVD---ILTYA 132
Query: 171 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXHAGVTILPLLSQ-- 228
            +K +G    + +   T+LD  R    + E                H G T LP+ SQ  
Sbjct: 133 TWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEH-GDTELPVWSQAY 191
Query: 229 ---------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFA--- 276
                    V+      Q++ E +   +++   +++E K GA    ++M  A V  A   
Sbjct: 192 IGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIE-KKGATYYGIAMGLARVTRAILH 250
Query: 277 --------DACLRGLRGDAGV 289
                    A L GL G+  V
Sbjct: 251 NENAILTVSAYLDGLYGERDV 271

>pdb|1WZE|A Chain A, Structural Basis For Alteration Of Cofactor Specificity Of Malate Dehydrogenase From Thermus Flavus Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 43  KVAILGAAGGIGQPL-------AMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA--V 93
           +VA+ GAAG IG  L        ML K  P++  L L    +   +   +  ++  A  +
Sbjct: 6   RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQL-LGSERSFQALEGVVMELEDCAFPL 64
Query: 94  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNA 152
           + G       + A    D  ++    PRK GM R DL  +N  I       +A+    + 
Sbjct: 65  LAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDV 124
Query: 153 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE 200
            V ++ NP N+   IA   +K A   +P+    +T LD  RA   +A+
Sbjct: 125 KVLVVGNPANTNALIA---YKNAPGLNPRNFTAMTRLDHNRAKAQLAK 169

>pdb|2E37|A Chain A, Structure Of Tt0471 Protein From Thermus Thermophilus Length = 310

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 166
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVXTQ 124
Query: 167 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 200
           +A   ++ +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YRLSGL-PPGRVVGSGTILDTARFRALLAE 155

>pdb|4A73|A Chain A, Single Point Mutant Of Thermus Thermophilus Lactate Dehydrogenase Length = 310

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 166
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQ 124
Query: 167 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 200
           +A   ++ +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YRLSGL-PPGRVVGSGTILDTARFRALLAE 155

>pdb|2V6M|A Chain A, Crystal Structure Of Lactate Dehydrogenase From Thermus Thermophilus Hb8 (Apo Form) Length = 310

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 166
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQ 124
Query: 167 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 200
           +A   ++ +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YRLSGL-PPGRVVGSGTILDTARFRALLAE 155

>pdb|9LDT|A Chain A, Design And Synthesis Of New Enzymes Based On The Lactate Dehydrogenase Framework Length = 332

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 132/328 (40%), Gaps = 37/328 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G  G +G   A+ + +  L   + L DV+     G   D+ H   G++   FL  
Sbjct: 22  KITVVGV-GAVGMACAISILMKELADEIALVDVMEDKLKGEMMDLQH---GSL---FLRT 74
Query: 101 PQL-----ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           P++      N      LV+I AG  ++ G +R +L   N  I + +   I K  PN  + 
Sbjct: 75  PKIVSGKDYNVTANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLL 134
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 214
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 135 VVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWIL 190
Query: 215 XXHAGVTILPLLSQVK---------PPCSFTQEETEY---LTNRIQNGGTEVVEAKAGAG 262
             H G + +P+ S V           P   T  + E+   +   + +   EV++ K   G
Sbjct: 191 GEH-GDSSVPVWSGVNVAGVSLKNLHPELGTDADKEHWKAVHKEVVDSAYEVIKLK---G 246
Query: 263 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQL 322
             + ++  +    A++ ++ LR    +         + E  F +    LG+ G  ++ ++
Sbjct: 247 YTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKENVFLSVPCILGQNGISDVVKV 306
Query: 323 GPLNEYERIGLEKAKKELAGSIQKGISF 350
             L   E   L+K+   L G IQK + F
Sbjct: 307 -TLTPEEEAHLKKSADTLWG-IQKELQF 332

>pdb|4AJ4|A Chain A, Rat Ldha In Complex With 4-((2-Allylsulfanyl-1,3-Benzothizol-6-Yl) Amino)-4-Oxo-Butanoic Acid Length = 332

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 133/329 (40%), Gaps = 39/329 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 22  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLKT 74
Query: 101 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           P++ ++          LVII AG  ++ G +R +L   N  I + +   + K  P   + 
Sbjct: 75  PKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLL 134
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 214
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 135 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 190
Query: 215 XXH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 261
             H             AGV++  L  Q+       +E+ + +  ++ +   EV++ K   
Sbjct: 191 GEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDAD--KEQWKDVHKQVVDSAYEVIKLK--- 245
Query: 262 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 321
           G  + ++  +    A++ ++ LR    +         + E  F +    LG+ G  ++ +
Sbjct: 246 GYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVK 305
Query: 322 LGPLNEYERIGLEKAKKELAGSIQKGISF 350
           +  L   E   L+K+   L G IQK + F
Sbjct: 306 V-TLTPDEEARLKKSADTLWG-IQKELQF 332

>pdb|4AJ1|A Chain A, Rat Ldha In Complex With N-(2-(Methylamino)-1,3- Benzothiazol-6-Yl)acetamide Length = 331

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 71/329 (21%), Positives = 133/329 (40%), Gaps = 39/329 (11%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLKT 73
Query: 101 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           P++ ++          LVII AG  ++ G +R +L   N  I + +   + K  P   + 
Sbjct: 74  PKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLL 133
Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEXXXXXXXXXXXXXX 214
           ++SNPV+    I   V  K   +   +++G    LD  R    + E              
Sbjct: 134 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 189
Query: 215 XXH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 261
             H             AGV++  L  Q+       +E+ + +  ++ +   EV++ K   
Sbjct: 190 GEHGDSSVPVWSGVNVAGVSLKSLNPQLGTDAD--KEQWKDVHKQVVDSAYEVIKLK--- 244
Query: 262 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 321
           G  + ++  +    A++ ++ LR    +         + E  F +    LG+ G  ++ +
Sbjct: 245 GYTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVK 304
Query: 322 LGPLNEYERIGLEKAKKELAGSIQKGISF 350
           +  L   E   L+K+   L G IQK + F
Sbjct: 305 V-TLTPDEEARLKKSADTLWG-IQKELQF 331

>pdb|2XXB|A Chain A, Penta-Mutant Of Thermus Thermophilus Lactate Dehydrogenase, Complex With Amp Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 107 LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP 166
           L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + + +NPV+    
Sbjct: 65  LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQ 124
Query: 167 IAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAE 200
           +A   +  +G   P +++G  T+LD  R    +AE
Sbjct: 125 VA---YALSGL-PPGRVVGSGTILDTARFRALLAE 155

>pdb|3PQD|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus Subtilis Complexed With Fbp And Nad+ Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVA++GA G +G   A  +    +   L + DV N      D+  ++ G   + F  QP 
Sbjct: 7   KVALIGA-GFVGSSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHG---KAFAPQPV 61
Query: 103 LENALT-----GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
             +  T       D+V I AG  +KPG TR +L   N  I + +   +     +    + 
Sbjct: 62  KTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVA 121
Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXH 217
           +NPV+    +    +K +G    + +   T LD  R    ++E                H
Sbjct: 122 TNPVD---ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVHAHIIGEH 178
Query: 218 AGVTILPLLSQ-----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266
            G T LP+ S            V+   ++ QEE + + + ++N    ++E K GA    +
Sbjct: 179 -GDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIE-KKGATYYGV 236
Query: 267 SMAYAAV 273
           +M+ A +
Sbjct: 237 AMSLARI 243

>pdb|3PQE|A Chain A, Crystal Structure Of L-Lactate Dehydrogenase From Bacillus Subtilis With H171c Mutation Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVA++GA G +G   A  +    +   L + DV N      D+  ++ G   + F  QP 
Sbjct: 7   KVALIGA-GFVGSSYAFALINQGITDELVVIDV-NKEKAMGDVMDLNHG---KAFAPQPV 61
Query: 103 LENALT-----GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
             +  T       D+V I AG  +KPG TR +L   N  I + +   +     +    + 
Sbjct: 62  KTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVA 121
Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEXXXXXXXXXXXXXXXXH 217
           +NPV+    +    +K +G    + +   T LD  R    ++E                H
Sbjct: 122 TNPVD---ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHIIGEH 178
Query: 218 AGVTILPLLSQ-----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266
            G T LP+ S            V+   ++ QEE + + + ++N    ++E K GA    +
Sbjct: 179 -GDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIE-KKGATYYGV 236
Query: 267 SMAYAAV 273
           +M+ A +
Sbjct: 237 AMSLARI 243

>pdb|1CIV|A Chain A, Chloroplast Nadp-Dependent Malate Dehydrogenase From Flaveria Bidentis Length = 385

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Query: 120 PRKPGMTRDDLFNINAGIVRTLCEGI-AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY 178
           PR PGM R DL +IN  I     + + A   PN  V ++ NP N+   I     K A   
Sbjct: 129 PRGPGMERADLLDINGQIFAEQGKALNAVASPNVKVMVVGNPCNTNALIC---LKNAPNI 185
Query: 179 DPKKLLGVTMLDVVRANTFVA 199
            PK    +T LD  RA   +A
Sbjct: 186 PPKNFHALTRLDENRAKCQLA 206

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	353
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	0.0
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	1e-176
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	1e-170
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	2e-50
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	2e-43
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	3e-41
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	9e-41
3tl2_A	315	Malate dehydrogenase; center for structural genomi	1e-40
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	2e-40
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	3e-40
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	4e-40
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	1e-39
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	2e-39
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	2e-38
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	3e-38
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	4e-38
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	4e-38
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	1e-37
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	3e-37
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	4e-37
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	4e-37
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	9e-37
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	9e-37
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	1e-36
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	1e-36
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	1e-36
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	8e-36
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	9e-36
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	1e-34
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	5e-34
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	1e-33
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	2e-33
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	2e-33
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	1e-32
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	2e-31
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	4e-31
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	4e-08
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	2e-07
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	3e-07
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	1e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A Length = 326

 Score =  507 bits (1309), Expect = 0.0
 Identities = 292/320 (91%), Positives = 305/320 (95%)

Query: 34  RAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV 93
           RAKGGA GFKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAV
Sbjct: 1   RAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAV 60

Query: 94  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 153
           VRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIV+TLCEGIAKCCP A 
Sbjct: 61  VRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAI 120

Query: 154 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 213
           VNLISNPVNSTVPIAAEVFKKAGTYDPK+LLGVTMLDVVRANTFVAEVLGLDPRDVDVPV
Sbjct: 121 VNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFVAEVLGLDPRDVDVPV 180

Query: 214 VGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAV 273
           VGGHAGVTILPLLSQVKPP SFTQEE  YLT+RIQNGGTEVVEAKAGAGSATLSMAYAAV
Sbjct: 181 VGGHAGVTILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAV 240

Query: 274 KFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL 333
           KFADACLRGLRGDAGV+ECAFV+SQVTELPFFASKVRLGR G EE++ LGPLNEYERIGL
Sbjct: 241 KFADACLRGLRGDAGVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGL 300

Query: 334 EKAKKELAGSIQKGISFSKK 353
           EKAKKELAGSI+KG+SF + 
Sbjct: 301 EKAKKELAGSIEKGVSFIRS 320

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* Length = 314

 Score =  489 bits (1262), Expect = e-176
 Identities = 180/310 (58%), Positives = 231/310 (74%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61

Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct: 62  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121

Query: 163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTI 222
           ST+PI AEVFKK G Y+P K+ GVT LD+VRAN FVAE+ GLDP  V VPV+GGHAG TI
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTI 181

Query: 223 LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRG 282
           +PL+SQ  P   F Q++   LT RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  
Sbjct: 182 IPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDA 241

Query: 283 LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG 342
           + G  GVVEC+FV SQ T+ P+F++ + LG++G E+   +G ++ +E   + +A  EL  
Sbjct: 242 MNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKA 301

Query: 343 SIQKGISFSK 352
           SI+KG  F K
Sbjct: 302 SIKKGEEFVK 311

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* Length = 312

 Score =  475 bits (1226), Expect = e-170
 Identities = 173/313 (55%), Positives = 214/313 (68%), Gaps = 4/313 (1%)

Query: 43  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 100
           KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G 
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG- 60

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
                AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+NP
Sbjct: 61  EDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 220
           VN+TV IAAEV KKAG YD  KL GVT LD++R+NTFVAE+ G  P +V+VPV+GGH+GV
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGV 180

Query: 221 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 280
           TILPLLSQV P  SFT++E   LT RIQN GTEVVEAKAG GSATLSM  AA +F  + +
Sbjct: 181 TILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLV 239

Query: 281 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 340
           R L+G+ GVVECA+V        FF+  + LG+ G EE   +G L+ +E+  LE     L
Sbjct: 240 RALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTL 299

Query: 341 AGSIQKGISFSKK 353
              I  G  F  K
Sbjct: 300 KKDIALGEEFVNK 312

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} Length = 343

 Score =  170 bits (434), Expect = 2e-50
 Identities = 78/317 (24%), Positives = 124/317 (39%), Gaps = 25/317 (7%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTP-GVTADISHMDTGAVVRGFLGQ 100
           K+ I+GAAG IG  +A    +  L   L LYD       GV  +I     G         
Sbjct: 10  KLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEI--RHCGFEGLNLTFT 67

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-VNLISN 159
             ++ ALT    ++   G PRK GMTR+DL   NA I   L + I   CP+   V +I N
Sbjct: 68  SDIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127

Query: 160 PVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA 218
           P + T  +       +G   P ++  +  LD  R  + +A+  G+    V      GGH 
Sbjct: 128 PADITGLVT---LIYSG-LKPSQVTTLAGLDSTRLQSELAKHFGIKQSLVTNTRTYGGH- 182

Query: 219 GVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSM 268
           G  +             L+ +      T E+   L  R+  GG  +++ +    S+  S 
Sbjct: 183 GEQMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR--GRSSFQSP 240

Query: 269 AYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEY 328
           +Y +++   A + G           +V     E    A +  + + G +        NE 
Sbjct: 241 SYVSIEMIRAAMGGEAFR--WPAGCYVNVPGFEHIMMAMETTITKDGVKHSDINQLGNEA 298

Query: 329 ERIGLEKAKKELAGSIQ 345
           ER  L+++   LA    
Sbjct: 299 ERAALKESYSHLAKLRD 315

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A Length = 303

 Score =  151 bits (383), Expect = 2e-43
 Identities = 77/327 (23%), Positives = 134/327 (40%), Gaps = 50/327 (15%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT----ADISHMDTGAVVRGFL 98
           KV+++GAAG +G      + +  +   +   D+ +    T    AD +H         + 
Sbjct: 2   KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHG------IAYD 55

Query: 99  GQPQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 154
              ++         G D+V+I AG+PR+PG TR DL   NA I+  +   + +   +   
Sbjct: 56  SNTRVRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYIS 115

Query: 155 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPV 213
              SNPV+    +      +AG    ++++G    LD  R    ++E      ++V+  +
Sbjct: 116 LTTSNPVD----LLNRHLYEAGDRSREQVIGFGGRLDSARFRYVLSEEFDAPVQNVEGTI 171

Query: 214 VGGHAGVTILPLLSQV----KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 269
           +G H G   +P+ S+V      P  F+ +E E L   +Q    +V+E K   G+     A
Sbjct: 172 LGEH-GDAQVPVFSKVSVDGTDP-EFSGDEKEQLLGDLQESAMDVIERK---GATEWGPA 226

Query: 270 YAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 319
                  +A L            L G+ G  +             F   V LG  G EEI
Sbjct: 227 RGVAHMVEAILHDTGEVLPASVKLEGEFGHEDT-----------AFGVPVSLGSNGVEEI 275

Query: 320 FQLGPLNEYERIGLEKAKKELAGSIQK 346
            +   L++YE+  +  A ++L+    K
Sbjct: 276 VEW-DLDDYEQDLMADAAEKLSDQYDK 301

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* Length = 313

 Score =  145 bits (369), Expect = 3e-41
 Identities = 73/331 (22%), Positives = 138/331 (41%), Gaps = 50/331 (15%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGF- 97
           KV I+GA+G +G   A+L+   P +  L L    +      G+  DI             
Sbjct: 2   KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYD---ALAGTRSD 58

Query: 98  ----LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT 153
               +   +    +   D+VII +GVPRK GM+R DL   NA IV    + IA+ C    
Sbjct: 59  ANIYVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTK- 117

Query: 154 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVP 212
           + +I+NPV+    +          ++  ++ G+ T LD +R    +A+  G+   +V   
Sbjct: 118 IFVITNPVD----VMTYKALVDSKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRTR 173

Query: 213 VVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 265
           ++G H G +++PLLS        ++    F +   + +   ++  G +++  K   G + 
Sbjct: 174 IIGEH-GDSMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIRLK---GGSE 229

Query: 266 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 315
              A A +      +            + G+   +    +      +P     V++GR G
Sbjct: 230 FGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRDVCIG-----VP-----VKIGRDG 279

Query: 316 AEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
            EE+  +  L++ E I   K+ + +    ++
Sbjct: 280 IEEVVSI-ELDKDEIIAFRKSAEIIKKYCEE 309

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} Length = 314

 Score =  144 bits (366), Expect = 9e-41
 Identities = 79/325 (24%), Positives = 143/325 (44%), Gaps = 44/325 (13%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           KV ++GA G +G  +A  +    +   + + D+ +    G   D+      + + GF  +
Sbjct: 2   KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRE---SSPIHGFDTR 57

Query: 101 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
               N        D+ II AG+PR PGM+RDDL   N  IV  + E   +  P++T+ ++
Sbjct: 58  VTGTNDYGPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVV 117

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           +NP++    +   V  +A  +   +++G+  +LD  R  +F+AE L +  RDV   ++GG
Sbjct: 118 ANPLD----VMTYVAYEASGFPTNRVMGMAGVLDTGRFRSFIAEELDVSVRDVQALLMGG 173

Query: 217 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 271
           H G T++PL         P          E +  R +  G E+V+      SA  +   A
Sbjct: 174 H-GDTMVPLPRYTTVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM--GTSAWYAPGAA 230

Query: 272 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 321
           A +  +A L+             G+ G+ +            F    V+LG  G EE+ +
Sbjct: 231 AAEMTEAILKDNKRILPCAAYCDGEYGLDDL-----------FIGVPVKLGAGGVEEVIE 279

Query: 322 LGPLNEYERIGLEKAKKELAGSIQK 346
           +  L+  E+  L+ +   +  ++  
Sbjct: 280 V-DLDADEKAQLKTSAGHVHSNLDD 303

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} Length = 315

 Score =  144 bits (365), Expect = 1e-40
 Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 46/327 (14%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA----DISHMDTGAVVRGFL 98
           KV+++GA G  G   A L+    L  V+ L D+      T     D+      + V+GF 
Sbjct: 10  KVSVIGA-GFTGATTAFLLAQKELADVV-LVDIPQLENPTKGKALDMLE---ASPVQGFD 64

Query: 99  GQPQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
                 +        D+V+I AG+ RKPGM+RDDL   N+ I++++   IAK  PNA + 
Sbjct: 65  ANIIGTSDYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIV 124

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
           +++NPV+           K   +  ++++G   +LD  R  TF+A+ L L  +D+   V+
Sbjct: 125 VLTNPVD----AMTYSVFKEAGFPKERVIGQSGVLDTARFRTFIAQELNLSVKDITGFVL 180

Query: 215 GGHAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 269
           GGH G  ++PL+        P  +   +E  E +  R + GG E+V    G GSA  + A
Sbjct: 181 GGH-GDDMVPLVRYSYAGGIPLETLIPKERLEAIVERTRKGGGEIVG-LLGNGSAYYAPA 238

Query: 270 YAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 319
            + V+  +A L+           L G+ G  +            +    V LG  G E+I
Sbjct: 239 ASLVEMTEAILKDQRRVLPAIAYLEGEYGYSDL-----------YLGVPVILGGNGIEKI 287

Query: 320 FQLGPLNEYERIGLEKAKKELAGSIQK 346
            +L  L   E+  L+++ + +   ++ 
Sbjct: 288 IEL-ELLADEKEALDRSVESVRNVMKV 313

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* Length = 310

 Score =  143 bits (363), Expect = 2e-40
 Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 43/325 (13%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+ ++GA G +G   A  +    L   L L DVV     G   D+        V  F  +
Sbjct: 2   KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYE---SGPVGLFDTK 57

Query: 101 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
               N        D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N  + ++
Sbjct: 58  VTGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV 117

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           SNP++    I   V         ++++G+  +LD  R  +F+A  LG+  +D++  V+GG
Sbjct: 118 SNPLD----IMTHVAWVRSGLPKERVIGMAGVLDAARFRSFIAMELGVSMQDINACVLGG 173

Query: 217 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 271
           H G  ++P++        P       E  + L  R +NGG E+VE     GSA  + A +
Sbjct: 174 H-GDAMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEH-LKQGSAFYAPASS 231

Query: 272 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 321
            V+  ++ +            L G  G+ +          +P     V+LGR G E+I++
Sbjct: 232 VVEMVESIVLDRKRVLPCAVGLEGQYGIDKTFV------GVP-----VKLGRNGVEQIYE 280

Query: 322 LGPLNEYERIGLEKAKKELAGSIQK 346
           +  L++ +   L+K+ K +  + + 
Sbjct: 281 I-NLDQADLDLLQKSAKIVDENCKM 304

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} Length = 308

 Score =  143 bits (362), Expect = 3e-40
 Identities = 74/327 (22%), Positives = 134/327 (40%), Gaps = 51/327 (15%)

Query: 44  VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQP 101
           + ILGA G +G   A+++ +     +L L         G   D++H    A   G   + 
Sbjct: 2   ITILGA-GKVGMATAVMLMMRGYDDLL-LIARTPGKPQGEALDLAH---AAAELGVDIRI 56

Query: 102 QLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158
              N    + G D+V++ AG+ RKPGMTR+ L   NA  +  L E I     +A V + +
Sbjct: 57  SGSNSYEDMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT 116

Query: 159 NPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGH 217
           NPV+        V  K   +  ++++G   +LD  R   ++++ LG+  + V+  V+G H
Sbjct: 117 NPVD----AMTYVMYKKTGFPRERVIGFSGILDSARMAYYISQKLGVSFKSVNAIVLGMH 172

Query: 218 AGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGA-----GSATLS 267
            G  + P+         P     ++EE E + +   N G ++ E +  +      +  + 
Sbjct: 173 -GQKMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITELRGYSSNYGPAAGLVL 231

Query: 268 MAYAAVKFAD--------ACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEI 319
              A  +  D          L+G  G   +                     +G+ G E I
Sbjct: 232 TVEAIKR--DSKRIYPYSLYLQGEYGYNDI--------------VAEVPAVIGKSGIERI 275

Query: 320 FQLGPLNEYERIGLEKAKKELAGSIQK 346
            +L PL E E+   ++A + +   ++ 
Sbjct: 276 IEL-PLTEDEKRKFDEAVQAVKKLVET 301

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* Length = 309

 Score =  142 bits (361), Expect = 4e-40
 Identities = 85/325 (26%), Positives = 142/325 (43%), Gaps = 44/325 (13%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K++I+GA G +G   A  +    L  ++ L D+V     G   D+      + + GF  +
Sbjct: 4   KISIIGA-GFVGSTTAHWLAAKELGDIV-LLDIVEGVPQGKALDLYE---ASPIEGFDVR 58

Query: 101 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
               N        D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + ++
Sbjct: 59  VTGTNNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV 118

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           +NP++        +  +   +  ++++G   +LD  R  TF+A   G+   DV   ++GG
Sbjct: 119 NNPLD----AMTYLAAEVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGG 174

Query: 217 HAGVTILPLLSQV----KPPCSF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA 271
           H G  ++PL         P   F   +    +  R + GG E+V      GSA  + A A
Sbjct: 175 H-GDEMVPLPRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLL-KTGSAYYAPAAA 232

Query: 272 AVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQ 321
             +  +A L+           L G  G+ +            +F   V LG  G E+I +
Sbjct: 233 TAQMVEAVLKDKKRVMPVAAYLTGQYGLNDI-----------YFGVPVILGAGGVEKILE 281

Query: 322 LGPLNEYERIGLEKAKKELAGSIQK 346
           L PLNE E   L  + K +  ++  
Sbjct: 282 L-PLNEEEMALLNASAKAVRATLDT 305

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} Length = 328

 Score =  141 bits (359), Expect = 1e-39
 Identities = 98/330 (29%), Positives = 148/330 (44%), Gaps = 49/330 (14%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K++I+GA G IG  +A+L+    L  V  ++D++     G   D++H      + G   +
Sbjct: 16  KISIIGA-GQIGSTIALLLGQKDLGDVY-MFDIIEGVPQGKALDLNH---CMALIGSPAK 70

Query: 101 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
              EN    L   D+VII AGVPRKP MTR DL  +NA IV ++ E + K CPNA V  I
Sbjct: 71  IFGENNYEYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICI 130

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           +NP++         FK+       K+ G+  +LD  R    ++  LG+ P DV   VVGG
Sbjct: 131 TNPLD----AMVYYFKEKSGIPANKVCGMSGVLDSARFRCNLSRALGVKPSDVSAIVVGG 186

Query: 217 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266
           H G  ++PL          LS        T  +   +  +   GG E+VE     GSA  
Sbjct: 187 H-GDEMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELL-KTGSAFY 244

Query: 267 SMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 316
           + A +AV  A A L+           L G   V              F    V +G+ G 
Sbjct: 245 APAASAVAMAQAYLKDSKSVLVCSTYLTGQYNVNNL-----------FVGVPVVIGKNGI 293

Query: 317 EEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
           E++  +  L++ E+    K+ + +   +Q 
Sbjct: 294 EDVVIV-NLSDDEKSLFSKSVESIQNLVQD 322

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A Length = 317

 Score =  140 bits (356), Expect = 2e-39
 Identities = 89/330 (26%), Positives = 148/330 (44%), Gaps = 49/330 (14%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+A++G+ G IG  +A ++  + L  V+ L+D+      G   DI+H     V+ G   +
Sbjct: 6   KIAVIGS-GQIGGNIAYIVGKDNLADVV-LFDIAEGIPQGKALDITH---SMVMFGSTSK 60

Query: 101 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
               +    ++G D+VII A +P +P   R +L   NA I+ ++ EG+ K CPNA V  I
Sbjct: 61  VIGTDDYADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICI 120

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           +NP++    +    F+K       K+ G+  +LD  R  TF+A+  G++  DV   V+GG
Sbjct: 121 TNPLD----VMVSHFQKVSGLPHNKVCGMAGVLDSSRFRTFIAQHFGVNASDVSANVIGG 176

Query: 217 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266
           H G  ++P           LS        TQE+ + +    +    EV +     G+A  
Sbjct: 177 H-GDGMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNL-KTGTAYF 234

Query: 267 SMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 316
           + A AAVK A+A L+                GV            +P       +G+ G 
Sbjct: 235 APAAAAVKMAEAYLKDKKAVVPCSAFCSNHYGVKGIYM------GVP-----TIIGKNGV 283

Query: 317 EEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
           E+I +L  L   E+  L ++  E+    + 
Sbjct: 284 EDILEL-DLTPLEQKLLGESINEVNTISKV 312

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* Length = 324

 Score =  138 bits (351), Expect = 2e-38
 Identities = 94/330 (28%), Positives = 155/330 (46%), Gaps = 49/330 (14%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+A++G+ G IG  LA L  +  L  V+ L+D+      G   DI+     + V GF  +
Sbjct: 9   KIALIGS-GMIGGTLAHLAGLKELGDVV-LFDIAEGTPQGKGLDIAE---SSPVDGFDAK 63

Query: 101 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
               N   A+ G D+VI+ AGVPRKPGM+RDDL  IN  ++  +  GI K  P A V  I
Sbjct: 64  FTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICI 123

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           +NP++          +K       K++G+  +LD  R   F++E   +   DV V V+GG
Sbjct: 124 TNPLD----AMVWALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVTVFVLGG 179

Query: 217 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266
           H G +++PL          L  +      +Q++ + +  R ++GG E+V      GSA  
Sbjct: 180 H-GDSMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLL-KTGSAFY 237

Query: 267 SMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGA 316
           + A +A++ A++ L+           L G  GV +            +      +G  G 
Sbjct: 238 APAASAIQMAESYLKDKKRVLPVAAQLSGQYGVKDM-----------YVGVPTVIGANGV 286

Query: 317 EEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
           E I ++  L++ E+   +K+   +AG  + 
Sbjct: 287 ERIIEI-DLDKDEKAQFDKSVASVAGLCEA 315

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* Length = 331

 Score =  138 bits (350), Expect = 3e-38
 Identities = 90/336 (26%), Positives = 146/336 (43%), Gaps = 55/336 (16%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF--- 97
           KVA++G+ G IG  +  L  +  L  V+ LYDVV     G   D+SH      V      
Sbjct: 11  KVAMIGS-GMIGGTMGYLCALRELADVV-LYDVVKGMPEGKALDLSH---VTSVVDTNVS 65

Query: 98  -LGQPQLENALTGMDLVIIPAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPN 151
              +   E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP 
Sbjct: 66  VRAEYSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPK 125

Query: 152 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVD 210
             + +++NP++       +V  +A       + G+  MLD  R   +VA+ L + PRDV 
Sbjct: 126 TFIIVVTNPLD----CMVKVMCEASGVPTNMICGMACMLDSGRFRRYVADALSVSPRDVQ 181

Query: 211 VPVVGGHAGVTILPLLSQVK----------PPCSFTQEETEYLTNRIQNGGTEVVEAKAG 260
             V+G H G  ++PL+  +                T+++ E +    +  G E+V    G
Sbjct: 182 ATVIGTH-GDCMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVRFL-G 239

Query: 261 AGSATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVR 310
            GSA  + A +AV  A + L              G+ G+ +            F      
Sbjct: 240 QGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYGLKDM-----------FIGLPAV 288

Query: 311 LGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
           +G  G E + +L  LNE E+   +K+  ++    + 
Sbjct: 289 IGGAGIERVIEL-ELNEEEKKQFQKSVDDVMALNKA 323

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* Length = 316

 Score =  137 bits (348), Expect = 4e-38
 Identities = 68/335 (20%), Positives = 125/335 (37%), Gaps = 54/335 (16%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           +V ++GA G +G      +    +   + L D       G   D +H   G V   F  +
Sbjct: 8   RVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNH---GKV---FAPK 60

Query: 101 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           P              DLV+I AG  +KPG TR DL + N  I R++ E +          
Sbjct: 61  PVDIWHGDYDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFL 120

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
           + +NPV+    I      K      ++++G  T+LD  R    + E   + P++V   ++
Sbjct: 121 VATNPVD----ILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYII 176

Query: 215 GGH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 264
           G H        +   I  +P+   V+      Q++ E +   +++   +++E K   G+ 
Sbjct: 177 GEHGDTELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIEKK---GAT 233

Query: 265 TLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQ 314
              +A    +   A L            L G  G  +          +P       + R 
Sbjct: 234 YYGIAMGLARVTRAILHNENAILTVSAYLDGLYGERDVYI------GVP-----AVINRN 282

Query: 315 GAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 349
           G  E+ ++  LN+ E+     +   L   + +  +
Sbjct: 283 GIREVIEI-ELNDDEKNRFHHSAATLKSVLARAFT 316

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} Length = 321

 Score =  137 bits (348), Expect = 4e-38
 Identities = 96/331 (29%), Positives = 155/331 (46%), Gaps = 50/331 (15%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+ ++GA G IG  LA L  I  L  V+ L+D+      G   D+        + G   +
Sbjct: 7   KITLVGA-GNIGGTLAHLALIKQLGDVV-LFDIAQGMPNGKALDLLQ---TCPIEGVDFK 61

Query: 101 PQLEN---ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
            +  N    L   D+VI+ AGVPRKPGM+RDDL  IN  +++T+ EGI   CPNA V  I
Sbjct: 62  VRGTNDYKDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICI 121

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGG 216
           +NP++    I   + +K       K++G+  +LD  R  TF+A+ L +  + V   V+GG
Sbjct: 122 TNPLD----IMVNMLQKFSGVPDNKIVGMAGVLDSARFRTFLADELNVSVQQVQAYVMGG 177

Query: 217 HAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL 266
           H G T++PL          L Q+       QE  + + +R ++GG E+V      GSA  
Sbjct: 178 H-GDTMVPLTKMSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALL-KTGSAYY 235

Query: 267 SMAYAAVKFADACLRGLR-----------GDAGVVECAFVASQVTELPFFASKVRLGRQG 315
           + A A ++ A++ L+  +           G  G+ E  FV      +P       +   G
Sbjct: 236 APAAAGIQMAESFLKDKKMILPCAAKVKAGMYGLDEDLFVG-----VP-----TEISANG 285

Query: 316 AEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
              I ++  +++ ER  L+ +   +    + 
Sbjct: 286 VRPI-EV-EISDKEREQLQVSINAIKDLNKA 314

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* Length = 326

 Score =  136 bits (346), Expect = 1e-37
 Identities = 73/339 (21%), Positives = 129/339 (38%), Gaps = 54/339 (15%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           KVA++GA G +G   A  +    +   L + DV      G   D++H   G     F  Q
Sbjct: 7   KVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNH---GKA---FAPQ 59

Query: 101 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           P   +          D+V I AG  +KPG TR +L   N  I + +   +     +    
Sbjct: 60  PVKTSYGTYEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFL 119

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
           + +NPV+    I      K      ++++G  T LD  R    ++E  G  P++V   ++
Sbjct: 120 VATNPVD----ILTYATWKFSGLPKERVIGSGTTLDSARFRFMLSEYFGAAPQNVCAHII 175

Query: 215 GGH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 264
           G H        +   +  +P+   V+   ++ QEE + + + ++N    ++E K   G+ 
Sbjct: 176 GEHGDTELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIEKK---GAT 232

Query: 265 TLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQ 314
              +A +  +   A L            L G  G  +          +P       + R 
Sbjct: 233 YYGVAMSLARITKAILHNENSILTVSTYLDGQYGADDVYI------GVP-----AVVNRG 281

Query: 315 GAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           G   I +L  LNE E+     +   L   ++   +  K 
Sbjct: 282 GIAGITEL-NLNEKEKEQFLHSAGVLKNILKPHFAEQKV 319

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score =  135 bits (342), Expect = 3e-37
 Identities = 68/334 (20%), Positives = 128/334 (38%), Gaps = 54/334 (16%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           KV ++G  G +G   A  M    +     + DVV   T G   D+           F   
Sbjct: 7   KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLED---AQA---FTAP 59

Query: 101 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
            ++     +     DLV+I AG P+KPG +R DL N N  I+ ++ + +     +    +
Sbjct: 60  KKIYSGEYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLV 119

Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 215
            +NPV+    I      K   +  ++++G  T LD  R    + +   +DPR VD  ++G
Sbjct: 120 AANPVD----ILTYATWKFSGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIMG 175

Query: 216 GHAGVTILPLLSQVK----------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 265
            H G +     S                  + ++   L + ++N   +++  K   G+  
Sbjct: 176 EH-GDSEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIINLK---GATF 231

Query: 266 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 315
             +  A ++ + A LR           + G  G+ +           P       +G  G
Sbjct: 232 YGIGTALMRISKAILRDENAVLPVGAYMDGQYGLNDIYI------GTP-----AIIGGTG 280

Query: 316 AEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 349
            ++I +  PL+  E   ++ +   L   +  G++
Sbjct: 281 LKQIIES-PLSADELKKMQDSAATLKKVLNDGLA 313

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* Length = 326

 Score =  135 bits (342), Expect = 4e-37
 Identities = 70/334 (20%), Positives = 135/334 (40%), Gaps = 53/334 (15%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           KV ++G  G +G   A  M +  +   + + D+    T G   D+S+         F   
Sbjct: 11  KVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSN---ALP---FTSP 63

Query: 101 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
            ++     +     DLV+I AG P+KPG TR DL N N  I++++ + I     N    +
Sbjct: 64  KKIYSAEYSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV 123

Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 215
            +NPV+    I      K   +   +++G  T LD  R    +AE++ +D R V   ++G
Sbjct: 124 AANPVD----ILTYATWKLSGFPKNRVVGSGTSLDTARFRQSIAEMVNVDARSVHAYIMG 179

Query: 216 GH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 265
            H        +   I  + +   VK      +++   +   +++   E+++ K   G+  
Sbjct: 180 EHGDTEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIKLK---GATF 236

Query: 266 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 315
             +A A  + + A L            + G  G+ +           P       + R G
Sbjct: 237 YGIATALARISKAILNDENAVLPLSVYMDGQYGLNDIYI------GTP-----AVINRNG 285

Query: 316 AEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 349
            + I ++ PL ++E   ++K+  +L   +    +
Sbjct: 286 IQNILEI-PLTDHEEESMQKSASQLKKVLTDAFA 318

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... Length = 331

 Score =  134 bits (341), Expect = 4e-37
 Identities = 76/338 (22%), Positives = 144/338 (42%), Gaps = 57/338 (16%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+ ++G  G +G   A+ + +  L   L L DV+     G   D+ H   G++   FL  
Sbjct: 21  KITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQH---GSL---FLKT 73

Query: 101 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           P++ ++          LVII AG  ++ G +R +L   N  I + +   + K  P   + 
Sbjct: 74  PKIVSSKDYSVTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLL 133

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
           ++SNPV+    I   V  K   +   +++G    LD  R    + E LG+ P      V+
Sbjct: 134 IVSNPVD----ILTYVAWKISGFPKNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVL 189

Query: 215 GGHAGVTILPLLSQV------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 262
           G H G + +P+ S V            +      +E+ + +  ++ +   EV++ K   G
Sbjct: 190 GEH-GDSSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKLK---G 245

Query: 263 SATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLG 312
             + ++  +    A++ ++           ++G  G+ E  F++     +P       LG
Sbjct: 246 YTSWAIGLSVADLAESIMKNLRRVHPISTMIKGLYGIKEDVFLS-----VP-----CILG 295

Query: 313 RQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
           + G  ++ ++  L   E   L+K+   L G IQK + F
Sbjct: 296 QNGISDVVKV-TLTPDEEARLKKSADTLWG-IQKELQF 331

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* Length = 319

 Score =  134 bits (339), Expect = 9e-37
 Identities = 69/339 (20%), Positives = 126/339 (37%), Gaps = 59/339 (17%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+A++GA G +G  LA       +   + L D+          D+ H   G+    F   
Sbjct: 9   KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH---GSS---FYPT 61

Query: 101 PQLE-----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
             ++           D+V+I AG  +KPG +R +L      I++ +   + K  PNA   
Sbjct: 62  VSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYM 121

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
           LI+NPV+    IA  V +K       ++ G  T LD  R    +A+  G++ ++V   + 
Sbjct: 122 LITNPVD----IATHVAQKLTGLPENQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIA 177

Query: 215 GGH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 261
           G H              GV +               ++ E +   ++N   +++  K   
Sbjct: 178 GEHGDSEVPLWESATIGGVPMSDWTPLPGHDP-LDADKREEIHQEVKNAAYKIINGK--- 233

Query: 262 GSATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRL 311
           G+   ++  + V   +A L            L+   G+ +          +P       L
Sbjct: 234 GATNYAIGMSGVDIIEAVLHDTNRILPVSSMLKDFHGISDICM------SVP-----TLL 282

Query: 312 GRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
            RQG        P+++ E   L+++ + L         F
Sbjct: 283 NRQGVNNTINT-PVSDKELAALKRSAETLK-ETAAQFGF 319

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* Length = 322

 Score =  134 bits (339), Expect = 9e-37
 Identities = 84/335 (25%), Positives = 144/335 (42%), Gaps = 56/335 (16%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+ ++G+ G IG  +A L+    L  V+ L+D+V     G   D SH     V+     +
Sbjct: 6   KIVLVGS-GMIGGVMATLIVQKNLGDVV-LFDIVKNMPHGKALDTSH---TNVMAYSNCK 60

Query: 101 PQLEN---ALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNA 152
               N    L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA
Sbjct: 61  VSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 120

Query: 153 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDV 211
            + +++NPV+    +  ++  +       K++G+  +LD  R   ++++ L + PRDV+ 
Sbjct: 121 FIIVVTNPVD----VMVQLLHQHSGVPKNKIIGLGGVLDTSRLKYYISQKLNVCPRDVNA 176

Query: 212 PVVGGHAGVTILPL----------LSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 261
            +VG H G  ++ L          L +       +  E E + +R  N   E+V      
Sbjct: 177 HIVGAH-GNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLH--- 232

Query: 262 GSATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRL 311
            S  ++ A A ++ A++ L+           L G  G  +            F  + V L
Sbjct: 233 ASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSDI-----------FGGTPVVL 281

Query: 312 GRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
           G  G E++ +L  LN  E+   ++A  E       
Sbjct: 282 GANGVEQVIEL-QLNSEEKAKFDEAIAETKRMKAL 315

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 Length = 319

 Score =  133 bits (338), Expect = 1e-36
 Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 53/331 (16%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+ I+G  G +G   A  + +      + L DV      G   D+ H   G     F  +
Sbjct: 2   KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIH---GTP---FTRR 54

Query: 101 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
             +       L G D+VI+ AGVP+KPG TR  L   NA +++ +   ++K  P++ V +
Sbjct: 55  ANIYAGDYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV 114

Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 215
           ++NPV+    +    F K    DP+K+ G  T+LD  R  T +A+  G  PR V V V+G
Sbjct: 115 VTNPVD----VLTYFFLKESGMDPRKVFGSGTVLDTARLRTLIAQHCGFSPRSVHVYVIG 170

Query: 216 GH--------AGVTI--LPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT 265
            H        +G  I  +PL +  +       +  E    + +    E++E K   G+  
Sbjct: 171 EHGDSEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIERK---GATH 227

Query: 266 LSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQG 315
            ++A A     ++              L    GV +          +P     V LG+ G
Sbjct: 228 YAIALAVADIVESIFFDEKRVLTLSVYLEDYLGVKDLCI------SVP-----VTLGKHG 276

Query: 316 AEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
            E I +L  LNE E     K+   L  +I +
Sbjct: 277 VERILEL-NLNEEELEAFRKSASILKNAINE 306

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* Length = 317

 Score =  133 bits (337), Expect = 1e-36
 Identities = 69/332 (20%), Positives = 126/332 (37%), Gaps = 55/332 (16%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           KV ++G  G +G   A  +    +V  L + D+      G   D+ H         +   
Sbjct: 8   KVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATP------YSPT 60

Query: 101 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
                A         DLV+I AG  +KPG TR DL + N  I +++   +     +    
Sbjct: 61  TVRVKAGEYSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFL 120

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
           + +NPV+    I A    K      ++++G  T+LD  R    ++E   + PR VD  ++
Sbjct: 121 VATNPVD----ILAYATWKFSGLPKERVIGSGTILDSARFRLLLSEAFDVAPRSVDAQII 176

Query: 215 GGHAGVTILPLLSQVK----------PPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSA 264
           G H G T LP+ S                   + + E +  + ++   ++++AK   G+ 
Sbjct: 177 GEH-GDTELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQAK---GAT 232

Query: 265 TLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQ 314
              +A    +  +A  R           L G+    +          +P       + R 
Sbjct: 233 YYGVAMGLARITEAIFRNEDAVLTVSALLEGEYEEEDVYI------GVP-----AVINRN 281

Query: 315 GAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
           G   + ++ PLN+ E+     + K L   + +
Sbjct: 282 GIRNVVEI-PLNDEEQSKFAHSAKTLKDIMAE 312

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A Length = 310

 Score =  133 bits (337), Expect = 1e-36
 Identities = 69/337 (20%), Positives = 122/337 (36%), Gaps = 57/337 (16%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           KV I+G+ G +G   A  + +  +   + L D+          DI H         F   
Sbjct: 2   KVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP------FAHP 54

Query: 101 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
             +       L G   V++ AGV ++PG TR  L + NA +   +   + +  P A + +
Sbjct: 55  VWVWAGSYGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV 114

Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 215
            +NPV+    +  +V        P +++G  T+LD  R    +AE L + P+ V   V+G
Sbjct: 115 ATNPVD----VMTQVAYALSGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLG 170

Query: 216 GHAGVTILPLLSQV------------KPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGS 263
            H G + + + S                  + + E+   +   ++     ++E K   G+
Sbjct: 171 EH-GDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGK---GA 226

Query: 264 ATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGR 313
               +     +   A L                AGV+E +        LP       LG 
Sbjct: 227 TYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVAGVLEVSL------SLP-----RILGA 275

Query: 314 QGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
            G         L+  ER  L ++ + L       + F
Sbjct: 276 GGVAGTVYP-SLSPEERAALRRSAEILKE-AAFALGF 310

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* Length = 333

 Score =  131 bits (332), Expect = 8e-36
 Identities = 71/327 (21%), Positives = 123/327 (37%), Gaps = 41/327 (12%)

Query: 43  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP----GVTADISHMDTG 91
           +V + GAAG I   L        +  K  P++  L L D+        GV  ++   D  
Sbjct: 5   RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPII--LVLLDITPMMGVLDGVLMEL--QDCA 60

Query: 92  AV-VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP 150
              ++  +   + E A   +D+ I+   +PR+ GM R DL   N  I +     + K   
Sbjct: 61  LPLLKDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAK 120

Query: 151 NAT-VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 209
            +  V ++ NP N+    A+   K A +   +    +T LD  RA   +A  LG+   DV
Sbjct: 121 KSVKVIVVGNPANTNCLTAS---KSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTSDDV 177

Query: 210 DVPVVGGHAGVTILPLLSQ-----------VKPPCSFTQEETEYLTNRIQNGGTEVVEAK 258
              ++ G+   T  P ++            V                 +Q  G  V++A+
Sbjct: 178 KNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIKAR 237

Query: 259 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ-----VTELPFFASKVRLGR 313
               SA +S A A          G     G      + S      V +   ++  V +  
Sbjct: 238 -KLSSA-MSAAKAICDHVRDIWFG--TPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKD 293

Query: 314 QGAEEIFQLGPLNEYERIGLEKAKKEL 340
           +  + +  L P+N++ R  ++   KEL
Sbjct: 294 KTWKIVEGL-PINDFSREKMDLTAKEL 319

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 Length = 318

 Score =  131 bits (331), Expect = 9e-36
 Identities = 80/334 (23%), Positives = 141/334 (42%), Gaps = 58/334 (17%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           KVAI+GA G +G   A  M +    + L L DV      G   DI+H   G     F+GQ
Sbjct: 9   KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH---GLP---FMGQ 61

Query: 101 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
             L     + +   D++++ AG  RKPG TR DL   N  I + + + I K   +  + +
Sbjct: 62  MSLYAGDYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV 121

Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVG 215
           +SNPV+    I   + +K       K++G  T+LD +R    ++E LG+D ++V   ++G
Sbjct: 122 VSNPVD----IITYMIQKWSGLPVGKVIGSGTVLDSIRFRYLLSEKLGVDVKNVHGYIIG 177

Query: 216 GH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 262
            H             AG  I   +   K    FT+E+ + +   ++  G  +++ K   G
Sbjct: 178 EHGDSQLPLWSCTHIAGKNINEYIDDPKCN--FTEEDKKKIAEDVKTAGATIIKNK---G 232

Query: 263 SATLSMAYAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLG 312
           +    +A +     +  L+           + G  G+ + A        LP       + 
Sbjct: 233 ATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYGIEDVAI------SLP-----SIVN 281

Query: 313 RQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
            +G +E+ Q   L   E   L  + +++   + +
Sbjct: 282 SEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNE 314

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* Length = 375

 Score =  129 bits (327), Expect = 1e-34
 Identities = 67/323 (20%), Positives = 111/323 (34%), Gaps = 36/323 (11%)

Query: 43  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP----GVTADISHMDTG 91
            +A+ GAAG I   L        +  +  P+   L L     +     GV  ++   D+ 
Sbjct: 34  NIAVSGAAGMISNHLLFKLASGEVFGQDQPIA--LKLLGSERSFQALEGVAMEL--EDSL 89

Query: 92  AV-VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP 150
              +R              +D  ++    PR PGM R  L +IN  I     + +     
Sbjct: 90  YPLLREVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVAS 149

Query: 151 -NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDV 209
            N  V ++ NP N+   I     K A     K    +T LD  RA   +A   G+    V
Sbjct: 150 KNVKVLVVGNPCNTNALICL---KNAPDIPAKNFHALTRLDENRAKCQLALKAGVFYDKV 206

Query: 210 DVPVVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAG 262
               + G+   T +P           VK     T+   E  T  +Q  G  +++   G  
Sbjct: 207 SNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW-GRS 265

Query: 263 SATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ-----VTELPFFASKVRLGRQGAE 317
           SA  S A +      + +       G      V +      + E   F+   R    G  
Sbjct: 266 SA-ASTAVSIADAIKSLVTP--TPEGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDY 322

Query: 318 EIFQLGPLNEYERIGLEKAKKEL 340
           E+      +++    ++K++ EL
Sbjct: 323 ELATDVSNDDFLWERIKKSEAEL 345

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* Length = 327

 Score =  127 bits (320), Expect = 5e-34
 Identities = 82/321 (25%), Positives = 128/321 (39%), Gaps = 35/321 (10%)

Query: 43  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTPGVTADISHMDT----G 91
           +VA+ GAAG IG  L        ML K  P++  L L ++        +   M+      
Sbjct: 6   RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVI--LQLLEIPQAMKA-LEGVVMELEDCAF 62

Query: 92  AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN 151
            ++ G       + A    D  ++    PRK GM R DL  +N  I       +A+    
Sbjct: 63  PLLAGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKK 122

Query: 152 AT-VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD 210
              V ++ NP N+   IA    K A   +P+    +T LD  RA   +A+  G     + 
Sbjct: 123 DVKVLVVGNPANTNALIAY---KNAPGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIR 179

Query: 211 VPVVGGHAGVTILPLLSQV----KPPCSFTQEE--TEYLTNRIQNGGTEVVEAKAGAGSA 264
              V G+   T+ P L       +P       E   +     +   G  +++A+ GA SA
Sbjct: 180 RMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQAR-GASSA 238

Query: 265 TLSMAYAAVK-FADACLRGLRGDAGVVECAFVASQ----VTELPFFASKVRLGRQGAEEI 319
             S A AA++   D  L    GD   V  A V SQ    + E   ++  V   + GA  +
Sbjct: 239 -ASAANAAIEHIRDWALGTPEGD--WVSMA-VPSQGEYGIPEGIVYSFPVT-AKDGAYRV 293

Query: 320 FQLGPLNEYERIGLEKAKKEL 340
            +   +NE+ R  +E   +EL
Sbjct: 294 VEGLEINEFARKRMEITAQEL 314

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A Length = 303

 Score =  125 bits (315), Expect = 1e-33
 Identities = 55/321 (17%), Positives = 108/321 (33%), Gaps = 46/321 (14%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-NTPGVTADISHMDTGAVVRGFLGQP 101
           K+ ++G  G +G    + +    +   L L D+   T G T D+   +   V        
Sbjct: 16  KITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS----- 69

Query: 102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 161
           +  +A     +VI           +  D+   N  + R L   +     ++ + + S P 
Sbjct: 70  KDLSASAHSKVVIFTVN-SLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQP- 127

Query: 162 NSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGV 220
              V I   V  K  T+   +++G+   LD  R    +  VL       +V V+G   G 
Sbjct: 128 ---VEIMTYVTWKLSTFPANRVIGIGCNLDSQRLQYIITNVLKAQTSGKEVWVIGEQ-GE 183

Query: 221 TILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL 280
             +   S  +         +     ++ N   E++  K   G  + S+  +     D+ +
Sbjct: 184 DKVLTWSGQEE------VVSHTSQVQLSNRAMELLRVK---GQRSWSVGLSVADMVDSIV 234

Query: 281 RG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYE- 329
                        +G   +    F++     LP       LG  G  E+ +   L E   
Sbjct: 235 NNKKKVHSVSALAKGYYDINSEVFLS-----LP-----CILGTNGVSEVIKT-TLKEDTV 283

Query: 330 RIGLEKAKKELAGSIQKGISF 350
              L+ +   +   +Q+ +  
Sbjct: 284 TEKLQSSASSIHS-LQQQLKL 303

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} Length = 304

 Score =  124 bits (315), Expect = 2e-33
 Identities = 73/326 (22%), Positives = 123/326 (37%), Gaps = 48/326 (14%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           KV ++G  G +G   A  + +    S L L D           DI+H             
Sbjct: 2   KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHA------APVSHG 54

Query: 101 PQLE----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
            ++     + L    +VI+ AG  +KPG +R DL   NA I R L   I +  P+A + +
Sbjct: 55  TRVWHGGHSELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV 114

Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPK-KLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
            SNPV+    +  ++  +     P   ++G  T+LD  R    +A+  G+D       V+
Sbjct: 115 TSNPVD----LLTDLATQ---LAPGQPVIGSGTVLDSARFRHLMAQHAGVDGTHAHGYVL 167

Query: 215 GGH-------------AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGA 261
           G H             AG+ +   +     P  + ++    +    +N    ++E K   
Sbjct: 168 GEHGDSEVLAWSSAMVAGMPVADFMQAQNLP--WNEQVRAKIDEGTRNAAASIIEGK--- 222

Query: 262 GSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASK-VRLGRQGAEEIF 320
            +    +  A  +  +A LR  R          V++   E     S    +GRQG     
Sbjct: 223 RATYYGIGAALARITEAVLRDRR------AVLTVSAPTPEYGVSLSLPRVVGRQGVLSTL 276

Query: 321 QLGPLNEYERIGLEKAKKELAGSIQK 346
               L   E+  LE++   L G  Q+
Sbjct: 277 HP-KLTGDEQQKLEQSAGVLRGFKQQ 301

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A Length = 329

 Score =  125 bits (315), Expect = 2e-33
 Identities = 75/324 (23%), Positives = 116/324 (35%), Gaps = 39/324 (12%)

Query: 43  KVAILGAAGGIGQPLA-------MLMKINPLVSVLHLYDVVNTP------GVTADISHMD 89
           +VA+ GAAG I   L        ML K  P++  L L ++ N        GV  +I   D
Sbjct: 7   RVAVTGAAGQICYSLLFRIANGDMLGKDQPVI--LQLLEIPNEKAQKALQGVMMEI--DD 62

Query: 90  TGA-VVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC 148
               ++ G         A    D+ ++    PR PGM R DL   NA I     + I   
Sbjct: 63  CAFPLLAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAV 122

Query: 149 C-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPR 207
              N  V ++ NP N+   IA    K A +   K    +  LD  RA + +A   G    
Sbjct: 123 ASRNIKVLVVGNPANTNAYIAM---KSAPSLPAKNFTAMLRLDHNRALSQIAAKTGKPVS 179

Query: 208 DVDVPVVGGHAGVTILPLLSQ-------VKPPCSFTQEETEYLTNRIQNGGTEVVEAKAG 260
            ++   V G+   T+             VK   +      +     +   G  +++A+ G
Sbjct: 180 SIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR-G 238

Query: 261 AGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ----VTELPFFASKVRLGRQGA 316
             SA  S A AA+      + G  G         + S     + E   F   V     G 
Sbjct: 239 VSSA-ASAANAAIDHIHDWVLGTAGK--WTTMG-IPSDGSYGIPEGVIFGFPVTTEN-GE 293

Query: 317 EEIFQLGPLNEYERIGLEKAKKEL 340
            +I Q   ++ + +  +     EL
Sbjct: 294 YKIVQGLSIDAFSQERINVTLNEL 317

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ojs_A* 2x0i_A* 2x0j_A* Length = 294

 Score =  122 bits (309), Expect = 1e-32
 Identities = 68/322 (21%), Positives = 131/322 (40%), Gaps = 50/322 (15%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+  +GA G +G   A    +N  V  + L D+      G   D++H    A        
Sbjct: 2   KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAH---AAAGIDK--Y 55

Query: 101 PQLENA-----LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
           P++        L G +++++ AG+ RKPGMTR DL + NAGI++ + + I +  P + + 
Sbjct: 56  PKIVGGADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKIL 115

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
           +++NP++    +   +  K       ++ G+   LD  R    +      + R     ++
Sbjct: 116 VVTNPMD----VMTYIMWKESGKPRNEVFGMGNQLDSQRLKERLYNAGARNIRRAW--II 169

Query: 215 GGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK 274
           G H G ++    S         + + E + N ++    EV++ K   G+     A A  +
Sbjct: 170 GEH-GDSMFVAKSLADFDG---EVDWEAVENDVRFVAAEVIKRK---GATIFGPAVAIYR 222

Query: 275 FADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGP 324
              A +            L+G+ G+                    +LG+ GA E+  +  
Sbjct: 223 MVKAVVEDTGEIIPTSMILQGEYGIENV-----------AVGVPAKLGKNGA-EVADI-K 269

Query: 325 LNEYERIGLEKAKKELAGSIQK 346
           L++ E   L  + K L   +++
Sbjct: 270 LSDEEIEKLRNSAKILRERLEE 291

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 Length = 309

 Score =  119 bits (301), Expect = 2e-31
 Identities = 61/324 (18%), Positives = 112/324 (34%), Gaps = 42/324 (12%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           K+ I+G  G +G  +A  +    +       D           D             L  
Sbjct: 3   KIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDA------MANLEA 55

Query: 101 PQLENA-----LTGMDLVIIPAGVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPN 151
                      L   D+VI   G  +     P   R       + +V+++   + +   +
Sbjct: 56  HGNIVINDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFH 115

Query: 152 ATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVD 210
             + +ISNPV+    +   +F+    +   K++G  T+LD  R    V E   LDPR V 
Sbjct: 116 GVLVVISNPVD----VITALFQHVTGFPAHKVIGTGTLLDTARMQRAVGEAFDLDPRSVS 171

Query: 211 VPVVGGHAGVTILPLLSQV----KPPCSFTQEETEYLTN---RIQNGGTEVVEAKAGAGS 263
              +G H G +     S V    +P  +        L       + GG  V+  K   G 
Sbjct: 172 GYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNGK---GY 227

Query: 264 ATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASK-VRLGRQGAEEIFQL 322
            +  +A +A++ A A +              V+++  ++  + S    +GR G      L
Sbjct: 228 TSYGVATSAIRIAKAVMADAH------AELVVSNRRDDMGMYLSYPAIIGRDGVLAETTL 281

Query: 323 GPLNEYERIGLEKAKKELAGSIQK 346
             L   E+  L +++  +     +
Sbjct: 282 -DLTTDEQEKLLQSRDYIQQRFDE 304

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 Length = 330

 Score =  118 bits (299), Expect = 4e-31
 Identities = 64/332 (19%), Positives = 115/332 (34%), Gaps = 48/332 (14%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+ ++G    +G   A+ + +  L   + L DV+     G   D+ H   G++   FL  
Sbjct: 23  KITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEH---GSL---FLHT 75

Query: 101 PQLE-----NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
            ++      +   G  LV+I AG  ++ G +R +L   N  I + +   I K  P+    
Sbjct: 76  AKIVSGKDYSVSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKE 135

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTFVAEVLGLDPRDVDVPVV 214
           L             +   K       +++G    LD  R    + E LG+    V   V+
Sbjct: 136 LHPELGT----DKNKQDWKLSGLPMHRIIGSGCNLDSARFRYLMGERLGVHSCLVIGWVI 191

Query: 215 GGHAGVTILPLLSQV---KPPCSF--TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA 269
           G H G ++  + S +   K       +  E   L          VV       +      
Sbjct: 192 GQH-GDSVPSVWSGMWDAKLHKDVVDSAYEVIKLKGYTSWAIGLVVSNPVDVLTYVAWKG 250

Query: 270 YAAVKFADACLRG----------LRGDAGVVECAFVASQVTELPFFASKVRLGRQGAE-E 318
            +    A   ++           ++   G+ +  F++     LP       L    +   
Sbjct: 251 CSVADLAQTIMKDLCRVHPVSTMVKDFYGIKDNVFLS-----LP-----CVLNNGISHCN 300

Query: 319 IFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
           I ++  L   E   L+K+   L   IQK + F
Sbjct: 301 IVKM-KLKPDEEQQLQKSATTLW-DIQKDLKF 330

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 Length = 480

 Score = 53.7 bits (128), Expect = 4e-08
 Identities = 40/210 (19%), Positives = 64/210 (30%), Gaps = 45/210 (21%)

Query: 40  AGFKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPGVTADISHMDTG 91
              K+ I+GA G        ++ L K   L  S + L D+    ++     A     + G
Sbjct: 2   PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVG 60

Query: 92  AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT----------- 140
           A ++ F     L++ +   D VI  A V     + +        G  R            
Sbjct: 61  ADLK-FEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSD 119

Query: 141 ---------------LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 185
                          +   I K  P A     +NP+         +  +     P K +G
Sbjct: 120 YYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEG----TTLVTRTV---PIKAVG 172

Query: 186 VTMLDVVRANTFVAEVLGLDPRDVDVPVVG 215
                       + E LGL+   VD  V G
Sbjct: 173 FC--HGHYGVMEIVEKLGLEEEKVDWQVAG 200

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis} Length = 450

 Score = 51.3 bits (122), Expect = 2e-07
 Identities = 35/204 (17%), Positives = 64/204 (31%), Gaps = 28/204 (13%)

Query: 40  AGFKVAILGAAGGIG---QPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVR 95
              K+A +G  G  G     ++ L     +   + LYD+          I +       R
Sbjct: 4   DQIKIAYIGG-GSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNHSGNGRWR 62

Query: 96  GFLGQPQLENALTGMDLVIIPAGV------------PRKPGMTRDDLFNINAG------- 136
            +     L+ AL+  D+VII                P + G+ +     +  G       
Sbjct: 63  -YEAVSTLKKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLR 121

Query: 137 ---IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR 193
              I   +   I    P + V   +NP++    +  +VF           +  T   +  
Sbjct: 122 AVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVLYKVFPGIKAIGCCHEVFGTQKLLAE 181

Query: 194 ANTFVAEVLGLDPRDVDVPVVGGH 217
             T    +      D+ V V+G +
Sbjct: 182 MVTERLGIEVPRREDIRVNVLGIN 205

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 Length = 472

 Score = 50.9 bits (121), Expect = 3e-07
 Identities = 39/251 (15%), Positives = 75/251 (29%), Gaps = 42/251 (16%)

Query: 29  RQAKCRAKGGAAGFKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPG 80
                ++      F + I G  G    P   L +L  +    +  L LYD      +   
Sbjct: 16  ENLYFQSNMKKKSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIA 74

Query: 81  VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT 140
              D+   +    +  F      E A T +D V+    V +      D+   +  G+V  
Sbjct: 75  GACDVFIREKAPDIE-FAATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQ 133

Query: 141 --------------------LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP 180
                               + + + K  P+A +   SNP          +         
Sbjct: 134 ETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPN------ 187

Query: 181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET 240
            K+L +  +  V     +A++LGL  R     +   + G+      + ++       +  
Sbjct: 188 SKILNICDM-PVGIEDRMAQILGLSSRKE---MKVRYYGLNHFGWWTSIQDQE--GNDLM 241

Query: 241 EYLTNRIQNGG 251
             L   +   G
Sbjct: 242 PKLKEHVSQYG 252

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2 Length = 450

 Score = 45.5 bits (107), Expect = 1e-05
 Identities = 33/204 (16%), Positives = 63/204 (30%), Gaps = 37/204 (18%)

Query: 41  GFKVAILGA----AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-----DTG 91
             K+A +G        + + L       P V  L L D+         +  +     +  
Sbjct: 7   RLKIATIGGGSSYTPELVEGLIKRYHELP-VGELWLVDIPEGKEKLEIVGALAKRMVEKA 65

Query: 92  AVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRT----------- 140
            V            AL G D V     V       +D+   +  G++             
Sbjct: 66  GVPIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKG 125

Query: 141 ---------LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV 191
                    +   + + CP+A +   +NP            K+      +K++G+  +  
Sbjct: 126 LRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQ------EKVVGLCNV-P 178

Query: 192 VRANTFVAEVLGLDPRDVDVPVVG 215
           +     VA++LG+D   V +   G
Sbjct: 179 IGMRMGVAKLLGVDADRVHIDFAG 202

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 52/279 (18%), Positives = 83/279 (29%), Gaps = 86/279 (30%)

Query: 11  IARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVL 70
           ++R+  +L    L+   L + +  AK       V I G   G G       K     + +
Sbjct: 131 VSRLQPYL---KLRQ-ALLELR-PAKN------VLIDGV-LGSG-------K-----TWV 166

Query: 71  HLYDVVNTPGVTADISHMDTGAVVRGF---LGQPQLENALTGM--DL--VIIPAGVPRKP 123
            L DV  +  V      MD       F   L        +  M   L   I P    R  
Sbjct: 167 AL-DVCLSYKV---QCKMDFKI----FWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218

Query: 124 GM--TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK 181
                +  + +I A + R L     K   N    L+   V +     A+ +     ++  
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKS---KPYENCL--LVLLNVQN-----AKAWN---AFNLS 265

Query: 182 -KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET 240
            K+L +T        T          R   V      A  T + L        + T +E 
Sbjct: 266 CKIL-LT--------T----------RFKQVTDFLSAATTTHISL---DHHSMTLTPDEV 303

Query: 241 E-----YLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK 274
           +     YL  R Q       E         LS+   +++
Sbjct: 304 KSLLLKYLDCRPQ---DLPREVLTTNPRR-LSIIAESIR 338

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	353
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	100.0
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	100.0
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	100.0
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	100.0
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	100.0
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	100.0
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	100.0
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	100.0
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	100.0
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	100.0
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	100.0
3tl2_A	315	Malate dehydrogenase; center for structural genomi	100.0
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	100.0
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	100.0
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	100.0
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	100.0
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	100.0
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	100.0
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	100.0
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	100.0
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	100.0
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	100.0
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	100.0
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	100.0
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	100.0
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	100.0
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	100.0
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	100.0
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	100.0
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	100.0
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	100.0
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	100.0
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	100.0
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	100.0
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	100.0
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	100.0
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	100.0
1up7_A	417	6-phospho-beta-glucosidase; hydrolase, family4 hyd	100.0
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	100.0
1s6y_A	450	6-phospho-beta-glucosidase; hydrolase, structural	100.0
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	100.0
3fef_A	450	Putative glucosidase LPLD; gulosidase, structural	99.98
1obb_A	480	Maltase, alpha-glucosidase; glycosidase, sulfinic	99.96
3u95_A	477	Glycoside hydrolase, family 4; hydrolysis, cytosol	99.96
3ado_A	319	Lambda-crystallin; L-gulonate 3-dehydrogenase, str	98.77
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	98.62
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	98.44
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	98.42
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	98.42
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	98.42
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	98.37
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	98.37
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	98.3
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	98.28
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	98.26
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	98.26
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	98.24
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	98.23
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	98.22
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	98.21
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	98.21
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	98.2
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	98.19
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	98.18
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	98.17
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	98.17
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	98.17
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	98.16
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	98.16
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	98.16
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	98.16
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	98.15
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	98.15
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	98.14
4fgw_A	391	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi	98.14
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	98.14
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	98.14
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	98.13
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	98.13
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	98.13
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	98.12
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	98.12
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	98.11
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	98.09
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	98.09
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	98.07
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	98.05
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	98.05
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	98.04
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	98.04
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	98.04
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.03
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.03
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.99
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	97.98
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	97.97
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	97.96
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	97.96
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	97.96
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.95
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.94
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	97.94
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	97.94
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	97.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	97.91
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	97.9
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	97.89
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	97.89
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	97.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.88
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	97.88
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.87
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	97.87
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	97.86
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	97.84
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	97.84
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	97.84
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	97.83
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	97.82
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.82
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	97.81
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	97.81
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	97.8
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	97.8
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.8
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	97.79
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	97.79
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.79
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	97.78
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	97.78
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	97.78
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	97.77
1xq6_A	253	Unknown protein; structural genomics, protein stru	97.77
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.76
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	97.76
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	97.75
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	97.75
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	97.74
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.74
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	97.73
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	97.73
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	97.72
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.72
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	97.72
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.72
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	97.7
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.7
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	97.69
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.69
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.69
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	97.69
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	97.67
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	97.67
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	97.67
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	97.67
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	97.66
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.66
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	97.66
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	97.65
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	97.65
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	97.64
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	97.64
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.64
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	97.64
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	97.64
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	97.63
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	97.63
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	97.63
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	97.62
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.62
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.62
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.61
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.6
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	97.6
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	97.59
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.57
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	97.57
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	97.57
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	97.57
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.56
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.56
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	97.55
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.55
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.54
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	97.53
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	97.53
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.53
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.52
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	97.52
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	97.52
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	97.51
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	97.51
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	97.51
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	97.5
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.49
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.49
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	97.49
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	97.49
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	97.49
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	97.48
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.48
4f6c_A	427	AUSA reductase domain protein; thioester reductase	97.48
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.47
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.47
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	97.47
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	97.46
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.46
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.46
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	97.45
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.45
4ezb_A	317	Uncharacterized conserved protein; structural geno	97.44
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.44
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	97.44
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	97.44
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.43
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	97.43
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	97.43
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	97.43
1xq1_A	266	Putative tropinone reducatse; structural genomics,	97.43
1spx_A	278	Short-chain reductase family member (5L265); paral	97.43
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.42
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.41
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	97.41
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	97.41
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.41
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.4
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	97.4
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.4
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	97.39
3ego_A	307	Probable 2-dehydropantoate 2-reductase; structural	97.39
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.39
3c7a_A	404	Octopine dehydrogenase; L) stereospecific opine de	97.39
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.39
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.39
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.38
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.38
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.38
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	97.38
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.37
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.37
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	97.37
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	97.37
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.36
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.36
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.36
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	97.36
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	97.36
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.35
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	97.35
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	97.35
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	97.35
3rih_A	293	Short chain dehydrogenase or reductase; structural	97.35
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.34
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	97.34
3cxt_A	291	Dehydrogenase with different specificities; rossma	97.34
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	97.33
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.33
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.32
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.32
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	97.32
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	97.32
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	97.32
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.32
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.32
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.32
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.31
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	97.31
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.31
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.31
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.31
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.31
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.3
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.3
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	97.3
4f6l_B	508	AUSA reductase domain protein; thioester reductase	97.3
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	97.3
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.29
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	97.28
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	97.28
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	97.28
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	97.28
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.28
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.28
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	97.27
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.27
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	97.27
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.26
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	97.25
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	97.25
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	97.25
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.24
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	97.24
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	97.24
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	97.24
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	97.24
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	97.24
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.23
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.23
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.23
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	97.23
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.23
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.22
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.22
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.22
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	97.21
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	97.21
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	97.21
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	97.21
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	97.21
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.21
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	97.21
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	97.2
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.2
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	97.19
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	97.19
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.18
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	97.17
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	97.17
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.17
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	97.16
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.16
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.16
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.16
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.16
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	97.16
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	97.15
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.14
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.14
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	97.14
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.14
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.13
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.13
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	97.13
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	97.12
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	97.12
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.12
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	97.12
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	97.11
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.11
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	97.11
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	97.1
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	97.1
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	97.1
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.1
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.1
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.1
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.1
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	97.09
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	97.08
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.08
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.08
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	97.08
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	97.08
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	97.07
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.07
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.07
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	97.07
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	97.07
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	97.06
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.06
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	97.05
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.05
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.05
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.04
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.04
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.04
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	97.04
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.03
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.01
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.01
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.01
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.01
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	97.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.99
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.98
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.97
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.96
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.95
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	96.94
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.93
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.93
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.91
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	96.91
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.91
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.9
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.9
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.9
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.89
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.88
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.88
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.87
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.87
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	96.86
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.85
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.84
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.84
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	96.83
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.83
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.83
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.82
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.79
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.79
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.78
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.77
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.76
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.74
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	96.74
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.69
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.68
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.65
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.61
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.55
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.53
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.53
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.51
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.49
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.48
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.46
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.45
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.45
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	96.45
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	95.43
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	96.42
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.38
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	96.35
4e4y_A	244	Short chain dehydrogenase family protein; structur	96.35
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	96.34
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.33
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.32
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.3
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.3
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.28
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.28
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.26
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.22
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	96.22
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.21
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.13
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	96.11
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.09
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.05
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.05
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	96.0
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	95.98
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.98
1x7d_A	350	Ornithine cyclodeaminase; binds NAD+, binds L-orni	95.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.93
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.92
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	95.9
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.9
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	95.9
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.88
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.86
3eag_A	326	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME	95.85
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	95.84
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	95.83
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.82
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.79
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.78
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	95.75
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	95.73
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.72
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.72
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	95.64
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.62
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	95.6
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.59
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	95.56
3fr7_A	525	Putative ketol-acid reductoisomerase (OS05G057370	95.5
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	95.5
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.49
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.48
1ygy_A	529	PGDH, D-3-phosphoglycerate dehydrogenase; oxidored	95.48
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	95.44
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	95.43
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	95.43
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.42
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	95.41
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	95.39
1omo_A	322	Alanine dehydrogenase; two-domain, beta-sandwich-d	95.38
3hdj_A	313	Probable ornithine cyclodeaminase; APC62486, borde	95.38
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	95.38
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.32
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	95.31
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	95.28
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.25
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.22
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	95.22
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	95.21
1kyq_A	274	Met8P, siroheme biosynthesis protein Met8; homodim	95.2
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.18
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	95.18
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.18
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	95.15
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.11
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	95.11
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.08

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=100.00  E-value=4.2e-65  Score=485.68  Aligned_cols=308  Identities=54%  Similarity=0.844  Sum_probs=275.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||+||||+|+||+++++.|+++ ++..||+|+|+++ +.|.++||+|......+..+.+ ++.+++++|||+||+++|.
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~-~~~~~~~~~aDivii~ag~   79 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSG-EDATPALEGADVVLISAGV   79 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECS-SCCHHHHTTCSEEEECCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecC-CCcHHHhCCCCEEEEeCCC
Confidence            79999997799999999999887 7888999999987 7899999999864345555432 3346899999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC-CCCceEeechhhHHHHHHHH
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY-DPKKLLGVTMLDVVRANTFV  198 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~-~~~kviG~t~ld~~R~~~~l  198 (353)
                      |++|||+|.|++..|+++++++++.|.++||+++++++|||+|++|++++++ ++.+|+ |++||+|+|.||+.|+++++
T Consensus        80 ~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~t~~a~~~-~k~sg~~p~~rv~G~~~LD~~R~~~~l  158 (312)
T 3hhp_A           80 ARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEV-LKKAGVYDKNKLFGVTTLDIIRSNTFV  158 (312)
T ss_dssp             SCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHH-HHHTTCCCTTSEEECCHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhHHHHHHHH-HHHcCCCCcceEEEEechhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999986555 456677 99999999999999999999


Q ss_pred             HHHhCCCCCCCcceEEeec-CCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHH
Q 018618          199 AEVLGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD  277 (353)
Q Consensus       199 A~~l~v~~~~v~~~viG~h-g~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~  277 (353)
                      |+++|+++++|+++||||| |+ +++|+||++ .+..+++++|++|.++|++++++|++.|.|+|+++||+|.|++++++
T Consensus       159 a~~lgv~~~~v~~~V~G~Hsg~-t~vp~~S~~-~g~~~~~~~~~~i~~~v~~~g~eIi~~k~g~gst~~s~a~a~~~~~~  236 (312)
T 3hhp_A          159 AELKGKQPGEVEVPVIGGHSGV-TILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGL  236 (312)
T ss_dssp             HHHHTCCGGGCCCCEEECSSGG-GEEECGGGC-TTCCCCHHHHHHHHHHHHTHHHHHHHHTTTSCCCCHHHHHHHHHHHH
T ss_pred             HHHhCcChhHcceeEEeccCCC-ceeeecccC-CCCCCCHHHHHHHHHHHHhhhHHHHhhccCCCCchhHHHHHHHHHHH
Confidence            9999999999999999999 66 999999998 33357888999999999999999999766679999999999999999


Q ss_pred             HHHhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018618          278 ACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK  353 (353)
Q Consensus       278 ai~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~  353 (353)
                      +|+.+.++++.+++|++++|+.+.++|||+||++|++|+++++++++|+++|+++|++|++.|++.+++|++|+++
T Consensus       237 ai~~~l~~~~~v~~~s~~~g~g~~~v~~s~P~~~g~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~i~~g~~~~~~  312 (312)
T 3hhp_A          237 SLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK  312 (312)
T ss_dssp             HHHHHHTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHcCCCCceEEEEEecCCCCcceEEEeEEEEeCCEEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9954444445688998888764458999999999999999999966999999999999999999999999999875

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=100.00  E-value=1.4e-63  Score=476.74  Aligned_cols=311  Identities=57%  Similarity=0.938  Sum_probs=287.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||+||||+|+||++++..|+..++..+|+|+|+++.++.++||.|......++.+.+++|++++++|||+||+++|.|+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~~   80 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR   80 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcCC
Confidence            69999998899999999999998888899999998878899999997754456654334688889999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHH
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEV  201 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~  201 (353)
                      ++|++|.|++.+|+++++++++.|.+++|++|++++|||+|++|+++++++++.+++|++||+|+|.||+.|+++++|++
T Consensus        81 ~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNPv~~~~~i~~~~~~~~~~~p~~rvig~t~Ld~~r~~~~la~~  160 (314)
T 1mld_A           81 KPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFGVTTLDIVRANAFVAEL  160 (314)
T ss_dssp             CTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEECCHHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCCcchhHHHHHHHHHHcCCCCcceEEEeecccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999988888899999999999999999999999999999


Q ss_pred             hCCCCCCCcceEEeec-CCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHHHHH
Q 018618          202 LGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACL  280 (353)
Q Consensus       202 l~v~~~~v~~~viG~h-g~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~ai~  280 (353)
                      +|++|++|+++|||+| |+ +++|+||++++...+++++|+++.+++++++++|++.+.|+|+++|++|.++++++++|+
T Consensus       161 l~v~~~~v~~~v~G~H~G~-~~~p~~s~~~~~~~~~~~~~~~~~~~v~~~g~eii~~k~~~g~t~~~~a~a~~~~~~ai~  239 (314)
T 1mld_A          161 KGLDPARVSVPVIGGHAGK-TIIPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLV  239 (314)
T ss_dssp             TTCCGGGCBCCEEECSSGG-GEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCCHHHHHHHHHHHHHHH
T ss_pred             hCcChHhEEEEEccCCCCC-cEeeecccCCCcccCCHHHHHHHHHHHHHHHHHHHhhhcCCCCcchhHHHHHHHHHHHHH
Confidence            9999999999999999 67 999999999854458888899999999999999999887889999999999999999999


Q ss_pred             hccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 018618          281 RGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK  353 (353)
Q Consensus       281 ~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~~  353 (353)
                      +|+++++.++++++++|+|++++|||+||++|++|+++++++++|+++|+++|++|++.|++.++.+++|+++
T Consensus       240 ~~~~g~~~v~~~~~~~g~y~~~~~~~~P~~ig~~Gv~~i~~l~~l~~~e~~~l~~s~~~l~~~~~~~~~~~~~  312 (314)
T 1mld_A          240 DAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVKN  312 (314)
T ss_dssp             HHHHTCTTCEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCcCCCcceEEEEEeCCccCCceEEEEEEEEeCCeeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9976454588888899999889999999999999999998866999999999999999999999999999863

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=100.00  E-value=1.2e-63  Score=478.65  Aligned_cols=296  Identities=23%  Similarity=0.378  Sum_probs=265.3

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCC-eEEEEeCCCchhhhhCCCcEEEE
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~-~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      .+.+||+|||| |.||+++++.|+..+++++|+|+|+++  ++|.++||+|+...+ ..... .++|+ ++++|||+||+
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~~~d~-~~~~~aDiVvi   93 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIV-SSKDY-SVTANSKLVII   93 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEE-ECSSG-GGGTTEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEE-EcCCH-HHhCCCCEEEE
Confidence            45679999998 999999999999999989999999987  789999999985222 22222 24676 57999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      ++|.|++|||+|.|++.+|+++++++++.|.++||++|++++|||+|++|+++    ++.+++|++|+||+ |.||+.|+
T Consensus        94 ~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvdi~t~~~----~k~sg~p~~rviG~gt~LD~~R~  169 (331)
T 4aj2_A           94 TAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSNPVDILTYVA----WKISGFPKNRVIGSGCNLDSARF  169 (331)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEEECTTHHHHHHH
T ss_pred             ccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecChHHHHHHHH----HHHhCCCHHHEEeeccccHHHHH
Confidence            99999999999999999999999999999999999999999999999998654    67789999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCC
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  262 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg  262 (353)
                      ++++|+++|+++++|+++||||||+ +++|+||++++.+            .+++++|++|.+++++++++|++.   ||
T Consensus       170 ~~~la~~lgv~~~~V~~~ViGeHG~-s~vp~~S~~~v~G~p~~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~---kg  245 (331)
T 4aj2_A          170 RYLMGERLGVHPLSCHGWVLGEHGD-SSVPVWSGVNVAGVSLKSLNPQLGTDADKEQWKDVHKQVVDSAYEVIKL---KG  245 (331)
T ss_dssp             HHHHHHHHTSCGGGCBCCEEBCSST-TCEECGGGCEETTEEHHHHCTTTTSTTCTTCTHHHHHHHHHHHHHHHHH---HS
T ss_pred             HHHHHHHhCCCHHHCEEeEEecCCC-ceeEeeecCeECCEEHHHHHhhccCCCCHHHHHHHHHHHHHhHHHHhhc---CC
Confidence            9999999999999999999999999 9999999998632            235677999999999999999995   48


Q ss_pred             cccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHH
Q 018618          263 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE  339 (353)
Q Consensus       263 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~  339 (353)
                      +++||+|.++++++++|++|.+   .++|++ +++|+|  ++++|||+||++|++|+++++++ +|+++|+++|++|++.
T Consensus       246 ~t~~a~a~a~a~~~~ail~d~~---~~~~vs~~~~g~ygi~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~  321 (331)
T 4aj2_A          246 YTSWAIGLSVADLAESIMKNLR---RVHPISTMIKGLYGIKEDVFLSVPCILGQNGISDVVKV-TLTPDEEARLKKSADT  321 (331)
T ss_dssp             SCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTGGGCCSCCEEEEEEEEETTEEEEEECC-CCCHHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHhCCC---CeEEEEEecCCccCCcCceEEEEEEEEcCCeeEEEccC-CCCHHHHHHHHHHHHH
Confidence            8999999999999999999865   588886 789998  56999999999999999999995 9999999999999999


Q ss_pred             HHHHHHHhhhh
Q 018618          340 LAGSIQKGISF  350 (353)
Q Consensus       340 l~~~~~~~~~~  350 (353)
                      |++ ++++++|
T Consensus       322 l~~-~~~~~~~  331 (331)
T 4aj2_A          322 LWG-IQKELQF  331 (331)
T ss_dssp             HHH-HHTTCCC
T ss_pred             HHH-HHhhcCC
Confidence            997 6677654

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=100.00  E-value=8.5e-63  Score=465.41  Aligned_cols=282  Identities=23%  Similarity=0.363  Sum_probs=255.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC----CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      |||+|||| |+||+++++.|+.+++++||+|+|+++  ++|.++||+|+..    .+.+..   ++|+ ++++|||+||+
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~---~~d~-~~~~~aDvVvi   75 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GADY-SLLKGSEIIVV   75 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEE---ESCG-GGGTTCSEEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEec---CCCH-HHhCCCCEEEE
Confidence            89999998 999999999999999999999999988  7999999999642    233433   3565 78999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      +||.||+|||+|.|++..|+++++++++.+.++||+++++++|||+|++|+++    ++.+|+|++|+||+ |.||++||
T Consensus        76 tAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsNPvd~~t~i~----~k~sg~p~~rvig~gT~LDs~R~  151 (294)
T 2x0j_A           76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGKPRNEVFGMGNQLDSQRL  151 (294)
T ss_dssp             CCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH----HHHSSCCTTSEEECCHHHHHHHH
T ss_pred             ecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCcchhhHHhh----HHHcCCChhhEEEeeeEEeHHHH
Confidence            99999999999999999999999999999999999999999999999998764    68899999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHH
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK  274 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~  274 (353)
                      ++++++.+++++.  +++|||+||+ +++|+||++++.+.   .+++++.++++.++++|++   +||+++|++|.++++
T Consensus       152 ~~~l~~~~~~~~~--~~~V~G~HGd-t~vp~~S~~~v~g~---~~~~~i~~~~~~~g~eIi~---~kGst~~a~a~a~~~  222 (294)
T 2x0j_A          152 KERLYNAGARNIR--RAWIIGEHGD-SMFVAKSLADFDGE---VDWEAVENDVRFVAAEVIK---RKGATIFGPAVAIYR  222 (294)
T ss_dssp             HHHHHHTTCEEEC--CCCEEBCSST-TCEECGGGCCEESC---CCHHHHHHHHHTHHHHHHH---HHSSCCHHHHHHHHH
T ss_pred             HHHHhhcccCCcc--eeEEEecCCC-cEEEeeeccCCCCc---hhHHHHHHHHhhhheEEEe---cCcccchhHHHHHHH
Confidence            9999999987654  7899999999 99999999987442   3577888999999999999   458999999999999


Q ss_pred             HHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018618          275 FADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  346 (353)
Q Consensus       275 li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~  346 (353)
                      ++++|+++++   .++|++ +++|+| .+++|||+||++|++|+ +++++ +||++|+++|++|++.||+.+++
T Consensus       223 ~~~ail~d~~---~v~~~s~~l~g~yG~~~v~~s~P~~lg~~Gv-ei~~l-~L~~~E~~~l~~s~~~lk~~i~~  291 (294)
T 2x0j_A          223 MVKAVVEDTG---EIIPTSMILQGEYGIENVAVGVPAKLGKNGA-EVADI-KLSDEEIEKLRNSAKILRERLEE  291 (294)
T ss_dssp             HHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEE-EECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCC---cEEEEEEEEecCCCCccEEEEEEEEEeCCEE-EEeCC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999865   588887 789999 67999999999999998 58885 99999999999999999998865

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=100.00  E-value=4.9e-62  Score=464.92  Aligned_cols=297  Identities=26%  Similarity=0.462  Sum_probs=260.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||| |.||+++++.|++.+++++|+|+|+++  ++|.++||+|+..  ....+.. ++++ +++++|||+||+++
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~-~~~~-~~a~~~aDvVii~a   77 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVT-GTND-YGPTEDSDVCIITA   77 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEE-EESS-SGGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEE-ECCC-HHHhCCCCEEEECC
Confidence            79999998 999999999999999989999999988  7899999999742  1122322 1234 58999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec-hhhHHHHHH
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVVRANT  196 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t-~ld~~R~~~  196 (353)
                      |.|++|||+|.|++..|+++++++++.|.++||++|++++|||+|++|+++    ++.+|+|++||+|+| .||+.|+++
T Consensus        78 g~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~----~k~~g~p~~rviG~~t~LD~~R~~~  153 (314)
T 3nep_X           78 GLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVANPLDVMTYVA----YEASGFPTNRVMGMAGVLDTGRFRS  153 (314)
T ss_dssp             CC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCSSHHHHHHHH----HHHHTCCGGGEEECCHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCCchhHHHHHH----HHhcCCChHHEEeecCchHHHHHHH
Confidence            999999999999999999999999999999999999999999999999875    567899999999995 999999999


Q ss_pred             HHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHH
Q 018618          197 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYA  271 (353)
Q Consensus       197 ~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a  271 (353)
                      ++|+++|+++++|+++||||||+ +++|+||++++.+     .++++++++|.+++++++++|++.| |+ +++||+|.+
T Consensus       154 ~la~~lgv~~~~v~~~ViG~Hg~-t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eIi~~k-g~-sa~~a~a~a  230 (314)
T 3nep_X          154 FIAEELDVSVRDVQALLMGGHGD-TMVPLPRYTTVGGIPVPQLIDDARIEEIVERTKGAGGEIVDLM-GT-SAWYAPGAA  230 (314)
T ss_dssp             HHHHHHTCCGGGEEEEEEESSGG-GEEEEEEEEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SS-CCCHHHHHH
T ss_pred             HHHHHhCcCHHHeEEEEECCCCC-cEEeeeecCeECcEehhhccCHHHHHHHHHHHHHhHHHHHhcc-CC-cHHHHHHHH
Confidence            99999999999999999999999 9999999998743     2466778999999999999999976 44 899999999


Q ss_pred             HHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 018618          272 AVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS  349 (353)
Q Consensus       272 ~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~  349 (353)
                      +++++++|+++.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.++...+
T Consensus       231 ~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~lg~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~~~~~~  306 (314)
T 3nep_X          231 AAEMTEAILKDNK---RILPCAAYCDGEYGLDDLFIGVPVKLGAGGVEEVIEV-DLDADEKAQLKTSAGHVHSNLDDLQR  306 (314)
T ss_dssp             HHHHHHHHHHTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCC---eEEEEEEEeccccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999853   688987 799999 67999999999999999999996 99999999999999999999988766


Q ss_pred             hhc
Q 018618          350 FSK  352 (353)
Q Consensus       350 ~~~  352 (353)
                      +++
T Consensus       307 ~l~  309 (314)
T 3nep_X          307 LRD  309 (314)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            554

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=100.00  E-value=1.1e-60  Score=458.96  Aligned_cols=310  Identities=90%  Similarity=1.351  Sum_probs=282.5

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +++|||+||||+|+||++++..|+..+++.+|+|+|+++..+.++||.+......+..+.+++|++++++|||+||+++|
T Consensus         6 ~~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag   85 (326)
T 1smk_A            6 APGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAG   85 (326)
T ss_dssp             --CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCC
Confidence            45689999997699999999999988877799999987767788999986543356554345688899999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFV  198 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~l  198 (353)
                      .|+++|++|.+++..|+++++++++.+.+++|+++|+++|||+|++|+++++++++.+++|++||+|+|.||+.|+++++
T Consensus        86 ~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SNPv~~~~~~~t~~~~~~~~~p~~rviG~~~Ld~~r~~~~l  165 (326)
T 1smk_A           86 VPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTMLDVVRANTFV  165 (326)
T ss_dssp             CCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHHHHTCCCTTSEEECCHHHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCchHHHHHHHHHHHHHccCCCcccEEEEeehHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCcceEEeec-CCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHH
Q 018618          199 AEVLGLDPRDVDVPVVGGH-AGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD  277 (353)
Q Consensus       199 A~~l~v~~~~v~~~viG~h-g~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~  277 (353)
                      |+++|++|++|+++|||+| |+ +++|+||++++...+++++++++.+++++++++|++.+.|+|+++||+|.+++++++
T Consensus       166 a~~l~v~~~~v~~~v~G~H~G~-~~~p~~s~~~v~~~~~~~~~~~~~~~v~~~g~eii~~k~~~gs~~~~~a~a~~~~~~  244 (326)
T 1smk_A          166 AEVLGLDPRDVDVPVVGGHAGV-TILPLLSQVKPPSSFTQEEISYLTDRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD  244 (326)
T ss_dssp             HHHHTCCGGGCBCCEEECSSGG-GEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHTTTSCCCCHHHHHHHHHHHH
T ss_pred             HHHhCcChhheEEEEecccCCc-eEEEecccCeecCcCCHHHHHHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHHH
Confidence            9999999999999999999 77 999999999886668888899999999999999999766779999999999999999


Q ss_pred             HH---HhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 018618          278 AC---LRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK  352 (353)
Q Consensus       278 ai---~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~~~~  352 (353)
                      +|   ++|++   .++++++++|+|++++|||+||++|++|+++++++++|+++|+++|++|++.|++.++.+.+|+.
T Consensus       245 ai~~~~~~~~---~v~~~~~~~g~~~~~~~~~vP~~ig~~Gv~~i~~~~~L~~~e~~~l~~s~~~l~~~~~~~~~~~~  319 (326)
T 1smk_A          245 ACLRGLRGDA---GVIECAFVSSQVTELPFFASKVRLGRNGIEEVYSLGPLNEYERIGLEKAKKELAGSIEKGVSFIR  319 (326)
T ss_dssp             HHHHHHHTCS---CEEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHhCCCC---eEEEEEeeccccCCceEEEEEEEEeCCeeEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99   77654   58888888998888999999999999999999994499999999999999999999999998864

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=1.4e-62  Score=470.52  Aligned_cols=292  Identities=22%  Similarity=0.370  Sum_probs=245.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .++||+|||| |.||+++++.|+..+++++|+|+|+++  ++|.++||+|+... ..++..  +++ +++++|||+||++
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~--~~~-~~a~~~aDiVvi~   83 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIY--SAE-YSDAKDADLVVIT   83 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE--ECC-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEE--ECc-HHHhcCCCEEEEC
Confidence            4579999998 999999999999999989999999987  78999999998531 344443  235 5889999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  195 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~  195 (353)
                      +|.|++|||+|.|++.+|+++++++++.|.++||++|++++|||+|++|+++    ++.+++|++||||+ |.||+.|++
T Consensus        84 ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtNPvdi~t~~~----~k~~g~p~~rviG~gt~LD~~R~~  159 (326)
T 3vku_A           84 AGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYAT----WKLSGFPKNRVVGSGTSLDTARFR  159 (326)
T ss_dssp             CCCC----------------CHHHHHHHHHTTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECTTHHHHHHHH
T ss_pred             CCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccCchHHHHHHH----HHhcCCCHHHeeeecccCcHHHHH
Confidence            9999999999999999999999999999999999999999999999998654    67789999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-C----------CChHHHHHHHHHHhcchhhhhhhhccCCcc
Q 018618          196 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S----------FTQEETEYLTNRIQNGGTEVVEAKAGAGSA  264 (353)
Q Consensus       196 ~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-~----------~~~~~~~el~~~v~~~~~~i~~~~~gkg~~  264 (353)
                      +++|+++|+++++|+++||||||+ +++|+||++++.+ +          ++++++++|.+++++++++|++   +||++
T Consensus       160 ~~la~~lgv~~~~V~~~ViGeHGd-t~vp~~S~a~v~g~pl~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~---~kG~t  235 (326)
T 3vku_A          160 QSIAKMVNVDARSVHAYIMGEHGD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRNKAYEIIK---LKGAT  235 (326)
T ss_dssp             HHHHHHHTSCGGGEECCEEBSSST-TCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHH---HHSCC
T ss_pred             HHHHHHhCCCHHHCeEEEEcCCCC-eeEEeeeccccCCEEHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---cCCCc
Confidence            999999999999999999999999 9999999998753 1          1456789999999999999999   45899


Q ss_pred             cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018618          265 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG  342 (353)
Q Consensus       265 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~  342 (353)
                      +||+|.++++++++|+++.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++
T Consensus       236 ~~a~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~sa~~L~~  311 (326)
T 3vku_A          236 FYGIATALARISKAILNDEN---AVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKK  311 (326)
T ss_dssp             CHHHHHHHHHHHHHHHTTCC---EEEEEEEEEEEGGGEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHhcCCC---ceEEEEeeccCccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999743   688986 899999 56999999999999999999996 9999999999999999998


Q ss_pred             HHHHh
Q 018618          343 SIQKG  347 (353)
Q Consensus       343 ~~~~~  347 (353)
                      .++..
T Consensus       312 ~~~~~  316 (326)
T 3vku_A          312 VLTDA  316 (326)
T ss_dssp             C----
T ss_pred             HHHHH
Confidence            87765

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=100.00  E-value=6.4e-61  Score=458.91  Aligned_cols=297  Identities=32%  Similarity=0.496  Sum_probs=268.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC----CCeEEEEeCCCchhhhhCCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      +.+||+|||+ |.+|+++++.|+..++. +|+|+|+++  +++.++||+|...    ...+..   ++|+ ++++|||+|
T Consensus         4 ~~~kI~iiGa-G~vG~~~a~~l~~~~~~-~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~---t~d~-~a~~~aDvV   77 (321)
T 3p7m_A            4 ARKKITLVGA-GNIGGTLAHLALIKQLG-DVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG---TNDY-KDLENSDVV   77 (321)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESCG-GGGTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE---cCCH-HHHCCCCEE
Confidence            3579999998 99999999999999987 999999988  6788999999742    234443   3564 799999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec-hhhHH
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-MLDVV  192 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t-~ld~~  192 (353)
                      |+++|.|++||++|.|++.+|+++++++++.|.++||+++++++|||+|++|+++    ++.+++|++||+|+| .||+.
T Consensus        78 Ii~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtNPvd~~t~~~----~k~sg~p~~rviG~~~~LD~~  153 (321)
T 3p7m_A           78 IVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITNPLDIMVNML----QKFSGVPDNKIVGMAGVLDSA  153 (321)
T ss_dssp             EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEEECHHHHHH
T ss_pred             EEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHH----HHhcCCCHHHEEeeccchHHH
Confidence            9999999999999999999999999999999999999999999999999998654    677899999999995 99999


Q ss_pred             HHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCC
Q 018618          193 RANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  262 (353)
Q Consensus       193 R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg  262 (353)
                      |+++++|+++|+++++|+++|||+||+ +++|+||++++.+          .+++++++++.+++++++++|++.+ |+|
T Consensus       154 R~~~~la~~l~v~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~-g~g  231 (321)
T 3p7m_A          154 RFRTFLADELNVSVQQVQAYVMGGHGD-TMVPLTKMSNVAGVSLEQLVKEGKLKQERLDAIVSRTRSGGGEIVALL-KTG  231 (321)
T ss_dssp             HHHHHHHHHHTCCGGGEECCEEECSGG-GEEECTTTCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSS
T ss_pred             HHHHHHHHHhCcCHHHceEeeecCcCC-ceeeeeeeceECCEehhhhccccCCCHHHHHHHHHHHHhhhHHHHHhc-CCC
Confidence            999999999999999999999999999 9999999998743          1367788999999999999999987 889


Q ss_pred             cccchHHHHHHHHHHHHHhccCCCCeEEEee-eee-CCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHH
Q 018618          263 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVA-SQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKK  338 (353)
Q Consensus       263 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~-g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~  338 (353)
                      +++||+|.|+++++++|++|++   .++||+ +++ |+|  ++++|||+||++|++|++++ ++ +|+++|+++|++|++
T Consensus       232 sa~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~~g~ygi~~~v~~s~P~~~g~~Gv~~v-~l-~L~~~E~~~l~~s~~  306 (321)
T 3p7m_A          232 SAYYAPAAAGIQMAESFLKDKK---MILPCAAKVKAGMYGLDEDLFVGVPTEISANGVRPI-EV-EISDKEREQLQVSIN  306 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEECTTGGGCSSCEEEEEEEEEETTEEEEC-CC-CCCHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHcCCC---cEEEEEEEccCcccCCCCCeEEEEEEEEcCCEEEEe-CC-CCCHHHHHHHHHHHH
Confidence            9999999999999999999864   689997 788 898  55999999999999999999 85 999999999999999


Q ss_pred             HHHHHHHHhhhhhcC
Q 018618          339 ELAGSIQKGISFSKK  353 (353)
Q Consensus       339 ~l~~~~~~~~~~~~~  353 (353)
                      .|++.++....+++|
T Consensus       307 ~l~~~~~~~~~~l~~  321 (321)
T 3p7m_A          307 AIKDLNKAAAEILAK  321 (321)
T ss_dssp             HHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHhhC
Confidence            999999988777654

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=100.00  E-value=3.3e-61  Score=455.45  Aligned_cols=282  Identities=23%  Similarity=0.355  Sum_probs=257.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC--C--CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD--T--GAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~--~--~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      |||+|||| |.+|+++++.|+..+++++|+|+|+++  +++.++|++|..  .  ...+..   ++| +++++|||+||+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d-~~a~~~aDiVVi   75 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG---GAD-YSLLKGSEIIVV   75 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE---ESC-GGGGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE---eCC-HHHhCCCCEEEE
Confidence            79999999 999999999999999888999999988  678899998864  2  223443   356 689999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      ++|.|+++||+|.|++.+|+++++++++.|.++||+++++++|||+|++|+++    ++.++||++||+|+ |.||++|+
T Consensus        76 aag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsNPvd~~t~~~----~k~~g~p~~rviG~gt~LD~~R~  151 (294)
T 1oju_A           76 TAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGKPRNEVFGMGNQLDSQRL  151 (294)
T ss_dssp             CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH----HHHSCCCTTSEEECSHHHHHHHH
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcchHHHHHH----HHhcCCCHHHEeecccccHHHHH
Confidence            99999999999999999999999999999999999999999999999998654    67899999999999 89999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHH
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVK  274 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~  274 (353)
                      ++++| ++|++|++ +++||||||+ +++|+||++++.+ .+  ++++|.+++++++++|++.   ||+++||+|.++++
T Consensus       152 ~~~la-~l~v~~~~-~~~V~G~Hg~-t~vp~~s~~~v~g-~~--~~~~~~~~v~~~g~eii~~---kG~t~~~~a~a~~~  222 (294)
T 1oju_A          152 KERLY-NAGARNIR-RAWIIGEHGD-SMFVAKSLADFDG-EV--DWEAVENDVRFVAAEVIKR---KGATIFGPAVAIYR  222 (294)
T ss_dssp             HHHHH-HTTCBSCC-CCCEEBCSST-TCEECGGGCCCBS-CC--CHHHHHHHHHTTHHHHHHH---HSSCCHHHHHHHHH
T ss_pred             HHHHH-HhCCCccC-ceEEEecCCC-ceeeecccceECC-cC--hHHHHHHHHHHHHHHHHHh---cCCcchHHHHHHHH
Confidence            99999 99999999 9999999999 9999999999843 22  6889999999999999995   48999999999999


Q ss_pred             HHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018618          275 FADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  346 (353)
Q Consensus       275 li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~  346 (353)
                      ++++|++|.+   .++||+ +++|+| .+++|||+||++|++|++ ++++ +|+++|+++|++|++.|++.++.
T Consensus       223 ~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~-v~~l-~L~~~E~~~l~~s~~~l~~~~~~  291 (294)
T 1oju_A          223 MVKAVVEDTG---EIIPTSMILQGEYGIENVAVGVPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRERLEE  291 (294)
T ss_dssp             HHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEEE-ECCC-CCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCC---eEEEEEecccccCCCCceEEEEEEEEeCCEEE-EecC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999854   589997 899999 559999999999999999 9996 99999999999999999998875

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=100.00  E-value=2.9e-61  Score=461.43  Aligned_cols=298  Identities=31%  Similarity=0.492  Sum_probs=262.7

Q ss_pred             cCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC----CCeEEEEeCCCchhhhhCC
Q 018618           36 KGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        36 ~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~t~d~~~al~~  109 (353)
                      |+..+++||+|||| |.+|+++++.|+..++. +|+|+|+++  +++.++||.|...    ...+..   ++|+ ++++|
T Consensus         2 ~~~m~~~kI~viGa-G~vG~~~a~~l~~~~~~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~---t~d~-~a~~~   75 (324)
T 3gvi_A            2 PGSMARNKIALIGS-GMIGGTLAHLAGLKELG-DVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG---ANDY-AAIEG   75 (324)
T ss_dssp             ----CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE---ESSG-GGGTT
T ss_pred             CCCCcCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE---eCCH-HHHCC
Confidence            45566789999999 99999999999999986 999999988  6788999998742    234543   3576 89999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec-h
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-M  188 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t-~  188 (353)
                      ||+||+++|.|+++|++|.|++.+|+++++++++.|.++||+++++++|||+|++|+++    ++.+++|++|++|+| .
T Consensus        76 aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtNPvd~~t~~~----~k~sg~p~~rviG~~~~  151 (324)
T 3gvi_A           76 ADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWAL----QKFSGLPAHKVVGMAGV  151 (324)
T ss_dssp             CSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHH
T ss_pred             CCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCCCcHHHHHHH----HHhcCCCHHHEEeecCc
Confidence            99999999999999999999999999999999999999999999999999999998764    677899999999996 8


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhh
Q 018618          189 LDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAK  258 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~  258 (353)
                      ||+.|+++++|+++|+++++|+++|||+||+ +++|+||++++.+          .+++++++++.+++++++++|++.+
T Consensus       152 LD~~R~~~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~p~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~~  230 (324)
T 3gvi_A          152 LDSARFRYFLSEEFNVSVEDVTVFVLGGHGD-SMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLL  230 (324)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEECCEEECSGG-GEEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhCcCHHHCeEEEEcCCCC-ceeeehhhCeECCEEHHHhhhccCCCHHHHHHHHHHHHHhHHHHHHhc
Confidence            9999999999999999999999999999999 9999999998743          1366788999999999999999987


Q ss_pred             ccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHH
Q 018618          259 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA  336 (353)
Q Consensus       259 ~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s  336 (353)
                       |+|+++||+|.|+++++++|++|++   .++||+ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|
T Consensus       231 -gkgsa~~~~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s  305 (324)
T 3gvi_A          231 -KTGSAFYAPAASAIQMAESYLKDKK---RVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEI-DLDKDEKAQFDKS  305 (324)
T ss_dssp             -SSCCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHH
T ss_pred             -CCCcHHHHHHHHHHHHHHHHHcCCC---cEEEEEEEecCccCCCceEEEEEEEEeCCEEEEecCC-CCCHHHHHHHHHH
Confidence             8899999999999999999999864   689997 789999 56999999999999999999996 9999999999999


Q ss_pred             HHHHHHHHHHhhh
Q 018618          337 KKELAGSIQKGIS  349 (353)
Q Consensus       337 ~~~l~~~~~~~~~  349 (353)
                      ++.|++.++...+
T Consensus       306 ~~~l~~~~~~~~~  318 (324)
T 3gvi_A          306 VASVAGLCEACIG  318 (324)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999887654

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=100.00  E-value=1e-61  Score=464.99  Aligned_cols=292  Identities=23%  Similarity=0.320  Sum_probs=263.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      +++||+|||+ |.||+++++.|+..+++++|+|+|+++  +++.++||+|....  ..++.+  +++ +++++|||+||+
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~--~~~-~~a~~~aDvVvi   79 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTS--YGT-YEDCKDADIVCI   79 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEE--EEC-GGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEE--eCc-HHHhCCCCEEEE
Confidence            4679999998 999999999999999888999999987  68899999997321  234443  245 478999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      ++|.|+++|++|.|++..|+++++++++.+.++||++|++++|||+|++|+++    ++.+++|++|+||+ |.||+.|+
T Consensus        80 ~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtNPvd~~t~~~----~k~~g~p~~rviG~gt~LD~~R~  155 (326)
T 3pqe_A           80 CAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATNPVDILTYAT----WKFSGLPKERVIGSGTTLDSARF  155 (326)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECTTHHHHHHH
T ss_pred             ecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCChHHHHHHHH----HHhcCCCHHHEEeeccccHHHHH
Confidence            99999999999999999999999999999999999999999999999998664    67789999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----C-------CChHHHHHHHHHHhcchhhhhhhhccCCc
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S-------FTQEETEYLTNRIQNGGTEVVEAKAGAGS  263 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~-------~~~~~~~el~~~v~~~~~~i~~~~~gkg~  263 (353)
                      ++++|+++|+++++|+++||||||+ +++|+||++++.+    .       ++++++++|.+++++++++|++   +||+
T Consensus       156 ~~~la~~lgv~~~~V~~~V~GeHG~-t~vp~~S~~~v~g~p~~~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~---~kG~  231 (326)
T 3pqe_A          156 RFMLSEYFGAAPQNVCAHIIGEHGD-TELPVWSHANVGGVPVSELVEKNDAYKQEELDQIVDDVKNAAYHIIE---KKGA  231 (326)
T ss_dssp             HHHHHHHHTCCGGGEECCEEBSSST-TCEECGGGCEETTEEHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHH---HHSC
T ss_pred             HHHHHHHhCCCHHHceeeeeecCCC-ceeeeeeeeeECCEEHHHHhhcccCCCHHHHHHHHHHHHhhhheeee---CCCC
Confidence            9999999999999999999999999 9999999998743    1       2566789999999999999999   4589


Q ss_pred             ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618          264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  341 (353)
Q Consensus       264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~  341 (353)
                      ++||+|.|+++++++|++|.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus       232 t~~a~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~v~~s~P~~lg~~Gv~~iv~l-~L~~~E~~~l~~s~~~l~  307 (326)
T 3pqe_A          232 TYYGVAMSLARITKAILHNEN---SILTVSTYLDGQYGADDVYIGVPAVVNRGGIAGITEL-NLNEKEKEQFLHSAGVLK  307 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEECCEEEEESGGGCEEEEEECCEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhcCCC---cEEEEEEeeccccCCCceEEEEEEEEcCCceEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999753   688876 899999 56999999999999999999996 999999999999999999


Q ss_pred             HHHHHh
Q 018618          342 GSIQKG  347 (353)
Q Consensus       342 ~~~~~~  347 (353)
                      +.+++.
T Consensus       308 ~~~~~~  313 (326)
T 3pqe_A          308 NILKPH  313 (326)
T ss_dssp             HHHTTT
T ss_pred             HHHHHh
Confidence            988764

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=100.00  E-value=5.7e-61  Score=457.97  Aligned_cols=290  Identities=29%  Similarity=0.465  Sum_probs=263.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC--C--cHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV--N--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~--~--~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~ADi  112 (353)
                      .+||+|+|+ |.+|+++++.|+..++ ++|+|+|++  +  ++|.++|+.|..    ....+..   ++| +++++|||+
T Consensus         8 ~~kv~ViGa-G~vG~~ia~~l~~~g~-~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~---t~d-~~a~~~aDv   81 (315)
T 3tl2_A            8 RKKVSVIGA-GFTGATTAFLLAQKEL-ADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG---TSD-YADTADSDV   81 (315)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE---ESC-GGGGTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE---cCC-HHHhCCCCE
Confidence            469999998 9999999999999998 899999998  4  678889998864    2234554   346 488999999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhH
Q 018618          113 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV  191 (353)
Q Consensus       113 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~  191 (353)
                      ||+++|.|++|||+|.|++.+|+++++++++.+.++||++|++++|||+|++|+++    ++.+|+|++|++|+ |.||+
T Consensus        82 VIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsNPvd~~t~~~----~k~sg~p~~rviG~gt~LD~  157 (315)
T 3tl2_A           82 VVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTNPVDAMTYSV----FKEAGFPKERVIGQSGVLDT  157 (315)
T ss_dssp             EEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHHHHH
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCChHHHHHHHH----HHhcCCChHHEEeeccCcHH
Confidence            99999999999999999999999999999999999999999999999999999875    56789999999999 99999


Q ss_pred             HHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccc
Q 018618          192 VRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL  266 (353)
Q Consensus       192 ~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~  266 (353)
                      .|+++++|+++|+++++|+++||||||+ +++|+||++++.+     .++++++++|.+++++++++|++.+ |||+++|
T Consensus       158 ~R~~~~la~~lgv~~~~v~~~viG~Hg~-t~vp~~S~~~v~g~p~~~~~~~~~~~~i~~~v~~~g~eii~~~-~kgst~~  235 (315)
T 3tl2_A          158 ARFRTFIAQELNLSVKDITGFVLGGHGD-DMVPLVRYSYAGGIPLETLIPKERLEAIVERTRKGGGEIVGLL-GNGSAYY  235 (315)
T ss_dssp             HHHHHHHHHHHTCCGGGEECCEEBCSGG-GCEECGGGCEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SSSCCCH
T ss_pred             HHHHHHHHHHhCcCHHHceeeEecCCCC-cceeecccCeECCEEHHHhCCHHHHHHHHHHHHHHHHHHHHhc-CCCcchH
Confidence            9999999999999999999999999999 9999999998753     2567778999999999999999974 7899999


Q ss_pred             hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          267 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       267 s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      |+|.++++++++|+++.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       236 a~a~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~~~s~P~~~g~~Gv~~v~~l-~L~~~E~~~l~~s~~~l~~~~  311 (315)
T 3tl2_A          236 APAASLVEMTEAILKDQR---RVLPAIAYLEGEYGYSDLYLGVPVILGGNGIEKIIEL-ELLADEKEALDRSVESVRNVM  311 (315)
T ss_dssp             HHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCC---cEEEEEEeccCccCCCceEEEEEEEEeCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999853   688987 799999 67999999999999999999996 999999999999999999887


Q ss_pred             HH
Q 018618          345 QK  346 (353)
Q Consensus       345 ~~  346 (353)
                      +.
T Consensus       312 ~~  313 (315)
T 3tl2_A          312 KV  313 (315)
T ss_dssp             TT
T ss_pred             HH
Confidence            64

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=100.00  E-value=9.1e-61  Score=460.82  Aligned_cols=297  Identities=26%  Similarity=0.363  Sum_probs=255.4

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEE
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      |...+||+||||+|+||+++++.++..|+..||+|+|+++  ++|.++||+|+.+. ..+..   ++|++++++|||+||
T Consensus         5 ~~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~---t~d~~~al~dADvVv   81 (343)
T 3fi9_A            5 YLTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF---TSDIKEALTDAKYIV   81 (343)
T ss_dssp             CSCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE---ESCHHHHHTTEEEEE
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE---cCCHHHHhCCCCEEE
Confidence            5667899999988999999999999999888999999987  68999999997642 24443   357789999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcE-EEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHH
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT-VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR  193 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~-viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R  193 (353)
                      +++|.|+++|++|.|++..|+++++++++.+.++||+++ ++++|||+|++|+++    ++.+++|++||+|+|.||++|
T Consensus        82 itaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~----~k~sg~p~~rv~g~t~LDs~R  157 (343)
T 3fi9_A           82 SSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVT----LIYSGLKPSQVTTLAGLDSTR  157 (343)
T ss_dssp             ECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHHHH----HHHHTCCGGGEEEECCHHHHH
T ss_pred             EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHHHH----HHHcCCCcceEEEecCcHHHH
Confidence            999999999999999999999999999999999999996 899999999999875    566789999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCC
Q 018618          194 ANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAG  262 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg  262 (353)
                      +++++|+++|++|++|+ ++||||||+ +++|+||++++.+          .+++++|++|.+++++++++|++.|   |
T Consensus       158 ~~~~la~~l~v~~~~v~~~~ViGeHgd-s~vp~~S~a~v~G~pl~~~~~~~~~~~~~~~~i~~~v~~~g~eIi~~k---g  233 (343)
T 3fi9_A          158 LQSELAKHFGIKQSLVTNTRTYGGHGE-QMAVFASTAKVNGTPLTDLIGTDKLTNEQWAELKQRVVKGGANIIKLR---G  233 (343)
T ss_dssp             HHHHHHHHHTSCGGGEECCCEEESSGG-GEEECGGGCEETTEEGGGTTTBTTBCHHHHHHHHHHHHTHHHHHHHHH---S
T ss_pred             HHHHHHHHhCcCHHHcccceEEEcCCC-ceeeeeecceECCEEhhHhccccCCCHHHHHHHHHHHHhhhHHHHHcc---C
Confidence            99999999999999996 899999999 9999999998642          1467789999999999999999965   5


Q ss_pred             cc-cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCCCCccEEEEEEEEcCCceEEEccCCC-CCHHHHHHHHHHHHH
Q 018618          263 SA-TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFASKVRLGRQGAEEIFQLGP-LNEYERIGLEKAKKE  339 (353)
Q Consensus       263 ~~-~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~-L~~~E~~~l~~s~~~  339 (353)
                      ++ +||+|.++++++++|++|.+   .++|++ +++|++.+++|||+||++|++|++.+ .+.+ |+++|+++|++|++.
T Consensus       234 ~ss~~s~A~a~~~~~~ail~d~~---~v~~~s~~~~g~~~~~v~~s~P~~lg~~Gv~~~-~~~~ll~~~E~~~l~~Sa~~  309 (343)
T 3fi9_A          234 RSSFQSPSYVSIEMIRAAMGGEA---FRWPAGCYVNVPGFEHIMMAMETTITKDGVKHS-DINQLGNEAERAALKESYSH  309 (343)
T ss_dssp             SCCCHHHHHHHHHHHHHHTTSSC---CCSCEEEEEEETTEEEEEEEESEEEETTEEEEC-CGGGSSCHHHHHHHHHHHHH
T ss_pred             CCcHHhHHHHHHHHHHHHHhCCC---ceEEEEEEEeCCCcCceEEEeEEEEeCCceEEE-ecCCCCCHHHHHHHHHHHHH
Confidence            44 56999999999999999876   366665 78887778999999999999999876 4322 899999999999999


Q ss_pred             HHHHHHHhhh
Q 018618          340 LAGSIQKGIS  349 (353)
Q Consensus       340 l~~~~~~~~~  349 (353)
                      |++.++....
T Consensus       310 l~~~~~~~~~  319 (343)
T 3fi9_A          310 LAKLRDEVIA  319 (343)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9998877643

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=100.00  E-value=1e-59  Score=453.30  Aligned_cols=309  Identities=23%  Similarity=0.312  Sum_probs=250.7

Q ss_pred             hhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCC
Q 018618           30 QAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQ  100 (353)
Q Consensus        30 ~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t  100 (353)
                      +++++.++...+.||+|+||+|+||++++++|++++++.     ||+|+|+++    ++|.++||+|+.+........ +
T Consensus        13 ~~~~~~~~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~-~   91 (345)
T 4h7p_A           13 EAQTQGPGSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVV-T   91 (345)
T ss_dssp             ---------CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEE-E
T ss_pred             cccccCCCCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEE-c
Confidence            466888988888999999999999999999999987754     999999986    478899999998654444443 3


Q ss_pred             CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       101 ~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      +|.+++++|||+||+++|.||+|||+|.|++..|+++++++++.|.++| |+++|+++|||+|++++++.   ++.+|++
T Consensus        92 ~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~---~~~~g~~  168 (345)
T 4h7p_A           92 ADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILL---KSAQGKL  168 (345)
T ss_dssp             SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH---HHTTTCS
T ss_pred             CChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHH---HHccCCC
Confidence            5678999999999999999999999999999999999999999999998 78999999999999998753   4567877


Q ss_pred             CCceEee-chhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCCC-----CCChHHH-HHHHHHHhcch
Q 018618          180 PKKLLGV-TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC-----SFTQEET-EYLTNRIQNGG  251 (353)
Q Consensus       180 ~~kviG~-t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~-~el~~~v~~~~  251 (353)
                      +.|+||. |.||++|+++++|+++|++|++|+ .+|||+||+ +++|+||++++.+     .++++.+ +++.+++++++
T Consensus       169 ~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~-t~vp~~s~a~v~g~~~~~~~~~~~~~~~~~~~v~~~g  247 (345)
T 4h7p_A          169 NPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS-TQVPDTDSAVIGTTPAREAIKDDALDDDFVQVVRGRG  247 (345)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST-TCEEECTTCEETTEEGGGGCCC------HHHHHHHHH
T ss_pred             CcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC-eEEeeeccceECCccHHHhcchhhHHHHHHHHHHhhh
Confidence            7777766 999999999999999999999996 568999999 9999999998753     2333333 57999999999


Q ss_pred             hhhhhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-ee-eCCC--CCccEEEEEEEEcCCceEEEccCCCCCH
Q 018618          252 TEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FV-ASQV--TELPFFASKVRLGRQGAEEIFQLGPLNE  327 (353)
Q Consensus       252 ~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~-~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~  327 (353)
                      ++|++.|  ++++.||+|.|+++++++|+++.+... ++++. ++ +|+|  ++++|||+||+++ +|.+++++.++|++
T Consensus       248 ~eIi~~k--g~ss~~s~a~a~~~~~~~~l~~~~~~~-~vs~~v~s~~g~YGi~~~v~~s~Pv~~~-~G~~~iv~~l~l~~  323 (345)
T 4h7p_A          248 AEIIQLR--GLSSAMSAAKAAVDHVHDWIHGTPEGV-YVSMGVYSDENPYGVPSGLIFSFPCTCH-AGEWTVVSGKLNGD  323 (345)
T ss_dssp             HHHHHHH--SSCCCHHHHHHHHHHHHHHHHCCCTTC-CEEEEEECTTCTTCCCSSCEEEEEEEEE-TTEEEECCSCC---
T ss_pred             hhhhhcC--CCcchhhHHHHHHHHHHHHhcCCCCce-EEEEEEEeCCCCcCCCCCEEEEEEEEEe-CCEEEEeCCCCCCH
Confidence            9999976  357889999999999999999987543 33333 34 5888  6899999999997 78888888679999


Q ss_pred             HHHHHHHHHHHHHHHHHHHh
Q 018618          328 YERIGLEKAKKELAGSIQKG  347 (353)
Q Consensus       328 ~E~~~l~~s~~~l~~~~~~~  347 (353)
                      +||++|++|+++|+++.+.+
T Consensus       324 ~e~~~l~~s~~~L~~E~~~A  343 (345)
T 4h7p_A          324 LGKQRLASTIAELQEERAQA  343 (345)
T ss_dssp             --CGGGHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHc
Confidence            99999999999999987653

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=100.00  E-value=1.6e-59  Score=450.37  Aligned_cols=297  Identities=22%  Similarity=0.371  Sum_probs=259.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +++||+|||| |+||+++++.|+..++++||+|+|+++  +++.++||.|... ...++...  .+ +++++|||+||++
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~-~~a~~~aDvVii~   83 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS--AE-YSDAKDADLVVIT   83 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGGGCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE--CC-HHHhCCCCEEEEc
Confidence            4579999999 999999999999999999999999987  6888999999752 23344432  34 6889999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  195 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~  195 (353)
                      +|.|+++|++|.|++.+|+++++++++.|+++||++|++++|||+|++|+++    ++.+++|++||||+ |.||+.|++
T Consensus        84 ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~----~k~s~~p~~rviG~gt~LD~~R~~  159 (326)
T 2zqz_A           84 AGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAANPVDILTYAT----WKLSGFPKNRVVGSGTSLDTARFR  159 (326)
T ss_dssp             CCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECTTHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH----HHHcCCCHHHEEEccccchHHHHH
Confidence            9999999999999999999999999999999999999999999999998654    67789999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----------CCChHHHHHHHHHHhcchhhhhhhhccCCcc
Q 018618          196 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA  264 (353)
Q Consensus       196 ~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~  264 (353)
                      +++|+++|+++++|+++|||+||+ +++|+||++++.+           .++++.++++.+++++++++|++   +||++
T Consensus       160 ~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~e~~~~~~~~~~~~~~~i~~~v~~~g~eii~---~kG~t  235 (326)
T 2zqz_A          160 QSIAEMVNVDARSVHAYIMGEHGD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEIIK---LKGAT  235 (326)
T ss_dssp             HHHHHHHTCCGGGEECCEEBSSST-TCEECGGGCEETTEEHHHHHHHCTTSCHHHHHHHHHHHHTHHHHHHH---HHSCC
T ss_pred             HHHHHHhCCChhheEEEEecccCC-ceEeehhhceECCEEHHHhhcccccCCHHHHHHHHHHHHHhHHHHHH---cCCCc
Confidence            999999999999999999999999 9999999988632           14566788999999999999998   56899


Q ss_pred             cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018618          265 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG  342 (353)
Q Consensus       265 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~  342 (353)
                      +|++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++
T Consensus       236 ~~~~a~aa~~~~~ai~~~~~---~~~~vsv~~~G~yg~~~~~~svP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~  311 (326)
T 2zqz_A          236 FYGIATALARISKAILNDEN---AVLPLSVYMDGQYGLNDIYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKK  311 (326)
T ss_dssp             CHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCC---cEEEEEEeccCccCCCceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999865   578886 789998 34999999999999999999995 9999999999999999999


Q ss_pred             HHHHhhhhhc
Q 018618          343 SIQKGISFSK  352 (353)
Q Consensus       343 ~~~~~~~~~~  352 (353)
                      .++...++++
T Consensus       312 ~~~~~~~~~~  321 (326)
T 2zqz_A          312 VLTDAFAKND  321 (326)
T ss_dssp             HHHHHC----
T ss_pred             HHHHHHHhhh
Confidence            9999888765

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1e-59  Score=450.44  Aligned_cols=296  Identities=22%  Similarity=0.358  Sum_probs=257.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+||+|||| |+||+++++.|+..++++||+|+|+++  +++.++||.|... ...++...  .+ +++++|||+||+++
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~--~~-~~a~~~aDvVii~a   80 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS--GE-YSDCKDADLVVITA   80 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE--CC-GGGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE--CC-HHHhCCCCEEEECC
Confidence            479999999 999999999999999999999999987  7888999999752 23344432  34 68899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHH
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANT  196 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~  196 (353)
                      |.|+++|++|.|++.+|+++++++++.|+++||++|++++|||+|++|+++    ++.+++|++||||+ |.||+.|+++
T Consensus        81 g~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~----~k~s~~p~~rviG~gt~LD~~R~~~  156 (318)
T 1ez4_A           81 GAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYAT----WKFSGFPKERVIGSGTSLDSSRLRV  156 (318)
T ss_dssp             CC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECTTHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH----HHHcCCCHHHEEeccccchHHHHHH
Confidence            999999999999999999999999999999999999999999999998654    67789999999999 9999999999


Q ss_pred             HHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCCcccc
Q 018618          197 FVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATL  266 (353)
Q Consensus       197 ~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~  266 (353)
                      ++|+++|+++++|+++|||+||+ +++|+||++++.+          .++++.++++.+++++++++|++   +||+++|
T Consensus       157 ~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~t~~  232 (318)
T 1ez4_A          157 ALGKQFNVDPRSVDAYIMGEHGD-SEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIIN---LKGATFY  232 (318)
T ss_dssp             HHHHHHTCCGGGEECCEESSSSS-SCEECGGGCEETTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH---HHSCCCH
T ss_pred             HHHHHhCcChhHEEEEEecccCC-ceEEEehhhcCCCeeHHHHhhccCCCHHHHHHHHHHHHHhhhhhee---CCCcchH
Confidence            99999999999999999999999 9999999988642          25666789999999999999999   5689999


Q ss_pred             hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          267 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       267 s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      ++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       233 ~~a~a~~~~~~ai~~~~~---~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~  308 (318)
T 1ez4_A          233 GIGTALMRISKAILRDEN---AVLPVGAYMDGQYGLNDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVL  308 (318)
T ss_dssp             HHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCC---cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999864   578886 789998 34999999999999999999995 999999999999999999999


Q ss_pred             HHhhhhhc
Q 018618          345 QKGISFSK  352 (353)
Q Consensus       345 ~~~~~~~~  352 (353)
                      +...++++
T Consensus       309 ~~~~~~~~  316 (318)
T 1ez4_A          309 NDGLAELE  316 (318)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhh
Confidence            99887765

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=100.00  E-value=7.2e-59  Score=450.19  Aligned_cols=301  Identities=19%  Similarity=0.203  Sum_probs=251.6

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcE---EEEEeCCC------cHHHHHHHhcCCCC--CeEEEEeCCCchhhhh
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSV---LHLYDVVN------TPGVTADISHMDTG--AVVRGFLGQPQLENAL  107 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~e---l~L~D~~~------~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al  107 (353)
                      .+++||+||||+|+||+++++.|+.++++++   |+|+|.+.      ++|.++||+|+.+.  ..++..   ++.++++
T Consensus        30 ~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i~---~~~y~~~  106 (375)
T 7mdh_A           30 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG---IDPYEVF  106 (375)
T ss_dssp             CCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE---SCHHHHT
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEEe---cCCHHHh
Confidence            3567999999779999999999999998877   77765533      58999999999742  234432   3446899


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      +|||+||+++|.||+|||+|.|++..|+++++++++.|.++ +|+++++++|||+|++|+++    ++.+++++.|+||.
T Consensus       107 ~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia----~k~sg~~~~rvig~  182 (375)
T 7mdh_A          107 EDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC----LKNAPDIPAKNFHA  182 (375)
T ss_dssp             TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEE
T ss_pred             CCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHH----HHHcCCCCccEEEe
Confidence            99999999999999999999999999999999999999998 79999999999999998765    67666777788998


Q ss_pred             -chhhHHHHHHHHHHHhCCCCCCCcc-eEEeecCCCccccccccCCCCC-----CCChHHH--HHHHHHHhcchhhhhhh
Q 018618          187 -TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC-----SFTQEET--EYLTNRIQNGGTEVVEA  257 (353)
Q Consensus       187 -t~ld~~R~~~~lA~~l~v~~~~v~~-~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~--~el~~~v~~~~~~i~~~  257 (353)
                       |.||++|+++++|+++|++|++|+. +||||||+ +++|+||++++.+     ...++.|  ++|.+++++++++|++.
T Consensus       183 gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHgd-t~vp~~S~a~V~G~pl~~~~~~~~~~~~~i~~~v~~~g~eII~~  261 (375)
T 7mdh_A          183 LTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQK  261 (375)
T ss_dssp             CCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHHhCcChhhcccceEEecCCC-ceeeeeecccCCCEEhhHhccchhhHHHHHHHHHHHHHHHHHHh
Confidence             9999999999999999999999985 89999998 9999999998743     2334455  78999999999999995


Q ss_pred             hccCCcccch-HHHHHHHHHHHHHhccCCCCeEEEee-eeeC-CC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHH
Q 018618          258 KAGAGSATLS-MAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIG  332 (353)
Q Consensus       258 ~~gkg~~~~s-~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~  332 (353)
                      |   |+++|+ .|.++++.+.+|+++.+ ++.++||+ +++| +|  ++++|||+||++|++|++++++.++|+++|+++
T Consensus       262 k---G~ts~a~aa~~i~~~i~~~l~g~d-~~~v~~vs~~~~G~~YGi~~dv~~s~P~vlg~~Gv~~iv~~l~L~~~E~~~  337 (375)
T 7mdh_A          262 W---GRSSAASTAVSIADAIKSLVTPTP-EGDWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWER  337 (375)
T ss_dssp             T---SSCCHHHHHHHHHHHHHHHHSCCC-TTCCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHH
T ss_pred             c---CCCchHHHHHHHHHHHHHHhcCCC-CCeEEEEEEEeCCccCCCCCceEEEEEEEEcCCeeEEecCCCCCCHHHHHH
Confidence            4   666552 34445555555555433 23589997 7899 68  579999999999999999999634999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhh
Q 018618          333 LEKAKKELAGSIQKGISFS  351 (353)
Q Consensus       333 l~~s~~~l~~~~~~~~~~~  351 (353)
                      |++|++.|+++.+.+..++
T Consensus       338 l~~Sa~~L~~e~~~~~~~~  356 (375)
T 7mdh_A          338 IKKSEAELLAEKKCVAHLT  356 (375)
T ss_dssp             HHHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999998776554

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=100.00  E-value=1.9e-59  Score=450.60  Aligned_cols=303  Identities=23%  Similarity=0.333  Sum_probs=261.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcE-----EEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSV-----LHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGM  110 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~e-----l~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~A  110 (353)
                      +++||+|+||+|+||+++++.|+.++++++     |+|+|+++    ++|.++||+|+.+ +.+..+..+++.+++++||
T Consensus         2 ~~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~-~~~~~~~~~~~~~~~~~da   80 (333)
T 5mdh_A            2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-PLLKDVIATDKEEIAFKDL   80 (333)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-TTEEEEEEESCHHHHTTTC
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh-cccCCEEEcCCcHHHhCCC
Confidence            478999999889999999999999998888     99999974    6899999999753 2222222234567899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCc-EEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-ch
Q 018618          111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA-TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TM  188 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a-~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~  188 (353)
                      |+||+++|.|+++||+|.|++..|+++++++++.+++++|++ |++++|||+|++|+++    ++.++++|+++||. |.
T Consensus        81 DvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~~----~~~~~~~p~~~ig~~t~  156 (333)
T 5mdh_A           81 DVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTA----SKSAPSIPKENFSCLTR  156 (333)
T ss_dssp             SEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEECCH
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHHH----HHHcCCCCcCEEEEEEh
Confidence            999999999999999999999999999999999999999987 7999999999998765    56665455556776 99


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCcce-EEeecCCCccccccccCCC--CC-CC------ChHHH--HHHHHHHhcchhhhhh
Q 018618          189 LDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKP--PC-SF------TQEET--EYLTNRIQNGGTEVVE  256 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v~~~-viG~hg~~~~vp~~s~~~v--~~-~~------~~~~~--~el~~~v~~~~~~i~~  256 (353)
                      ||++|+++++|+++|++|++|+++ ||||||+ +++|+||++++  .+ .+      +++.|  +++.+++++++++|++
T Consensus       157 LDs~R~~~~la~~l~v~~~~v~~~vV~GeHgd-s~vp~~S~a~v~i~g~~~~~~~~~~~~~~~~~~~~~~v~~~g~eIi~  235 (333)
T 5mdh_A          157 LDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS-TQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAVIK  235 (333)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECTTCEEECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCHHHeeecEEEEcCCC-CEEEeeeccEeccCCeeccHHHhhccccccHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999988 5999999 99999999974  22 11      23344  5899999999999999


Q ss_pred             hhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeC-CC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHH
Q 018618          257 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIG  332 (353)
Q Consensus       257 ~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~  332 (353)
                      .+  ++++.|++|.++++++++|++|.+.+ .++||+ +++| +|  ++++|||+||++ ++|++++++.++|+++|+++
T Consensus       236 ~k--~~ssa~~~a~~~~~~~~~il~~~~~~-~v~~~s~~~~G~~YGi~~~v~~s~P~~~-~~Gv~~iv~~l~L~~~E~~~  311 (333)
T 5mdh_A          236 AR--KLSSAMSAAKAICDHVRDIWFGTPEG-EFVSMGIISDGNSYGVPDDLLYSFPVTI-KDKTWKIVEGLPINDFSREK  311 (333)
T ss_dssp             HH--SSCCCHHHHHHHHHHHHHHHHCCCTT-CCEEEEEECTTCSSSCCSSCEEEEEEEE-ETTEEEECCCCCCCHHHHHH
T ss_pred             cc--CchHHHHHHHHHHHHHHHHhcCCCCC-eEEEEEEecCCcccCCCCCeEEEEEEEE-cCCeEEEcCCCCCCHHHHHH
Confidence            65  35688999999999999999997532 488997 6899 98  479999999999 99999999833999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhc
Q 018618          333 LEKAKKELAGSIQKGISFSK  352 (353)
Q Consensus       333 l~~s~~~l~~~~~~~~~~~~  352 (353)
                      |++|++.|+++++.+++|++
T Consensus       312 l~~sa~~L~~~~~~~~~~l~  331 (333)
T 5mdh_A          312 MDLTAKELAEEKETAFEFLS  331 (333)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999875

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=100.00  E-value=1.1e-58  Score=441.56  Aligned_cols=292  Identities=24%  Similarity=0.394  Sum_probs=264.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      ||+|||| |+||+++++.++..++ +||+|+|+++  +++.++|+.|..    ....+..   ++|+ ++++|||+||++
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l-~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d~-~a~~~aD~Vi~~   74 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGY-DDLLLIARTPGKPQGEALDLAHAAAELGVDIRISG---SNSY-EDMRGSDIVLVT   74 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTC-SCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEEEC
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCC-CEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEE---CCCH-HHhCCCCEEEEe
Confidence            7999999 9999999999998888 8999999988  788899999863    1234543   3576 789999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  195 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~  195 (353)
                      +|.|+++|++|.|++.+|+++++++++.++++||++|+|++|||+|.+|+++    ++.+++|++||+|+ |.||+.|++
T Consensus        75 ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~----~k~~~~p~~rviG~gt~LD~~R~~  150 (308)
T 2d4a_B           75 AGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTNPVDAMTYVM----YKKTGFPRERVIGFSGILDSARMA  150 (308)
T ss_dssp             CSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHHHHHHHHH
T ss_pred             CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH----HHhcCCChhhEEEecccchHHHHH
Confidence            9999999999999999999999999999999999999999999999998654    67789999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCC-cccchHH
Q 018618          196 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAG-SATLSMA  269 (353)
Q Consensus       196 ~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg-~~~~s~A  269 (353)
                      +++|+++|+++++|+++|||+||+ +++|+||++++.+     .+++++++++.+++++++++|++   +|| +++|++|
T Consensus       151 ~~la~~lgv~~~~v~~~v~G~Hg~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~s~~~~~a  226 (308)
T 2d4a_B          151 YYISQKLGVSFKSVNAIVLGMHGQ-KMFPVPRLSSVGGVPLEHLMSKEEIEEVVSETVNAGAKITE---LRGYSSNYGPA  226 (308)
T ss_dssp             HHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHH---HHSSCCCHHHH
T ss_pred             HHHHHHhCcChhHeEEEEEeccCC-ceeeeehhccCCCEEHHHHcCHHHHHHHHHHHHHhhHhhhh---CCCCccHHHHH
Confidence            999999999999999999999998 9999999998743     25777899999999999999999   457 8999999


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018618          270 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  347 (353)
Q Consensus       270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~  347 (353)
                      .++++++++|++|++   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.++..
T Consensus       227 ~a~~~~~~ai~~~~~---~v~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~~~~  302 (308)
T 2d4a_B          227 AGLVLTVEAIKRDSK---RIYPYSLYLQGEYGYNDIVAEVPAVIGKSGIERIIEL-PLTEDEKRKFDEAVQAVKKLVETL  302 (308)
T ss_dssp             HHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCCC---cEEEEEEEEcCccCCCceEEEEEEEEcCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999864   588886 789998 57999999999999999999995 999999999999999999999987


Q ss_pred             hhhhc
Q 018618          348 ISFSK  352 (353)
Q Consensus       348 ~~~~~  352 (353)
                      .+.++
T Consensus       303 ~~~l~  307 (308)
T 2d4a_B          303 PPQLR  307 (308)
T ss_dssp             CHHHH
T ss_pred             HHHhc
Confidence            76654

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=100.00  E-value=2e-58  Score=440.22  Aligned_cols=290  Identities=22%  Similarity=0.338  Sum_probs=261.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |||+|||| |+||+++++.|+..++++||+|+|+++  +++.++||.|... ...++...  ++ +++++|||+||+++|
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~--~~-~~a~~~aD~Vii~ag   76 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA--GS-YGDLEGARAVVLAAG   76 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE--CC-GGGGTTEEEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE--CC-HHHhCCCCEEEECCC
Confidence            69999999 999999999999999899999999987  6788999999752 12334332  35 588999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  197 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~  197 (353)
                      .|+++|++|.|++.+|+++++++++.|+++||++|++++|||+|++|+++    ++.+++|++|+||+ |.||+.|++++
T Consensus        77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~----~k~s~~p~~rviG~gt~LD~~R~~~~  152 (310)
T 2xxj_A           77 VAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVA----YALSGLPPGRVVGSGTILDTARFRAL  152 (310)
T ss_dssp             CCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHTCCGGGEEECTTHHHHHHHHHH
T ss_pred             CCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecCchHHHHHHH----HHHcCCCHHHEEecCcchhHHHHHHH
Confidence            99999999999999999999999999999999999999999999998764    67779999999999 99999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618          198 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  265 (353)
Q Consensus       198 lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~  265 (353)
                      +|+++|+++++|+++|||+||+ +++|+||++++.+            .++++.++++.+++++++++|++   +||+++
T Consensus       153 la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~t~  228 (310)
T 2xxj_A          153 LAEYLRVAPQSVHAYVLGEHGD-SEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIE---GKGATY  228 (310)
T ss_dssp             HHHHHTSCGGGEEEEEEBCSST-TCEEEEEEEEETTEEHHHHHHHTTCCCCHHHHHHHHHHHHTHHHHHHH---HHSCCC
T ss_pred             HHHHhCcCHHHeEEEEecccCC-ccccchhhccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHhhHHHHh---ccCCcH
Confidence            9999999999999999999999 9999999987632            14666789999999999999999   558999


Q ss_pred             chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 018618          266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  343 (353)
Q Consensus       266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~  343 (353)
                      |++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.
T Consensus       229 ~~~a~a~~~~~~ai~~~~~---~~~~vs~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~  304 (310)
T 2xxj_A          229 YGIGAGLARLVRAILTDEK---GVYTVSAFTPEVAGVLEVSLSLPRILGAGGVAGTVYP-SLSPEERAALRRSAEILKEA  304 (310)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCC---CEEEEEEEEcCccCCccEEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999854   578886 789998 46899999999999999999995 99999999999999999998


Q ss_pred             HHHh
Q 018618          344 IQKG  347 (353)
Q Consensus       344 ~~~~  347 (353)
                      ++..
T Consensus       305 ~~~~  308 (310)
T 2xxj_A          305 AFAL  308 (310)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8754

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=100.00  E-value=5e-60  Score=452.27  Aligned_cols=279  Identities=20%  Similarity=0.262  Sum_probs=253.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-C--CeEEEEeCCCchhhhhCCCcEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-G--AVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~--~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      +.+||+|||| |.||+++++.++..+++++|+|+|+++  ++|.++||+|... .  ..+..   ++|+ ++++|||+||
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~---t~d~-~~~~daDiVI   94 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS---GKDY-SVSAGSKLVV   94 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE---ESSS-CSCSSCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE---cCCH-HHhCCCCEEE
Confidence            4579999999 999999999999999999999999987  7899999999742 1  23332   3676 4699999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHH
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  193 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R  193 (353)
                      +++|.|+++||+|.|++.+|+++++++++.+.++||++|++++|||+|++|+++    ++.+++|++|+||+ |.||+.|
T Consensus        95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtNPvdi~t~~~----~k~sg~p~~rViG~gt~LDs~R  170 (330)
T 3ldh_A           95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPELGTDKNKQD----WKLSGLPMHRIIGSGCNLDSAR  170 (330)
T ss_dssp             ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEECCTTHHHHHH
T ss_pred             EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCCccHHHHHHH----HHHhCCCHHHeecccCchhHHH
Confidence            999999999999999999999999999999999999999999999999998765    57779999999999 8999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHH-HHHHHHHhcchhhhhhhhccCCcccchHHH--
Q 018618          194 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET-EYLTNRIQNGGTEVVEAKAGAGSATLSMAY--  270 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~-~el~~~v~~~~~~i~~~~~gkg~~~~s~A~--  270 (353)
                      +++++|+++|+++++|+++|||+||+ +++|+||+          +| +++.+++++++++|++   +||+++|++|.  
T Consensus       171 ~~~~lA~~lgv~~~~V~~~V~G~Hg~-t~vp~~S~----------~~~~~~~~~v~~~g~eii~---~kg~t~~a~a~~~  236 (330)
T 3ldh_A          171 FRYLMGERLGVHSCLVIGWVIGQHGD-SVPSVWSG----------MWDAKLHKDVVDSAYEVIK---LKGYTSWAIGLVV  236 (330)
T ss_dssp             HHHHHHHHHTSCTTTCCEEECSSSST-TCCEEEEE----------EEETTEEHHHHHCCCTTST---TCHHHHHHHHHTT
T ss_pred             HHHHHHHHhCCCHHHeEEEEEcCCCC-ceeeechh----------hHHHHHHHHHHHHHHHHHH---ccCCcceeeeeec
Confidence            99999999999999999999999999 99999998          23 6788999999999998   56899999999  


Q ss_pred             ---------------HHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEE--EccCCCCCHHHH
Q 018618          271 ---------------AAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEE--IFQLGPLNEYER  330 (353)
Q Consensus       271 ---------------a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~--v~~~~~L~~~E~  330 (353)
                                     ++++++++|+++.+   .++||+ +++|+|  ++++|||+||++| +|+++  ++++ +|+++|+
T Consensus       237 ~~~~~~~~~~~~~~~a~~~~~~ail~~~~---~v~~~s~~~~g~yg~~~~v~~s~P~~lg-~Gv~~~~iv~~-~L~~~E~  311 (330)
T 3ldh_A          237 SNPVDVLTYVAWKGCSVADLAQTIMKDLC---RVHPVSTMVKDFYGIKDNVFLSLPCVLN-NGISHCNIVKM-KLKPDEE  311 (330)
T ss_dssp             HHHHTTSSSCSCTHHHHHHHHHHHHHTCC---EEECCBCCCSSSSSCCSCCCCBCCEEEB-TTBCTTCCCCC-CCCHHHH
T ss_pred             cCccchhhhhhhHHHHHHHHHHHHHcCCC---ceEEEEeecCCccCCCCceEEEEEEEEC-CcEEEcceecC-CCCHHHH
Confidence                           99999999999854   689997 789999  4599999999999 99999  9995 9999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 018618          331 IGLEKAKKELAGSIQK  346 (353)
Q Consensus       331 ~~l~~s~~~l~~~~~~  346 (353)
                      ++|++|++.|++.++.
T Consensus       312 ~~l~~s~~~l~~~~~~  327 (330)
T 3ldh_A          312 QQLQKSATTLWDIQKD  327 (330)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999987764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=100.00  E-value=3e-57  Score=430.96  Aligned_cols=290  Identities=26%  Similarity=0.365  Sum_probs=260.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC--CC--cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV--VN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~--~~--~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      |||+||||+|++|++++..|+..++..|++|+|+  ++  +++.++|+.|... ...++...  ++ +++++|||+||++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~--~~-~~a~~~aDvVi~~   77 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ--GG-YEDTAGSDVVVIT   77 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE--CC-GGGGTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe--CC-HHHhCCCCEEEEc
Confidence            6999999779999999999999888889999999  65  5677899988632 23344432  34 5889999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  195 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~  195 (353)
                      +|.++++|++|.|++.+|+++++++++.+++++|++|++++|||+|++|++    +++.+++|++|++|+ |.||+.|++
T Consensus        78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SNPv~~~~~~----~~~~~~~p~~rviG~gt~Ld~~r~~  153 (303)
T 1o6z_A           78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRH----LYEAGDRSREQVIGFGGRLDSARFR  153 (303)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHH----HHHHSSSCGGGEEECCHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHH----HHHHcCCCHHHeeecccchhHHHHH
Confidence            999999999999999999999999999999999999999999999999865    478889999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC--CC-ChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHH
Q 018618          196 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC--SF-TQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAA  272 (353)
Q Consensus       196 ~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~--~~-~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~  272 (353)
                      +++|+++|+++++|+++|||+||+ +++|+||++++.+  .+ ++++++++.+++++++++|++   +||+++||+|.++
T Consensus       154 ~~la~~l~v~~~~v~~~v~G~HG~-~~~p~~s~~~v~g~p~~~~~~~~~~~~~~v~~~g~eii~---~kg~~~~~~a~a~  229 (303)
T 1o6z_A          154 YVLSEEFDAPVQNVEGTILGEHGD-AQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQESAMDVIE---RKGATEWGPARGV  229 (303)
T ss_dssp             HHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTBCCCCCHHHHHHHHHHHHHHHHHHHT---TTSSCCHHHHHHH
T ss_pred             HHHHHHhCcCHHHeEEEEEeCCCC-ccccCCcccccCCcCccCCHHHHHHHHHHHHHHhHHHHh---cCCChHHHHHHHH
Confidence            999999999999999999999999 9999999987521  44 788899999999999999998   6789999999999


Q ss_pred             HHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHH
Q 018618          273 VKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK  346 (353)
Q Consensus       273 ~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~  346 (353)
                      ++++++|++|++   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+++
T Consensus       230 ~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~  301 (303)
T 1o6z_A          230 AHMVEAILHDTG---EVLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK  301 (303)
T ss_dssp             HHHHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCC---CEEEEEEecCCccCCcceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999875   478876 789998 56899999999999999999995 99999999999999999998875

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=100.00  E-value=1.5e-57  Score=435.63  Aligned_cols=293  Identities=22%  Similarity=0.369  Sum_probs=260.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-C-CeEEEEeCCCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~-~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      +++||+|||| |+||+++++.|+..+++.+|+|+|+++  +++.++|+.|... . ..++...  ++ +++++|||+||+
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~--~~-~~a~~~aDvVvi   80 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA--GE-YSDCHDADLVVI   80 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE--CC-GGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe--CC-HHHhCCCCEEEE
Confidence            4579999999 999999999999888888999999987  6788899988531 1 2334432  34 688999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      ++|.|+++|++|.|++.+|+++++++++.|.++||++|++++|||+|++|+++    ++.+++|++|+||+ |.||+.|+
T Consensus        81 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~----~k~~~~p~~rviG~gt~lD~~r~  156 (317)
T 3d0o_A           81 CAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATNPVDILAYAT----WKFSGLPKERVIGSGTILDSARF  156 (317)
T ss_dssp             CCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECTTHHHHHHH
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHH----HHHhCCCHHHEEecCccccHHHH
Confidence            99999999999999999999999999999999999999999999999998654    67789999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCCcc
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSA  264 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~  264 (353)
                      ++++|+++|+++++|+++|||+||+ +++|+||++++.+          .++++.++++.+++++++++|++   +||++
T Consensus       157 ~~~la~~l~v~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~~  232 (317)
T 3d0o_A          157 RLLLSEAFDVAPRSVDAQIIGEHGD-TELPVWSHANIAGQPLKTLLEQRPEGKAQIEQIFVQTRDAAYDIIQ---AKGAT  232 (317)
T ss_dssp             HHHHHHHHTSCGGGCBCCEEBCSST-TCEECTTTCEETTEEHHHHHHTSTTHHHHHHHHHHHHHTHHHHHHH---HHSCC
T ss_pred             HHHHHHHhCcChhhEEEEEEecCCC-CeeEeeeccccCCEEHHHHhhccCCCHHHHHHHHHHHHhhhhEEEe---CCCCc
Confidence            9999999999999999999999999 9999999988642          14455678999999999999998   56899


Q ss_pred             cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHH
Q 018618          265 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAG  342 (353)
Q Consensus       265 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~  342 (353)
                      +|++|.|+++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++
T Consensus       233 ~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~  308 (317)
T 3d0o_A          233 YYGVAMGLARITEAIFRNED---AVLTVSALLEGEYEEEDVYIGVPAVINRNGIRNVVEI-PLNDEEQSKFAHSAKTLKD  308 (317)
T ss_dssp             CHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHH
T ss_pred             hHhHHHHHHHHHHHHHcCCC---cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEEecC-CCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999854   578886 789998 34999999999999999999995 9999999999999999999


Q ss_pred             HHHHhh
Q 018618          343 SIQKGI  348 (353)
Q Consensus       343 ~~~~~~  348 (353)
                      .++...
T Consensus       309 ~~~~~~  314 (317)
T 3d0o_A          309 IMAEAE  314 (317)
T ss_dssp             HHHC--
T ss_pred             HHHHHH
Confidence            987654

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1.8e-57  Score=435.18  Aligned_cols=293  Identities=24%  Similarity=0.356  Sum_probs=253.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +++||+|||| |+||+++++.|+..++++||+|+|+++  +++.++||.|... ...++..  .++ +++++|||+||++
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~--~~~-~~a~~~aDvVii~   81 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY--AGD-YSDVKDCDVIVVT   81 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE--ECC-HHHhCCCCEEEEc
Confidence            3579999999 999999999999999999999999987  6889999999752 2345543  245 5789999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRAN  195 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~  195 (353)
                      +|.|+++|++|.|++.+|+++++++++.|.+++|++|++++|||+|++|+++    ++.+++|++|+||+ |.||+.|++
T Consensus        82 ~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNPv~~~~~~~----~k~s~~p~~rviG~gt~Ld~~r~~  157 (318)
T 1y6j_A           82 AGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMI----QKWSGLPVGKVIGSGTVLDSIRFR  157 (318)
T ss_dssp             CCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHH----HHHHTCCTTTEEECTTHHHHHHHH
T ss_pred             CCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecCcHHHHHHHH----HHHcCCCHHHEeccCCchHHHHHH
Confidence            9999999999999999999999999999999999999999999999998764    67779999999999 999999999


Q ss_pred             HHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----C--------CChHHHHHHHHHHhcchhhhhhhhccCCc
Q 018618          196 TFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S--------FTQEETEYLTNRIQNGGTEVVEAKAGAGS  263 (353)
Q Consensus       196 ~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~--------~~~~~~~el~~~v~~~~~~i~~~~~gkg~  263 (353)
                      +++|+++|+++++|+++|||+||+ +++|+||++++.+    .        +++++++++.+++++++++|++   +||+
T Consensus       158 ~~la~~lgv~~~~v~~~v~G~HG~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~  233 (318)
T 1y6j_A          158 YLLSEKLGVDVKNVHGYIIGEHGD-SQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATIIK---NKGA  233 (318)
T ss_dssp             HHHHTTTTCCTTTEECCEEBCSSS-SCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHHHH---HTSC
T ss_pred             HHHHHHhCCCHHHeEEEEecccCC-cEeeeehhceECCEEHHHHhhhhcccCCHHHHHHHHHHHHHhhHhHhh---CCCc
Confidence            999999999999999999999999 9999999987531    1        2334468999999999999998   5689


Q ss_pred             ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618          264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  341 (353)
Q Consensus       264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~  341 (353)
                      ++|++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus       234 t~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~G~yg~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~  309 (318)
T 1y6j_A          234 TYYGIAVSINTIVETLLKNQN---TIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVK  309 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCC---CEECCEEEECSBTTBCSEEEECCEEEETTEEEECCCC-CCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHcCCC---cEEEEEEeecCccCCcceEEEEEEEEcCCeeEEEecC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999865   477776 789998 57899999999999999999995 999999999999999999


Q ss_pred             HHHHHhh
Q 018618          342 GSIQKGI  348 (353)
Q Consensus       342 ~~~~~~~  348 (353)
                      +.++...
T Consensus       310 ~~~~~~~  316 (318)
T 1y6j_A          310 KVLNEVK  316 (318)
T ss_dssp             HHHHHCC
T ss_pred             HHHHHHh
Confidence            9998754

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=100.00  E-value=1.6e-56  Score=427.14  Aligned_cols=291  Identities=28%  Similarity=0.461  Sum_probs=254.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      +||+|||| |+||+++++.|+..|++ +|+|+|+++  +++.++|+.|..    ...++..   ++|+ ++++|||+||+
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~-~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~---t~d~-~a~~~aD~Vi~   76 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG---TNNY-ADTANSDVIVV   76 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESCG-GGGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCC-eEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEE---CCCH-HHHCCCCEEEE
Confidence            69999999 99999999999999976 499999987  678889999863    1234443   3576 88999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      ++|.|+++|++|.|++.+|+++++++++.++++||++|++++|||+|++|+++    ++.+++|++||+|+ |.||+.|+
T Consensus        77 a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNPv~~~t~~~----~~~~~~~~~rviG~gt~LD~~r~  152 (309)
T 1ur5_A           77 TSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLA----AEVSGFPKERVIGQAGVLDAARY  152 (309)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCHHHHHHHH
T ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcCCchHHHHHHH----HHHcCCCHHHEEECCcchHHHHH
Confidence            99999999999999999999999999999999999999999999999998654    67789999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccchHH
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  269 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A  269 (353)
                      ++++|+++|+++++|+++|||+||+ +++|+||++++.+     .+++++++++.+++++++++|++. .++|+++|++|
T Consensus       153 ~~~la~~lgv~~~~v~~~v~G~Hg~-t~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~eii~~-~~kgs~~~~~a  230 (309)
T 1ur5_A          153 RTFIAMEAGVSVEDVQAMLMGGHGD-EMVPLPRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVNL-LKTGSAYYAPA  230 (309)
T ss_dssp             HHHHHHHHTCCGGGEEECCEECSGG-GEECCGGGEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHH-HSSCCCCHHHH
T ss_pred             HHHHHHHhCCChhheeEEEecCcCC-ceeeeeecceeCCEeHHHHcCHhHHHHHHHHHHhhhHHhhhh-ccCCCcHHHHH
Confidence            9999999999999999999999998 9999999988642     257788999999999999999985 35789999999


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018618          270 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  347 (353)
Q Consensus       270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~  347 (353)
                      .++++++++|++|++   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+++.
T Consensus       231 ~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~  306 (309)
T 1ur5_A          231 AATAQMVEAVLKDKK---RVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDTL  306 (309)
T ss_dssp             HHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCC---cEEEEEEEecCccCCcceEEEEEEEEeCCceEEecCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999864   588886 789998 57999999999999999999995 999999999999999999998865


Q ss_pred             h
Q 018618          348 I  348 (353)
Q Consensus       348 ~  348 (353)
                      .
T Consensus       307 ~  307 (309)
T 1ur5_A          307 K  307 (309)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=100.00  E-value=1.8e-56  Score=427.43  Aligned_cols=294  Identities=24%  Similarity=0.407  Sum_probs=255.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC--CC--cHHHHHHHhcCCC-C-CeEEEEeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV--VN--TPGVTADISHMDT-G-AVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~--~~--~~~~~~dl~~~~~-~-~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      |||+||||+|++|+++++.|+..++..|++|+|+  ++  +++.++|+.|... . ..++....+++++++++|||+||+
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            6999999999999999999999888889999999  65  5778899988531 1 233332222236789999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      ++|.++++|++|.+++.+|+++++++++.+++++ ++|++++|||+|++|+++    ++.+++|++|++|+ |.||+.|+
T Consensus        81 ~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNPv~~~t~~~----~k~~~~p~~rviG~gt~LD~~r~  155 (313)
T 1hye_A           81 TSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNPVDVMTYKA----LVDSKFERNQVFGLGTHLDSLRF  155 (313)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSSHHHHHHHH----HHHHCCCTTSEEECTTHHHHHHH
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCcHHHHHHHH----HHhhCcChhcEEEeCccHHHHHH
Confidence            9999999999999999999999999999999999 999999999999998764    66789999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----C---CChHHHHHHHHHHhcchhhhhhhhccCCcccch
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S---FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLS  267 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~---~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s  267 (353)
                      ++++|+++|+++++|+++|||+||+ +++|+||++++.+    .   +++++++++.+++++++++|++   +||+++|+
T Consensus       156 ~~~la~~lgv~~~~v~~~v~G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kgs~~~~  231 (313)
T 1hye_A          156 KVAIAKFFGVHIDEVRTRIIGEHGD-SMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIR---LKGGSEFG  231 (313)
T ss_dssp             HHHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTEEGGGCGGGGGCCHHHHHHHHHHHTTSCCC---------CC
T ss_pred             HHHHHHHhCcCHHHeEEEEeeccCC-cccceeeccccCCEEHHHHhcCCHHHHHHHHHHHHhccceeec---CCCCcHHH
Confidence            9999999999999999999999998 9999999988642    2   3566689999999999999998   67899999


Q ss_pred             HHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          268 MAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       268 ~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      +|.++++++++|++|++   .+++++ +++|+|  .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       232 ~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~  307 (313)
T 1hye_A          232 PAAAILNVVRCIVNNEK---RLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYC  307 (313)
T ss_dssp             HHHHHHHHHHHHHTTCC---EEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCC---eEEEEEEeecceecCccceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999864   577776 789998  35999999999999999999995 999999999999999999998


Q ss_pred             HHhh
Q 018618          345 QKGI  348 (353)
Q Consensus       345 ~~~~  348 (353)
                      ++..
T Consensus       308 ~~~~  311 (313)
T 1hye_A          308 EEVK  311 (313)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            8754

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=100.00  E-value=1.1e-56  Score=429.36  Aligned_cols=293  Identities=21%  Similarity=0.337  Sum_probs=261.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      +++||+|||+ |.||+++++.|+..++.++|+|+|+++  +++.++|+.|....  ..++...  ++ +++++|||+||+
T Consensus         5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~--~~-~~al~~aDvVii   80 (316)
T 1ldn_A            5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH--GD-YDDCRDADLVVI   80 (316)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE--CC-GGGTTTCSEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc--Cc-HHHhCCCCEEEE
Confidence            4579999999 999999999999888888999999987  67788999885421  2444432  34 578999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      +++.++++|++|.|++.+|.++++++++.+++++|++|++++|||+|.+|+++    ++.+++|++||||+ |.||+.|+
T Consensus        81 a~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tNPv~~~~~~~----~~~s~~p~~rviG~gt~lD~~r~  156 (316)
T 1ldn_A           81 CAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYAT----WKFSGLPHERVIGSGTILDTARF  156 (316)
T ss_dssp             CCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHH----HHHHTCCGGGEEECTTHHHHHHH
T ss_pred             cCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHHH----HHHhCCCHHHEEecccchHHHHH
Confidence            99999999999999999999999999999999999999999999999998764    67779999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----C-------CChHHHHHHHHHHhcchhhhhhhhccCCc
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S-------FTQEETEYLTNRIQNGGTEVVEAKAGAGS  263 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~-------~~~~~~~el~~~v~~~~~~i~~~~~gkg~  263 (353)
                      ++++|+++|+++++|+++|||+||+ +++|+||++++.+    .       +.+++++++.+++++++++|++   +||+
T Consensus       157 ~~~la~~l~v~~~~v~~~v~G~HG~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~  232 (316)
T 1ldn_A          157 RFLLGEYFSVAPQNVHAYIIGEHGD-TELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQIIE---KKGA  232 (316)
T ss_dssp             HHHHHHHHTSCGGGEEEEEEBCSST-TCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHHH---HHSC
T ss_pred             HHHHHHHhCCCHHHeEEEEecccCC-ceeeeehhccCCCEEHHHHhhccccCCHHHHHHHHHHHHHhHHHHHh---ccCC
Confidence            9999999999999999999999999 9999999987532    1       3455678999999999999999   5589


Q ss_pred             ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618          264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  341 (353)
Q Consensus       264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~  341 (353)
                      ++|++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|+
T Consensus       233 ~~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~yg~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~  308 (316)
T 1ldn_A          233 TYYGIAMGLARVTRAILHNEN---AILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLK  308 (316)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESTTSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHhCCC---cEEEEEEEecCccCCcceEEEEEEEEeCCeeEEEccC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999854   578886 789998 56999999999999999999995 999999999999999999


Q ss_pred             HHHHHhh
Q 018618          342 GSIQKGI  348 (353)
Q Consensus       342 ~~~~~~~  348 (353)
                      +.+++.+
T Consensus       309 ~~~~~~~  315 (316)
T 1ldn_A          309 SVLARAF  315 (316)
T ss_dssp             HHHHHSC
T ss_pred             HHHHHHh
Confidence            9988753

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=100.00  E-value=3e-56  Score=423.57  Aligned_cols=284  Identities=17%  Similarity=0.238  Sum_probs=246.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +++||+|||| |+||+++++.++..+++++|+|+|+++ +.+.++|+.|... +.++.   ++|+ ++++|||+||+++|
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~~-~~i~~---t~d~-~~l~~aD~Vi~aag   86 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFNL-PNVEI---SKDL-SASAHSKVVIFTVN   86 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHTC-TTEEE---ESCG-GGGTTCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhcC-CCeEE---eCCH-HHHCCCCEEEEcCC
Confidence            3479999998 999999999999999999999999987 7778889998543 45665   2576 88999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  197 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~  197 (353)
                      .+ ++||+|.|++.+|++++++++++++++||++|+|++|||+|++|++    +++.+++|++||+|+ |.||+.|++++
T Consensus        87 ~~-~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sNP~~~~t~~----~~~~~~~p~~rviG~gt~Ld~~R~~~~  161 (303)
T 2i6t_A           87 SL-GSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQPVEIMTYV----TWKLSTFPANRVIGIGCNLDSQRLQYI  161 (303)
T ss_dssp             C-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHHHHHHHH
T ss_pred             CC-CCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCChHHHHHHH----HHHhcCCCHHHeeCCCCCchHHHHHHH
Confidence            96 7999999999999999999999999999999999999999999765    467789999999999 99999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCcccchHHHHHHHHHH
Q 018618          198 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFAD  277 (353)
Q Consensus       198 lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A~a~~~li~  277 (353)
                      +|+++|+++++|+++|||+||+ +++|+||+...   +   ..+++.+++++++++|++   ++|+++||+|.+++++++
T Consensus       162 la~~lgv~~~~v~~~v~G~Hg~-s~~p~~s~~~~---~---~~~~~~~~~~~~g~eii~---~kGst~~~~a~a~~~i~~  231 (303)
T 2i6t_A          162 ITNVLKAQTSGKEVWVIGEQGE-DKVLTWSGQEE---V---VSHTSQVQLSNRAMELLR---VKGQRSWSVGLSVADMVD  231 (303)
T ss_dssp             HHHTSCCTTGGGGEEEEBSCSS-SCEEEEBCSSC---C---CCHHHHHHHHHHHHTTSS---SCCCCHHHHHHHHHHHHH
T ss_pred             HHHHcCCChHHeEEEEecCCCC-Ccccccccccc---c---cHHHHHHHHHHHHHHHHH---ccCchHHhHHHHHHHHHH
Confidence            9999999999999999999998 99999998531   2   124677778889999988   678999999999999999


Q ss_pred             HHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018618          278 ACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  347 (353)
Q Consensus       278 ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~  347 (353)
                      +|++|++   .+++++ +++|+|  ++++|||+||++|++|+++++++++|+++|+++|++|++.|++.++..
T Consensus       232 ai~~~~~---~~~~vs~~~~g~yg~~~~~~~~vP~~ig~~Gv~~i~~~~~l~~~e~~~l~~s~~~l~~~~~~~  301 (303)
T 2i6t_A          232 SIVNNKK---KVHSVSALAKGYYDINSEVFLSLPCILGTNGVSEVIKTTLKEDTVTEKLQSSASSIHSLQQQL  301 (303)
T ss_dssp             HHHTTCC---EEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCBCC-CCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHcCCC---cEEEEEEEeCCccCCCCCeEEEEEEEEECCccEEecCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            9999875   577776 789998  579999999999999999998866899999999999999999988753

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=100.00  E-value=7.5e-55  Score=417.59  Aligned_cols=291  Identities=29%  Similarity=0.466  Sum_probs=259.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      +++||+|||| |++|+.++..|+..+++ +|+|+|+++  +++.+.|+.+..    ...+++.   ++|+ ++++|||+|
T Consensus         3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~-~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~---t~d~-~al~~aD~V   76 (322)
T 1t2d_A            3 PKAKIVLVGS-GMIGGVMATLIVQKNLG-DVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG---SNTY-DDLAGADVV   76 (322)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE---ECCG-GGGTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE---CCCH-HHhCCCCEE
Confidence            3579999999 99999999999999986 499999988  677788888752    1234553   3677 889999999


Q ss_pred             EEcCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-c
Q 018618          114 IIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-T  187 (353)
Q Consensus       114 Ii~ag~~~~~g~~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t  187 (353)
                      |+++|.|+++|++     |.|++.+|+++++++++.|.++||++|+|++|||++++|+++    ++.++||++||+|+ |
T Consensus        77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tNP~~~~t~~~----~~~~g~~~~rviG~gt  152 (322)
T 1t2d_A           77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLL----HQHSGVPKNKIIGLGG  152 (322)
T ss_dssp             EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHH----HHHHCCCGGGEEECCH
T ss_pred             EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCChHHHHHHH----HHhcCCChHHEEeccC
Confidence            9999999999999     999999999999999999999999999999999999997664    56678999999999 7


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhh
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEA  257 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~  257 (353)
                      .||++|+++++|+++|+++++|+++|||+||+ +++|+||++++.+          .+++++++++.+++++++++|++.
T Consensus       153 ~ld~~R~~~~la~~lgv~~~~v~~~v~G~HG~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~  231 (322)
T 1t2d_A          153 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGN-KMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNL  231 (322)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccHHHHHHHHHHHhCCCHHHeEEEEEcCCCC-cEEeeHHHceECcEeHHHhccccCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999998 9999999987631          256677899999999999999994


Q ss_pred             hccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018618          258 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  335 (353)
Q Consensus       258 ~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~  335 (353)
                         ||+++||+|.++++++++|++|++   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++
T Consensus       232 ---kgs~~~~~a~a~~~~~~ai~~~~~---~v~~~s~~~~g~~g~~~~~~~vP~~ig~~Gv~~i~~~-~l~~~e~~~l~~  304 (322)
T 1t2d_A          232 ---HASPYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIEL-QLNSEEKAKFDE  304 (322)
T ss_dssp             ---TSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHH
T ss_pred             ---cCchHHHHHHHHHHHHHHHHhCCC---CEEEEEEEecCccCCCceEEEEEEEEeCCeeEEeCCC-CCCHHHHHHHHH
Confidence               578999999999999999999864   588876 789999 57999999999999999999995 999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 018618          336 AKKELAGSIQKGI  348 (353)
Q Consensus       336 s~~~l~~~~~~~~  348 (353)
                      |++.|++.++.+-
T Consensus       305 s~~~L~~~~~~~~  317 (322)
T 1t2d_A          305 AIAETKRMKALAH  317 (322)
T ss_dssp             HHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999988753

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=100.00  E-value=1.2e-54  Score=417.31  Aligned_cols=292  Identities=33%  Similarity=0.519  Sum_probs=260.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      ++||+|||| |.+|++++..|+..|++ +|+|+|+++  +++.++|+.|..    ...++..   ++|+ +++++||+||
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~-~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~---t~d~-~al~~aD~VI   87 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLG-DVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG---ENNY-EYLQNSDVVI   87 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCC-EEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE---CCCH-HHHCCCCEEE
Confidence            469999999 99999999999999985 599999988  566677877753    1234554   3677 8899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHH
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  193 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R  193 (353)
                      +++|.|+++|++|.|++.+|+++++++++.+.++||++++|++|||++++|+++    ++.+++|++||+|+ |.||++|
T Consensus        88 ~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tNP~~~~t~~~----~~~~~~~~~rviG~~t~Ld~~R  163 (328)
T 2hjr_A           88 ITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITNPLDAMVYYF----KEKSGIPANKVCGMSGVLDSAR  163 (328)
T ss_dssp             ECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEESCHHHHHHH
T ss_pred             EcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH----HHhcCCChhhEEEeCcHHHHHH
Confidence            999999999999999999999999999999999999999999999999997654    56789999999999 5999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCCc
Q 018618          194 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  263 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~  263 (353)
                      +++++|+++|+++++|+++|||+||+ +++|+||++++.+          .+++++++++.+++++++++|++.+ ++|+
T Consensus       164 ~~~~la~~lgv~~~~v~~~v~G~Hg~-t~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~~~-~~gs  241 (328)
T 2hjr_A          164 FRCNLSRALGVKPSDVSAIVVGGHGD-EMIPLTSSVTIGGILLSDFVEQGKITHSQINEIIKKTAFGGGEIVELL-KTGS  241 (328)
T ss_dssp             HHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHHHH-SSCC
T ss_pred             HHHHHHHHhCCCHHHeeEEEecCCCC-ceeeeeeeceECCEEHHHHhhccCCCHHHHHHHHHHHHhhHHHHHhhh-CCCc
Confidence            99999999999999999999999998 9999999987632          1466778899999999999999964 6789


Q ss_pred             ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618          264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  341 (353)
Q Consensus       264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~  341 (353)
                      +.||+|.++++++++|++|++   .+++++ +++|+| .+++|||+||++|++|+++++.+ +|+++|+++|++|+..|+
T Consensus       242 ~~~~~a~a~~~i~~ai~~~~~---~v~~~~v~~~G~~g~~~~~~~vP~~ig~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~  317 (328)
T 2hjr_A          242 AFYAPAASAVAMAQAYLKDSK---SVLVCSTYLTGQYNVNNLFVGVPVVIGKNGIEDVVIV-NLSDDEKSLFSKSVESIQ  317 (328)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHcCCC---cEEEEEEeecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999999865   588886 789998 57999999999999999999995 999999999999999999


Q ss_pred             HHHHHhh
Q 018618          342 GSIQKGI  348 (353)
Q Consensus       342 ~~~~~~~  348 (353)
                      +.++.+.
T Consensus       318 ~~~~~~~  324 (328)
T 2hjr_A          318 NLVQDLK  324 (328)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998775

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=100.00  E-value=2.8e-54  Score=415.17  Aligned_cols=294  Identities=31%  Similarity=0.507  Sum_probs=260.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      ++|||+|||| |.+|++++..|+..+++ +|+|+|+++  +++.+.|+.|..    ....++.   ++|+++++++||+|
T Consensus         8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~-~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~~ea~~~aDiV   82 (331)
T 1pzg_A            8 RRKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA---EYSYEAALTGADCV   82 (331)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE---ECSHHHHHTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCC-eEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE---eCCHHHHhCCCCEE
Confidence            4579999999 99999999999998875 599999988  566677777642    1234554   36887799999999


Q ss_pred             EEcCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-c
Q 018618          114 IIPAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-T  187 (353)
Q Consensus       114 Ii~ag~~~~~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t  187 (353)
                      |+++|.|+++|+     +|.|++.+|+++++++++.|.++||++|+|++|||++++|+++    ++.+++|++||+|+ |
T Consensus        83 i~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tNP~~~~t~~~----~~~~~~~~~rviG~gt  158 (331)
T 1pzg_A           83 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVM----CEASGVPTNMICGMAC  158 (331)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEECCH
T ss_pred             EEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCchHHHHHHH----HHhcCCChhcEEeccc
Confidence            999999999999     9999999999999999999999999999999999999997654    56678999999999 7


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhh
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEA  257 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~  257 (353)
                      .||+.|+++++|+++|+++++|+++|||+||+ +++|+||++++.+          .+++++++++.+++++++++|++.
T Consensus       159 ~LD~~R~~~~la~~lgv~~~~v~~~v~G~Hg~-~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~eii~~  237 (331)
T 1pzg_A          159 MLDSGRFRRYVADALSVSPRDVQATVIGTHGD-CMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVRF  237 (331)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhCCCHHHceEEEecCCCC-CEeeeeecceECCEEHHHHhhcccCCHHHHHHHHHHHHhccHHHHHh
Confidence            99999999999999999999999999999998 9999999987632          156667889999999999999985


Q ss_pred             hccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018618          258 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  335 (353)
Q Consensus       258 ~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~  335 (353)
                      . ++|+++||+|.++++++++|++|++   .+++++ +++|+| .+++|||+||++|++|+++++.+ +|+++|+++|++
T Consensus       238 ~-~kgst~~~~a~a~~~ii~ai~~~~~---~~~~~~v~~~G~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~l~~  312 (331)
T 1pzg_A          238 L-GQGSAYYAPAASAVAMATSFLNDEK---RVIPCSVYCNGEYGLKDMFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQK  312 (331)
T ss_dssp             H-SSSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHH
T ss_pred             h-cCCCccchHHHHHHHHHHHHHhCCC---cEEEEEEEecCccCCCceEEEEEEEEeCCeeEEecCC-CCCHHHHHHHHH
Confidence            3 5789999999999999999999864   588886 789998 57999999999999999999995 999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 018618          336 AKKELAGSIQKGI  348 (353)
Q Consensus       336 s~~~l~~~~~~~~  348 (353)
                      |++.|++.+++..
T Consensus       313 s~~~l~~~~~~~~  325 (331)
T 1pzg_A          313 SVDDVMALNKAVA  325 (331)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988753

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=100.00  E-value=8.7e-54  Score=411.56  Aligned_cols=299  Identities=22%  Similarity=0.304  Sum_probs=258.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCC-----cEEEEEeCC----C--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVV----N--TPGVTADISHMDTGAVVRGFLGQPQLENALT  108 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~-----~el~L~D~~----~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~  108 (353)
                      ++|||+||||+|+||+++++.|+..+++     .+|+|+|++    +  +.+.++||.|...... ..+..++|++++++
T Consensus         4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~-~~i~~~~~~~~al~   82 (329)
T 1b8p_A            4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL-AGMTAHADPMTAFK   82 (329)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE-EEEEEESSHHHHTT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc-CcEEEecCcHHHhC
Confidence            4689999998899999999999988865     499999998    5  5788999999642222 22223467889999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC-CCCCCceEee
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  186 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kviG~  186 (353)
                      |||+||+++|.++++|++|.+++.+|+++++++++.++++| |++|++++|||+|++|+++    ++.+ +||++|++|+
T Consensus        83 ~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~----~~~~~~~p~~~v~g~  158 (329)
T 1b8p_A           83 DADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIA----MKSAPSLPAKNFTAM  158 (329)
T ss_dssp             TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEEC
T ss_pred             CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHH----HHHcCCCCHHHEEEe
Confidence            99999999999999999999999999999999999999998 9999999999999998765    5666 9999999999


Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcc-eEEeecCCCccccccccCCCCC-C----CChHH--HHHHHHHHhcchhhhhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPC-S----FTQEE--TEYLTNRIQNGGTEVVEAK  258 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~-~viG~hg~~~~vp~~s~~~v~~-~----~~~~~--~~el~~~v~~~~~~i~~~~  258 (353)
                      |.||+.|+++++|+++|+++++|++ +|||+||+ +++|+||++++.+ +    +++++  .+++.+++++++++|++.|
T Consensus       159 t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg~-s~~p~~s~~~v~g~~~~~~~~~~~~~~~~i~~~v~~~g~eii~~k  237 (329)
T 1b8p_A          159 LRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSP-TMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR  237 (329)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSST-TCEEECSSCEETTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHHH
T ss_pred             ecHHHHHHHHHHHHHhCcCHHHceEEEEEeccCC-cEeeehHHCeECCeeHHHHhccchhhHHHHHHHHHHHHHhhhhcc
Confidence            9999999999999999999999985 68999998 9999999998743 1    23334  3789999999999999976


Q ss_pred             ccCCccc-chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEcc-CCCCCHHHHHHH
Q 018618          259 AGAGSAT-LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQ-LGPLNEYERIGL  333 (353)
Q Consensus       259 ~gkg~~~-~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~-~~~L~~~E~~~l  333 (353)
                         |.++ ++.|.++++++++|+++..+  .+++++ +++|+|  ++++|||+||++ ++|++++++ + +|+++|+++|
T Consensus       238 ---g~~~~~~~a~a~~~~~~ai~~~~~~--~~~~~s~~~~g~yg~~~~~~~s~P~~i-~~Gv~~i~~~~-~l~~~e~~~l  310 (329)
T 1b8p_A          238 ---GVSSAASAANAAIDHIHDWVLGTAG--KWTTMGIPSDGSYGIPEGVIFGFPVTT-ENGEYKIVQGL-SIDAFSQERI  310 (329)
T ss_dssp             ---SSCCHHHHHHHHHHHHHHHHHCCTT--CCEEEEEECCSGGGCCTTCEEEEEEEE-ETTEEEECCCC-CCCHHHHHHH
T ss_pred             ---CCChHHHHHHHHHHHHHHHhcCCCC--cEEEEEEEecCccCCCCCeEEEEEEEE-cCCEEEecCCC-CCCHHHHHHH
Confidence               3344 44677899999999998422  377776 689988  689999999999 999999998 6 9999999999


Q ss_pred             HHHHHHHHHHHHHhhhhh
Q 018618          334 EKAKKELAGSIQKGISFS  351 (353)
Q Consensus       334 ~~s~~~l~~~~~~~~~~~  351 (353)
                      ++|++.|++.++.+.+++
T Consensus       311 ~~s~~~l~~~~~~~~~~~  328 (329)
T 1b8p_A          311 NVTLNELLEEQNGVQHLL  328 (329)
T ss_dssp             HHHHHHHHHHHHHHGGGG
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999988764

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=100.00  E-value=4.5e-53  Score=403.44  Aligned_cols=293  Identities=30%  Similarity=0.495  Sum_probs=259.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      |||+|||+ |.+|+.++..|+..+...+|+|+|+++  +++.++|+.+..    ....+..   ++|++ ++++||+||+
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~~-~l~~aDvVii   75 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG---SNDYA-DTANSDIVII   75 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE---ESCGG-GGTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE---CCCHH-HHCCCCEEEE
Confidence            69999999 999999999999876566999999988  567777887752    1233443   35764 5999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~  194 (353)
                      +++.|+++|++|.|++.+|+++++++++.+.+++|+++++++|||++.+++++    ++.+++|++|++|+ |.||+.|+
T Consensus        76 av~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~~~~~~~~----~~~~~~~~~rviG~gt~ld~~r~  151 (310)
T 1guz_A           76 TAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA----WVRSGLPKERVIGMAGVLDAARF  151 (310)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHH----HHHHCSCGGGEEEECHHHHHHHH
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcCchHHHHHHH----HHhcCCChHHEEECCCchHHHHH
Confidence            99999999999999999999999999999999999999999999999987654    66689999999999 99999999


Q ss_pred             HHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCCcccchHH
Q 018618          195 NTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMA  269 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~s~A  269 (353)
                      ++++|+++|+++++|+++|||+||+ +++|+||++++.+     .+++++++++.+++++++++|++. .+||+++|++|
T Consensus       152 ~~~la~~l~v~~~~v~~~v~G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~-~~kgs~~~~~a  229 (310)
T 1guz_A          152 RSFIAMELGVSMQDINACVLGGHGD-AMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEH-LKQGSAFYAPA  229 (310)
T ss_dssp             HHHHHHHHTCCGGGEECCEEECSGG-GEEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHH-HSSSCCCHHHH
T ss_pred             HHHHHHHhCCCHHHeEEEEEcccCC-cEeeeeecccCCCEEHHHHCCHHHHHHHHHHHHHhHHHHHhh-cCCCCcHHHHH
Confidence            9999999999999999999999998 9999999998743     256778999999999999999985 36789999999


Q ss_pred             HHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018618          270 YAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKG  347 (353)
Q Consensus       270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~  347 (353)
                      .++++++++|++|++   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|++|++.|++.++..
T Consensus       230 ~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~~~~  305 (310)
T 1guz_A          230 SSVVEMVESIVLDRK---RVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKML  305 (310)
T ss_dssp             HHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCC---cEEEEEEeecCccCCcceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999864   588876 789998 57999999999999999999995 999999999999999999999876


Q ss_pred             hh
Q 018618          348 IS  349 (353)
Q Consensus       348 ~~  349 (353)
                      ..
T Consensus       306 ~~  307 (310)
T 1guz_A          306 ES  307 (310)
T ss_dssp             --
T ss_pred             hh
Confidence            43

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=100.00  E-value=4.4e-53  Score=402.47  Aligned_cols=285  Identities=25%  Similarity=0.337  Sum_probs=229.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |||+|||| |.+|++++..|+..|+.++|+|+|+++  +++.++|+.|... ....+...  +++ +++++||+||++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~~-~a~~~aDvVIi~~~   76 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GGH-SELADAQVVILTAG   76 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--ECG-GGGTTCSEEEECC-
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CCH-HHhCCCCEEEEcCC
Confidence            69999999 999999999999999888999999987  5778889988652 12333322  354 78999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  197 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~  197 (353)
                      .|+++|++|.|++.+|+++++++++.+.+++|+++++++|||++++++++    ++.+  |++||+|+ |.||+.|++++
T Consensus        77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~----~~~~--~~~rviG~gt~Ld~~r~~~~  150 (304)
T 2v6b_A           77 ANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLA----TQLA--PGQPVIGSGTVLDSARFRHL  150 (304)
T ss_dssp             -----------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHH----HHHS--CSSCEEECTTHHHHHHHHHH
T ss_pred             CCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHH----HHhC--ChhcEEeCCcCchHHHHHHH
Confidence            99999999999999999999999999999999999999999999987654    4554  89999999 99999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618          198 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  265 (353)
Q Consensus       198 lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~  265 (353)
                      +|+++|+++++|++++||+||+ +++|+||++++.+            .++++.++++.+++++++++|++   +||+++
T Consensus       151 la~~l~v~~~~v~~~v~G~Hg~-~~~p~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~eii~---~kg~t~  226 (304)
T 2v6b_A          151 MAQHAGVDGTHAHGYVLGEHGD-SEVLAWSSAMVAGMPVADFMQAQNLPWNEQVRAKIDEGTRNAAASIIE---GKRATY  226 (304)
T ss_dssp             HHHHHTSCGGGEECCEEESSST-TEEECGGGCEETTEEHHHHHHHHTCCCSHHHHHHHHHHHTC--------------CC
T ss_pred             HHHHhCcCHHHceEEEecCCCC-ceeeehhHccCCCEEHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---ccCCcH
Confidence            9999999999999999999999 9999999998742            14666789999999999999998   678999


Q ss_pred             chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      |++|.++++++++|++|.+   .+++++ +++| |.  +|||+||++|++|+++++++ +|+++|+++|++|++.|++.+
T Consensus       227 ~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g-yg--~~~~~P~~ig~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~~  299 (304)
T 2v6b_A          227 YGIGAALARITEAVLRDRR---AVLTVSAPTPE-YG--VSLSLPRVVGRQGVLSTLHP-KLTGDEQQKLEQSAGVLRGFK  299 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---EEEEEEEEETT-TT--EEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHHhCCC---cEEEEEEEECC-cC--cEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999854   578886 7899 83  99999999999999999995 999999999999999999888


Q ss_pred             HHh
Q 018618          345 QKG  347 (353)
Q Consensus       345 ~~~  347 (353)
                      ++.
T Consensus       300 ~~~  302 (304)
T 2v6b_A          300 QQL  302 (304)
T ss_dssp             ---
T ss_pred             HHh
Confidence            753

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1.9e-50  Score=386.80  Aligned_cols=291  Identities=26%  Similarity=0.434  Sum_probs=254.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |||+|||+ |.+|++++..|+..|+.++|+|+|+++  +++.+.++.+... ....+...  +|+ +++++||+||++++
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~d~-~~~~~aDvViiav~   76 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA--GDY-ADLKGSDVVIVAAG   76 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE--CCG-GGGTTCSEEEECCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe--CCH-HHhCCCCEEEEccC
Confidence            69999999 999999999999888878999999986  4566666665321 11222222  354 78999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHHHHHH
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVRANTF  197 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R~~~~  197 (353)
                      .++++|++|.|++.+|+++++++++.|.+++|+++++++|||++.+++++    ++.+++|++||+|+ |.||+.|++++
T Consensus        77 ~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~~----~~~~~~~~~rviG~~t~ld~~r~~~~  152 (319)
T 1a5z_A           77 VPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFF----LKESGMDPRKVFGSGTVLDTARLRTL  152 (319)
T ss_dssp             CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHTCCTTTEEECTTHHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcHHHHHHHH----HHHhCCChhhEEeeCccHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999987654    56668999999999 89999999999


Q ss_pred             HHHHhCCCCCCCcceEEeecCCCccccccccCCCCC--------C---CChHHHHHHHHHHhcchhhhhhhhccCCcccc
Q 018618          198 VAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC--------S---FTQEETEYLTNRIQNGGTEVVEAKAGAGSATL  266 (353)
Q Consensus       198 lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~--------~---~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~~  266 (353)
                      +|+++|+++.+|+++|||+||+ +++|+||++++.+        .   ++++.++++.++++++++++++   +||+++|
T Consensus       153 la~~lgv~~~~v~~~v~G~hg~-~~~p~~s~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~eii~---~kg~~~~  228 (319)
T 1a5z_A          153 IAQHCGFSPRSVHVYVIGEHGD-SEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEIIE---RKGATHY  228 (319)
T ss_dssp             HHHHHTCCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHHH---HHSCCCH
T ss_pred             HHHHhCcCHHHceEEEEeCCCC-CcccchhhceECCEEHHHHhhcccccCHHHHHHHHHHHHHhhhhhhc---cCCchHH
Confidence            9999999999999999999999 9999999987632        1   4566788999999999999998   4588999


Q ss_pred             hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          267 SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       267 s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      ++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++.+ +|+++|+++|++|++.|++.+
T Consensus       229 ~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g~~g~~~~~~~vP~~vg~~Gv~~i~~~-~L~~~e~~~l~~s~~~l~~~~  304 (319)
T 1a5z_A          229 AIALAVADIVESIFFDEK---RVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAI  304 (319)
T ss_dssp             HHHHHHHHHHHHHHTTCC---EEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCC---CEEEEEEEecCccCccceEEEEEEEEeCCceEEEecC-CCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999854   578886 789998 57899999999999999999995 999999999999999999999


Q ss_pred             HHhh
Q 018618          345 QKGI  348 (353)
Q Consensus       345 ~~~~  348 (353)
                      +.+.
T Consensus       305 ~~~~  308 (319)
T 1a5z_A          305 NEIT  308 (319)
T ss_dssp             HHHH
T ss_pred             HHhc
Confidence            8763

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=100.00  E-value=1.3e-48  Score=372.32  Aligned_cols=290  Identities=19%  Similarity=0.269  Sum_probs=247.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +|||+|||+ |.+|+.++..|+..|+..+|+|+|+++  +++.+.++.|...  ...++...  +|+ +++++||+||++
T Consensus         1 m~kI~VIGa-G~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~d~-~~~~~aDvViia   76 (309)
T 1hyh_A            1 ARKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI--NDW-AALADADVVIST   76 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE--SCG-GGGTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe--CCH-HHhCCCCEEEEe
Confidence            369999998 999999999999888656999999987  5566667765421  12234322  466 789999999999


Q ss_pred             CCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhH
Q 018618          117 AGVPRK----PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDV  191 (353)
Q Consensus       117 ag~~~~----~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~  191 (353)
                      ++.+++    +|++|.|++.+|+++++++++.+.+++|+++++++|||++.++++    +++.+++|++|++|+ |.||+
T Consensus        77 v~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~~~~~~~----~~~~~~~~~~rvig~gt~ld~  152 (309)
T 1hyh_A           77 LGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITAL----FQHVTGFPAHKVIGTGTLLDT  152 (309)
T ss_dssp             CSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHH----HHHHHCCCGGGEEECTTHHHH
T ss_pred             cCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcCcHHHHHHH----HHHhcCCCHHHEeecCccchH
Confidence            999888    999999999999999999999999999999999999999998765    366678999999999 99999


Q ss_pred             HHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----C---CChHHHHHHHHHHhcchhhhhhhhccCCcc
Q 018618          192 VRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S---FTQEETEYLTNRIQNGGTEVVEAKAGAGSA  264 (353)
Q Consensus       192 ~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~---~~~~~~~el~~~v~~~~~~i~~~~~gkg~~  264 (353)
                      .|+++.+|+.+++++.+++++++|+||+ +++|+||++++.+    .   ++++.|+++.++++++++++++.   ||++
T Consensus       153 ~r~~~~~a~~l~~~~~~v~~~v~G~hg~-~~~~~~s~~~v~g~~~~~~~~~~~~~~~~~~~~v~~~g~~ii~~---kg~~  228 (309)
T 1hyh_A          153 ARMQRAVGEAFDLDPRSVSGYNLGEHGN-SQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNG---KGYT  228 (309)
T ss_dssp             HHHHHHHHHHHTCCGGGCBCCEEBCTTT-TCEECTTTCEETTEEGGGC-----CCHHHHHHHHHHHHHHHHHH---HSSC
T ss_pred             HHHHHHHHHHhCCChhheEEEEEeCCCC-cEeeccccceECCEEHHHhccCCHHHHHHHHHHHHHhHHHHHhc---cCCc
Confidence            9999999999999999999999999998 9999999987632    1   45667899999999999999984   4789


Q ss_pred             cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 018618          265 TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  343 (353)
Q Consensus       265 ~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~  343 (353)
                      .|++|.++++++++|++|++   .+++++ +++|   +++++|+||++|++|+++++++ +|+++|+++|++|++.|++.
T Consensus       229 ~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~g---~~~~~~vP~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~~~  301 (309)
T 1hyh_A          229 SYGVATSAIRIAKAVMADAH---AELVVSNRRDD---MGMYLSYPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQR  301 (309)
T ss_dssp             CHHHHHHHHHHHHHHHTTCC---EEEEEEEECTT---TCSEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCC---cEEEEEEEECC---CCeEEEEEEEEeCCceEEEeCC-CCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999999875   588876 7788   7999999999999999999996 99999999999999999999


Q ss_pred             HHHhhh
Q 018618          344 IQKGIS  349 (353)
Q Consensus       344 ~~~~~~  349 (353)
                      ++...+
T Consensus       302 ~~~~~~  307 (309)
T 1hyh_A          302 FDEIVD  307 (309)
T ss_dssp             HHHHHT
T ss_pred             HHHHhh
Confidence            988765

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=100.00  E-value=1.4e-47  Score=366.52  Aligned_cols=292  Identities=30%  Similarity=0.470  Sum_probs=256.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      ++||+|||| |.+|+.++..|+..|+. +|+|+|+++  +++.++|+.+..    ....+..   ++|+ +++++||+||
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~-~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~---t~d~-~a~~~aDiVi   77 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLA-DVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG---TDDY-ADISGSDVVI   77 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE---ESCG-GGGTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCc-eEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE---CCCH-HHhCCCCEEE
Confidence            579999999 99999999999988864 699999987  455566766542    1234443   3576 7899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHH
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  193 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R  193 (353)
                      +++|.|+++|++|.|++.+|.++++++++.+.+++|+++++++|||++++++.+    ++.+++|++|++|+ |.+|+.|
T Consensus        78 ~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp~~~~~~~~----~~~~~~~~~rviG~~t~ld~~r  153 (317)
T 2ewd_A           78 ITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITNPLDVMVSHF----QKVSGLPHNKVCGMAGVLDSSR  153 (317)
T ss_dssp             ECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH----HHHHCCCGGGEEESCHHHHHHH
T ss_pred             EeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCChHHHHHHHH----HHhhCCCHHHEEeccCcHHHHH
Confidence            999999999999999999999999999999999999999999999999997654    56678999999999 7999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhhhccCCc
Q 018618          194 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEAKAGAGS  263 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~~~gkg~  263 (353)
                      +++.+|+++|+++.+++++|+|+||+ +++|+|+.+++.+          .+++++++++.+.++.+++++++.. |+|+
T Consensus       154 ~~~~la~~lg~~~~~v~~~v~g~Hg~-~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id~~~~~~~~~~~ei~~~~-g~g~  231 (317)
T 2ewd_A          154 FRTFIAQHFGVNASDVSANVIGGHGD-GMVPATSSVSVGGVPLSSFIKQGLITQEQIDEIVCHTRIAWKEVADNL-KTGT  231 (317)
T ss_dssp             HHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHH-SSSC
T ss_pred             HHHHHHHHhCcChhhceEEEEecCCC-ceeEEeeccccCCEEHHHHHhccCCCHHHHHHHHHHHHhhHHHHHHhh-cCCc
Confidence            99999999999999999999999998 9999999986532          2566778888888888999999864 7889


Q ss_pred             ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHH
Q 018618          264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELA  341 (353)
Q Consensus       264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~  341 (353)
                      +.|++|.++++++++|++|.+   .+++++ +++|+| .+++|||+||++|++|+++++.+ +|+++|+++|++|+..|+
T Consensus       232 ~~~~~a~a~~~~~~ai~~~~~---~~~~~~~~~~G~~g~~~~~~~~P~~i~~~Gv~~i~~~-~l~~~e~~~l~~s~~~l~  307 (317)
T 2ewd_A          232 AYFAPAAAAVKMAEAYLKDKK---AVVPCSAFCSNHYGVKGIYMGVPTIIGKNGVEDILEL-DLTPLEQKLLGESINEVN  307 (317)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCC---EEEEEEEEESSSTTCSSEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHcCCC---eEEEEEEEecCccCCcceEEEeEEEEcCCeeEEecCC-CCCHHHHHHHHHHHHHHH
Confidence            999999999999999998864   588876 789998 57999999999999999999995 999999999999999999


Q ss_pred             HHHHHhh
Q 018618          342 GSIQKGI  348 (353)
Q Consensus       342 ~~~~~~~  348 (353)
                      +.+++..
T Consensus       308 ~~~~~~~  314 (317)
T 2ewd_A          308 TISKVLD  314 (317)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            9988653

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=100.00  E-value=2.6e-45  Score=352.02  Aligned_cols=300  Identities=23%  Similarity=0.350  Sum_probs=252.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCC-----cEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTGM  110 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~-----~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~A  110 (353)
                      .+|||+|+||+|++|++++..|+..|+.     .+|+++|+++    ..+.++|+.|..... +..+..+++++++++++
T Consensus         3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~-~~di~~~~~~~~a~~~~   81 (327)
T 1y7t_A            3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL-LAGLEATDDPKVAFKDA   81 (327)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEEEEEESCHHHHTTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc-cCCeEeccChHHHhCCC
Confidence            3579999999999999999999988864     4999999874    456778998864211 12222235678899999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC-CCCCCceEeech
Q 018618          111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGVTM  188 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kviG~t~  188 (353)
                      |+||++||.+++++++|.+++..|+.+++++++.+++++ |+++++++|||++.++++.    ++.+ +++|.+++|.|.
T Consensus        82 D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~----~~~~~~~~p~~~yg~tk  157 (327)
T 1y7t_A           82 DYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA----YKNAPGLNPRNFTAMTR  157 (327)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEECCH
T ss_pred             CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHH----HHHcCCCChhheeccch
Confidence            999999999998999999999999999999999999998 9999999999998877653    4555 789999999999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCCC----C-CChHH-HHHHHHHHhcchhhhhhhhccC
Q 018618          189 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC----S-FTQEE-TEYLTNRIQNGGTEVVEAKAGA  261 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~~----~-~~~~~-~~el~~~v~~~~~~i~~~~~gk  261 (353)
                      +++.|+.+.+++.+|+++..++ ..|||+|++ +++|.|++..+.+    . ++++. ++++.+++++++++|++.|   
T Consensus       158 l~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~v~~~g~~ii~~k---  233 (327)
T 1y7t_A          158 LDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS-TMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQAR---  233 (327)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTSCHHHHHHTHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHhCcChhheeeeEEEcCCCC-eEEEEeeeeeeCCeeHHHhccchhHHHHHHHHHHHHHHHHHHcc---
Confidence            9999999999999999999998 578999998 8999999987532    1 23222 4799999999999999976   


Q ss_pred             Ccc-cchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHH
Q 018618          262 GSA-TLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAK  337 (353)
Q Consensus       262 g~~-~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~  337 (353)
                      |.+ ++++|.++++++++|++|++. +.+++++ +++|+|  ++++|||+||++ ++|++++++.++|+++|+++|++|+
T Consensus       234 g~~~~~~~a~a~~~~~~~i~~~~~~-~~~~~~~~~~~g~yg~~~~~~~~~P~~i-~~G~~~i~~~~~l~~~e~~~l~~s~  311 (327)
T 1y7t_A          234 GASSAASAANAAIEHIRDWALGTPE-GDWVSMAVPSQGEYGIPEGIVYSFPVTA-KDGAYRVVEGLEINEFARKRMEITA  311 (327)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTBCCT-TCCEEEEEECSSGGGCCTTSEEEEEEEE-ETTEEEECCCCCCCHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCCC-CeEEEEEEEecCccCCCCCeEEEEEEEE-cCCeEEecCCCCCCHHHHHHHHHHH
Confidence            344 446788999999999999631 2477886 689998  589999999999 9999999883499999999999999


Q ss_pred             HHHHHHHHHhhhh
Q 018618          338 KELAGSIQKGISF  350 (353)
Q Consensus       338 ~~l~~~~~~~~~~  350 (353)
                      +.|++.++.+.++
T Consensus       312 ~~l~~~~~~~~~~  324 (327)
T 1y7t_A          312 QELLDEMEQVKAL  324 (327)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999887653

>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A

Probab=100.00  E-value=2.9e-42  Score=340.09  Aligned_cols=290  Identities=13%  Similarity=0.096  Sum_probs=226.7

Q ss_pred             CCeEEEEcCCCCc-HHHHHHHHHh--CCC-CcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEE
Q 018618           41 GFKVAILGAAGGI-GQPLAMLMKI--NPL-VSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~v-G~~la~~l~~--~~~-~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      ++||+|||| |++ +..++..|+.  .++ .+||+|+|+++  +++ +.|+.+.......+.. .++|+++|++|||+||
T Consensus         2 ~~KI~IIGa-G~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~-~~~~~~~~~~~~~~v~-~t~d~~~al~~AD~Vi   78 (417)
T 1up7_A            2 HMRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKI-VVDFVKRLVKDRFKVL-ISDTFEGAVVDAKYVI   78 (417)
T ss_dssp             CCEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHH-HHHHHHHHHTTSSEEE-ECSSHHHHHTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHH-HHHHHHHHhhCCeEEE-EeCCHHHHhCCCCEEE
Confidence            579999999 776 2222334555  666 88999999987  332 4555442111113332 2578889999999999


Q ss_pred             EcCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHH
Q 018618          115 IPAGVPRKPGMTRDD--------------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       115 i~ag~~~~~g~~r~~--------------------~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                      +++|.++++|++|++                    ++.+|+++++++++.|+++| +||+|++|||++++|+++    ++
T Consensus        79 itagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~-~A~lin~TNPvdi~t~a~----~k  153 (417)
T 1up7_A           79 FQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS-NATIVNFTNPSGHITEFV----RN  153 (417)
T ss_dssp             ECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT-CCEEEECSSSHHHHHHHH----HH
T ss_pred             EcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC-CEEEEEeCChHHHHHHHH----HH
Confidence            999998888777742                    46899999999999999999 999999999999998654    66


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-----------ecCCCccccccccC---CCCC----CC-
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-----------GHAGVTILPLLSQV---KPPC----SF-  235 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-----------~hg~~~~vp~~s~~---~v~~----~~-  235 (353)
                      .+  |++|+||+|... .|+++.+|+.+|+++++|+++++|           +||+ +++|.||..   ++.+    .+ 
T Consensus       154 ~~--p~~rviG~c~~~-~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~~~~hG~-d~~p~~~~~~~~~~~~~~~~~~~  229 (417)
T 1up7_A          154 YL--EYEKFIGLCNVP-INFIREIAEMFSARLEDVFLKYYGLNHLSFIEKVFVKGE-DVTEKVFENLKLKLSNIPDEDFP  229 (417)
T ss_dssp             TT--CCSSEEECCSHH-HHHHHHHHHHTTCCGGGEEEEEEEETTEEEEEEEEETTE-ECHHHHHHHHTTC---CCTTSCC
T ss_pred             hC--CCCCEEEeCCCH-HHHHHHHHHHhCCCHHHCeEEEEeecceeeEEEeecCCc-EehhhHHHHHHHhhCCCcCCchH
Confidence            64  777999997544 499999999999999999999999           9999 999999985   3211    12 


Q ss_pred             --------------------ChHHHHHH---------HHHHhcchhhhh--------hhhccCCcccchHHHHHHHHHHH
Q 018618          236 --------------------TQEETEYL---------TNRIQNGGTEVV--------EAKAGAGSATLSMAYAAVKFADA  278 (353)
Q Consensus       236 --------------------~~~~~~el---------~~~v~~~~~~i~--------~~~~gkg~~~~s~A~a~~~li~a  278 (353)
                                          +++.++++         .+++++.+++++        +. .++|++.|  +.+++++++|
T Consensus       230 ~~~~~~~g~~p~~y~~~y~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~~~~~~~~~l-~~kg~t~~--~~~a~~ii~A  306 (417)
T 1up7_A          230 TWFYDSVRLIVNPYLRYYLMEKKMFKKISTHELRAREVMKIEKELFEKYRTAVEIPEEL-TKRGGSMY--STAAAHLIRD  306 (417)
T ss_dssp             HHHHHHHCSEECGGGHHHHTHHHHHHHHHTSCCHHHHHHHHHHHHHHHHTTCSSCCGGG-GGSTTTTH--HHHHHHHHHH
T ss_pred             HHHHHhcCCCccchhhhccCCHHHHHhccccchHHHHHHHHHHHHHHHHHhhcccchhh-hhcCCcHH--HHHHHHHHHH
Confidence                                12333444         456666678887        22 24566644  7899999999


Q ss_pred             HHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 018618          279 CLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS  349 (353)
Q Consensus       279 i~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~~~~~  349 (353)
                      |++|++   .+++++ +++|.|   |+|+++|+||+||++|++++... +|+++|+++++.++...+..++.+++
T Consensus       307 I~~d~~---~~~~vsv~n~G~i~~lp~d~~vevP~~vg~~Gi~~i~~~-~L~~~e~~~l~~~~~~e~l~veA~~~  377 (417)
T 1up7_A          307 LETDEG---KIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQG-KGDHFALSFIHAVKMYERLTIEAYLK  377 (417)
T ss_dssp             HHSSSC---EEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCCC-CCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHcCCC---eEEEEEEecCCccCCCCCCeEEEEeEEEeCCceEEeecC-CCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            999865   588887 689987   58999999999999999999995 99999999999999999988888764

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=100.00  E-value=1.1e-40  Score=318.02  Aligned_cols=291  Identities=21%  Similarity=0.380  Sum_probs=249.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC---CCeEEEEeCCCchhhhhCCCcEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT---GAVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~---~~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      ++|||+|||| |.+|+.++..|+..|+.++|+|+|+++  +++.++|+.+...   ...+..   ++++ +++++||+||
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~-~~~~~aD~Vi   80 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDG---SDDP-EICRDADMVV   80 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEE---ESCG-GGGTTCSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEe---CCCH-HHhCCCCEEE
Confidence            3589999999 999999999999998878999999986  4555677766431   123332   2354 6899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhhHHH
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLDVVR  193 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld~~R  193 (353)
                      ++++.++++|++|.|++.+|+++++++++.+.+++|+++|++++||++.++++.    ++.+++|++|++|. |.+++.|
T Consensus        81 i~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~~~~~----~~~~~~~~~~vig~~~~l~~~r  156 (319)
T 1lld_A           81 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVA----QKLTGLPENQIFGSGTNLDSAR  156 (319)
T ss_dssp             ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH----HHHHTCCTTSEEECTTHHHHHH
T ss_pred             ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHHHHHH----HHhcCCCHHHEeeccccHhHHH
Confidence            999999999999999999999999999999999999999999999999987654    45568999999999 9999999


Q ss_pred             HHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----------C--CChHHHHHHHHHHhcchhhhhhhhcc
Q 018618          194 ANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------S--FTQEETEYLTNRIQNGGTEVVEAKAG  260 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----------~--~~~~~~~el~~~v~~~~~~i~~~~~g  260 (353)
                      ++..+++++++++.+++.+++|+||+ +++|+|+...++.           .  .+++.++++.+.+++++.+|++   .
T Consensus       157 ~~~~~a~~~~v~~~~v~~~~~G~~g~-~~~~~w~k~~in~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~v~~---~  232 (319)
T 1lld_A          157 LRFLIAQQTGVNVKNVHAYIAGEHGD-SEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIIN---G  232 (319)
T ss_dssp             HHHHHHHHHTCCGGGEECCEEBSSST-TCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHHHHT---S
T ss_pred             HHHHHHHHhCCCHHHeEEEEEeCCCC-ceeeeeecceECCccHHHHHhccccccCCHHHHHHHHHHHHHhhHhhhh---C
Confidence            99999999999999999999999998 8999999876531           1  2333478888899999999988   4


Q ss_pred             CCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHH
Q 018618          261 AGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKK  338 (353)
Q Consensus       261 kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~  338 (353)
                      +|++.++++.+.++++++|+++.+   .+++++ +++|+| ..+.++|+||.++++|+++++++ +|+++|+++|++|++
T Consensus       233 ~G~~~~~~a~~~~sm~~di~~~~~---~ei~~s~~~~G~~~~~~~~~gvp~~~~~~Gv~~i~~~-~l~~~e~~~l~~s~~  308 (319)
T 1lld_A          233 KGATNYAIGMSGVDIIEAVLHDTN---RILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTINT-PVSDKELAALKRSAE  308 (319)
T ss_dssp             CCSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECSSBTTBCSSEEEEEEEEETTEEECCSCC-CCCHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCC---cEEEEEEEecCcCCccceEEEEEEEEeCCeeEEEcCC-CCCHHHHHHHHHHHH
Confidence            578889999999999999998854   467775 789998 67899999999999999999995 999999999999999


Q ss_pred             HHHHHHHHh
Q 018618          339 ELAGSIQKG  347 (353)
Q Consensus       339 ~l~~~~~~~  347 (353)
                      .|++.++..
T Consensus       309 ~l~~~~~~~  317 (319)
T 1lld_A          309 TLKETAAQF  317 (319)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHHh
Confidence            999988753

>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=3.1e-41  Score=335.80  Aligned_cols=292  Identities=14%  Similarity=0.137  Sum_probs=225.8

Q ss_pred             CCeEEEEcCCCCc-HHHHHHHHHh--CCC-CcEEEEEeCCC--cHHH-HHHHh-----cCCCCCeEEEEeCCCchhhhhC
Q 018618           41 GFKVAILGAAGGI-GQPLAMLMKI--NPL-VSVLHLYDVVN--TPGV-TADIS-----HMDTGAVVRGFLGQPQLENALT  108 (353)
Q Consensus        41 ~~KI~IiGa~G~v-G~~la~~l~~--~~~-~~el~L~D~~~--~~~~-~~dl~-----~~~~~~~v~~~~~t~d~~~al~  108 (353)
                      ++||+|||| |++ |..++..|+.  .++ ..||+|+|+++  .+.. +.|+.     +......+..   ++|+++|++
T Consensus         7 ~~KIaVIGa-Gsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~~~~~~~~i~~---t~D~~eal~   82 (450)
T 1s6y_A            7 RLKIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHL---TLDRRRALD   82 (450)
T ss_dssp             CEEEEEETT-TCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEE---ESCHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHhhcCCCcEEEE---eCCHHHHhC
Confidence            469999999 888 7777777776  566 78999999976  3211 12222     2222334554   468889999


Q ss_pred             CCcEEEEcCCCCCCCCCCHHH--------------------HHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHH
Q 018618          109 GMDLVIIPAGVPRKPGMTRDD--------------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA  168 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~--------------------~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~  168 (353)
                      |||+||+++|.++++|++|++                    ++.+|+++++++++.|+++||+||+|++|||+|++|+++
T Consensus        83 gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tNPvdivT~a~  162 (450)
T 1s6y_A           83 GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAV  162 (450)
T ss_dssp             TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH
T ss_pred             CCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH
Confidence            999999999998888887764                    489999999999999999999999999999999997654


Q ss_pred             HHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-----------ecCCCccccccccCCCC-----
Q 018618          169 AEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-----------GHAGVTILPLLSQVKPP-----  232 (353)
Q Consensus       169 ~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-----------~hg~~~~vp~~s~~~v~-----  232 (353)
                          ++.+  |++||||+|... .|+++.+|+.+|+++++|+++++|           +||+ +++|.|+.....     
T Consensus       163 ----~k~~--p~~rViG~c~~~-~r~~~~la~~lgv~~~~v~~~v~GlNH~~w~~~v~~~G~-d~~p~~~~~~~~~~~~g  234 (450)
T 1s6y_A          163 ----LRYT--KQEKVVGLCNVP-IGMRMGVAKLLGVDADRVHIDFAGLNHMVFGLHVYLDGV-EVTEKVIDLVAHPDRSG  234 (450)
T ss_dssp             ----HHHC--CCCCEEECCSHH-HHHHHHHHHHHTSCGGGEEEEEEEETTEEEEEEEEETTE-ECHHHHHHHHSCC----
T ss_pred             ----HHhC--CCCCEEEeCCcH-HHHHHHHHHHhCCCHHHcEEEEEeeecceeEEEeeeCCc-CchHhHHHHHhhhcccc
Confidence                6664  778999997655 499999999999999999999999           9998 999999873211     


Q ss_pred             --------CCC---------------------ChHHH-------------HHHHHHHhcchhhhh-----hhhc--cCCc
Q 018618          233 --------CSF---------------------TQEET-------------EYLTNRIQNGGTEVV-----EAKA--GAGS  263 (353)
Q Consensus       233 --------~~~---------------------~~~~~-------------~el~~~v~~~~~~i~-----~~~~--gkg~  263 (353)
                              ..+                     +++.+             .++.+++++.+++++     +.+.  -.+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~g~~p~~y~~yy~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ei~~~~~~~~k~~~~~~~  314 (450)
T 1s6y_A          235 VTMKNIVDLGWEPDFLKGLKVLPCPYHRYYFQTDKMLAEELEAAKTKGTRAEVVQQLEKELFELYKDPNLAIKPPQLEKR  314 (450)
T ss_dssp             --------CCCCHHHHHHHCSBCCGGGHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTTTCC-----------C
T ss_pred             ccccccccCccHHHHHHhcCCccchhhhhhcCCHHHHHhhhccccccchHHHHHHHHHHHHHHHHhhhccccccchhhcc
Confidence                    011                     12211             244566777778887     3221  0013


Q ss_pred             ccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHH
Q 018618          264 ATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE  339 (353)
Q Consensus       264 ~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~  339 (353)
                      +.+++|.++++++++|++|++   .+++++ +++|.|   |+|+++|+||+||++|+.++... +|+++|++++..++..
T Consensus       315 ~~~~~~~~a~~ii~AI~~d~~---~~~~vsv~n~G~i~~lp~d~~vevP~vvg~~Gi~~i~~~-~L~~~e~~l~~~~~~~  390 (450)
T 1s6y_A          315 GGAYYSDAACSLISSIYNDKR---DIQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAVG-DLPVAVRGLVQQIKSF  390 (450)
T ss_dssp             CSCCHHHHHHHHHHHHHHTCC---CEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCB-CCCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHcCCC---eEEEEEeecCceecCCCCCeEEEEeEEEcCCCeEEeecC-CCCHHHHHHHHHHHHH
Confidence            344667999999999999976   478887 688987   58999999999999999999995 9999999999999887


Q ss_pred             HHHHHHHhh
Q 018618          340 LAGSIQKGI  348 (353)
Q Consensus       340 l~~~~~~~~  348 (353)
                      -+-.++.++
T Consensus       391 e~l~veAa~  399 (450)
T 1s6y_A          391 ERVAAEAAV  399 (450)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            776666654

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=100.00  E-value=1.5e-39  Score=325.03  Aligned_cols=291  Identities=15%  Similarity=0.184  Sum_probs=218.8

Q ss_pred             CCeEEEEcCCCCc-HHHHHHHHHhC--CC-CcEEEEEeCCC--cHHHHHHHhcC-----CCCCeEEEEeCCCchhhhhCC
Q 018618           41 GFKVAILGAAGGI-GQPLAMLMKIN--PL-VSVLHLYDVVN--TPGVTADISHM-----DTGAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        41 ~~KI~IiGa~G~v-G~~la~~l~~~--~~-~~el~L~D~~~--~~~~~~dl~~~-----~~~~~v~~~~~t~d~~~al~~  109 (353)
                      ++||+|||| |++ +..++..|+..  ++ ..||+|+|+++  +++ ..|+.+.     .....+..   ++|+++|++|
T Consensus        28 ~~KIaVIGa-Gsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~-~~~~~~~~l~~~~~~~~I~~---t~D~~eal~~  102 (472)
T 1u8x_X           28 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDR-IAGACDVFIREKAPDIEFAA---TTDPEEAFTD  102 (472)
T ss_dssp             CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHH-HHHHHHHHHHHHCTTSEEEE---ESCHHHHHSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHH-HHHHHHHHhccCCCCCEEEE---ECCHHHHHcC
Confidence            359999999 888 55577777776  67 78999999987  333 2344332     12345554   4688899999


Q ss_pred             CcEEEEcCCCCCCCCCCH--------------------HHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHH
Q 018618          110 MDLVIIPAGVPRKPGMTR--------------------DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAA  169 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r--------------------~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~  169 (353)
                      ||+||++++.++++|++|                    .+++.+|+++++++++.|+++||+||+|++|||+|++|+++ 
T Consensus       103 AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~T~~~-  181 (472)
T 1u8x_X          103 VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEAT-  181 (472)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHH-
T ss_pred             CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-
Confidence            999999999987777777                    44589999999999999999999999999999999997654 


Q ss_pred             HHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCC-CCCcceEEe-----------e-cCCCccccccccCCC-----
Q 018618          170 EVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDP-RDVDVPVVG-----------G-HAGVTILPLLSQVKP-----  231 (353)
Q Consensus       170 ~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~-~~v~~~viG-----------~-hg~~~~vp~~s~~~v-----  231 (353)
                         ++.+  |++||||+|... .|+++.+|+.+|+++ ++|+++++|           + ||+ +++|.|+...+     
T Consensus       182 ---~k~~--p~~rViG~c~~~-~r~~~~la~~lgv~~~~~v~~~v~GlNH~~W~~~~~~~hG~-d~~p~~~~~~~~~g~~  254 (472)
T 1u8x_X          182 ---RRLR--PNSKILNICDMP-VGIEDRMAQILGLSSRKEMKVRYYGLNHFGWWTSIQDQEGN-DLMPKLKEHVSQYGYI  254 (472)
T ss_dssp             ---HHHS--TTCCEEECCSHH-HHHHHHHHHHHTCSCGGGEEEEEEEETTEEEEEEEEETTCC-BCHHHHHHHHHHHSSC
T ss_pred             ---HHhC--CCCCEEEeCCcH-HHHHHHHHHHhCcCchhceeEEEeccchhhheeeeEeCCCC-EehHhHHHHHHhcCCC
Confidence               6664  788999997654 499999999999998 999999999           8 999 99999987321     


Q ss_pred             C--------CCCChHH--------------------H----HHHHHH----------Hhc-chhhhhhhhc-c--CC---
Q 018618          232 P--------CSFTQEE--------------------T----EYLTNR----------IQN-GGTEVVEAKA-G--AG---  262 (353)
Q Consensus       232 ~--------~~~~~~~--------------------~----~el~~~----------v~~-~~~~i~~~~~-g--kg---  262 (353)
                      +        ..+..+-                    |    +++.++          +++ ...++.+... +  +|   
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~Yl~yy~~~~~~~e~~~~~~~r~~~v~~~~~~~~~~~~~~~~~~~~~~  334 (472)
T 1u8x_X          255 PKTEAEAVEASWNDTFAKARDVQAADPDTLPNTYLQYYLFPDDMVKKSNPNHTRANEVMEGREAFIFSQCDMITREQSSE  334 (472)
T ss_dssp             CCC-------CTTSHHHHHHHHHHTSTTSEECGGGHHHHSHHHHHTTSCSSSCHHHHHHHHTTTTTTTTHHHHHHHTSCC
T ss_pred             ccccccccccchHHHHHhhcCccccccccCCccchhcccCCHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhcCCcc
Confidence            1        0011000                    0    111111          112 2222222110 2  34   


Q ss_pred             cccc---hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018618          263 SATL---SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  335 (353)
Q Consensus       263 ~~~~---s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~  335 (353)
                      .+.|   +++.+++++++||++|++   .+++++ +++|.|   |+|+++|+||+||++|+.++... +|+++|+++++.
T Consensus       335 ~~~~~~~~~~~~a~~ii~AI~~d~~---~v~~vsv~n~G~i~glp~d~~veVP~vvg~~Gi~pi~~~-~Lp~~~~~l~~~  410 (472)
T 1u8x_X          335 NSEIKIDDHASYIVDLARAIAYNTG---ERMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITVG-TIPQFQKGLMEQ  410 (472)
T ss_dssp             SCSSCCCTTTHHHHHHHHHHHHTCC---EEEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCCB-CCCHHHHHHHHH
T ss_pred             cccccccHHHHHHHHHHHHHhcCCC---eEEEEEeecCceecCcCCCeEEEEeEEEcCCCceEeecC-CCCHHHHHHHHH
Confidence            3444   899999999999999865   588887 688987   58999999999999999999995 999999999988


Q ss_pred             HHHHHHHHHHHhh
Q 018618          336 AKKELAGSIQKGI  348 (353)
Q Consensus       336 s~~~l~~~~~~~~  348 (353)
                      -...-+-.++.++
T Consensus       411 ~~~~e~l~veAa~  423 (472)
T 1u8x_X          411 QVSVEKLTVEAWA  423 (472)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            7666555555544

>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}

Probab=99.98  E-value=3.1e-31  Score=262.95  Aligned_cols=285  Identities=19%  Similarity=0.223  Sum_probs=196.4

Q ss_pred             CCCeEEEEcCCCCcH--HHHHHHHHhCC-CCcEEEEEeCCC--cH--HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcE
Q 018618           40 AGFKVAILGAAGGIG--QPLAMLMKINP-LVSVLHLYDVVN--TP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDL  112 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG--~~la~~l~~~~-~~~el~L~D~~~--~~--~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADi  112 (353)
                      +++||+|||| |++|  ..++..|+... +..+|+|+|+++  ++  ....+.  ... ...++. .|+|+++|++|||+
T Consensus         4 ~~~KIaVIGa-Gs~g~g~~la~~l~~~~~~~geV~L~Di~~e~le~~~~~~~~--l~~-~~~~I~-~TtD~~eAl~dADf   78 (450)
T 3fef_A            4 DQIKIAYIGG-GSQGWARSLMSDLSIDERMSGTVALYDLDFEAAQKNEVIGNH--SGN-GRWRYE-AVSTLKKALSAADI   78 (450)
T ss_dssp             CCEEEEEETT-TCSSHHHHHHHHHHHCSSCCEEEEEECSSHHHHHHHHHHHTT--STT-SCEEEE-EESSHHHHHTTCSE
T ss_pred             CCCEEEEECC-ChhHhHHHHHHHHHhccccCCeEEEEeCCHHHHHHHHHHHHH--Hhc-cCCeEE-EECCHHHHhcCCCE
Confidence            3579999999 9985  57777776543 335999999987  21  112221  111 233332 35799999999999


Q ss_pred             EEEcCC------------CCCCCCCCHH----------HHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHH
Q 018618          113 VIIPAG------------VPRKPGMTRD----------DLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  170 (353)
Q Consensus       113 VIi~ag------------~~~~~g~~r~----------~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~  170 (353)
                      ||++..            .|+++|+.|.          ....+|++++.++++.|+++||+||+|++|||+|++|+++  
T Consensus        79 VI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNPvdi~t~~~--  156 (450)
T 3fef_A           79 VIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNPMSVCTRVL--  156 (450)
T ss_dssp             EEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH--
T ss_pred             EEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHH--
Confidence            999974            4788887554          4556999999999999999999999999999999998654  


Q ss_pred             HHHHhCCCCCCceEeechhhHHHHHHHHHHHh----C---CCCCCCcceEEe-ecCC---------Cccccc--------
Q 018618          171 VFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL----G---LDPRDVDVPVVG-GHAG---------VTILPL--------  225 (353)
Q Consensus       171 ~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l----~---v~~~~v~~~viG-~hg~---------~~~vp~--------  225 (353)
                        ++.  +|+.|+||+|+.. .++++.+|+.|    |   +++++|+..++| ||..         ++..|.        
T Consensus       157 --~k~--~p~~rviG~C~~~-~~~~~~~a~~l~~~lg~~~~~~~~v~~~~~GlNH~~w~~~~~~~G~d~~p~l~~~~~~~  231 (450)
T 3fef_A          157 --YKV--FPGIKAIGCCHEV-FGTQKLLAEMVTERLGIEVPRREDIRVNVLGINHFTWITKASYRHIDLLPIFREFSAHY  231 (450)
T ss_dssp             --HHH--CTTCEEEECCSHH-HHHHHHHHHHHHHHHCCCCSCGGGEEEEEEEETTEEEEEEEEETTEEHHHHHHHHHHHH
T ss_pred             --HHH--CCCCCEEEeCCcH-HHHHHHHHHHHHhhcCCCCCChhHeEEEEeeecCeEeEEEEEECCEEChHHHHHHHHhh
Confidence              554  6889999999876 68999999999    5   779999999999 6643         123331        


Q ss_pred             -----------cccC-----------------------------CCCCCC-----------ChHHH--HHH---HHHHhc
Q 018618          226 -----------LSQV-----------------------------KPPCSF-----------TQEET--EYL---TNRIQN  249 (353)
Q Consensus       226 -----------~s~~-----------------------------~v~~~~-----------~~~~~--~el---~~~v~~  249 (353)
                                 |...                             +.+..|           +...|  +++   .++..+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~ey~p~~Y~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~  311 (450)
T 3fef_A          232 GESGYELEGECWRDSVFCSAHRVAFDLFETYGAIPAAGDRHLAEFLPGPYLKQPEVWKFHLTPISFRKQDRAEKRQETER  311 (450)
T ss_dssp             TTTCCCCTTCCTTSCTTCCCSHHHHHHHHHHSSEECSCHHHHTTSSCSSGGGCTTTTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhhHHHHHHHHHcCCcccccccchhcccchhhcCCHHHhcccccchhhHHHHHHHHHHHHHH
Confidence                       1000                             000000           00000  000   011000


Q ss_pred             c--hhhhhhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCC
Q 018618          250 G--GTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLG  323 (353)
Q Consensus       250 ~--~~~i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~  323 (353)
                      .  +..-++   -+++     +.+++++++||++|++   .+++++ .++|.|   |+|+++|+||++|++|+.++.. +
T Consensus       312 ~~~~~~~~~---~~~~-----~e~~~~ii~aI~~d~~---~~~~vnv~n~G~i~~lp~d~~vevP~~v~~~Gi~pi~~-g  379 (450)
T 3fef_A          312 LIVQQRGVA---EKAS-----GEEGVNIIAALLGLGE---LVTNVNMPNQGQVLNLPIQAIVETNAFITRNRVQPILS-G  379 (450)
T ss_dssp             HHHTTCCCC---CSCC-----SCCHHHHHHHHTTSCC---EEEEEEEECSSSSTTSCTTSEEEEEEEEETTEEEEBCC-C
T ss_pred             HhcCCcCcC---cCcc-----HHHHHHHHHHHHcCCC---eEEEEEeecCcEecCCCCCeEEEEEEEEcCCCceeccc-C
Confidence            0  000000   0111     3457899999999865   577776 688986   6799999999999999999988 5


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhh
Q 018618          324 PLNEYERIGLEKAKKELAGSIQKGI  348 (353)
Q Consensus       324 ~L~~~E~~~l~~s~~~l~~~~~~~~  348 (353)
                      +|++.+++++..-...-+-.++.++
T Consensus       380 ~Lp~~~~~l~~~~~~~e~l~veAa~  404 (450)
T 3fef_A          380 ALPKGVEMLAARHISNQEAVADAGL  404 (450)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999876665555555544

>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2

Probab=99.96  E-value=6e-29  Score=248.38  Aligned_cols=290  Identities=18%  Similarity=0.149  Sum_probs=192.3

Q ss_pred             CCeEEEEcCCCCcHHHH--HHHHHhC-CC-CcEEEEEeCCC--cHHHHHHHh-----cCCCCCeEEEEeCCCchhhhhCC
Q 018618           41 GFKVAILGAAGGIGQPL--AMLMKIN-PL-VSVLHLYDVVN--TPGVTADIS-----HMDTGAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~l--a~~l~~~-~~-~~el~L~D~~~--~~~~~~dl~-----~~~~~~~v~~~~~t~d~~~al~~  109 (353)
                      ++||+|||| |+||++.  +..|++. ++ ..+|+|+|+++  +++ +.++.     +......++.   ++|+++|++|
T Consensus         3 ~~KIaVIGA-GsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~-~~~~~~~~l~~~~~~~~I~~---ttD~~eal~d   77 (480)
T 1obb_A            3 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDA-ILTIAKKYVEEVGADLKFEK---TMNLDDVIID   77 (480)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHH-HHHHHHHHHHHTTCCCEEEE---ESCHHHHHTT
T ss_pred             CCEEEEECC-CchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHH-HHHHHHHHhccCCCCcEEEE---ECCHHHHhCC
Confidence            579999999 9986555  5577643 44 56999999987  333 22221     2222334554   4688889999


Q ss_pred             CcEEEEcCCC------------CCCCCCCH--HH------------HHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618          110 MDLVIIPAGV------------PRKPGMTR--DD------------LFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  163 (353)
Q Consensus       110 ADiVIi~ag~------------~~~~g~~r--~~------------~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  163 (353)
                      ||+||++++.            |.++|+.|  .+            ++.+|+++++++++.|+++||+||+|++|||+++
T Consensus        78 AD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi  157 (480)
T 1obb_A           78 ADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFE  157 (480)
T ss_dssp             CSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHH
T ss_pred             CCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHH
Confidence            9999999975            44555544  33            4789999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe-ecCC---------Ccccc---------
Q 018618          164 TVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG-GHAG---------VTILP---------  224 (353)
Q Consensus       164 ~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG-~hg~---------~~~vp---------  224 (353)
                      +|+++    ++   +|++||||+|.++. ++++++ +.+|+++++|+++|+| +|..         ++.+|         
T Consensus       158 ~t~~~----~k---~p~~rviG~c~~~~-~~~~~l-~~lgv~~~~v~~~v~GlNH~~w~~~~~~~G~D~~p~l~~~~~~~  228 (480)
T 1obb_A          158 GTTLV----TR---TVPIKAVGFCHGHY-GVMEIV-EKLGLEEEKVDWQVAGVNHGIWLNRFRYNGGNAYPLLDKWIEEK  228 (480)
T ss_dssp             HHHHH----HH---HSCSEEEEECSGGG-HHHHHH-HHTTCCGGGEEEEEEEETTEEEEEEEEETTEECHHHHHHHHHHT
T ss_pred             HHHHH----HH---CCCCcEEecCCCHH-HHHHHH-HHhCCCHHHceEEEEeecchhhhhheeeCCeEcHHHHHHHHHcc
Confidence            98654    55   68899999975443 478999 9999999999999999 4432         11111         


Q ss_pred             --------cccc--CC-----------CCC-------CCC-------------------hH-----H----HHHHHHHHh
Q 018618          225 --------LLSQ--VK-----------PPC-------SFT-------------------QE-----E----TEYLTNRIQ  248 (353)
Q Consensus       225 --------~~s~--~~-----------v~~-------~~~-------------------~~-----~----~~el~~~v~  248 (353)
                              .|+.  ..           ++.       .+.                   ++     +    +.+..+.+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~h~~~y~~~~~~~~~~yyy~~~~~~~~~~~~~~~~~~~~~e~~~~~e  308 (480)
T 1obb_A          229 SKDWKPENPFNDQLSPAAIDMYRFYGVMPIGDTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQDTLGKVTEITK  308 (480)
T ss_dssp             GGGCCCSSTTCCTTSHHHHHHHHHHSSCEEGGGTTSCCGGGGSSHHHHHHHHCTTTTSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccccccccchhhhHHHHHHHhcCCeecCCCCCCcCcccccccCccccccchhhcccccccccHhHHHHHHHHHHHHH
Confidence                    1322  11           011       111                   10     1    111111111


Q ss_pred             cchhhhhhhhccCC--------cccc----------------hHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---C
Q 018618          249 NGGTEVVEAKAGAG--------SATL----------------SMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---T  300 (353)
Q Consensus       249 ~~~~~i~~~~~gkg--------~~~~----------------s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~  300 (353)
                      +.-+++.+...-+.        .++|                ..+..++++++||++|++   .++.++ .++|.+   |
T Consensus       309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ge~a~~ii~ai~~~~~---~~~~vnv~N~G~I~~lp  385 (480)
T 1obb_A          309 KVAKFIKENPSVRLSDLGSVLGKDLSEKQFVLEVEKILDPERKSGEQHIPFIDALLNDNK---ARFVVNIPNKGIIHGID  385 (480)
T ss_dssp             HHHHHHHHCTTCCGGGCSSSSCCSHHHHHHHHHHHHHHCTTCCCSCSHHHHHHHHHHCCC---EEEEEEEECTTSSTTSC
T ss_pred             HHHHHHhcCCccccccccccccccccccccccccccccccchhhhHHHHHHHHHHHhCCC---eEEEEEeeCCceeCCCC
Confidence            11111211110000        0111                112567899999999876   355554 577875   8


Q ss_pred             CccEEEEEEEEcCCceEEEccCCC-CCHHHHHH-HHHHHHHHHHHHHHhh
Q 018618          301 ELPFFASKVRLGRQGAEEIFQLGP-LNEYERIG-LEKAKKELAGSIQKGI  348 (353)
Q Consensus       301 ~~~~~s~Pv~ig~~Gv~~v~~~~~-L~~~E~~~-l~~s~~~l~~~~~~~~  348 (353)
                      +++++++||+++++|+.++.. ++ |++..+++ +..-...-+-.++.++
T Consensus       386 ~d~vVEvp~~v~~~G~~p~~~-g~~lP~~~~~l~~~~~~~~e~l~veA~~  434 (480)
T 1obb_A          386 DDVVVEVPALVDKNGIHPEKI-EPPLPDRVVKYYLRPRIMRMEMALEAFL  434 (480)
T ss_dssp             TTSEEEEEEEEETTEEEECCC-SSCCCHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEEEEcCCCCEeecc-CCCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999887 58 99999999 7776555554454443

>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*

Probab=99.96  E-value=1.8e-28  Score=245.71  Aligned_cols=167  Identities=23%  Similarity=0.235  Sum_probs=126.0

Q ss_pred             CeEEEEcCCCCcHHHHH--HHHHhCC----CCcEEEEEeCCC--cHHHHHHHhcCC--CCCeEEEEeCCCchhhhhCCCc
Q 018618           42 FKVAILGAAGGIGQPLA--MLMKINP----LVSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la--~~l~~~~----~~~el~L~D~~~--~~~~~~dl~~~~--~~~~v~~~~~t~d~~~al~~AD  111 (353)
                      |||+|||| |++|++..  ..++...    ..++|+|+|+++  +++...++.+..  .....++. .++|+++|++|||
T Consensus         1 mKI~iIGa-Gs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~~~~~~i~-~t~d~~eAl~gAD   78 (477)
T 3u95_A            1 MKISIVGA-GSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEELNSPVKVV-KTESLDEAIEGAD   78 (477)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHHTCCCEEE-EESCHHHHHTTCS
T ss_pred             CEEEEECC-CchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHcCCCeEEE-EeCCHHHHhCCCC
Confidence            79999999 99988753  3455432    247999999988  555555655542  12233332 2579999999999


Q ss_pred             EEEEcCCC-------------------CCCCCCCHHHHH---------------HHHHHHHHHHHHHHHhhCCCcEEEEe
Q 018618          112 LVIIPAGV-------------------PRKPGMTRDDLF---------------NINAGIVRTLCEGIAKCCPNATVNLI  157 (353)
Q Consensus       112 iVIi~ag~-------------------~~~~g~~r~~~~---------------~~N~~i~~~i~~~i~~~~p~a~viv~  157 (353)
                      |||+++|.                   |+++|++|.++.               .+|++++.++++.|+++||+||+|++
T Consensus        79 ~Vi~~~g~~~~Rvg~~~~r~~de~~~ip~k~G~~~~~l~qet~g~gG~~~~lR~~~~i~v~~~i~~~i~~~~P~A~~in~  158 (477)
T 3u95_A           79 FIINTAYPYDPRYHDSGSQRWDEVTKVGEKHGYYRGIDSQELNMVSTYTYVLSSYPDVKLALEIAEKMKKMAPKAYLMQT  158 (477)
T ss_dssp             EEEECCCCCCTTTCSSHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTSCSTTTTHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EEEECcccccccccccccccceeeeccCcccceeecccccccCCccchhHHHhhhhhHHHHHHHHHHHHhhCCCeEEEEe
Confidence            99999874                   236666654432               36899999999999999999999999


Q ss_pred             cCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEeecCC
Q 018618          158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAG  219 (353)
Q Consensus       158 tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~  219 (353)
                      |||++++|+.+    +++++   .|++|+|+-...  ...+++.||+++++|+..+.|-|+.
T Consensus       159 tNP~~i~t~a~----~~~~~---~k~vGlC~~~~~--~~~~~~~Lg~~~~~v~~~~~GlNH~  211 (477)
T 3u95_A          159 ANPVFEITQAV----RRWTG---ANIIGFCHGVAG--VYEVFERLGLDPEEVDWQVAGVNHG  211 (477)
T ss_dssp             SSCHHHHHHHH----HHHHC---CCEEEECCGGGH--HHHHHHHTTCCGGGEEEEEEEETTE
T ss_pred             cChHHHHHHHH----HHhCC---CCeEEECCCHHH--HHHHHHHhCCCHHHcEEEEeecCCC
Confidence            99999998754    45544   589999975543  3557788999999999999996654

>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*

Probab=98.77  E-value=4.5e-08  Score=92.84  Aligned_cols=119  Identities=17%  Similarity=0.209  Sum_probs=86.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c--HHH--H----HHHhcCC-C----C-----CeEEEEeCCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--T----ADISHMD-T----G-----AVVRGFLGQPQ  102 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~--~~~--~----~dl~~~~-~----~-----~~v~~~~~t~d  102 (353)
                      .||+|||| |.+|+.+|..++..|+  +|+|+|+++ .  .+.  .    ..+.... .    .     ..++.   ++|
T Consensus         7 ~~VaViGa-G~MG~giA~~~a~~G~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~---~~~   80 (319)
T 3ado_A            7 GDVLIVGS-GLVGRSWAMLFASGGF--RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS---CTN   80 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE---ECC
T ss_pred             CeEEEECC-cHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc---ccc
Confidence            49999999 9999999999999999  999999987 1  111  1    1111111 0    0     12443   468


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      +++++++||+||.++              .+|+++.+++..++.+++ |+++  +.||.+.+...-+   . .... .|+
T Consensus        81 l~~a~~~ad~ViEav--------------~E~l~iK~~lf~~l~~~~~~~aI--laSNTSsl~is~i---a-~~~~-~p~  139 (319)
T 3ado_A           81 LAEAVEGVVHIQECV--------------PENLDLKRKIFAQLDSIVDDRVV--LSSSSSCLLPSKL---F-TGLA-HVK  139 (319)
T ss_dssp             HHHHTTTEEEEEECC--------------CSCHHHHHHHHHHHHTTCCSSSE--EEECCSSCCHHHH---H-TTCT-TGG
T ss_pred             hHhHhccCcEEeecc--------------ccHHHHHHHHHHHHHHHhhhcce--eehhhhhccchhh---h-hhcc-CCC
Confidence            889999999999985              678999999999999999 5774  4999988765332   2 3333 467


Q ss_pred             ceEeec
Q 018618          182 KLLGVT  187 (353)
Q Consensus       182 kviG~t  187 (353)
                      |++|+.
T Consensus       140 r~ig~H  145 (319)
T 3ado_A          140 QCIVAH  145 (319)
T ss_dssp             GEEEEE
T ss_pred             cEEEec
Confidence            888874

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=98.62  E-value=8.6e-08  Score=100.47  Aligned_cols=138  Identities=16%  Similarity=0.208  Sum_probs=94.6

Q ss_pred             cccchhhhhhhhcccC-----------CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--H---
Q 018618           22 NLQNSCLRQAKCRAKG-----------GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--T---   82 (353)
Q Consensus        22 ~~~~~~~~~~~~~~~~-----------~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~---   82 (353)
                      ++...||-+++.++..           ..+-.||+|+|| |.+|+.+|..++..|+  +|+|+|+++  + .+.  .   
T Consensus       286 ~~~~aFf~~r~~~k~~~~~~~~~~~~~~~~i~~v~ViGa-G~MG~gIA~~~a~aG~--~V~l~D~~~~~l~~~~~~i~~~  362 (742)
T 3zwc_A          286 ALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGL-GTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFT  362 (742)
T ss_dssp             HHHHHHHHHHHTTSCBCTTCCBTTTCCCCCCCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhcccccccccccccccCcccccEEEEEcc-cHHHHHHHHHHHhCCC--chhcccchHhhhhhHHHHHHHH
Confidence            4555677666654421           122369999999 9999999999999999  999999987  1 111  0   


Q ss_pred             H-----HHhcC--C-CCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcE
Q 018618           83 A-----DISHM--D-TGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNAT  153 (353)
Q Consensus        83 ~-----dl~~~--~-~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~  153 (353)
                      +     .....  . ....++.   ++++ +++++||+||.+.              .+|+++.+++.+++++++ |++ 
T Consensus       363 l~~~~~~~~~~~~~~~~~~~~~---~~~~-~~l~~aDlVIEAV--------------~E~l~iK~~vf~~le~~~~~~a-  423 (742)
T 3zwc_A          363 LEKEASRAHQNGQASAKPKLRF---SSST-KELSTVDLVVEAV--------------FEDMNLKKKVFAELSALCKPGA-  423 (742)
T ss_dssp             HHHHHHHHHTTTCCCCCCCEEE---ESCG-GGGGSCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTC-
T ss_pred             HHHHHHhccccchhhhhhhhcc---cCcH-HHHhhCCEEEEec--------------cccHHHHHHHHHHHhhcCCCCc-
Confidence            0     01111  1 1233443   3454 6799999999985              678999999999999999 577 


Q ss_pred             EEEecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618          154 VNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       154 viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                       |+.||.+.+-..-++    .... .|+|++|+.
T Consensus       424 -IlASNTSsl~i~~ia----~~~~-~p~r~ig~H  451 (742)
T 3zwc_A          424 -FLCTNTSALNVDDIA----SSTD-RPQLVIGTH  451 (742)
T ss_dssp             -EEEECCSSSCHHHHH----TTSS-CGGGEEEEE
T ss_pred             -eEEecCCcCChHHHH----hhcC-Ccccccccc
Confidence             449999886653322    3333 467888874

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=98.44  E-value=5.5e-07  Score=85.06  Aligned_cols=187  Identities=12%  Similarity=0.056  Sum_probs=101.9

Q ss_pred             HhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeE
Q 018618           15 SAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV   94 (353)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v   94 (353)
                      +.|--|-+.||..+++         .+|||.|+||+|++|++++..|+..|...+|+.+|..........+......+.+
T Consensus         7 ~~~~~~~~~~n~~~~~---------~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~   77 (346)
T 4egb_A            7 HSSGVDLGTENLYFQS---------NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNY   77 (346)
T ss_dssp             --------------------------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTE
T ss_pred             cccccccCcccccccc---------CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCe
Confidence            3444566677777654         3469999999999999999999988844488888876411111122222112334


Q ss_pred             EEEeCC----CchhhhhCC--CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC-----
Q 018618           95 RGFLGQ----PQLENALTG--MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV-----  161 (353)
Q Consensus        95 ~~~~~t----~d~~~al~~--ADiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv-----  161 (353)
                      ..+...    .++.+++++  +|+||.+++.....  ..+..+.+..|+.....+++.+.+....-+|.+.|--+     
T Consensus        78 ~~~~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~  157 (346)
T 4egb_A           78 YFVKGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLG  157 (346)
T ss_dssp             EEEECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCC
T ss_pred             EEEEcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCC
Confidence            443221    234466666  99999998864321  12345677899999999999999876543443333211     


Q ss_pred             --CchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          162 --NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       162 --~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                        ..++        ......+...+|.+.....++-..+++..|++..-++ +.++|...
T Consensus       158 ~~~~~~--------E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  209 (346)
T 4egb_A          158 KTGRFT--------EETPLAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQ  209 (346)
T ss_dssp             SSCCBC--------TTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred             cCCCcC--------CCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCC
Confidence              1110        1112233455666666666666777777787765554 56777543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=98.42  E-value=2.1e-06  Score=81.23  Aligned_cols=191  Identities=15%  Similarity=0.046  Sum_probs=112.7

Q ss_pred             hcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC---C
Q 018618           17 HLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT---G   91 (353)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~---~   91 (353)
                      |-||+.++..--.+..       .++||.|+||+|++|++++..|+..|.  +|+.+|+..  ......++.....   .
T Consensus         8 ~~~~~~~~~~~~~~~~-------~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~   78 (351)
T 3ruf_A            8 DIYMSRYEEITQQLIF-------SPKTWLITGVAGFIGSNLLEKLLKLNQ--VVIGLDNFSTGHQYNLDEVKTLVSTEQW   78 (351)
T ss_dssp             --CCHHHHHHHHHHHH-------SCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHTSCHHHH
T ss_pred             hHHHHHHhhHHhhCCC-------CCCeEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCCCchhhhhhhhhccccccC
Confidence            4566666554433321       346999999999999999999999987  999999865  2223333332110   0


Q ss_pred             CeEEEEeC----CCchhhhhCCCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchh
Q 018618           92 AVVRGFLG----QPQLENALTGMDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV  165 (353)
Q Consensus        92 ~~v~~~~~----t~d~~~al~~ADiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t  165 (353)
                      ..+..+..    ..++.++++++|+||.+++.....  ..+..+.+..|+.....+++.+.+....-+|.+.|--+....
T Consensus        79 ~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~  158 (351)
T 3ruf_A           79 SRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDH  158 (351)
T ss_dssp             TTEEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTC
T ss_pred             CceEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCC
Confidence            22333221    123567789999999999853211  123455678899999999999998765544444332111000


Q ss_pred             HHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          166 PIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       166 ~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      .  ...+....-..+...+|.+.+...++-..+++..|++..-++ +.++|...
T Consensus       159 ~--~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          159 P--ALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             C--CSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTC
T ss_pred             C--CCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCC
Confidence            0  000001111223345666666666676777777788766664 56888544

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=98.42  E-value=4.9e-07  Score=85.46  Aligned_cols=156  Identities=16%  Similarity=0.171  Sum_probs=99.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +.+||.|+||+|++|++++..|+..|.  +|+.+|++...      ...   ..+.. +....++.++++++|+||.+++
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~------~~~---~~~~~Dl~d~~~~~~~~~~~d~vih~A~   86 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGR--TVRGFDLRPSG------TGG---EEVVGSLEDGQALSDAIMGVSAVLHLGA   86 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTC--CEEEEESSCCS------SCC---SEEESCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCC--EEEEEeCCCCC------CCc---cEEecCcCCHHHHHHHHhCCCEEEECCc
Confidence            356999999999999999999999987  89999987522      000   11111 0011345678899999999998


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC--------CchhHHHHHHHHHhCCCCCCceEeechhh
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV--------NSTVPIAAEVFKKAGTYDPKKLLGVTMLD  190 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv--------~~~t~~~~~~~~~~~~~~~~kviG~t~ld  190 (353)
                      ..........+.+..|+.....+++.+.+....-+|.+.|.-+        ..++        .....++...+|.+...
T Consensus        87 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~--------E~~~~~~~~~Y~~sK~~  158 (347)
T 4id9_A           87 FMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVT--------EDHPLCPNSPYGLTKLL  158 (347)
T ss_dssp             CCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBC--------TTSCCCCCSHHHHHHHH
T ss_pred             ccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcC--------CCCCCCCCChHHHHHHH
Confidence            6543333446778899999999999998866444444444111        1111        11123444556666666


Q ss_pred             HHHHHHHHHHHhCCCCCCCc-ceEE
Q 018618          191 VVRANTFVAEVLGLDPRDVD-VPVV  214 (353)
Q Consensus       191 ~~R~~~~lA~~l~v~~~~v~-~~vi  214 (353)
                      ..++-..+++..+++..-++ +.++
T Consensus       159 ~E~~~~~~~~~~~~~~~ilRp~~v~  183 (347)
T 4id9_A          159 GEELVRFHQRSGAMETVILRFSHTQ  183 (347)
T ss_dssp             HHHHHHHHHHHSSSEEEEEEECEEE
T ss_pred             HHHHHHHHHHhcCCceEEEccceEe
Confidence            66666667777777655553 4566

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=98.42  E-value=1.4e-06  Score=86.81  Aligned_cols=136  Identities=15%  Similarity=0.186  Sum_probs=84.1

Q ss_pred             ccchhhhhhhhccc--------CC---CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHH-----
Q 018618           23 LQNSCLRQAKCRAK--------GG---AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTAD-----   84 (353)
Q Consensus        23 ~~~~~~~~~~~~~~--------~~---~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~d-----   84 (353)
                      |+-.||.++.+++.        ..   .+.+||+|||+ |.+|+.+|..|+..|+  +|+++|+++  +......     
T Consensus         8 l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~kV~VIGa-G~MG~~iA~~la~~G~--~V~l~D~~~~~~~~~~~~i~~~l   84 (463)
T 1zcj_A            8 LQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGL-GTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTL   84 (463)
T ss_dssp             HHHHHHGGGGGGSCBCTTCCBTTTCCCCCCCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCccCCCccccccCCCCEEEEECc-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHH
Confidence            44456777776661        11   12468999999 9999999999999998  999999986  1111000     


Q ss_pred             --------HhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEE
Q 018618           85 --------ISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATV  154 (353)
Q Consensus        85 --------l~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~v  154 (353)
                              +..... ....+.   ++|+ +++++||+||++..              ++..+.+++.+.+..++ |+++|
T Consensus        85 ~~~~~~g~~~~~~~~~~~~~i---~~~~-~~~~~aDlVIeaVp--------------e~~~~k~~v~~~l~~~~~~~~ii  146 (463)
T 1zcj_A           85 EKEASRAHQNGQASAKPKLRF---SSST-KELSTVDLVVEAVF--------------EDMNLKKKVFAELSALCKPGAFL  146 (463)
T ss_dssp             HHHHHHHHHTTCCCCCCCEEE---ESCG-GGGTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEE
T ss_pred             HHHHHcCCCCHHHHHHHHhhh---cCCH-HHHCCCCEEEEcCC--------------CCHHHHHHHHHHHHhhCCCCeEE
Confidence                    111111 112232   3566 67999999999862              24556677777888887 46654


Q ss_pred             EEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          155 NLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       155 iv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                        +||.+.+-+.-+    ..... .+.+++|+
T Consensus       147 --~snTs~~~~~~l----a~~~~-~~~~~ig~  171 (463)
T 1zcj_A          147 --CTNTSALNVDDI----ASSTD-RPQLVIGT  171 (463)
T ss_dssp             --EECCSSSCHHHH----HTTSS-CGGGEEEE
T ss_pred             --EeCCCCcCHHHH----HHHhc-CCcceEEe
Confidence              457766543222    22222 24567776

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=98.37  E-value=1.5e-06  Score=80.98  Aligned_cols=164  Identities=16%  Similarity=0.137  Sum_probs=99.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      |||.|+||+|++|++++..|+..|.  +|+.++++.....   +....   .+.. .. ..++.++++++|+||.+++..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~---~~~~~---~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~   73 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN--TPIILTRSIGNKA---INDYE---YRVSDYT-LEDLINQLNDVDAVVHLAATR   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCC--------CCE---EEECCCC-HHHHHHHTTTCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCCCCccc---CCceE---EEEcccc-HHHHHHhhcCCCEEEEccccC
Confidence            6999999999999999999999988  9999998742111   22110   0110 11 234667889999999998865


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHH
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE  200 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~  200 (353)
                      ...  +..+....|+....++++.+.+....-+|.+.|.-+..-..  ...+.......+...+|.+.....++-..+++
T Consensus        74 ~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~--~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  149 (311)
T 3m2p_A           74 GSQ--GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDET--SLPWNEKELPLPDLMYGVSKLACEHIGNIYSR  149 (311)
T ss_dssp             CSS--SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGG--GCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCC--CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHH
Confidence            332  34455688999999999999987655444444422211100  00000111122334566666666666666777


Q ss_pred             HhCCCCCCCc-ceEEeecC
Q 018618          201 VLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       201 ~l~v~~~~v~-~~viG~hg  218 (353)
                      ..|++..-++ +.++|...
T Consensus       150 ~~g~~~~ilRp~~v~G~~~  168 (311)
T 3m2p_A          150 KKGLCIKNLRFAHLYGFNE  168 (311)
T ss_dssp             HSCCEEEEEEECEEECSCC
T ss_pred             HcCCCEEEEeeCceeCcCC
Confidence            7777655553 55777543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=98.37  E-value=4.2e-07  Score=84.54  Aligned_cols=100  Identities=17%  Similarity=0.263  Sum_probs=67.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHh--------cC--CC-------CCeEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADIS--------HM--DT-------GAVVRGFLGQP  101 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~--------~~--~~-------~~~v~~~~~t~  101 (353)
                      .+||+|||+ |.+|+.+|..++..|+  +|+++|+++  +......+.        ..  ..       ...+..   ++
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~---~~   77 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGF--AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY---SD   77 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE---ES
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE---eC
Confidence            359999999 9999999999999998  999999986  111111110        00  00       012333   35


Q ss_pred             chhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       102 d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      |+++++++||+||++..              .+.+..+++.+.+.+++ |++++  +||...
T Consensus        78 ~~~~~~~~aDlVi~av~--------------~~~~~~~~v~~~l~~~~~~~~il--~s~tS~  123 (283)
T 4e12_A           78 DLAQAVKDADLVIEAVP--------------ESLDLKRDIYTKLGELAPAKTIF--ATNSST  123 (283)
T ss_dssp             CHHHHTTTCSEEEECCC--------------SCHHHHHHHHHHHHHHSCTTCEE--EECCSS
T ss_pred             CHHHHhccCCEEEEecc--------------CcHHHHHHHHHHHHhhCCCCcEE--EECCCC
Confidence            77788999999999852              23455667777888877 56655  444443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=98.30  E-value=2.5e-06  Score=79.21  Aligned_cols=166  Identities=17%  Similarity=0.125  Sum_probs=100.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC---CCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG---QPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~---t~d~~~al~~ADiVIi~ag  118 (353)
                      |||.|+||+|++|++++..|+..|.  +|+.+|++.....  +..+    ..+..+..   ..++.+++++ |+||++++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~----~~~~~~~~Dl~d~~~~~~~~~-d~vih~A~   71 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGY--EVVVVDNLSSGRR--EFVN----PSAELHVRDLKDYSWGAGIKG-DVVFHFAA   71 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCCSSCCG--GGSC----TTSEEECCCTTSTTTTTTCCC-SEEEECCS
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCC--EEEEEeCCCCCch--hhcC----CCceEEECccccHHHHhhcCC-CEEEECCC
Confidence            6999999999999999999999988  9999998651100  0111    11111111   1124566677 99999998


Q ss_pred             CCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHH
Q 018618          119 VPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANT  196 (353)
Q Consensus       119 ~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~  196 (353)
                      .+..  ...+....+..|+.....+++.+.+....-+|.+.|.-+..-..-  ..+......++...+|.+.....++-.
T Consensus        72 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~--~~~~e~~~~~p~~~Y~~sK~~~e~~~~  149 (312)
T 3ko8_A           72 NPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADV--IPTPEEEPYKPISVYGAAKAAGEVMCA  149 (312)
T ss_dssp             SCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSS--SSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             CCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCC--CCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence            5432  123456677889999999999998876544444443211000000  000011123344556666666666777


Q ss_pred             HHHHHhCCCCCCCc-ceEEeecC
Q 018618          197 FVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       197 ~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      .+++.+|++..-++ +.++|...
T Consensus       150 ~~~~~~g~~~~~lrp~~v~g~~~  172 (312)
T 3ko8_A          150 TYARLFGVRCLAVRYANVVGPRL  172 (312)
T ss_dssp             HHHHHHCCEEEEEEECEEECTTC
T ss_pred             HHHHHhCCCEEEEeeccccCcCC
Confidence            77787887665554 46788643

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=98.28  E-value=3.3e-06  Score=79.17  Aligned_cols=172  Identities=16%  Similarity=0.046  Sum_probs=98.1

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH---HHHHHHhcCCCCCeEEEEeCC-C---chhhhhCC-
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGFLGQ-P---QLENALTG-  109 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~---~~~~dl~~~~~~~~v~~~~~t-~---d~~~al~~-  109 (353)
                      +++++||.|+||+|++|++++..|+..|.  +|+++|++...   ....++..   ...+..+... +   ++.+++++ 
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~   85 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGY--RVHGLVARRSSDTRWRLRELGI---EGDIQYEDGDMADACSVQRAVIKA   85 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCHHHHHTTC---GGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCCccccccchhhccc---cCceEEEECCCCCHHHHHHHHHHc
Confidence            46678999999999999999999999887  99999987521   11222211   1233332211 2   23455665 


Q ss_pred             -CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEe
Q 018618          110 -MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       110 -ADiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                       .|+||.+++.....  ..+..+.+..|+.....+++.+.+......+|.+|.. +..-..  ...+.......+...+|
T Consensus        86 ~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~--~~~~~E~~~~~p~~~Y~  163 (335)
T 1rpn_A           86 QPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQ--AERQDENTPFYPRSPYG  163 (335)
T ss_dssp             CCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCS--SSSBCTTSCCCCCSHHH
T ss_pred             CCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCC--CCCCCcccCCCCCChhH
Confidence             59999998854311  2345567788999999999999987643455555431 100000  00000111122334566


Q ss_pred             echhhHHHHHHHHHHHhCCCCCCCc-ceEEee
Q 018618          186 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGG  216 (353)
Q Consensus       186 ~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~  216 (353)
                      .+.....++-..+++.++++..-++ ..++|.
T Consensus       164 ~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp  195 (335)
T 1rpn_A          164 VAKLYGHWITVNYRESFGLHASSGILFNHESP  195 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECT
T ss_pred             HHHHHHHHHHHHHHHHcCCcEEEEeeCcccCC
Confidence            6655556666667777777644333 335564

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=98.26  E-value=3.5e-06  Score=75.32  Aligned_cols=110  Identities=16%  Similarity=0.128  Sum_probs=77.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCC-eEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGA-VVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~-~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      .|||.|+||+|++|++++..|++.|.  +|++++++.....  .+.+..  . .+....-+.++.+++.++|+||.++|.
T Consensus        21 ~~~ilVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~--~~~~~~--~~~~~~~Dl~~~~~~~~~~~D~vi~~ag~   94 (236)
T 3e8x_A           21 GMRVLVVGANGKVARYLLSELKNKGH--EPVAMVRNEEQGP--ELRERG--ASDIVVANLEEDFSHAFASIDAVVFAAGS   94 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHH--HHHHTT--CSEEEECCTTSCCGGGGTTCSEEEECCCC
T ss_pred             CCeEEEECCCChHHHHHHHHHHhCCC--eEEEEECChHHHH--HHHhCC--CceEEEcccHHHHHHHHcCCCEEEECCCC
Confidence            46999999999999999999999997  9999998763221  122111  1 111100014567889999999999986


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ...  .+....+..|+.....+++.+++.... .+|++|.
T Consensus        95 ~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS  131 (236)
T 3e8x_A           95 GPH--TGADKTILIDLWGAIKTIQEAEKRGIK-RFIMVSS  131 (236)
T ss_dssp             CTT--SCHHHHHHTTTHHHHHHHHHHHHHTCC-EEEEECC
T ss_pred             CCC--CCccccchhhHHHHHHHHHHHHHcCCC-EEEEEec
Confidence            532  345667788999999999999887644 4454443

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=98.24  E-value=5e-06  Score=82.49  Aligned_cols=119  Identities=17%  Similarity=0.255  Sum_probs=77.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHH-----H-HHhc-CCC--------CCeEEEEeCCCchhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVT-----A-DISH-MDT--------GAVVRGFLGQPQLEN  105 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~-----~-dl~~-~~~--------~~~v~~~~~t~d~~~  105 (353)
                      .+||+|||+ |.+|..+|..++..|+  +|+++|+++.++..     + .+.. ...        ...++.   ++|+ +
T Consensus        54 i~kVaVIGa-G~MG~~IA~~la~aG~--~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~---t~dl-~  126 (460)
T 3k6j_A           54 VNSVAIIGG-GTMGKAMAICFGLAGI--ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI---TSDF-H  126 (460)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE---ESCG-G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE---eCCH-H
Confidence            469999999 9999999999999998  99999998632210     1 1111 110        123444   3566 5


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceE
Q 018618          106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL  184 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kvi  184 (353)
                      ++++||+||.+.              .++..+.+++.+.+.+++ |++++  +||.+.+-..   ++ ..... .+.+++
T Consensus       127 al~~aDlVIeAV--------------pe~~~vk~~v~~~l~~~~~~~aIl--asnTSsl~i~---~i-a~~~~-~p~r~i  185 (460)
T 3k6j_A          127 KLSNCDLIVESV--------------IEDMKLKKELFANLENICKSTCIF--GTNTSSLDLN---EI-SSVLR-DPSNLV  185 (460)
T ss_dssp             GCTTCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTCEE--EECCSSSCHH---HH-HTTSS-SGGGEE
T ss_pred             HHccCCEEEEcC--------------CCCHHHHHHHHHHHHhhCCCCCEE--EecCCChhHH---HH-HHhcc-CCcceE
Confidence            899999999985              235667788888899888 56754  5665543322   21 12222 245777


Q ss_pred             eec
Q 018618          185 GVT  187 (353)
Q Consensus       185 G~t  187 (353)
                      |+.
T Consensus       186 G~H  188 (460)
T 3k6j_A          186 GIH  188 (460)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            764

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=98.23  E-value=5.4e-06  Score=82.22  Aligned_cols=108  Identities=18%  Similarity=0.203  Sum_probs=72.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC--CC--------------CCeEEEEeCCCchhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--DT--------------GAVVRGFLGQPQLEN  105 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~--~~--------------~~~v~~~~~t~d~~~  105 (353)
                      |||+|||+ |.||..+|..|+..|+  +|+++|+++.+.  ..+...  ..              ...++.   ++|+++
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~--~V~~~D~~~~~v--~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~---t~d~~e   74 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGA--NVRCIDTDRNKI--EQLNSGTIPIYEPGLEKMIARNVKAGRLRF---GTEIEQ   74 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHH--HHHHHTCSCCCSTTHHHHHHHHHHTTSEEE---ESCHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCC--EEEEEECCHHHH--HHHHcCCCcccCCCHHHHHHhhcccCcEEE---ECCHHH
Confidence            79999999 9999999999999998  999999986221  112211  00              123443   367888


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec-CCCCc
Q 018618          106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS-NPVNS  163 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t-NPv~~  163 (353)
                      ++++||+||++.+.|..++.      ..++..+.++++.+.++. ++.+|+..| .|.+.
T Consensus        75 a~~~aDvViiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt  128 (450)
T 3gg2_A           75 AVPEADIIFIAVGTPAGEDG------SADMSYVLDAARSIGRAMSRYILIVTKSTVPVGS  128 (450)
T ss_dssp             HGGGCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTH
T ss_pred             HHhcCCEEEEEcCCCcccCC------CcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcc
Confidence            89999999999877654322      223445666667777665 455555544 45443

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=98.22  E-value=3.3e-06  Score=79.23  Aligned_cols=175  Identities=14%  Similarity=0.058  Sum_probs=100.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-C---chhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-P---QLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~---d~~~al~~ADiVIi~  116 (353)
                      .|||.|+||+|++|++++..|+..|...+|+.+|+....+....+.+......+..+... +   ++++++.++|+||++
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   82 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL   82 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence            479999999999999999999887632389999975411000112211111233332221 2   244567899999999


Q ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechhhHHH
Q 018618          117 AGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR  193 (353)
Q Consensus       117 ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R  193 (353)
                      +|.....  ..+..+++..|+.....+++.+.+......+|++|.. +.....  ...+......++...+|.+.....+
T Consensus        83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~--~~~~~E~~~~~~~~~Y~~sK~~~e~  160 (336)
T 2hun_A           83 AAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDIL--KGSFTENDRLMPSSPYSATKAASDM  160 (336)
T ss_dssp             CCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCS--SSCBCTTBCCCCCSHHHHHHHHHHH
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCC--CCCcCCCCCCCCCCccHHHHHHHHH
Confidence            9864210  1133456788999999999999988544455555421 100000  0000011123344456666655666


Q ss_pred             HHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          194 ANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      +-..+++.+|++..-++ +.++|..
T Consensus       161 ~~~~~~~~~~~~~~ilrp~~v~g~~  185 (336)
T 2hun_A          161 LVLGWTRTYNLNASITRCTNNYGPY  185 (336)
T ss_dssp             HHHHHHHHTTCEEEEEEECEEESTT
T ss_pred             HHHHHHHHhCCCEEEEeeeeeeCcC
Confidence            66667777776554443 4566754

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=98.21  E-value=2.6e-06  Score=80.04  Aligned_cols=110  Identities=20%  Similarity=0.186  Sum_probs=70.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi  115 (353)
                      .+|||.|+||+|++|++++..|+..|.  +|+++|++....  .++.+.    .+..+..    ..++.++++++|+||+
T Consensus        12 ~~M~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~--~~l~~~----~~~~~~~Dl~d~~~~~~~~~~~d~vih   83 (342)
T 2x4g_A           12 AHVKYAVLGATGLLGHHAARAIRAAGH--DLVLIHRPSSQI--QRLAYL----EPECRVAEMLDHAGLERALRGLDGVIF   83 (342)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECTTSCG--GGGGGG----CCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEecChHhh--hhhccC----CeEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            347999999999999999999999887  999999876211  112211    1121111    1235577899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +++.......+..+++..|+.....+++.+.+....- +|.+|
T Consensus        84 ~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~-~v~~S  125 (342)
T 2x4g_A           84 SAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPR-ILYVG  125 (342)
T ss_dssp             C------------CHHHHHHHHHHHHHHHHHHHTCSC-EEEEC
T ss_pred             CCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCe-EEEEC
Confidence            9885432223445677899999999999999875433 44443

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=98.21  E-value=9e-06  Score=78.17  Aligned_cols=102  Identities=15%  Similarity=0.210  Sum_probs=71.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--------CCCeEEEEeCCCchhhhhCCCc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------TGAVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--------~~~~v~~~~~t~d~~~al~~AD  111 (353)
                      .+|||+|||+ |.+|..++..|+..|+  +|.++|+++.....+.-.+..        ....+..   ++|+++++++||
T Consensus        28 ~~mkI~VIGa-G~mG~alA~~La~~G~--~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~---t~d~~ea~~~aD  101 (356)
T 3k96_A           28 FKHPIAILGA-GSWGTALALVLARKGQ--KVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKA---YCDLKASLEGVT  101 (356)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHTTTC--CEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEE---ESCHHHHHTTCC
T ss_pred             cCCeEEEECc-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEE---ECCHHHHHhcCC
Confidence            3579999999 9999999999999987  899999975221111111110        1123444   357888999999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc
Q 018618          112 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  163 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  163 (353)
                      +||++.  |              ...++++++.+..+. |+.+++.++|..+.
T Consensus       102 vVilaV--p--------------~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~  138 (356)
T 3k96_A          102 DILIVV--P--------------SFAFHEVITRMKPLIDAKTRIAWGTKGLAK  138 (356)
T ss_dssp             EEEECC--C--------------HHHHHHHHHHHGGGCCTTCEEEECCCSCBT
T ss_pred             EEEECC--C--------------HHHHHHHHHHHHHhcCCCCEEEEEeCCCCc
Confidence            999984  2              124677888888776 57888888886554

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=98.20  E-value=8.3e-06  Score=80.45  Aligned_cols=107  Identities=21%  Similarity=0.279  Sum_probs=69.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--C--------------CCeEEEEeCCCchhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQLEN  105 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--~--------------~~~v~~~~~t~d~~~  105 (353)
                      |||+|||+ |.||..++..|++.|+  +|+++|+++.+  +..+....  .              ...+..   ++|+++
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~--~V~~~d~~~~~--~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~---t~~~~~   72 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGH--EVIGVDVSSTK--IDLINQGKSPIVEPGLEALLQQGRQTGRLSG---TTDFKK   72 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ESCHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHhCCCCCcCCCCHHHHHHhhcccCceEE---eCCHHH
Confidence            69999998 9999999999999988  99999997622  11222210  0              112443   357777


Q ss_pred             hhCCCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhC-C---CcEEEEe-cCCCCc
Q 018618          106 ALTGMDLVIIPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCC-P---NATVNLI-SNPVNS  163 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~~-p---~a~viv~-tNPv~~  163 (353)
                      ++++||+||++.+.|... |..       ++..+.++++.+..+. +   +.+|+.. |+|.+.
T Consensus        73 ~~~~aDvviiaVptp~~~~~~~-------dl~~v~~v~~~i~~~l~~~~~~~iVV~~Stv~~g~  129 (436)
T 1mv8_A           73 AVLDSDVSFICVGTPSKKNGDL-------DLGYIETVCREIGFAIREKSERHTVVVRSTVLPGT  129 (436)
T ss_dssp             HHHTCSEEEECCCCCBCTTSSB-------CCHHHHHHHHHHHHHHTTCCSCCEEEECSCCCTTH
T ss_pred             HhccCCEEEEEcCCCcccCCCc-------chHHHHHHHHHHHHHhcccCCCcEEEEeCCcCCCc
Confidence            899999999998766432 221       1222334444444432 4   6666654 688776

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=98.19  E-value=1.6e-05  Score=74.34  Aligned_cols=116  Identities=13%  Similarity=0.001  Sum_probs=77.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH--HHHHHhcCCCCCeEEEE-e----CCCchhhhhCCCcE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG--VTADISHMDTGAVVRGF-L----GQPQLENALTGMDL  112 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~--~~~dl~~~~~~~~v~~~-~----~t~d~~~al~~ADi  112 (353)
                      +.++|.|+||+|++|++++..|++.|.  +|+++|++....  ....+.... ...+..+ .    ...++.++++++|+
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGY--KVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCE
Confidence            356999999999999999999999887  999999865211  111111100 0122222 1    12345567789999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          113 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ||++|+.... +.+..+.+..|+.....+++.+.+......+|++|.
T Consensus        87 vih~A~~~~~-~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS  132 (342)
T 1y1p_A           87 VAHIASVVSF-SNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS  132 (342)
T ss_dssp             EEECCCCCSC-CSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred             EEEeCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence            9999986532 245667788999999999999875333345555543

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=98.18  E-value=7.7e-06  Score=76.85  Aligned_cols=172  Identities=15%  Similarity=0.049  Sum_probs=99.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC----CCchhhhhC--CCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG----QPQLENALT--GMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~--~ADi  112 (353)
                      .|+|.|+||+|++|++++..|++.|.  +|+++|++.  ......++.... ...+..+..    ..+++++++  +.|+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGY--DVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDAHPITA   81 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCC--cEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhccCCcE
Confidence            46999999999999999999999998  999999865  222222222110 011222111    123445566  8999


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhh
Q 018618          113 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD  190 (353)
Q Consensus       113 VIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld  190 (353)
                      ||++|+.....  .....+.+..|+.....+++.+++.....+|.+.|.-+.....  ...+......++...+|.+...
T Consensus        82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~--~~~~~e~~~~~~~~~Y~~sK~~  159 (341)
T 3enk_A           82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPE--RSPIDETFPLSATNPYGQTKLM  159 (341)
T ss_dssp             EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCS--SSSBCTTSCCBCSSHHHHHHHH
T ss_pred             EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCC--CCCCCCCCCCCCCChhHHHHHH
Confidence            99998864211  1123466788999999999999887654444443311110000  0000011122333456666655


Q ss_pred             HHHHHHHHHHHhC-CCCCCCc-ceEEeec
Q 018618          191 VVRANTFVAEVLG-LDPRDVD-VPVVGGH  217 (353)
Q Consensus       191 ~~R~~~~lA~~l~-v~~~~v~-~~viG~h  217 (353)
                      ..++-..+++.++ ++..-++ +.++|.+
T Consensus       160 ~e~~~~~~~~~~~~~~~~~lRp~~v~G~~  188 (341)
T 3enk_A          160 AEQILRDVEAADPSWRVATLRYFNPVGAH  188 (341)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEEECEEECCC
T ss_pred             HHHHHHHHhhcCCCceEEEEeeccccCCc
Confidence            6666666777665 4433333 4577764

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=98.17  E-value=6.5e-06  Score=77.33  Aligned_cols=171  Identities=16%  Similarity=0.168  Sum_probs=97.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC---C---CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----CchhhhhCCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN---P---LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~---~---~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~AD  111 (353)
                      |||.|+||+|++|++++..|+..   |   .  +|+++|+....+....+........+..+...    .++.+++.++|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   78 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPAD--EVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVD   78 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCS--EEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCC
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCce--EEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCC
Confidence            68999999999999999999885   5   4  99999975410000111111111233332211    23456678999


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeech
Q 018618          112 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTM  188 (353)
Q Consensus       112 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~  188 (353)
                      +||++++.....  ..+..+++..|+.....+++.+.+.... .+|++|.. +.....  ...+......++...+|.+.
T Consensus        79 ~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~-~~v~~SS~~vyg~~~--~~~~~E~~~~~~~~~Y~~sK  155 (337)
T 1r6d_A           79 AIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG-RVVHVSTNQVYGSID--SGSWTESSPLEPNSPYAASK  155 (337)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEEEGGGGCCCS--SSCBCTTSCCCCCSHHHHHH
T ss_pred             EEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEecchHHhCCCC--CCCCCCCCCCCCCCchHHHH
Confidence            999998754210  0123456788999999999999887543 44444321 100000  00000111233344566665


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          189 LDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ....++-..+++..|++..-++ +.++|..
T Consensus       156 ~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~  185 (337)
T 1r6d_A          156 AGSDLVARAYHRTYGLDVRITRCCNNYGPY  185 (337)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECEEECTT
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEeeeeECCC
Confidence            5555666666777787655554 4577754

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=98.17  E-value=2.2e-05  Score=73.74  Aligned_cols=118  Identities=13%  Similarity=0.049  Sum_probs=75.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCC-CCeEEEEe----CCCchhhhhCCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDT-GAVVRGFL----GQPQLENALTGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~-~~~v~~~~----~t~d~~~al~~ADiV  113 (353)
                      +.++|.|+||+|++|++++..|++.|+  +|+.++++.. .....++..... ...+..+.    ...+++++++++|+|
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   81 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGY--TVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGV   81 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCC--EEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEE
Confidence            346899999999999999999999987  8887776652 112222222110 01233221    123456788999999


Q ss_pred             EEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          114 IIPAGVPRKPGMTR-DDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       114 Ii~ag~~~~~g~~r-~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      |++|+.......+. .+++..|+.....+++.+.+...-..+|++|.
T Consensus        82 ih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS  128 (337)
T 2c29_D           82 FHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSS  128 (337)
T ss_dssp             EECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeee
Confidence            99987542112222 34678899999999999988763335555543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=98.17  E-value=6.1e-06  Score=76.78  Aligned_cols=165  Identities=15%  Similarity=0.134  Sum_probs=96.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe---CCCchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL---GQPQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~---~t~d~~~al~~ADiVIi~  116 (353)
                      ++||.|+||+|++|++++..|+..|   .++.++... ....   ...    ..+..+.   ...++.++++++|+||.+
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g---~~v~~~~~~~~~~~---~~~----~~~~~~~~Dl~~~~~~~~~~~~d~vih~   70 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN---EIVVIDNLSSGNEE---FVN----EAARLVKADLAADDIKDYLKGAEEVWHI   70 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS---CEEEECCCSSCCGG---GSC----TTEEEECCCTTTSCCHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC---CEEEEEcCCCCChh---hcC----CCcEEEECcCChHHHHHHhcCCCEEEEC
Confidence            3589999999999999999999888   334444433 1100   001    1122111   013566788999999999


Q ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechhhHHH
Q 018618          117 AGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR  193 (353)
Q Consensus       117 ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R  193 (353)
                      ++.+..  ......+.+..|+.....+++.+.+.... .+|++|.- +.....  ..........++...+|.+.....+
T Consensus        71 a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS~~vyg~~~--~~~~~E~~~~~~~~~Y~~sK~~~e~  147 (313)
T 3ehe_A           71 AANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVS-RIVFTSTSTVYGEAK--VIPTPEDYPTHPISLYGASKLACEA  147 (313)
T ss_dssp             CCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGGCSCS--SSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred             CCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeCchHHhCcCC--CCCCCCCCCCCCCCHHHHHHHHHHH
Confidence            886432  22356677889999999999999887644 44444431 100000  0000011123334456666666666


Q ss_pred             HHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          194 ANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      +-..+++.+|++..-++ +.++|...
T Consensus       148 ~~~~~~~~~g~~~~ilRp~~v~G~~~  173 (313)
T 3ehe_A          148 LIESYCHTFDMQAWIYRFANVIGRRS  173 (313)
T ss_dssp             HHHHHHHHTTCEEEEEECSCEESTTC
T ss_pred             HHHHHHHhcCCCEEEEeeccccCcCC
Confidence            77777788887655553 56777543

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=98.16  E-value=1e-05  Score=76.09  Aligned_cols=114  Identities=13%  Similarity=0.102  Sum_probs=71.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cH--HHHHHHhcCCCCCeEEEEe----CCCchhhhhCCCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TP--GVTADISHMDTGAVVRGFL----GQPQLENALTGMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~--~~~~dl~~~~~~~~v~~~~----~t~d~~~al~~ADi  112 (353)
                      .+||.|+||+|++|++++..|++.|+  +|+.++++.  ..  ....++..   ...+..+.    ...++.++++++|+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~--~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~   83 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGY--AVNTTVRDPDNQKKVSHLLELQE---LGDLKIFRADLTDELSFEAPIAGCDF   83 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTC--EEEEEESCTTCTTTTHHHHHHGG---GSCEEEEECCTTTSSSSHHHHTTCSE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCC--EEEEEEcCcchhhhHHHHHhcCC---CCcEEEEecCCCChHHHHHHHcCCCE
Confidence            35899999999999999999999988  888776654  11  11122321   11232221    12356678899999


Q ss_pred             EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          113 VIIPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ||++|+.......+ ..+++..|+.....+++.+.+...-..+|++|.
T Consensus        84 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS  131 (338)
T 2rh8_A           84 VFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSS  131 (338)
T ss_dssp             EEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECC
T ss_pred             EEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEec
Confidence            99998754211111 123678899999999999887642235555543

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=98.16  E-value=1.2e-05  Score=75.34  Aligned_cols=161  Identities=14%  Similarity=-0.002  Sum_probs=93.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----CchhhhhCC--CcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTG--MDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~--ADiVI  114 (353)
                      .++|.|+||+|++|++++..|++.|.  +|+++|++........+........+..+...    .++.+++++  .|+||
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY--EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            46899999999999999999999887  99999987621110112211111223332111    223455665  59999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechhhH
Q 018618          115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  191 (353)
Q Consensus       115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~  191 (353)
                      ++||.....  ..+....+..|+.....+++.+.+......+|++|.. +.-...  ...+......++...+|.+....
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~--~~~~~e~~~~~~~~~Y~~sK~~~  158 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQ--EIPQTEKTPFYPRSPYAVAKLFG  158 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCS--SSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCC--CCCCCccCCCCCCChhHHHHHHH
Confidence            999864211  2345567788999999999999877543455555421 100000  00000111233444566665555


Q ss_pred             HHHHHHHHHHhCCC
Q 018618          192 VRANTFVAEVLGLD  205 (353)
Q Consensus       192 ~R~~~~lA~~l~v~  205 (353)
                      .++-..+++.++++
T Consensus       159 e~~~~~~~~~~~~~  172 (345)
T 2z1m_A          159 HWITVNYREAYNMF  172 (345)
T ss_dssp             HHHHHHHHHHHCCC
T ss_pred             HHHHHHHHHHhCCc
Confidence            66666677777764

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=98.16  E-value=1.2e-05  Score=75.19  Aligned_cols=101  Identities=15%  Similarity=0.164  Sum_probs=66.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHH------H-H-hcCCCC-------------CeEEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTA------D-I-SHMDTG-------------AVVRGF   97 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~------d-l-~~~~~~-------------~~v~~~   97 (353)
                      .+||+|||+ |.+|+.+|..|+..|+  +|+++|+++  +.....      + + ......             ..++. 
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~--~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~~-   90 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGH--TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT-   90 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceEE-
Confidence            468999999 9999999999999998  999999986  111100      0 1 111000             12443 


Q ss_pred             eCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc
Q 018618           98 LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  163 (353)
Q Consensus        98 ~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  163 (353)
                        ++|+++++++||+||++..              .+..+.+++.+.+..++ |+++|  +||...+
T Consensus        91 --~~~~~~~~~~aD~Vi~avp--------------~~~~~~~~v~~~l~~~~~~~~iv--~s~ts~i  139 (302)
T 1f0y_A           91 --STDAASVVHSTDLVVEAIV--------------ENLKVKNELFKRLDKFAAEHTIF--ASNTSSL  139 (302)
T ss_dssp             --ESCHHHHTTSCSEEEECCC--------------SCHHHHHHHHHHHTTTSCTTCEE--EECCSSS
T ss_pred             --ecCHHHhhcCCCEEEEcCc--------------CcHHHHHHHHHHHHhhCCCCeEE--EECCCCC
Confidence              3577778999999999852              22344567777787777 46654  4555443

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=98.16  E-value=1e-05  Score=73.97  Aligned_cols=151  Identities=17%  Similarity=0.132  Sum_probs=94.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi~a  117 (353)
                      ++|.|+||+|++|++++..|+..|.  +|++.|+++....         ...+..+..    ..++.+++++.|+||+.+
T Consensus         4 k~vlVTGasg~IG~~la~~L~~~G~--~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~A   72 (267)
T 3rft_A            4 KRLLVTGAAGQLGRVMRERLAPMAE--ILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVAGCDGIVHLG   72 (267)
T ss_dssp             EEEEEESTTSHHHHHHHHHTGGGEE--EEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCC--EEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECC
Confidence            4799999999999999999999887  8999998762111         112222111    124557789999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHH
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTF  197 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~  197 (353)
                      |...  .....+.+..|+.....+++.+.+.....+|.+.|.-+.....- ...+......++...+|.+......+-+.
T Consensus        73 g~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~-~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~  149 (267)
T 3rft_A           73 GISV--EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQ-TERLGPDVPARPDGLYGVSKCFGENLARM  149 (267)
T ss_dssp             SCCS--CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBT-TSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             CCcC--cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCC-CCCCCCCCCCCCCChHHHHHHHHHHHHHH
Confidence            8742  23456778899999999999998776444444433322100000 00000112234445566666666667777


Q ss_pred             HHHHhCCCC
Q 018618          198 VAEVLGLDP  206 (353)
Q Consensus       198 lA~~l~v~~  206 (353)
                      +++.+|++.
T Consensus       150 ~a~~~g~~~  158 (267)
T 3rft_A          150 YFDKFGQET  158 (267)
T ss_dssp             HHHHHCCCE
T ss_pred             HHHHhCCeE
Confidence            888887653

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=98.15  E-value=1.7e-05  Score=75.12  Aligned_cols=173  Identities=14%  Similarity=0.041  Sum_probs=100.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCC---CCeEEEEeCC----CchhhhhCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDT---GAVVRGFLGQ----PQLENALTGMD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~---~~~v~~~~~t----~d~~~al~~AD  111 (353)
                      +|||.|+||+|++|++++..|+..|.  +|+++|++..  .....++.....   ...+..+...    .++.++++++|
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           27 PKVWLITGVAGFIGSNLLETLLKLDQ--KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            46999999999999999999999887  9999998651  111122211000   0123322111    23456789999


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeech
Q 018618          112 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTM  188 (353)
Q Consensus       112 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~  188 (353)
                      +||.+++.....  ..+....+..|+.....+++.+.+.... .+|++|.. +..-..  ...+....-..+...+|.+.
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~SS~~~~~~~~--~~~~~E~~~~~~~~~Y~~sK  181 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQ-SFTYAASSSTYGDHP--GLPKVEDTIGKPLSPYAVTK  181 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEGGGGTTCC--CSSBCTTCCCCCCSHHHHHH
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeccHHhcCCCC--CCCCCCCCCCCCCChhHHHH
Confidence            999998854211  0234456788999999999999876544 34444321 100000  00000001112334556665


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          189 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      ....++-..+++..|++..-++ +.++|...
T Consensus       182 ~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~  212 (352)
T 1sb8_A          182 YVNELYADVFSRCYGFSTIGLRYFNVFGRRQ  212 (352)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEEECCEECTTC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEEECceeCcCC
Confidence            5556666667777787766554 56788543

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=98.15  E-value=5.9e-06  Score=80.71  Aligned_cols=112  Identities=18%  Similarity=0.277  Sum_probs=71.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC--------------CCeEEEEeCCCchhhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--------------GAVVRGFLGQPQLENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~--------------~~~v~~~~~t~d~~~al  107 (353)
                      |||+|||+ |.||..++..|++ |+  +|+++|+++.+  +..+.....              ...+..   ++++++++
T Consensus         1 MkI~VIG~-G~vG~~~A~~La~-G~--~V~~~d~~~~~--~~~l~~~~~~i~e~~l~~~~~~~~~~l~~---t~~~~~~~   71 (402)
T 1dlj_A            1 MKIAVAGS-GYVGLSLGVLLSL-QN--EVTIVDILPSK--VDKINNGLSPIQDEYIEYYLKSKQLSIKA---TLDSKAAY   71 (402)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TS--EEEEECSCHHH--HHHHHTTCCSSCCHHHHHHHHHSCCCEEE---ESCHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHhC-CC--EEEEEECCHHH--HHHHHcCCCCcCCCCHHHHHHhccCcEEE---eCCHHHHh
Confidence            69999999 9999999999998 76  99999997522  122222110              012333   35667889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE-ecCCCCchhHH
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPI  167 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~~  167 (353)
                      ++||+||++...+...+..+.|     +..+.++++.+....|+.+|+. .|||.+....+
T Consensus        72 ~~aDvviiavpt~~~~~~~~~d-----l~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l  127 (402)
T 1dlj_A           72 KEAELVIIATPTNYNSRINYFD-----TQHVETVIKEVLSVNSHATLIIKSTIPIGFITEM  127 (402)
T ss_dssp             HHCSEEEECCCCCEETTTTEEC-----CHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHH
T ss_pred             cCCCEEEEecCCCcccCCCCcc-----HHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHH
Confidence            9999999997655322222222     1223444444544457777766 68999876544

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=98.14  E-value=4.9e-06  Score=83.20  Aligned_cols=119  Identities=18%  Similarity=0.194  Sum_probs=74.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC---------------CCeEEEEeCCCchhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT---------------GAVVRGFLGQPQLEN  105 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~---------------~~~v~~~~~t~d~~~  105 (353)
                      +|||+|||+ |.||..+|..|+..+...+|+++|+++.+  +..+.....               ...++.   ++|+++
T Consensus         9 ~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~~D~~~~~--v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~---t~~~~~   82 (481)
T 2o3j_A            9 VSKVVCVGA-GYVGGPTCAMIAHKCPHITVTVVDMNTAK--IAEWNSDKLPIYEPGLDEIVFAARGRNLFF---SSDIPK   82 (481)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHH--HHHHTSSSCSSCCTTHHHHHHHHBTTTEEE---ESCHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHH--HHHHHCCCCCcCCCCHHHHHHHhhcCCEEE---ECCHHH
Confidence            579999999 99999999999987432399999997622  222322110               012443   357778


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhH
Q 018618          106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVP  166 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~  166 (353)
                      ++++||+||++.+.|...+.++.+ -..++..+.+.++.|.++. |+.+|+.. |+|.+..-.
T Consensus        83 ~~~~aDvvii~Vptp~~~~g~~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~gt~~~  144 (481)
T 2o3j_A           83 AIAEADLIFISVNTPTKMYGRGKG-MAPDLKYVESVSRTIAQYAGGPKIVVEKSTVPVKAAES  144 (481)
T ss_dssp             HHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTHHHH
T ss_pred             HhhcCCEEEEecCCcccccccccc-CCCcHHHHHHHHHHHHHhCCCCCEEEECCCCCCCHHHH
Confidence            899999999998777543222111 0122334556667777666 45555543 688776543

>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}

Probab=98.14  E-value=4.2e-06  Score=81.30  Aligned_cols=131  Identities=18%  Similarity=0.326  Sum_probs=68.4

Q ss_pred             hhhhhhHHHHHhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCC------CcEEEEEeCCC-
Q 018618            5 SEANQRIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPL------VSVLHLYDVVN-   77 (353)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~------~~el~L~D~~~-   77 (353)
                      |.+++|+.+.+.|+-++.-+-.    ..+...-..+|.||+|+|| |.-|+++|..|..++.      ..+|.|...++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e   76 (391)
T 4fgw_A            2 SAAADRLNLTSGHLNAGRKRSS----SSVSLKAAEKPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEE   76 (391)
T ss_dssp             -----------------------------------CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCB
T ss_pred             cchhhHHHHHhhhhcccccccc----ccccccccCCCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcchH
Confidence            5578899999999988765432    1222222355779999999 9999999999987642      13688887665 


Q ss_pred             c--HHHHHHHh--cCC--------CCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 018618           78 T--PGVTADIS--HMD--------TGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI  145 (353)
Q Consensus        78 ~--~~~~~dl~--~~~--------~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i  145 (353)
                      .  +..+..+.  |..        .+..+..   ++|+++++++||+||+..  |              .+.++++++++
T Consensus        77 ~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~---t~dl~~al~~ad~ii~av--P--------------s~~~r~~l~~l  137 (391)
T 4fgw_A           77 INGEKLTEIINTRHQNVKYLPGITLPDNLVA---NPDLIDSVKDVDIIVFNI--P--------------HQFLPRICSQL  137 (391)
T ss_dssp             SSSCBHHHHHTTTCCBTTTBTTCCCCSSEEE---ESCHHHHHTTCSEEEECS--C--------------GGGHHHHHHHH
T ss_pred             hhhHHHHHHHHhcCcCcccCCCCcCCCCcEE---eCCHHHHHhcCCEEEEEC--C--------------hhhhHHHHHHh
Confidence            1  21222232  321        1234554   468999999999999974  2              23377888888


Q ss_pred             HhhC-CCcEEEEecC
Q 018618          146 AKCC-PNATVNLISN  159 (353)
Q Consensus       146 ~~~~-p~a~viv~tN  159 (353)
                      ..+- ++..+|.++-
T Consensus       138 ~~~~~~~~~iv~~~K  152 (391)
T 4fgw_A          138 KGHVDSHVRAISCLK  152 (391)
T ss_dssp             TTTSCTTCEEEECCC
T ss_pred             ccccCCCceeEEecc
Confidence            8776 4666766653

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=98.14  E-value=1.2e-05  Score=79.45  Aligned_cols=120  Identities=18%  Similarity=0.179  Sum_probs=79.3

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC----------------CCCeEEEEeCCC
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQP  101 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~----------------~~~~v~~~~~t~  101 (353)
                      +..+.+|+|||. |+||..+|..|+..|+  +|+.+|+++.+  +..|+...                ...+++.   ++
T Consensus        18 ~~~m~~IaViGl-GYVGLp~A~~~A~~G~--~V~g~Did~~k--V~~ln~G~~pi~Epgl~ell~~~~~~g~l~~---tt   89 (444)
T 3vtf_A           18 GSHMASLSVLGL-GYVGVVHAVGFALLGH--RVVGYDVNPSI--VERLRAGRPHIYEPGLEEALGRALSSGRLSF---AE   89 (444)
T ss_dssp             TCCCCEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSCHHH--HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---CS
T ss_pred             CCCCCEEEEEcc-CHHHHHHHHHHHhCCC--cEEEEECCHHH--HHHHHCCCCCCCCCCHHHHHHHHHHcCCeeE---Ec
Confidence            345569999999 9999999999999998  99999998621  12222211                0134554   46


Q ss_pred             chhhhhCCCcEEEEcCCCCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE-ecCCCCchhHHH
Q 018618          102 QLENALTGMDLVIIPAGVPRKPGM-TRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPIA  168 (353)
Q Consensus       102 d~~~al~~ADiVIi~ag~~~~~g~-~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~~~  168 (353)
                      |.++++++||++|++.+.|..... ..+.++   ....+.+++.++..++..+|++ .|-|+...-.++
T Consensus        90 ~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v---~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~  155 (444)
T 3vtf_A           90 SAEEAVAATDATFIAVGTPPAPDGSADLRYV---EAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLV  155 (444)
T ss_dssp             SHHHHHHTSSEEEECCCCCBCTTSSBCCHHH---HHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHH
T ss_pred             CHHHHHhcCCceEEEecCCCCCCCCCCcHHH---HHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHH
Confidence            778999999999999988865432 222222   2345666666765555555544 467877654433

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=98.14  E-value=1.2e-05  Score=84.34  Aligned_cols=116  Identities=21%  Similarity=0.316  Sum_probs=76.2

Q ss_pred             hhhhhhhhcccCC--------CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHHH--HH-HhcC---
Q 018618           26 SCLRQAKCRAKGG--------AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGVT--AD-ISHM---   88 (353)
Q Consensus        26 ~~~~~~~~~~~~~--------~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~~--~d-l~~~---   88 (353)
                      .||.++..++..+        .+.+||+|||+ |.+|+.+|..++..|+  +|+++|+++  + .+..  .+ +...   
T Consensus       289 aF~~kr~~~~~~~~~~~~~~~~~~~kV~VIGa-G~MG~~iA~~la~aG~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~  365 (725)
T 2wtb_A          289 VFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGG-GLMGSGIATALILSNY--PVILKEVNEKFLEAGIGRVKANLQSRVRK  365 (725)
T ss_dssp             HHHHHHGGGCCTTTSSSCCCCCCCCCEEEECC-SHHHHHHHHHHHTTTC--CEEEECSSHHHHHHHHHHHHHHHHHTTC-
T ss_pred             HhhhhhhhcccCCCCccccccccCcEEEEEcC-CHhhHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhc
Confidence            4565555555432        12468999999 9999999999999998  999999986  1 1110  11 1100   


Q ss_pred             C---------CCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEec
Q 018618           89 D---------TGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLIS  158 (353)
Q Consensus        89 ~---------~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~t  158 (353)
                      .         ....++.   ++|+ +++++||+||++.              .++..+.+++...+.++++ ++++  +|
T Consensus       366 G~~~~~~~~~~~~~i~~---~~d~-~~~~~aDlVIeaV--------------pe~~~vk~~v~~~l~~~~~~~~Il--as  425 (725)
T 2wtb_A          366 GSMSQEKFEKTMSLLKG---SLDY-ESFRDVDMVIEAV--------------IENISLKQQIFADLEKYCPQHCIL--AS  425 (725)
T ss_dssp             ---CTTHHHHTTTSEEE---ESSS-GGGTTCSEEEECC--------------CSCHHHHHHHHHHHHHHSCTTCEE--EE
T ss_pred             CCCCHHHHHHHhcceEE---eCCH-HHHCCCCEEEEcC--------------cCCHHHHHHHHHHHHhhCCCCcEE--Ee
Confidence            0         1123554   2566 6899999999985              2345567778888888885 5643  67


Q ss_pred             CCCCch
Q 018618          159 NPVNST  164 (353)
Q Consensus       159 NPv~~~  164 (353)
                      |...+-
T Consensus       426 ntStl~  431 (725)
T 2wtb_A          426 NTSTID  431 (725)
T ss_dssp             CCSSSC
T ss_pred             CCCCCC
Confidence            776543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=98.13  E-value=6.4e-06  Score=72.89  Aligned_cols=104  Identities=15%  Similarity=0.140  Sum_probs=71.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi~  116 (353)
                      +|||.|+||+|++|++++..|+..|.  +|++++++...     +...  ...+..+..    ..+++++++++|+||.+
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~-----~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~   74 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGF--EVTAVVRHPEK-----IKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISA   74 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTC--EEEEECSCGGG-----CCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEEcCccc-----chhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEe
Confidence            57999999999999999999999987  99999987521     1111  122333211    13456788999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +|...    +..++...|+.....+++.+.+....- +|.+|
T Consensus        75 a~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~-~v~~S  111 (227)
T 3dhn_A           75 FNPGW----NNPDIYDETIKVYLTIIDGVKKAGVNR-FLMVG  111 (227)
T ss_dssp             CCC----------CCSHHHHHHHHHHHHHHHTTCSE-EEEEC
T ss_pred             CcCCC----CChhHHHHHHHHHHHHHHHHHHhCCCE-EEEeC
Confidence            87542    112245678999999999998876443 44444

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=98.13  E-value=6.3e-06  Score=78.08  Aligned_cols=175  Identities=17%  Similarity=0.105  Sum_probs=99.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-C---chhhhhC--CCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-P---QLENALT--GMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~---d~~~al~--~ADiVI  114 (353)
                      |||.|+||+|++|++++..|+.. +.  +|+++|++...+....+.+......+..+... +   ++.++++  ++|+||
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   78 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQD--TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVM   78 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC--EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCC--eEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            68999999999999999998886 56  89999975410000111111111233332211 2   3345566  899999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhh--CCC------cEEEEecCC-CCchhHHHHH--------HHHHh
Q 018618          115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKC--CPN------ATVNLISNP-VNSTVPIAAE--------VFKKA  175 (353)
Q Consensus       115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~--~p~------a~viv~tNP-v~~~t~~~~~--------~~~~~  175 (353)
                      ++++.....  ..+..+++..|+.....+++.+.+.  ...      +.+|++|.. +.....--..        .+...
T Consensus        79 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~  158 (361)
T 1kew_A           79 HLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTET  158 (361)
T ss_dssp             ECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTT
T ss_pred             ECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCC
Confidence            999864210  1123456788999999999999877  433      355555431 1000000000        00011


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      ...++...+|.+.....++-..+++.+|++..-++ +.|+|...
T Consensus       159 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          159 TAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCC
Confidence            12334445666666666666677777787655554 55677543

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=98.13  E-value=1.4e-05  Score=79.72  Aligned_cols=118  Identities=14%  Similarity=0.115  Sum_probs=75.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCc--HHHHHHHhcCC--C----------------CCeEEEEe
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT--PGVTADISHMD--T----------------GAVVRGFL   98 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~--~~~~~dl~~~~--~----------------~~~v~~~~   98 (353)
                      +.|||+|||+ |.+|..+|..|+.. |+. +|+++|+++.  .+.+..+....  .                ...+..  
T Consensus        17 ~~mkIaVIGl-G~mG~~lA~~la~~~G~~-~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~--   92 (478)
T 3g79_A           17 PIKKIGVLGM-GYVGIPAAVLFADAPCFE-KVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC--   92 (478)
T ss_dssp             SCCEEEEECC-STTHHHHHHHHHHSTTCC-EEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE--
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCC-eEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE--
Confidence            4579999999 99999999999999 764 8999999873  22444444321  1                123443  


Q ss_pred             CCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCchhHH
Q 018618           99 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNSTVPI  167 (353)
Q Consensus        99 ~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~t~~  167 (353)
                       ++| .+++++||+||++.+.|.....++    ..++..+...++.|.++. |+.+|+.- |-|.+..-.+
T Consensus        93 -ttd-~ea~~~aDvViiaVptp~~~~~~~----~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v  157 (478)
T 3g79_A           93 -TPD-FSRISELDAVTLAIQTPFANPKDL----EPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGM  157 (478)
T ss_dssp             -ESC-GGGGGGCSEEEECCCCCCCSSCCS----SCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTH
T ss_pred             -eCc-HHHHhcCCEEEEecCCchhccCCc----cccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHH
Confidence             356 578999999999987775433210    012333555556666655 55555544 4555544333

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=98.12  E-value=1.5e-05  Score=69.88  Aligned_cols=100  Identities=12%  Similarity=0.110  Sum_probs=68.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC---CCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG---QPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~---t~d~~~al~~ADiVIi~ag  118 (353)
                      |||.|+||+|++|++++..|+..|.  +|++++++.....  ++.  .   .+..+..   ..+. +++.++|+||.++|
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~--~~~--~---~~~~~~~D~~d~~~-~~~~~~d~vi~~ag   70 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGH--EVTAIVRNAGKIT--QTH--K---DINILQKDIFDLTL-SDLSDQNVVVDAYG   70 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCSHHHH--HHC--S---SSEEEECCGGGCCH-HHHTTCSEEEECCC
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCC--EEEEEEcCchhhh--hcc--C---CCeEEeccccChhh-hhhcCCCEEEECCc
Confidence            7999999999999999999999997  9999998762211  222  1   1122111   1122 68899999999998


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      .+...       ...|+...+.+++.+++... ..++++|.
T Consensus        71 ~~~~~-------~~~~~~~~~~l~~a~~~~~~-~~~v~~SS  103 (221)
T 3ew7_A           71 ISPDE-------AEKHVTSLDHLISVLNGTVS-PRLLVVGG  103 (221)
T ss_dssp             SSTTT-------TTSHHHHHHHHHHHHCSCCS-SEEEEECC
T ss_pred             CCccc-------cchHHHHHHHHHHHHHhcCC-ceEEEEec
Confidence            75321       24578888899998887643 34555543

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=98.12  E-value=7e-06  Score=77.15  Aligned_cols=172  Identities=18%  Similarity=0.146  Sum_probs=100.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCC--Cc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG----QPQLENALTG--MD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~--AD  111 (353)
                      +|||.|+||+|++|++++..|+..|.  +|+++|++.   ......++...   ..+..+..    ..++++++++  +|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~d   75 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGI--DLIVFDNLSRKGATDNLHWLSSL---GNFEFVHGDIRNKNDVTRLITKYMPD   75 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSTTHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCC--EEEEEeCCCccCchhhhhhhccC---CceEEEEcCCCCHHHHHHHHhccCCC
Confidence            36899999999999999999999887  999999743   22222334331   12222211    1234566777  99


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHH--------------HHHHHHH
Q 018618          112 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPI--------------AAEVFKK  174 (353)
Q Consensus       112 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~--------------~~~~~~~  174 (353)
                      +||.+++.....  ..+..+.+..|+.....+++.+.+....+.+|++|.. +..-..-              .......
T Consensus        76 ~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e  155 (347)
T 1orr_A           76 SCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDE  155 (347)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCT
T ss_pred             EEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccc
Confidence            999999854210  1134556788999999999999988765455555432 1000000              0000000


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ....++...+|.+.....++-..+++.+|++..-++ +.++|..
T Consensus       156 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~  199 (347)
T 1orr_A          156 STQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGR  199 (347)
T ss_dssp             TSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             cCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcC
Confidence            011223344555555555666666777777654443 5577753

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=98.11  E-value=1.3e-05  Score=70.64  Aligned_cols=101  Identities=18%  Similarity=0.142  Sum_probs=70.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC---CCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG---QPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~---t~d~~~al~~ADiVIi~ag  118 (353)
                      |||.|+||+|++|++++..|+..|.  +|++++++...  ..++...    .+..+..   ..+. +++.++|+||.++|
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~--~~~~~~~----~~~~~~~D~~d~~~-~~~~~~d~vi~~ag   71 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGH--EVLAVVRDPQK--AADRLGA----TVATLVKEPLVLTE-ADLDSVDAVVDALS   71 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHTCT----TSEEEECCGGGCCH-HHHTTCSEEEECCC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCC--EEEEEEecccc--cccccCC----CceEEecccccccH-hhcccCCEEEECCc
Confidence            7999999999999999999999987  99999987522  1122221    1222111   1122 67899999999998


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ....+..     ...|+...+.+++.+++..  ..++++|
T Consensus        72 ~~~~~~~-----~~~n~~~~~~l~~a~~~~~--~~~v~~S  104 (224)
T 3h2s_A           72 VPWGSGR-----GYLHLDFATHLVSLLRNSD--TLAVFIL  104 (224)
T ss_dssp             CCTTSSC-----THHHHHHHHHHHHTCTTCC--CEEEEEC
T ss_pred             cCCCcch-----hhHHHHHHHHHHHHHHHcC--CcEEEEe
Confidence            7532222     2568888999999988776  5555554

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=98.09  E-value=3.1e-06  Score=79.87  Aligned_cols=169  Identities=16%  Similarity=0.117  Sum_probs=98.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhC--CCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEeCC----CchhhhhCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFLGQ----PQLENALTGMD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~--~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~AD  111 (353)
                      +|+|.|+||+|++|++++..|+..  |.  +|+++|++..   .....++..    ..+..+...    .++.++++++|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dl~d~~~~~~~~~~~d   77 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDV--HVTVLDKLTYAGNKANLEAILG----DRVELVVGDIADAELVDKLAAKAD   77 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTC--EEEEEECCCTTCCGGGTGGGCS----SSEEEEECCTTCHHHHHHHHTTCS
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCC--EEEEEeCCCCCCChhHHhhhcc----CCeEEEECCCCCHHHHHHHhhcCC
Confidence            469999999999999999999887  55  9999998641   111111211    233332211    23456789999


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHH----------HHHHHHHhCCC
Q 018618          112 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPI----------AAEVFKKAGTY  178 (353)
Q Consensus       112 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~----------~~~~~~~~~~~  178 (353)
                      +||++++.....  ..+..+.+..|+.....+++.+.+...  .+|++|.. +.....-          ....+......
T Consensus        78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~--~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~  155 (348)
T 1oc2_A           78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI--RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY  155 (348)
T ss_dssp             EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC--EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred             EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC--eEEEecccceeCCCcccccccccccccCCCcCCCCCC
Confidence            999999854210  012345678899999999999988754  55555421 1000000          00000011123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ++...+|.+.....++-..+++.+|++..-++ +.++|..
T Consensus       156 ~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~  195 (348)
T 1oc2_A          156 NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPY  195 (348)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTT
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCC
Confidence            34445666655555666666777776654443 4567754

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=98.09  E-value=8.5e-06  Score=81.40  Aligned_cols=105  Identities=15%  Similarity=0.158  Sum_probs=70.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--C--------------CCeEEEEeCCCch
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQL  103 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--~--------------~~~v~~~~~t~d~  103 (353)
                      ..|||+|||+ |.||..+|..|++.|+  +|+++|+++.+  +..+....  .              ...++.   ++|+
T Consensus         7 ~~~~I~VIG~-G~vG~~lA~~la~~G~--~V~~~d~~~~~--v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~---ttd~   78 (478)
T 2y0c_A            7 GSMNLTIIGS-GSVGLVTGACLADIGH--DVFCLDVDQAK--IDILNNGGVPIHEPGLKEVIARNRSAGRLRF---STDI   78 (478)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ECCH
T ss_pred             CCceEEEECc-CHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHCCCCCcCCCCHHHHHHHhcccCCEEE---ECCH
Confidence            4689999999 9999999999999998  99999997621  22222211  0              012443   4677


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                      ++++++||+||++...|.+...      .-++..+.++++.|..+. |+.+|++.|
T Consensus        79 ~~a~~~aDvviiaVptp~~~~~------~~dl~~v~~v~~~i~~~l~~~~iVV~~S  128 (478)
T 2y0c_A           79 EAAVAHGDVQFIAVGTPPDEDG------SADLQYVLAAARNIGRYMTGFKVIVDKS  128 (478)
T ss_dssp             HHHHHHCSEEEECCCCCBCTTS------SBCCHHHHHHHHHHHHHCCSCEEEEECS
T ss_pred             HHHhhcCCEEEEEeCCCcccCC------CccHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence            7889999999999877643221      123344556666676665 455555443

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=98.07  E-value=1.8e-05  Score=73.12  Aligned_cols=109  Identities=10%  Similarity=0.098  Sum_probs=74.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC-----CcEEEEc
Q 018618           43 KVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG-----MDLVIIP  116 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~-----ADiVIi~  116 (353)
                      ||.|+||+|++|++++..|+..| .  +|++++.........++........+.   ....+++++++     +|+||++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~~d~vi~~   75 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKFVNLVDLNIADYMD---KEDFLIQIMAGEEFGDVEAIFHE   75 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCC--CEEEEECCSSGGGGHHHHTSCCSEEEE---HHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCc--EEEEEccCCCCchhhhcCcceeccccc---cHHHHHHHHhccccCCCcEEEEC
Confidence            58999999999999999999988 5  889999865211111222221111222   11234556664     9999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ++.......+..+....|+.....+++.+.+...  .+|.+|
T Consensus        76 a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  115 (310)
T 1eq2_A           76 GACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYAS  115 (310)
T ss_dssp             CSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEE
T ss_pred             cccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEe
Confidence            8865433345667788999999999999998765  444444

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=98.05  E-value=1.7e-05  Score=78.15  Aligned_cols=114  Identities=20%  Similarity=0.232  Sum_probs=69.4

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--C------------CCeEEEEeCCCchh
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T------------GAVVRGFLGQPQLE  104 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--~------------~~~v~~~~~t~d~~  104 (353)
                      ...|||+|||+ |.||..+|..|++ |+  +|+++|+++.+  +..+....  .            ...++.   ++|++
T Consensus        34 ~~~mkIaVIGl-G~mG~~lA~~La~-G~--~V~~~D~~~~~--v~~l~~g~~~i~e~~l~~ll~~~~~~l~~---ttd~~  104 (432)
T 3pid_A           34 SEFMKITISGT-GYVGLSNGVLIAQ-NH--EVVALDIVQAK--VDMLNQKISPIVDKEIQEYLAEKPLNFRA---TTDKH  104 (432)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHT-TS--EEEEECSCHHH--HHHHHTTCCSSCCHHHHHHHHHSCCCEEE---ESCHH
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHc-CC--eEEEEecCHHH--hhHHhccCCccccccHHHHHhhccCCeEE---EcCHH
Confidence            35689999999 9999999999987 76  99999997621  11222210  0            113443   46888


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe-cCCCCchhH
Q 018618          105 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI-SNPVNSTVP  166 (353)
Q Consensus       105 ~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~-tNPv~~~t~  166 (353)
                      +++++||+||++...+........     ++..+.+.++.+.+..|+.+|+.- |.|....-.
T Consensus       105 ea~~~aDvViiaVPt~~~~~~~~~-----Dl~~V~~v~~~i~~l~~g~iVV~~STv~pgtt~~  162 (432)
T 3pid_A          105 DAYRNADYVIIATPTDYDPKTNYF-----NTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRD  162 (432)
T ss_dssp             HHHTTCSEEEECCCCEEETTTTEE-----ECHHHHHHHHHHHHHCTTSEEEECSCCCTTHHHH
T ss_pred             HHHhCCCEEEEeCCCccccccccc-----cHHHHHHHHHHHHhcCCCcEEEEeCCCChHHHHH
Confidence            999999999998654422111111     122233444444444577766654 466665433

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=98.05  E-value=6.2e-06  Score=82.48  Aligned_cols=101  Identities=23%  Similarity=0.348  Sum_probs=68.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHH----HhcCCC-C-----------CeEEEEeCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTAD----ISHMDT-G-----------AVVRGFLGQPQ  102 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~d----l~~~~~-~-----------~~v~~~~~t~d  102 (353)
                      .+||+|||+ |.+|..+|..|+..|+  +|+++|+++  +......    +..... .           ..++.   ++|
T Consensus         5 ~~kVgVIGa-G~MG~~IA~~la~aG~--~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~   78 (483)
T 3mog_A            5 VQTVAVIGS-GTMGAGIAEVAASHGH--QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP---VTD   78 (483)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE---ECC
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE---eCC
Confidence            359999999 9999999999999998  999999987  1111111    111110 0           12443   356


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCch
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  164 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~  164 (353)
                      + +++++||+||.+.              ..+..+.+++...+.+++ |++++  +||.+.+-
T Consensus        79 ~-~~~~~aDlVIeAV--------------pe~~~vk~~v~~~l~~~~~~~~Il--asntSti~  124 (483)
T 3mog_A           79 I-HALAAADLVIEAA--------------SERLEVKKALFAQLAEVCPPQTLL--TTNTSSIS  124 (483)
T ss_dssp             G-GGGGGCSEEEECC--------------CCCHHHHHHHHHHHHHHSCTTCEE--EECCSSSC
T ss_pred             H-HHhcCCCEEEEcC--------------CCcHHHHHHHHHHHHHhhccCcEE--EecCCCCC
Confidence            6 5799999999985              234566777888888887 56644  56655543

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=98.04  E-value=1.5e-05  Score=74.62  Aligned_cols=119  Identities=19%  Similarity=0.231  Sum_probs=74.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHH-hcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADI-SHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl-~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .+||+|||+ |.+|+.+|..|+ .|+  +|+++|+++ ....+.+. .+. ....++..   +|++ ++++||+||.+. 
T Consensus        12 ~~~V~vIG~-G~MG~~iA~~la-aG~--~V~v~d~~~~~~~~~~~~l~~~-~~~~i~~~---~~~~-~~~~aDlVieav-   81 (293)
T 1zej_A           12 HMKVFVIGA-GLMGRGIAIAIA-SKH--EVVLQDVSEKALEAAREQIPEE-LLSKIEFT---TTLE-KVKDCDIVMEAV-   81 (293)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHH-TTS--EEEEECSCHHHHHHHHHHSCGG-GGGGEEEE---SSCT-TGGGCSEEEECC-
T ss_pred             CCeEEEEee-CHHHHHHHHHHH-cCC--EEEEEECCHHHHHHHHHHHHHH-HhCCeEEe---CCHH-HHcCCCEEEEcC-
Confidence            469999999 999999999999 998  999999986 21122222 111 01235442   4554 489999999985 


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhh
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD  190 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld  190 (353)
                                   .++..+.+.+...+... |++++  +||.+.+-...+    ..... .+.+++|+..++
T Consensus        82 -------------pe~~~vk~~l~~~l~~~-~~~Il--asntSti~~~~~----a~~~~-~~~r~~G~Hf~~  132 (293)
T 1zej_A           82 -------------FEDLNTKVEVLREVERL-TNAPL--CSNTSVISVDDI----AERLD-SPSRFLGVHWMN  132 (293)
T ss_dssp             -------------CSCHHHHHHHHHHHHTT-CCSCE--EECCSSSCHHHH----HTTSS-CGGGEEEEEECS
T ss_pred             -------------cCCHHHHHHHHHHHhcC-CCCEE--EEECCCcCHHHH----HHHhh-cccceEeEEecC
Confidence                         33455566666678877 88865  455544332111    12222 245777775443

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=98.04  E-value=1.1e-05  Score=76.59  Aligned_cols=171  Identities=14%  Similarity=0.095  Sum_probs=97.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCC-C---chhhhhCC--CcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ-P---QLENALTG--MDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t-~---d~~~al~~--ADi  112 (353)
                      .|+|.|+||+|++|++++..|+..|.  +|+++|++.  .......+..   ...+..+... .   ++.+++++  .|+
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   83 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA--TVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREFQPEI   83 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC--eEEEEeCCCcccchhhHhhcc---CCceEEEEccccCHHHHHHHHHhcCCCE
Confidence            46999999999999999999999887  999999875  2212111211   1122222111 2   33455665  899


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechh
Q 018618          113 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTML  189 (353)
Q Consensus       113 VIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~l  189 (353)
                      ||++++.+...  .....+.+..|+.....+++.+.+......+|++|.. +..-..- ..........++...+|.+..
T Consensus        84 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~-~~~~~E~~~~~~~~~Y~~sK~  162 (357)
T 1rkx_A           84 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW-IWGYRENEAMGGYDPYSNSKG  162 (357)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS-SSCBCTTSCBCCSSHHHHHHH
T ss_pred             EEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCc-CCCCCCCCCCCCCCccHHHHH
Confidence            99999854211  1234466788999999999999887533455555432 1000000 000001111233345565555


Q ss_pred             hHHHHHHHHHHHh---------CCCCCCCc-ceEEeec
Q 018618          190 DVVRANTFVAEVL---------GLDPRDVD-VPVVGGH  217 (353)
Q Consensus       190 d~~R~~~~lA~~l---------~v~~~~v~-~~viG~h  217 (353)
                      ...++-..+++.+         |++..-++ +.++|..
T Consensus       163 ~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~  200 (357)
T 1rkx_A          163 CAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  200 (357)
T ss_dssp             HHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             HHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCC
Confidence            5555655566554         66544443 5677753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=98.04  E-value=7e-06  Score=78.17  Aligned_cols=115  Identities=17%  Similarity=0.101  Sum_probs=75.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHh--CCCCcEEEEEeCCCc-HH-HHHHHhcCC-----CCCeEEEEeC----CCchhhh
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKI--NPLVSVLHLYDVVNT-PG-VTADISHMD-----TGAVVRGFLG----QPQLENA  106 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~--~~~~~el~L~D~~~~-~~-~~~dl~~~~-----~~~~v~~~~~----t~d~~~a  106 (353)
                      .+|+|.|+||+|++|++++..|+.  .|.  +|+++|+... .. .........     ....+..+..    ..+++++
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKA--KVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTS--EEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCC--eEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            357999999999999999999998  777  9999998542 00 000000000     0112222211    1233445


Q ss_pred             -hCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          107 -LTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       107 -l~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                       ..++|+||.+||.......+..+.+..|+.....+++.+++....  +|++|
T Consensus        87 ~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~--~V~~S  137 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK--VIYAS  137 (362)
T ss_dssp             TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE--EEEEE
T ss_pred             hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEeC
Confidence             689999999998654334556778899999999999999877644  44443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.03  E-value=1.9e-05  Score=72.97  Aligned_cols=99  Identities=17%  Similarity=0.193  Sum_probs=68.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||.|+||+|+||++++..|.+.|+  +|+.+.+++..            ..+..  ...+ .++++++|.||.+++..-
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~--~V~~l~R~~~~------------~~~~~--~~~~-~~~l~~~d~vihla~~~i   63 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGH--EVTLVSRKPGP------------GRITW--DELA-ASGLPSCDAAVNLAGENI   63 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCT------------TEEEH--HHHH-HHCCCSCSEEEECCCCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCc------------Ceeec--chhh-HhhccCCCEEEEeccCcc
Confidence            8999999999999999999999998  99988875411            11111  0112 367899999999987532


Q ss_pred             CC-----C-CCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEe
Q 018618          122 KP-----G-MTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLI  157 (353)
Q Consensus       122 ~~-----g-~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~  157 (353)
                      ..     . ....++...|+...+.+++.+.+... ..+++..
T Consensus        64 ~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~  106 (298)
T 4b4o_A           64 LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLV  106 (298)
T ss_dssp             SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEE
T ss_pred             cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence            11     1 12345667889999999998887663 3334433

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.03  E-value=1.2e-05  Score=80.83  Aligned_cols=104  Identities=17%  Similarity=0.104  Sum_probs=71.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      +|||.|+||+|++|++++..|+..|+  +|+.++++....     .      .+..- ......+++.++|+||.+++..
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~--~V~~l~R~~~~~-----~------~v~~d-~~~~~~~~l~~~D~Vih~A~~~  212 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGH--EVIQLVRKEPKP-----G------KRFWD-PLNPASDLLDGADVLVHLAGEP  212 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSSCCT-----T------CEECC-TTSCCTTTTTTCSEEEECCCC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCCc-----c------ceeec-ccchhHHhcCCCCEEEECCCCc
Confidence            78999999999999999999999988  999999876211     0      01110 0122357789999999998864


Q ss_pred             CC---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          121 RK---PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       121 ~~---~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..   ......++...|+.....+++.+.+...-..+|.+|
T Consensus       213 ~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~S  253 (516)
T 3oh8_A          213 IFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISAS  253 (516)
T ss_dssp             ----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEE
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence            22   122345677889999999999854443323444443

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.99  E-value=1.1e-05  Score=71.13  Aligned_cols=101  Identities=19%  Similarity=0.237  Sum_probs=69.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-----CCchhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-----QPQLENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-----t~d~~~al~~ADiVIi~  116 (353)
                      |||.|+||+|++|++++..|+..|.  +|++++++...     +...   ..+..+..     ..++.++++++|+||.+
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~-----~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~   70 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDY--QIYAGARKVEQ-----VPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINV   70 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSC--EEEEEESSGGG-----SCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCccc-----hhhc---CCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence            6999999999999999999999887  99999987521     1111   22222211     12456778999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +|.....      .+..|+.....+++.+++.... .+|++|.
T Consensus        71 ag~~~~~------~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS  106 (219)
T 3dqp_A           71 SGSGGKS------LLKVDLYGAVKLMQAAEKAEVK-RFILLST  106 (219)
T ss_dssp             CCCTTSS------CCCCCCHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             CcCCCCC------cEeEeHHHHHHHHHHHHHhCCC-EEEEECc
Confidence            9865421      3355677777888888776543 4454443

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=97.98  E-value=2.5e-05  Score=77.76  Aligned_cols=166  Identities=11%  Similarity=0.056  Sum_probs=99.9

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhC---CCCcEEEEEeCCCcHHH-HHHHhcCC--------------CCCeEEEEeCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKIN---PLVSVLHLYDVVNTPGV-TADISHMD--------------TGAVVRGFLGQ  100 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~---~~~~el~L~D~~~~~~~-~~dl~~~~--------------~~~~v~~~~~t  100 (353)
                      .++++|.|+||+|++|++++..|++.   |.  +|++++++..... ...+.+..              ....+..+.+.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~--~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDG--RLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTC--EEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCC--EEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            44679999999999999999999887   45  9999998762211 11121110              01234443221


Q ss_pred             ----------CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHH
Q 018618          101 ----------PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  170 (353)
Q Consensus       101 ----------~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~  170 (353)
                                .++.++++++|+||.+++....  ....+.+..|+....++++.+.+.....+|.+.|--+....     
T Consensus       149 l~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~-----  221 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAI-----  221 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTS-----
T ss_pred             CCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCcc-----
Confidence                      1345667899999999986533  23334568899999999999988765555555552111000     


Q ss_pred             HHHHhCCCCCC-----------------ceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEee
Q 018618          171 VFKKAGTYDPK-----------------KLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGG  216 (353)
Q Consensus       171 ~~~~~~~~~~~-----------------kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~  216 (353)
                         ....++.+                 ..+|.+.....++-..+++..|++..-++ +.|+|.
T Consensus       222 ---~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          222 ---EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILAD  282 (478)
T ss_dssp             ---CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECC
T ss_pred             ---CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCC
Confidence               00001111                 12455555555566666666787765553 567774

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=97.97  E-value=2.5e-05  Score=74.04  Aligned_cols=162  Identities=9%  Similarity=0.046  Sum_probs=94.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC-----CCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-----GMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~-----~ADiVI  114 (353)
                      .|+|.|+||+|++|++++..|+..| .  +|+++|.+........+........+.   ....++++++     ++|+||
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~~~~~~d~Vi  120 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGIT--DILVVDNLKDGTKFVNLVDLNIADYMD---KEDFLIQIMAGEEFGDVEAIF  120 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCC--CEEEEECCSSGGGGGGTTTSCCSEEEE---HHHHHHHHHTTCCCSSCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCc--EEEEEecCCCcchhhcccCceEeeecC---cHHHHHHHHhhcccCCCCEEE
Confidence            3689999999999999999999988 6  889999865211111121111111111   1123445565     599999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CC------chhHHHHHHHHHhCCCCCCceEeec
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VN------STVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~------~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      .+++.......+..+.+..|+.....+++.+.+...  .+|++|.. +.      .++        ......+...+|.+
T Consensus       121 h~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~--r~V~~SS~~v~g~~~~~~~~--------E~~~~~p~~~Y~~s  190 (357)
T 2x6t_A          121 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTSDFIE--------SREYEKPLNVFGYS  190 (357)
T ss_dssp             ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEEEGGGGCSCSSCCCS--------SGGGCCCSSHHHHH
T ss_pred             ECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcchHHhCCCCCCCcC--------CcCCCCCCChhHHH
Confidence            999865433345667788999999999999988765  44444321 10      000        00001123345555


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      .....++-..+++..|++..-++ +.++|..
T Consensus       191 K~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~  221 (357)
T 2x6t_A          191 KFLFDEYVRQILPEANSQIVGFRYFNVYGPR  221 (357)
T ss_dssp             HHHHHHHHHHHGGGCSSCEEEEEECEEESSS
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEecCeEECCC
Confidence            54444554555555555544443 5567753

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=97.96  E-value=2.1e-05  Score=75.41  Aligned_cols=170  Identities=14%  Similarity=0.012  Sum_probs=99.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----CchhhhhCCCcEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMDLVI  114 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~ADiVI  114 (353)
                      ++|||.|+||+|++|++++..|+..| .  +|+++|++..... ..+..   ...+..+...    .++.++++++|+||
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~--~V~~~~r~~~~~~-~~l~~---~~~v~~~~~Dl~d~~~l~~~~~~~d~Vi  104 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVN--QVHVVDNLLSAEK-INVPD---HPAVRFSETSITDDALLASLQDEYDYVF  104 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCS--EEEEECCCTTCCG-GGSCC---CTTEEEECSCTTCHHHHHHCCSCCSEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCc--eEEEEECCCCCch-hhccC---CCceEEEECCCCCHHHHHHHhhCCCEEE
Confidence            35799999999999999999999988 7  9999998651100 01110   1233333211    23456778999999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhh-CCCcEEEEecCC-CCchhHHHHHHHH--HhC---CC-CCCceE
Q 018618          115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKC-CPNATVNLISNP-VNSTVPIAAEVFK--KAG---TY-DPKKLL  184 (353)
Q Consensus       115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~-~p~a~viv~tNP-v~~~t~~~~~~~~--~~~---~~-~~~kvi  184 (353)
                      .+++.....  ..+..+.+..|+.....+++.+.+. ... .+|.+|.. +.-...  ...+.  ...   .. .+...+
T Consensus       105 h~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~V~~SS~~vyg~~~--~~~~~~~E~~~~~~~~~~~~~Y  181 (377)
T 2q1s_A          105 HLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLK-KVVYSAAGCSIAEKT--FDDAKATEETDIVSLHNNDSPY  181 (377)
T ss_dssp             ECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCC-EEEEEEEC----------------CCCCCCCSSCCCSHH
T ss_pred             ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEeCCHHHcCCCC--CCCcCcccccccccccCCCCch
Confidence            998754211  1234567788999999999999876 333 34444432 111000  00001  110   11 233455


Q ss_pred             eechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          185 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      |.+.....++-..+++..|++..-++ +.++|...
T Consensus       182 ~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          182 SMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCC
Confidence            66655556666666677787665553 56788644

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=97.96  E-value=1.1e-05  Score=76.87  Aligned_cols=111  Identities=16%  Similarity=0.150  Sum_probs=75.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-----CchhhhhCCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-----PQLENALTGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-----~d~~~al~~ADiV  113 (353)
                      .+|||.|+||+|++|++++..|+.. |+  +|+.+|++....  .++..   ...++.+...     ..+.++++++|+|
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~--~~~~~---~~~v~~~~~Dl~~d~~~~~~~~~~~d~V   95 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDW--EVFGMDMQTDRL--GDLVK---HERMHFFEGDITINKEWVEYHVKKCDVI   95 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSC--EEEEEESCCTTT--GGGGG---STTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCC--EEEEEeCChhhh--hhhcc---CCCeEEEeCccCCCHHHHHHHhccCCEE
Confidence            3579999999999999999999887 77  999999875210  11111   1223332211     2344677899999


Q ss_pred             EEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          114 IIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       114 Ii~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      |.+|+......  .+..+.+..|+.....+++.+++.+  ..+|.+|.
T Consensus        96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS  141 (372)
T 3slg_A           96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPST  141 (372)
T ss_dssp             EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECC
T ss_pred             EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCc
Confidence            99987543211  2344667889999999999999887  45555543

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=97.96  E-value=2e-05  Score=75.68  Aligned_cols=170  Identities=15%  Similarity=0.054  Sum_probs=99.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi  115 (353)
                      .+|||.|+||+|++|++++..|+..|+  +|+++|++.....  .+..    ..+..+..    ..++.++++++|+||+
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~----~~v~~~~~Dl~d~~~~~~~~~~~d~Vih   99 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGH--YVIASDWKKNEHM--TEDM----FCDEFHLVDLRVMENCLKVTEGVDHVFN   99 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCSSS--CGGG----TCSEEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCC--eEEEEECCCccch--hhcc----CCceEEECCCCCHHHHHHHhCCCCEEEE
Confidence            357999999999999999999999887  9999998752110  0111    11222111    1235577899999999


Q ss_pred             cCCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHH---HHHHHHhC--CCCCCceEeec
Q 018618          116 PAGVPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA---AEVFKKAG--TYDPKKLLGVT  187 (353)
Q Consensus       116 ~ag~~~~~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~---~~~~~~~~--~~~~~kviG~t  187 (353)
                      +++.....   ..+..+.+..|+.....+++.+.+....-+|.+.|--+.....-.   ...+....  ..++...+|.+
T Consensus       100 ~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~s  179 (379)
T 2c5a_A          100 LAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLE  179 (379)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred             CceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHH
Confidence            98864321   234566778899999999999987654444443332111100000   00000000  12233445555


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      .....++-..+++..|++..-++ +.++|..
T Consensus       180 K~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~  210 (379)
T 2c5a_A          180 KLATEELCKHYNKDFGIECRIGRFHNIYGPF  210 (379)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEEeCceeCcC
Confidence            55555565666666777655554 5677754

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.95  E-value=6.9e-06  Score=73.34  Aligned_cols=100  Identities=19%  Similarity=0.163  Sum_probs=66.6

Q ss_pred             hcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEE-EeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC
Q 018618           33 CRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHL-YDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        33 ~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L-~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~  109 (353)
                      |.-..+..+|||+|||+ |.+|..++..|...|+  ++.+ +|+++  .+..+.++.     ....    +++ .+++++
T Consensus        15 ~~~~~~m~mmkI~IIG~-G~mG~~la~~l~~~g~--~V~~v~~r~~~~~~~l~~~~g-----~~~~----~~~-~~~~~~   81 (220)
T 4huj_A           15 TENLYFQSMTTYAIIGA-GAIGSALAERFTAAQI--PAIIANSRGPASLSSVTDRFG-----ASVK----AVE-LKDALQ   81 (220)
T ss_dssp             --CTTGGGSCCEEEEEC-HHHHHHHHHHHHHTTC--CEEEECTTCGGGGHHHHHHHT-----TTEE----ECC-HHHHTT
T ss_pred             ccchhhhcCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCCHHHHHHHHHHhC-----CCcc----cCh-HHHHhc
Confidence            34444555689999998 9999999999999887  8888 89876  232222221     1111    123 466899


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      +|+||++...                ..+.++++.+.. .++.+|+.++||..
T Consensus        82 aDvVilavp~----------------~~~~~v~~~l~~-~~~~ivi~~~~g~~  117 (220)
T 4huj_A           82 ADVVILAVPY----------------DSIADIVTQVSD-WGGQIVVDASNAID  117 (220)
T ss_dssp             SSEEEEESCG----------------GGHHHHHTTCSC-CTTCEEEECCCCBC
T ss_pred             CCEEEEeCCh----------------HHHHHHHHHhhc-cCCCEEEEcCCCCC
Confidence            9999998521                124455556655 45678888899985

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.94  E-value=1.8e-05  Score=69.59  Aligned_cols=99  Identities=17%  Similarity=0.213  Sum_probs=62.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||+|+||+|.+|+.++..|...|+  +|.++|+++.  .....++........+..    ++++++++++|+||++...
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~D~Vi~~~~~   74 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGH--EIVVGSRREEKAEAKAAEYRRIAGDASITG----MKNEDAAEACDIAVLTIPW   74 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSHHHHHHHHHHHHHHHSSCCEEE----EEHHHHHHHCSEEEECSCH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhccccccCCCCh----hhHHHHHhcCCEEEEeCCh
Confidence            6899999559999999999998887  8999998752  111111110000012331    3567888999999998531


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      .                .+.++++.+....++.+++..+|+.+
T Consensus        75 ~----------------~~~~~~~~l~~~~~~~~vi~~~~g~~  101 (212)
T 1jay_A           75 E----------------HAIDTARDLKNILREKIVVSPLVPVS  101 (212)
T ss_dssp             H----------------HHHHHHHHTHHHHTTSEEEECCCCEE
T ss_pred             h----------------hHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence            1                12233444443335778888888765

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=97.94  E-value=1.2e-05  Score=84.10  Aligned_cols=101  Identities=18%  Similarity=0.185  Sum_probs=68.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHH--HH----HHhcCC-C--------CCeEEEEeCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGV--TA----DISHMD-T--------GAVVRGFLGQP  101 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~--~~----dl~~~~-~--------~~~v~~~~~t~  101 (353)
                      +.+||+|||+ |.+|+.+|..++..|+  +|+++|+++  + .+.  ..    .+.... .        ...++.   ++
T Consensus       313 ~i~kV~VIGa-G~MG~~iA~~la~aG~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~---~~  386 (715)
T 1wdk_A          313 DVKQAAVLGA-GIMGGGIAYQSASKGT--PILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP---TL  386 (715)
T ss_dssp             CCSSEEEECC-HHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE---ES
T ss_pred             cCCEEEEECC-ChhhHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEE---EC
Confidence            3578999999 9999999999999998  999999986  1 111  00    011111 0        012443   35


Q ss_pred             chhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc
Q 018618          102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  163 (353)
Q Consensus       102 d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  163 (353)
                      |+ +++++||+||++.              .++..+.+++...+.+++ |++++  +||.+.+
T Consensus       387 d~-~~~~~aDlVIeaV--------------~e~~~vk~~v~~~l~~~~~~~~Il--asntStl  432 (715)
T 1wdk_A          387 SY-GDFGNVDLVVEAV--------------VENPKVKQAVLAEVENHVREDAIL--ASNTSTI  432 (715)
T ss_dssp             SS-TTGGGCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTCEE--EECCSSS
T ss_pred             CH-HHHCCCCEEEEcC--------------CCCHHHHHHHHHHHHhhCCCCeEE--EeCCCCC
Confidence            66 7899999999985              234556677788888887 46644  6666544

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=97.94  E-value=8.6e-06  Score=74.90  Aligned_cols=99  Identities=21%  Similarity=0.188  Sum_probs=71.2

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIP  116 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~  116 (353)
                      ++++||.|+||+|++|++++..|+..|.  +|+.+|++.     .|+.+            ..+++++++  ++|+||.+
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~-----~Dl~d------------~~~~~~~~~~~~~d~vih~   70 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNV--EVIPTDVQD-----LDITN------------VLAVNKFFNEKKPNVVINC   70 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSE--EEEEECTTT-----CCTTC------------HHHHHHHHHHHCCSEEEEC
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCC--eEEeccCcc-----CCCCC------------HHHHHHHHHhcCCCEEEEC
Confidence            4578999999999999999999998886  899999752     12211            123456666  79999999


Q ss_pred             CCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          117 AGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       117 ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ++.....  ..+..+.+..|+.....+++.+.+...  .+|++|
T Consensus        71 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--~iv~~S  112 (292)
T 1vl0_A           71 AAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA--EIVQIS  112 (292)
T ss_dssp             CCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             CccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEec
Confidence            8854210  123456678899999999999988754  555544

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=97.92  E-value=1.7e-05  Score=75.41  Aligned_cols=114  Identities=18%  Similarity=0.215  Sum_probs=76.9

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCC----CchhhhhCCCc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQ----PQLENALTGMD  111 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~AD  111 (353)
                      .+.++|.|+||+|++|++++..|++. |. .+|+++|+++.  .....++..    ..+..+...    .++.++++++|
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~-~~V~~~~r~~~~~~~~~~~~~~----~~v~~~~~Dl~d~~~l~~~~~~~D   93 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNA-KKIIVYSRDELKQSEMAMEFND----PRMRFFIGDVRDLERLNYALEGVD   93 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCC-SEEEEEESCHHHHHHHHHHHCC----TTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCC-CEEEEEECChhhHHHHHHHhcC----CCEEEEECCCCCHHHHHHHHhcCC
Confidence            34569999999999999999999887 63 28999998752  222222322    223332211    23456789999


Q ss_pred             EEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          112 LVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       112 iVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +||.+|+....+.  ....+.+..|+.....+++.+.+.... .+|.+|
T Consensus        94 ~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~-~~V~~S  141 (344)
T 2gn4_A           94 ICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAIS-QVIALS  141 (344)
T ss_dssp             EEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEEC
T ss_pred             EEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCC-EEEEec
Confidence            9999998653211  234567788999999999999887544 344443

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=97.91  E-value=1e-05  Score=75.34  Aligned_cols=169  Identities=12%  Similarity=0.098  Sum_probs=97.6

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCC--Cc
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTG--MD  111 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~--AD  111 (353)
                      +.+.++|.|+||+|++|++++..|+..|.  +|+++|++.....   +       .+..+..    ..++.+++++  .|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~---l-------~~~~~~~Dl~d~~~~~~~~~~~~~d   76 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV--EVFGTSRNNEAKL---P-------NVEMISLDIMDSQRVKKVISDIKPD   76 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCTTCCC---T-------TEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC--EEEEEecCCcccc---c-------eeeEEECCCCCHHHHHHHHHhcCCC
Confidence            34567999999999999999999999887  9999998752110   1       1222211    1234455665  89


Q ss_pred             EEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeech
Q 018618          112 LVIIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTM  188 (353)
Q Consensus       112 iVIi~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~  188 (353)
                      +||.+++....  ...+..+.+..|+.....+++.+.+......+|++|.. +.....--...+......++...+|.+.
T Consensus        77 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK  156 (321)
T 2pk3_A           77 YIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSK  156 (321)
T ss_dssp             EEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHH
T ss_pred             EEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHH
Confidence            99999886431  11245667789999999999999766434455555432 1100000000000111123344556655


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          189 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      ....++-..+++..|++..-++ +.++|...
T Consensus       157 ~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~  187 (321)
T 2pk3_A          157 ASVGMLARQYVKAYGMDIIHTRTFNHIGPGQ  187 (321)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHHHHcCCCEEEEEeCcccCcCC
Confidence            5555665666666676654443 46777543

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=97.90  E-value=5.1e-05  Score=75.08  Aligned_cols=111  Identities=16%  Similarity=0.144  Sum_probs=72.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--C--------------CCeEEEEeCCCchh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQLE  104 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--~--------------~~~v~~~~~t~d~~  104 (353)
                      ..+|+|||+ |+||..+|..|+..|+  +|+++|+++.+..  .+....  .              ...++.   ++|++
T Consensus         8 ~~~~~vIGl-G~vG~~~A~~La~~G~--~V~~~D~~~~kv~--~l~~g~~~~~epgl~~~~~~~~~~g~l~~---ttd~~   79 (446)
T 4a7p_A            8 SVRIAMIGT-GYVGLVSGACFSDFGH--EVVCVDKDARKIE--LLHQNVMPIYEPGLDALVASNVKAGRLSF---TTDLA   79 (446)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCSTTHH--HHTTTCCSSCCTTHHHHHHHHHHTTCEEE---ESCHH
T ss_pred             ceEEEEEcC-CHHHHHHHHHHHHCCC--EEEEEeCCHHHHH--HHhcCCCCccCCCHHHHHHhhcccCCEEE---ECCHH
Confidence            459999999 9999999999999998  9999999873211  222211  0              123443   46888


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec-CCCCch
Q 018618          105 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS-NPVNST  164 (353)
Q Consensus       105 ~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t-NPv~~~  164 (353)
                      +++++||+||++.+.|...+..     .-++..++++++.+.++. ++.+|+..| -|.+..
T Consensus        80 ea~~~aDvvii~Vptp~~~~~~-----~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgtt  136 (446)
T 4a7p_A           80 EGVKDADAVFIAVGTPSRRGDG-----HADLSYVFAAAREIAENLTKPSVIVTKSTVPVGTG  136 (446)
T ss_dssp             HHHTTCSEEEECCCCCBCTTTC-----CBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTHH
T ss_pred             HHHhcCCEEEEEcCCCCccccC-----CccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHH
Confidence            8999999999998777542111     112334555556666555 455555543 455443

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=97.89  E-value=4.8e-05  Score=71.40  Aligned_cols=112  Identities=17%  Similarity=0.115  Sum_probs=73.3

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-C---chhhhhC--CCcE
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-P---QLENALT--GMDL  112 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~---d~~~al~--~ADi  112 (353)
                      -+.|+|.|+||+|++|++++..|+..|.  +|+++|++.....  ++....  ..+..+... +   ++.++++  ++|+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~~~D~   91 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGH--EILVIDNFATGKR--EVLPPV--AGLSVIEGSVTDAGLLERAFDSFKPTH   91 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTC--EEEEEECCSSSCG--GGSCSC--TTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCccch--hhhhcc--CCceEEEeeCCCHHHHHHHHhhcCCCE
Confidence            3457999999999999999999999887  9999998641100  011100  223322111 2   3446677  9999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          113 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       113 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ||+++|..........+ +..|+.....+++.+.+.... .+|++|
T Consensus        92 vih~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~-~iV~~S  135 (330)
T 2pzm_A           92 VVHSAAAYKDPDDWAED-AATNVQGSINVAKAASKAGVK-RLLNFQ  135 (330)
T ss_dssp             EEECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHTCS-EEEEEE
T ss_pred             EEECCccCCCccccChh-HHHHHHHHHHHHHHHHHcCCC-EEEEec
Confidence            99999865322222233 688999999999999876543 444444

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=97.89  E-value=5.6e-05  Score=71.19  Aligned_cols=169  Identities=12%  Similarity=0.032  Sum_probs=96.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||.|+||+|++|++++..|+..|.  +|+++|++.  ....   +.+......+..+... -...++.++|+||.+++
T Consensus        27 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~~D-~~~~~~~~~d~vih~A~  100 (343)
T 2b69_A           27 RKRILITGGAGFVGSHLTDKLMMDGH--EVTVVDNFFTGRKRN---VEHWIGHENFELINHD-VVEPLYIEVDQIYHLAS  100 (343)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCGGG---TGGGTTCTTEEEEECC-TTSCCCCCCSEEEECCS
T ss_pred             CCEEEEEcCccHHHHHHHHHHHHCCC--EEEEEeCCCccchhh---hhhhccCCceEEEeCc-cCChhhcCCCEEEECcc
Confidence            46999999999999999999999887  999999764  1111   1111111234443221 11245789999999987


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchh--HHHHHHHH-HhCCCCCCceEeechhhHH
Q 018618          119 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTV--PIAAEVFK-KAGTYDPKKLLGVTMLDVV  192 (353)
Q Consensus       119 ~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t--~~~~~~~~-~~~~~~~~kviG~t~ld~~  192 (353)
                      .....  ..+..+.+..|+.....+++.+.+...  .++++|.. +....  ....+-.+ .....++...+|.+.....
T Consensus       101 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E  178 (343)
T 2b69_A          101 PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE  178 (343)
T ss_dssp             CCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHH
Confidence            54211  123456678899999999999988764  55555421 10000  00000000 0001112233555555555


Q ss_pred             HHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          193 RANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       193 R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ++-..+++..|++..-++ +.++|..
T Consensus       179 ~~~~~~~~~~~~~~~ilrp~~v~G~~  204 (343)
T 2b69_A          179 TMCYAYMKQEGVEVRVARIFNTFGPR  204 (343)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             HHHHHHHHHhCCcEEEEEEcceeCcC
Confidence            555566666777654443 4577753

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=97.88  E-value=4.9e-05  Score=71.23  Aligned_cols=167  Identities=14%  Similarity=0.066  Sum_probs=96.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-C----chhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-P----QLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~----d~~~al~~ADiVIi  115 (353)
                      |||.|+||+|++|++++..|+.. |.  +|+++|++....  .++..   ...+..+... +    .++++++++|+||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~--~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~d~vih   73 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHY--EVYGLDIGSDAI--SRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVVLP   73 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC--EEEEEESCCGGG--GGGTT---CTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCC--EEEEEeCCcchH--HHhhc---CCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence            58999999999999999999887 67  899999876211  11111   1223332111 1    24457789999999


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC----C---CCCceEee
Q 018618          116 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT----Y---DPKKLLGV  186 (353)
Q Consensus       116 ~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~----~---~~~kviG~  186 (353)
                      +++.....  ..+..+.+..|+.....+++.+.+..  ..+|.+|... +....-...+.....    .   ++...+|.
T Consensus        74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~-v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~  150 (345)
T 2bll_A           74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSE-VYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV  150 (345)
T ss_dssp             CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGG-GGBTCCCSSBCTTTCCCBCCCTTCGGGHHHH
T ss_pred             cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHH-HcCCCCCCCcCCcccccccCcccCcccccHH
Confidence            98754211  12344567788888999999888765  4555555421 000000000000000    0   01124555


Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      +.....++-..+++..|++..-++ +.++|...
T Consensus       151 sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          151 SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             HHHHHHHHHHHHHHHHCCCEEEEEECSEECSSC
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCc
Confidence            555555666666677777655554 56777653

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.88  E-value=2.2e-05  Score=69.30  Aligned_cols=99  Identities=19%  Similarity=0.240  Sum_probs=64.4

Q ss_pred             CCe-EEEEcCCCCcHHHHHHHHH-hCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEE
Q 018618           41 GFK-VAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~K-I~IiGa~G~vG~~la~~l~-~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVI  114 (353)
                      +|| |.|+||+|.+|+.++..|+ ..|.  +|+++++++.. ...++...  ...+..+..    ..+++++++++|+||
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~--~V~~~~r~~~~-~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vv   78 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDM--HITLYGRQLKT-RIPPEIID--HERVTVIEGSFQNPGXLEQAVTNAEVVF   78 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCC--EEEEEESSHHH-HSCHHHHT--STTEEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCc--eEEEEecCccc-cchhhccC--CCceEEEECCCCCHHHHHHHHcCCCEEE
Confidence            345 9999999999999999999 7888  99999986420 11222111  122232211    134457789999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      .++|..             |+. .+.+++.+++.....+|.+.|
T Consensus        79 ~~ag~~-------------n~~-~~~~~~~~~~~~~~~iv~iSs  108 (221)
T 3r6d_A           79 VGAMES-------------GSD-MASIVKALSRXNIRRVIGVSM  108 (221)
T ss_dssp             ESCCCC-------------HHH-HHHHHHHHHHTTCCEEEEEEE
T ss_pred             EcCCCC-------------Chh-HHHHHHHHHhcCCCeEEEEee
Confidence            998743             344 778888887765444443333

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=97.88  E-value=0.00012  Score=69.42  Aligned_cols=162  Identities=15%  Similarity=0.054  Sum_probs=89.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH---HHHHHHhcCC--CCCeEEEEeCC----CchhhhhCC--
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMD--TGAVVRGFLGQ----PQLENALTG--  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~---~~~~dl~~~~--~~~~v~~~~~t----~d~~~al~~--  109 (353)
                      +++|.|+||+|++|++++..|+..|.  +|+++|++...   ....++....  ....+..+...    .++.+++++  
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGY--EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ   78 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcC
Confidence            36899999999999999999999887  99999986521   1111111100  01233332111    123445554  


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCC--CcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceE
Q 018618          110 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLL  184 (353)
Q Consensus       110 ADiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kvi  184 (353)
                      .|+||+++|.....  ..+....+..|+.....+++.+.+...  ...+|++|.. +..-..  ...+......++...+
T Consensus        79 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~--~~~~~E~~~~~~~~~Y  156 (372)
T 1db3_A           79 PDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQ--EIPQKETTPFYPRSPY  156 (372)
T ss_dssp             CSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCC--SSSBCTTSCCCCCSHH
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCC--CCCCCccCCCCCCChH
Confidence            69999999864321  123455678899999999999987764  1455555431 100000  0000011112333455


Q ss_pred             eechhhHHHHHHHHHHHhCCCC
Q 018618          185 GVTMLDVVRANTFVAEVLGLDP  206 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~v~~  206 (353)
                      |.+.....++-..+++.++++.
T Consensus       157 ~~sK~~~e~~~~~~~~~~~~~~  178 (372)
T 1db3_A          157 AVAKLYAYWITVNYRESYGMYA  178 (372)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCe
Confidence            6665555566666777777653

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.87  E-value=0.00019  Score=65.76  Aligned_cols=116  Identities=18%  Similarity=0.223  Sum_probs=72.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~  108 (353)
                      ++|.|+||+|.+|..++..|++.|.  +|+++|++.  ......++........+..+. .-+|.   ++++       .
T Consensus        33 k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           33 RLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999987  899999875  222333343322112333321 11232   2222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCC-CcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCP-NATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p-~a~viv~tN  159 (353)
                      +.|+||..+|.....   ..+   ....+..|+..    .+.+.+.+++... .+.|++++.
T Consensus       111 ~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS  172 (279)
T 1xg5_A          111 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININS  172 (279)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcC
Confidence            799999999864321   112   23456677766    7777777776653 466766654

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=97.87  E-value=1.5e-05  Score=72.52  Aligned_cols=92  Identities=16%  Similarity=0.240  Sum_probs=66.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCC--cEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~--~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..|||+|||+ |.+|+.++..|...|..  .+|.++|+++..       .   .  +..   .++.++++++||+||++.
T Consensus         3 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-------~---g--~~~---~~~~~~~~~~~D~vi~~v   66 (262)
T 2rcy_A            3 ENIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSKKN-------T---T--LNY---MSSNEELARHCDIIVCAV   66 (262)
T ss_dssp             SSSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-------S---S--SEE---CSCHHHHHHHCSEEEECS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-------C---c--eEE---eCCHHHHHhcCCEEEEEe
Confidence            4579999999 99999999999887731  389999987632       1   1  222   245677889999999986


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  163 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  163 (353)
                      . +   .            .+.++++.+..+.++..++..+|.++.
T Consensus        67 ~-~---~------------~~~~v~~~l~~~l~~~~vv~~~~gi~~   96 (262)
T 2rcy_A           67 K-P---D------------IAGSVLNNIKPYLSSKLLISICGGLNI   96 (262)
T ss_dssp             C-T---T------------THHHHHHHSGGGCTTCEEEECCSSCCH
T ss_pred             C-H---H------------HHHHHHHHHHHhcCCCEEEEECCCCCH
Confidence            3 1   1            144566667666677888888888765

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=97.86  E-value=6.7e-05  Score=71.32  Aligned_cols=102  Identities=19%  Similarity=0.243  Sum_probs=68.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC-----CcEEEEEeCCCc-----HHHHHHHhcCC--C------CCeEEEEeCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNT-----PGVTADISHMD--T------GAVVRGFLGQPQ  102 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~-----~~el~L~D~~~~-----~~~~~dl~~~~--~------~~~v~~~~~t~d  102 (353)
                      +|||+|||+ |.+|+.++..|+..|.     ..+|.++|+++.     ....+.-.+..  .      ...+..   ++|
T Consensus         8 ~mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~   83 (354)
T 1x0v_A            8 SKKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVA---VPD   83 (354)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEE---ESS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEE---EcC
Confidence            479999999 9999999999988771     028999998764     33333221110  0      112443   256


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      +++++++||+||++...                ..+.++++.+..+. |+.+|+.++|-..
T Consensus        84 ~~~~~~~aD~Vilav~~----------------~~~~~v~~~i~~~l~~~~ivv~~~~Gi~  128 (354)
T 1x0v_A           84 VVQAAEDADILIFVVPH----------------QFIGKICDQLKGHLKANATGISLIKGVD  128 (354)
T ss_dssp             HHHHHTTCSEEEECCCG----------------GGHHHHHHHHTTCSCTTCEEEECCCCBC
T ss_pred             HHHHHcCCCEEEEeCCH----------------HHHHHHHHHHHhhCCCCCEEEEECCccC
Confidence            77889999999998521                12456667777665 5788888888554

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=97.84  E-value=3e-05  Score=71.98  Aligned_cols=103  Identities=14%  Similarity=0.096  Sum_probs=57.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC--CcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG--MDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~--ADiVIi~ag~  119 (353)
                      |||.|+||+|++|++++..|+..|.  +|+++|++....   ...    ..++..   ..++.+++++  +|+||+++|.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~~~----~~Dl~d---~~~~~~~~~~~~~d~vih~A~~   70 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNW--HAVGCGFRRARP---KFE----QVNLLD---SNAVHHIIHDFQPHVIVHCAAE   70 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEC----------------------------CHHHHHHHCCSEEEECC--
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCC--eEEEEccCCCCC---CeE----EecCCC---HHHHHHHHHhhCCCEEEECCcc
Confidence            6899999999999999999999887  999999754220   000    011111   1334566764  8999999886


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          120 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       120 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ....  ..+..+.+..|+.....+++.+.+...  .+|++|
T Consensus        71 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  109 (315)
T 2ydy_A           71 RRPDVVENQPDAASQLNVDASGNLAKEAAAVGA--FLIYIS  109 (315)
T ss_dssp             -----------------CHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             cChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence            4321  123445677899999999999988753  555554

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=97.84  E-value=1.4e-05  Score=73.27  Aligned_cols=96  Identities=22%  Similarity=0.217  Sum_probs=70.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag~  119 (353)
                      |||.|+||+|++|++++..|...|+  +|+.+++.+     .|+.+            ..+++++++  ++|+||++++.
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~-----~D~~d------------~~~~~~~~~~~~~d~vi~~a~~   66 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEY--DIYPFDKKL-----LDITN------------ISQVQQVVQEIRPHIIIHCAAY   66 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTE--EEEEECTTT-----SCTTC------------HHHHHHHHHHHCCSEEEECCCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCC--EEEEecccc-----cCCCC------------HHHHHHHHHhcCCCEEEECCcc
Confidence            4899999999999999999998887  999999733     12211            123445666  79999999886


Q ss_pred             CCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          120 PRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       120 ~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ....  ..+..+....|+.....+++.+.+...  .+|++|
T Consensus        67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~S  105 (287)
T 3sc6_A           67 TKVDQAEKERDLAYVINAIGARNVAVASQLVGA--KLVYIS  105 (287)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEE
T ss_pred             cChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEc
Confidence            5321  135567788999999999999998865  444444

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=97.84  E-value=3.2e-05  Score=70.10  Aligned_cols=99  Identities=16%  Similarity=0.189  Sum_probs=63.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHH------------HHHHhcCCCCCeEEEEeCCCchhhhh
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV------------TADISHMDTGAVVRGFLGQPQLENAL  107 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~------------~~dl~~~~~~~~v~~~~~t~d~~~al  107 (353)
                      ..+||+|||+ |.+|..++..|+..|+  +|.++|+++....            ..++....  .....    .+.++++
T Consensus        18 ~~~kIgiIG~-G~mG~alA~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~e~~   88 (245)
T 3dtt_A           18 QGMKIAVLGT-GTVGRTMAGALADLGH--EVTIGTRDPKATLARAEPDAMGAPPFSQWLPEH--PHVHL----AAFADVA   88 (245)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHTCC-------CCHHHHGGGS--TTCEE----EEHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCChhhhhhhhhhhhhcchhhhHHHhhc--Cceec----cCHHHHH
Confidence            3579999998 9999999999999998  9999998752200            22222211  11221    3457889


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      ++||+||++....            .-.+.+.++.   ....++.+||.++||.+
T Consensus        89 ~~aDvVilavp~~------------~~~~~~~~i~---~~~l~g~ivi~~s~~~~  128 (245)
T 3dtt_A           89 AGAELVVNATEGA------------SSIAALTAAG---AENLAGKILVDIANPLD  128 (245)
T ss_dssp             HHCSEEEECSCGG------------GHHHHHHHHC---HHHHTTSEEEECCCCEE
T ss_pred             hcCCEEEEccCcH------------HHHHHHHHhh---hhhcCCCEEEECCCCCC
Confidence            9999999985211            0112233331   22227888999999873

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=97.83  E-value=5.9e-05  Score=71.09  Aligned_cols=121  Identities=15%  Similarity=0.151  Sum_probs=73.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHH---HhcCCCCCeEEE--EeCCCchhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTAD---ISHMDTGAVVRG--FLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~d---l~~~~~~~~v~~--~~~t~d~~~al~~ADiVIi~  116 (353)
                      |||+|||+ |.+|..++..|.+.|.  +|.++|+++.......   +... .......  ...++|.+++.+++|+||++
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~--~V~~~~r~~~~~i~~~Gl~~~~~-~~g~~~~~~~~~~~~~~~~~~~~DlVila   78 (320)
T 3i83_A            3 LNILVIGT-GAIGSFYGALLAKTGH--CVSVVSRSDYETVKAKGIRIRSA-TLGDYTFRPAAVVRSAAELETKPDCTLLC   78 (320)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHTTC--EEEEECSTTHHHHHHHCEEEEET-TTCCEEECCSCEESCGGGCSSCCSEEEEC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCChHHHHHhCCcEEeec-CCCcEEEeeeeeECCHHHcCCCCCEEEEe
Confidence            79999999 9999999999999887  9999998762111110   1110 1122221  11124555555599999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chh
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TML  189 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~l  189 (353)
                      .....                +.++++.+..+. |+..|+.+.|-++..-.+     .+.  +|.+++++- +..
T Consensus        79 vK~~~----------------~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l-----~~~--~~~~~vl~g~~~~  130 (320)
T 3i83_A           79 IKVVE----------------GADRVGLLRDAVAPDTGIVLISNGIDIEPEV-----AAA--FPDNEVISGLAFI  130 (320)
T ss_dssp             CCCCT----------------TCCHHHHHTTSCCTTCEEEEECSSSSCSHHH-----HHH--STTSCEEEEEEEE
T ss_pred             cCCCC----------------hHHHHHHHHhhcCCCCEEEEeCCCCChHHHH-----HHH--CCCCcEEEEEEEe
Confidence            63221                123345555444 678888888988755322     232  556677654 543

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=97.82  E-value=1.8e-05  Score=70.72  Aligned_cols=114  Identities=19%  Similarity=0.133  Sum_probs=73.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      .++|.|+||+|++|++++..|+..|...+|+++|+++...........   ..+.. .....+++++++++|+||.++|.
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~---~~~~~D~~d~~~~~~~~~~~d~vi~~ag~   94 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV---NQEVVDFEKLDDYASAFQGHDVGFCCLGT   94 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC---EEEECCGGGGGGGGGGGSSCSEEEECCCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCc---eEEecCcCCHHHHHHHhcCCCEEEECCCc
Confidence            358999999999999999999988875689999987611000000110   00110 11123556778899999999875


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ... +....+++..|+.....+++.+.+.... .++++|.
T Consensus        95 ~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~iv~~SS  132 (242)
T 2bka_A           95 TRG-KAGAEGFVRVDRDYVLKSAELAKAGGCK-HFNLLSS  132 (242)
T ss_dssp             CHH-HHHHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             ccc-cCCcccceeeeHHHHHHHHHHHHHCCCC-EEEEEcc
Confidence            421 1123456678888889999988876543 4555543

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.82  E-value=0.00017  Score=66.91  Aligned_cols=101  Identities=18%  Similarity=0.231  Sum_probs=63.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC----CCe-----EEEEeCCCchhhhhCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT----GAV-----VRGFLGQPQLENALTGMD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~----~~~-----v~~~~~t~d~~~al~~AD  111 (353)
                      +|||+|||+ |.+|+.++..|...|+  +|.++|+++...  ..+.....    ...     +... ...+..++++++|
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~r~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~d   76 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGN--DVTLIDQWPAHI--EAIRKNGLIADFNGEEVVANLPIF-SPEEIDHQNEQVD   76 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHH--HHHHHHCEEEEETTEEEEECCCEE-CGGGCCTTSCCCS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCC--cEEEEECCHHHH--HHHHhCCEEEEeCCCeeEecceee-cchhhcccCCCCC
Confidence            479999999 9999999999999887  999999875211  11211110    000     1111 1112223345999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc
Q 018618          112 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  163 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  163 (353)
                      +||++...                ..+.++++.+..+. |+.+|+.++|..+.
T Consensus        77 ~vi~~v~~----------------~~~~~v~~~l~~~l~~~~~iv~~~~g~~~  113 (316)
T 2ew2_A           77 LIIALTKA----------------QQLDAMFKAIQPMITEKTYVLCLLNGLGH  113 (316)
T ss_dssp             EEEECSCH----------------HHHHHHHHHHGGGCCTTCEEEECCSSSCT
T ss_pred             EEEEEecc----------------ccHHHHHHHHHHhcCCCCEEEEecCCCCc
Confidence            99998521                11456667777665 67888888887764

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=97.81  E-value=4.2e-05  Score=73.53  Aligned_cols=175  Identities=12%  Similarity=0.082  Sum_probs=97.0

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH------------------HHHHHhcCCCCCeEEEEeC
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG------------------VTADISHMDTGAVVRGFLG   99 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~------------------~~~dl~~~~~~~~v~~~~~   99 (353)
                      +.+.++|.|+||+|++|++++..|+..|.  +|+++|......                  ...++.... ...+..+..
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~   84 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNY--EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVG   84 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEES
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCC--eEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEEC
Confidence            34568999999999999999999999887  999999753110                  111111000 112222211


Q ss_pred             C-C---chhhhhCC--CcEEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHH
Q 018618          100 Q-P---QLENALTG--MDLVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIA  168 (353)
Q Consensus       100 t-~---d~~~al~~--ADiVIi~ag~~~~~--g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~  168 (353)
                      . +   ++.+++++  +|+||++||.....  ..+.   ...+..|+.....+++.+.+......+|++|... +.... 
T Consensus        85 Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~-vyg~~-  162 (404)
T 1i24_A           85 DICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMG-EYGTP-  162 (404)
T ss_dssp             CTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGG-GGCCC-
T ss_pred             CCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHH-HhCCC-
Confidence            1 2   24456676  99999999854211  1122   2356789999999999999886533555554321 00000 


Q ss_pred             HHHHHHh--------------CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          169 AEVFKKA--------------GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       169 ~~~~~~~--------------~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ...+...              ...++...+|.+.....++-..+++.+|++..-++ +.|+|..
T Consensus       163 ~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~  226 (404)
T 1i24_A          163 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVK  226 (404)
T ss_dssp             SSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSC
T ss_pred             CCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCC
Confidence            0000000              01222334555555545555566677777655554 5678864

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=97.81  E-value=1.2e-05  Score=74.55  Aligned_cols=167  Identities=16%  Similarity=0.067  Sum_probs=92.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||.|+||+|++|++++..|+..|.  +|+.+|++...  +....+.+......+..      ...++.++|+||.+++
T Consensus         7 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~Dl~~~d~vi~~a~   78 (321)
T 3vps_A            7 KHRILITGGAGFIGGHLARALVASGE--EVTVLDDLRVPPMIPPEGTGKFLEKPVLEL------EERDLSDVRLVYHLAS   78 (321)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--CEEEECCCSSCCSSCCTTSSEEECSCGGGC------CHHHHTTEEEEEECCC
T ss_pred             CCeEEEECCCChHHHHHHHHHHHCCC--EEEEEecCCcccccchhhhhhhccCCCeeE------EeCccccCCEEEECCc
Confidence            56999999999999999999999987  89999986521  00000110000011111      1344569999999987


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHH
Q 018618          119 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANT  196 (353)
Q Consensus       119 ~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~  196 (353)
                      .....  .....+.+. |+.....+++.+.+....-+|.+.|.-+.....  ...+.......+...+|.+.....++-.
T Consensus        79 ~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~--~~~~~E~~~~~p~~~Y~~sK~~~E~~~~  155 (321)
T 3vps_A           79 HKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQAD--TLPTPEDSPLSPRSPYAASKVGLEMVAG  155 (321)
T ss_dssp             CCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCS--SSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred             cCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCC--CCCCCCCCCCCCCChhHHHHHHHHHHHH
Confidence            54210  111223345 999999999999988744444333321100000  0000011112334455666555555656


Q ss_pred             HHHHHhCC-CCCCCc-ceEEeecC
Q 018618          197 FVAEVLGL-DPRDVD-VPVVGGHA  218 (353)
Q Consensus       197 ~lA~~l~v-~~~~v~-~~viG~hg  218 (353)
                      .+++..|+ +..-++ +.++|...
T Consensus       156 ~~~~~~~~~~~~ilRp~~v~G~~~  179 (321)
T 3vps_A          156 AHQRASVAPEVGIVRFFNVYGPGE  179 (321)
T ss_dssp             HHHHSSSSCEEEEEEECEEECTTC
T ss_pred             HHHHHcCCCceEEEEeccccCcCC
Confidence            66666666 443343 45777543

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=97.80  E-value=5.8e-05  Score=70.94  Aligned_cols=110  Identities=17%  Similarity=0.062  Sum_probs=71.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CC---chhhhhCC--CcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALTG--MDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~---d~~~al~~--ADiVI  114 (353)
                      +|+|.|+||+|++|++++..|+..|.  +|+++|++.... ...+...   ..+..+.. -+   ++.+++++  +|+||
T Consensus        21 ~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~-~~~l~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~D~vi   94 (333)
T 2q1w_A           21 MKKVFITGICGQIGSHIAELLLERGD--KVVGIDNFATGR-REHLKDH---PNLTFVEGSIADHALVNQLIGDLQPDAVV   94 (333)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCC-GGGSCCC---TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCCccc-hhhHhhc---CCceEEEEeCCCHHHHHHHHhccCCcEEE
Confidence            46999999999999999999999887  999999865110 0011111   22332211 12   24456777  99999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      .+++..........+ +..|+.....+++.+.+.... .+|++|
T Consensus        95 h~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~~~-~iV~~S  136 (333)
T 2q1w_A           95 HTAASYKDPDDWYND-TLTNCVGGSNVVQAAKKNNVG-RFVYFQ  136 (333)
T ss_dssp             ECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHTTCS-EEEEEE
T ss_pred             ECceecCCCccCChH-HHHHHHHHHHHHHHHHHhCCC-EEEEEC
Confidence            999865322222223 788999999999998876433 444443

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=97.80  E-value=8.1e-05  Score=65.86  Aligned_cols=76  Identities=25%  Similarity=0.355  Sum_probs=56.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .+||+|||+ |.+|+.++..|...|.  +|.++|+++.                           ++++||+||++.. +
T Consensus        19 ~~~I~iiG~-G~mG~~la~~l~~~g~--~V~~~~~~~~---------------------------~~~~aD~vi~av~-~   67 (209)
T 2raf_A           19 GMEITIFGK-GNMGQAIGHNFEIAGH--EVTYYGSKDQ---------------------------ATTLGEIVIMAVP-Y   67 (209)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECTTCC---------------------------CSSCCSEEEECSC-H
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEcCCHH---------------------------HhccCCEEEEcCC-c
Confidence            469999998 9999999999999887  9999997643                           4578999999852 1


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                                     +.+.++++.+..+.++.+++.++|+.+
T Consensus        68 ---------------~~~~~v~~~l~~~~~~~~vi~~~~g~~   94 (209)
T 2raf_A           68 ---------------PALAALAKQYATQLKGKIVVDITNPLN   94 (209)
T ss_dssp             ---------------HHHHHHHHHTHHHHTTSEEEECCCCBC
T ss_pred             ---------------HHHHHHHHHHHHhcCCCEEEEECCCCC
Confidence                           113344445544334778888899765

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.80  E-value=0.00022  Score=61.40  Aligned_cols=103  Identities=15%  Similarity=0.160  Sum_probs=68.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi~a  117 (353)
                      |||.|+||+|++|++++..|++.|.  +|++++++...     +.... ...+..+..    ..++.++++++|+||.++
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~--~V~~~~r~~~~-----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a   75 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSR-----LPSEG-PRPAHVVVGDVLQAADVDKTVAGQDAVIVLL   75 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCGGG-----SCSSS-CCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC--eEEEEEeChhh-----ccccc-CCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence            6999999999999999999999887  99999987521     11110 112222211    124557789999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      |.......     ...|+.....+++.+.+.... .++++|
T Consensus        76 ~~~~~~~~-----~~~n~~~~~~~~~~~~~~~~~-~~v~~S  110 (206)
T 1hdo_A           76 GTRNDLSP-----TTVMSEGARNIVAAMKAHGVD-KVVACT  110 (206)
T ss_dssp             CCTTCCSC-----CCHHHHHHHHHHHHHHHHTCC-EEEEEC
T ss_pred             cCCCCCCc-----cchHHHHHHHHHHHHHHhCCC-eEEEEe
Confidence            85432111     136777888888888876544 444444

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=97.79  E-value=8.3e-05  Score=69.03  Aligned_cols=115  Identities=9%  Similarity=-0.036  Sum_probs=69.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CCcH-HHHHHHhcCCC-CCeEEEEe----CCCchhhhhCCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNTP-GVTADISHMDT-GAVVRGFL----GQPQLENALTGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~~~-~~~~dl~~~~~-~~~v~~~~----~t~d~~~al~~ADiVI  114 (353)
                      +||.|+||+|++|++++..|+..|+  +|+.+++ +... .....+..... ...+..+.    ...+++++++++|+||
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   79 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGY--SVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF   79 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCC--EEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence            4899999999999999999999987  8888876 4310 00001111100 01122211    1234667889999999


Q ss_pred             EcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          115 IPAGVPRKPGMT-RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       115 i~ag~~~~~g~~-r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ++|+.......+ ..+++..|+.....+++.+.+...-..+|++|
T Consensus        80 h~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~S  124 (322)
T 2p4h_X           80 HTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTS  124 (322)
T ss_dssp             ECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEE
T ss_pred             EcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Confidence            998632111111 23467889999999999988762123444443

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=97.79  E-value=6.1e-05  Score=72.14  Aligned_cols=108  Identities=14%  Similarity=0.232  Sum_probs=65.8

Q ss_pred             cccCCCCCC-eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHH-HHh-cCC------CCCeEEEEeCCCchh
Q 018618           34 RAKGGAAGF-KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DIS-HMD------TGAVVRGFLGQPQLE  104 (353)
Q Consensus        34 ~~~~~~~~~-KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~-dl~-~~~------~~~~v~~~~~t~d~~  104 (353)
                      .+++..-+| ||+|||+ |.+|..++..|+..|+  +|.++|+++.....+ +.. ...      ....+..   +++++
T Consensus         7 ~~~~~~m~M~kI~iIG~-G~mG~~la~~L~~~G~--~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~   80 (366)
T 1evy_A            7 SAKDELLYLNKAVVFGS-GAFGTALAMVLSKKCR--EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF---TSDVE   80 (366)
T ss_dssp             --CCCCCCEEEEEEECC-SHHHHHHHHHHTTTEE--EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE---ESCHH
T ss_pred             hhhhHhhccCeEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHcCcccccccccccccceee---eCCHH
Confidence            344444445 9999999 9999999999998887  999999875221111 110 000      0112443   24667


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH----HHhhC-C-CcEEEEecCCCCc
Q 018618          105 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG----IAKCC-P-NATVNLISNPVNS  163 (353)
Q Consensus       105 ~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~----i~~~~-p-~a~viv~tNPv~~  163 (353)
                      ++++++|+||++...                ..+.++++.    +..+. | +.+|+.++|-++.
T Consensus        81 ~~~~~aDvVilav~~----------------~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~  129 (366)
T 1evy_A           81 KAYNGAEIILFVIPT----------------QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIER  129 (366)
T ss_dssp             HHHTTCSSEEECCCH----------------HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCT
T ss_pred             HHHcCCCEEEECCCh----------------HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCC
Confidence            789999999998520                123344444    44332 5 6777777776543

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=97.78  E-value=6.7e-06  Score=78.58  Aligned_cols=93  Identities=19%  Similarity=0.222  Sum_probs=67.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||.|+||+|++|++++..|+..|.. +++.+|++.                     ...+++++++++|+||.+++...
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~-~v~~~d~~~---------------------d~~~l~~~~~~~d~Vih~a~~~~   58 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDH-HIFEVHRQT---------------------KEEELESALLKADFIVHLAGVNR   58 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCC-EEEECCTTC---------------------CHHHHHHHHHHCSEEEECCCSBC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCC-EEEEECCCC---------------------CHHHHHHHhccCCEEEECCcCCC
Confidence            79999999999999999999888753 788888740                     11345667788999999988643


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..  ...+....|+.....+++.+++......++.+|
T Consensus        59 ~~--~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~S   93 (369)
T 3st7_A           59 PE--HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSS   93 (369)
T ss_dssp             TT--CSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEE
T ss_pred             CC--CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeC
Confidence            21  222334568888889999988776554455444

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=97.78  E-value=2.5e-05  Score=72.47  Aligned_cols=162  Identities=15%  Similarity=0.075  Sum_probs=94.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhC--CCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT--GMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~--~ADiVIi~ag  118 (353)
                      |||.|+||+|++|++++..|+..|.  +|+++|..... ....+.. .. ..+.. .....+++++++  ++|+||++++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~r~~~~-~~~~~~~-~~-~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   75 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGL--EVAVLDNLATG-KRENVPK-GV-PFFRVDLRDKEGVERAFREFRPTHVSHQAA   75 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEECCCSSC-CGGGSCT-TC-CEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC--EEEEEECCCcC-chhhccc-Ce-EEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence            6899999999999999999999887  89999974310 0001110 00 01110 000123445666  8999999987


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC--------CC-chhHHHHHHHHHhCCCCCCceEeec
Q 018618          119 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP--------VN-STVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       119 ~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP--------v~-~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      .....  ..+....+..|+.....+++.+.+.... .+|++|..        .+ ..+        .....++...+|.+
T Consensus        76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iv~~SS~~~~~g~~~~~~~~~--------E~~~~~~~~~Y~~s  146 (311)
T 2p5y_A           76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVE-KLVFASTGGAIYGEVPEGERAE--------ETWPPRPKSPYAAS  146 (311)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEHHHHHCCCCTTCCBC--------TTSCCCCCSHHHHH
T ss_pred             ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEeCCChhhcCCCCCCCCcC--------CCCCCCCCChHHHH
Confidence            54210  1234456788999999999998876543 44444321        00 000        00111233456666


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      .....++-..+++..|++..-++ +.++|..
T Consensus       147 K~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~  177 (311)
T 2p5y_A          147 KAAFEHYLSVYGQSYGLKWVSLRYGNVYGPR  177 (311)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEEEECEEECTT
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEeeccccCcC
Confidence            55556666667777777655554 4577753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=97.78  E-value=6.7e-05  Score=70.49  Aligned_cols=106  Identities=22%  Similarity=0.246  Sum_probs=70.0

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCC-----CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhh-
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENAL-  107 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~-----~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al-  107 (353)
                      +.+.|+|.|+||+|++|++++..|+..|.     ..+|+++|.+......      .....+..+..    ..++++++ 
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHh
Confidence            34567999999999999999999988871     0289999986511100      01123333211    12344566 


Q ss_pred             CCCcEEEEcCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          108 TGMDLVIIPAGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      .++|+||++|+..... ..+..+.+..|+.....+++.+.+..
T Consensus        85 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~  127 (342)
T 2hrz_A           85 ARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIAN  127 (342)
T ss_dssp             TCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             cCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcc
Confidence            5899999999854210 12344567789999999999888765

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=97.77  E-value=0.0001  Score=70.92  Aligned_cols=101  Identities=13%  Similarity=0.162  Sum_probs=68.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-------CCcEEEEEeCCCc-----HHHHHHHhcCC--------CCCeEEEEeCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-------LVSVLHLYDVVNT-----PGVTADISHMD--------TGAVVRGFLGQ  100 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-------~~~el~L~D~~~~-----~~~~~dl~~~~--------~~~~v~~~~~t  100 (353)
                      +|||+|||+ |.+|+.++..|+..|       .  +|.++|+++.     ....+.-.+..        ....+..   +
T Consensus        21 ~~kI~iIGa-G~mG~alA~~L~~~G~~~~~~~~--~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~---~   94 (375)
T 1yj8_A           21 PLKISILGS-GNWASAISKVVGTNAKNNYLFEN--EVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVA---H   94 (375)
T ss_dssp             CBCEEEECC-SHHHHHHHHHHHHHHHHCTTBCS--CEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEE---E
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHcCCccCCCCC--eEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEE---E
Confidence            469999999 999999999998877       5  8999998763     33222111110        0122443   2


Q ss_pred             CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh----hC-CCcEEEEecCCCCc
Q 018618          101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK----CC-PNATVNLISNPVNS  163 (353)
Q Consensus       101 ~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~----~~-p~a~viv~tNPv~~  163 (353)
                      +|+++++++||+||++..                ...+.++++.+..    +. |+.+++..+|.+..
T Consensus        95 ~~~~ea~~~aDvVilav~----------------~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~  146 (375)
T 1yj8_A           95 SDLASVINDADLLIFIVP----------------CQYLESVLASIKESESIKIASHAKAISLTKGFIV  146 (375)
T ss_dssp             SSTHHHHTTCSEEEECCC----------------HHHHHHHHHHHTC---CCCCTTCEEEECCCSCEE
T ss_pred             CCHHHHHcCCCEEEEcCC----------------HHHHHHHHHHHhhhhhccCCCCCEEEEeCCcccc
Confidence            466788999999999852                1246677777776    54 57888888876543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=97.77  E-value=5.9e-05  Score=67.24  Aligned_cols=112  Identities=15%  Similarity=0.139  Sum_probs=71.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhC--CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~--~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~  116 (353)
                      .+++|.|+||+|++|++++..|++.  +.  +|++++++...  ..++.. .. ..+.. .....+++++++++|+||++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~--~V~~~~r~~~~--~~~~~~-~~-~~~~~D~~d~~~~~~~~~~~d~vi~~   76 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF--VAKGLVRSAQG--KEKIGG-EA-DVFIGDITDADSINPAFQGIDALVIL   76 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC--EEEEEESCHHH--HHHTTC-CT-TEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc--EEEEEEcCCCc--hhhcCC-Ce-eEEEecCCCHHHHHHHHcCCCEEEEe
Confidence            3568999999999999999999988  55  99999986421  112211 10 11111 11113456778999999999


Q ss_pred             CCCCCC------------CCC---CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          117 AGVPRK------------PGM---TRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       117 ag~~~~------------~g~---~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +|....            +..   ........|+.....+++.+.+.... .+|++|
T Consensus        77 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~S  132 (253)
T 1xq6_A           77 TSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK-HIVVVG  132 (253)
T ss_dssp             CCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS-EEEEEE
T ss_pred             ccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCC-EEEEEc
Confidence            885421            111   01134678888899999999877544 444443

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.76  E-value=0.00012  Score=67.86  Aligned_cols=97  Identities=11%  Similarity=0.159  Sum_probs=65.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ++||+|||+ |.+|..++..|...|+ ..+|.++|+++...  .++... .  .+..   +++..+++++||+||++.. 
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~--~~l~~~-~--gi~~---~~~~~~~~~~aDvVilav~-   72 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKL--DFFKEK-C--GVHT---TQDNRQGALNADVVVLAVK-   72 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHH--HHHHHT-T--CCEE---ESCHHHHHSSCSEEEECSC-
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHH--HHHHHH-c--CCEE---eCChHHHHhcCCeEEEEeC-
Confidence            479999999 9999999999998885 45899999987221  222221 1  1222   2456788999999999861 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecCCCC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPVN  162 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNPv~  162 (353)
                      |               +.+.++++.+..+  .++.+|+.+++.+.
T Consensus        73 p---------------~~~~~vl~~l~~~~l~~~~iiiS~~agi~  102 (280)
T 3tri_A           73 P---------------HQIKMVCEELKDILSETKILVISLAVGVT  102 (280)
T ss_dssp             G---------------GGHHHHHHHHHHHHHTTTCEEEECCTTCC
T ss_pred             H---------------HHHHHHHHHHHhhccCCCeEEEEecCCCC
Confidence            1               1244556666655  35667766666655

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=97.76  E-value=8.3e-05  Score=70.13  Aligned_cols=92  Identities=18%  Similarity=0.254  Sum_probs=60.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhh-hhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLEN-ALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~-al~~ADiVIi~ag~  119 (353)
                      +||+|||+ |.+|..++..|...|+..+|+++|+++. ...+.++   .  .....   ++++++ ++++||+||++...
T Consensus        34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~---G--~~~~~---~~~~~~~~~~~aDvVilavp~  104 (314)
T 3ggo_A           34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL---G--IIDEG---TTSIAKVEDFSPDFVMLSSPV  104 (314)
T ss_dssp             SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT---T--SCSEE---ESCTTGGGGGCCSEEEECSCG
T ss_pred             CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC---C--Ccchh---cCCHHHHhhccCCEEEEeCCH
Confidence            69999998 9999999999999987668999999762 1122211   1  11111   245567 79999999998521


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                      .                .+.++++.+..+. |+++|+.++
T Consensus       105 ~----------------~~~~vl~~l~~~l~~~~iv~d~~  128 (314)
T 3ggo_A          105 R----------------TFREIAKKLSYILSEDATVTDQG  128 (314)
T ss_dssp             G----------------GHHHHHHHHHHHSCTTCEEEECC
T ss_pred             H----------------HHHHHHHHHhhccCCCcEEEECC
Confidence            1                1234445555554 677666554

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=97.75  E-value=5.9e-05  Score=74.98  Aligned_cols=115  Identities=17%  Similarity=0.202  Sum_probs=70.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhC--CCCcEEEEEeCCCcHHHHHHHhcCC--C-------------CCeEEEEeCCCch
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMD--T-------------GAVVRGFLGQPQL  103 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~--~~~~el~L~D~~~~~~~~~dl~~~~--~-------------~~~v~~~~~t~d~  103 (353)
                      +|||+|||+ |.||..+|..|+..  |+  +|+++|+++.+  +..+....  .             ...++.   ++|+
T Consensus         5 ~mkI~VIG~-G~mG~~lA~~La~~g~G~--~V~~~d~~~~~--~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~---t~~~   76 (467)
T 2q3e_A            5 IKKICCIGA-GYVGGPTCSVIAHMCPEI--RVTVVDVNESR--INAWNSPTLPIYEPGLKEVVESCRGKNLFF---STNI   76 (467)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHHCTTS--EEEEECSCHHH--HHHHTSSSCSSCCTTHHHHHHHHBTTTEEE---ESCH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCCC--EEEEEECCHHH--HHHHhCCCCCcCCCCHHHHHHHhhcCCEEE---ECCH
Confidence            479999998 99999999999987  55  99999997522  12222110  0             012333   3577


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCch
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNST  164 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~  164 (353)
                      ++++++||+||++.+.|........+ -..++..+.+.++.+..+. |+.+|+.. |+|....
T Consensus        77 ~e~~~~aDvViiaVptp~~~~~v~~~-~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~  138 (467)
T 2q3e_A           77 DDAIKEADLVFISVNTPTKTYGMGKG-RAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAA  138 (467)
T ss_dssp             HHHHHHCSEEEECCCCCBCCSSTTTT-TSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHH
T ss_pred             HHHHhcCCEEEEEcCCchhhcccccc-CCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHH
Confidence            78899999999997665432110000 0122334556666666654 45555554 5777653

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=97.75  E-value=8.1e-05  Score=64.91  Aligned_cols=105  Identities=12%  Similarity=0.096  Sum_probs=71.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----CchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~ADiVIi~  116 (353)
                      .|||.|+||+|++|++++..|+..|...+|+++++++..      .+    ..+..+...    .++++++  +|+||.+
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------~~----~~~~~~~~D~~~~~~~~~~~--~d~vi~~   72 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------EH----PRLDNPVGPLAELLPQLDGS--IDTAFCC   72 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------CC----TTEECCBSCHHHHGGGCCSC--CSEEEEC
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------cC----CCceEEeccccCHHHHHHhh--hcEEEEC
Confidence            369999999999999999999998865589999987632      01    122221111    1222333  8999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +|.......+..++...|+.....+++.+.+.... .++++|
T Consensus        73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~S  113 (215)
T 2a35_A           73 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGAR-HYLVVS  113 (215)
T ss_dssp             CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEC
T ss_pred             eeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCC-EEEEEC
Confidence            88643222355667788999999999998876544 344444

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=97.74  E-value=3.8e-05  Score=71.70  Aligned_cols=167  Identities=16%  Similarity=0.118  Sum_probs=94.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CC---chhhhhC--CCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QP---QLENALT--GMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~---d~~~al~--~ADiVI  114 (353)
                      +|||.|+||+|++|++++..|+..|.  +|+++|++..... ..+..     .+..+.. -+   ++.++++  ++|+||
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~-~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~d~vi   72 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGL--SVVVVDNLQTGHE-DAITE-----GAKFYNGDLRDKAFLRDVFTQENIEAVM   72 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCG-GGSCT-----TSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCCCcCch-hhcCC-----CcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence            46999999999999999999999887  8999997641100 11111     1222111 12   2445666  899999


Q ss_pred             EcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHH
Q 018618          115 IPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVV  192 (353)
Q Consensus       115 i~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~  192 (353)
                      ++++.....  ..+..+.+..|+.....+++.+.+.... .+|++|... ....--...+......++...+|.+.....
T Consensus        73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~Ss~~-~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e  150 (330)
T 2c20_A           73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVD-KFIFSSTAA-TYGEVDVDLITEETMTNPTNTYGETKLAIE  150 (330)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEECCGG-GGCSCSSSSBCTTSCCCCSSHHHHHHHHHH
T ss_pred             ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCC-EEEEeCCce-eeCCCCCCCCCcCCCCCCCChHHHHHHHHH
Confidence            998754211  1234566788999999999998876543 444444311 000000000000011223344555555555


Q ss_pred             HHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          193 RANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       193 R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ++-..+++..|++..-++ +.++|..
T Consensus       151 ~~~~~~~~~~~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          151 KMLHWYSQASNLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHHHHHHTSSCEEEEEECSEEECCC
T ss_pred             HHHHHHHHHhCCcEEEEecCcccCCC
Confidence            555556665666544443 4567754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.74  E-value=0.00043  Score=62.87  Aligned_cols=146  Identities=18%  Similarity=0.110  Sum_probs=83.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCch---hhh-------h
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL---ENA-------L  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~a-------l  107 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+.. -+|.   +++       +
T Consensus        29 ~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           29 GQVAVVTGASRGIGAAIARKLGSLGA--RVVLTARDVEKLRAVEREIVAAG--GEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            35799999999999999999999998  899999876  333334444322  23333211 1222   222       2


Q ss_pred             CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|++|..+|.....+    .+   ....+..|+.....+.+.+..+   ...+.||++|......            +
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------~  172 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKN------------P  172 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSC------------C
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcC------------C
Confidence            36899999998632211    22   2345566765555555544322   3456677766543221            2


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHh
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      .+..-.++.+......+-+.+++.+
T Consensus       173 ~~~~~~Y~asKaa~~~l~~~la~e~  197 (262)
T 3rkr_A          173 VADGAAYTASKWGLNGLMTSAAEEL  197 (262)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            2333334444333345566677665

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=97.73  E-value=4.7e-05  Score=70.80  Aligned_cols=158  Identities=16%  Similarity=0.187  Sum_probs=93.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag  118 (353)
                      .|||.|+||+|++|++++..|+..|.  ++++++.+..    .|+.+            ..++.++++  ++|+||++++
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~--~v~~~~r~~~----~D~~d------------~~~~~~~~~~~~~d~vih~a~   64 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGD--VELVLRTRDE----LNLLD------------SRAVHDFFASERIDQVYLAAA   64 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTT--EEEECCCTTT----CCTTC------------HHHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCC--eEEEEecCcc----CCccC------------HHHHHHHHHhcCCCEEEEcCe
Confidence            46999999999999999999999887  7888876421    11111            123456677  9999999988


Q ss_pred             CCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchh---HHHHHHHHHhCCCCC-CceEeechhh
Q 018618          119 VPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTV---PIAAEVFKKAGTYDP-KKLLGVTMLD  190 (353)
Q Consensus       119 ~~~~~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t---~~~~~~~~~~~~~~~-~kviG~t~ld  190 (353)
                      .....   ..+..+.+..|+.....+++.+.+.... .+|.+|.. +..-.   ++ .+-........+ ...+|.+.+.
T Consensus        65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~vyg~~~~~~~-~E~~~~~~~~~p~~~~Y~~sK~~  142 (321)
T 1e6u_A           65 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVN-KLLFLGSSCIYPKLAKQPM-AESELLQGTLEPTNEPYAIAKIA  142 (321)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEECCGGGSCTTCCSSB-CGGGTTSSCCCGGGHHHHHHHHH
T ss_pred             ecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEccHHHcCCCCCCCc-CccccccCCCCCCCCccHHHHHH
Confidence            54211   1234566788999999999999876543 45555432 11000   00 000000000111 1144555555


Q ss_pred             HHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          191 VVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       191 ~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      ..++-..+++..|++..-++ +.++|...
T Consensus       143 ~E~~~~~~~~~~~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          143 GIKLCESYNRQYGRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             HHHHHHHHHHHHCCEEEEEEECEEESTTC
T ss_pred             HHHHHHHHHHHhCCCEEEEEeCCcCCcCC
Confidence            55555556666677655553 56777543

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=97.73  E-value=2.1e-05  Score=72.86  Aligned_cols=166  Identities=14%  Similarity=0.102  Sum_probs=96.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC--CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhC--CCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT--GMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~--~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~--~ADiVIi~  116 (353)
                      |||.|+||+|++|++++..|+..  |.  +|+++|++......  ....   ..+.. .....+++++++  ++|+||++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~~--~~~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~   75 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTE--NVIASDIRKLNTDV--VNSG---PFEVVNALDFNQIEHLVEVHKITDIYLM   75 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGG--GEEEEESCCCSCHH--HHSS---CEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCC--EEEEEcCCCccccc--cCCC---ceEEecCCCHHHHHHHHhhcCCCEEEEC
Confidence            68999999999999999998887  66  88999986622111  1111   11111 001123445676  89999999


Q ss_pred             CCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechhhHHHH
Q 018618          117 AGVPRKP-GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRA  194 (353)
Q Consensus       117 ag~~~~~-g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~  194 (353)
                      ++..... ..+..+....|+.....+++.+.+.... .+|.+|.. +..-..- ...........+...+|.+.+...++
T Consensus        76 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~-~~~~~e~~~~~~~~~Y~~sK~~~e~~  153 (312)
T 2yy7_A           76 AALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIK-KIFWPSSIAVFGPTTP-KENTPQYTIMEPSTVYGISKQAGERW  153 (312)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCS-EEECCEEGGGCCTTSC-SSSBCSSCBCCCCSHHHHHHHHHHHH
T ss_pred             CccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeccHHHhCCCCC-CCCccccCcCCCCchhHHHHHHHHHH
Confidence            8754211 1234566788999999999999876533 44444321 1100000 00000001122334556665555566


Q ss_pred             HHHHHHHhCCCCCCCc-ceEEee
Q 018618          195 NTFVAEVLGLDPRDVD-VPVVGG  216 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v~-~~viG~  216 (353)
                      -..+++..|++..-++ +.++|.
T Consensus       154 ~~~~~~~~~~~~~~lrp~~v~g~  176 (312)
T 2yy7_A          154 CEYYHNIYGVDVRSIRYPGLISW  176 (312)
T ss_dssp             HHHHHHHHCCEEECEEECEEECS
T ss_pred             HHHHHHhcCCcEEEEeCCeEecC
Confidence            6666677787666665 667774

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=97.72  E-value=3.3e-05  Score=71.08  Aligned_cols=99  Identities=15%  Similarity=0.109  Sum_probs=69.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC--CcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG--MDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~--ADiVIi~ag~  119 (353)
                      |||.|+||+|++|++++..|+ .|+  +|+.+|++..      ....+    +.   ...++.+++++  +|+||++++.
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~--~V~~~~r~~~------~~~~D----~~---d~~~~~~~~~~~~~d~vih~a~~   64 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVG--NLIALDVHSK------EFCGD----FS---NPKGVAETVRKLRPDVIVNAAAH   64 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTS--EEEEECTTCS------SSCCC----TT---CHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCC--eEEEeccccc------ccccc----CC---CHHHHHHHHHhcCCCEEEECccc
Confidence            689999999999999999998 776  9999998651      00111    11   01234566766  9999999885


Q ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          120 PRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       120 ~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ...  ...+..+.+..|+.....+++.+.+...  .++.+|
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~S  103 (299)
T 1n2s_A           65 TAVDKAESEPELAQLLNATSVEAIAKAANETGA--WVVHYS  103 (299)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC--EEEEEE
T ss_pred             CCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--cEEEEe
Confidence            431  1234566778999999999999987653  455554

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.72  E-value=0.0002  Score=65.91  Aligned_cols=176  Identities=14%  Similarity=0.094  Sum_probs=94.2

Q ss_pred             CCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE
Q 018618           20 PPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF   97 (353)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~   97 (353)
                      ||--|.++|+.......-.-+.+++.|+||+|.+|..++..|++.|.  +|++.|+++  ......++....  ..+..+
T Consensus        12 ~~~~~~~~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~   87 (275)
T 4imr_A           12 DLGTENLYFQSMRLETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA--HVILHGVKPGSTAAVQQRIIASG--GTAQEL   87 (275)
T ss_dssp             ------CCSCTTSHHHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSTTTTHHHHHHHHHTT--CCEEEE
T ss_pred             CccccccccccccccccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CeEEEE
Confidence            45566677765543332223345789999999999999999999998  899999987  344444454322  222222


Q ss_pred             eC----CCchhhhh------CCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEe
Q 018618           98 LG----QPQLENAL------TGMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLI  157 (353)
Q Consensus        98 ~~----t~d~~~al------~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~  157 (353)
                      ..    ..+.++.+      ...|++|..||.....   ..+.   ...+..|+.....+.+.    +.+. ..+.||++
T Consensus        88 ~~Dv~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~i  166 (275)
T 4imr_A           88 AGDLSEAGAGTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVAR-KWGRVVSI  166 (275)
T ss_dssp             ECCTTSTTHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEE
T ss_pred             EecCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence            11    12222233      3789999999864322   1222   23456666554444444    4443 35667776


Q ss_pred             cCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       158 tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      |......            ..+..-.++.+......+-+.+|..++  +..|++..+
T Consensus       167 sS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  209 (275)
T 4imr_A          167 GSINQLR------------PKSVVTAYAATKAAQHNLIQSQARDFA--GDNVLLNTL  209 (275)
T ss_dssp             CCGGGTS------------CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCHHhCC------------CCCCchhhHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence            5422111            112222244444444556677777774  334444333

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.72  E-value=5.6e-05  Score=69.94  Aligned_cols=65  Identities=8%  Similarity=0.132  Sum_probs=49.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .|||+|||+ |.+|..++..|...|+  +|+++|+++....  .+.+..    +..   .+++++++++||+||++.
T Consensus         1 s~~i~iIG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~--~~~~~g----~~~---~~~~~~~~~~aDvvi~~v   65 (287)
T 3pef_A            1 SQKFGFIGL-GIMGSAMAKNLVKAGC--SVTIWNRSPEKAE--ELAALG----AER---AATPCEVVESCPVTFAML   65 (287)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSGGGGH--HHHHTT----CEE---CSSHHHHHHHCSEEEECC
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCC--eEEEEcCCHHHHH--HHHHCC----Cee---cCCHHHHHhcCCEEEEEc
Confidence            379999999 9999999999999997  9999999862211  122211    222   357788899999999985

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=97.70  E-value=0.00011  Score=65.82  Aligned_cols=103  Identities=19%  Similarity=0.195  Sum_probs=69.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--H-HHHHHhcCCCCCeEEEEeCCCchhhhh----CCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G-VTADISHMDTGAVVRGFLGQPQLENAL----TGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~-~~~dl~~~~~~~~v~~~~~t~d~~~al----~~ADiVI  114 (353)
                      ++|.|+||+|++|++++..|+..|.  +|+++|++...  . ...|+.+.            .++++++    .+.|+||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~D~~~~------------~~~~~~~~~~~~~~d~vi   67 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH--TVIGIDRGQADIEADLSTPGGRE------------TAVAAVLDRCGGVLDGLV   67 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSSSSEECCTTSHHHHH------------HHHHHHHHHHTTCCSEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEeCChhHccccccCCcccH------------HHHHHHHHHcCCCccEEE
Confidence            4799999999999999999999987  89999987511  0 11122211            1233344    3899999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      .++|.... .......+..|+.....+++.+.+.   .....+|++|.
T Consensus        68 ~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS  114 (255)
T 2dkn_A           68 CCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGS  114 (255)
T ss_dssp             ECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECC
T ss_pred             ECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEec
Confidence            99986532 2345667788888887777766654   22355666553

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.70  E-value=6.5e-05  Score=70.49  Aligned_cols=66  Identities=12%  Similarity=0.153  Sum_probs=50.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+|||+|||+ |.+|..++..|+..|+  +|+++|+++....  ++....    +..   .+++++++++||+||++.
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~--~l~~~g----~~~---~~~~~~~~~~aDvvi~~v   85 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGF--KVTVWNRTLSKCD--ELVEHG----ASV---CESPAEVIKKCKYTIAML   85 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSGGGGH--HHHHTT----CEE---CSSHHHHHHHCSEEEECC
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCC--eEEEEeCCHHHHH--HHHHCC----CeE---cCCHHHHHHhCCEEEEEc
Confidence            4679999999 9999999999999998  9999999862221  122211    122   356788899999999985

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=97.69  E-value=0.00019  Score=66.02  Aligned_cols=95  Identities=17%  Similarity=0.233  Sum_probs=60.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC-CCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~-~ADiVIi~ag~~  120 (353)
                      +||+|||+ |.+|..++..|...|+..+|+++|+++....  .+....  .....   +++++++++ +||+||++... 
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~--~~~~~g--~~~~~---~~~~~~~~~~~aDvVilavp~-   72 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESIS--KAVDLG--IIDEG---TTSIAKVEDFSPDFVMLSSPV-   72 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHH--HHHHTT--SCSEE---ESCGGGGGGTCCSEEEECSCH-
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHH--HHHHCC--Ccccc---cCCHHHHhcCCCCEEEEcCCH-
Confidence            59999998 9999999999998876448999998752111  122211  11111   135667888 99999998521 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  160 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  160 (353)
                                 .    ...++++.+..+. |+++|+.++|.
T Consensus        73 -----------~----~~~~v~~~l~~~l~~~~iv~~~~~~   98 (281)
T 2g5c_A           73 -----------R----TFREIAKKLSYILSEDATVTDQGSV   98 (281)
T ss_dssp             -----------H----HHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             -----------H----HHHHHHHHHHhhCCCCcEEEECCCC
Confidence                       1    1224444454443 67777766654

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.69  E-value=4.8e-05  Score=69.82  Aligned_cols=101  Identities=16%  Similarity=0.041  Sum_probs=67.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi~  116 (353)
                      |||.|+||+|++|++++..|... +.  +|++++++....  .++...    .+..+..    ..++.++++++|+||++
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~--~V~~~~R~~~~~--~~~~~~----~v~~~~~D~~d~~~l~~~~~~~d~vi~~   72 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHID--HFHIGVRNVEKV--PDDWRG----KVSVRQLDYFNQESMVEAFKGMDTVVFI   72 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCT--TEEEEESSGGGS--CGGGBT----TBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCC--cEEEEECCHHHH--HHhhhC----CCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence            68999999999999999998886 66  889998865211  112211    1222111    13456789999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ++....        ...|+...+.+++.+++.+..-+|.+.|
T Consensus        73 a~~~~~--------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss  106 (289)
T 3e48_A           73 PSIIHP--------SFKRIPEVENLVYAAKQSGVAHIIFIGY  106 (289)
T ss_dssp             CCCCCS--------HHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CCCCcc--------chhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence            875421        1357788889999998876444443333

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.69  E-value=0.00021  Score=67.27  Aligned_cols=66  Identities=20%  Similarity=0.296  Sum_probs=50.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..|||+|||+ |.+|..++..|+..|+  +|+++|+++.  .+..+....    +..   .+++++++++||+||++.
T Consensus        30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~--~~~~l~~~g----~~~---~~~~~e~~~~aDvVi~~v   95 (320)
T 4dll_A           30 YARKITFLGT-GSMGLPMARRLCEAGY--ALQVWNRTPA--RAASLAALG----ATI---HEQARAAARDADIVVSML   95 (320)
T ss_dssp             CCSEEEEECC-TTTHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHTTT----CEE---ESSHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHhCCC--eEEEEcCCHH--HHHHHHHCC----CEe---eCCHHHHHhcCCEEEEEC
Confidence            4579999999 9999999999999998  9999998752  222333321    222   246788999999999985

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=97.69  E-value=0.00022  Score=68.38  Aligned_cols=175  Identities=17%  Similarity=0.123  Sum_probs=97.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHH-hCCCCcEEEEEeCCCc----------HHHHHH-HhcCCC---CCe---EEEEeCC-C
Q 018618           41 GFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVNT----------PGVTAD-ISHMDT---GAV---VRGFLGQ-P  101 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~-~~~~~~el~L~D~~~~----------~~~~~d-l~~~~~---~~~---v~~~~~t-~  101 (353)
                      .|+|.|+||+|++|++++..|+ ..|.  +|+++|++..          .....+ +.....   ...   +..+... +
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~   79 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNH--SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC--EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCC--EEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCC
Confidence            3799999999999999999999 8887  9999997641          111111 111110   011   3332211 2


Q ss_pred             ---chhhhhC--C-CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhH---HH--
Q 018618          102 ---QLENALT--G-MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP---IA--  168 (353)
Q Consensus       102 ---d~~~al~--~-ADiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~---~~--  168 (353)
                         ++.++++  + +|+||++|+.....  ..+..+++..|+.....+++.+.+.....+|.+.|.-+.....   ..  
T Consensus        80 d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~  159 (397)
T 1gy8_A           80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTN  159 (397)
T ss_dssp             CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----C
T ss_pred             CHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCccccccc
Confidence               2335565  6 99999999854211  1234567788999999999998876544444433321100000   00  


Q ss_pred             HHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          169 AEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       169 ~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ...+.......+...+|.+.....++-..+++.+|++..-++ +.++|.+
T Consensus       160 ~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          160 AEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAH  209 (397)
T ss_dssp             CCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCC
T ss_pred             ccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCC
Confidence            000000001112334555555556666667777777655553 5577754

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=97.67  E-value=7.1e-05  Score=71.38  Aligned_cols=161  Identities=12%  Similarity=0.048  Sum_probs=89.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH---HHHHHHhcCC---CCCeEEEEeCC-C---chhhhhCC--
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMD---TGAVVRGFLGQ-P---QLENALTG--  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~---~~~~dl~~~~---~~~~v~~~~~t-~---d~~~al~~--  109 (353)
                      ++|.|+||+|++|++++..|+..|.  +|+++|++...   ....++....   ....+..+... +   ++.+++++  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  102 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGY--EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVK  102 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCC--EEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcC
Confidence            4899999999999999999999887  99999986511   0111111000   01223332211 2   23345554  


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCC--CcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceE
Q 018618          110 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCP--NATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLL  184 (353)
Q Consensus       110 ADiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p--~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kvi  184 (353)
                      .|+||.++|.....  ..+..+.+..|+.....+++.+.+...  ...+|++|.. +..-..  ...+.......+...+
T Consensus       103 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~--~~~~~E~~~~~~~~~Y  180 (375)
T 1t2a_A          103 PTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQ--EIPQKETTPFYPRSPY  180 (375)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCS--SSSBCTTSCCCCCSHH
T ss_pred             CCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCC--CCCCCccCCCCCCChh
Confidence            59999998854211  123445677899999999999987653  1455555431 100000  0000011112233455


Q ss_pred             eechhhHHHHHHHHHHHhCCCC
Q 018618          185 GVTMLDVVRANTFVAEVLGLDP  206 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~v~~  206 (353)
                      |.+.....++-..+++.++++.
T Consensus       181 ~~sK~~~e~~~~~~~~~~~~~~  202 (375)
T 1t2a_A          181 GAAKLYAYWIVVNFREAYNLFA  202 (375)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEE
T ss_pred             HHHHHHHHHHHHHHHHHhCCCE
Confidence            6655555566666677777653

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=97.67  E-value=4.5e-05  Score=70.13  Aligned_cols=158  Identities=13%  Similarity=0.085  Sum_probs=90.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCC--cEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC--CcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLV--SVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG--MDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~--~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~--ADiVIi  115 (353)
                      .+|||.|+||+|++|++++..|...|..  .+...+..     ...|+.+            ..++.+++++  +|+||+
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~-----~~~D~~d------------~~~~~~~~~~~~~d~Vih   67 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSS-----KDADLTD------------TAQTRALFEKVQPTHVIH   67 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCT-----TTCCTTS------------HHHHHHHHHHSCCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCc-----eecccCC------------HHHHHHHHhhcCCCEEEE
Confidence            4689999999999999999999988751  01110000     0011111            1234566665  999999


Q ss_pred             cCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC------chhHHHHHHHHHhCCCCCCc-eEe
Q 018618          116 PAGVPRK---PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN------STVPIAAEVFKKAGTYDPKK-LLG  185 (353)
Q Consensus       116 ~ag~~~~---~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~------~~t~~~~~~~~~~~~~~~~k-viG  185 (353)
                      +++....   ......+.+..|+.....+++.+++....-+|.+.|--+.      .++    +-........+.. .+|
T Consensus        68 ~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~----E~~~~~~~~~p~~~~Y~  143 (319)
T 4b8w_A           68 LAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPID----ETMIHNGPPHNSNFGYS  143 (319)
T ss_dssp             CCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBC----GGGGGBSCCCSSSHHHH
T ss_pred             CceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCcc----ccccccCCCCCCcchHH
Confidence            9886421   1234566789999999999999988764433333332110      010    0000000111122 255


Q ss_pred             echhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          186 VTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       186 ~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      .+.+...++-..+++..|++..-++ +.++|...
T Consensus       144 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          144 YAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTC
T ss_pred             HHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCC
Confidence            5555556666666777777655553 56777543

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=97.67  E-value=2.7e-05  Score=70.76  Aligned_cols=103  Identities=18%  Similarity=0.189  Sum_probs=72.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi~a  117 (353)
                      +||.|+||+|++|++++..|+..|.  +|+++|++....    +.     ..+..+..    ..++.++++++|+||+++
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~----~~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a   71 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAH--EVRLSDIVDLGA----AE-----AHEEIVACDLADAQAVHDLVKDCDGIIHLG   71 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEE--EEEECCSSCCCC----CC-----TTEEECCCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCC--EEEEEeCCCccc----cC-----CCccEEEccCCCHHHHHHHHcCCCEEEECC
Confidence            4899999999999999999998886  899999875210    00     11222111    123457789999999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +..  ...+....+..|+.....+++.+.+.... .++++|
T Consensus        72 ~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~S  109 (267)
T 3ay3_A           72 GVS--VERPWNDILQANIIGAYNLYEAARNLGKP-RIVFAS  109 (267)
T ss_dssp             SCC--SCCCHHHHHHHTHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             cCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEeC
Confidence            865  22345667788999999999998876433 444443

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=97.67  E-value=7.1e-05  Score=70.39  Aligned_cols=113  Identities=19%  Similarity=0.105  Sum_probs=71.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c-------HHHHHHHhcCCCCCeEEEEeC-CC---chhhhhC-
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T-------PGVTADISHMDTGAVVRGFLG-QP---QLENALT-  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~-------~~~~~dl~~~~~~~~v~~~~~-t~---d~~~al~-  108 (353)
                      |+|.|+||+|++|++++..|+..|.  +|+++|++. .       .....++.... ...+..+.. -+   +++++++ 
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGY--LPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC--CEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHh
Confidence            5899999999999999999999887  899998643 1       11222222100 112222111 12   3445566 


Q ss_pred             -CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          109 -GMDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                       ++|+||++++.....  ..+..+.+..|+.....+++.+.+.... .+|++|
T Consensus        80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~S  131 (348)
T 1ek6_A           80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK-NLVFSS  131 (348)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCC-EEEEEC
Confidence             899999998754211  1234567788999999999998876544 344443

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=97.66  E-value=0.00012  Score=67.65  Aligned_cols=95  Identities=13%  Similarity=0.077  Sum_probs=61.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      +|||+|||+ |.+|..++..|...+...+|+++|+++...  ..+.......  ..   ++++++++++||+||++... 
T Consensus         6 ~~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~--~~~~~~g~~~--~~---~~~~~~~~~~aDvVilavp~-   76 (290)
T 3b1f_A            6 EKTIYIAGL-GLIGASLALGIKRDHPHYKIVGYNRSDRSR--DIALERGIVD--EA---TADFKVFAALADVIILAVPI-   76 (290)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSSHHHH--HHHHHTTSCS--EE---ESCTTTTGGGCSEEEECSCH-
T ss_pred             cceEEEEee-CHHHHHHHHHHHhCCCCcEEEEEcCCHHHH--HHHHHcCCcc--cc---cCCHHHhhcCCCEEEEcCCH-
Confidence            579999998 999999999998775334899999875211  1222211101  22   23556778999999998521 


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhh-C-CCcEEEEecC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKC-C-PNATVNLISN  159 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~-~-p~a~viv~tN  159 (353)
                                     ....++++.+..+ . |+.+|+.++|
T Consensus        77 ---------------~~~~~v~~~l~~~~l~~~~ivi~~~~  102 (290)
T 3b1f_A           77 ---------------KKTIDFIKILADLDLKEDVIITDAGS  102 (290)
T ss_dssp             ---------------HHHHHHHHHHHTSCCCTTCEEECCCS
T ss_pred             ---------------HHHHHHHHHHHhcCCCCCCEEEECCC
Confidence                           1135566667665 4 6676665555

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.66  E-value=0.00054  Score=61.28  Aligned_cols=157  Identities=15%  Similarity=0.052  Sum_probs=85.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------  107 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++...   ..+..+.. -+|   +++++       
T Consensus         6 ~k~vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            6 GKVAIITGGTLGIGLAIATKFVEEGA--KVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999987  899999875  22222233221   22332211 122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|+||..+|.....   ..+   ....+..|+..    .+.+.+.+++....+.|+++|.....            .+
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~------------~~  148 (251)
T 1zk4_A           81 GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGF------------VG  148 (251)
T ss_dssp             SSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGT------------SC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhc------------cC
Confidence            3589999999864321   122   23456677764    44444545443322567766653211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.++..+...+..+++.++
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v  185 (251)
T 1zk4_A          149 DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV  185 (251)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred             CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEE
Confidence            2222334443333334455566655433455554444

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=97.66  E-value=8.9e-05  Score=69.48  Aligned_cols=112  Identities=17%  Similarity=0.148  Sum_probs=69.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC--CCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT--GMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~--~ADiV  113 (353)
                      |||.|+||+|++|++++..|+..|.  +|+++|...  ......++.... ...+..+.. -+|   +.++++  +.|+|
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~--~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~D~v   77 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDHAIDTV   77 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhccCCCEE
Confidence            6899999999999999999999987  899998643  111111221100 011121111 122   334554  58999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 018618          114 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  156 (353)
Q Consensus       114 Ii~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv  156 (353)
                      |++||.....  .....+.+..|+.....+++.+++.....+|.+
T Consensus        78 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~  122 (338)
T 1udb_A           78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFS  122 (338)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             EECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence            9998754211  112345678899999999999887754434333

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=97.65  E-value=5.3e-05  Score=69.28  Aligned_cols=104  Identities=12%  Similarity=0.117  Sum_probs=67.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC--CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~--~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |||.|+||+|++|++++..|+..  |.  +|+.++++.....  ++..... ..+.. +....++.++++++|+||++++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~--~l~~~~~-~~~~~D~~d~~~l~~~~~~~d~vi~~a~   75 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPAS--QIIAIVRNVEKAS--TLADQGV-EVRHGDYNQPESLQKAFAGVSKLLFISG   75 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGG--GEEEEESCTTTTH--HHHHTTC-EEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCC--eEEEEEcCHHHHh--HHhhcCC-eEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence            48999999999999999999887  65  8999998762211  1221110 11111 1011245678899999999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..  .+  .    ..|+.....+++.+++....-+|.+.|
T Consensus        76 ~~--~~--~----~~n~~~~~~l~~a~~~~~~~~~v~~Ss  107 (287)
T 2jl1_A           76 PH--YD--N----TLLIVQHANVVKAARDAGVKHIAYTGY  107 (287)
T ss_dssp             CC--SC--H----HHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             CC--cC--c----hHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            53  11  1    458888889999888765443433333

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=97.65  E-value=0.00073  Score=61.97  Aligned_cols=175  Identities=15%  Similarity=0.166  Sum_probs=89.7

Q ss_pred             CCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEE
Q 018618           19 YPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF   97 (353)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~   97 (353)
                      ||-.++...|++-..  ...-+.+++.|+||+|.+|.+++..|++.|.  +|+++|.++ ....+.++....  ..+..+
T Consensus        11 ~~~~~~~~~~~~m~~--~~~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~   84 (273)
T 3uf0_A           11 VDLGTENLYFQSMTG--PFSLAGRTAVVTGAGSGIGRAIAHGYARAGA--HVLAWGRTDGVKEVADEIADGG--GSAEAV   84 (273)
T ss_dssp             --------------C--TTCCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTHHHHHHHHHHTTT--CEEEEE
T ss_pred             ccccccccchhhccc--ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCHHHHHHHHHHHHhcC--CcEEEE
Confidence            455677777765321  1122345899999999999999999999998  899999654 333444454322  333332


Q ss_pred             e-CCCchh---h------hhCCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEe
Q 018618           98 L-GQPQLE---N------ALTGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLI  157 (353)
Q Consensus        98 ~-~t~d~~---~------al~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~  157 (353)
                      . .-+|.+   +      .+...|++|..||......   .+   ....+..|+.....+.+    .+.+.. .+.||++
T Consensus        85 ~~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~i  163 (273)
T 3uf0_A           85 VADLADLEGAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTI  163 (273)
T ss_dssp             ECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEE
T ss_pred             EecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence            1 112321   1      1237899999998653221   12   23445667655555554    444443 4666666


Q ss_pred             cCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          158 SNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       158 tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      |.....            .+.+..-.++.+......+-+.+|..++  +..|++..+
T Consensus       164 sS~~~~------------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  206 (273)
T 3uf0_A          164 ASMLSF------------QGGRNVAAYAASKHAVVGLTRALASEWA--GRGVGVNAL  206 (273)
T ss_dssp             CCGGGT------------SCCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             cchHhc------------CCCCCChhHHHHHHHHHHHHHHHHHHHh--hcCcEEEEE
Confidence            543211            1233333344444444456677777763  334544433

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=97.64  E-value=5.3e-05  Score=71.65  Aligned_cols=97  Identities=16%  Similarity=0.205  Sum_probs=70.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCC-----CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----CchhhhhCC---
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTG---  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~-----~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~---  109 (353)
                      |||.|+||+|++|++++..|+..|     .  +|+++|++.....   +.    ...+..+...    .++.+++++   
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~--~V~~~~r~~~~~~---~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~   72 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPW--KVYGVARRTRPAW---HE----DNPINYVQCDISDPDDSQAKLSPLTD   72 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSE--EEEEEESSCCCSC---CC----SSCCEEEECCTTSHHHHHHHHTTCTT
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCce--EEEEEeCCCCccc---cc----cCceEEEEeecCCHHHHHHHHhcCCC
Confidence            689999999999999999998887     5  8999998762111   11    1222222111    234567788   


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP  150 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p  150 (353)
                      +|+||++++...   .+..+....|+....++++.+.+.++
T Consensus        73 ~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~  110 (364)
T 2v6g_A           73 VTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPNCP  110 (364)
T ss_dssp             CCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCT
T ss_pred             CCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHhcc
Confidence            999999988652   35667788999999999999998743

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=97.64  E-value=0.00014  Score=68.82  Aligned_cols=96  Identities=20%  Similarity=0.201  Sum_probs=63.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC---CCC----eEEEEeCCCchhhhhCCCcEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD---TGA----VVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~---~~~----~v~~~~~t~d~~~al~~ADiV  113 (353)
                      ++||+|||+ |.+|+.++..|+..|+  +|.++|+++.+..  .+....   ..+    .+..   +++.++ ++++|+|
T Consensus        14 ~~kI~iIG~-G~mG~ala~~L~~~G~--~V~~~~r~~~~~~--~l~~~g~~~~~~~~~~~~~~---~~~~~~-~~~aDvV   84 (335)
T 1z82_A           14 EMRFFVLGA-GSWGTVFAQMLHENGE--EVILWARRKEIVD--LINVSHTSPYVEESKITVRA---TNDLEE-IKKEDIL   84 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHH--HHHHHSCBTTBTTCCCCSEE---ESCGGG-CCTTEEE
T ss_pred             CCcEEEECc-CHHHHHHHHHHHhCCC--eEEEEeCCHHHHH--HHHHhCCcccCCCCeeeEEE---eCCHHH-hcCCCEE
Confidence            579999999 9999999999999987  9999998752222  222110   000    1233   245556 8999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  163 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  163 (353)
                      |++...                ..+.++++.+..  ++..+|.++|.++.
T Consensus        85 il~vk~----------------~~~~~v~~~l~~--~~~~vv~~~nGi~~  116 (335)
T 1z82_A           85 VIAIPV----------------QYIREHLLRLPV--KPSMVLNLSKGIEI  116 (335)
T ss_dssp             EECSCG----------------GGHHHHHTTCSS--CCSEEEECCCCCCT
T ss_pred             EEECCH----------------HHHHHHHHHhCc--CCCEEEEEeCCCCC
Confidence            998531                114445554544  77888888887653

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.64  E-value=0.00015  Score=67.62  Aligned_cols=91  Identities=20%  Similarity=0.294  Sum_probs=60.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .+||+|||+ |.+|..++..|+..|+  +|+++|+++....  .+....    +..   +++++++++ ||+||++...+
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~--~V~~~dr~~~~~~--~~~~~g----~~~---~~~~~~~~~-aDvvi~~vp~~   81 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPG--GVTVYDIRIEAMT--PLAEAG----ATL---ADSVADVAA-ADLIHITVLDD   81 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTT--CEEEECSSTTTSH--HHHHTT----CEE---CSSHHHHTT-SSEEEECCSSH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCC--eEEEEeCCHHHHH--HHHHCC----CEE---cCCHHHHHh-CCEEEEECCCh
Confidence            369999998 9999999999999987  8999999872211  122111    222   357778888 99999985311


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                                     ..++++++.+.... |+.+|+..|+
T Consensus        82 ---------------~~~~~v~~~l~~~l~~g~ivv~~st  106 (296)
T 3qha_A           82 ---------------AQVREVVGELAGHAKPGTVIAIHST  106 (296)
T ss_dssp             ---------------HHHHHHHHHHHTTCCTTCEEEECSC
T ss_pred             ---------------HHHHHHHHHHHHhcCCCCEEEEeCC
Confidence                           12344446666554 5666665553

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=97.64  E-value=0.00026  Score=66.61  Aligned_cols=104  Identities=18%  Similarity=0.171  Sum_probs=65.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC---CCCCeEEE-EeCCCchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM---DTGAVVRG-FLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~---~~~~~v~~-~~~t~d~~~al~~ADiVIi~  116 (353)
                      ++||+|||+ |.+|..++..|...|.  +|.++ .++.......-...   ........ ...++|. ++++++|+||++
T Consensus        19 ~~kI~IiGa-Ga~G~~~a~~L~~~G~--~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~D~vila   93 (318)
T 3hwr_A           19 GMKVAIMGA-GAVGCYYGGMLARAGH--EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDP-SAVQGADLVLFC   93 (318)
T ss_dssp             -CEEEEESC-SHHHHHHHHHHHHTTC--EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCG-GGGTTCSEEEEC
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCC--eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCH-HHcCCCCEEEEE
Confidence            469999999 9999999999999987  89999 65421111110110   00011111 1112455 457999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchh
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV  165 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t  165 (353)
                      ....                .+.++++.+..+. |+.+|+.++|..+...
T Consensus        94 vk~~----------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~  127 (318)
T 3hwr_A           94 VKST----------------DTQSAALAMKPALAKSALVLSLQNGVENAD  127 (318)
T ss_dssp             CCGG----------------GHHHHHHHHTTTSCTTCEEEEECSSSSHHH
T ss_pred             cccc----------------cHHHHHHHHHHhcCCCCEEEEeCCCCCcHH
Confidence            5211                1356667777665 6788888899988653

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=97.64  E-value=0.00015  Score=66.09  Aligned_cols=94  Identities=14%  Similarity=0.195  Sum_probs=62.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcE-EEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~e-l~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      +|||+|||+ |.+|..++..|...|+  + +.++|+++...  ..+....   .+...   ++++++++++|+||++.. 
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~--~~v~~~~~~~~~~--~~~~~~~---g~~~~---~~~~~~~~~~Dvvi~av~-   77 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGF--RIVQVYSRTEESA--RELAQKV---EAEYT---TDLAEVNPYAKLYIVSLK-   77 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSSHHHH--HHHHHHT---TCEEE---SCGGGSCSCCSEEEECCC-
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCC--eEEEEEeCCHHHH--HHHHHHc---CCcee---CCHHHHhcCCCEEEEecC-
Confidence            479999999 9999999999988886  5 88999875221  1222110   12222   456678899999999852 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  161 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  161 (353)
                                  ..   .+.++++.+.... ++.+|+..++-.
T Consensus        78 ------------~~---~~~~v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           78 ------------DS---AFAELLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             ------------HH---HHHHHHHHHHTTCCTTCEEEECCTTS
T ss_pred             ------------HH---HHHHHHHHHHhhcCCCcEEEECCCCC
Confidence                        11   1356666776665 677777776643

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=97.63  E-value=0.00024  Score=63.44  Aligned_cols=157  Identities=14%  Similarity=0.175  Sum_probs=81.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEe-CCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC-----
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT-----  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D-~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~-----  108 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++| .++  ......++....  ..+..+.. -+|   .+++++     
T Consensus         5 ~~~vlItGasggiG~~~a~~l~~~G~--~V~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T 2hq1_A            5 GKTAIVTGSSRGLGKAIAWKLGNMGA--NIVLNGSPASTSLDATAEEFKAAG--INVVVAKGDVKNPEDVENMVKTAMDA   80 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECTTCSHHHHHHHHHHHTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCcCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999999997  899984 444  222333343321  22332211 123   222332     


Q ss_pred             --CCcEEEEcCCCCCCC------CCCHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 --GMDLVIIPAGVPRKP------GMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 --~ADiVIi~ag~~~~~------g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                        +.|+||..+|.....      ..+....+..|+.....+.+.+..+   .+.+.+|++|......            +
T Consensus        81 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~------------~  148 (247)
T 2hq1_A           81 FGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGII------------G  148 (247)
T ss_dssp             HSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC------------------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcc------------C
Confidence              799999999864311      1223455677777655555544432   1346677766543211            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+......+-+.+++.++  +..+++.++.
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~  184 (247)
T 2hq1_A          149 NAGQANYAASKAGLIGFTKSIAKEFA--AKGIYCNAVA  184 (247)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CCCCcHhHHHHHHHHHHHHHHHHHHH--HcCcEEEEEE
Confidence            22233344444444456666777663  3345555554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=97.63  E-value=0.00031  Score=63.54  Aligned_cols=154  Identities=15%  Similarity=0.153  Sum_probs=88.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC-------CC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ---LENALT-------GM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~-------~A  110 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.......++....  ..+..+.. -+|   .+++++       +.
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            5 KTALVTGSTSGIGLGIAQVLARAGA--NIVLNGFGDPAPALAEIARHG--VKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHHHTTS--CCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHhcC--CceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5799999999999999999999997  899999876433333444321  22332211 122   333444       89


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..+|.....   ..+   ....+..|+.    ..+.+.+.+++.. .+.||++|......            +.|.
T Consensus        81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------~~~~  147 (255)
T 2q2v_A           81 DILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLV------------GSTG  147 (255)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS------------CCTT
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhcc------------CCCC
Confidence            9999999865321   112   2345566766    5566666665543 45666666432111            1222


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .-.++.+......+-+.+++.+.  +..|++.++
T Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  179 (255)
T 2q2v_A          148 KAAYVAAKHGVVGLTKVVGLETA--TSNVTCNAI  179 (255)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHTT--TSSEEEEEE
T ss_pred             chhHHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence            22334443334456677777764  444544444

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=97.63  E-value=6.9e-05  Score=69.17  Aligned_cols=107  Identities=15%  Similarity=0.065  Sum_probs=68.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHHHHHhcCCCCCeE-EE-EeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVV-RG-FLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v-~~-~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +++|.|+||+|++|++++..|+..| .  +|++++++.......++....  ..+ .. +....++.++++++|+||+++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~--~V~~~~R~~~~~~~~~l~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi~~a   80 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF--KVRVVTRNPRKKAAKELRLQG--AEVVQGDQDDQVIMELALNGAYATFIVT   80 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS--EEEEEESCTTSHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc--eEEEEEcCCCCHHHHHHHHCC--CEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence            3589999999999999999998876 6  899999876322222333221  111 11 101124567889999999987


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +.....      ....|+...+.+++.+++.... .++..|
T Consensus        81 ~~~~~~------~~~~~~~~~~~~~~aa~~~gv~-~iv~~S  114 (299)
T 2wm3_A           81 NYWESC------SQEQEVKQGKLLADLARRLGLH-YVVYSG  114 (299)
T ss_dssp             CHHHHT------CHHHHHHHHHHHHHHHHHHTCS-EEEECC
T ss_pred             CCCccc------cchHHHHHHHHHHHHHHHcCCC-EEEEEc
Confidence            632110      1245677788888888876543 344433

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=97.62  E-value=9.9e-05  Score=69.64  Aligned_cols=119  Identities=14%  Similarity=0.191  Sum_probs=73.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+|||+|||+ |.+|..++..|...|.  ..+|.++|+++.......+...  +  +...   ++..+++++||+||++.
T Consensus        21 ~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~--G--~~~~---~~~~e~~~~aDvVilav   92 (322)
T 2izz_A           21 QSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKM--G--VKLT---PHNKETVQHSDVLFLAV   92 (322)
T ss_dssp             -CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHH--T--CEEE---SCHHHHHHHCSEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHc--C--CEEe---CChHHHhccCCEEEEEe
Confidence            3579999999 9999999999998883  1389999987531122223221  1  2221   35567889999999986


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      . +   .            .+.++++.+..+. |+.+|+.++|.+..- .+ .+.+..  .++..++++.
T Consensus        93 ~-~---~------------~~~~vl~~l~~~l~~~~ivvs~s~gi~~~-~l-~~~l~~--~~~~~~vv~~  142 (322)
T 2izz_A           93 K-P---H------------IIPFILDEIGADIEDRHIVVSCAAGVTIS-SI-EKKLSA--FRPAPRVIRC  142 (322)
T ss_dssp             C-G---G------------GHHHHHHHHGGGCCTTCEEEECCTTCCHH-HH-HHHHHT--TSSCCEEEEE
T ss_pred             C-H---H------------HHHHHHHHHHhhcCCCCEEEEeCCCCCHH-HH-HHHHhh--cCCCCeEEEE
Confidence            3 1   1            2445556666554 677887778877632 22 222222  1344567655

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.62  E-value=0.00034  Score=63.62  Aligned_cols=115  Identities=16%  Similarity=0.088  Sum_probs=71.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++..  .....++........+..+. .-+|.   ++++       .
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            8 KVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999997  8999998752  22223343221112233321 11232   2233       3


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHHhhC--CCcEEEEecCC
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAG----IVRTLCEGIAKCC--PNATVNLISNP  160 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~----i~~~i~~~i~~~~--p~a~viv~tNP  160 (353)
                      ..|++|..+|...  ..+....+..|+.    ..+.+.+.+.+..  +.+.||++|..
T Consensus        86 ~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  141 (267)
T 2gdz_A           86 RLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  141 (267)
T ss_dssp             CCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence            5799999998652  2345556667765    5566666666543  24677777653

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.62  E-value=0.00068  Score=62.11  Aligned_cols=173  Identities=17%  Similarity=0.241  Sum_probs=95.8

Q ss_pred             ccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-
Q 018618           23 LQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-   98 (353)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-   98 (353)
                      .++.+|++-... . .-+.+++.|+||+|.+|.+++..|++.|.  +|++.|.+.   ......++....  ..+..+. 
T Consensus        15 ~~~~~~~~mm~~-~-~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~   88 (271)
T 3v2g_A           15 TENLYFQSMMTS-I-SLAGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQAG--GRAVAIRA   88 (271)
T ss_dssp             -----CHHHHTT-T-CCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEEC
T ss_pred             ccccchhhhccc-c-CCCCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEC
Confidence            455566654321 1 12345899999999999999999999998  899998765   223333444322  2222221 


Q ss_pred             CCCc---hhhhhC-------CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 018618           99 GQPQ---LENALT-------GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  161 (353)
Q Consensus        99 ~t~d---~~~al~-------~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  161 (353)
                      .-+|   .+++++       ..|++|..||......   .+   ....+..|+.....+++.+..+- +.+.||+++...
T Consensus        89 Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~  168 (271)
T 3v2g_A           89 DNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNL  168 (271)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGG
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChh
Confidence            1123   223333       7899999998653221   22   33456778777777777766553 356777765532


Q ss_pred             CchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          162 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       162 ~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ...           ..+|..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       169 ~~~-----------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gIrvn~v  208 (271)
T 3v2g_A          169 AEL-----------VPWPGISLYSASKAALAGLTKGLARDLG--PRGITVNIV  208 (271)
T ss_dssp             GTC-----------CCSTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             hcc-----------CCCCCchHHHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence            211           1123333445544444556677777774  334544333

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.61  E-value=0.00015  Score=65.17  Aligned_cols=156  Identities=16%  Similarity=0.142  Sum_probs=88.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------  108 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+.. -+|   ++++++      
T Consensus        11 ~~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   86 (255)
T 1fmc_A           11 GKCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKL   86 (255)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            35899999999999999999999987  899999876  222333443221  22222211 122   233333      


Q ss_pred             -CCcEEEEcCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 -GMDLVIIPAGVPRKP--GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~--g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                       +.|+||..+|.....  ..+   ....+..|+.....+.+.+.    +. ..+.|+++|.....            .+.
T Consensus        87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~~------------~~~  153 (255)
T 1fmc_A           87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMAAE------------NKN  153 (255)
T ss_dssp             SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------CCC
T ss_pred             CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcchhhc------------CCC
Confidence             899999999864321  222   23455677776555555543    33 34566666542211            122


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ++.-.++.+......+-+.+++.++  +..+++.++.
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~~~~~~~--~~~i~v~~v~  188 (255)
T 1fmc_A          154 INMTSYASSKAAASHLVRNMAFDLG--EKNIRVNGIA  188 (255)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEEE
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHhh--hcCcEEEEEe
Confidence            3333445544444456666776663  3345544444

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.60  E-value=0.00026  Score=65.36  Aligned_cols=92  Identities=18%  Similarity=0.292  Sum_probs=62.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||+|||++|.+|..++..|...|+  +|+++|+++..  ...+....    +..    .+..+++++||+||++..   
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~--~V~~~~r~~~~--~~~~~~~g----~~~----~~~~~~~~~aDvVi~av~---   76 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAH--HLAAIEIAPEG--RDRLQGMG----IPL----TDGDGWIDEADVVVLALP---   76 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSS--EEEEECCSHHH--HHHHHHTT----CCC----CCSSGGGGTCSEEEECSC---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCHHH--HHHHHhcC----CCc----CCHHHHhcCCCEEEEcCC---
Confidence            6999999879999999999999887  99999987521  11222211    111    134577899999999852   


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  161 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  161 (353)
                                .   ..+.++++.+..+. |+.+|+..|+..
T Consensus        77 ----------~---~~~~~v~~~l~~~l~~~~ivv~~s~~~  104 (286)
T 3c24_A           77 ----------D---NIIEKVAEDIVPRVRPGTIVLILDAAA  104 (286)
T ss_dssp             ----------H---HHHHHHHHHHGGGSCTTCEEEESCSHH
T ss_pred             ----------c---hHHHHHHHHHHHhCCCCCEEEECCCCc
Confidence                      1   11456667776655 577766655543

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=97.60  E-value=0.00025  Score=66.61  Aligned_cols=98  Identities=24%  Similarity=0.298  Sum_probs=63.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC--CCcHHHHHHHhcCCC----C---CeEEEEeCCCchhhhhCCCcE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV--VNTPGVTADISHMDT----G---AVVRGFLGQPQLENALTGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~--~~~~~~~~dl~~~~~----~---~~v~~~~~t~d~~~al~~ADi  112 (353)
                      |||+|||+ |.+|+.++..|...|+  +|.++|+  ++.  ....+.....    .   ..+... ...++.++++++|+
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~--~V~~~~r~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~D~   74 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGN--EVRIWGTEFDTE--ILKSISAGREHPRLGVKLNGVEIF-WPEQLEKCLENAEV   74 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC--EEEEECCGGGHH--HHHHHHTTCCBTTTTBCCCSEEEE-CGGGHHHHHTTCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEEccCCHH--HHHHHHHhCcCcccCccccceEEe-cHHhHHHHHhcCCE
Confidence            69999999 9999999999998887  9999998  542  2222332210    0   112322 11166678899999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          113 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       113 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      ||++....                .+.++++.+....|+.+|+.++|.+
T Consensus        75 vi~~v~~~----------------~~~~v~~~i~~l~~~~~vv~~~ng~  107 (335)
T 1txg_A           75 VLLGVSTD----------------GVLPVMSRILPYLKDQYIVLISKGL  107 (335)
T ss_dssp             EEECSCGG----------------GHHHHHHHHTTTCCSCEEEECCCSE
T ss_pred             EEEcCChH----------------HHHHHHHHHhcCCCCCEEEEEcCcC
Confidence            99985321                1334445555433677788788776

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=97.59  E-value=7.6e-05  Score=68.50  Aligned_cols=99  Identities=17%  Similarity=0.245  Sum_probs=64.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC-CCCe--EEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-TGAV--VRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~-~~~~--v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |||+|||+ |.+|+.++..|...|+  +|.++|+++....  ++.... ....  ....  .++ .++++++|+||++..
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~r~~~~~~--~l~~~~~~~~~~~~~~~--~~~-~~~~~~~d~vi~~v~   72 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGH--EVQGWLRVPQPYC--SVNLVETDGSIFNESLT--AND-PDFLATSDLLLVTLK   72 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSEE--EEEEECTTSCEEEEEEE--ESC-HHHHHTCSEEEECSC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCC--CEEEEEcCcccee--eEEEEcCCCceeeeeee--ecC-ccccCCCCEEEEEec
Confidence            69999999 9999999999999988  9999998762110  121110 0111  1221  134 467899999999863


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCch
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  164 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~  164 (353)
                      ...                +.++++.+..+. |+.+|+..+|..+..
T Consensus        73 ~~~----------------~~~v~~~l~~~l~~~~~vv~~~~g~~~~  103 (291)
T 1ks9_A           73 AWQ----------------VSDAVKSLASTLPVTTPILLIHNGMGTI  103 (291)
T ss_dssp             GGG----------------HHHHHHHHHTTSCTTSCEEEECSSSCTT
T ss_pred             HHh----------------HHHHHHHHHhhCCCCCEEEEecCCCCcH
Confidence            210                345556666554 677888888887654

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.57  E-value=8.5e-05  Score=68.71  Aligned_cols=65  Identities=14%  Similarity=0.180  Sum_probs=48.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ++||+|||+ |.+|..++..|+..|+  +|+++|+++.....  +....    +..   .+++++++++||+||++.
T Consensus         1 M~~I~iiG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~~~~--~~~~g----~~~---~~~~~~~~~~advvi~~v   65 (287)
T 3pdu_A            1 MTTYGFLGL-GIMGGPMAANLVRAGF--DVTVWNRNPAKCAP--LVALG----ARQ---ASSPAEVCAACDITIAML   65 (287)
T ss_dssp             CCCEEEECC-STTHHHHHHHHHHHTC--CEEEECSSGGGGHH--HHHHT----CEE---CSCHHHHHHHCSEEEECC
T ss_pred             CCeEEEEcc-CHHHHHHHHHHHHCCC--eEEEEcCCHHHHHH--HHHCC----Cee---cCCHHHHHHcCCEEEEEc
Confidence            369999998 9999999999998887  89999998622111  11111    122   356788899999999985

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=97.57  E-value=6.3e-05  Score=69.77  Aligned_cols=163  Identities=15%  Similarity=0.188  Sum_probs=92.4

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhC--CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhC--CCcEEEEcC
Q 018618           43 KVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT--GMDLVIIPA  117 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~--~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~--~ADiVIi~a  117 (353)
                      ||.|+||+|++|++++..|+..  +.  +|+++|++.....     ..   ..+.. .....++.++++  ++|+||+++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~-----~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~a   70 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKK--NVIASDIVQRDTG-----GI---KFITLDVSNRDEIDRAVEKYSIDAIFHLA   70 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGG--GEEEEESSCCCCT-----TC---CEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCC--EEEEecCCCcccc-----Cc---eEEEecCCCHHHHHHHHhhcCCcEEEECC
Confidence            6899999999999999988876  55  8899987652100     10   11111 000123445666  899999998


Q ss_pred             CCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHH
Q 018618          118 GVPRKPG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANT  196 (353)
Q Consensus       118 g~~~~~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~  196 (353)
                      +...... .+..+.+..|+.....+++.+.+....-+|.+.|.-+..-..- ........-..+...+|.+.....++-.
T Consensus        71 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~-~~~~~e~~~~~p~~~Y~~sK~~~e~~~~  149 (317)
T 3ajr_A           71 GILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETP-KNKVPSITITRPRTMFGVTKIAAELLGQ  149 (317)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSC-SSSBCSSSCCCCCSHHHHHHHHHHHHHH
T ss_pred             cccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCC-CCCccccccCCCCchHHHHHHHHHHHHH
Confidence            7542111 2345567889999999999998765443333333211110000 0000000111233455666555556656


Q ss_pred             HHHHHhCCCCCCCc-ceEEee
Q 018618          197 FVAEVLGLDPRDVD-VPVVGG  216 (353)
Q Consensus       197 ~lA~~l~v~~~~v~-~~viG~  216 (353)
                      .+++..|++..-++ ..++|.
T Consensus       150 ~~~~~~~~~~~~lR~~~~~g~  170 (317)
T 3ajr_A          150 YYYEKFGLDVRSLRYPGIISY  170 (317)
T ss_dssp             HHHHHHCCEEEEEEECEEECS
T ss_pred             HHHHhcCCeEEEEecCcEecc
Confidence            66677777655554 566774

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=97.57  E-value=0.0003  Score=63.37  Aligned_cols=114  Identities=16%  Similarity=0.185  Sum_probs=69.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~-------  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+.. -+|   .+++++       
T Consensus        14 k~vlItGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           14 RVAIVTGGAQNIGLACVTALAEAGA--RVIIADLDEAMATKAVEDLRMEG--HDVSSVVMDVTNTESVQNAVRSVHEQEG   89 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999987  999999875  222333443321  22332211 122   223333       


Q ss_pred             CCcEEEEcCCCCC-C-C--CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPR-K-P--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~-~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      +.|+||+.+|... . +  ..+   ....+..|+.....+++.+..+   ...+.+++++.
T Consensus        90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS  150 (260)
T 3awd_A           90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGS  150 (260)
T ss_dssp             CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEec
Confidence            7899999998643 1 1  122   2345566776666665555432   13456666654

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=97.57  E-value=7.6e-05  Score=70.05  Aligned_cols=114  Identities=16%  Similarity=0.198  Sum_probs=71.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC-----CCCeEEE--EeCCCchhhhhCCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-----TGAVVRG--FLGQPQLENALTGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~-----~~~~v~~--~~~t~d~~~al~~ADiVI  114 (353)
                      |||+|||+ |.+|..++..|.+.|.  +|.++|+++.    ..+....     .......  ...+++. +++.++|+||
T Consensus         3 mkI~IiGa-GaiG~~~a~~L~~~g~--~V~~~~r~~~----~~i~~~g~~~~~~~g~~~~~~~~~~~~~-~~~~~~D~vi   74 (312)
T 3hn2_A            3 LRIAIVGA-GALGLYYGALLQRSGE--DVHFLLRRDY----EAIAGNGLKVFSINGDFTLPHVKGYRAP-EEIGPMDLVL   74 (312)
T ss_dssp             -CEEEECC-STTHHHHHHHHHHTSC--CEEEECSTTH----HHHHHTCEEEEETTCCEEESCCCEESCH-HHHCCCSEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC--eEEEEEcCcH----HHHHhCCCEEEcCCCeEEEeeceeecCH-HHcCCCCEEE
Confidence            69999999 9999999999999887  8999998752    1122111     0011111  0112454 4578999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      ++....    .            +.++++.++.+- |+..|+.+.|-++....+     .+.  +|..++++.
T Consensus        75 lavk~~----~------------~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l-----~~~--~~~~~v~~~  124 (312)
T 3hn2_A           75 VGLKTF----A------------NSRYEELIRPLVEEGTQILTLQNGLGNEEAL-----ATL--FGAERIIGG  124 (312)
T ss_dssp             ECCCGG----G------------GGGHHHHHGGGCCTTCEEEECCSSSSHHHHH-----HHH--TCGGGEEEE
T ss_pred             EecCCC----C------------cHHHHHHHHhhcCCCCEEEEecCCCCcHHHH-----HHH--CCCCcEEEE
Confidence            985311    1            234556666554 678888888988755332     232  566677654

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.56  E-value=0.0002  Score=57.99  Aligned_cols=72  Identities=22%  Similarity=0.232  Sum_probs=45.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCch---h-hhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---E-NALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~---~-~al~~ADiVIi  115 (353)
                      ..|||+|+|+ |.+|+.++..|...|.  +++++|.++..  ...+.... ..... ....++.   . ..++++|+||+
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~--~v~~~d~~~~~--~~~~~~~~-~~~~~-~~d~~~~~~l~~~~~~~~d~vi~   75 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKGH--DIVLIDIDKDI--CKKASAEI-DALVI-NGDCTKIKTLEDAGIEDADMYIA   75 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHHHHC-SSEEE-ESCTTSHHHHHHTTTTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHH--HHHHHHhc-CcEEE-EcCCCCHHHHHHcCcccCCEEEE
Confidence            4579999998 9999999999998886  89999987521  11222110 11111 1111222   1 23689999999


Q ss_pred             cCC
Q 018618          116 PAG  118 (353)
Q Consensus       116 ~ag  118 (353)
                      +.+
T Consensus        76 ~~~   78 (140)
T 1lss_A           76 VTG   78 (140)
T ss_dssp             CCS
T ss_pred             eeC
Confidence            853

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.56  E-value=0.00011  Score=68.69  Aligned_cols=66  Identities=20%  Similarity=0.156  Sum_probs=48.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +|||+|||+ |.+|..++..|...|+  +|+++|+++..  +..+....  ... .   .+++++++++||+||++.
T Consensus         7 ~~~I~iIG~-G~mG~~~a~~l~~~G~--~V~~~dr~~~~--~~~~~~~g--~~~-~---~~~~~e~~~~aDvvi~~v   72 (303)
T 3g0o_A            7 DFHVGIVGL-GSMGMGAARSCLRAGL--STWGADLNPQA--CANLLAEG--ACG-A---AASAREFAGVVDALVILV   72 (303)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHHTT--CSE-E---ESSSTTTTTTCSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHcC--Ccc-c---cCCHHHHHhcCCEEEEEC
Confidence            479999999 9999999999999998  99999987522  22233221  111 1   135578889999999985

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=97.55  E-value=0.00047  Score=62.02  Aligned_cols=151  Identities=15%  Similarity=0.186  Sum_probs=86.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+. .-+|   .++.+       .
T Consensus        10 k~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A           10 KVGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEFG   85 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999998  899999876  233334443321  2333221 1122   22222       3


Q ss_pred             CCcEEEEcCCCCC--C----CCCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          109 GMDLVIIPAGVPR--K----PGMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       109 ~ADiVIi~ag~~~--~----~g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      ..|++|..+|...  .    ...+   ....+..|+..    .+.+.+.+.+.. .+.|+++|.....            
T Consensus        86 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------------  152 (253)
T 3qiv_A           86 GIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW------------  152 (253)
T ss_dssp             CCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC----------------
T ss_pred             CCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc------------
Confidence            8899999998631  1    1122   23456677766    555666665543 5666766653321            


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                         +....++.+......+-+.+++.++  +..|++..+
T Consensus       153 ---~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v  186 (253)
T 3qiv_A          153 ---LYSNYYGLAKVGINGLTQQLSRELG--GRNIRINAI  186 (253)
T ss_dssp             ----------CCHHHHHHHHHHHHHHTT--TTTEEEEEE
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHHHh--hcCeEEEEE
Confidence               2223466765555667788888874  334544333

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.55  E-value=0.00032  Score=62.53  Aligned_cols=146  Identities=19%  Similarity=0.154  Sum_probs=81.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhhhhC---CCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENALT---GMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~al~---~ADiVI  114 (353)
                      .++|.|+||+|.+|++++..|++.|.  +|+++|++....... ..+.. ....... .-+|   ++++++   ..|+||
T Consensus         7 ~~~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~-~~~~~-~~~~~~~-D~~~~~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            7 GLRALVTGAGKGIGRDTVKALHASGA--KVVAVTRTNSDLVSL-AKECP-GIEPVCV-DLGDWDATEKALGGIGPVDLLV   81 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHH-HHHST-TCEEEEC-CTTCHHHHHHHHTTCCCCSEEE
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHH-HHhcc-CCCcEEe-cCCCHHHHHHHHHHcCCCCEEE
Confidence            45899999999999999999999997  899999875211111 11111 1111111 1122   334444   479999


Q ss_pred             EcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHh----hCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceE
Q 018618          115 IPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL  184 (353)
Q Consensus       115 i~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kvi  184 (353)
                      ..+|.....   ..+   ....+..|+.....+.+.+..    ....+.+|++|.....            .+.+..-.+
T Consensus        82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~~~Y  149 (244)
T 1cyd_A           82 NNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAH------------VTFPNLITY  149 (244)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------------SCCTTBHHH
T ss_pred             ECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhc------------CCCCCcchh
Confidence            999864321   112   234556677765555555443    3324666666653211            122333344


Q ss_pred             eechhhHHHHHHHHHHHhC
Q 018618          185 GVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~  203 (353)
                      +.+......+-+.+++.++
T Consensus       150 ~~sK~a~~~~~~~~a~~~~  168 (244)
T 1cyd_A          150 SSTKGAMTMLTKAMAMELG  168 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            5544444556666777653

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.54  E-value=0.00012  Score=66.39  Aligned_cols=143  Identities=15%  Similarity=0.140  Sum_probs=82.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++..     .+..+. .-+|   .+++++       
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~g   81 (259)
T 4e6p_A            9 KSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEIGP-----AAYAVQMDVTRQDSIDAAIAATVEHAG   81 (259)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCT-----TEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhCC-----CceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999998  899999876  2222333321     112111 1122   223333       


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHH----HHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      +.|++|..+|......   .+   ....+..|+.....    ..+.+.+..+.+.|+++|.....            .+.
T Consensus        82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~  149 (259)
T 4e6p_A           82 GLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGR------------RGE  149 (259)
T ss_dssp             SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------------SCC
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhc------------cCC
Confidence            8999999998643211   12   23445567654444    44444444446777777653221            122


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhC
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +..-.++.+......+-+.+|..++
T Consensus       150 ~~~~~Y~asK~a~~~~~~~la~e~~  174 (259)
T 4e6p_A          150 ALVAIYCATKAAVISLTQSAGLDLI  174 (259)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHhh
Confidence            3333344444444456677777763

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=97.53  E-value=9.7e-05  Score=70.04  Aligned_cols=99  Identities=20%  Similarity=0.253  Sum_probs=65.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC-----CCeEEE-EeCCCchhhhhCCCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT-----GAVVRG-FLGQPQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~-----~~~v~~-~~~t~d~~~al~~ADiVI  114 (353)
                      .|||+|||+ |.+|..++..|...|.  +|.++|+++   ....+.....     ...... ...++|.+ ++.++|+||
T Consensus         3 ~mkI~IiGa-G~~G~~~a~~L~~~g~--~V~~~~r~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~D~Vi   75 (335)
T 3ghy_A            3 LTRICIVGA-GAVGGYLGARLALAGE--AINVLARGA---TLQALQTAGLRLTEDGATHTLPVRATHDAA-ALGEQDVVI   75 (335)
T ss_dssp             CCCEEEESC-CHHHHHHHHHHHHTTC--CEEEECCHH---HHHHHHHTCEEEEETTEEEEECCEEESCHH-HHCCCSEEE
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHCCC--EEEEEEChH---HHHHHHHCCCEEecCCCeEEEeeeEECCHH-HcCCCCEEE
Confidence            579999999 9999999999999987  899999742   1222222110     000000 11124654 479999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      ++...                ..+.++++.+..+. |+..|+.++|.+.
T Consensus        76 lavk~----------------~~~~~~~~~l~~~l~~~~~iv~~~nGi~  108 (335)
T 3ghy_A           76 VAVKA----------------PALESVAAGIAPLIGPGTCVVVAMNGVP  108 (335)
T ss_dssp             ECCCH----------------HHHHHHHGGGSSSCCTTCEEEECCSSSC
T ss_pred             EeCCc----------------hhHHHHHHHHHhhCCCCCEEEEECCCCc
Confidence            98521                12456667776654 6888888899953

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=97.53  E-value=0.0001  Score=68.56  Aligned_cols=94  Identities=16%  Similarity=0.171  Sum_probs=59.3

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c---HHHHH---HHhcCCCCCeEEE--EeCCCchhhhhCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T---PGVTA---DISHMDTGAVVRG--FLGQPQLENALTG  109 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~---~~~~~---dl~~~~~~~~v~~--~~~t~d~~~al~~  109 (353)
                      ..+|+|.|+||+|++|++++..|+..|.  +|++++++. .   .....   ++....  ..+..  +....++.+++++
T Consensus         2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~l~~~~~~~--v~~v~~D~~d~~~l~~a~~~   77 (321)
T 3c1o_A            2 SHMEKIIIYGGTGYIGKFMVRASLSFSH--PTFIYARPLTPDSTPSSVQLREEFRSMG--VTIIEGEMEEHEKMVSVLKQ   77 (321)
T ss_dssp             --CCCEEEETTTSTTHHHHHHHHHHTTC--CEEEEECCCCTTCCHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTT
T ss_pred             CcccEEEEEcCCchhHHHHHHHHHhCCC--cEEEEECCcccccChHHHHHHHHhhcCC--cEEEEecCCCHHHHHHHHcC
Confidence            3467899999999999999999999886  889999874 1   11111   222211  11111  1111246678999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      +|+||.+++...             ....+.+++.+.+.+
T Consensus        78 ~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g  104 (321)
T 3c1o_A           78 VDIVISALPFPM-------------ISSQIHIINAIKAAG  104 (321)
T ss_dssp             CSEEEECCCGGG-------------SGGGHHHHHHHHHHC
T ss_pred             CCEEEECCCccc-------------hhhHHHHHHHHHHhC
Confidence            999999987432             223456666666664

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.53  E-value=0.00024  Score=63.85  Aligned_cols=154  Identities=16%  Similarity=0.143  Sum_probs=84.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh---CCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL---TGM  110 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al---~~A  110 (353)
                      +.++|.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++..     .+.... .-+|   .++.+   .+.
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~i   85 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNALKD-----NYTIEVCNLANKEECSNLISKTSNL   85 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCS-----SEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhcc-----CccEEEcCCCCHHHHHHHHHhcCCC
Confidence            345899999999999999999999997  899999876  2222223321     122111 1122   22223   378


Q ss_pred             cEEEEcCCCCCC------CCCCHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          111 DLVIIPAGVPRK------PGMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       111 DiVIi~ag~~~~------~g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      |++|..+|....      ...+....+..|+.....+.+.+..+   ...+.|+++|......            +.+..
T Consensus        86 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~  153 (249)
T 3f9i_A           86 DILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIA------------GNPGQ  153 (249)
T ss_dssp             SEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--------------CCSCS
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhcc------------CCCCC
Confidence            999999986431      11234455667766555554444322   2456777776544321            23333


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      -.++.+......+-+.+++.++  +..|++..+
T Consensus       154 ~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  184 (249)
T 3f9i_A          154 ANYCASKAGLIGMTKSLSYEVA--TRGITVNAV  184 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             chhHHHHHHHHHHHHHHHHHHH--HcCcEEEEE
Confidence            3455544444456667777663  334444443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.52  E-value=0.00078  Score=62.06  Aligned_cols=172  Identities=13%  Similarity=0.114  Sum_probs=87.1

Q ss_pred             cchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CC
Q 018618           24 QNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQ  100 (353)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t  100 (353)
                      -+++|++........-+.+++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++.... ...+..+. .-
T Consensus        16 ~~l~~~~~~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv   92 (281)
T 4dry_A           16 ENLYFQSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGY--SVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDV   92 (281)
T ss_dssp             ------------------CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCT
T ss_pred             ceEEEeccccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCC
Confidence            3566665443333333445789999999999999999999998  899999876  233333333211 11112211 11


Q ss_pred             Cch---hhhh-------CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHH----HHHHHHHHHhhC-CCcEEEEec
Q 018618          101 PQL---ENAL-------TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGI----VRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       101 ~d~---~~al-------~~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i----~~~i~~~i~~~~-p~a~viv~t  158 (353)
                      +|.   ++++       ...|++|..||.....+    .+   ....+..|+..    .+.+.+.+.+.. +.+.||++|
T Consensus        93 ~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~is  172 (281)
T 4dry_A           93 GDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNG  172 (281)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEEC
Confidence            222   2222       36799999998643211    22   23345666555    455555555544 257777776


Q ss_pred             CCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcce
Q 018618          159 NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP  212 (353)
Q Consensus       159 NPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~  212 (353)
                      .-...            .+.+..-.++.+......+-+.+|..++  +..|++.
T Consensus       173 S~~~~------------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn  212 (281)
T 4dry_A          173 SISAQ------------TPRPNSAPYTATKHAITGLTKSTALDGR--MHDIACG  212 (281)
T ss_dssp             CGGGT------------CCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEE
T ss_pred             CHHhC------------CCCCCChhHHHHHHHHHHHHHHHHHHhc--ccCeEEE
Confidence            53211            1233334455544444456677777764  3344433

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.52  E-value=0.0018  Score=58.87  Aligned_cols=148  Identities=19%  Similarity=0.185  Sum_probs=85.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCch---hhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL---ENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++.... ...+..+.. -+|.   ++++       .
T Consensus        11 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A           11 RSVVVTGGTKGIGRGIATVFARAGA--NVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4788999999999999999999998  999999876  333444555432 123333211 1232   2222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      ..|++|..+|.....   ..+.   ...+..|+.....+++.+..+   ...+.||++|.-....           .+.|
T Consensus        88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~-----------~~~~  156 (262)
T 3pk0_A           88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI-----------TGYP  156 (262)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT-----------BCCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc-----------CCCC
Confidence            899999999864321   2232   334566765555544444333   1345666665433211           1233


Q ss_pred             CCceEeechhhHHHHHHHHHHHhC
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      ..-.++.+......+-+.+|..++
T Consensus       157 ~~~~Y~asK~a~~~l~~~la~e~~  180 (262)
T 3pk0_A          157 GWSHYGATKAAQLGFMRTAAIELA  180 (262)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CChhhHHHHHHHHHHHHHHHHHHH
Confidence            333455544444556677777763

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=97.52  E-value=0.001  Score=60.86  Aligned_cols=91  Identities=14%  Similarity=0.146  Sum_probs=60.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||+|||+ |.+|..++..|...|+  +|+++|+++....  .+..... . ...   +++++++ +++|+||++...  
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~--~~~~~g~-~-~~~---~~~~~~~-~~~D~vi~av~~--   67 (279)
T 2f1k_A            1 MKIGVVGL-GLIGASLAGDLRRRGH--YLIGVSRQQSTCE--KAVERQL-V-DEA---GQDLSLL-QTAKIIFLCTPI--   67 (279)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHH--HHHHTTS-C-SEE---ESCGGGG-TTCSEEEECSCH--
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCC--EEEEEECCHHHHH--HHHhCCC-C-ccc---cCCHHHh-CCCCEEEEECCH--
Confidence            69999998 9999999999998887  8999998752211  1222111 1 122   2356677 999999998521  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                                    ..+.++++.+..+. |+.+|+.+++
T Consensus        68 --------------~~~~~~~~~l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           68 --------------QLILPTLEKLIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             --------------HHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             --------------HHHHHHHHHHHhhCCCCCEEEECCC
Confidence                          13456666676655 5777766544

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=97.51  E-value=0.00014  Score=65.87  Aligned_cols=96  Identities=13%  Similarity=0.185  Sum_probs=61.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC--CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL--VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~--~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||+|||+ |.+|..++..|...|+  ..+|.++|+++..  ..++....   .+..   .++.++++++||+||++.. 
T Consensus         3 ~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~--~~~~~~~~---g~~~---~~~~~e~~~~aDvVilav~-   72 (247)
T 3gt0_A            3 KQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTAN--LKNASEKY---GLTT---TTDNNEVAKNADILILSIK-   72 (247)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHH--HHHHHHHH---CCEE---CSCHHHHHHHCSEEEECSC-
T ss_pred             CeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHH--HHHHHHHh---CCEE---eCChHHHHHhCCEEEEEeC-
Confidence            69999998 9999999999998885  3589999987622  11221100   1222   2466788999999999861 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      +   .            .+.++++.+..+. |+.+|+..++.+.
T Consensus        73 ~---~------------~~~~v~~~l~~~l~~~~~vvs~~~gi~  101 (247)
T 3gt0_A           73 P---D------------LYASIINEIKEIIKNDAIIVTIAAGKS  101 (247)
T ss_dssp             T---T------------THHHHC---CCSSCTTCEEEECSCCSC
T ss_pred             H---H------------HHHHHHHHHHhhcCCCCEEEEecCCCC
Confidence            2   1            1445666676655 5666654555554

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=97.51  E-value=0.00013  Score=68.33  Aligned_cols=65  Identities=15%  Similarity=0.241  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+||+|||. |.+|..++..|...|+  +|.++|+++..  ...+....    ...   .+++++++++||+||++.
T Consensus         9 ~~~IgiIG~-G~mG~~~A~~l~~~G~--~V~~~dr~~~~--~~~~~~~g----~~~---~~~~~e~~~~aDvVi~~v   73 (306)
T 3l6d_A            9 EFDVSVIGL-GAMGTIMAQVLLKQGK--RVAIWNRSPGK--AAALVAAG----AHL---CESVKAALSASPATIFVL   73 (306)
T ss_dssp             SCSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHH--HHHHHHHT----CEE---CSSHHHHHHHSSEEEECC
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHCC----Cee---cCCHHHHHhcCCEEEEEe
Confidence            569999998 9999999999999998  89999987621  11222211    121   356788899999999985

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=97.51  E-value=0.0004  Score=65.20  Aligned_cols=69  Identities=12%  Similarity=0.191  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +|||+|||+ |.+|..++..|...|+ .+|+++|+++.......+....    +..   .+++++++++||+||++..
T Consensus        24 ~~~I~iIG~-G~mG~~~A~~L~~~G~-~~V~~~dr~~~~~~~~~~~~~g----~~~---~~~~~e~~~~aDvVi~~vp   92 (312)
T 3qsg_A           24 AMKLGFIGF-GEAASAIASGLRQAGA-IDMAAYDAASAESWRPRAEELG----VSC---KASVAEVAGECDVIFSLVT   92 (312)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHHSC-CEEEEECSSCHHHHHHHHHHTT----CEE---CSCHHHHHHHCSEEEECSC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCC-CeEEEEcCCCCHHHHHHHHHCC----CEE---eCCHHHHHhcCCEEEEecC
Confidence            479999999 9999999999998875 4899999963011112222221    222   2466788999999999853

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=97.50  E-value=0.0008  Score=60.11  Aligned_cols=145  Identities=13%  Similarity=0.109  Sum_probs=80.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~-------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++... ....+..+.. -+|   .+++++       
T Consensus         3 k~vlItGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            3 RVAIVTGASSGNGLAIATRFLARGD--RVAALDLSAETLEETARTHWHA-YADKVLRVRADVADEGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHSTT-TGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999997  899999875  22222333111 1123333211 122   223333       


Q ss_pred             CCcEEEEcCCCCCCCC------CC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          109 GMDLVIIPAGVPRKPG------MT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g------~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      +.|+||..+|......      .+   ....+..|+...    +.+.+.+.+.. .+.++++|.....            
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~------------  146 (250)
T 2cfc_A           80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASL------------  146 (250)
T ss_dssp             CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------------
T ss_pred             CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhc------------
Confidence            7899999998643211      12   233455666554    44444444443 4566666543211            


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHh
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      .+.+..-.++.+......+-+.+++.+
T Consensus       147 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~  173 (250)
T 2cfc_A          147 VAFPGRSAYTTSKGAVLQLTKSVAVDY  173 (250)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCchhHHHHHHHHHHHHHHHHHHh
Confidence            122333334444333445556666665

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.49  E-value=0.00041  Score=64.65  Aligned_cols=76  Identities=18%  Similarity=0.288  Sum_probs=56.1

Q ss_pred             CeEEEEc-CCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILG-AAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiG-a~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      +||+||| + |.+|..++..|...|+  +|.++|+++.                      .+..+++++||+||++....
T Consensus        22 ~~I~iIGg~-G~mG~~la~~l~~~G~--~V~~~~~~~~----------------------~~~~~~~~~aDvVilavp~~   76 (298)
T 2pv7_A           22 HKIVIVGGY-GKLGGLFARYLRASGY--PISILDREDW----------------------AVAESILANADVVIVSVPIN   76 (298)
T ss_dssp             CCEEEETTT-SHHHHHHHHHHHTTTC--CEEEECTTCG----------------------GGHHHHHTTCSEEEECSCGG
T ss_pred             CEEEEEcCC-CHHHHHHHHHHHhCCC--eEEEEECCcc----------------------cCHHHHhcCCCEEEEeCCHH
Confidence            4899999 7 9999999999999887  8999997652                      13457889999999985311


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                                      .+.++++.+..+. |+++|+.++
T Consensus        77 ----------------~~~~vl~~l~~~l~~~~iv~~~~   99 (298)
T 2pv7_A           77 ----------------LTLETIERLKPYLTENMLLADLT   99 (298)
T ss_dssp             ----------------GHHHHHHHHGGGCCTTSEEEECC
T ss_pred             ----------------HHHHHHHHHHhhcCCCcEEEECC
Confidence                            1455566666554 567665543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.49  E-value=0.00012  Score=67.17  Aligned_cols=141  Identities=14%  Similarity=0.077  Sum_probs=83.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      ++|.|+||+|.+|++++..|++.|.  +|++.|++..  .....++     ...+..+. .-+|   .+++++       
T Consensus         6 k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            6 KVWLVTGASSGFGRAIAEAAVAAGD--TVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            4789999999999999999999997  9999998762  2222211     11222221 1122   222333       


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      +.|+||+.||.....   ..+   ....+..|+..    .+.+.+.+++.. .+.||++|.....            .+.
T Consensus        79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~------------~~~  145 (281)
T 3m1a_A           79 RVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQ------------LSF  145 (281)
T ss_dssp             CCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------------CCC
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccc------------CCC
Confidence            789999999864211   222   23456677777    666776666554 4556666542211            123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHh
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      ++.-.++.+......+-+.+++.+
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~  169 (281)
T 3m1a_A          146 AGFSAYSATKAALEQLSEGLADEV  169 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHh
Confidence            444455555444455667777775

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=97.49  E-value=0.0001  Score=63.91  Aligned_cols=103  Identities=15%  Similarity=0.180  Sum_probs=66.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC---CCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~---~ADiVIi~a  117 (353)
                      +|||.|+||+|.+|++++..|+ .|.  +|+++|++.. ....|+.+            ..+++++++   ..|+||.++
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~--~V~~~~r~~~-~~~~D~~~------------~~~~~~~~~~~~~~d~vi~~a   66 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKA--EVITAGRHSG-DVTVDITN------------IDSIKKMYEQVGKVDAIVSAT   66 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTS--EEEEEESSSS-SEECCTTC------------HHHHHHHHHHHCCEEEEEECC
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCC--eEEEEecCcc-ceeeecCC------------HHHHHHHHHHhCCCCEEEECC
Confidence            4799999999999999999999 887  8999998652 00011111            112233333   489999999


Q ss_pred             CCCCCCC---CCH---HHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecC
Q 018618          118 GVPRKPG---MTR---DDLFNINAGIVRTLCEGIAKCCP-NATVNLISN  159 (353)
Q Consensus       118 g~~~~~g---~~r---~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tN  159 (353)
                      |......   .+.   ...+..|+.....+++.+.++-. .+.++++|.
T Consensus        67 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS  115 (202)
T 3d7l_A           67 GSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTG  115 (202)
T ss_dssp             CCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECC
T ss_pred             CCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcc
Confidence            8643211   122   34456788888888877776532 256666654

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=97.49  E-value=4e-05  Score=70.31  Aligned_cols=105  Identities=10%  Similarity=0.062  Sum_probs=65.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCC-CcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTG-MDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~-ADiVIi~ag  118 (353)
                      +|||.|+|+ |++|++++..|+..|.  +|+.++++...     +. ... ..+.. +....++.+++++ +|+||.+++
T Consensus         3 ~~~ilVtGa-G~iG~~l~~~L~~~g~--~V~~~~r~~~~-----~~-~~~-~~~~~Dl~d~~~~~~~~~~~~d~vih~a~   72 (286)
T 3gpi_A            3 LSKILIAGC-GDLGLELARRLTAQGH--EVTGLRRSAQP-----MP-AGV-QTLIADVTRPDTLASIVHLRPEILVYCVA   72 (286)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTC--CEEEEECTTSC-----CC-TTC-CEEECCTTCGGGCTTGGGGCCSEEEECHH
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCccc-----cc-cCC-ceEEccCCChHHHHHhhcCCCCEEEEeCC
Confidence            479999996 9999999999999987  89999987521     10 000 11111 0011234456677 999999986


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ...   .+..++...|+.....+++.+.+....-+|.+.|
T Consensus        73 ~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS  109 (286)
T 3gpi_A           73 ASE---YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSS  109 (286)
T ss_dssp             HHH---HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEE
T ss_pred             CCC---CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcc
Confidence            421   2233445678999999999998754443443333

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=97.49  E-value=0.00026  Score=73.53  Aligned_cols=115  Identities=19%  Similarity=0.074  Sum_probs=73.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHh---cCCCCCeEEE-EeCCCchhhhhC--CCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADIS---HMDTGAVVRG-FLGQPQLENALT--GMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~---~~~~~~~v~~-~~~t~d~~~al~--~ADi  112 (353)
                      .++|.|+||+|++|++++..|++.|.  +|+++|++.  ......++.   .... ..+.. +....+++++++  ++|+
T Consensus        11 ~~~ilVTGatG~IG~~l~~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~v-~~v~~Dl~d~~~l~~~~~~~~~D~   87 (699)
T 1z45_A           11 SKIVLVTGGAGYIGSHTVVELIENGY--DCVVADNLSNSTYDSVARLEVLTKHHI-PFYEVDLCDRKGLEKVFKEYKIDS   87 (699)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTHHHHHHHHHHTSCC-CEEECCTTCHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCCcchHHHHHHHhhccCCce-EEEEcCCCCHHHHHHHHHhCCCCE
Confidence            46999999999999999999999887  999999765  211111221   1111 11111 101123445666  8999


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          113 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       113 VIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ||.+|+.....  .....+.+..|+.....+++.+++.....+|.+.|
T Consensus        88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS  135 (699)
T 1z45_A           88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS  135 (699)
T ss_dssp             EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECc
Confidence            99998754211  11234567889999999999998775444444333

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=97.48  E-value=0.0014  Score=60.48  Aligned_cols=121  Identities=12%  Similarity=0.101  Sum_probs=73.4

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC---CCCeEEEEeC-CCc---hhhhhC-
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD---TGAVVRGFLG-QPQ---LENALT-  108 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~---~~~~v~~~~~-t~d---~~~al~-  108 (353)
                      .+.++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....   ....+..+.. -+|   .+++++ 
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            3346899999999999999999999997  899999875  233333443210   1123333221 122   223333 


Q ss_pred             ------CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCCC
Q 018618          109 ------GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPV  161 (353)
Q Consensus       109 ------~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNPv  161 (353)
                            ..|+||..||.....   ..+   ....+..|+.....+++.+....   ..+.+++++...
T Consensus        94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~  161 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT  161 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec
Confidence                  589999999854321   122   23456778777777776654421   246667666543

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.48  E-value=0.00029  Score=63.59  Aligned_cols=115  Identities=15%  Similarity=0.103  Sum_probs=74.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-----
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-----  108 (353)
                      .++|.|+||+|.+|.+++..|++ .|.  +|+++|++.  ......++....  ..+..+. .-+|   .+++++     
T Consensus         4 ~k~vlITGasggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            4 IHVALVTGGNKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            35899999999999999999999 887  899999875  233333443321  1222211 1122   223333     


Q ss_pred             --CCcEEEEcCCCCCCCC--C----CHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          109 --GMDLVIIPAGVPRKPG--M----TRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       109 --~ADiVIi~ag~~~~~g--~----~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                        +.|+||+.||......  .    +....+..|+.....+.+.+..+. +.+.||++|.
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS  139 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  139 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence              8999999998653221  1    123456788888888888887664 3456666654

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=97.48  E-value=0.0003  Score=68.47  Aligned_cols=114  Identities=11%  Similarity=0.065  Sum_probs=70.5

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--H---HHHHHhcC-------CCCCeEEEEeC----CCc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G---VTADISHM-------DTGAVVRGFLG----QPQ  102 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~---~~~dl~~~-------~~~~~v~~~~~----t~d  102 (353)
                      .++++|.|+||+|++|++++..|...|.  +|++++++...  +   ....+...       .....+..+.+    ..+
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSH--RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEE--EEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCC--EEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            3456899999999999999999977776  99999987621  1   11111110       00122222211    122


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +. ++.++|+||.+|+.... ..+..+....|+.....+++.+.+ . ...++++|
T Consensus       145 l~-~~~~~d~Vih~A~~~~~-~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~S  196 (427)
T 4f6c_A          145 VV-LPENMDTIIHAGARTDH-FGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVS  196 (427)
T ss_dssp             CC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEE
T ss_pred             CC-CcCCCCEEEECCcccCC-CCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEEC
Confidence            22 67899999999986532 234456678899999999999988 3 33444443

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.47  E-value=0.00021  Score=66.18  Aligned_cols=64  Identities=19%  Similarity=0.242  Sum_probs=47.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||+ |.+|..++..|...|+  +|.++|+++..  ...+....    +..   .++++++++++|+||++.
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~~~~~~--~~~~~~~g----~~~---~~~~~~~~~~~D~vi~~v   69 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVSDRNPEA--IADVIAAG----AET---ASTAKAIAEQCDVIITML   69 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHH--HHHHHHTT----CEE---CSSHHHHHHHCSEEEECC
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCC--EEEEEeCCHHH--HHHHHHCC----Cee---cCCHHHHHhCCCEEEEEC
Confidence            69999998 9999999999998887  89999987522  12222211    222   346778889999999985

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.47  E-value=0.00038  Score=65.88  Aligned_cols=96  Identities=17%  Similarity=0.153  Sum_probs=60.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC-CC------CCe-EEEEeCCCchhhhhCCCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DT------GAV-VRGFLGQPQLENALTGMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~-~~------~~~-v~~~~~t~d~~~al~~ADi  112 (353)
                      +|||+|||+ |.+|..++..|...|+  +|.++|+++....  .+... ..      ... ......+++++++++++|+
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   78 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQ--SVLAWDIDAQRIK--EIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADV   78 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHH--HHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSE
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCCHHHHH--HHHhcCCeEEeccccccccccceecCCHHHHHhcCCE
Confidence            479999999 9999999999998887  8999998752111  11110 00      000 0000012567788899999


Q ss_pred             EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe
Q 018618          113 VIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI  157 (353)
Q Consensus       113 VIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~  157 (353)
                      ||++.....                ..++++.+..+. ++.+|+..
T Consensus        79 vi~~v~~~~----------------~~~~~~~l~~~l~~~~~vv~~  108 (359)
T 1bg6_A           79 ILIVVPAIH----------------HASIAANIASYISEGQLIILN  108 (359)
T ss_dssp             EEECSCGGG----------------HHHHHHHHGGGCCTTCEEEES
T ss_pred             EEEeCCchH----------------HHHHHHHHHHhCCCCCEEEEc
Confidence            999863220                135556666655 56655555

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=97.47  E-value=0.0003  Score=67.52  Aligned_cols=93  Identities=13%  Similarity=0.226  Sum_probs=63.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCC---cEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGM---DLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~A---DiVIi~a  117 (353)
                      .|||+|||. |.+|..++..|+..|+  +|.++|+++.  .+.++....    +.   ..++++++++++   |+||++.
T Consensus        22 ~mkIgiIGl-G~mG~~~A~~L~~~G~--~V~v~dr~~~--~~~~l~~~g----~~---~~~s~~e~~~~a~~~DvVi~~v   89 (358)
T 4e21_A           22 SMQIGMIGL-GRMGADMVRRLRKGGH--ECVVYDLNVN--AVQALEREG----IA---GARSIEEFCAKLVKPRVVWLMV   89 (358)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHTTT----CB---CCSSHHHHHHHSCSSCEEEECS
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhCCC--EEEEEeCCHH--HHHHHHHCC----CE---EeCCHHHHHhcCCCCCEEEEeC
Confidence            479999998 9999999999999997  9999998752  222333321    11   235677888888   9999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  161 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  161 (353)
                      ..+                .+.++++.+.... |+.+||..||-.
T Consensus        90 p~~----------------~v~~vl~~l~~~l~~g~iiId~st~~  118 (358)
T 4e21_A           90 PAA----------------VVDSMLQRMTPLLAANDIVIDGGNSH  118 (358)
T ss_dssp             CGG----------------GHHHHHHHHGGGCCTTCEEEECSSCC
T ss_pred             CHH----------------HHHHHHHHHHhhCCCCCEEEeCCCCC
Confidence            211                1344555666655 667777666543

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=97.46  E-value=0.00011  Score=70.09  Aligned_cols=158  Identities=14%  Similarity=0.029  Sum_probs=88.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC-----CCC-eEEEEeCC-C---chhhhhCC--
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-----TGA-VVRGFLGQ-P---QLENALTG--  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~-----~~~-~v~~~~~t-~---d~~~al~~--  109 (353)
                      ++|.|+||+|++|++++..|+..|.  +|+++|++........+.+..     ... .+..+... +   ++.+++++  
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~  106 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGY--EVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK  106 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCC--EEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence            4899999999999999999999887  999999865210000011110     011 33332221 2   23455665  


Q ss_pred             CcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCC----CcEEEEecCCC-Cchh-HHHHHHHHHhCCCCCC
Q 018618          110 MDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCP----NATVNLISNPV-NSTV-PIAAEVFKKAGTYDPK  181 (353)
Q Consensus       110 ADiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p----~a~viv~tNPv-~~~t-~~~~~~~~~~~~~~~~  181 (353)
                      .|+||.+++.....  ..+....+..|+.....+++.+.+...    .+.+|++|... .... ..    +......++.
T Consensus       107 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~----~~E~~~~~~~  182 (381)
T 1n7h_A          107 PDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPP----QSETTPFHPR  182 (381)
T ss_dssp             CSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSS----BCTTSCCCCC
T ss_pred             CCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCC----CCCCCCCCCC
Confidence            59999998754211  123445667888888888888887642    34666654311 0000 00    0011112333


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCC
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLD  205 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~  205 (353)
                      ..+|.+.....++-..+++.++++
T Consensus       183 ~~Y~~sK~~~E~~~~~~~~~~~~~  206 (381)
T 1n7h_A          183 SPYAASKCAAHWYTVNYREAYGLF  206 (381)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred             CchHHHHHHHHHHHHHHHHHhCCc
Confidence            455665555555656666666654

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.46  E-value=0.001  Score=59.86  Aligned_cols=155  Identities=15%  Similarity=0.121  Sum_probs=85.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|+ +.  ......++...  ...+..+.. -+|   .+++++      
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            8 KVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4899999999999999999999987  8999998 43  22223334322  123332211 122   222333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                       +.|+||..+|.....   ..+   ....+..|+.....+.+    .+.+..+.+.||++|.....            .+
T Consensus        84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~------------~~  151 (261)
T 1gee_A           84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK------------IP  151 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------------SC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhc------------CC
Confidence             789999999865321   122   23445666655544444    44433325667766642211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .++.-.++.+......+-+.+++.+.  +..+++.++
T Consensus       152 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  186 (261)
T 1gee_A          152 WPLFVHYAASKGGMKLMTETLALEYA--PKGIRVNNI  186 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            33333444444344455566676663  334544444

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.46  E-value=0.00072  Score=62.86  Aligned_cols=115  Identities=16%  Similarity=0.119  Sum_probs=70.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++....  ..+..+. .-+|   .++++       .
T Consensus        32 k~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           32 RAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999997  899999976  333344454322  2222221 1123   22233       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHHhhCCCcEEEEecCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISNP  160 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNP  160 (353)
                      ..|++|..||.....   ..+   ....+..|+.....+.    +.+.+..+.+.|+++|..
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  169 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASF  169 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCch
Confidence            789999999865321   122   2334556655444444    445555546777777653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=97.45  E-value=4.1e-05  Score=69.38  Aligned_cols=150  Identities=13%  Similarity=0.051  Sum_probs=86.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~ADiV  113 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++.....     .    ..+.. .....+.+++       +...|++
T Consensus        23 k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~-----~----~~~~~d~~d~~~v~~~~~~~~~~~g~iD~l   91 (251)
T 3orf_A           23 KNILVLGGSGALGAEVVKFFKSKSW--NTISIDFRENPNA-----D----HSFTIKDSGEEEIKSVIEKINSKSIKVDTF   91 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCTTS-----S----EEEECSCSSHHHHHHHHHHHHTTTCCEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCccccc-----c----cceEEEeCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3799999999999999999999998  8999998762110     0    00110 1011122222       2356999


Q ss_pred             EEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          114 IIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       114 Ii~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      |..+|.....    ..+   ....+..|+.....+.+.+..+- +.+.||++|.....            .+.+..-.++
T Consensus        92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~Y~  159 (251)
T 3orf_A           92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL------------NRTSGMIAYG  159 (251)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------------SCCTTBHHHH
T ss_pred             EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhc------------cCCCCCchhH
Confidence            9999864221    111   23456678887777777776553 34677776643211            1233333344


Q ss_pred             echhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          186 VTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       186 ~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+......+-+.+++.++..+..|++..+
T Consensus       160 ~sKaa~~~~~~~la~e~~~~~~gi~v~~v  188 (251)
T 3orf_A          160 ATKAATHHIIKDLASENGGLPAGSTSLGI  188 (251)
T ss_dssp             HHHHHHHHHHHHHTSTTSSSCTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCcEEEEE
Confidence            44333344555565555433556655554

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.45  E-value=0.0016  Score=59.03  Aligned_cols=157  Identities=10%  Similarity=0.055  Sum_probs=91.5

Q ss_pred             CeEEEEcCCCC--cHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe----CCCchhhhh-------
Q 018618           42 FKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL----GQPQLENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~--vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al-------  107 (353)
                      +++.|+||+|+  +|.+++..|++.|.  +|+++|+++ ......++........+..+.    ...+.++++       
T Consensus         8 k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            8 RNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            47999999988  99999999999998  899999876 223333333221111222211    112222333       


Q ss_pred             CCCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          108 TGMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      ...|++|..+|....     +  ..+   ....+..|+.....+.+.+..+- +.+.||++|......            
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~------------  153 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL------------  153 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS------------
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc------------
Confidence            367999999986531     1  122   23456678877777887777654 456777776432211            


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +.|..-.++.+......+-+.+++.+.  +..|++..+
T Consensus       154 ~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v  189 (266)
T 3oig_A          154 VMPNYNVMGVAKASLDASVKYLAADLG--KENIRVNSI  189 (266)
T ss_dssp             CCTTTHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             cCCCcchhHHHHHHHHHHHHHHHHHHh--hcCcEEEEE
Confidence            233333445544444456677777763  334544444

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=97.44  E-value=0.00037  Score=65.61  Aligned_cols=65  Identities=18%  Similarity=0.180  Sum_probs=48.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCC-----cHHHHHHHhcCCCCCeEEEEeCCC-chhhhhCCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFLGQP-QLENALTGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~-----~~~~~~dl~~~~~~~~v~~~~~t~-d~~~al~~ADiVI  114 (353)
                      |||+|||+ |.+|..++..|+..| +  +|.++|+++     .......+....  .    .   + ++++++++||+||
T Consensus        25 m~IgvIG~-G~mG~~lA~~L~~~G~~--~V~~~dr~~~~~~~~~~~~~~~~~~g--~----~---~~s~~e~~~~aDvVi   92 (317)
T 4ezb_A           25 TTIAFIGF-GEAAQSIAGGLGGRNAA--RLAAYDLRFNDPAASGALRARAAELG--V----E---PLDDVAGIACADVVL   92 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCS--EEEEECGGGGCTTTHHHHHHHHHHTT--C----E---EESSGGGGGGCSEEE
T ss_pred             CeEEEECc-cHHHHHHHHHHHHcCCC--eEEEEeCCCccccchHHHHHHHHHCC--C----C---CCCHHHHHhcCCEEE
Confidence            69999998 999999999999998 7  999999874     112223333221  1    1   2 4568899999999


Q ss_pred             EcCC
Q 018618          115 IPAG  118 (353)
Q Consensus       115 i~ag  118 (353)
                      ++..
T Consensus        93 ~avp   96 (317)
T 4ezb_A           93 SLVV   96 (317)
T ss_dssp             ECCC
T ss_pred             EecC
Confidence            9853

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.44  E-value=0.00063  Score=61.64  Aligned_cols=142  Identities=17%  Similarity=0.134  Sum_probs=78.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++..  .....++..     .+..+. .-+|   .+++++       
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~d~~~v~~~~~~~~~~~g   85 (263)
T 3ak4_A           13 RKAIVTGGSKGIGAAIARALDKAGA--TVAIADLDVMAAQAVVAGLEN-----GGFAVEVDVTKRASVDAAMQKAIDALG   85 (263)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCTT-----CCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhc-----CCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999998  8999998752  211222211     111111 1122   233343       


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      +.|++|..+|.....   ..+   ....+..|+.....+.+.    +.+....+.|++++.....            .+.
T Consensus        86 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~  153 (263)
T 3ak4_A           86 GFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAK------------VGA  153 (263)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGT------------SCC
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc------------cCC
Confidence            899999999865321   122   233456666555444444    4333324666666542211            122


Q ss_pred             CCCceEeechhhHHHHHHHHHHHh
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      |..-.++.+......+-+.+++.+
T Consensus       154 ~~~~~Y~~sK~a~~~~~~~la~e~  177 (263)
T 3ak4_A          154 PLLAHYSASKFAVFGWTQALAREM  177 (263)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHH
Confidence            222334444333445566677666

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=97.44  E-value=0.0019  Score=58.02  Aligned_cols=115  Identities=18%  Similarity=0.197  Sum_probs=70.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcE-EEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCc----hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ----LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~e-l~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d----~~~al-------  107 (353)
                      .++|.|+||+|.+|.+++..|++.|.  + |+++|++.......++........+..+.. -+|    .++++       
T Consensus         5 ~k~vlVtGas~gIG~~~a~~l~~~G~--~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            5 NKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCC--cEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            35899999999999999999999987  5 899998763222233332111123333211 122    22222       


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh----C--CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC----C--PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~----~--p~a~viv~tN  159 (353)
                      .+.|++|..+|...  ..+....+..|+.....+.+.+..+    .  +.+.|+++|.
T Consensus        83 g~id~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS  138 (254)
T 1sby_A           83 KTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICS  138 (254)
T ss_dssp             SCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CCCCEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECc
Confidence            37899999998642  2345566677776666665555432    1  2466777664

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=97.44  E-value=0.0009  Score=61.56  Aligned_cols=174  Identities=13%  Similarity=0.117  Sum_probs=86.6

Q ss_pred             CCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEE
Q 018618           19 YPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVR   95 (353)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~   95 (353)
                      ||..+.++.|+....+    ...+++.|+||+|.+|.+++..|++.|.  +|+++|.+.   ......++....  ..+.
T Consensus        11 ~~~~~~n~~~~~mm~~----~~~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~   82 (280)
T 4da9_A           11 VDLGTENLYFQSMMTQ----KARPVAIVTGGRRGIGLGIARALAASGF--DIAITGIGDAEGVAPVIAELSGLG--ARVI   82 (280)
T ss_dssp             ------------CCSC----CCCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCHHHHHHHHHHHHHTT--CCEE
T ss_pred             ccccccchhhhhhhhc----cCCCEEEEecCCCHHHHHHHHHHHHCCC--eEEEEeCCCHHHHHHHHHHHHhcC--CcEE
Confidence            3445566666543221    1234789999999999999999999998  899999754   233333444322  2333


Q ss_pred             EEe-C---CCchhhhhC-------CCcEEEEcCCCC--C-CC--CCCH---HHHHHHHHHH----HHHHHHHHHhhCC--
Q 018618           96 GFL-G---QPQLENALT-------GMDLVIIPAGVP--R-KP--GMTR---DDLFNINAGI----VRTLCEGIAKCCP--  150 (353)
Q Consensus        96 ~~~-~---t~d~~~al~-------~ADiVIi~ag~~--~-~~--g~~r---~~~~~~N~~i----~~~i~~~i~~~~p--  150 (353)
                      .+. .   ..+.+++++       ..|++|..||..  . .+  ..+.   ...+..|+..    .+.+.+.+.+...  
T Consensus        83 ~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~  162 (280)
T 4da9_A           83 FLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARA  162 (280)
T ss_dssp             EEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             EEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCC
Confidence            221 1   122333333       789999999873  1 11  1222   2333455544    4455555555442  


Q ss_pred             CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          151 NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       151 ~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+.||++|......            +.+..-.++.+......+-+.+|..++  +..|++..+
T Consensus       163 ~g~Iv~isS~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  212 (280)
T 4da9_A          163 SRSIINITSVSAVM------------TSPERLDYCMSKAGLAAFSQGLALRLA--ETGIAVFEV  212 (280)
T ss_dssp             CEEEEEECCC-------------------CCHHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEE
T ss_pred             CCEEEEEcchhhcc------------CCCCccHHHHHHHHHHHHHHHHHHHHH--HhCcEEEEE
Confidence            56777776543221            122233345544444556677787774  445554444

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.43  E-value=0.00086  Score=60.46  Aligned_cols=143  Identities=15%  Similarity=0.076  Sum_probs=81.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCC---chhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQP---QLENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~---d~~~al~------  108 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.     ..+..+. .-+   +.+++++      
T Consensus        12 ~k~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A           12 GLVAVITGGASGLGLATAERLVGQGA--SAVLLDLPNSGGEAQAKKLG-----NNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSSHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCcHhHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            35899999999999999999999997  899999876  232333331     1222211 112   2333343      


Q ss_pred             -CCcEEEEcCCCCCCCC---------CC---HHHHHHHHHHHHHHHHHHHHhhC---------CCcEEEEecCCCCchhH
Q 018618          109 -GMDLVIIPAGVPRKPG---------MT---RDDLFNINAGIVRTLCEGIAKCC---------PNATVNLISNPVNSTVP  166 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~g---------~~---r~~~~~~N~~i~~~i~~~i~~~~---------p~a~viv~tNPv~~~t~  166 (353)
                       ..|+||..+|......         .+   ....+..|+.....+.+.+..+-         ..+.||++|....    
T Consensus        85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~----  160 (265)
T 2o23_A           85 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA----  160 (265)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH----
T ss_pred             CCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh----
Confidence             8999999998643211         22   23455667766666665555431         3456666654211    


Q ss_pred             HHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHh
Q 018618          167 IAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       167 ~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                             . .+.+..-.++.+......+-+.+++.+
T Consensus       161 -------~-~~~~~~~~Y~~sK~a~~~~~~~la~e~  188 (265)
T 2o23_A          161 -------F-EGQVGQAAYSASKGGIVGMTLPIARDL  188 (265)
T ss_dssp             -------H-HCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------c-CCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence                   0 123333344444433344556666665

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=97.43  E-value=0.00019  Score=66.39  Aligned_cols=94  Identities=16%  Similarity=0.046  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHH---HHhcCCCCCeEEEEe----CCCchhhhhCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTA---DISHMDTGAVVRGFL----GQPQLENALTGM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~---dl~~~~~~~~v~~~~----~t~d~~~al~~A  110 (353)
                      ++||.|+||+|++|++++..|+..|.  +|++++++..   .....   ++...    .+..+.    ...++.++++++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~~~----~~~~~~~D~~d~~~l~~~~~~~   77 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH--PTYVLFRPEVVSNIDKVQMLLYFKQL----GAKLIEASLDDHQRLVDALKQV   77 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCSCCSSCHHHHHHHHHHHTT----TCEEECCCSSCHHHHHHHHTTC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC--cEEEEECCCcccchhHHHHHHHHHhC----CeEEEeCCCCCHHHHHHHHhCC
Confidence            46899999999999999999999886  8899998741   22221   22221    122211    113466889999


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      |+||.+++.... +        .|....+.+++.+++.+
T Consensus        78 d~vi~~a~~~~~-~--------~~~~~~~~l~~aa~~~g  107 (313)
T 1qyd_A           78 DVVISALAGGVL-S--------HHILEQLKLVEAIKEAG  107 (313)
T ss_dssp             SEEEECCCCSSS-S--------TTTTTHHHHHHHHHHSC
T ss_pred             CEEEECCccccc-h--------hhHHHHHHHHHHHHhcC
Confidence            999999875421 1        13444566777777665

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=97.43  E-value=0.00014  Score=68.74  Aligned_cols=92  Identities=20%  Similarity=0.148  Sum_probs=62.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHH---HHHhcCCCCCeEEE--EeCCCchhhhhC--CCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVT---ADISHMDTGAVVRG--FLGQPQLENALT--GMD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~---~dl~~~~~~~~v~~--~~~t~d~~~al~--~AD  111 (353)
                      ++||.|+||+|++|++++..|+..|.  +|++++++.  .....   .++....  ..+..  +....++.++++  ++|
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~~~l~~~~--v~~~~~Dl~d~~~l~~~~~~~~~d   85 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR--PTYILARPGPRSPSKAKIFKALEDKG--AIIVYGLINEQEAMEKILKEHEID   85 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC--CEEEEECSSCCCHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHHHTTCC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC--CEEEEECCCCCChhHHHHHHHHHhCC--cEEEEeecCCHHHHHHHHhhCCCC
Confidence            46899999999999999999999886  899999865  11221   1232211  11111  001134567788  999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          112 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      +||.+++..             |+....++++.+++.+
T Consensus        86 ~Vi~~a~~~-------------n~~~~~~l~~aa~~~g  110 (346)
T 3i6i_A           86 IVVSTVGGE-------------SILDQIALVKAMKAVG  110 (346)
T ss_dssp             EEEECCCGG-------------GGGGHHHHHHHHHHHC
T ss_pred             EEEECCchh-------------hHHHHHHHHHHHHHcC
Confidence            999998742             5666678888888776

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=97.43  E-value=0.00015  Score=66.85  Aligned_cols=64  Identities=16%  Similarity=0.278  Sum_probs=46.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +|||+|||+ |.+|+.++..|...|+  +|.++| ++....  .+....    +.   ..++++++++++|+||++.
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~-~~~~~~--~~~~~g----~~---~~~~~~~~~~~~D~vi~~v   66 (295)
T 1yb4_A            3 AMKLGFIGL-GIMGSPMAINLARAGH--QLHVTT-IGPVAD--ELLSLG----AV---NVETARQVTEFADIIFIMV   66 (295)
T ss_dssp             -CEEEECCC-STTHHHHHHHHHHTTC--EEEECC-SSCCCH--HHHTTT----CB---CCSSHHHHHHTCSEEEECC
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhCCC--EEEEEc-CHHHHH--HHHHcC----Cc---ccCCHHHHHhcCCEEEEEC
Confidence            479999998 9999999999998887  899999 762111  122211    11   1346778889999999985

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=97.43  E-value=0.00056  Score=61.92  Aligned_cols=144  Identities=14%  Similarity=0.062  Sum_probs=79.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh--------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL--------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al--------  107 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+.. -+|   .++++        
T Consensus        15 k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           15 KTVLVTGGTKGIGHAIVEEFAGFGA--VIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTVSSMFG   90 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5899999999999999999999997  899999875  222233343221  22332211 122   22233        


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .+.|+||..+|.....   ..+   ....+..|+.....+.+.+    ++.. .+.||++|......            +
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~------------~  157 (266)
T 1xq1_A           91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV------------S  157 (266)
T ss_dssp             TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-------------------
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhcc------------C
Confidence            5789999999864321   122   2345667777666665555    4433 45666666533211            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHh
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      .+..-.++.+......+-+.+++.+
T Consensus       158 ~~~~~~Y~~sK~a~~~~~~~la~e~  182 (266)
T 1xq1_A          158 ASVGSIYSATKGALNQLARNLACEW  182 (266)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHH
Confidence            2223345554444445666677766

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.43  E-value=0.0005  Score=62.78  Aligned_cols=157  Identities=15%  Similarity=0.114  Sum_probs=82.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhc-CCCCCeEEEEeC-CCc---hhhhhC------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISH-MDTGAVVRGFLG-QPQ---LENALT------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~-~~~~~~v~~~~~-t~d---~~~al~------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.. ......+..+.. -+|   .+++++      
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            7 KVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999997  899999875  2222333411 111123332211 122   233444      


Q ss_pred             -CCcEEEEcCCCCCCC---CC----C---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCC-chhHHHHHHHHH
Q 018618          109 -GMDLVIIPAGVPRKP---GM----T---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVN-STVPIAAEVFKK  174 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~---g~----~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~-~~t~~~~~~~~~  174 (353)
                       +.|++|..+|.....   ..    +   ....+..|+.....+++.+..+-  ..+.||++|.... ..          
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~----------  154 (278)
T 1spx_A           85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLH----------  154 (278)
T ss_dssp             SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSS----------
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEeccccccc----------
Confidence             899999999864221   11    2   22345666655555554443321  1266777665432 11          


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                        +.|..-.++.+......+-+.++..+.  +..|++.++
T Consensus       155 --~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  190 (278)
T 1spx_A          155 --ATPDFPYYSIAKAAIDQYTRNTAIDLI--QHGIRVNSI  190 (278)
T ss_dssp             --CCTTSHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHHHH--hcCcEEEEE
Confidence              122222344443334455566666653  334444333

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.42  E-value=0.0014  Score=58.97  Aligned_cols=153  Identities=15%  Similarity=0.165  Sum_probs=88.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++.     ..+..+. .-+|   .++++       
T Consensus         6 gk~vlVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (247)
T 3rwb_A            6 GKTALVTGAAQGIGKAIAARLAADGA--TVIVSDINAEGAKAAAASIG-----KKARAIAADISDPGSVKALFAEIQALT   78 (247)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHC-----TTEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            35799999999999999999999998  899999876  222223331     1122211 0112   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|++|..+|.....   ..+   ....+..|+.....+++    .+++..+.+.|++++....           . .+
T Consensus        79 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~-----------~-~~  146 (247)
T 3rwb_A           79 GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTF-----------F-AG  146 (247)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH-----------H-HT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhh-----------c-cC
Confidence            3789999999865321   122   23345666655444444    4666655677777764221           0 12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .|..-.++.+......+-+.+|..++  +..|++..+
T Consensus       147 ~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v  181 (247)
T 3rwb_A          147 TPNMAAYVAAKGGVIGFTRALATELG--KYNITANAV  181 (247)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            34344455554444456677777763  344544333

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.41  E-value=0.00028  Score=60.48  Aligned_cols=136  Identities=14%  Similarity=0.087  Sum_probs=78.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhhh--hCCCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA--LTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~a--l~~ADiVI  114 (353)
                      .++|.|+|+ |.+|..++..|... |.  +++++|.++..  ...+..... ..+..  ..++   ++++  +.++|+||
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~--~V~vid~~~~~--~~~~~~~g~-~~~~g--d~~~~~~l~~~~~~~~ad~vi  110 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGK--ISLGIEIREEA--AQQHRSEGR-NVISG--DATDPDFWERILDTGHVKLVL  110 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCS--CEEEEESCHHH--HHHHHHTTC-CEEEC--CTTCHHHHHTBCSCCCCCEEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCC--eEEEEECCHHH--HHHHHHCCC-CEEEc--CCCCHHHHHhccCCCCCCEEE
Confidence            469999998 99999999999887 87  89999987622  122222211 11211  1122   3344  78999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHH
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRA  194 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~  194 (353)
                      ++.+..           ..|.    .++..+++.+|+..++..++-.+..     +.+.+. |  .+.++.-...-..++
T Consensus       111 ~~~~~~-----------~~~~----~~~~~~~~~~~~~~ii~~~~~~~~~-----~~l~~~-G--~~~vi~p~~~~a~~l  167 (183)
T 3c85_A          111 LAMPHH-----------QGNQ----TALEQLQRRNYKGQIAAIAEYPDQL-----EGLLES-G--VDAAFNIYSEAGSGF  167 (183)
T ss_dssp             ECCSSH-----------HHHH----HHHHHHHHTTCCSEEEEEESSHHHH-----HHHHHH-T--CSEEEEHHHHHHHHH
T ss_pred             EeCCCh-----------HHHH----HHHHHHHHHCCCCEEEEEECCHHHH-----HHHHHc-C--CCEEEchHHHHHHHH
Confidence            975311           2233    3344566667887777666532211     223333 3  345555444334445


Q ss_pred             HHHHHHHhCCCCC
Q 018618          195 NTFVAEVLGLDPR  207 (353)
Q Consensus       195 ~~~lA~~l~v~~~  207 (353)
                      -..+.+.++.+..
T Consensus       168 ~~~~~~~~~~~~~  180 (183)
T 3c85_A          168 ARHVCKQLEPQFT  180 (183)
T ss_dssp             HHHHHHHHCCCCC
T ss_pred             HHHHHHhcCCccc
Confidence            5555566665443

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=97.41  E-value=0.00035  Score=64.13  Aligned_cols=91  Identities=11%  Similarity=0.023  Sum_probs=58.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||+|||+ |.+|..++..|.. |+  +|.++|+++.....  +....    +...   + ++++++++|+||++...+ 
T Consensus         2 ~~i~iiG~-G~~G~~~a~~l~~-g~--~V~~~~~~~~~~~~--~~~~g----~~~~---~-~~~~~~~~D~vi~~v~~~-   66 (289)
T 2cvz_A            2 EKVAFIGL-GAMGYPMAGHLAR-RF--PTLVWNRTFEKALR--HQEEF----GSEA---V-PLERVAEARVIFTCLPTT-   66 (289)
T ss_dssp             CCEEEECC-STTHHHHHHHHHT-TS--CEEEECSSTHHHHH--HHHHH----CCEE---C-CGGGGGGCSEEEECCSSH-
T ss_pred             CeEEEEcc-cHHHHHHHHHHhC-CC--eEEEEeCCHHHHHH--HHHCC----Cccc---C-HHHHHhCCCEEEEeCCCh-
Confidence            68999999 9999999999988 87  89999987622111  11111    1111   1 356788999999985321 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  161 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  161 (353)
                                    ..+.++++.+.... ++.+|+..+|..
T Consensus        67 --------------~~~~~v~~~l~~~l~~~~~vv~~s~~~   93 (289)
T 2cvz_A           67 --------------REVYEVAEALYPYLREGTYWVDATSGE   93 (289)
T ss_dssp             --------------HHHHHHHHHHTTTCCTTEEEEECSCCC
T ss_pred             --------------HHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence                          01233445555444 567777777754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=97.41  E-value=0.0018  Score=57.57  Aligned_cols=157  Identities=16%  Similarity=0.140  Sum_probs=86.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCc-----EEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh---
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVS-----VLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL---  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~-----el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al---  107 (353)
                      ++|.|+||+|.+|.+++..|++.|...     +|+++|++.  ......++...  ...+..+.. -+|   .++++   
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHHH
Confidence            479999999999999999998877522     789999875  22233334322  223333221 122   22233   


Q ss_pred             ----CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHH
Q 018618          108 ----TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       108 ----~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                          .+.|+||..+|......   .+   ....+..|+.....+.+.+..+   ...+.++++|.....           
T Consensus        81 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-----------  149 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT-----------  149 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-----------
T ss_pred             HHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhc-----------
Confidence                37999999998653211   12   3344566766665555554322   234667776653221           


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                       .+.+..-.++.+......+-+.++..+.  +..+++.++
T Consensus       150 -~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  186 (244)
T 2bd0_A          150 -KAFRHSSIYCMSKFGQRGLVETMRLYAR--KCNVRITDV  186 (244)
T ss_dssp             -SCCTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEE
T ss_pred             -CCCCCCchhHHHHHHHHHHHHHHHHHhh--ccCcEEEEE
Confidence             1233333445444344445566666653  344544433

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.41  E-value=0.00013  Score=57.32  Aligned_cols=71  Identities=27%  Similarity=0.374  Sum_probs=48.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe--CCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL--GQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~--~t~d~~~al~~ADiVIi~a  117 (353)
                      ++||+|+|+ |.+|+.++..|...| .  +|+++|+++....  .+.+..  .......  ...+++++++++|+||.++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~--~v~~~~r~~~~~~--~~~~~~--~~~~~~d~~~~~~~~~~~~~~d~vi~~~   77 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNY--SVTVADHDLAALA--VLNRMG--VATKQVDAKDEAGLAKALGGFDAVISAA   77 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSE--EEEEEESCHHHHH--HHHTTT--CEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCc--eEEEEeCCHHHHH--HHHhCC--CcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence            469999999 999999999999888 5  8999998752211  222211  1221111  1124556789999999987


Q ss_pred             C
Q 018618          118 G  118 (353)
Q Consensus       118 g  118 (353)
                      +
T Consensus        78 ~   78 (118)
T 3ic5_A           78 P   78 (118)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.40  E-value=0.00032  Score=64.95  Aligned_cols=65  Identities=14%  Similarity=0.354  Sum_probs=48.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +|||+|||+ |.+|..++..|...|+  +|.++|+++.  ....+.+..    +..   .++++++++++|+||++.
T Consensus         4 ~~~i~iiG~-G~~G~~~a~~l~~~g~--~V~~~~~~~~--~~~~~~~~g----~~~---~~~~~~~~~~~D~vi~~v   68 (301)
T 3cky_A            4 SIKIGFIGL-GAMGKPMAINLLKEGV--TVYAFDLMEA--NVAAVVAQG----AQA---CENNQKVAAASDIIFTSL   68 (301)
T ss_dssp             CCEEEEECC-CTTHHHHHHHHHHTTC--EEEEECSSHH--HHHHHHTTT----CEE---CSSHHHHHHHCSEEEECC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCC--eEEEEeCCHH--HHHHHHHCC----Cee---cCCHHHHHhCCCEEEEEC
Confidence            579999998 9999999999998887  8999998652  222233321    222   246778889999999985

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=97.40  E-value=0.00092  Score=61.26  Aligned_cols=155  Identities=15%  Similarity=0.112  Sum_probs=88.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++....  ..+..+. .-+|   .++++       .
T Consensus        23 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           23 EVALVTGATSGIGLEIARRLGKEGL--RVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999997  899999876  222233443221  2222221 1122   22223       3


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhh-----CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-----CPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~-----~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..+|......   .+   ....+..|+.....+++.+...     ...+.||++|.....            .+
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~------------~~  166 (277)
T 2rhc_B           99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK------------QG  166 (277)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGT------------SC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccc------------cC
Confidence            7899999998653211   22   2345677887777777665443     124667776643211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.++..+.  +..|++.++
T Consensus       167 ~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v  201 (277)
T 2rhc_B          167 VVHAAPYSASKHGVVGFTKALGLELA--RTGITVNAV  201 (277)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHT--TTEEEEEEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHH--HhCcEEEEE
Confidence            23223344443334456666777764  344544444

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.40  E-value=0.00019  Score=64.99  Aligned_cols=143  Identities=13%  Similarity=0.015  Sum_probs=80.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++..  .....++.     ..+..+. .-+|   .+++++       
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            8 RVFIVTGASSGLGAAVTRMLAQEGA--TVLGLDLKPPAGEEPAAELG-----AAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHhC-----CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999998  8999998762  22222221     1112111 1122   223333       


Q ss_pred             CCcEEEEcCCCCCCC-------CCC---HHHHHHHHHHHHHHHHHHHHhh---------CCCcEEEEecCCCCchhHHHH
Q 018618          109 GMDLVIIPAGVPRKP-------GMT---RDDLFNINAGIVRTLCEGIAKC---------CPNATVNLISNPVNSTVPIAA  169 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~-------g~~---r~~~~~~N~~i~~~i~~~i~~~---------~p~a~viv~tNPv~~~t~~~~  169 (353)
                      ..|++|..+|.....       ..+   ....+..|+.....+.+.+..+         ...+.||++|....       
T Consensus        81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~-------  153 (257)
T 3tpc_A           81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA-------  153 (257)
T ss_dssp             CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH-------
T ss_pred             CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh-------
Confidence            899999999865321       112   2344566766555555554433         23466777664221       


Q ss_pred             HHHHHhCCCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          170 EVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       170 ~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                          . .+.+..-.++.+......+-+.+|+.++
T Consensus       154 ----~-~~~~~~~~Y~asKaa~~~~~~~la~e~~  182 (257)
T 3tpc_A          154 ----F-DGQIGQAAYAASKGGVAALTLPAARELA  182 (257)
T ss_dssp             ----H-HCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----c-cCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence                0 1233334455554444456677777763

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=97.39  E-value=0.0016  Score=59.44  Aligned_cols=118  Identities=18%  Similarity=0.185  Sum_probs=70.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh------
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL------  107 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al------  107 (353)
                      ..++|.|+||+|.+|..++..|++.|.  +|+++|++.  ......++....  ..+..+.. -+|   .++++      
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEEcCHHHHHHHHHHHHhcC--CeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999997  899999876  222333343321  22332211 122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---C---CHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCC
Q 018618          108 -TGMDLVIIPAGVPRKPG---M---TRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPV  161 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~g---~---~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv  161 (353)
                       .+.|+||..+|......   .   .....+..|+.....+.+.+..+   ...+.||++|...
T Consensus       106 ~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~  169 (272)
T 1yb1_A          106 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAA  169 (272)
T ss_dssp             TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             CCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechh
Confidence             37899999998653221   1   12345566766644444443322   2356677776543

>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}

Probab=97.39  E-value=0.00033  Score=65.57  Aligned_cols=119  Identities=10%  Similarity=0.097  Sum_probs=71.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----TGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +|||+|||+ |.+|+.++..|. .|.  +|.++++++....  .+....    ..........+.+ .++..++|+||++
T Consensus         2 ~mkI~IiGa-Ga~G~~~a~~L~-~g~--~V~~~~r~~~~~~--~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~~D~vila   74 (307)
T 3ego_A            2 SLKIGIIGG-GSVGLLCAYYLS-LYH--DVTVVTRRQEQAA--AIQSEGIRLYKGGEEFRADCSAD-TSINSDFDLLVVT   74 (307)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHH-TTS--EEEEECSCHHHHH--HHHHHCEEEEETTEEEEECCEEE-SSCCSCCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHh-cCC--ceEEEECCHHHHH--HHHhCCceEecCCCeeccccccc-ccccCCCCEEEEE
Confidence            479999999 999999999999 776  9999998752111  121110    0000000000111 2456899999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhh
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD  190 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld  190 (353)
                      ....                -+.++++.++...++. |+.+.|-++..-     .+.+  .+|.+++++- +...
T Consensus        75 vK~~----------------~~~~~l~~l~~~~~~~-ivs~~nGi~~~e-----~l~~--~~~~~~vl~g~~~~~  125 (307)
T 3ego_A           75 VKQH----------------QLQSVFSSLERIGKTN-ILFLQNGMGHIH-----DLKD--WHVGHSIYVGIVEHG  125 (307)
T ss_dssp             CCGG----------------GHHHHHHHTTSSCCCE-EEECCSSSHHHH-----HHHT--CCCSCEEEEEEECCE
T ss_pred             eCHH----------------HHHHHHHHhhcCCCCe-EEEecCCccHHH-----HHHH--hCCCCcEEEEEEeec
Confidence            5311                1345556666555666 777788876432     2233  2677888754 5443

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.39  E-value=0.00026  Score=66.26  Aligned_cols=110  Identities=13%  Similarity=0.071  Sum_probs=62.7

Q ss_pred             ccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc
Q 018618           23 LQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ  102 (353)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d  102 (353)
                      |-..++.....|.. ....|||+|||+ |.+|+.++..|...|+  +|.++|+++....  .+....    +..   .++
T Consensus        13 ~~~~~~~~~~~~~~-~~~~~~I~iIG~-G~mG~~~a~~l~~~g~--~V~~~~~~~~~~~--~~~~~g----~~~---~~~   79 (316)
T 2uyy_A           13 LGTENLYFQSMGSI-TPTDKKIGFLGL-GLMGSGIVSNLLKMGH--TVTVWNRTAEKCD--LFIQEG----ARL---GRT   79 (316)
T ss_dssp             ------------CC-CCCSSCEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSGGGGH--HHHHTT----CEE---CSC
T ss_pred             ccccceeecCCCCC-CCCCCeEEEEcc-cHHHHHHHHHHHhCCC--EEEEEeCCHHHHH--HHHHcC----CEE---cCC
Confidence            33344444444443 223579999998 9999999999998887  8999998762211  122211    122   245


Q ss_pred             hhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCC
Q 018618          103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNP  160 (353)
Q Consensus       103 ~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP  160 (353)
                      ++++++++|+||++...+               ..+++++..+    ....|+.+|+..+|-
T Consensus        80 ~~~~~~~~DvVi~av~~~---------------~~~~~v~~~~~~~~~~l~~~~~vv~~s~~  126 (316)
T 2uyy_A           80 PAEVVSTCDITFACVSDP---------------KAAKDLVLGPSGVLQGIRPGKCYVDMSTV  126 (316)
T ss_dssp             HHHHHHHCSEEEECCSSH---------------HHHHHHHHSTTCGGGGCCTTCEEEECSCC
T ss_pred             HHHHHhcCCEEEEeCCCH---------------HHHHHHHcCchhHhhcCCCCCEEEECCCC
Confidence            678889999999985311               1123344332    223467777777773

>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*

Probab=97.39  E-value=0.00065  Score=65.82  Aligned_cols=97  Identities=14%  Similarity=0.130  Sum_probs=59.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCCc-HHHHHH-HhcCC------CCCe--EE--E-E-eCCCchhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNT-PGVTAD-ISHMD------TGAV--VR--G-F-LGQPQLEN  105 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~~-~~~~~d-l~~~~------~~~~--v~--~-~-~~t~d~~~  105 (353)
                      +|||+|||+ |.+|..++..|+. .|+  +|.++|..+. ...... +....      ....  ..  . . ..++|+++
T Consensus         2 ~mkI~ViGa-G~~G~~~a~~La~~~G~--~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (404)
T 3c7a_A            2 TVKVCVCGG-GNGAHTLSGLAASRDGV--EVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVITKDPEI   78 (404)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTSTTE--EEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEESCHHH
T ss_pred             CceEEEECC-CHHHHHHHHHHHhCCCC--EEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEeCCHHH
Confidence            379999999 9999999999987 477  9999993321 112222 22111      0001  11  0 0 02357778


Q ss_pred             hhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEE
Q 018618          106 ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNL  156 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv  156 (353)
                      ++++||+||++....                ...++++.+..+. |+.+|+.
T Consensus        79 a~~~aD~Vilav~~~----------------~~~~v~~~l~~~l~~~~ivv~  114 (404)
T 3c7a_A           79 AISGADVVILTVPAF----------------AHEGYFQAMAPYVQDSALIVG  114 (404)
T ss_dssp             HHTTCSEEEECSCGG----------------GHHHHHHHHTTTCCTTCEEEE
T ss_pred             HhCCCCEEEEeCchH----------------HHHHHHHHHHhhCCCCcEEEE
Confidence            899999999986322                0346667777665 4665544

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.39  E-value=0.0016  Score=59.32  Aligned_cols=157  Identities=13%  Similarity=0.135  Sum_probs=89.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---h---hhhCCCcE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---E---NALTGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~---~al~~ADi  112 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++........+..+. .-+|.   +   +.+...|+
T Consensus        11 k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A           11 KTALVTGSTAGIGKAIATSLVAEGA--NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            4788999999999999999999998  899999876  233333443221112333221 11222   1   22347899


Q ss_pred             EEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618          113 VIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  182 (353)
Q Consensus       113 VIi~ag~~~~~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k  182 (353)
                      +|..+|......   .+   ....+..|+..    .+.+.+.+.+. ..+.||+++......            +.+..-
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------~~~~~~  155 (267)
T 3t4x_A           89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER-KEGRVIFIASEAAIM------------PSQEMA  155 (267)
T ss_dssp             EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TEEEEEEECCGGGTS------------CCTTCH
T ss_pred             EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEEcchhhcc------------CCCcch
Confidence            999998653221   22   23346677666    44445555433 456677665432211            223333


Q ss_pred             eEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          183 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       183 viG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .++.+......+-+.+|..++  +..|++..+.
T Consensus       156 ~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v~  186 (267)
T 3t4x_A          156 HYSATKTMQLSLSRSLAELTT--GTNVTVNTIM  186 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT--TSEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhC--CCCeEEEEEe
Confidence            344444444556677777764  4455554444

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.39  E-value=0.0034  Score=56.67  Aligned_cols=157  Identities=14%  Similarity=0.095  Sum_probs=89.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++...  ...+..+. .-+|   .++++       
T Consensus         9 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            9 GCTALVTGGSRGIGYGIVEELASLGA--SVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999997  899999876  22233334322  12333321 1122   22223       


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                       ...|++|..+|.....   ..+   ....+..|+.....+++.+..+   ...+.||++|.....            .+
T Consensus        85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~  152 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA------------LA  152 (260)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT------------SC
T ss_pred             CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhc------------cC
Confidence             5799999999865321   122   2345566766655555554321   234667766643211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+......+-+.+++.++  +..|++.++.
T Consensus       153 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~  188 (260)
T 2ae2_A          153 VPYEAVYGATKGAMDQLTRCLAFEWA--KDNIRVNGVG  188 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEE
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHHh--hcCcEEEEEe
Confidence            33333445544444556677777763  3445554443

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.38  E-value=0.00069  Score=60.37  Aligned_cols=143  Identities=17%  Similarity=0.148  Sum_probs=81.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCc---hhhhhC---CCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQ---LENALT---GMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d---~~~al~---~ADiV  113 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++..  .....++.    ...... ..-+|   .+++++   ..|+|
T Consensus         8 k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~----~~~~~~-~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            8 RRVLVTGAGKGIGRGTVQALHATGA--RVVAVSRTQADLDSLVRECP----GIEPVC-VDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHST----TCEEEE-CCTTCHHHHHHHHTTCCCCCEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcC----CCCEEE-EeCCCHHHHHHHHHHcCCCCEE
Confidence            4899999999999999999999987  8999998752  11111111    111111 11122   333343   57999


Q ss_pred             EEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHh----hCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          114 IIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       114 Ii~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      |..+|......   .+   ....+..|+.....+.+.+..    ....+.|+++|.....            .+.++.-.
T Consensus        81 i~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~------------~~~~~~~~  148 (244)
T 3d3w_A           81 VNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ------------RAVTNHSV  148 (244)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------------SCCTTBHH
T ss_pred             EECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhc------------cCCCCCch
Confidence            99998653211   12   234566777665555554443    3325667776653221            12333334


Q ss_pred             EeechhhHHHHHHHHHHHhC
Q 018618          184 LGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~  203 (353)
                      ++.+......+-+.+++.++
T Consensus       149 Y~~sK~a~~~~~~~la~e~~  168 (244)
T 3d3w_A          149 YCSTKGALDMLTKVMALELG  168 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHHhc
Confidence            55554444556666777663

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.38  E-value=0.0013  Score=59.38  Aligned_cols=114  Identities=19%  Similarity=0.298  Sum_probs=68.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+. .-+|   .+++++       
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLG   78 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3789999999999999999999997  899999876  223333443221  2222221 1123   223333       


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ..|++|..+|.....   ..+   ....+..|+..    .+.+.+.+.+..+.+.||++|.
T Consensus        79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS  139 (256)
T 1geg_A           79 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACS  139 (256)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECc
Confidence            799999999864321   122   22345566554    4445555554443567777654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.38  E-value=0.00085  Score=60.95  Aligned_cols=114  Identities=18%  Similarity=0.198  Sum_probs=69.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------  108 (353)
                      .++|.|+||+|.+|.+++..|+..|.  +|+++|++..  .....++...   ..+..+.. -+|   ++++++      
T Consensus        16 ~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           16 DKVAIITGGAGGIGETTAKLFVRYGA--KVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCChhHHHHHHHHhCCC---CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            34899999999999999999999997  8999998752  2222233211   12332211 122   223333      


Q ss_pred             -CCcEEEEcCCCCCC-----CCCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          109 -GMDLVIIPAGVPRK-----PGMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       109 -~ADiVIi~ag~~~~-----~g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                       +.|+||..+|....     ...+   ..+.+..|+.....+.+.+..+   ...+.||++|.
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS  153 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTAS  153 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEee
Confidence             78999999986431     1122   2345667776666666655543   23466776654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=97.38  E-value=0.00097  Score=60.28  Aligned_cols=156  Identities=15%  Similarity=0.180  Sum_probs=86.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+. .-+|   .++++       
T Consensus        14 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           14 NKVALVTASTDGIGLAIARRLAQDGA--HVVVSSRKQENVDRTVATLQGEG--LSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999997  999999876  222333443321  2222221 1122   22233       


Q ss_pred             CCCcEEEEcCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          108 TGMDLVIIPAGVPRK--P--GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~--~--g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      .+.|++|..+|....  +  ..+   ....+..|+.....+.+.    +++. ..+.||++|.....            .
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~------------~  156 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKR-GGGSVLIVSSVGAY------------H  156 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGT------------S
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEechhhc------------C
Confidence            389999999986421  1  122   234556676665555444    4333 34566666542211            1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +.+..-.++.+......+-+.+++.++  +..|++.++.
T Consensus       157 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~  193 (260)
T 2zat_A          157 PFPNLGPYNVSKTALLGLTKNLAVELA--PRNIRVNCLA  193 (260)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEE
Confidence            222223344444344456667777763  3445544444

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.37  E-value=0.0011  Score=62.36  Aligned_cols=116  Identities=16%  Similarity=0.111  Sum_probs=67.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++........+..+. .-+|   .++++       .
T Consensus         9 k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            9 RTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             CEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            4799999999999999999999998  899999976  222333333211111333321 1122   22233       3


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHH----HHHHHhh-----CCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTL----CEGIAKC-----CPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i----~~~i~~~-----~p~a~viv~tN  159 (353)
                      ..|++|.+||......   .+   ....+..|+.....+    .+.+.+.     ...+.|+++|.
T Consensus        87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS  152 (319)
T 3ioy_A           87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTAS  152 (319)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECC
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecc
Confidence            6699999998643211   12   234556665554444    4444433     13566776664

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.37  E-value=0.0007  Score=61.87  Aligned_cols=143  Identities=22%  Similarity=0.269  Sum_probs=83.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCc---hhhhhC-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ---LENALT-------G  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d---~~~al~-------~  109 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++.. .  ...... .-+|   .+++++       .
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~--~~~~~~-Dv~~~~~v~~~~~~~~~~~g~   85 (271)
T 3tzq_B           12 KVAIITGACGGIGLETSRVLARAGA--RVVLADLPETDLAGAAASVGR-G--AVHHVV-DLTNEVSVRALIDFTIDTFGR   85 (271)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSCHHHHHHHHCT-T--CEEEEC-CTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhCC-C--eEEEEC-CCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999998  899999987  3333333311 1  111110 1122   223333       7


Q ss_pred             CcEEEEcCCCCCC-C----CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          110 MDLVIIPAGVPRK-P----GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       110 ADiVIi~ag~~~~-~----g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .|++|..+|.... .    ..+   ....+..|+.....+++.+    .+. ..+.|+++|.....            .+
T Consensus        86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~------------~~  152 (271)
T 3tzq_B           86 LDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSATAH------------AA  152 (271)
T ss_dssp             CCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGT------------SB
T ss_pred             CCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECCHHHc------------CC
Confidence            8999999986522 1    122   2345667776666665555    433 45667776643211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhC
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      .+..-.++.+......+-+.+|..++
T Consensus       153 ~~~~~~Y~asKaa~~~l~~~la~e~~  178 (271)
T 3tzq_B          153 YDMSTAYACTKAAIETLTRYVATQYG  178 (271)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHh
Confidence            33333444444444456677777753

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=97.37  E-value=0.00078  Score=61.38  Aligned_cols=69  Identities=12%  Similarity=0.003  Sum_probs=48.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCchhhhhCCCcEEEEcCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d~~~al~~ADiVIi~ag~  119 (353)
                      +|||.|+|| |++|++++..|...|+  +|+.++++.....  .+...    .++.+.. -+|++  ++++|+||++++.
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~----~~~~~~~D~~d~~--~~~~d~vi~~a~~   73 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGW--RIIGTSRNPDQME--AIRAS----GAEPLLWPGEEPS--LDGVTHLLISTAP   73 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTC--EEEEEESCGGGHH--HHHHT----TEEEEESSSSCCC--CTTCCEEEECCCC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCC--EEEEEEcChhhhh--hHhhC----CCeEEEecccccc--cCCCCEEEECCCc
Confidence            369999998 9999999999999887  9999998763221  12221    1222211 23443  8999999999875


Q ss_pred             C
Q 018618          120 P  120 (353)
Q Consensus       120 ~  120 (353)
                      .
T Consensus        74 ~   74 (286)
T 3ius_A           74 D   74 (286)
T ss_dssp             B
T ss_pred             c
Confidence            4

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=97.37  E-value=0.00044  Score=71.45  Aligned_cols=167  Identities=15%  Similarity=0.090  Sum_probs=97.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-Cc----hhhhhCCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ----LENALTGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~d----~~~al~~ADiV  113 (353)
                      .+|+|.|+||+|++|++++..|+.. |.  +|+++|++....  .++..   ...+..+... +|    ++++++++|+|
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~--~V~~~~r~~~~~--~~~~~---~~~v~~v~~Dl~d~~~~~~~~~~~~D~V  386 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHY--EVYGLDIGSDAI--SRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVV  386 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSE--EEEEEESCCTTT--GGGTT---CTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCC--EEEEEEcCchhh--hhhcc---CCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence            4578999999999999999999887 66  899999875211  01111   1223332211 12    34467899999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCC-------CCCCce
Q 018618          114 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGT-------YDPKKL  183 (353)
Q Consensus       114 Ii~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~-------~~~~kv  183 (353)
                      |++|+.....  ..+..+.+..|+.....+++.+.+..  ..++++|.. +.....  ...+.....       .++...
T Consensus       387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~--~~~~~E~~~~~~~~p~~~p~~~  462 (660)
T 1z7e_A          387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCS--DKYFDEDHSNLIVGPVNKPRWI  462 (660)
T ss_dssp             EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCC--SSSBCTTTCCEEECCTTCTTHH
T ss_pred             EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCC--CcccCCCccccccCcccCCCCC
Confidence            9998865321  12345567789999999999998875  455555532 100000  000000000       011224


Q ss_pred             EeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          184 LGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      +|.+.....++-..+++..|++..-++ +.++|..
T Consensus       463 Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~  497 (660)
T 1z7e_A          463 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPR  497 (660)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTT
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCC
Confidence            555555555565666666777655554 5677754

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.36  E-value=0.00035  Score=63.05  Aligned_cols=147  Identities=15%  Similarity=0.120  Sum_probs=80.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCC-----CCCeEEEEeC-CCc---hhhhhCC-
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMD-----TGAVVRGFLG-QPQ---LENALTG-  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~-----~~~~v~~~~~-t~d---~~~al~~-  109 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++..  .....++....     ....+..+.. -+|   +++++++ 
T Consensus         8 k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            8 ALALVTGAGSGIGRAVSVRLAGEGA--TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4899999999999999999999987  8999998752  22222221110     0012222211 122   2233333 


Q ss_pred             ------C-cEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh----CCCcEEEEecCCCCchhHHHHHHH
Q 018618          110 ------M-DLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC----CPNATVNLISNPVNSTVPIAAEVF  172 (353)
Q Consensus       110 ------A-DiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~----~p~a~viv~tNPv~~~t~~~~~~~  172 (353)
                            . |+||..+|.....   ..+   ....+..|+.....+.+.+..+    ...+.||++|....          
T Consensus        86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~----------  155 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVG----------  155 (264)
T ss_dssp             HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHH----------
T ss_pred             HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhh----------
Confidence                  3 9999999865321   112   3345566766666665555443    32466776665211          


Q ss_pred             HHhCCCCCCceEeechhhHHHHHHHHHHHh
Q 018618          173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                       . .+.+..-.++.+......+-..+++.+
T Consensus       156 -~-~~~~~~~~Y~~sK~a~~~~~~~la~e~  183 (264)
T 2pd6_A          156 -K-VGNVGQTNYAASKAGVIGLTQTAAREL  183 (264)
T ss_dssp             -H-HCCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -c-cCCCCChhhHHHHHHHHHHHHHHHHHh
Confidence             0 123333344554444445556666665

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.36  E-value=0.00075  Score=61.28  Aligned_cols=156  Identities=13%  Similarity=0.154  Sum_probs=91.0

Q ss_pred             CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCc---hhhhhC-------
Q 018618           42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d---~~~al~-------  108 (353)
                      +++.|+||+  |.+|.+++..|++.|.  +|+++|++. ......++........... ..-+|   .+++++       
T Consensus        10 k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~-~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A           10 KRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQ-CDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             CEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEE-CCTTCHHHHHHHHHHHHTTCS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEcCcHHHHHHHHHHHHhcCCcEEEE-ccCCCHHHHHHHHHHHHHHcC
Confidence            479999998  8999999999999997  899999876 2233333322110111111 11122   222332       


Q ss_pred             CCcEEEEcCCCCCC-----C--C-CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          109 GMDLVIIPAGVPRK-----P--G-MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-----~--g-~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      ..|++|..+|....     +  . .+   ....+..|+.....+++.+..+- +.+.||++|.....            .
T Consensus        87 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------------~  154 (265)
T 1qsg_A           87 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE------------R  154 (265)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT------------S
T ss_pred             CCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhc------------c
Confidence            67999999986532     1  1 22   33456778888888888877653 24667777642211            1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +.|..-.++.+......+-+.+++.++  +..|++.++
T Consensus       155 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  190 (265)
T 1qsg_A          155 AIPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAI  190 (265)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            233333455554444556677777774  344544433

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.36  E-value=0.00079  Score=59.74  Aligned_cols=154  Identities=16%  Similarity=0.120  Sum_probs=85.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCC----cEEEE
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRG-FLGQPQLENALTGM----DLVII  115 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~A----DiVIi  115 (353)
                      +|.|+||+|.+|.+++..|+..|.  +|++.|+++.  .....++.. .. ..+.. .....+.+++++..    |++|.
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~-~~~~~D~~~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGK--ATYLTGRSESKLSTVTNCLSN-NV-GYRARDLASHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHHTCSS-CC-CEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhh-cc-CeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence            689999999999999999999997  8999998762  222222210 10 11111 10111233334333    89999


Q ss_pred             cCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-C-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618          116 PAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-P-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       116 ~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      .+|......   .+   ....+..|+.....+.+.+..+- . ...+|+++.....            .+.+..-.++.+
T Consensus        79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~------------~~~~~~~~Y~as  146 (230)
T 3guy_A           79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQ------------QPKAQESTYCAV  146 (230)
T ss_dssp             CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGT------------SCCTTCHHHHHH
T ss_pred             eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccC------------CCCCCCchhHHH
Confidence            998653221   22   23456677776666666655442 1 2356665542211            123333344554


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ......+-+.+++.++  +..|++..+
T Consensus       147 Kaa~~~~~~~la~e~~--~~gi~v~~v  171 (230)
T 3guy_A          147 KWAVKGLIESVRLELK--GKPMKIIAV  171 (230)
T ss_dssp             HHHHHHHHHHHHHHTT--TSSCEEEEE
T ss_pred             HHHHHHHHHHHHHHHH--hcCeEEEEE
Confidence            4444567777888874  444544433

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=97.36  E-value=0.00076  Score=61.67  Aligned_cols=155  Identities=19%  Similarity=0.208  Sum_probs=86.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|++.|.+.   ......++....  ..+..+. .-+|   .++++      
T Consensus        28 ~k~vlVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~~~~  103 (269)
T 4dmm_A           28 DRIALVTGASRGIGRAIALELAAAGA--KVAVNYASSAGAADEVVAAIAAAG--GEAFAVKADVSQESEVEALFAAVIER  103 (269)
T ss_dssp             TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            34788999999999999999999998  889998854   222333343322  2222221 1123   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          108 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                       ...|++|..||......   .+   ....+..|+.....+.+.    +.+. ..+.||++|.-.       .    . .
T Consensus       104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~-------~----~-~  170 (269)
T 4dmm_A          104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQ-RSGRIINIASVV-------G----E-M  170 (269)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCHH-------H----H-H
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECchh-------h----c-C
Confidence             37899999998653221   22   233456676554444444    4443 345666665311       0    1 1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +.+..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       171 ~~~~~~~Y~asK~a~~~l~~~la~e~~--~~gi~vn~v  206 (269)
T 4dmm_A          171 GNPGQANYSAAKAGVIGLTKTVAKELA--SRGITVNAV  206 (269)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHh--hhCcEEEEE
Confidence            233334455554444556677777763  334544433

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=97.36  E-value=0.00032  Score=64.61  Aligned_cols=76  Identities=21%  Similarity=0.236  Sum_probs=50.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-------cHHH-HHHHhcCCCCCeE-EE-EeCCCchhhhhCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-------TPGV-TADISHMDTGAVV-RG-FLGQPQLENALTGM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-------~~~~-~~dl~~~~~~~~v-~~-~~~t~d~~~al~~A  110 (353)
                      ++||.|+||+|++|++++..|+..|.  +|++++++.       .+.. ..++....  ..+ .. +....++.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~~~~~~~~~l~~~~--v~~v~~D~~d~~~l~~~~~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN--PTYALVRKTITAANPETKEELIDNYQSLG--VILLEGDINDHETLVKAIKQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC--CEEEEECCSCCSSCHHHHHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC--cEEEEECCCcccCChHHHHHHHHHHHhCC--CEEEEeCCCCHHHHHHHHhCC
Confidence            46899999999999999999988886  888888874       1111 11222211  111 11 11112456788999


Q ss_pred             cEEEEcCCCC
Q 018618          111 DLVIIPAGVP  120 (353)
Q Consensus       111 DiVIi~ag~~  120 (353)
                      |+||.+++..
T Consensus        78 d~vi~~a~~~   87 (307)
T 2gas_A           78 DIVICAAGRL   87 (307)
T ss_dssp             SEEEECSSSS
T ss_pred             CEEEECCccc
Confidence            9999998754

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.35  E-value=0.001  Score=59.29  Aligned_cols=98  Identities=17%  Similarity=0.193  Sum_probs=62.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII  115 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi  115 (353)
                      +++|.|+||+|++|+.++..|+..| .  +|+++++++..     +.... ...+..+..    ..+++++++++|+||.
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~--~V~~~~R~~~~-----~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~   94 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTI--KQTLFARQPAK-----IHKPY-PTNSQIIMGDVLNHAALKQAMQGQDIVYA   94 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTE--EEEEEESSGGG-----SCSSC-CTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCc--eEEEEEcChhh-----hcccc-cCCcEEEEecCCCHHHHHHHhcCCCEEEE
Confidence            4589999999999999999999988 6  89999987521     11111 112232211    1345677899999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +++..     . .+      ...+.+++.+++.... .+|++|.
T Consensus        95 ~a~~~-----~-~~------~~~~~~~~~~~~~~~~-~iV~iSS  125 (236)
T 3qvo_A           95 NLTGE-----D-LD------IQANSVIAAMKACDVK-RLIFVLS  125 (236)
T ss_dssp             ECCST-----T-HH------HHHHHHHHHHHHTTCC-EEEEECC
T ss_pred             cCCCC-----c-hh------HHHHHHHHHHHHcCCC-EEEEEec
Confidence            87642     1 11      1244667777766533 4555543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=97.35  E-value=0.0012  Score=62.69  Aligned_cols=104  Identities=16%  Similarity=0.149  Sum_probs=66.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-----CchhhhhCCCcEEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-----PQLENALTGMDLVII  115 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-----~d~~~al~~ADiVIi  115 (353)
                      +++|.|+||+|++|++++..|+..|.  +|++++++.......++...   ..+..+...     .++.++++++|+||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~R~~~~~~~~~l~~~---~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~   79 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH--HVRAQVHSLKGLIAEELQAI---PNVTLFQGPLLNNVPLMDTLFEGAHLAFI   79 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCSCSHHHHHHHTS---TTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCCChhhHHHHhhc---CCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence            46899999999999999999988886  88999987632222334321   122222111     235677899999998


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCC
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  160 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  160 (353)
                      .++...   .      ..|... +.+++.+++.. .. .+|.+|..
T Consensus        80 ~a~~~~---~------~~~~~~-~~l~~aa~~~g~v~-~~V~~SS~  114 (352)
T 1xgk_A           80 NTTSQA---G------DEIAIG-KDLADAAKRAGTIQ-HYIYSSMP  114 (352)
T ss_dssp             CCCSTT---S------CHHHHH-HHHHHHHHHHSCCS-EEEEEECC
T ss_pred             cCCCCC---c------HHHHHH-HHHHHHHHHcCCcc-EEEEeCCc
Confidence            765321   1      234544 77888887775 33 45555543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=97.35  E-value=0.00018  Score=65.61  Aligned_cols=101  Identities=13%  Similarity=0.111  Sum_probs=61.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhC--CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~--~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ||.|+||+|++|++++..|+..  |.  +|++++++.....  ++..... ..+.. +....++.++++++|+||++++.
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~--~V~~~~r~~~~~~--~~~~~~~-~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   75 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS--QIVAIVRNPAKAQ--ALAAQGI-TVRQADYGDEAALTSALQGVEKLLLISSS   75 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG--GEEEEESCTTTCH--HHHHTTC-EEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc--eEEEEEcChHhhh--hhhcCCC-eEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence            5899999999999999999887  65  8999998762211  1211110 01111 00112456788999999999874


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..          ..|+...+.+++.+++....-+|.+.|
T Consensus        76 ~~----------~~~~~~~~~l~~a~~~~~~~~~v~~Ss  104 (286)
T 2zcu_A           76 EV----------GQRAPQHRNVINAAKAAGVKFIAYTSL  104 (286)
T ss_dssp             ----------------CHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             Cc----------hHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            31          146777888888888775443443333

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=97.35  E-value=0.00032  Score=62.89  Aligned_cols=156  Identities=16%  Similarity=0.187  Sum_probs=88.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------  107 (353)
                      .+++.|+||+|.+|.+++..|+..|.  +|+++|+++  ......++....  ..+..+. .-+|.   ++.+       
T Consensus         5 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (247)
T 3lyl_A            5 EKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAEN   80 (247)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            34789999999999999999999997  899999876  233333443322  2333221 11222   2222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ...|++|..+|.....   ..+   ....+..|+.....+.+.+...   .+.+.++++|.....            .+.
T Consensus        81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~~~  148 (247)
T 3lyl_A           81 LAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGS------------AGN  148 (247)
T ss_dssp             CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH------------HCC
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhc------------cCC
Confidence            2579999999875322   112   2345566765555554443322   234667776653210            124


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      |..-.++.+......+-+.+++.+.  +..|++..+
T Consensus       149 ~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  182 (247)
T 3lyl_A          149 PGQTNYCAAKAGVIGFSKSLAYEVA--SRNITVNVV  182 (247)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHH--HcCeEEEEE
Confidence            4444555554444556677777763  334544433

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=97.35  E-value=0.0043  Score=57.51  Aligned_cols=148  Identities=18%  Similarity=0.176  Sum_probs=85.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---h-------hhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NAL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~al  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.... ...+..+. .-+|.   +       +.+
T Consensus        41 ~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           41 ARSVLVTGGTKGIGRGIATVFARAGA--NVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            35788999999999999999999998  999999887  344444554432 12333321 11232   1       223


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|++|..||.....   ..+   ....+..|+.....+++.+    ++.. .+.||+++.-....           .+
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~-----------~~  185 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPV-----------TG  185 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTT-----------BB
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhcc-----------CC
Confidence            4679999999864321   223   2344566766655555554    4443 35566665433211           12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhC
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      .+..-.++.+......+-+.+|+.++
T Consensus       186 ~~~~~~Y~asKaa~~~l~~~la~e~~  211 (293)
T 3rih_A          186 YPGWSHYGASKAAQLGFMRTAAIELA  211 (293)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            33333444444444556677777763

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.34  E-value=0.0017  Score=58.65  Aligned_cols=114  Identities=11%  Similarity=0.093  Sum_probs=69.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++...  ...+..+. .-+|   .++++       .
T Consensus         7 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            7 KVVIITGGSSGMGKGMATRFAKEGA--RVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999998  899999876  23333444432  12333321 1122   22223       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  159 (353)
                      ..|++|..+|.....   ..+   ....+..|+.....+.+.+    .+....+.|++++.
T Consensus        83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS  143 (257)
T 3imf_A           83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVA  143 (257)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECc
Confidence            789999999864321   122   2334566766555554444    34455667777654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=97.34  E-value=0.00029  Score=65.51  Aligned_cols=90  Identities=17%  Similarity=0.180  Sum_probs=58.4

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HH-HHHHHhcCCCCCeEEE--EeCCCchhhhhCCCcEEEEcCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PG-VTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~-~~~dl~~~~~~~~v~~--~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ||.|+||+|++|++++..|+..|.  +|++++++.. .. ...++....  ..+..  +....++.++++++|+||.+++
T Consensus        13 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~l~~~~--v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~   88 (318)
T 2r6j_A           13 KILIFGGTGYIGNHMVKGSLKLGH--PTYVFTRPNSSKTTLLDEFQSLG--AIIVKGELDEHEKLVELMKKVDVVISALA   88 (318)
T ss_dssp             CEEEETTTSTTHHHHHHHHHHTTC--CEEEEECTTCSCHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             eEEEECCCchHHHHHHHHHHHCCC--cEEEEECCCCchhhHHHHhhcCC--CEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence            899999999999999999999886  8889998752 22 122233221  12111  1111345678999999999987


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      ...             ....+.+++.+++.+
T Consensus        89 ~~~-------------~~~~~~l~~aa~~~g  106 (318)
T 2r6j_A           89 FPQ-------------ILDQFKILEAIKVAG  106 (318)
T ss_dssp             GGG-------------STTHHHHHHHHHHHC
T ss_pred             hhh-------------hHHHHHHHHHHHhcC
Confidence            431             222355666666665

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.33  E-value=0.00095  Score=59.30  Aligned_cols=101  Identities=18%  Similarity=0.165  Sum_probs=60.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC--CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ---LENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~--~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------  108 (353)
                      .++|.|+||+|.+|.+++..|++.|  .  +|+++|++.....  ++.+.. ...+..+.. -+|   .+++++      
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~--~V~~~~r~~~~~~--~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR--HIIATARDVEKAT--ELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIV   77 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC--EEEEEESSGGGCH--HHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc--EEEEEecCHHHHH--HHHhcc-CCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence            3589999999999999999999988  6  9999998762111  122211 223333211 122   233333      


Q ss_pred             ---CCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHH
Q 018618          109 ---GMDLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIA  146 (353)
Q Consensus       109 ---~ADiVIi~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~  146 (353)
                         +.|+||..+|...  .+  ..+   ....+..|+.....+.+.+.
T Consensus        78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~  125 (250)
T 1yo6_A           78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLL  125 (250)
T ss_dssp             GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTH
T ss_pred             CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence               8999999998653  11  122   23345666655555444443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.33  E-value=0.00048  Score=62.45  Aligned_cols=145  Identities=12%  Similarity=0.083  Sum_probs=79.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.... ...+..+. .-+|   .++++       .
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            8 KVAVITGSSSGIGLAIAEGFAKEGA--HIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999997  899999875  222223332210 11222221 1122   22333       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      +.|++|..+|.....   ..+   ....+..|+.....+++.    +++.. .+.||++|.....            .+.
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------------~~~  151 (263)
T 3ai3_A           85 GADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAV------------QPL  151 (263)
T ss_dssp             SCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------------SCC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhc------------CCC
Confidence            799999999864321   122   233455666554444444    44333 4566666543211            112


Q ss_pred             CCCceEeechhhHHHHHHHHHHHh
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      +..-.++.+......+-+.++..+
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~  175 (263)
T 3ai3_A          152 WYEPIYNVTKAALMMFSKTLATEV  175 (263)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHh
Confidence            222334444333445566666665

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.32  E-value=0.0013  Score=60.58  Aligned_cols=156  Identities=17%  Similarity=0.158  Sum_probs=89.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~  108 (353)
                      +.+.|+||+|.+|.+++..|++.|.  +|+++|++.  ....+.++....  ..+..+. .-+|.   ++++       .
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           29 PVALITGAGSGIGRATALALAADGV--TVGALGRTRTEVEEVADEIVGAG--GQAIALEADVSDELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHTTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999998  999999876  333344454322  2233221 11222   2222       3


Q ss_pred             CCcEEEEcCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRK--P--GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~--~--g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..||....  +  ..+   ....+..|+.....+++.+    ++. ..+.||++|.-....          ..+
T Consensus       105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~Iv~isS~~~~~----------~~~  173 (283)
T 3v8b_A          105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQR-GGGAIVVVSSINGTR----------TFT  173 (283)
T ss_dssp             CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTT----------BCC
T ss_pred             CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCceEEEEcChhhcc----------CCC
Confidence            79999999986422  1  222   2344566765555544444    544 356667666533211          001


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .|..-.++.+......+-+.+|..++  +..|++..+
T Consensus       174 ~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  208 (283)
T 3v8b_A          174 TPGATAYTATKAAQVAIVQQLALELG--KHHIRVNAV  208 (283)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHHTT--TTTEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhC--ccCcEEEEE
Confidence            22233344444444556777888764  445554444

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.32  E-value=0.0017  Score=59.06  Aligned_cols=156  Identities=15%  Similarity=0.171  Sum_probs=88.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe----CCCchhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL----GQPQLENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++.... ...+..+.    ...+.++++       .
T Consensus        21 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           21 KRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999998  899999876  233333343211 12222221    112222223       3


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..||......   .+   ....+..|+..    .+.+.+.+.+....+.||++|.-...            .+.
T Consensus        98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~  165 (266)
T 4egf_A           98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL------------APL  165 (266)
T ss_dssp             SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT------------SCC
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhc------------cCC
Confidence            7899999998653221   22   23345566554    44445555555556777777653221            123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       166 ~~~~~Y~asK~a~~~l~~~la~e~~--~~gI~vn~v  199 (266)
T 4egf_A          166 PDHYAYCTSKAGLVMATKVLARELG--PHGIRANSV  199 (266)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHh--hhCeEEEEE
Confidence            3333444444444456677777763  334444333

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=97.32  E-value=0.00066  Score=61.91  Aligned_cols=146  Identities=13%  Similarity=0.048  Sum_probs=83.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CC--cHHHHHHHhcCCCCCeEEEEe-CCCc-------hhhhh---
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ-------LENAL---  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~--~~~~~~dl~~~~~~~~v~~~~-~t~d-------~~~al---  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+ ++  ......++.... ...+..+. .-+|       .++++   
T Consensus        12 k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           12 PAAVITGGARRIGHSIAVRLHQQGF--RVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4799999999999999999999997  8999998 54  222333332210 11222211 1122       22222   


Q ss_pred             ----CCCcEEEEcCCCCCCC---C--------------CCHHHHHHHHHHHHHHHHHHHHhhC--CC------cEEEEec
Q 018618          108 ----TGMDLVIIPAGVPRKP---G--------------MTRDDLFNINAGIVRTLCEGIAKCC--PN------ATVNLIS  158 (353)
Q Consensus       108 ----~~ADiVIi~ag~~~~~---g--------------~~r~~~~~~N~~i~~~i~~~i~~~~--p~------a~viv~t  158 (353)
                          ...|++|..+|.....   .              ......+..|+.....+++.+..+-  ..      +.||++|
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~is  168 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC  168 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEC
Confidence                3789999999864321   1              1123456677777767766666542  22      6677776


Q ss_pred             CCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHh
Q 018618          159 NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       159 NPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      .....            .+.+..-.++.+......+-+.+++.+
T Consensus       169 S~~~~------------~~~~~~~~Y~asK~a~~~l~~~la~e~  200 (276)
T 1mxh_A          169 DAMTD------------LPLPGFCVYTMAKHALGGLTRAAALEL  200 (276)
T ss_dssp             CGGGG------------SCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhc------------CCCCCCeehHHHHHHHHHHHHHHHHHH
Confidence            53221            123333334444444445666677766

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=97.32  E-value=0.0037  Score=55.73  Aligned_cols=149  Identities=15%  Similarity=0.149  Sum_probs=83.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC-CCCeEEEEeC-CCch---hh-------h
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD-TGAVVRGFLG-QPQL---EN-------A  106 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~-~~~~v~~~~~-t~d~---~~-------a  106 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++.... ....+..... .+|.   ++       .
T Consensus        14 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           14 GRVILVTGAARGIGAAAARAYAAHGA--SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            45899999999999999999999998  899999876  233333343322 1112221111 0121   12       2


Q ss_pred             hCCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          107 LTGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      +...|++|..+|.....+    .+   ....+..|+.....+.+.+..+   ...+.|+++|.....            .
T Consensus        92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~------------~  159 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR------------K  159 (247)
T ss_dssp             HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGT------------S
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhc------------C
Confidence            237899999998642211    12   2344566766665555555322   235667766643221            1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +.+..-.++.+......+-+.++..+.
T Consensus       160 ~~~~~~~Y~~sK~a~~~~~~~la~e~~  186 (247)
T 3i1j_A          160 GRANWGAYGVSKFATEGLMQTLADELE  186 (247)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence            233333444444444456677777763

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=97.32  E-value=0.0016  Score=59.84  Aligned_cols=155  Identities=13%  Similarity=0.079  Sum_probs=89.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+. .-+|.   ++++       .
T Consensus        25 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           25 QTAFVTGVSSGIGLAVARTLAARGI--AVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3799999999999999999999998  899999876  333344454332  2333321 11232   2222       3


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhh-----CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-----CPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~-----~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..||......   .+   ....+..|+.....+++.+...     ...+.||++|......            +
T Consensus       101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~------------~  168 (279)
T 3sju_A          101 PIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ------------G  168 (279)
T ss_dssp             SCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS------------C
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc------------C
Confidence            6799999998653211   22   3345667877766666655431     2346677766432211            2


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+|..++  +..|++..+
T Consensus       169 ~~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v  203 (279)
T 3sju_A          169 VMYAAPYTASKHGVVGFTKSVGFELA--KTGITVNAV  203 (279)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHH--hhCcEEEEE
Confidence            23223344444344456677777763  334444333

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.32  E-value=0.0007  Score=61.13  Aligned_cols=110  Identities=12%  Similarity=0.124  Sum_probs=66.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.     ..+..+. .-+|   .++++       
T Consensus         6 ~k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            6 GKVALVTGGASGVGLEVVKLLLGEGA--KVAFSDINEAAGQQLAAELG-----ERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHC-----TTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcC-----CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999997  899999875  222222331     1222221 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ...|++|..+|.....   ..+   ....+..|+.    ..+.+.+.+++..  +.||++|.
T Consensus        79 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS  138 (253)
T 1hxh_A           79 GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMAS  138 (253)
T ss_dssp             CSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcc
Confidence            3469999999865321   122   2344566655    4455555555443  67777664

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.32  E-value=0.0009  Score=60.89  Aligned_cols=153  Identities=12%  Similarity=0.037  Sum_probs=86.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhhh-------hCCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-------LTGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~a-------l~~AD  111 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++... ...+..... ..+..  .-+|   .+++       +...|
T Consensus        28 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~-~~~~~~~~~-~~~~~--Dv~~~~~v~~~~~~~~~~~g~iD  101 (260)
T 3gem_A           28 APILITGASQRVGLHCALRLLEHGH--RVIISYRTEHAS-VTELRQAGA-VALYG--DFSCETGIMAFIDLLKTQTSSLR  101 (260)
T ss_dssp             CCEEESSTTSHHHHHHHHHHHHTTC--CEEEEESSCCHH-HHHHHHHTC-EEEEC--CTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCChHHH-HHHHHhcCC-eEEEC--CCCCHHHHHHHHHHHHHhcCCCC
Confidence            4789999999999999999999997  899999987321 112221110 01110  1122   2222       24789


Q ss_pred             EEEEcCCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          112 LVIIPAGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       112 iVIi~ag~~~~~--g~~r---~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      ++|..||.....  ..+.   ...+..|+.....+.+.+..+   ...+.||++|.....            .+.+..-.
T Consensus       102 ~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~------------~~~~~~~~  169 (260)
T 3gem_A          102 AVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTR------------KGSSKHIA  169 (260)
T ss_dssp             EEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG------------TCCSSCHH
T ss_pred             EEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhc------------CCCCCcHh
Confidence            999999865322  2222   235566766555555544332   234667776643211            12333334


Q ss_pred             EeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          184 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ++.+......+-+.+|..++-   .|++..+.
T Consensus       170 Y~asKaa~~~l~~~la~e~~~---~Irvn~v~  198 (260)
T 3gem_A          170 YCATKAGLESLTLSFAARFAP---LVKVNGIA  198 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---TCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---CCEEEEEe
Confidence            555544445677778888753   26554443

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.32  E-value=0.00056  Score=62.13  Aligned_cols=110  Identities=16%  Similarity=0.254  Sum_probs=67.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCC---chhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQP---QLENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~---d~~~al~-------  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++..  .....++..     .+..+. .-+   +.+++++       
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            8 KVALVSGGARGMGASHVRAMVAEGA--KVVFGDILDEEGKAMAAELAD-----AARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTGG-----GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhhc-----CceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999998  8999998752  222222221     122211 112   2233444       


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +.|++|..+|.....   ..+   ....+..|+...    +.+.+.+++.. .+.||++|.
T Consensus        81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  140 (260)
T 1nff_A           81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISS  140 (260)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEee
Confidence            899999999865321   122   234556676655    45555555443 456666654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.31  E-value=0.00036  Score=64.07  Aligned_cols=143  Identities=10%  Similarity=0.026  Sum_probs=83.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +.+.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++..     .+..+. .-+|   .++++       .
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~d~~~v~~~~~~~~~~~g  101 (272)
T 4dyv_A           29 KIAIVTGAGSGVGRAVAVALAGAGY--GVALAGRRLDALQETAAEIGD-----DALCVPTDVTDPDSVRALFTATVEKFG  101 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTS-----CCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCC-----CeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3678889999999999999999998  899999876  2223333321     111111 1122   22223       3


Q ss_pred             CCcEEEEcCCCCCCC----CCC---HHHHHHHHHHH----HHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          109 GMDLVIIPAGVPRKP----GMT---RDDLFNINAGI----VRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~----g~~---r~~~~~~N~~i----~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      ..|++|..||.....    ..+   ....+..|+..    .+.+.+.+.+..+ .+.||+++.-....            
T Consensus       102 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------------  169 (272)
T 4dyv_A          102 RVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS------------  169 (272)
T ss_dssp             CCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS------------
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC------------
Confidence            899999999874321    122   23445667655    4555555555442 57777776543221            


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +.+..-.++.+......+-+.+|..++
T Consensus       170 ~~~~~~~Y~asKaa~~~l~~~la~e~~  196 (272)
T 4dyv_A          170 PRPYSAPYTATKHAITGLTKSTSLDGR  196 (272)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhC
Confidence            233333445544444456677777764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.31  E-value=0.0014  Score=59.20  Aligned_cols=152  Identities=15%  Similarity=0.137  Sum_probs=85.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHH-HHHHhcCCCCCeEEEEeCCCc---hhhh-------hCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTGAVVRGFLGQPQ---LENA-------LTGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~-~~dl~~~~~~~~v~~~~~t~d---~~~a-------l~~A  110 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++.... ..++..    ..+.  ..-+|   .+++       +...
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~----~~~~--~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            7 KGVLVTGGARGIGRAIAQAFAREGA--LVALCDLRPEGKEVAEAIGG----AFFQ--VDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTTHHHHHHHHTC----EEEE--CCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHhhC----CEEE--eeCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999997  8999998763221 222220    0011  01122   2222       2378


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          111 DLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      |++|..+|.....   ..+   ....+..|+.....+.+.+..+   ...+.||++|.-....            +.|..
T Consensus        79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~------------~~~~~  146 (256)
T 2d1y_A           79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLF------------AEQEN  146 (256)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTS------------BCTTB
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccC------------CCCCC
Confidence            9999999865321   122   2345667776666665554432   2346677766432111            12222


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      -.++.+......+-+.++..++  +..|++.++.
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v~  178 (256)
T 2d1y_A          147 AAYNASKGGLVNLTRSLALDLA--PLRIRVNAVA  178 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHHh--hcCeEEEEEe
Confidence            2344443334456666777663  3445544443

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.31  E-value=0.0019  Score=58.37  Aligned_cols=111  Identities=20%  Similarity=0.226  Sum_probs=67.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------  108 (353)
                      .+++.|+||+|.+|..++..|++.|.  +|+++|+++.  .....++     ...+..+. .-+|   .+++++      
T Consensus         5 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (254)
T 1hdc_A            5 GKTVIITGGARGLGAEAARQAVAAGA--RVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999998  8999998752  2122222     11222211 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecC
Q 018618          109 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  159 (353)
                       ..|++|..+|.....   ..+   ....+..|+...    +.+.+.+++.. .+.||++|.
T Consensus        78 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  138 (254)
T 1hdc_A           78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISS  138 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECc
Confidence             899999999865321   122   234456665544    45666665543 456666654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.31  E-value=0.00025  Score=69.43  Aligned_cols=138  Identities=20%  Similarity=0.260  Sum_probs=80.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhhh-hCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~a-l~~ADiVIi  115 (353)
                      ..++|.|+|. |.+|+.++..|...|.  +++++|.++..  +..+..... ..+.+  ..++   ++++ +.+||+||+
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~--~vvvId~d~~~--v~~~~~~g~-~vi~G--Dat~~~~L~~agi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGV--KMVVLDHDPDH--IETLRKFGM-KVFYG--DATRMDLLESAGAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCHHH--HHHHHHTTC-CCEES--CTTCHHHHHHTTTTTCSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEECCHHH--HHHHHhCCC-eEEEc--CCCCHHHHHhcCCCccCEEEE
Confidence            4568999999 9999999999999988  89999998621  122222221 11221  1123   2233 689999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRA  194 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~  194 (353)
                      +.+..           ..|    ..++..+++.+|+..||.-+ ++.+.      +.+.+. |  .+.|+--+...+.++
T Consensus        75 ~~~~~-----------~~n----~~i~~~ar~~~p~~~Iiara~~~~~~------~~L~~~-G--ad~Vi~~~~~~a~~l  130 (413)
T 3l9w_A           75 AIDDP-----------QTN----LQLTEMVKEHFPHLQIIARARDVDHY------IRLRQA-G--VEKPERETFEGALKT  130 (413)
T ss_dssp             CCSSH-----------HHH----HHHHHHHHHHCTTCEEEEEESSHHHH------HHHHHT-T--CSSCEETTHHHHHHH
T ss_pred             CCCCh-----------HHH----HHHHHHHHHhCCCCeEEEEECCHHHH------HHHHHC-C--CCEEECccHHHHHHH
Confidence            85311           233    34566677788987666655 44321      122332 3  344554444444445


Q ss_pred             HHHHHHHhCCCCCCC
Q 018618          195 NTFVAEVLGLDPRDV  209 (353)
Q Consensus       195 ~~~lA~~l~v~~~~v  209 (353)
                      -..+-..+|+++.++
T Consensus       131 a~~~L~~lg~~~~~~  145 (413)
T 3l9w_A          131 GRLALESLGLGPYEA  145 (413)
T ss_dssp             HHHHHHHTTCCHHHH
T ss_pred             HHHHHHHcCCCHHHH
Confidence            444445666665554

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.31  E-value=0.00031  Score=63.68  Aligned_cols=148  Identities=18%  Similarity=0.152  Sum_probs=86.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-----
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-----  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-----  108 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|...   ......++....  ..+..+. .-+|   ++++++     
T Consensus        21 ~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           21 GKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999997  899999833   222233343321  2222221 1122   233343     


Q ss_pred             --CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          109 --GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       109 --~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                        +.|+||..+|.....   ..+   ....+..|+.....+.+.+..+. ..+.||++|......           .+.+
T Consensus        97 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~-----------~~~~  165 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM-----------TGIP  165 (274)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC-----------CSCC
T ss_pred             cCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhcc-----------CCCC
Confidence              889999999865321   122   23456778887777777766553 225666665432110           1223


Q ss_pred             CCceEeechhhHHHHHHHHHHHhC
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      ..-.++.+......+-+.+++.++
T Consensus       166 ~~~~Y~~sK~a~~~~~~~~~~e~~  189 (274)
T 1ja9_A          166 NHALYAGSKAAVEGFCRAFAVDCG  189 (274)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhh
Confidence            333344444444456666777763

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.31  E-value=0.0056  Score=55.31  Aligned_cols=148  Identities=14%  Similarity=0.123  Sum_probs=84.0

Q ss_pred             CCeEEEEcCCC-CcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh------
Q 018618           41 GFKVAILGAAG-GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL------  107 (353)
Q Consensus        41 ~~KI~IiGa~G-~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al------  107 (353)
                      .+++.|+||+| .+|.+++..|++.|.  +|+++|++.  ......++.... ...+..+.. -+|   .++++      
T Consensus        22 ~k~vlITGasg~GIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (266)
T 3o38_A           22 GKVVLVTAAAGTGIGSTTARRALLEGA--DVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVEK   98 (266)
T ss_dssp             TCEEEESSCSSSSHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCchHHHHHHHHHHCCC--EEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            34789999977 499999999999998  899999876  233334443322 133333321 122   22222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          108 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                       ...|++|..+|......   .+   ....+..|+.....+.+.    +++....+.|++++.....            .
T Consensus        99 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~------------~  166 (266)
T 3o38_A           99 AGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGW------------R  166 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGT------------C
T ss_pred             hCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHc------------C
Confidence             36799999998643221   22   233455665544444444    4433355667766543221            1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +.+..-.++.+......+-+.+++.+.
T Consensus       167 ~~~~~~~Y~~sKaa~~~~~~~la~e~~  193 (266)
T 3o38_A          167 AQHSQSHYAAAKAGVMALTRCSAIEAV  193 (266)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence            233333455544444556677777763

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.30  E-value=0.0012  Score=60.72  Aligned_cols=152  Identities=14%  Similarity=0.123  Sum_probs=85.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.     ..+..+. .-+|.   +++       +.
T Consensus        30 k~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (277)
T 3gvc_A           30 KVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKIG-----CGAAACRVDVSDEQQIIAMVDACVAAFG  102 (277)
T ss_dssp             CEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHC-----SSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHcC-----CcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4788999999999999999999998  999999876  222233331     1111111 11222   222       23


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      ..|++|..+|.....   ..+   ....+..|+.....+++.+..+   ...+.||++|......            +.+
T Consensus       103 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~------------~~~  170 (277)
T 3gvc_A          103 GVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQV------------AVG  170 (277)
T ss_dssp             SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTS------------CCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcc------------CCC
Confidence            789999999864321   222   3345566776655555544332   3456777766432211            233


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ..-.++.+......+-+.+|..++  +..|++..+
T Consensus       171 ~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  203 (277)
T 3gvc_A          171 GTGAYGMSKAGIIQLSRITAAELR--SSGIRSNTL  203 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            333444444444456677777763  334444333

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=97.30  E-value=0.00083  Score=61.25  Aligned_cols=169  Identities=15%  Similarity=0.113  Sum_probs=87.3

Q ss_pred             ccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC
Q 018618           23 LQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG   99 (353)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~   99 (353)
                      .|+.+|++..-+    -+.++|.|+||+|.+|.+++..|++.|.  +|++.+++.   .+.....+....  ..+..+..
T Consensus        15 ~~~~~~~~~~m~----l~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~   86 (271)
T 4iin_A           15 TENLYFQSNAMQ----FTGKNVLITGASKGIGAEIAKTLASMGL--KVWINYRSNAEVADALKNELEEKG--YKAAVIKF   86 (271)
T ss_dssp             ---------CCC----CSCCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEEC
T ss_pred             cceehhhhhhcc----cCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CceEEEEC
Confidence            455555544321    1235799999999999999999999998  899999865   222233333322  22332211


Q ss_pred             -CCc---hhhhh-------CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHH----HHHHHHhhCCCcEEEEec
Q 018618          100 -QPQ---LENAL-------TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       100 -t~d---~~~al-------~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~t  158 (353)
                       -+|   .++++       .+.|++|..||......   .+   ....+..|+.....    +.+.+++. +.+.|+++|
T Consensus        87 D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~is  165 (271)
T 4iin_A           87 DAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKS-RFGSVVNVA  165 (271)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhc-CCCEEEEEe
Confidence             122   22223       37899999998753221   12   23445566554444    44444443 345666665


Q ss_pred             CCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          159 NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       159 NPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ....           . .+.+..-.++.+......+-+.+++.+.  +..|++..+
T Consensus       166 S~~~-----------~-~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v  207 (271)
T 4iin_A          166 SIIG-----------E-RGNMGQTNYSASKGGMIAMSKSFAYEGA--LRNIRFNSV  207 (271)
T ss_dssp             CHHH-----------H-HCCTTCHHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEE
T ss_pred             chhh-----------c-CCCCCchHhHHHHHHHHHHHHHHHHHHH--HhCcEEEEE
Confidence            4110           1 1244444455554444456667777763  334444333

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=97.30  E-value=0.00028  Score=70.45  Aligned_cols=104  Identities=11%  Similarity=0.049  Sum_probs=65.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH-----HHHHHhcC-------CCCCeEEEEeCC----Cch
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-----VTADISHM-------DTGAVVRGFLGQ----PQL  103 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~-----~~~dl~~~-------~~~~~v~~~~~t----~d~  103 (353)
                      ++++|.|+||+|++|++++..|...|.  +|+++++.....     ....+...       .....+..+.+.    .++
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  226 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSH--RIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  226 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEE--EEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCC--EEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccC
Confidence            457999999999999999999976666  899999876211     11111110       001234433211    122


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK  147 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~  147 (353)
                      . ++.++|+||.+++... ...+..++...|+...+++++.+.+
T Consensus       227 ~-~~~~~D~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~  268 (508)
T 4f6l_B          227 V-LPENMDTIIHAGARTD-HFGDDDEFEKVNVQGTVDVIRLAQQ  268 (508)
T ss_dssp             C-CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT
T ss_pred             C-CccCCCEEEECCceec-CCCCHHHHhhhHHHHHHHHHHHHHh
Confidence            2 5689999999988642 1223445567899999999999987

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=97.30  E-value=0.0027  Score=58.12  Aligned_cols=155  Identities=14%  Similarity=0.158  Sum_probs=87.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|..++..|++.|.  +|+++|++.  ......++...   ..+..+. .-+|   .++++       .
T Consensus        30 k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (276)
T 2b4q_A           30 RIALVTGGSRGIGQMIAQGLLEAGA--RVFICARDAEACADTATRLSAY---GDCQAIPADLSSEAGARRLAQALGELSA  104 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHTTS---SCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc---CceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999997  899999876  22233344321   1222221 1122   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCC---CcEEEEecCCCCchhHHHHHHHHHh
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCP---NATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p---~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      ..|++|..+|.....   ..+   ....+..|+...    +.+.+.+++...   .+.||++|.-...            
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~------------  172 (276)
T 2b4q_A          105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI------------  172 (276)
T ss_dssp             CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc------------
Confidence            789999999864321   112   334556676555    455555554432   1667776643211            


Q ss_pred             CCCCCCc-eEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          176 GTYDPKK-LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       176 ~~~~~~k-viG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .+.+..- .++.+......+-+.+++.+.  +..|++.++.
T Consensus       173 ~~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gI~vn~v~  211 (276)
T 2b4q_A          173 SAMGEQAYAYGPSKAALHQLSRMLAKELV--GEHINVNVIA  211 (276)
T ss_dssp             CCCCCSCTTHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CCCCCCccccHHHHHHHHHHHHHHHHHhc--ccCeEEEEEE
Confidence            1122222 344444444556667777763  3445544443

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.29  E-value=0.0019  Score=59.17  Aligned_cols=112  Identities=18%  Similarity=0.190  Sum_probs=66.8

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhCC-------
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALTG-------  109 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~~-------  109 (353)
                      ++.|+||+|.+|..++..|++.|.  +|+++|++.  ......++...   ..+..+. .-+|   .+++++.       
T Consensus        23 ~vlVTGas~gIG~aia~~La~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   97 (272)
T 2nwq_A           23 TLFITGATSGFGEACARRFAEAGW--SLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFAT   97 (272)
T ss_dssp             EEEESSTTTSSHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            789999999999999999999997  899999876  22233334321   1222221 1122   2333443       


Q ss_pred             CcEEEEcCCCCCC--C--CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          110 MDLVIIPAGVPRK--P--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       110 ADiVIi~ag~~~~--~--g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      .|++|..+|....  +  ..+   ....+..|+..    .+.+.+.+.+......||++|.
T Consensus        98 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS  158 (272)
T 2nwq_A           98 LRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS  158 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECC
T ss_pred             CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            4999999986532  1  122   23345666655    4455555555443326666654

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=97.28  E-value=0.00075  Score=67.28  Aligned_cols=102  Identities=7%  Similarity=0.096  Sum_probs=67.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC---CcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~---ADiVIi~a  117 (353)
                      ++||+|||+ |.+|+.++..|+..|+  +|.++|+++.+  +.++........+..   ++++++++++   +|+||++.
T Consensus        15 ~~~IgvIGl-G~MG~~lA~~La~~G~--~V~v~~r~~~~--~~~l~~~~~~~gi~~---~~s~~e~v~~l~~aDvVil~V   86 (480)
T 2zyd_A           15 KQQIGVVGM-AVMGRNLALNIESRGY--TVSIFNRSREK--TEEVIAENPGKKLVP---YYTVKEFVESLETPRRILLMV   86 (480)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHTTTC--CEEEECSSHHH--HHHHHHHSTTSCEEE---CSSHHHHHHTBCSSCEEEECS
T ss_pred             CCeEEEEcc-HHHHHHHHHHHHhCCC--eEEEEeCCHHH--HHHHHhhCCCCCeEE---eCCHHHHHhCCCCCCEEEEEC
Confidence            468999999 9999999999999988  89999987522  122221100112333   3567777776   99999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchh
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTV  165 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t  165 (353)
                      ..+    .           .++++++.+..+. |+.+||..+|.....+
T Consensus        87 p~~----~-----------~v~~vl~~l~~~l~~g~iIId~s~g~~~~t  120 (480)
T 2zyd_A           87 KAG----A-----------GTDAAIDSLKPYLDKGDIIIDGGNTFFQDT  120 (480)
T ss_dssp             CSS----S-----------HHHHHHHHHGGGCCTTCEEEECSCCCHHHH
T ss_pred             CCH----H-----------HHHHHHHHHHhhcCCCCEEEECCCCCHHHH
Confidence            321    1           1344555666555 5778888888764443

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=97.28  E-value=0.00022  Score=64.50  Aligned_cols=101  Identities=21%  Similarity=0.254  Sum_probs=68.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCC--CcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTG--MDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~--ADiVIi~ag  118 (353)
                      |||.|+||+|++|++++..|++ +.  +|+++|++...      .  . .  +.. .....++++++++  +|+||+++|
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~--~V~~~~r~~~~------~--~-~--~~~Dl~~~~~~~~~~~~~~~d~vi~~a~   66 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RH--EVIKVYNSSEI------Q--G-G--YKLDLTDFPRLEDFIIKKRPDVIINAAA   66 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TS--CEEEEESSSCC------T--T-C--EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CC--eEEEecCCCcC------C--C-C--ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence            6899999999999999999985 64  89999987521      0  0 0  111 0011234456665  999999998


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          119 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       119 ~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      .....  ..+..+.+..|+.....+++.+.+..  +.++++|
T Consensus        67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~iv~~S  106 (273)
T 2ggs_A           67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID--SYIVHIS  106 (273)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CEEEEEE
T ss_pred             ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC--CeEEEEe
Confidence            64311  12345667889999999999998764  3555554

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=97.28  E-value=0.0013  Score=59.50  Aligned_cols=155  Identities=19%  Similarity=0.163  Sum_probs=88.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++....  ..+..+. .-+|   .++.+       .
T Consensus        13 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           13 AVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQAG--GKAIGLECNVTDEQHREAVIKAALDQFG   88 (256)
T ss_dssp             CEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999998  899999876  233334444322  2233221 1122   22223       3


Q ss_pred             CCcEEEEcCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          109 GMDLVIIPAGVPRKP--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      ..|++|..||.....  ..+   ....+..|+.....+++.+..+   ...+.||++|.....            .+.+.
T Consensus        89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~  156 (256)
T 3gaf_A           89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE------------NTNVR  156 (256)
T ss_dssp             CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT------------CCCTT
T ss_pred             CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHc------------CCCCC
Confidence            789999999864321  223   2334566766555555554322   245677777653221            12333


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .-.++.+......+-+.+|+.++  +..|++..+
T Consensus       157 ~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v  188 (256)
T 3gaf_A          157 MASYGSSKAAVNHLTRNIAFDVG--PMGIRVNAI  188 (256)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHHh--hhCcEEEEE
Confidence            33445544444556677777764  334544433

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=97.28  E-value=0.0011  Score=62.23  Aligned_cols=147  Identities=15%  Similarity=0.147  Sum_probs=83.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC----------C--cHHHHHHHhcCCCCCeEEEEeC-CCch---h
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV----------N--TPGVTADISHMDTGAVVRGFLG-QPQL---E  104 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~----------~--~~~~~~dl~~~~~~~~v~~~~~-t~d~---~  104 (353)
                      .+.+.|+||+|.+|.+++..|++.|.  +|+++|++          .  ......++....  ..+..+.. -+|.   +
T Consensus        27 gk~vlVTGas~GIG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~  102 (322)
T 3qlj_A           27 GRVVIVTGAGGGIGRAHALAFAAEGA--RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG--GEAVADGSNVADWDQAA  102 (322)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT--CEEEEECCCTTSHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCcccccccccccHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHH
Confidence            34788999999999999999999998  99999986          2  233334444322  23333211 1232   2


Q ss_pred             hhh-------CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh----C-----CCcEEEEecCCCC
Q 018618          105 NAL-------TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC----C-----PNATVNLISNPVN  162 (353)
Q Consensus       105 ~al-------~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~----~-----p~a~viv~tNPv~  162 (353)
                      +.+       ...|++|..||.....   ..+   ....+..|+.....+++.+..+    .     +.+.||++|.-..
T Consensus       103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            222       2789999999865322   122   2345566776555444443322    1     1367777664211


Q ss_pred             chhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          163 STVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       163 ~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                                 . .+.+..-.++.+......+-+.+|..++
T Consensus       183 -----------~-~~~~~~~~Y~asKaal~~l~~~la~e~~  211 (322)
T 3qlj_A          183 -----------L-QGSVGQGNYSAAKAGIATLTLVGAAEMG  211 (322)
T ss_dssp             -----------H-HCBTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -----------c-cCCCCCccHHHHHHHHHHHHHHHHHHhc
Confidence                       0 0223333445544444456677777763

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.28  E-value=0.0035  Score=56.28  Aligned_cols=112  Identities=17%  Similarity=0.183  Sum_probs=67.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+. .-+|.   +++       +.
T Consensus         8 k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            8 KVALITGASSGIGEATARALAAEGA--AVAIAARRVEKLRALGDELTAAG--AKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999998  899999875  233333443221  2233221 11232   222       23


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  159 (353)
                      ..|++|..+|.....   ..+.   ...+..|+.....+++.    +.+..  +.||++|.
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS  142 (247)
T 2jah_A           84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSS  142 (247)
T ss_dssp             CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECC
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEcc
Confidence            799999999864321   1232   33456676555554444    43333  66777664

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.28  E-value=0.0017  Score=60.01  Aligned_cols=147  Identities=12%  Similarity=0.101  Sum_probs=88.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHH-HhcCCCCCeEEEEeC-CCch---hhhh------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTAD-ISHMDTGAVVRGFLG-QPQL---ENAL------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~d-l~~~~~~~~v~~~~~-t~d~---~~al------  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|++.|.+..  .....+ +...  ...+..+.. -+|.   ++++      
T Consensus        47 gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           47 GKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45899999999999999999999998  8999998762  112222 2222  223333211 1232   2222      


Q ss_pred             -CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          108 -TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                       ...|++|..+|.....+    .+   ....+..|+.....+++.+..+- ..+.||+++.-..           . .+.
T Consensus       123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~-----------~-~~~  190 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA-----------Y-EGN  190 (291)
T ss_dssp             HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHH-----------H-HCC
T ss_pred             cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHh-----------c-CCC
Confidence             37899999988643211    12   34556788888888888877653 3456666654211           0 123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhC
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +..-.++.+......+-+.+|..++
T Consensus       191 ~~~~~Y~asKaa~~~l~~~la~e~~  215 (291)
T 3ijr_A          191 ETLIDYSATKGAIVAFTRSLSQSLV  215 (291)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHHh
Confidence            3333445544444556677777763

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=97.27  E-value=0.002  Score=59.07  Aligned_cols=157  Identities=17%  Similarity=0.102  Sum_probs=91.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeC-CCch---hhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLG-QPQL---ENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~-t~d~---~~al-------  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++..... ...+..+.. -+|.   ++++       
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           12 RTYLVTGGGSGIGKGVAAGLVAAGA--SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999998  899999876  3334445554321 123443321 1232   2223       


Q ss_pred             CCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|++|..||.....    ..+   ....+..|+.....+++.+..+   ...+.||++|....            ..+
T Consensus        90 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~------------~~~  157 (281)
T 3svt_A           90 GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA------------SNT  157 (281)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHH------------HSC
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHH------------cCC
Confidence            3679999999863221    122   2345567776665555544432   34567777654210            123


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       158 ~~~~~~Y~asK~a~~~l~~~la~e~~--~~gi~vn~v  192 (281)
T 3svt_A          158 HRWFGAYGVTKSAVDHLMQLAADELG--ASWVRVNSI  192 (281)
T ss_dssp             CTTCTHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            34444555555555567777888775  334544444

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.27  E-value=0.0016  Score=59.36  Aligned_cols=157  Identities=15%  Similarity=0.128  Sum_probs=92.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al------  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|++.|.+.   ......++....  ..+..+. .-+|.   ++++      
T Consensus        18 ~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           18 GKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999998  889988765   223333444322  2233221 11232   2222      


Q ss_pred             -CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          108 -TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                       ...|++|..+|......   .+   ....+..|+.....+++.+..+- +.+.||+++......           .+.|
T Consensus        94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  162 (270)
T 3is3_A           94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD-----------FSVP  162 (270)
T ss_dssp             HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT-----------CCCT
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc-----------CCCC
Confidence             37899999998653211   22   33456778877777777776654 356677766533111           1233


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v  195 (270)
T 3is3_A          163 KHSLYSGSKGAVDSFVRIFSKDCG--DKKITVNAV  195 (270)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            334455554444556677777774  344544433

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.27  E-value=0.00013  Score=65.07  Aligned_cols=153  Identities=15%  Similarity=0.057  Sum_probs=84.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh---------CCCcE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL---------TGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al---------~~ADi  112 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|+++..... .. . ....++..   ..+.++++         .+.|+
T Consensus         4 k~vlITGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~-~~-~-~~~~D~~~---~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            4 GKVIVYGGKGALGSAILEFFKKNGY--TVLNIDLSANDQAD-SN-I-LVDGNKNW---TEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCCTTSS-EE-E-ECCTTSCH---HHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEecCcccccc-cc-E-EEeCCCCC---HHHHHHHHHHHHHHhCCCCCCE
Confidence            4799999999999999999999997  89999987621100 00 0 00001100   01112222         37899


Q ss_pred             EEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceE
Q 018618          113 VIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL  184 (353)
Q Consensus       113 VIi~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kvi  184 (353)
                      +|..+|.....    ..+   ....+..|+.....+.+.+..+- +.+.|+++|.....            .+.+..-.+
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~Y  143 (236)
T 1ooe_A           76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM------------GPTPSMIGY  143 (236)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------------SCCTTBHHH
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhc------------cCCCCcHHH
Confidence            99999864321    111   23456678877777777666543 24667776643211            122332334


Q ss_pred             eechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          185 GVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +.+......+-+.+++.++..+..|++.++
T Consensus       144 ~~sK~a~~~~~~~la~e~~~~~~gi~v~~v  173 (236)
T 1ooe_A          144 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTI  173 (236)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCCeEEEEE
Confidence            443333334555666655433555655444

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.26  E-value=0.00078  Score=59.72  Aligned_cols=111  Identities=17%  Similarity=0.138  Sum_probs=65.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCc---hhhhh-------CC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQ---LENAL-------TG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d---~~~al-------~~  109 (353)
                      ++|.|+||+|.+|++++..|++.|.  +|+++|++..  .....++..    ...... .-+|   +++++       .+
T Consensus         6 k~vlVtGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~-D~~~~~~~~~~~~~~~~~~~~   78 (234)
T 2ehd_A            6 GAVLITGASRGIGEATARLLHAKGY--RVGLMARDEKRLQALAAELEG----ALPLPG-DVREEGDWARAVAAMEEAFGE   78 (234)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTT----CEEEEC-CTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhh----ceEEEe-cCCCHHHHHHHHHHHHHHcCC
Confidence            4799999999999999999999997  8999998752  222222211    111110 1122   22222       37


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCC
Q 018618          110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNP  160 (353)
                      .|+||..+|.....   ..+   ....+..|+....    .+.+.+++. ..+.|+++|..
T Consensus        79 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~-~~~~iv~isS~  138 (234)
T 2ehd_A           79 LSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRR-GGGTIVNVGSL  138 (234)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCT
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCcEEEEECCc
Confidence            89999999864321   112   2345566766554    444444433 34667766643

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=97.25  E-value=0.0018  Score=64.55  Aligned_cols=99  Identities=17%  Similarity=0.180  Sum_probs=64.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC-CCCCeEEEEeCCCchhhhhC---CCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM-DTGAVVRGFLGQPQLENALT---GMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~-~~~~~v~~~~~t~d~~~al~---~ADiVIi  115 (353)
                      .+|||+|||. |.+|.+++..|+..|+  +|+++|+++...  .++... .....+..   +++++++++   ++|+||+
T Consensus         3 ~~~kIgiIGl-G~MG~~lA~~L~~~G~--~V~v~dr~~~~~--~~l~~~g~~g~~i~~---~~s~~e~v~~l~~aDvVil   74 (484)
T 4gwg_A            3 AQADIALIGL-AVMGQNLILNMNDHGF--VVCAFNRTVSKV--DDFLANEAKGTKVVG---AQSLKEMVSKLKKPRRIIL   74 (484)
T ss_dssp             CCBSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSTHHH--HHHHHTTTTTSSCEE---CSSHHHHHHTBCSSCEEEE
T ss_pred             CCCEEEEECh-hHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHhcccCCCceec---cCCHHHHHhhccCCCEEEE
Confidence            3579999999 9999999999999998  999999987222  222221 11123332   245666554   6999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  161 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  161 (353)
                      +...+               +.+.++++.+..+- |+.+||..||-.
T Consensus        75 ~Vp~~---------------~~v~~vl~~l~~~L~~g~iIId~st~~  106 (484)
T 4gwg_A           75 LVKAG---------------QAVDDFIEKLVPLLDTGDIIIDGGNSE  106 (484)
T ss_dssp             CSCSS---------------HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             ecCCh---------------HHHHHHHHHHHHhcCCCCEEEEcCCCC
Confidence            85321               12334455666554 677777777654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=97.25  E-value=0.0011  Score=60.70  Aligned_cols=154  Identities=8%  Similarity=0.093  Sum_probs=87.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++....  ..+..+. .-+|   .+++++       
T Consensus        27 k~~lVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           27 RTALVTGSSRGLGRAMAEGLAVAGA--RILINGTDPSRVAQTVQEFRNVG--HDAEAVAFDVTSESEIIEAFARLDEQGI  102 (271)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            4788999999999999999999998  899999876  333344454322  2232221 1122   223332       


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHH----HHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTL----CEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..||.....   ..+   ....+..|+.....+    .+.+.+. ..+.||+++.....            .+.
T Consensus       103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iV~isS~~~~------------~~~  169 (271)
T 4ibo_A          103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPR-GYGKIVNIGSLTSE------------LAR  169 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------SBC
T ss_pred             CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHhC------------CCC
Confidence            789999999865322   122   233456676555555    4444433 34666766542211            123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+|..++  +..|++..+
T Consensus       170 ~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  203 (271)
T 4ibo_A          170 ATVAPYTVAKGGIKMLTRAMAAEWA--QYGIQANAI  203 (271)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHh--hhCeEEEEE
Confidence            3333445544444556677777764  344544444

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=97.25  E-value=0.001  Score=59.13  Aligned_cols=155  Identities=20%  Similarity=0.227  Sum_probs=84.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  ++++. +++.  ......++...  ...+..+.. -+|   .+++++      
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~--~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGC--KVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAW   77 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999997  88884 6654  22222233321  123332211 122   233333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                       +.|+||..+|.....   ..+   ....+..|+.....+.+.+..+   ...+.+|++|....           .. +.
T Consensus        78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-----------~~-~~  145 (244)
T 1edo_A           78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG-----------LI-GN  145 (244)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH-----------HH-CC
T ss_pred             CCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhh-----------cC-CC
Confidence             789999999865421   112   2345667776655555554433   23466666664311           00 23


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+++.+.  +..+++.++
T Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  179 (244)
T 1edo_A          146 IGQANYAAAKAGVIGFSKTAAREGA--SRNINVNVV  179 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEE
T ss_pred             CCCccchhhHHHHHHHHHHHHHHhh--hcCCEEEEE
Confidence            3333344443333445566666653  334544444

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.24  E-value=0.0017  Score=58.57  Aligned_cols=143  Identities=7%  Similarity=-0.008  Sum_probs=80.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhh-------CCCcEEE
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL-------TGMDLVI  114 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al-------~~ADiVI  114 (353)
                      ++.|+||+|.+|.+++..|++.|.  +|+++|++.. .....++....  ..+..+ ...+.++++       ...|++|
T Consensus         3 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~--~~~~~~-d~~~v~~~~~~~~~~~g~iD~lv   77 (254)
T 1zmt_A            3 TAIVTNVKHFGGMGSALRLSEAGH--TVACHDESFKQKDELEAFAETY--PQLKPM-SEQEPAELIEAVTSAYGQVDVLV   77 (254)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHC--TTSEEC-CCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhcC--CcEEEE-CHHHHHHHHHHHHHHhCCCCEEE
Confidence            689999999999999999999998  8999998762 11222232211  111111 223443333       3789999


Q ss_pred             EcCCCC-CC-C--CCC---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          115 IPAGVP-RK-P--GMT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       115 i~ag~~-~~-~--g~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      ..+|.. .. +  ..+   ....+..|+.....+.+    .+++.. .+.||++|.-....            +.+..-.
T Consensus        78 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------~~~~~~~  144 (254)
T 1zmt_A           78 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFG------------PWKELST  144 (254)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTS------------CCTTCHH
T ss_pred             ECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCccccc------------CCCCchH
Confidence            999865 21 1  122   23345566655444444    444433 45666666533221            1222233


Q ss_pred             EeechhhHHHHHHHHHHHhC
Q 018618          184 LGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~  203 (353)
                      ++.+......+-+.+++.++
T Consensus       145 Y~~sK~a~~~~~~~la~e~~  164 (254)
T 1zmt_A          145 YTSARAGACTLANALSKELG  164 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHHhh
Confidence            44444344456667777763

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=97.24  E-value=0.0013  Score=59.30  Aligned_cols=101  Identities=15%  Similarity=0.146  Sum_probs=60.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCC---CCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeC----CCchhhhhC-----
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINP---LVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLG----QPQLENALT-----  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~---~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~-----  108 (353)
                      ++|.|+||+|.+|.+++..|++.|   .  +|+++|++.. .....++....  ..+..+..    ..+.+++++     
T Consensus        22 k~vlITGasggIG~~la~~L~~~G~~~~--~V~~~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           22 NSILITGCNRGLGLGLVKALLNLPQPPQ--HLFTTCRNREQAKELEDLAKNH--SNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS--EEEEEESCTTSCHHHHHHHHHC--TTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CEEEEECCCCcHHHHHHHHHHhcCCCCc--EEEEEecChhhhHHHHHhhccC--CceEEEEecCCChHHHHHHHHHHHHh
Confidence            489999999999999999999988   5  9999998762 11223332211  12222211    123334444     


Q ss_pred             ----CCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHH
Q 018618          109 ----GMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIA  146 (353)
Q Consensus       109 ----~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~  146 (353)
                          ..|+||..+|.....+    .+   ....+..|+.....+.+.+.
T Consensus        98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  146 (267)
T 1sny_A           98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACL  146 (267)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHH
Confidence                7999999998654111    12   23345666655555555443

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=97.24  E-value=0.0039  Score=57.13  Aligned_cols=155  Identities=15%  Similarity=0.115  Sum_probs=86.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC------------------cHHHHHHHhcCCCCCeEEEEe-CCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN------------------TPGVTADISHMDTGAVVRGFL-GQPQ  102 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~------------------~~~~~~dl~~~~~~~~v~~~~-~t~d  102 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.                  .......+...  ...+..+. .-+|
T Consensus        12 k~~lVTGas~gIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~   87 (286)
T 3uve_A           12 KVAFVTGAARGQGRSHAVRLAQEGA--DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAEVDVRD   87 (286)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTTC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEEcCCCC
Confidence            4799999999999999999999998  899999861                  11122223322  22333321 1123


Q ss_pred             ---hhhhh-------CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHH----HHHHHHhhCCCcEEEEecCCC
Q 018618          103 ---LENAL-------TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       103 ---~~~al-------~~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tNPv  161 (353)
                         .++++       ...|++|..+|......    .+   ....+..|+.....    +.+.+.+....+.||++|...
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence               22222       37899999998653322    22   23345666554444    444555545567777776532


Q ss_pred             CchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          162 NSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       162 ~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ...            +.|..-.++.+......+-+.+|..++  +..|++..+
T Consensus       168 ~~~------------~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gI~vn~v  206 (286)
T 3uve_A          168 GLK------------AYPHTGHYVAAKHGVVGLMRAFGVELG--QHMIRVNSV  206 (286)
T ss_dssp             GTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             hcc------------CCCCccHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            211            233333344443334456677777763  334544433

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=97.24  E-value=0.0027  Score=57.07  Aligned_cols=156  Identities=13%  Similarity=0.104  Sum_probs=87.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-----
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-----  107 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-----  107 (353)
                      +.++|.|+||+|.+|.+++..|++.|.  +|++.|. +.  ......++....  ..+..+. .-+|   .++++     
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGF--RVVAGCGPNSPRRVKWLEDQKALG--FDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTE--EEEEEECTTCSSHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CeeEEEecCCCCHHHHHHHHHHHHH
Confidence            345899999999999999999999987  8888884 33  233333443322  1222211 1122   22233     


Q ss_pred             --CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          108 --TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       108 --~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                        ...|++|..||.....   ..+   ....+..|+..    .+.+.+.+.+.. .+.|+++|......           
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----------  155 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK-----------  155 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGG-----------
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcc-----------
Confidence              3779999999865321   122   23455667666    444455555443 46677766543221           


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                       +.+..-.++.+......+-+.+++.+.  +..|++..+
T Consensus       156 -~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v  191 (256)
T 3ezl_A          156 -GQFGQTNYSTAKAGIHGFTMSLAQEVA--TKGVTVNTV  191 (256)
T ss_dssp             -SCSCCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             -CCCCCcccHHHHHHHHHHHHHHHHHHH--HhCCEEEEE
Confidence             233334455544444456677777763  334444433

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=97.24  E-value=0.0015  Score=59.89  Aligned_cols=116  Identities=17%  Similarity=0.171  Sum_probs=65.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------  107 (353)
                      .++|.|+||+|.+|..++..|+..|.  +|+++|++.  ......++.... ...+..+.. -+|   .++++       
T Consensus        28 ~k~vlITGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           28 GKKVIVTGASKGIGREMAYHLAKMGA--HVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM  104 (286)
T ss_dssp             TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999997  899999876  222222232211 123333211 122   22222       


Q ss_pred             CCCcEEEEc-CCCCCCC--CCCH---HHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618          108 TGMDLVIIP-AGVPRKP--GMTR---DDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~-ag~~~~~--g~~r---~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  159 (353)
                      .+.|++|+. +|....+  ..+.   ...+..|+.....+.+.+..+-  ..+.|+++|.
T Consensus       105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS  164 (286)
T 1xu9_A          105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSS  164 (286)
T ss_dssp             TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECC
Confidence            379999998 5654321  1222   3345666655555444443221  1345666553

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=97.24  E-value=0.00043  Score=63.89  Aligned_cols=147  Identities=14%  Similarity=0.052  Sum_probs=83.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------  108 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.... ...+..+.. -+|   .+++++      
T Consensus        26 ~k~vlITGasggiG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           26 GKVAFITGGGTGLGKGMTTLLSSLGA--QCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKVA  102 (302)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999997  899999876  222223332210 122332211 122   223333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHh----hCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAK----CCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~----~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                       ..|+||..||.....   ..+   ....+..|+.....+.+.+..    ....+.++++|....           . .+
T Consensus       103 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~-----------~-~~  170 (302)
T 1w6u_A          103 GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA-----------E-TG  170 (302)
T ss_dssp             CSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH-----------H-HC
T ss_pred             CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccc-----------c-cC
Confidence             459999999864321   122   334556677666555555443    334566766654210           0 12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHh
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      .++.-.++.+......+-+.+++.+
T Consensus       171 ~~~~~~Y~~sK~a~~~~~~~la~~~  195 (302)
T 1w6u_A          171 SGFVVPSASAKAGVEAMSKSLAAEW  195 (302)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHh
Confidence            3334445555444455666677765

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.23  E-value=0.0025  Score=58.45  Aligned_cols=114  Identities=19%  Similarity=0.140  Sum_probs=72.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------h
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHMDTGAVVRGFL-GQPQL---ENA-------L  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|.+..   .....++....  ..+..+. .-+|.   +++       +
T Consensus        30 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           30 KVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKIF  105 (283)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999998  8999998762   22223343321  2222221 11222   122       3


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                      ...|++|..+|.....   ..+   ....+..|+.....+++.+..+- ..+.||++|.
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  164 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  164 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence            4789999999865321   112   33456788888888887777652 4466776654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.23  E-value=0.0026  Score=57.75  Aligned_cols=115  Identities=22%  Similarity=0.223  Sum_probs=67.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++........+..+. .-+|   .+++++       
T Consensus        14 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           14 RVVLITGGGSGLGRATAVRLAAEGA--KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999997  899999876  222233333211012232221 1123   222332       


Q ss_pred             CCcEEEEcCCCCCC--C--CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRK--P--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~--~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ..|++|..+|....  +  ..+   ....+..|+.    ..+.+.+.+++.. .+.||++|.
T Consensus        92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  152 (267)
T 1iy8_A           92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTAS  152 (267)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECC
T ss_pred             CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcc
Confidence            68999999986532  1  122   2334556654    3445566665543 456666654

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.23  E-value=0.00077  Score=60.30  Aligned_cols=150  Identities=11%  Similarity=0.056  Sum_probs=83.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  .+....++..     .+..+. .-+|   .++++       .
T Consensus         4 k~vlVTGas~GIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~g   76 (235)
T 3l6e_A            4 GHIIVTGAGSGLGRALTIGLVERGH--QVSMMGRRYQRLQQQELLLGN-----AVIGIVADLAHHEDVDVAFAAAVEWGG   76 (235)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-----GEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhcC-----CceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999998  899999976  2223333321     122211 1122   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      ..|++|..||.....   ..+   ....+..|+.....+++.+...-  ..+.|++++......            +.+.
T Consensus        77 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~------------~~~~  144 (235)
T 3l6e_A           77 LPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV------------GKAN  144 (235)
T ss_dssp             SCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS------------SCSS
T ss_pred             CCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC------------CCCC
Confidence            679999999864321   122   33456677776655555554331  234666665432211            1122


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcce
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP  212 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~  212 (353)
                      .-.++.+......+-+.+++.++  +..|++.
T Consensus       145 ~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~  174 (235)
T 3l6e_A          145 ESLYCASKWGMRGFLESLRAELK--DSPLRLV  174 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTT--TSSEEEE
T ss_pred             CcHHHHHHHHHHHHHHHHHHHhh--ccCCEEE
Confidence            22233333334456677777764  4445433

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=97.23  E-value=0.00037  Score=63.23  Aligned_cols=92  Identities=16%  Similarity=0.215  Sum_probs=59.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      |||+|||+ |.+|+.++..|...| .  +|.++|+++..  ...+... ..  +...   +++.+++ ++|+||++.. +
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~~--~v~~~~r~~~~--~~~~~~~-~g--~~~~---~~~~~~~-~~D~vi~~v~-~   67 (263)
T 1yqg_A            1 MNVYFLGG-GNMAAAVAGGLVKQGGY--RIYIANRGAEK--RERLEKE-LG--VETS---ATLPELH-SDDVLILAVK-P   67 (263)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSC--EEEEECSSHHH--HHHHHHH-TC--CEEE---SSCCCCC-TTSEEEECSC-H
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCC--eEEEECCCHHH--HHHHHHh-cC--CEEe---CCHHHHh-cCCEEEEEeC-c
Confidence            69999998 999999999998888 5  89999987522  1122211 11  2222   2445677 9999999852 1


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  163 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  163 (353)
                                     ..+.++++.+..  ++.+|+.++|.+..
T Consensus        68 ---------------~~~~~v~~~l~~--~~~ivv~~~~g~~~   93 (263)
T 1yqg_A           68 ---------------QDMEAACKNIRT--NGALVLSVAAGLSV   93 (263)
T ss_dssp             ---------------HHHHHHHTTCCC--TTCEEEECCTTCCH
T ss_pred             ---------------hhHHHHHHHhcc--CCCEEEEecCCCCH
Confidence                           123445555544  36666666676653

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.23  E-value=0.00051  Score=60.88  Aligned_cols=93  Identities=18%  Similarity=0.200  Sum_probs=61.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      +|||+|||+ |.+|..++..|...|+  +|.++|+++.  ...++...    .+...    +++++++++|+||++....
T Consensus        28 ~~~I~iiG~-G~~G~~la~~l~~~g~--~V~~~~r~~~--~~~~~~~~----g~~~~----~~~~~~~~~DvVi~av~~~   94 (215)
T 2vns_A           28 APKVGILGS-GDFARSLATRLVGSGF--KVVVGSRNPK--RTARLFPS----AAQVT----FQEEAVSSPEVIFVAVFRE   94 (215)
T ss_dssp             -CCEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSHH--HHHHHSBT----TSEEE----EHHHHTTSCSEEEECSCGG
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEEeCCHH--HHHHHHHc----CCcee----cHHHHHhCCCEEEECCChH
Confidence            479999998 9999999999998887  8999998652  22233322    12221    4568899999999986411


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS  163 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~  163 (353)
                          .. .           ++.+ +....++.+++.++|+...
T Consensus        95 ----~~-~-----------~v~~-l~~~~~~~~vv~~s~g~~~  120 (215)
T 2vns_A           95 ----HY-S-----------SLCS-LSDQLAGKILVDVSNPTEQ  120 (215)
T ss_dssp             ----GS-G-----------GGGG-GHHHHTTCEEEECCCCCHH
T ss_pred             ----HH-H-----------HHHH-HHHhcCCCEEEEeCCCccc
Confidence                11 0           1111 2222367888888888753

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.22  E-value=0.0026  Score=53.01  Aligned_cols=72  Identities=14%  Similarity=0.166  Sum_probs=46.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhhh-hCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~a-l~~ADiVIi  115 (353)
                      +.++|+|+|+ |.+|..++..|...|.  +|+++|.++...  ..+.. .....+. ....++   +.++ +.++|+||+
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~--~V~vid~~~~~~--~~~~~-~~g~~~~-~~d~~~~~~l~~~~~~~ad~Vi~   90 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGH--SVVVVDKNEYAF--HRLNS-EFSGFTV-VGDAAEFETLKECGMEKADMVFA   90 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCGGGG--GGSCT-TCCSEEE-ESCTTSHHHHHTTTGGGCSEEEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHHH--HHHHh-cCCCcEE-EecCCCHHHHHHcCcccCCEEEE
Confidence            4569999998 9999999999998887  999999876221  11220 1111211 111122   2233 678999999


Q ss_pred             cCC
Q 018618          116 PAG  118 (353)
Q Consensus       116 ~ag  118 (353)
                      +.+
T Consensus        91 ~~~   93 (155)
T 2g1u_A           91 FTN   93 (155)
T ss_dssp             CSS
T ss_pred             EeC
Confidence            864

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.22  E-value=0.00051  Score=62.04  Aligned_cols=152  Identities=16%  Similarity=0.184  Sum_probs=85.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++.     ..+..+. .-+|   .+++++       
T Consensus        10 k~vlITGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~g   82 (261)
T 3n74_A           10 KVALITGAGSGFGEGMAKRFAKGGA--KVVIVDRDKAGAERVAGEIG-----DAALAVAADISKEADVDAAVEAALSKFG   82 (261)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999997  899999876  222222332     1122211 1122   223333       


Q ss_pred             CCcEEEEcCCCCCCCC----CCH---HHHHHHHHHH----HHHHHHHHHhhC---CCcEEEEecCCCCchhHHHHHHHHH
Q 018618          109 GMDLVIIPAGVPRKPG----MTR---DDLFNINAGI----VRTLCEGIAKCC---PNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g----~~r---~~~~~~N~~i----~~~i~~~i~~~~---p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                      ..|++|..+|....++    .+.   ...+..|+..    .+.+.+.+.+..   ..+.|++++......          
T Consensus        83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~----------  152 (261)
T 3n74_A           83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR----------  152 (261)
T ss_dssp             CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS----------
T ss_pred             CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC----------
Confidence            7899999998654222    122   2344556544    445555555442   245677666533211          


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                        +.|..-.++.+......+-+.+++.+.  +..|++..+
T Consensus       153 --~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v  188 (261)
T 3n74_A          153 --PRPNLAWYNATKGWVVSVTKALAIELA--PAKIRVVAL  188 (261)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHHHhh--hcCcEEEEE
Confidence              122223344444444456677777763  344544444

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.22  E-value=0.0004  Score=57.31  Aligned_cols=94  Identities=13%  Similarity=0.143  Sum_probs=63.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .+||+|+|+ |.+|..++..|...|.  +|.++|++..  +..+.++.     ..+..   .++++++++++|+||.+.+
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~--~v~v~~r~~~~~~~~a~~~~-----~~~~~---~~~~~~~~~~~Divi~at~   89 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQY--KVTVAGRNIDHVRAFAEKYE-----YEYVL---INDIDSLIKNNDVIITATS   89 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTC--EEEEEESCHHHHHHHHHHHT-----CEEEE---CSCHHHHHHTCSEEEECSC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEcCCHHHHHHHHHHhC-----CceEe---ecCHHHHhcCCCEEEEeCC
Confidence            459999998 9999999998887775  6999998762  22222222     22222   3567788999999999876


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCch
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST  164 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~  164 (353)
                      .+. +-..                  .....|..+++.+++|.++-
T Consensus        90 ~~~-~~~~------------------~~~l~~g~~vid~~~p~~~~  116 (144)
T 3oj0_A           90 SKT-PIVE------------------ERSLMPGKLFIDLGNPPNIE  116 (144)
T ss_dssp             CSS-CSBC------------------GGGCCTTCEEEECCSSCSBC
T ss_pred             CCC-cEee------------------HHHcCCCCEEEEccCCccCC
Confidence            442 1111                  01123578888899997643

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=97.21  E-value=0.00062  Score=62.11  Aligned_cols=148  Identities=11%  Similarity=0.127  Sum_probs=81.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------  108 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|++.  .......+....  ..+..+. .-+|   ++++++      
T Consensus        34 ~k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           34 GKVASVTGSSGGIGWAVAEAYAQAGA--DVAIWYNSHPADEKAEHLQKTYG--VHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             TCEEEETTTTSSHHHHHHHHHHHHTC--EEEEEESSSCCHHHHHHHHHHHC--SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            35899999999999999999999887  899999876  222222222111  1222221 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCC--C---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          109 -GMDLVIIPAGVPRK--P---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       109 -~ADiVIi~ag~~~~--~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                       ..|+||..+|....  +   ..+   ....+..|+..    .+.+.+.+++.. .+.||++|........         
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---------  179 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVN---------  179 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC----------
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCC---------
Confidence             48999999886432  1   111   22345567666    566677776554 3556666543321100         


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                       ..++.-.++.+......+-+.+++.++
T Consensus       180 -~~~~~~~Y~~sK~a~~~~~~~la~e~~  206 (279)
T 3ctm_A          180 -IPQLQAPYNTAKAACTHLAKSLAIEWA  206 (279)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -CCCCcccHHHHHHHHHHHHHHHHHHhc
Confidence             011112234443334456677777775

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=97.21  E-value=0.002  Score=58.20  Aligned_cols=115  Identities=17%  Similarity=0.249  Sum_probs=67.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------G  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------~  109 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++........+..+. .-+|   .+++++      +
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            8 KLAVVTAGSSGLGFASALELARNGA--RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999997  899999876  222233333210011222221 1122   233343      5


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecC
Q 018618          110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  159 (353)
                      .|++|..+|.....   ..+   ....+..|+...    +.+.+.+.+.. .+.||++|.
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  144 (260)
T 2z1n_A           86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGS  144 (260)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECc
Confidence            99999999864321   122   234456666555    45555554443 456666654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=97.21  E-value=0.0038  Score=56.34  Aligned_cols=151  Identities=12%  Similarity=0.088  Sum_probs=85.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT------G  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------~  109 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+.. -+|   .+++++      .
T Consensus         8 k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            8 ATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHAP   83 (252)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence            4789999999999999999999998  899999976  344444454332  23333211 122   223333      6


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      .|++|..+|.....   ..+   ....+..|+...    +.+.+.+++.. .+.||++|.....            .+.+
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------------~~~~  150 (252)
T 3h7a_A           84 LEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASL------------RGGS  150 (252)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGT------------CCCT
T ss_pred             ceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHc------------CCCC
Confidence            79999999865321   122   233455665544    44444455443 4566666542211            1223


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcc
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDV  211 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~  211 (353)
                      ..-.++.+......+-+.+|..++  +..|++
T Consensus       151 ~~~~Y~asKaa~~~l~~~la~e~~--~~gi~v  180 (252)
T 3h7a_A          151 GFAAFASAKFGLRAVAQSMARELM--PKNIHV  180 (252)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG--GGTEEE
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhh--hcCCEE
Confidence            233344443334456677777764  334554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=97.21  E-value=0.0003  Score=60.95  Aligned_cols=141  Identities=13%  Similarity=0.070  Sum_probs=81.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhC---CCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~---~ADiVIi~  116 (353)
                      ++|.|+||+|.+|++++..|++.    +|+++|++..  .....++.......++.   ...+++++++   +.|+||.+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~----~V~~~~r~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~id~vi~~   73 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH----DLLLSGRRAGALAELAREVGARALPADLA---DELEAKALLEEAGPLDLLVHA   73 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS----EEEEECSCHHHHHHHHHHHTCEECCCCTT---SHHHHHHHHHHHCSEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC----CEEEEECCHHHHHHHHHhccCcEEEeeCC---CHHHHHHHHHhcCCCCEEEEC
Confidence            47999999999999999999876    8999998752  22222222100001111   1123344555   89999999


Q ss_pred             CCCCCCC------CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhh
Q 018618          117 AGVPRKP------GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLD  190 (353)
Q Consensus       117 ag~~~~~------g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld  190 (353)
                      +|.....      ..+....+..|+.....+.+.+.+. +.+.++++|....           . .+.++.-.++.+...
T Consensus        74 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~iv~~sS~~~-----------~-~~~~~~~~Y~~sK~a  140 (207)
T 2yut_A           74 VGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQ-KGARAVFFGAYPR-----------Y-VQVPGFAAYAAAKGA  140 (207)
T ss_dssp             CCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEE-EEEEEEEECCCHH-----------H-HSSTTBHHHHHHHHH
T ss_pred             CCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhc-CCcEEEEEcChhh-----------c-cCCCCcchHHHHHHH
Confidence            9865321      1234456778998888888888432 3456666664321           0 123333344444433


Q ss_pred             HHHHHHHHHHHh
Q 018618          191 VVRANTFVAEVL  202 (353)
Q Consensus       191 ~~R~~~~lA~~l  202 (353)
                      ...+-..+++.+
T Consensus       141 ~~~~~~~~~~~~  152 (207)
T 2yut_A          141 LEAYLEAARKEL  152 (207)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            444555666665

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=97.21  E-value=0.0014  Score=59.97  Aligned_cols=155  Identities=15%  Similarity=0.125  Sum_probs=87.0

Q ss_pred             CeEEEEcCCCC--cHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~--vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      ++|.|+||+|+  +|..++..|+..|.  +|+++|++.......++.....  .+..+. .-+|   .++++       .
T Consensus        27 k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           27 KKILITGLLSNKSIAYGIAKAMHREGA--ELAFTYVGQFKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             CEEEECCCCSTTCHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCCCCCHHHHHHHHHHHcCC--EEEEeeCchHHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            48999999867  99999999999998  8999998863333334432211  111111 1122   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---C-----CC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          109 GMDLVIIPAGVPRKP---G-----MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g-----~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      .-|++|..+|.....   +     .+   ....+..|+.....+.+.+..+-  ..+.||+++.....            
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~------------  170 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAE------------  170 (280)
T ss_dssp             SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGT------------
T ss_pred             CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccc------------
Confidence            569999999865321   1     22   23345667666666666555431  24667766643221            


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+.+..-.++.+......+-+.+++.++  +..|++..+
T Consensus       171 ~~~~~~~~Y~asKaal~~~~~~la~e~~--~~gi~v~~v  207 (280)
T 3nrc_A          171 KAMPSYNTMGVAKASLEATVRYTALALG--EDGIKVNAV  207 (280)
T ss_dssp             SCCTTTHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHH--HcCcEEEEE
Confidence            1233333445544444456677777764  334544443

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.21  E-value=0.0054  Score=55.18  Aligned_cols=155  Identities=16%  Similarity=0.173  Sum_probs=86.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CC--Cc---hhhhh-----
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQ--PQ---LENAL-----  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t--~d---~~~al-----  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|+++  ....+.++..... ..+..+. .-  +|   .++.+     
T Consensus        12 ~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           12 DRIILVTGASDGIGREAAMTYARYGA--TVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHHH
Confidence            34789999999999999999999998  899999876  2333333332110 1111111 11  12   12222     


Q ss_pred             --CCCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHH
Q 018618          108 --TGMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       108 --~~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                        ...|++|..+|....  +  ..+.   ...+..|+.....+.+.+    ++. ..+.||++|......          
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~----------  157 (252)
T 3f1l_A           89 NYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKS-DAGSLVFTSSSVGRQ----------  157 (252)
T ss_dssp             HCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTS-SSCEEEEECCGGGTS----------
T ss_pred             hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHC-CCCEEEEECChhhcc----------
Confidence              378999999986321  1  2232   344566766555555544    433 346666665432211          


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                        +.+..-.++.+......+-+.+|+.++  +. |++..+
T Consensus       158 --~~~~~~~Y~asK~a~~~l~~~la~e~~--~~-irvn~v  192 (252)
T 3f1l_A          158 --GRANWGAYAASKFATEGMMQVLADEYQ--QR-LRVNCI  192 (252)
T ss_dssp             --CCTTCHHHHHHHHHHHHHHHHHHHHTT--TT-CEEEEE
T ss_pred             --CCCCCchhHHHHHHHHHHHHHHHHHhc--CC-cEEEEE
Confidence              233333344444444556778888875  33 655444

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=97.21  E-value=0.00056  Score=68.19  Aligned_cols=100  Identities=11%  Similarity=0.106  Sum_probs=62.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEEEeCCCchhhhhC---CCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALT---GMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~t~d~~~al~---~ADiVIi~  116 (353)
                      |||+|||+ |.+|+.++..|+..|+  +|.++|+++.+  ....+.........+..   +++++++++   ++|+||++
T Consensus         2 MkIgVIG~-G~mG~~lA~~La~~G~--~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~---~~~~~e~v~~l~~aDvVila   75 (478)
T 1pgj_A            2 MDVGVVGL-GVMGANLALNIAEKGF--KVAVFNRTYSKSEEFMKANASAPFAGNLKA---FETMEAFAASLKKPRKALIL   75 (478)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHTTTSTTGGGEEE---CSCHHHHHHHBCSSCEEEEC
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHhcCCCCCCCCeEE---ECCHHHHHhcccCCCEEEEe
Confidence            79999998 9999999999999988  89999987522  11111110000112333   356666665   59999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      ....    .           .+.++++.+..+. |+.+||..+|-..
T Consensus        76 Vp~~----~-----------~v~~vl~~l~~~l~~g~iIId~sng~~  107 (478)
T 1pgj_A           76 VQAG----A-----------ATDSTIEQLKKVFEKGDILVDTGNAHF  107 (478)
T ss_dssp             CCCS----H-----------HHHHHHHHHHHHCCTTCEEEECCCCCH
T ss_pred             cCCh----H-----------HHHHHHHHHHhhCCCCCEEEECCCCCh
Confidence            5321    0           1334445555544 5677777777654

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=97.20  E-value=0.0013  Score=59.12  Aligned_cols=105  Identities=16%  Similarity=0.216  Sum_probs=67.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--H-HHHHHhcCCCCCeEEEEeCCCchhhhh----CCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--G-VTADISHMDTGAVVRGFLGQPQLENAL----TGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~-~~~dl~~~~~~~~v~~~~~t~d~~~al----~~ADiVI  114 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|+++..  . ...|+.+.            .+.++++    ...|++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~Dl~~~------------~~v~~~~~~~~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH--QIVGIDIRDAEVIADLSTAEGRK------------QAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSSSSEECCTTSHHHHH------------HHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCchhhccccccCCCCH------------HHHHHHHHHhCCCCCEEE
Confidence            3699999999999999999999997  89999987611  0 11222221            1223334    3559999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCC
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPV  161 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv  161 (353)
                      ..||..... ......+..|+.....+.+.+..+   ...+.||++|...
T Consensus        68 ~~Ag~~~~~-~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           68 LCAGLGPQT-KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             ECCCCCTTC-SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             ECCCCCCCc-ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            999875411 235566777776666666655433   2236677776543

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.20  E-value=0.002  Score=58.88  Aligned_cols=144  Identities=13%  Similarity=0.103  Sum_probs=81.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ....+.++....  ..+..+. .-+|.   +++       +.
T Consensus         5 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            5 KVILITGASGGIGEGIARELGVAGA--KILLGARRQARIEAIATEIRDAG--GTALAQVLDVTDRHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999998  899999876  333344454332  2332221 11222   222       23


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..||......   .+   ....+..|+....    .+.+.+++. ..+.||++|.-...            .+.
T Consensus        81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~IV~isS~~~~------------~~~  147 (264)
T 3tfo_A           81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQ-RSGQIINIGSIGAL------------SVV  147 (264)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------CCC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEEcCHHHc------------ccC
Confidence            7899999998653211   22   2334566665554    444444433 35667766543211            122


Q ss_pred             CCCceEeechhhHHHHHHHHHHHh
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      +..-.++.+......+-+.+|..+
T Consensus       148 ~~~~~Y~asKaal~~l~~~la~e~  171 (264)
T 3tfo_A          148 PTAAVYCATKFAVRAISDGLRQES  171 (264)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhC
Confidence            333334444333344566677764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=97.19  E-value=0.0031  Score=55.98  Aligned_cols=115  Identities=19%  Similarity=0.225  Sum_probs=67.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCC--cHHHHHHHhcCCCCCeEEEEeCCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFLGQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~---~~a-------l~  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++ +++.  ......++.........-....-+|.   +++       +.
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~--~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGF--ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999987  88887 6654  22222333322111111011111222   222       34


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +.|+||..+|.....   ..+   ....+..|+..    .+.+.+.+++.. .+.++++|.
T Consensus        80 ~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS  139 (245)
T 2ph3_A           80 GLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITS  139 (245)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeC
Confidence            799999999865321   112   23455667666    555555555443 456666664

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=97.19  E-value=0.00018  Score=64.58  Aligned_cols=110  Identities=13%  Similarity=0.059  Sum_probs=65.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh---------CCCcE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL---------TGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al---------~~ADi  112 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|+++..... .. + ....++..   ..+.++++         .+.|+
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~-~~-~-~~~~D~~~---~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            8 RRVLVYGGRGALGSRCVQAFRARNW--WVASIDVVENEEAS-AS-V-IVKMTDSF---TEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSCCTTSS-EE-E-ECCCCSCH---HHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC--EEEEEeCChhhccC-Cc-E-EEEcCCCC---HHHHHHHHHHHHHHhCCCCCCE
Confidence            4799999999999999999999987  89999987621100 00 0 00001100   01122222         37899


Q ss_pred             EEEcCCCCCC----CCCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          113 VIIPAGVPRK----PGMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       113 VIi~ag~~~~----~g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                      +|..+|....    ...+   ....+..|+.....+.+.+..+- ..+.|+++|.
T Consensus        80 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS  134 (241)
T 1dhr_A           80 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGA  134 (241)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             EEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECC
Confidence            9999986432    1111   23445677777666666665442 2466777664

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.18  E-value=0.0048  Score=56.40  Aligned_cols=146  Identities=14%  Similarity=0.118  Sum_probs=82.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC-------------C--cHHHHHHHhcCCCCCeEEEEe-CCCch--
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-------------N--TPGVTADISHMDTGAVVRGFL-GQPQL--  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~-------------~--~~~~~~dl~~~~~~~~v~~~~-~t~d~--  103 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++             .  ......++....  ..+..+. .-+|.  
T Consensus        16 k~~lVTGas~gIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           16 RVAFITGAARGQGRSHAVRLAAEGA--DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG--RKALTRVLDVRDDAA   91 (280)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHH
Confidence            4789999999999999999999998  99999973             1  122233333322  2232221 11222  


Q ss_pred             -hhh-------hCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecCCCCchh
Q 018618          104 -ENA-------LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTV  165 (353)
Q Consensus       104 -~~a-------l~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNPv~~~t  165 (353)
                       ++.       +...|++|..+|.....   ..+   ....+..|+...    +...+.+.+....+.||++|.....  
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--  169 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL--  169 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT--
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc--
Confidence             222       23789999999865321   122   223455665544    4445555555556777777653221  


Q ss_pred             HHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          166 PIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       166 ~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                                .+.+..-.++.+......+-+.+|+.++
T Consensus       170 ----------~~~~~~~~Y~asKaa~~~~~~~la~e~~  197 (280)
T 3pgx_A          170 ----------KATPGNGHYSASKHGLTALTNTLAIELG  197 (280)
T ss_dssp             ----------SCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----------cCCCCchhHHHHHHHHHHHHHHHHHHhh
Confidence                      1223323344444334456677777763

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=97.17  E-value=0.0049  Score=56.43  Aligned_cols=114  Identities=17%  Similarity=0.194  Sum_probs=69.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+. .-+|   .+++++       
T Consensus        33 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           33 KRALITGASTGIGKKVALAYAEAGA--QVAVAARHSDALQVVADEIAGVG--GKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4899999999999999999999998  899999976  344444454322  1222111 1122   223333       


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ..|++|..||......   .+   ....+..|+...    +.+.+.+.+....+.|++++.
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS  169 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTAS  169 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECc
Confidence            7899999998653221   22   223445665544    444444554444466776654

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=97.17  E-value=0.0006  Score=62.94  Aligned_cols=64  Identities=19%  Similarity=0.290  Sum_probs=47.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||+ |.+|..++..|...|+  +|.++|+++...  ..+....    +..   .++++++++++|+||++.
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~--~V~~~~~~~~~~--~~~~~~g----~~~---~~~~~~~~~~~Dvvi~~v   64 (296)
T 2gf2_A            1 MPVGFIGL-GNMGNPMAKNLMKHGY--PLIIYDVFPDAC--KEFQDAG----EQV---VSSPADVAEKADRIITML   64 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHTTC--CEEEECSSTHHH--HHHHTTT----CEE---CSSHHHHHHHCSEEEECC
T ss_pred             CeEEEEec-cHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHHcC----Cee---cCCHHHHHhcCCEEEEeC
Confidence            68999998 9999999999998887  899999876221  2233221    222   246678889999999984

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.17  E-value=0.0014  Score=59.36  Aligned_cols=114  Identities=15%  Similarity=0.191  Sum_probs=67.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh---hh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE---NA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~---~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++....  ..+..+. .-+|.+   ++       +.
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            8 KVCLVTGAGGNIGLATALRLAEEGT--AIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4899999999999999999999997  899999875  233333444321  2233221 112321   12       23


Q ss_pred             CCcEEEEcCCCC-CC-C--CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          109 GMDLVIIPAGVP-RK-P--GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~-~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ..|++|..+|.. .. +  ..+   ....+..|+.....+++.+..+   ...+.||++|.
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS  144 (262)
T 1zem_A           84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTAS  144 (262)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcc
Confidence            789999999864 21 1  122   2334556765555554444332   13466776654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=97.16  E-value=0.00099  Score=59.36  Aligned_cols=156  Identities=19%  Similarity=0.234  Sum_probs=85.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~-------  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.... ...+..+. .-+|   ++++++       
T Consensus         8 ~~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            8 KVSLVTGSTRGIGRAIAEKLASAGS--TVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999987  899999875  222222332100 11222221 1122   333343       


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      +.|+||..+|.....   ..+   ..+.+..|+.....+.+    .+.+. ..+.+|++|....           .. +.
T Consensus        85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~-----------~~-~~  151 (248)
T 2pnf_A           85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ-RWGRIVNISSVVG-----------FT-GN  151 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHH-TCEEEEEECCHHH-----------HH-CC
T ss_pred             CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEEccHHh-----------cC-CC
Confidence            899999999865321   122   33456677776644444    44333 3456666653110           00 22


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +..-.++.+......+-+.+++.+.  +..+++.++.
T Consensus       152 ~~~~~Y~~sK~a~~~~~~~la~e~~--~~~i~v~~v~  186 (248)
T 2pnf_A          152 VGQVNYSTTKAGLIGFTKSLAKELA--PRNVLVNAVA  186 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEE
Confidence            3333344444444455666776663  3345544444

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.16  E-value=0.0022  Score=58.53  Aligned_cols=114  Identities=16%  Similarity=0.167  Sum_probs=73.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--------------cHHHHHHHhcCCCCCeEEEEe-CCCch---
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQL---  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--------------~~~~~~dl~~~~~~~~v~~~~-~t~d~---  103 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.              ......++...  ...+..+. .-+|.   
T Consensus        11 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A           11 KVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCHHHH
Confidence            4799999999999999999999998  899999862              11222233322  12333221 11222   


Q ss_pred             hhhh-------CCCcEEEEcCCCCCCC-CC---CHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          104 ENAL-------TGMDLVIIPAGVPRKP-GM---TRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       104 ~~al-------~~ADiVIi~ag~~~~~-g~---~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                      ++++       ...|++|..||..... ..   .....+..|+.....+.+.+..+- ..+.||++|.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  154 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence            2223       3789999999864322 12   234567888888888888887664 4567777665

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.16  E-value=0.00068  Score=54.94  Aligned_cols=99  Identities=10%  Similarity=0.064  Sum_probs=58.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhhh-hCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~a-l~~ADiVIi~a  117 (353)
                      ++|.|+|+ |.+|+.++..|...|.  +++++|.++.  ....+...  ..... ....++   ++++ +.++|+||++.
T Consensus         7 ~~v~I~G~-G~iG~~~a~~l~~~g~--~v~~~d~~~~--~~~~~~~~--~~~~~-~~d~~~~~~l~~~~~~~~d~vi~~~   78 (144)
T 2hmt_A            7 KQFAVIGL-GRFGGSIVKELHRMGH--EVLAVDINEE--KVNAYASY--ATHAV-IANATEENELLSLGIRNFEYVIVAI   78 (144)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC--CCEEEESCHH--HHHTTTTT--CSEEE-ECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCCHH--HHHHHHHh--CCEEE-EeCCCCHHHHHhcCCCCCCEEEECC
Confidence            47999998 9999999999998886  8899998642  11122221  12211 111122   2222 67899999987


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      +.+          ...|..    ++..+++.+|+.++...+||..
T Consensus        79 ~~~----------~~~~~~----~~~~~~~~~~~~ii~~~~~~~~  109 (144)
T 2hmt_A           79 GAN----------IQASTL----TTLLLKELDIPNIWVKAQNYYH  109 (144)
T ss_dssp             CSC----------HHHHHH----HHHHHHHTTCSEEEEECCSHHH
T ss_pred             CCc----------hHHHHH----HHHHHHHcCCCeEEEEeCCHHH
Confidence            532          122332    3444555667644444456543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.16  E-value=0.011  Score=52.92  Aligned_cols=153  Identities=18%  Similarity=0.172  Sum_probs=85.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LTG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~~  109 (353)
                      +++.|+||+|.+|.+++..|+..|.  +|+++|++. .... ..+....  ..+..+. .-+|.   +++       +..
T Consensus         8 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~-~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            8 KLAVITGGANGIGRAIAERFAVEGA--DIAIADLVPAPEAE-AAIRNLG--RRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCHHHH-HHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCchhHHH-HHHHhcC--CcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            4799999999999999999999997  899999876 3222 1333221  2232221 11232   222       347


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      .|++|..+|.....   ..+   ....+..|+...    +.+.+.+++.. .+.||++|.....            .+.|
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~------------~~~~  149 (249)
T 2ew8_A           83 CDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW------------LKIE  149 (249)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG------------SCCS
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhc------------cCCC
Confidence            89999999865321   122   234556676664    44444455443 4666666543211            1223


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ..-.++.+......+-+.+++.++  +..|++.++
T Consensus       150 ~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v  182 (249)
T 2ew8_A          150 AYTHYISTKAANIGFTRALASDLG--KDGITVNAI  182 (249)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHH--hcCcEEEEE
Confidence            333344444444456667777763  334443333

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.16  E-value=0.0044  Score=56.50  Aligned_cols=144  Identities=12%  Similarity=0.056  Sum_probs=81.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh--------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL--------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al--------  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++....  ..+..+. .-+|   .++++        
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           22 TTALVTGGSKGIGYAIVEELAGLGA--RVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHVFD   97 (273)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997  899999876  222233343221  2222221 1122   22222        


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|++|..+|.....   ..+   ....+..|+.....+.+.+    ++. ..+.||++|......            +
T Consensus        98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~~~------------~  164 (273)
T 1ae1_A           98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFS------------A  164 (273)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTS------------C
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCHhhcC------------C
Confidence            5789999999864321   122   2334456665555554444    433 346677766532211            2


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHh
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      .|..-.++.+......+-+.++..+
T Consensus       165 ~~~~~~Y~asK~a~~~~~~~la~e~  189 (273)
T 1ae1_A          165 LPSVSLYSASKGAINQMTKSLACEW  189 (273)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcchhHHHHHHHHHHHHHHHHHH
Confidence            2332334444333445566677766

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=97.16  E-value=0.0026  Score=56.87  Aligned_cols=157  Identities=18%  Similarity=0.162  Sum_probs=86.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC-C--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-N--TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~-~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~------  108 (353)
                      ++|.|+||+|.+|++++..|++.|.  +|+++|++ .  ......++...  ...+..+.. -+|   .+++++      
T Consensus         8 k~vlVTGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            8 KRVLITGSSQGIGLATARLFARAGA--KVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            5899999999999999999999987  89999987 4  23333334332  123333211 122   233344      


Q ss_pred             -CCcEEEEcCCC-CCC-C--CCC---HHHHHHHHHHHHHHHHH----HHHhh----CCCcEEEEecCCCCchhHHHHHHH
Q 018618          109 -GMDLVIIPAGV-PRK-P--GMT---RDDLFNINAGIVRTLCE----GIAKC----CPNATVNLISNPVNSTVPIAAEVF  172 (353)
Q Consensus       109 -~ADiVIi~ag~-~~~-~--g~~---r~~~~~~N~~i~~~i~~----~i~~~----~p~a~viv~tNPv~~~t~~~~~~~  172 (353)
                       +.|+||..+|. ... +  ..+   ....+..|+.....+.+    .+.+.    .+.+.+++++.-..          
T Consensus        84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~----------  153 (258)
T 3afn_B           84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG----------  153 (258)
T ss_dssp             SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHH----------
T ss_pred             CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhh----------
Confidence             89999999986 321 1  122   23345566655554444    33322    22366666654210          


Q ss_pred             HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                       ...+.++.-.++.+......+-+.+++.++  +..+++.++.
T Consensus       154 -~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~--~~gi~v~~v~  193 (258)
T 3afn_B          154 -HTGGGPGAGLYGAAKAFLHNVHKNWVDFHT--KDGVRFNIVS  193 (258)
T ss_dssp             -HHCCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             -ccCCCCCchHHHHHHHHHHHHHHHHHHhhc--ccCeEEEEEe
Confidence             111234444455554444556666777663  3344444443

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=97.15  E-value=0.0041  Score=57.58  Aligned_cols=155  Identities=16%  Similarity=0.147  Sum_probs=86.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--------------cHHHHHHHhcCCCCCeEEEEe-CCCch---
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQL---  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--------------~~~~~~dl~~~~~~~~v~~~~-~t~d~---  103 (353)
                      +.+.|+||+|.+|.+++..|++.|.  +|+++|+++              +.....++....  ..+..+. .-+|.   
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           29 KVAFITGAARGQGRSHAITLAREGA--DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFDAM  104 (299)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHH
Confidence            4789999999999999999999998  999999862              112222333321  2233221 11222   


Q ss_pred             hhhh-------CCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecCCCCchh
Q 018618          104 ENAL-------TGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTV  165 (353)
Q Consensus       104 ~~al-------~~ADiVIi~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~t  165 (353)
                      ++++       ...|++|..+|.....    ..+   ....+..|+.....+++    .+.+....+.||++|...... 
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~-  183 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR-  183 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS-
T ss_pred             HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc-
Confidence            2222       3789999999864321    123   23455667655544444    444444467777776532211 


Q ss_pred             HHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          166 PIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       166 ~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                                 +.+..-.++.+......+-+.+|..++  +..|++..+
T Consensus       184 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  219 (299)
T 3t7c_A          184 -----------GAENIGNYIASKHGLHGLMRTMALELG--PRNIRVNIV  219 (299)
T ss_dssp             -----------CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             -----------CCCCcchHHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence                       223333344443334456677777763  334444333

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.14  E-value=0.0016  Score=58.90  Aligned_cols=152  Identities=16%  Similarity=0.194  Sum_probs=90.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh----------hhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~----------~al~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|+++  ......++.     ..+..+. .-+|.+          +.+.
T Consensus         9 k~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (255)
T 4eso_A            9 KKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEFG-----PRVHALRSDIADLNEIAVLGAAAGQTLG   81 (255)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999998  999999876  222222221     1222211 112221          2234


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      ..|++|..+|......   .+   ....+..|+.....+.+.+..+- ..+.|+++|......            +.|..
T Consensus        82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~  149 (255)
T 4eso_A           82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG------------GHPGM  149 (255)
T ss_dssp             SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS------------BCTTB
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC------------CCCCc
Confidence            7899999998754221   12   33456788888777777776543 346777776533211            23333


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      -.++.+......+-+.+|..++  +..|++..+
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v  180 (255)
T 4eso_A          150 SVYSASKAALVSFASVLAAELL--PRGIRVNSV  180 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTG--GGTCEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHh--hhCcEEEEE
Confidence            3344444444456677777763  334544433

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.14  E-value=0.0012  Score=59.30  Aligned_cols=113  Identities=16%  Similarity=0.210  Sum_probs=68.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      +++.|+||+|.+|..++..|++.|.  +|++.|+ ++  ......++....  ..+..+. .-+|   .++++       
T Consensus         5 k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            5 KVALVTGASRGIGRAIAIDLAKQGA--NVVVNYAGNEQKANEVVDEIKKLG--SDAIAVRADVANAEDVTNMVKQTVDVF   80 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4799999999999999999999997  8999998 43  222233343221  2222221 1122   22333       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ...|++|..+|.....   ..+   ....+..|+..    .+.+.+.+++.. .+.||++|.
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  141 (246)
T 2uvd_A           81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIAS  141 (246)
T ss_dssp             SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECC
Confidence            3799999999865321   122   23455667666    455555555443 456666654

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=97.14  E-value=0.0046  Score=55.66  Aligned_cols=147  Identities=12%  Similarity=0.087  Sum_probs=80.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEe-CCCch---hhh-------h
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFL-GQPQL---ENA-------L  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~-~t~d~---~~a-------l  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++...... ..+..+. .-+|.   +++       +
T Consensus         8 k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (250)
T 3nyw_A            8 GLAIITGASQGIGAVIAAGLATDGY--RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY   85 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHTC--EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999988  899999876  23333333321101 1222211 11232   222       2


Q ss_pred             CCCcEEEEcCCCCCCC--CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          108 TGMDLVIIPAGVPRKP--GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~--g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ...|++|..||.....  ..+   ....+..|+.....+.+.    +++. ..+.|++++......            +.
T Consensus        86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------~~  152 (250)
T 3nyw_A           86 GAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQ-KNGYIFNVASRAAKY------------GF  152 (250)
T ss_dssp             CCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC-------------------
T ss_pred             CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEEccHHhcC------------CC
Confidence            3689999999864322  222   223455666554444444    4433 356677766533211            12


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhC
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      ++.-.++.+......+-+.+|..++
T Consensus       153 ~~~~~Y~asKaa~~~l~~~la~e~~  177 (250)
T 3nyw_A          153 ADGGIYGSTKFALLGLAESLYRELA  177 (250)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhh
Confidence            2233455544444556677777763

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.14  E-value=0.00094  Score=61.37  Aligned_cols=152  Identities=14%  Similarity=0.131  Sum_probs=84.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++.     ..+..+. .-+|   .++++       .
T Consensus        28 k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (277)
T 4dqx_A           28 RVCIVTGGGSGIGRATAELFAKNGA--YVVVADVNEDAAVRVANEIG-----SKAFGVRVDVSSAKDAESMVEKTTAKWG  100 (277)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999998  999999876  222222221     1122111 1122   22223       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      ..|++|..||.....   ..+   ....+..|+.....+.+.+..+   ...+.||++|.....            .+.+
T Consensus       101 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~  168 (277)
T 4dqx_A          101 RVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT------------SAIA  168 (277)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGT------------SCCT
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhC------------cCCC
Confidence            789999999864321   122   2344567776655555544332   234677776643211            1233


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ..-.++.+......+-+.+|..++  +..|++..+
T Consensus       169 ~~~~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v  201 (277)
T 4dqx_A          169 DRTAYVASKGAISSLTRAMAMDHA--KEGIRVNAV  201 (277)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CChhHHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            333344444344456677777764  334444443

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.13  E-value=0.0038  Score=55.27  Aligned_cols=102  Identities=18%  Similarity=0.175  Sum_probs=61.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++.... ...+..+. .-+|   .++++       .
T Consensus         3 k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            3 KVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999998  899999876  233333343111 12222211 1122   22333       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHH
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA  146 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~  146 (353)
                      ..|++|..+|.....   ..+   ....+..|+.....+.+.+.
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  123 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFL  123 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            789999999865322   122   23345666655555555443

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.13  E-value=0.0016  Score=58.98  Aligned_cols=155  Identities=17%  Similarity=0.158  Sum_probs=85.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  ++++. +.+.  ......++....  ..+..+. .-+|   .++++       
T Consensus         5 k~vlVTGas~gIG~aia~~l~~~G~--~vv~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (258)
T 3oid_A            5 KCALVTGSSRGVGKAAAIRLAENGY--NIVINYARSKKAALETAEEIEKLG--VKVLVVKANVGQPAKIKEMFQQIDETF   80 (258)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999998  88886 5554  233334444322  2333321 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..-|++|..||.....   ..+   ....+..|+.....+++.+..+   ...+.||++|.....            .+.
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~------------~~~  148 (258)
T 3oid_A           81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSI------------RYL  148 (258)
T ss_dssp             SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGT------------SBC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhC------------CCC
Confidence            3569999999864321   122   2334566766555555544322   235666666542211            123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+|..++  +..|++..+
T Consensus       149 ~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v  182 (258)
T 3oid_A          149 ENYTTVGVSKAALEALTRYLAVELS--PKQIIVNAV  182 (258)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHh--hcCcEEEEE
Confidence            3333445544444556777777763  344544444

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=97.13  E-value=0.00097  Score=66.48  Aligned_cols=98  Identities=17%  Similarity=0.156  Sum_probs=62.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc-CCCCCeEEEEeCCCchhhhh---CCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENAL---TGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~-~~~~~~v~~~~~t~d~~~al---~~ADiVIi~a  117 (353)
                      |||+|||+ |.+|+.++..|+..|+  +|.++|+++.+..  ++.. ......+..   ++++++++   +++|+||++.
T Consensus         3 m~IgvIG~-G~mG~~lA~~La~~G~--~V~v~dr~~~~~~--~l~~~~~~g~gi~~---~~~~~e~v~~l~~aDvVilaV   74 (482)
T 2pgd_A            3 ADIALIGL-AVMGQNLILNMNDHGF--VVCAFNRTVSKVD--DFLANEAKGTKVLG---AHSLEEMVSKLKKPRRIILLV   74 (482)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSTHHHH--HHHHTTTTTSSCEE---CSSHHHHHHHBCSSCEEEECS
T ss_pred             CeEEEECh-HHHHHHHHHHHHHCCC--eEEEEeCCHHHHH--HHHhccccCCCeEE---eCCHHHHHhhccCCCEEEEeC
Confidence            68999999 9999999999999988  8999998762221  2221 100112332   35666665   5999999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      ..+    .           .+.++++.+..+. |+.+||..+|-..
T Consensus        75 p~~----~-----------~v~~vl~~l~~~l~~g~iII~~s~~~~  105 (482)
T 2pgd_A           75 KAG----Q-----------AVDNFIEKLVPLLDIGDIIIDGGNSEY  105 (482)
T ss_dssp             CTT----H-----------HHHHHHHHHHHHCCTTCEEEECSCCCH
T ss_pred             CCh----H-----------HHHHHHHHHHhhcCCCCEEEECCCCCH
Confidence            321    0           1333444555444 5677777777654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=97.12  E-value=0.0077  Score=55.24  Aligned_cols=146  Identities=16%  Similarity=0.140  Sum_probs=83.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.   ......++.... ...+..+.. -+|   .++++       
T Consensus        26 k~~lVTGas~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           26 KTAVITGSTSGIGLAIARTLAKAGA--NIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTC--EEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            4789999999999999999999998  999999854   233333444321 123333211 122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|++|..||......   .+   ....+..|+.....+.+.    +.+. ..+.||++|.....            .+
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~------------~~  169 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKK-GWGRIINIASAHGL------------VA  169 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGT------------SC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECCcccc------------cC
Confidence            37899999998753221   22   234456676555555554    4443 34666666543211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhC
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      .+..-.++.+......+-+.+|..++
T Consensus       170 ~~~~~~Y~asKaa~~~l~~~la~e~~  195 (281)
T 3v2h_A          170 SPFKSAYVAAKHGIMGLTKTVALEVA  195 (281)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhh
Confidence            33333444444444556677777763

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=97.12  E-value=0.0037  Score=57.12  Aligned_cols=152  Identities=15%  Similarity=0.129  Sum_probs=85.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--------------cHHHHHHHhcCCCCCeEEEEe-CCCc---h
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ---L  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--------------~~~~~~dl~~~~~~~~v~~~~-~t~d---~  103 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++              .......+....  ..+..+. .-+|   .
T Consensus        11 k~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A           11 KTALITGGARGMGRSHAVALAEAGA--DIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCISAKVDVKDRAAL   86 (281)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--eEEEEeCCccccccccccccHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHH
Confidence            4799999999999999999999998  899999862              111122232221  2222221 1122   2


Q ss_pred             hhhh-------CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhH
Q 018618          104 ENAL-------TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVP  166 (353)
Q Consensus       104 ~~al-------~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~  166 (353)
                      ++++       ...|++|..||.....   ..+   ....+..|+.....+.+.    +.+. ..+.||++|.....   
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~~---  162 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKR-NYGRIVTVSSMLGH---  162 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGG---
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhhc---
Confidence            2223       3789999999865321   223   234456676655555555    4433 34667776643211   


Q ss_pred             HHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcce
Q 018618          167 IAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVP  212 (353)
Q Consensus       167 ~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~  212 (353)
                               .+.+..-.++.+......+-+.+|..++  +..|++.
T Consensus       163 ---------~~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~vn  197 (281)
T 3s55_A          163 ---------SANFAQASYVSSKWGVIGLTKCAAHDLV--GYGITVN  197 (281)
T ss_dssp             ---------SCCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEE
T ss_pred             ---------CCCCCCchhHHHHHHHHHHHHHHHHHHh--hcCcEEE
Confidence                     1223333344444444456677777763  3344433

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.12  E-value=0.001  Score=55.37  Aligned_cols=100  Identities=9%  Similarity=0.009  Sum_probs=59.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHH-HHHHHhcCCCCCeEEEEeC-CCc---hhhh-hCCCcEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPG-VTADISHMDTGAVVRGFLG-QPQ---LENA-LTGMDLV  113 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~-~~~dl~~~~~~~~v~~~~~-t~d---~~~a-l~~ADiV  113 (353)
                      ..+|.|+|+ |.+|+.++..|...|.  +++++|.++ ... ...+.....    +..+.+ .+|   ++++ +++||.|
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~--~V~vid~~~~~~~~~~~~~~~~~----~~~i~gd~~~~~~l~~a~i~~ad~v   75 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRLGDN----ADVIPGDSNDSSVLKKAGIDRCRAI   75 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHCTT----CEEEESCTTSHHHHHHHTTTTCSEE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCC--CEEEEECCChHHHHHHHHhhcCC----CeEEEcCCCCHHHHHHcChhhCCEE
Confidence            358999998 9999999999998887  899999874 211 111121111    111111 122   3344 8999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE-ecCCCC
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVN  162 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNPv~  162 (353)
                      |++.+..           ..|..    ++..+++..|+..++. +.||..
T Consensus        76 i~~~~~d-----------~~n~~----~~~~a~~~~~~~~ii~~~~~~~~  110 (153)
T 1id1_A           76 LALSDND-----------ADNAF----VVLSAKDMSSDVKTVLAVSDSKN  110 (153)
T ss_dssp             EECSSCH-----------HHHHH----HHHHHHHHTSSSCEEEECSSGGG
T ss_pred             EEecCCh-----------HHHHH----HHHHHHHHCCCCEEEEEECCHHH
Confidence            9985311           33432    3444555667665555 446653

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=97.12  E-value=0.0005  Score=63.83  Aligned_cols=109  Identities=13%  Similarity=0.124  Sum_probs=69.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh-CCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-~~ADiVIi~ag~~  120 (353)
                      |||+|||+ |.+|..++..|.+.|.  +|.++|+++..   .++............   .+..+++ .++|+||++....
T Consensus         3 mkI~iiGa-Ga~G~~~a~~L~~~g~--~V~~~~r~~~~---~~~~~~~g~~~~~~~---~~~~~~~~~~~D~vilavk~~   73 (294)
T 3g17_A            3 LSVAIIGP-GAVGTTIAYELQQSLP--HTTLIGRHAKT---ITYYTVPHAPAQDIV---VKGYEDVTNTFDVIIIAVKTH   73 (294)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHHCT--TCEEEESSCEE---EEEESSTTSCCEEEE---EEEGGGCCSCEEEEEECSCGG
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCC--eEEEEEeccCc---EEEEecCCeecccee---cCchHhcCCCCCEEEEeCCcc
Confidence            79999999 9999999999998886  88999987510   011111111111221   1223555 8999999985211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                                      .+.++++.++.+- |+..|+.+.|-++...        .   +|.+++++-
T Consensus        74 ----------------~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~--------~---~~~~~v~~g  113 (294)
T 3g17_A           74 ----------------QLDAVIPHLTYLAHEDTLIILAQNGYGQLE--------H---IPFKNVCQA  113 (294)
T ss_dssp             ----------------GHHHHGGGHHHHEEEEEEEEECCSSCCCGG--------G---CCCSCEEEC
T ss_pred             ----------------CHHHHHHHHHHhhCCCCEEEEeccCcccHh--------h---CCCCcEEEE
Confidence                            1334455555444 6778888889888663        1   677788753

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=97.11  E-value=0.0077  Score=57.23  Aligned_cols=158  Identities=16%  Similarity=0.151  Sum_probs=93.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---------HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGFL-GQPQ---LENAL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---------~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al  107 (353)
                      .+.+.|+||+|.+|..++..|++.|.  +|+++|++..         .....++....  ..+..+. .-+|   .++++
T Consensus        45 gk~vlVTGas~GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~  120 (346)
T 3kvo_A           45 GCTVFITGASRGIGKAIALKAAKDGA--NIVIAAKTAQPHPKLLGTIYTAAEEIEAVG--GKALPCIVDVRDEQQISAAV  120 (346)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEeCCChHHHHHHHHHHHHCCC--EEEEEECChhhhhhhHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHH
Confidence            35799999999999999999999997  8999998762         12333444322  2333221 1122   22222


Q ss_pred             -------CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHH
Q 018618          108 -------TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEV  171 (353)
Q Consensus       108 -------~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~  171 (353)
                             ...|++|..+|.....   ..+   ....+..|+.....+.+.+..+   ...+.||++|.+......     
T Consensus       121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~-----  195 (346)
T 3kvo_A          121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV-----  195 (346)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC-----
Confidence                   3899999999864321   122   2345677777666666665433   245678888776543310     


Q ss_pred             HHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          172 FKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       172 ~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                           .++..-.++.+...-..+-+.+|+.++   ..|++..+.
T Consensus       196 -----~~~~~~~Y~aSKaal~~l~~~la~e~~---~gIrvn~v~  231 (346)
T 3kvo_A          196 -----WFKQHCAYTIAKYGMSMYVLGMAEEFK---GEIAVNALW  231 (346)
T ss_dssp             -----GTSSSHHHHHHHHHHHHHHHHHHHHTT---TTCEEEEEE
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHHhc---CCcEEEEEe
Confidence                 022223344444444556778888886   345544443

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.11  E-value=0.0076  Score=54.62  Aligned_cols=116  Identities=12%  Similarity=0.078  Sum_probs=70.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++........+..+. .-+|.   ++.       +.
T Consensus         9 k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            9 AVAVVTGGSSGIGLATVELLLEAGA--AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999998  899999876  233334443311112232221 11232   122       24


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ..|++|..+|.....   ..+   ....+..|+.....+++.+..+   ...+.||++|.
T Consensus        87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS  146 (265)
T 3lf2_A           87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNS  146 (265)
T ss_dssp             SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEE
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECC
Confidence            779999999864321   222   2345667776666666655433   23566666654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=97.11  E-value=0.0042  Score=56.44  Aligned_cols=146  Identities=13%  Similarity=0.064  Sum_probs=84.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~A  110 (353)
                      ++|.|+||+|.+|..++..|++.|.  +|+++|++...       .    ..+..+. .-+|   .++++       ...
T Consensus         9 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~-------~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            9 KVVIVTGASMGIGRAIAERFVDEGS--KVIDLSIHDPG-------E----AKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESSCCC-------S----CSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEecCccc-------C----CceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4799999999999999999999998  89999987522       0    1111110 1112   22222       379


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          111 DLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      |++|..+|.....   ..+   ....+..|+.....+++.+..+   ...+.||++|.....            .+.+..
T Consensus        76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~  143 (264)
T 2dtx_A           76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQAS------------IITKNA  143 (264)
T ss_dssp             CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGT------------SCCTTB
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhc------------cCCCCc
Confidence            9999999864321   122   3345667777655555555433   234667766643211            122333


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      -.++.+......+-+.+++.++  +. |++.++.
T Consensus       144 ~~Y~~sK~a~~~~~~~la~e~~--~~-i~vn~v~  174 (264)
T 2dtx_A          144 SAYVTSKHAVIGLTKSIALDYA--PL-LRCNAVC  174 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT--TT-SEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHhc--CC-cEEEEEE
Confidence            3344444444556677777775  33 6655554

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=97.10  E-value=0.00085  Score=63.97  Aligned_cols=89  Identities=19%  Similarity=0.235  Sum_probs=58.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhhC----CCcEEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALT----GMDLVII  115 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al~----~ADiVIi  115 (353)
                      .+||+|||+ |.+|..++..|...|+  +|+++|+++. ...+.+   ..  .  ..   .++++++++    +||+||+
T Consensus         8 ~~kIgIIG~-G~mG~slA~~L~~~G~--~V~~~dr~~~~~~~a~~---~G--~--~~---~~~~~e~~~~a~~~aDlVil   74 (341)
T 3ktd_A            8 SRPVCILGL-GLIGGSLLRDLHAANH--SVFGYNRSRSGAKSAVD---EG--F--DV---SADLEATLQRAAAEDALIVL   74 (341)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHH---TT--C--CE---ESCHHHHHHHHHHTTCEEEE
T ss_pred             CCEEEEEee-cHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH---cC--C--ee---eCCHHHHHHhcccCCCEEEE
Confidence            469999998 9999999999999887  8999998762 112221   11  1  11   135555554    5799999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +..                ...+.++++.+..+.|+++|+.++
T Consensus        75 avP----------------~~~~~~vl~~l~~~~~~~iv~Dv~  101 (341)
T 3ktd_A           75 AVP----------------MTAIDSLLDAVHTHAPNNGFTDVV  101 (341)
T ss_dssp             CSC----------------HHHHHHHHHHHHHHCTTCCEEECC
T ss_pred             eCC----------------HHHHHHHHHHHHccCCCCEEEEcC
Confidence            842                112344445555556777666554

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=97.10  E-value=0.0012  Score=65.71  Aligned_cols=97  Identities=8%  Similarity=0.075  Sum_probs=62.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC---CcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTG---MDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~---ADiVIi~ag  118 (353)
                      +||+|||+ |.+|..++..|...|+  +|.++|+++...  .++........+..   ++++++++++   +|+||++..
T Consensus         6 ~~IgvIG~-G~mG~~lA~~L~~~G~--~V~v~dr~~~~~--~~l~~~~~~~gi~~---~~s~~e~v~~l~~aDvVilavp   77 (474)
T 2iz1_A            6 ANFGVVGM-AVMGKNLALNVESRGY--TVAIYNRTTSKT--EEVFKEHQDKNLVF---TKTLEEFVGSLEKPRRIMLMVQ   77 (474)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHH--HHHHHHTTTSCEEE---CSSHHHHHHTBCSSCEEEECCC
T ss_pred             CcEEEEee-HHHHHHHHHHHHhCCC--EEEEEcCCHHHH--HHHHHhCcCCCeEE---eCCHHHHHhhccCCCEEEEEcc
Confidence            58999999 9999999999999888  899999875221  12211100112333   3567777665   999999853


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPV  161 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv  161 (353)
                      .+               ..+.++++.+..+. |+.+||..+|-.
T Consensus        78 ~~---------------~~v~~vl~~l~~~l~~g~iiId~s~~~  106 (474)
T 2iz1_A           78 AG---------------AATDATIKSLLPLLDIGDILIDGGNTH  106 (474)
T ss_dssp             TT---------------HHHHHHHHHHGGGCCTTCEEEECSCCC
T ss_pred             Cc---------------hHHHHHHHHHHhhCCCCCEEEECCCCC
Confidence            21               11334445565555 567777777765

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=97.10  E-value=0.0013  Score=59.72  Aligned_cols=64  Identities=16%  Similarity=0.204  Sum_probs=45.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||+ |.+|..++..|...|+  +|+++|.........++....  ..       +++++++++||+||++.
T Consensus         1 M~I~iIG~-G~mG~~la~~l~~~g~--~V~~~~~~~~~~~~~~~~~~g--~~-------~~~~~~~~~aDvvi~~v   64 (264)
T 1i36_A            1 LRVGFIGF-GEVAQTLASRLRSRGV--EVVTSLEGRSPSTIERARTVG--VT-------ETSEEDVYSCPVVISAV   64 (264)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC--EEEECCTTCCHHHHHHHHHHT--CE-------ECCHHHHHTSSEEEECS
T ss_pred             CeEEEEec-hHHHHHHHHHHHHCCC--eEEEeCCccCHHHHHHHHHCC--Cc-------CCHHHHHhcCCEEEEEC
Confidence            69999998 9999999999998887  888888732222222333211  11       23467789999999985

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.10  E-value=0.0051  Score=56.08  Aligned_cols=155  Identities=19%  Similarity=0.172  Sum_probs=87.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC-------------C--cHHHHHHHhcCCCCCeEEEEe-CCCch--
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV-------------N--TPGVTADISHMDTGAVVRGFL-GQPQL--  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~-------------~--~~~~~~dl~~~~~~~~v~~~~-~t~d~--  103 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++             .  ......++....  ..+..+. .-+|.  
T Consensus        12 k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A           12 RVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN--RRIVAAVVDTRDFDR   87 (277)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHH
Confidence            4789999999999999999999998  99999983             1  122222333221  2233221 11232  


Q ss_pred             -hhh-------hCCCcEEEEcCCCCCCC---CCCH---HHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchh
Q 018618          104 -ENA-------LTGMDLVIIPAGVPRKP---GMTR---DDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTV  165 (353)
Q Consensus       104 -~~a-------l~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t  165 (353)
                       ++.       +...|++|..+|.....   ..+.   ...+..|+..    .+.+.+.+.+..+.+.||++|.-.... 
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-  166 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK-  166 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC-
Confidence             122       24689999999865322   1222   2345566544    455555566665567777776533211 


Q ss_pred             HHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          166 PIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       166 ~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                                 +.|..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       167 -----------~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v  202 (277)
T 3tsc_A          167 -----------MQPFMIHYTASKHAVTGLARAFAAELG--KHSIRVNSV  202 (277)
T ss_dssp             -----------CCSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             -----------CCCCchhhHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence                       223333344444444556677777774  344544433

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.10  E-value=0.0052  Score=56.69  Aligned_cols=181  Identities=17%  Similarity=0.144  Sum_probs=93.6

Q ss_pred             HhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCC--cHHHHHHHhcCCCC
Q 018618           15 SAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVN--TPGVTADISHMDTG   91 (353)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~--~~~~~~dl~~~~~~   91 (353)
                      |..|-|-..+|..-+....+    -..+++.|+||+|.+|..++..|++.|. ...|++.|++.  ....+.++......
T Consensus        11 ~~~~~~~~~~m~~~~~~~~~----l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~   86 (287)
T 3rku_A           11 SSFLVPRGSHMSQGRKAAER----LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN   86 (287)
T ss_dssp             ---------CCTTCHHHHHH----HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTT
T ss_pred             cceeeecCcccccCccchhh----cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCC
Confidence            34466766666654433221    1234799999999999999999988764 23899999876  33333344321111


Q ss_pred             CeEEEEeC----CCchhhhh-------CCCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHH----HhhC
Q 018618           92 AVVRGFLG----QPQLENAL-------TGMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGI----AKCC  149 (353)
Q Consensus        92 ~~v~~~~~----t~d~~~al-------~~ADiVIi~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~~i----~~~~  149 (353)
                      ..+..+..    ..+.++++       ...|++|..||.....    ..+   ....+..|+.....+++.+    ++. 
T Consensus        87 ~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-  165 (287)
T 3rku_A           87 AKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAK-  165 (287)
T ss_dssp             CEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-
T ss_pred             CeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence            23332211    12233333       3689999999864311    122   2345566765555555544    443 


Q ss_pred             CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          150 PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       150 p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ..+.||+++.....            .+.+..-.++.+......+-+.+|..++  +..|++..+
T Consensus       166 ~~g~IV~isS~~~~------------~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gIrvn~v  216 (287)
T 3rku_A          166 NSGDIVNLGSIAGR------------DAYPTGSIYCASKFAVGAFTDSLRKELI--NTKIRVILI  216 (287)
T ss_dssp             TCCEEEEECCGGGT------------SCCTTCHHHHHHHHHHHHHHHHHHHHTT--TSSCEEEEE
T ss_pred             CCCeEEEECChhhc------------CCCCCCchHHHHHHHHHHHHHHHHHHhh--hcCCEEEEE
Confidence            34566666543211            1233333445544444556777888764  445554444

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.10  E-value=0.0013  Score=58.98  Aligned_cols=112  Identities=21%  Similarity=0.210  Sum_probs=66.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhhhh-------CCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENAL-------TGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~al-------~~AD  111 (353)
                      +++.|+||+|.+|..++..|++.|.  +|+++|++.....  ++.... ...... ..-+|   .++++       ...|
T Consensus         6 k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~~~--~~~~~~-~~~~~~-~D~~~~~~~~~~~~~~~~~~g~id   79 (245)
T 1uls_A            6 KAVLITGAAHGIGRATLELFAKEGA--RLVACDIEEGPLR--EAAEAV-GAHPVV-MDVADPASVERGFAEALAHLGRLD   79 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHH--HHHHTT-TCEEEE-CCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHH--HHHHHc-CCEEEE-ecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999999999999998  8999998752111  111110 111111 11122   22233       3589


Q ss_pred             EEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecC
Q 018618          112 LVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISN  159 (353)
Q Consensus       112 iVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tN  159 (353)
                      ++|..+|.....   ..+   ....+..|+.....+++.+..+   ...+.|+++|.
T Consensus        80 ~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS  136 (245)
T 1uls_A           80 GVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS  136 (245)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcc
Confidence            999999865321   112   2345667777666666555443   23466777665

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.10  E-value=0.0023  Score=59.29  Aligned_cols=116  Identities=13%  Similarity=0.203  Sum_probs=68.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeC-CCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLG-QPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~-t~d---~~~al-------  107 (353)
                      +++.|+||+|.+|..++..|++.|.  +|+++|++.  ......++..... ...+..+.. -+|   .++++       
T Consensus        27 k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           27 KSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4799999999999999999999998  899999876  2223333432211 013333211 122   22233       


Q ss_pred             CCCcEEEEcCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKP-----GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~-----g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  159 (353)
                      ...|++|..+|.....     ..+   ....+..|+.....+++.+..+-  ..+.||++|.
T Consensus       105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS  166 (297)
T 1xhl_A          105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSS  166 (297)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred             CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence            3789999999864321     122   23345667655555554444321  1266777664

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=97.09  E-value=0.0024  Score=57.22  Aligned_cols=149  Identities=13%  Similarity=0.135  Sum_probs=83.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-e--CCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhh-------CC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-D--VVN--TPGVTADISHMDTGAVVRGFLGQPQLENAL-------TG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D--~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-------~~  109 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++ |  ++.  ......++ .   ...+.   ...+.++++       ..
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~r~~~~~~~~~~~~-~---~~~~~---~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGY--TVVCHDASFADAAERQRFESEN-P---GTIAL---AEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHS-T---TEEEC---CCCCGGGHHHHHGGGSSC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEecCCcCCHHHHHHHHHHh-C---CCccc---CHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999998  89999 5  765  22222222 1   11111   122333333       37


Q ss_pred             CcEEEEcCCCCCC----C--CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          110 MDLVIIPAGVPRK----P--GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       110 ADiVIi~ag~~~~----~--g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      .|++|..+|....    +  ..+   ....+..|+.....+++.+    ++. ..+.||++|.-...            .
T Consensus        73 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~------------~  139 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAA-GGASVIFITSSVGK------------K  139 (244)
T ss_dssp             EEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCGGGT------------S
T ss_pred             CCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEECChhhC------------C
Confidence            8999999986533    1  122   2345566765555544444    333 35667776643221            1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +.|..-.++.+......+-+.++..++  +..|++..+
T Consensus       140 ~~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v  175 (244)
T 1zmo_A          140 PLAYNPLYGPARAATVALVESAAKTLS--RDGILLYAI  175 (244)
T ss_dssp             CCTTCTTHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHHh--hcCcEEEEE
Confidence            233333455544444456667777663  334444333

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=97.08  E-value=0.0043  Score=58.05  Aligned_cols=146  Identities=14%  Similarity=0.136  Sum_probs=82.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--------------cHHHHHHHhcCCCCCeEEEEe-CCCc---h
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ---L  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--------------~~~~~~dl~~~~~~~~v~~~~-~t~d---~  103 (353)
                      +++.|+||+|.+|..++..|++.|.  +|+++|.+.              +......+...  ...+..+. .-+|   .
T Consensus        47 k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           47 KVAFITGAARGQGRTHAVRLAQDGA--DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRDLASL  122 (317)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--eEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHH
Confidence            4788999999999999999999998  999999762              11112222222  12233221 1122   2


Q ss_pred             hhhh-------CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHHhhCCCcEEEEecCCCCchhH
Q 018618          104 ENAL-------TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVNSTVP  166 (353)
Q Consensus       104 ~~al-------~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tNPv~~~t~  166 (353)
                      ++.+       ...|++|..||.....   ..+   ....+..|+.....    +.+.+.+....+.||++|......  
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~--  200 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR--  200 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC--
Confidence            2222       3789999999865321   222   23445666655444    444455444567777776533211  


Q ss_pred             HHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          167 IAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       167 ~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                                +.+..-.++.+......+-+.+|..++
T Consensus       201 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~  227 (317)
T 3oec_A          201 ----------GAPGQSHYAASKHGVQGLMLSLANEVG  227 (317)
T ss_dssp             ----------CCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             ----------CCCCCcchHHHHHHHHHHHHHHHHHHh
Confidence                      223223344444344456677777763

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.08  E-value=0.0016  Score=59.01  Aligned_cols=156  Identities=14%  Similarity=0.125  Sum_probs=91.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      +++.|+||+|.+|.+++..|+..|.  +|++. +.+.  ......++....  ..+..+. .-+|   .++++       
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            9 RTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999998  88888 4444  222333444322  2222211 1122   22233       


Q ss_pred             CCCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          108 TGMDLVIIPAGVPR--KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       108 ~~ADiVIi~ag~~~--~~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      ...|++|..+|...  .+  ..+   ....+..|+.....+.+.+..+- +.+.||++|....           ...+.+
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~-----------~~~~~~  153 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG-----------RDGGGP  153 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH-----------HHCCST
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh-----------ccCCCC
Confidence            37899999987541  11  222   23456778888888888776553 2456666654211           112334


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ..-.++.+......+-+.+|..++-  . |++..+.
T Consensus       154 ~~~~Y~asKaa~~~l~~~la~e~~~--~-I~vn~v~  186 (259)
T 3edm_A          154 GALAYATSKGAVMTFTRGLAKEVGP--K-IRVNAVC  186 (259)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHTT--T-CEEEEEE
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHCC--C-CEEEEEE
Confidence            4444555544455677788888753  3 6554443

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.08  E-value=0.0028  Score=58.64  Aligned_cols=146  Identities=11%  Similarity=0.079  Sum_probs=85.9

Q ss_pred             CeEEEEcCCCC--cHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~--vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      +++.|+||+|.  +|.+++..|++.|.  +|++.|+++ ......++....  ..+..+. .-+|   .++++       
T Consensus        32 k~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           32 KRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEEL--GAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             CEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            47999999888  99999999999997  899999875 222222222111  1122211 1122   22222       


Q ss_pred             CCCcEEEEcCCCCC-----CC--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          108 TGMDLVIIPAGVPR-----KP--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       108 ~~ADiVIi~ag~~~-----~~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      ...|++|..||...     .+  ..+   ....+..|+.....+++.+..+- ..+.||++|......            
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~------------  175 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK------------  175 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS------------
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc------------
Confidence            37899999998753     11  122   33456778777777777766553 357777776432211            


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +.+..-.++.+......+-+.+|+.++
T Consensus       176 ~~~~~~~Y~asKaa~~~l~~~la~e~~  202 (293)
T 3grk_A          176 VMPNYNVMGVAKAALEASVKYLAVDLG  202 (293)
T ss_dssp             BCTTTTHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence            233333455554444556777777764

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=97.08  E-value=0.0037  Score=56.41  Aligned_cols=155  Identities=14%  Similarity=0.137  Sum_probs=85.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH----HHHHHHhcCCCCCeEEEEe-CCCc---hhhhh------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP----GVTADISHMDTGAVVRGFL-GQPQ---LENAL------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~----~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++...    ....++....  ..+..+. .-+|   .++++      
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (258)
T 3a28_C            3 KVAMVTGGAQGIGRGISEKLAADGF--DIAVADLPQQEEQAAETIKLIEAAD--QKAVFVGLDVTDKANFDSAIDEAAEK   78 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEECGGGHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999887  89999987522    1223343221  2233221 1123   22233      


Q ss_pred             -CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHH----HHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          108 -TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLC----EGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~----~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                       ...|++|..+|.....   ..+   ....+..|+.....+.    +.+++....+.||++|.....            .
T Consensus        79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~  146 (258)
T 3a28_C           79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAI------------Q  146 (258)
T ss_dssp             HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGT------------S
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhc------------c
Confidence             3789999999865321   122   2344566665544444    444444433666666543211            1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +.|..-.++.+......+-+.+++.++  +..|++.++
T Consensus       147 ~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~vn~v  182 (258)
T 3a28_C          147 GFPILSAYSTTKFAVRGLTQAAAQELA--PKGHTVNAY  182 (258)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHHH--hhCeEEEEE
Confidence            223333344443334455666777663  334544444

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=97.08  E-value=0.00033  Score=64.58  Aligned_cols=90  Identities=18%  Similarity=0.143  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc----HHHH---HHHhcCCCCCeEEEEeC----CCchhhhhCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVT---ADISHMDTGAVVRGFLG----QPQLENALTG  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~----~~~~---~dl~~~~~~~~v~~~~~----t~d~~~al~~  109 (353)
                      ++||.|+||+|++|++++..|+..|.  +|++++++..    ....   ..+...    .+..+..    ..++.+++++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~l~R~~~~~~~~~~~~~~~~l~~~----~v~~v~~D~~d~~~l~~~~~~   77 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH--PTFLLVRESTASSNSEKAQLLESFKAS----GANIVHGSIDDHASLVEAVKN   77 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCCCCTTTTHHHHHHHHHHHTT----TCEEECCCTTCHHHHHHHHHT
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC--CEEEEECCcccccCHHHHHHHHHHHhC----CCEEEEeccCCHHHHHHHHcC
Confidence            46899999999999999999999886  8888988741    1121   122221    1222111    1245678899


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      +|+||.+++...             ....+.+++.+++.+
T Consensus        78 ~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g  104 (308)
T 1qyc_A           78 VDVVISTVGSLQ-------------IESQVNIIKAIKEVG  104 (308)
T ss_dssp             CSEEEECCCGGG-------------SGGGHHHHHHHHHHC
T ss_pred             CCEEEECCcchh-------------hhhHHHHHHHHHhcC
Confidence            999999987432             122345666666665

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=97.07  E-value=0.0024  Score=58.61  Aligned_cols=155  Identities=12%  Similarity=0.099  Sum_probs=88.5

Q ss_pred             CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcC-CCCCeEEEEeCCCc---hhhhh-------
Q 018618           42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHM-DTGAVVRGFLGQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~-~~~~~v~~~~~t~d---~~~al-------  107 (353)
                      +++.|+||+  |.+|.+++..|+..|.  +|+++|++. ......++... .....+..  .-+|   .++++       
T Consensus        22 k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~--Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           22 KRALITGVANERSIAYGIAKSFHREGA--QLAFTYATPKLEKRVREIAKGFGSDLVVKC--DVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCCEEEC--CTTCHHHHHHHHHHHHHHT
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHhcCCeEEEEc--CCCCHHHHHHHHHHHHHHc
Confidence            479999998  8999999999999987  899999876 22233333221 10011111  1122   22223       


Q ss_pred             CCCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          108 TGMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      ...|++|+.||....     +  ..+   ....+..|+.....+++.+..+-  ..+.||++|.....            
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~------------  165 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAE------------  165 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGT------------
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhc------------
Confidence            378999999986532     1  122   23456778887777777776543  24677776642211            


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+.+..-.++.+......+-+.+|..++  +..|++..+
T Consensus       166 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  202 (285)
T 2p91_A          166 KVVPHYNVMGIAKAALESTVRYLAYDIA--KHGHRINAI  202 (285)
T ss_dssp             SBCTTTTHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEE
T ss_pred             cCCCCccHHHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence            1223333445544444456666777663  344544443

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.07  E-value=0.00095  Score=54.80  Aligned_cols=96  Identities=9%  Similarity=0.079  Sum_probs=59.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCch---hh-hhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---EN-ALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~---~~-al~~ADiVIi~  116 (353)
                      ..+|.|+|+ |.+|..++..|...|+  +++++|.++..  ...+....  ..+- ....++.   ++ .+.+||+||++
T Consensus         7 ~~~viIiG~-G~~G~~la~~L~~~g~--~v~vid~~~~~--~~~~~~~g--~~~i-~gd~~~~~~l~~a~i~~ad~vi~~   78 (140)
T 3fwz_A            7 CNHALLVGY-GRVGSLLGEKLLASDI--PLVVIETSRTR--VDELRERG--VRAV-LGNAANEEIMQLAHLECAKWLILT   78 (140)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTC--CEEEEESCHHH--HHHHHHTT--CEEE-ESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred             CCCEEEECc-CHHHHHHHHHHHHCCC--CEEEEECCHHH--HHHHHHcC--CCEE-ECCCCCHHHHHhcCcccCCEEEEE
Confidence            358999999 9999999999999888  99999997622  22233221  1211 1111232   11 25789999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      .+..           ..|..    ++..+++..|+..++.-.|
T Consensus        79 ~~~~-----------~~n~~----~~~~a~~~~~~~~iiar~~  106 (140)
T 3fwz_A           79 IPNG-----------YEAGE----IVASARAKNPDIEIIARAH  106 (140)
T ss_dssp             CSCH-----------HHHHH----HHHHHHHHCSSSEEEEEES
T ss_pred             CCCh-----------HHHHH----HHHHHHHHCCCCeEEEEEC
Confidence            5321           33433    3445666778877666554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.07  E-value=0.0016  Score=59.47  Aligned_cols=154  Identities=18%  Similarity=0.247  Sum_probs=86.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d---~~~al-------~  108 (353)
                      +.+.|+||+|.+|.+++..|++.|.  +|+++|+++  ......++....  ..+..+ ..-+|   .++++       .
T Consensus        29 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           29 QVAIVTGASRGIGRAIALELARRGA--MVIGTATTEAGAEGIGAAFKQAG--LEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4788889999999999999999998  999999876  233333343221  111111 11122   22223       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..||.....   ..+   ....+..|+.....+.+.+    .+. ..+.||++|....           . .+.
T Consensus       105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~-----------~-~~~  171 (270)
T 3ftp_A          105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKA-RGGRIVNITSVVG-----------S-AGN  171 (270)
T ss_dssp             CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHH-----------H-HCC
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhh-----------C-CCC
Confidence            789999999865321   122   2345566766555555544    333 4566777654210           0 123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       172 ~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  205 (270)
T 3ftp_A          172 PGQVNYAAAKAGVAGMTRALAREIG--SRGITVNCV  205 (270)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHHh--hhCeEEEEE
Confidence            3333455544444456677777763  334444433

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=97.07  E-value=0.0011  Score=66.34  Aligned_cols=98  Identities=13%  Similarity=0.123  Sum_probs=65.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc-CCCCCeEEEEeCCCchhhhhCC---CcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQLENALTG---MDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~-~~~~~~v~~~~~t~d~~~al~~---ADiVIi~a  117 (353)
                      .||+|||+ |.+|+.++..|+..|+  +|.++|+++.+.  .++.. ......+.   .++++++++++   +|+||++.
T Consensus        11 ~~IgvIGl-G~MG~~lA~~La~~G~--~V~v~dr~~~~~--~~l~~~~~~~~gi~---~~~s~~e~v~~l~~aDvVil~V   82 (497)
T 2p4q_A           11 ADFGLIGL-AVMGQNLILNAADHGF--TVCAYNRTQSKV--DHFLANEAKGKSII---GATSIEDFISKLKRPRKVMLLV   82 (497)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSSHHH--HHHHHTTTTTSSEE---CCSSHHHHHHTSCSSCEEEECC
T ss_pred             CCEEEEee-HHHHHHHHHHHHHCCC--EEEEEeCCHHHH--HHHHcccccCCCeE---EeCCHHHHHhcCCCCCEEEEEc
Confidence            48999999 9999999999999998  899999987222  22222 10011233   24567777766   99999985


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCC
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVN  162 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~  162 (353)
                      ..+               +.++++++.+..+. |+.+||..+|-..
T Consensus        83 p~~---------------~~v~~vl~~l~~~l~~g~iIId~s~~~~  113 (497)
T 2p4q_A           83 KAG---------------APVDALINQIVPLLEKGDIIIDGGNSHF  113 (497)
T ss_dssp             CSS---------------HHHHHHHHHHGGGCCTTCEEEECSCCCH
T ss_pred             CCh---------------HHHHHHHHHHHHhCCCCCEEEECCCCCh
Confidence            321               11445556666655 5677777777543

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=97.07  E-value=0.00079  Score=60.74  Aligned_cols=151  Identities=15%  Similarity=0.159  Sum_probs=83.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++.     ..+..+. .-+|   .++++       .
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   73 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH--KVIATGRRQERLQELKDELG-----DNLYIAQLDVRNRAAIEEMLASLPAEWC   73 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHTSCTTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            3788999999999999999999997  899999875  222222232     1122211 1122   22222       3


Q ss_pred             CCcEEEEcCCCCC--CC--CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPR--KP--GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~--~~--g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..+|...  .+  ..+   ....+..|+....    .+.+.+.+. ..+.||++|.....            .+
T Consensus        74 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~------------~~  140 (248)
T 3asu_A           74 NIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVER-NHGHIINIGSTAGS------------WP  140 (248)
T ss_dssp             CCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGT------------SC
T ss_pred             CCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEccchhc------------cC
Confidence            6899999998652  11  122   2334566755544    444444444 34566666643211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+|..+.  +..|++..+
T Consensus       141 ~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v  175 (248)
T 3asu_A          141 YAGGNVYGATKAFVRQFSLNLRTDLH--GTAVRVTDI  175 (248)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTT--TSCCEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhh--hcCcEEEEE
Confidence            33333444444444456666777763  455654444

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=97.06  E-value=0.0013  Score=60.55  Aligned_cols=156  Identities=16%  Similarity=0.171  Sum_probs=87.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++...  ...+..+.. -+|   .++++       .
T Consensus         9 k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            9 KIAIVTGASSGIGRAAALLFAREGA--KVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4788999999999999999999998  899999876  33333444332  123332211 122   22222       3


Q ss_pred             CCcEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP----GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~----g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..||.....    ..+   ....+..|+.....+.+.+..+   ...+.|++++......           .++
T Consensus        85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  153 (280)
T 3tox_A           85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT-----------AGF  153 (280)
T ss_dssp             CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT-----------BCC
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc-----------CCC
Confidence            789999999864221    122   2344566765555555444322   2356677766543221           123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+|..++  +..|++..+
T Consensus       154 ~~~~~Y~asKaa~~~l~~~la~e~~--~~gIrvn~v  187 (280)
T 3tox_A          154 AGVAPYAASKAGLIGLVQALAVELG--ARGIRVNAL  187 (280)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            3333344444444456677777763  344544444

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.06  E-value=0.0003  Score=63.54  Aligned_cols=151  Identities=19%  Similarity=0.235  Sum_probs=86.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|+++  .+....++...     ...+ ..-+|   .++++       .
T Consensus        10 k~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (248)
T 3op4_A           10 KVALVTGASRGIGKAIAELLAERGA--KVIGTATSESGAQAISDYLGDN-----GKGMALNVTNPESIEAVLKAITDEFG   82 (248)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGG-----EEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhccc-----ceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4788999999999999999999998  899999876  22223333221     1111 01122   22233       3


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..||......   .+   ....+..|+.....+.+.    +.+. ..+.|+++|....           . .+.
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-~~g~iv~isS~~~-----------~-~~~  149 (248)
T 3op4_A           83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKK-RQGRIINVGSVVG-----------T-MGN  149 (248)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHH-----------H-HCC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhh-----------c-CCC
Confidence            7899999998653221   12   234456676655555544    4333 3466666654110           1 123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       150 ~~~~~Y~asK~a~~~l~~~la~e~~--~~gi~vn~v  183 (248)
T 3op4_A          150 AGQANYAAAKAGVIGFTKSMAREVA--SRGVTVNTV  183 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHH--HhCeEEEEE
Confidence            4444455554444556777777764  344544444

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=97.05  E-value=0.0022  Score=60.90  Aligned_cols=65  Identities=23%  Similarity=0.272  Sum_probs=46.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+||+|||+ |.+|.+++..|...|+  +|+++|.+....... .....    +..   + ++++++++||+||++.
T Consensus        16 ~~~I~IIG~-G~mG~alA~~L~~~G~--~V~~~~~~~~~~~~~-a~~~G----~~~---~-~~~e~~~~aDvVilav   80 (338)
T 1np3_A           16 GKKVAIIGY-GSQGHAHACNLKDSGV--DVTVGLRSGSATVAK-AEAHG----LKV---A-DVKTAVAAADVVMILT   80 (338)
T ss_dssp             TSCEEEECC-SHHHHHHHHHHHHTTC--CEEEECCTTCHHHHH-HHHTT----CEE---E-CHHHHHHTCSEEEECS
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHCcC--EEEEEECChHHHHHH-HHHCC----CEE---c-cHHHHHhcCCEEEEeC
Confidence            358999998 9999999999999887  889999876321111 11111    122   1 4568899999999985

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=97.05  E-value=0.0016  Score=58.81  Aligned_cols=158  Identities=14%  Similarity=0.126  Sum_probs=89.5

Q ss_pred             CCCeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCc---hhhhh------
Q 018618           40 AGFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ---LENAL------  107 (353)
Q Consensus        40 ~~~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d---~~~al------  107 (353)
                      +.++|.|+||+  |.+|.+++..|++.|.  +|+++|+++ ......++........... ..-+|   .++.+      
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAEFGSELVFP-CDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCCEEE-CCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHHcCCcEEEE-CCCCCHHHHHHHHHHHHHH
Confidence            34589999998  8999999999999998  899999876 2222333321110111111 01122   22233      


Q ss_pred             -CCCcEEEEcCCCCCC-----C--C-CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHH
Q 018618          108 -TGMDLVIIPAGVPRK-----P--G-MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~-----~--g-~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                       ..-|++|..||....     +  . .+   ....+..|+.....+.+.+..+- +.+.|+++|.....           
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~-----------  158 (271)
T 3ek2_A           90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAE-----------  158 (271)
T ss_dssp             CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGT-----------
T ss_pred             cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccc-----------
Confidence             367999999986432     1  1 22   23456678777777777766543 35566666543211           


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                       .+.|..-.++.+......+-+.+++.++  +..|++..+
T Consensus       159 -~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v  195 (271)
T 3ek2_A          159 -RAIPNYNTMGLAKAALEASVRYLAVSLG--AKGVRVNAI  195 (271)
T ss_dssp             -SBCTTTTHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEE
T ss_pred             -cCCCCccchhHHHHHHHHHHHHHHHHHH--hcCcEEEEE
Confidence             1233333455544444456667777763  344544444

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.05  E-value=0.0027  Score=57.93  Aligned_cols=116  Identities=21%  Similarity=0.251  Sum_probs=69.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--------------cHHHHHHHhcCCCCCeEEEEe-CCCc---
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------------TPGVTADISHMDTGAVVRGFL-GQPQ---  102 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--------------~~~~~~dl~~~~~~~~v~~~~-~t~d---  102 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|++.              ......++...  ...+..+. .-+|   
T Consensus        13 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A           13 GKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRDRES   88 (278)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTCHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCCHHH
Confidence            35899999999999999999999998  899999862              11112222221  12233221 1122   


Q ss_pred             hhhhhC-------CCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHH----HHHHHhhCCCcEEEEecCC
Q 018618          103 LENALT-------GMDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTL----CEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       103 ~~~al~-------~ADiVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i----~~~i~~~~p~a~viv~tNP  160 (353)
                      .+++++       ..|++|..||......  .+....+..|+.....+    .+.+.+....+.||++|.-
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  159 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSS  159 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccH
Confidence            223333       7899999998653221  12234456666544444    4445555556777777643

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.04  E-value=0.00098  Score=60.35  Aligned_cols=67  Identities=18%  Similarity=0.257  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+|||+|||+ |.+|..++..|...|.  +|.++|+++...  .++.... .  +.   ..++++++++++|+||++.
T Consensus         2 ~~m~i~iiG~-G~mG~~~a~~l~~~g~--~v~~~~~~~~~~--~~~~~~~-g--~~---~~~~~~~~~~~~D~Vi~~v   68 (259)
T 2ahr_A            2 NAMKIGIIGV-GKMASAIIKGLKQTPH--ELIISGSSLERS--KEIAEQL-A--LP---YAMSHQDLIDQVDLVILGI   68 (259)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTSSC--EEEEECSSHHHH--HHHHHHH-T--CC---BCSSHHHHHHTCSEEEECS
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhCCC--eEEEECCCHHHH--HHHHHHc-C--CE---eeCCHHHHHhcCCEEEEEe
Confidence            3579999998 9999999999988875  899999875221  1122100 0  11   1346778889999999985

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.04  E-value=0.0044  Score=56.39  Aligned_cols=156  Identities=14%  Similarity=0.142  Sum_probs=84.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.... ...+..+. .-+|   .++++       .
T Consensus        22 k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           22 RVALVTGGSRGLGFGIAQGLAEAGC--SVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999997  899999875  222233331110 11222221 1122   22222       3


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCC-CchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPV-NSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv-~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..+|......   .+   ....+..|+.....+++.+..+   ...+.||++|... ...            +.
T Consensus        99 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~------------~~  166 (267)
T 1vl8_A           99 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV------------TM  166 (267)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC------------CS
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc------------CC
Confidence            7899999998653211   22   2344566766665555544322   2345666665432 211            12


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+++.++  +..|++.++
T Consensus       167 ~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v  200 (267)
T 1vl8_A          167 PNISAYAASKGGVASLTKALAKEWG--RYGIRVNVI  200 (267)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            2222334443334456666777663  334544443

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.04  E-value=0.00094  Score=54.56  Aligned_cols=70  Identities=13%  Similarity=0.158  Sum_probs=45.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCch---hh-hhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQL---EN-ALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~---~~-al~~ADiVIi~  116 (353)
                      +++|.|+|+ |.+|+.++..|...|+  +++++|.++..  ...+.+... ..+..  ..+|.   ++ .+.++|+||++
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~--~V~~id~~~~~--~~~~~~~~~-~~~~g--d~~~~~~l~~~~~~~~d~vi~~   77 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGK--KVLAVDKSKEK--IELLEDEGF-DAVIA--DPTDESFYRSLDLEGVSAVLIT   77 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC--CEEEEESCHHH--HHHHHHTTC-EEEEC--CTTCHHHHHHSCCTTCSEEEEC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--eEEEEECCHHH--HHHHHHCCC-cEEEC--CCCCHHHHHhCCcccCCEEEEe
Confidence            458999999 9999999999999988  99999987621  222222211 11111  12332   11 24689999998


Q ss_pred             CC
Q 018618          117 AG  118 (353)
Q Consensus       117 ag  118 (353)
                      .+
T Consensus        78 ~~   79 (141)
T 3llv_A           78 GS   79 (141)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=97.04  E-value=0.0014  Score=60.92  Aligned_cols=97  Identities=12%  Similarity=0.118  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhC-----C-CCcEEEEEeCCCcHHHHHHHhc-CCC---C--C-----eEEEEeCCCch
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKIN-----P-LVSVLHLYDVVNTPGVTADISH-MDT---G--A-----VVRGFLGQPQL  103 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~-----~-~~~el~L~D~~~~~~~~~dl~~-~~~---~--~-----~v~~~~~t~d~  103 (353)
                      +|||+|||+ |.+|+.++..|.+.     | +  +|.++|+ +  .....+.. ...   .  .     .+..   +++.
T Consensus         8 ~m~I~iiG~-G~mG~~~a~~L~~~~~~~~g~~--~V~~~~r-~--~~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~~~   78 (317)
T 2qyt_A            8 PIKIAVFGL-GGVGGYYGAMLALRAAATDGLL--EVSWIAR-G--AHLEAIRAAGGLRVVTPSRDFLARPTCV---TDNP   78 (317)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHTTSSE--EEEEECC-H--HHHHHHHHHTSEEEECSSCEEEECCSEE---ESCH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCccccCCCC--CEEEEEc-H--HHHHHHHhcCCeEEEeCCCCeEEecceE---ecCc
Confidence            479999999 99999999999887     7 6  9999997 3  22222322 110   0  0     0111   1343


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCc
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNS  163 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~  163 (353)
                       ++++++|+||++.....                +.++++.+..+- |+..|+.++|..+.
T Consensus        79 -~~~~~~D~vil~vk~~~----------------~~~v~~~i~~~l~~~~~iv~~~nG~~~  122 (317)
T 2qyt_A           79 -AEVGTVDYILFCTKDYD----------------MERGVAEIRPMIGQNTKILPLLNGADI  122 (317)
T ss_dssp             -HHHCCEEEEEECCSSSC----------------HHHHHHHHGGGEEEEEEEEECSCSSSH
T ss_pred             -cccCCCCEEEEecCccc----------------HHHHHHHHHhhcCCCCEEEEccCCCCc
Confidence             56789999999863221                234555665543 56777777887654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.03  E-value=0.002  Score=58.53  Aligned_cols=153  Identities=16%  Similarity=0.099  Sum_probs=85.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++.  ......++....  ..+..+. .-+|.   ++++       .
T Consensus        12 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A           12 KVVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             CEEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4799999999999999999999998  899999876  333344444322  2222221 11222   2222       3


Q ss_pred             CCcEEEEcCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRK--P--GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~--~--g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..+|....  +  ..+   ....+..|+.....+++.    +.+.  .+.||++|.-...            .+
T Consensus        88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~------------~~  153 (264)
T 3ucx_A           88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEES--KGAVVNVNSMVVR------------HS  153 (264)
T ss_dssp             CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHH--TCEEEEECCGGGG------------CC
T ss_pred             CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEECcchhc------------cC
Confidence            78999999976321  1  122   233455666555555544    4433  2666666543211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       154 ~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~vn~v  188 (264)
T 3ucx_A          154 QAKYGAYKMAKSALLAMSQTLATELG--EKGIRVNSV  188 (264)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEE
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEE
Confidence            23223344443334456667777763  344544443

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.01  E-value=0.0026  Score=57.46  Aligned_cols=155  Identities=14%  Similarity=0.126  Sum_probs=85.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH---HHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP---GVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~---~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++...   ....++.... ...+..+. .-+|   .++++       
T Consensus         5 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            5 KVAVVTGSTSGIGLGIATALAAQGA--DIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHcCC--EEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999998  89999987622   1222232110 11222221 1122   22223       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ...|++|..+|.....   ..+   ....+..|+....    .+.+.+++.. .+.||++|......            +
T Consensus        82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------~  148 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV------------A  148 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------------C
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCc------------C
Confidence            3789999999865321   122   2344566766444    4444444433 46677766432111            2


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.++..+.  +..|++..+
T Consensus       149 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  183 (260)
T 1x1t_A          149 SANKSAYVAAKHGVVGFTKVTALETA--GQGITANAI  183 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEE
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhc--cCCEEEEEE
Confidence            23333344444444456667777763  344544433

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=97.01  E-value=0.0044  Score=55.52  Aligned_cols=155  Identities=17%  Similarity=0.182  Sum_probs=88.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|.+.   .+....++....  ..+..+. .-+|   .+++++      
T Consensus         5 k~~lVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            5 KSALVTGASRGIGRSIALQLAEEGY--NVAVNYAGSKEKAEAVVEEIKAKG--VDSFAIQANVADADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4788999999999999999999998  888988755   233333444322  2222221 1122   222333      


Q ss_pred             -CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 -GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 -~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                       ..|++|..||.....   ..+   ....+..|+.....+.+.+    .+. ..+.||++|.-..           . .+
T Consensus        81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~~g~iv~isS~~~-----------~-~~  147 (246)
T 3osu_A           81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQ-RSGAIINLSSVVG-----------A-VG  147 (246)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHH-----------H-HC
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEEcchhh-----------c-CC
Confidence             789999999865321   122   2335666766555555554    444 3456666654110           1 12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+......+-+.+|+.++  +..|++..+.
T Consensus       148 ~~~~~~Y~~sK~a~~~~~~~la~e~~--~~gi~vn~v~  183 (246)
T 3osu_A          148 NPGQANYVATKAGVIGLTKSAARELA--SRGITVNAVA  183 (246)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEE
Confidence            44444555555445566777777764  3445544443

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.01  E-value=0.0011  Score=60.40  Aligned_cols=151  Identities=19%  Similarity=0.291  Sum_probs=82.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  .|++.|++.  ......++.     ..+..+. .-+|.   +++       +.
T Consensus        28 k~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (266)
T 3grp_A           28 RKALVTGATGGIGEAIARCFHAQGA--IVGLHGTREDKLKEIAADLG-----KDVFVFSANLSDRKSIKQLAEVAEREME  100 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhC-----CceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999997  899999876  222222221     1222221 11222   222       23


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..||.....   ..+   ....+..|+..    .+.+.+.+.+. ..+.||++|.-....            +.
T Consensus       101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~Iv~isS~~~~~------------~~  167 (266)
T 3grp_A          101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRR-RYGRIINITSIVGVV------------GN  167 (266)
T ss_dssp             SCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCC------------------
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcEEEEECCHHHcC------------CC
Confidence            789999999865321   122   33445677766    55555555544 346666666533211            12


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       168 ~~~~~Y~asKaa~~~~~~~la~e~~--~~gI~vn~v  201 (266)
T 3grp_A          168 PGQTNYCAAKAGLIGFSKALAQEIA--SRNITVNCI  201 (266)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCchhHHHHHHHHHHHHHHHHHHhh--hhCcEEEEE
Confidence            2222334443334456677777764  334444333

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.01  E-value=0.0086  Score=53.40  Aligned_cols=110  Identities=15%  Similarity=0.220  Sum_probs=66.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeE-EEEe-CCCc---hhhhh------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVV-RGFL-GQPQ---LENAL------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v-~~~~-~t~d---~~~al------~  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++..  .....++.     ..+ ..+. .-+|   .++++      .
T Consensus        12 k~vlITGasggiG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (254)
T 2wsb_A           12 ACAAVTGAGSGIGLEICRAFAASGA--RLILIDREAAALDRAAQELG-----AAVAARIVADVTDAEAMTAAAAEAEAVA   84 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHG-----GGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc-----ccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence            4899999999999999999999987  8999998752  22222331     111 2111 1122   22222      5


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +.|+||..+|.....   ..+   ....+..|+..    .+.+.+.+++.. .+.++++|.
T Consensus        85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS  144 (254)
T 2wsb_A           85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGS  144 (254)
T ss_dssp             CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEec
Confidence            789999999865321   122   23455667666    444444444443 456666654

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=97.00  E-value=0.0041  Score=61.09  Aligned_cols=108  Identities=15%  Similarity=0.218  Sum_probs=66.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--C--------------CCeEEEEeCCCchh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--T--------------GAVVRGFLGQPQLE  104 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--~--------------~~~v~~~~~t~d~~  104 (353)
                      ..|.+|||. |+||..+|..|+..|+  +|+++|+++.  .+..|....  .              ...+..   ++|  
T Consensus        11 ~~~~~ViGl-GyvGlp~A~~La~~G~--~V~~~D~~~~--kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~---ttd--   80 (431)
T 3ojo_A           11 GSKLTVVGL-GYIGLPTSIMFAKHGV--DVLGVDINQQ--TIDKLQNGQISIEEPGLQEVYEEVLSSGKLKV---STT--   80 (431)
T ss_dssp             -CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ESS--
T ss_pred             CCccEEEee-CHHHHHHHHHHHHCCC--EEEEEECCHH--HHHHHHCCCCCcCCCCHHHHHHhhcccCceEE---eCc--
Confidence            469999999 9999999999999998  9999999862  222333321  0              122443   234  


Q ss_pred             hhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEe-cCCCCch
Q 018618          105 NALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLI-SNPVNST  164 (353)
Q Consensus       105 ~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~-tNPv~~~  164 (353)
                        +++||+||++.+.|.......    .-++..+...++.+.++. |..+|+.- |-|....
T Consensus        81 --~~~aDvvii~VpTp~~~~~~~----~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt  136 (431)
T 3ojo_A           81 --PEASDVFIIAVPTPNNDDQYR----SCDISLVMRALDSILPFLKKGNTIIVESTIAPKTM  136 (431)
T ss_dssp             --CCCCSEEEECCCCCBCSSSSC----BBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHH
T ss_pred             --hhhCCEEEEEeCCCccccccC----CccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHH
Confidence              468999999987775332000    112333455556666655 45554443 3555543

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.00  E-value=0.0014  Score=59.40  Aligned_cols=145  Identities=10%  Similarity=0.100  Sum_probs=84.5

Q ss_pred             CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhhC------
Q 018618           42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL-GQPQ---LENALT------  108 (353)
Q Consensus        42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al~------  108 (353)
                      +++.|+||+  |.+|.+++..|++.|.  +|+++|+++ ......++......  +..+. .-+|   .+++++      
T Consensus         9 k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            9 KKALVMGVTNQRSLGFAIAAKLKEAGA--EVALSYQAERLRPEAEKLAEALGG--ALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CEEEEESCCSSSSHHHHHHHHHHHHTC--EEEEEESCGGGHHHHHHHHHHTTC--CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhcCC--cEEEECCCCCHHHHHHHHHHHHHHc
Confidence            479999998  8999999999999887  899999876 22233333221101  11111 1122   223333      


Q ss_pred             -CCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          109 -GMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       109 -~ADiVIi~ag~~~~-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                       ..|++|..+|....     +  ..+   ....+..|+.....+++.+..+- +.+.||++|.....            .
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------------~  152 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE------------K  152 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT------------S
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEeccccc------------C
Confidence             78999999986532     1  122   33456778888888877776542 23567776642211            1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHh
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      +.+..-.++.+......+-+.+|+.+
T Consensus       153 ~~~~~~~Y~asK~a~~~~~~~la~e~  178 (261)
T 2wyu_A          153 VVPKYNVMAIAKAALEASVRYLAYEL  178 (261)
T ss_dssp             BCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHH
Confidence            22333334444444445666777776

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=96.99  E-value=0.0034  Score=56.94  Aligned_cols=145  Identities=14%  Similarity=0.118  Sum_probs=82.5

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------C
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------T  108 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------~  108 (353)
                      +|.|+||+|.+|.+++..|++.|.  ++++.+.+.   ......++....  ..+..+. .-+|.   ++++       .
T Consensus        28 ~vlVTGas~gIG~~la~~l~~~G~--~v~i~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           28 SVLVTGASKGIGRAIARQLAADGF--NIGVHYHRDAAGAQETLNAIVANG--GNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            799999999999999999999998  776665444   222333443322  2233221 11232   2223       3


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..+|......   .+   ....+..|+.....+.+.    +.+....+.||++|....           . .+.
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~-----------~-~~~  171 (267)
T 4iiu_A          104 AWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSG-----------V-MGN  171 (267)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHH-----------H-HCC
T ss_pred             CccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHh-----------c-cCC
Confidence            7899999998653221   12   234456676555544443    333455677777765211           1 123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhC
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +..-.++.+......+-+.+++.+.
T Consensus       172 ~~~~~Y~asKaa~~~~~~~la~e~~  196 (267)
T 4iiu_A          172 RGQVNYSAAKAGIIGATKALAIELA  196 (267)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHh
Confidence            4344455554444456677777763

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.98  E-value=0.003  Score=56.60  Aligned_cols=111  Identities=14%  Similarity=0.167  Sum_probs=65.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCchh------hhhCCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQLE------NALTGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d~~------~al~~ADiVI  114 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|+++..  ..++...   ..+..+. .-+|.+      +.+...|++|
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~--~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~lv   79 (246)
T 2ag5_A            7 KVIILTAAAQGIGQAAALAFAREGA--KVIATDINESK--LQELEKY---PGIQTRVLDVTKKKQIDQFANEVERLDVLF   79 (246)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHH--HGGGGGS---TTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHH--HHHHHhc---cCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence            4799999999999999999999997  99999986521  1112211   1222221 112321      1245789999


Q ss_pred             EcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCC
Q 018618          115 IPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNP  160 (353)
Q Consensus       115 i~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNP  160 (353)
                      ..+|.....   ..+   ....+..|+.....+++.    +.+. ..+.|+++|..
T Consensus        80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~~g~iv~isS~  134 (246)
T 2ag5_A           80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSV  134 (246)
T ss_dssp             ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCS
T ss_pred             ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEech
Confidence            999865321   122   223455666555555444    4333 34667776653

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.97  E-value=0.0047  Score=56.57  Aligned_cols=155  Identities=16%  Similarity=0.228  Sum_probs=85.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCch---hhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL---ENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~al-------~  108 (353)
                      ++|.|+||+|.+|..++..|++.|.  +|+++++++  ......++....  ..+..+.. -+|.   ++++       .
T Consensus        45 k~vlITGasggIG~~la~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           45 KVALVTGAGRGIGREIAKMLAKSVS--HVICISRTQKSCDSVVDEIKSFG--YESSGYAGDVSKKEEISEVINKILTEHK  120 (285)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTTSS--EEEEEESSHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHHHHHhcC--CceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999887  899988765  233333444321  23332211 1232   2222       4


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      +.|+||..+|.....   ..+   ..+.+..|+....    .+.+.+.+.. .+.||++|....           .. +.
T Consensus       121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~-----------~~-~~  187 (285)
T 2c07_A          121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVG-----------LT-GN  187 (285)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHH-----------HH-CC
T ss_pred             CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhh-----------cc-CC
Confidence            789999999865321   122   3345566766644    4444444333 456666664321           00 22


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +..-.++.+......+-+.+++.+.  +..+++.++.
T Consensus       188 ~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v~  222 (285)
T 2c07_A          188 VGQANYSSSKAGVIGFTKSLAKELA--SRNITVNAIA  222 (285)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHH--HhCcEEEEEE
Confidence            3333444444334445566666653  3344444443

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.96  E-value=0.0028  Score=56.91  Aligned_cols=115  Identities=15%  Similarity=0.186  Sum_probs=66.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.... ...+..+.. -+|   +++++       .
T Consensus        15 k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           15 KTIIVTGGNRGIGLAFTRAVAAAGA--NVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--eEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999987  999999865  222222332110 122222211 122   22222       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHH----hhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIA----KCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~----~~~p~a~viv~tN  159 (353)
                      ..|+||..+|.....   ..+   ....+..|+.....+.+.+.    +....+.||++|.
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS  152 (265)
T 1h5q_A           92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSS  152 (265)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCC
Confidence            589999999865321   112   23345667665555555543    3333466666654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.95  E-value=0.008  Score=53.46  Aligned_cols=140  Identities=13%  Similarity=0.146  Sum_probs=78.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhh-------hhCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLEN-------ALTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~-------al~~ADiV  113 (353)
                      +++.|+||+|.+|..++..|++.|.  +|+++|++... ...++. .   ..+.. ... .+.++       .+.+.|++
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~--~V~~~~r~~~~-~~~~~~-~---~~~~~D~~~-~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGY--RVAIASRNPEE-AAQSLG-A---VPLPTDLEK-DDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHH-HHHHHT-C---EEEECCTTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHH-HHHhhC-c---EEEecCCch-HHHHHHHHHHHHHcCCCCEE
Confidence            4799999999999999999999997  89999987632 222221 1   00110 001 22222       34589999


Q ss_pred             EEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC--CCC
Q 018618          114 IIPAGVPRKP---GMT---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY--DPK  181 (353)
Q Consensus       114 Ii~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~--~~~  181 (353)
                      |..+|.....   ..+   ....+..|+.....+.+    .+++.. .+.||++|......            +.  ++.
T Consensus        75 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------~~~~~~~  141 (239)
T 2ekp_A           75 VHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFT------------AGGPVPI  141 (239)
T ss_dssp             EECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------------CCTTSCC
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcc------------CCCCCCC
Confidence            9999864321   122   23345556555444444    444433 45666666432111            11  222


Q ss_pred             ceEeechhhHHHHHHHHHHHh
Q 018618          182 KLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l  202 (353)
                      -.++.+......+-+.+++.+
T Consensus       142 ~~Y~~sK~a~~~~~~~la~e~  162 (239)
T 2ekp_A          142 PAYTTAKTALLGLTRALAKEW  162 (239)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHh
Confidence            334444444445666677766

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=96.94  E-value=0.0032  Score=58.85  Aligned_cols=65  Identities=22%  Similarity=0.381  Sum_probs=49.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ++||++||- |.+|+.+|..|+..|+  +|+.+|+++  ..+.++....    .+.   ..++.++.++||+||.+-
T Consensus         3 M~kIgfIGl-G~MG~~mA~~L~~~G~--~v~v~dr~~--~~~~~l~~~G----a~~---a~s~~e~~~~~dvv~~~l   67 (300)
T 3obb_A            3 MKQIAFIGL-GHMGAPMATNLLKAGY--LLNVFDLVQ--SAVDGLVAAG----ASA---ARSARDAVQGADVVISML   67 (300)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTC--EEEEECSSH--HHHHHHHHTT----CEE---CSSHHHHHTTCSEEEECC
T ss_pred             cCEEEEeee-hHHHHHHHHHHHhCCC--eEEEEcCCH--HHHHHHHHcC----CEE---cCCHHHHHhcCCceeecC
Confidence            459999999 9999999999999998  999999875  2233344322    111   245788999999999973

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.93  E-value=0.0042  Score=56.63  Aligned_cols=155  Identities=14%  Similarity=0.118  Sum_probs=90.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      +.+.|+||+|.+|.+++..|++.|.  +|++.+.+.   .+....++....  ..+..+. .-+|   .++++       
T Consensus        28 k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           28 KVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3789999999999999999999998  888876544   223333343322  2222221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          108 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      ...|++|..||......   .+   ....+..|+.....+++.+..+- +.+.||++|....          ..  +.|.
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~----------~~--~~~~  171 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQV----------GL--LHPS  171 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHH----------HH--CCTT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhh----------cc--CCCC
Confidence            37899999998653211   12   33455678777777766665443 3467777664211          01  2333


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .-.++.+......+-+.+|..++  +..|++..+
T Consensus       172 ~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  203 (267)
T 3u5t_A          172 YGIYAAAKAGVEAMTHVLSKELR--GRDITVNAV  203 (267)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT--TSCCEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHhh--hhCCEEEEE
Confidence            34455555455567778888874  455554444

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.93  E-value=0.002  Score=58.91  Aligned_cols=116  Identities=14%  Similarity=0.168  Sum_probs=67.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeC-CCch---hhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLG-QPQL---ENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~-t~d~---~~al-------  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++..... ...+..+.. -+|.   ++++       
T Consensus         7 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            7 KTVIITGSSNGIGRTTAILFAQEGA--NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999997  899999876  2223334433211 013333211 1232   2223       


Q ss_pred             CCCcEEEEcCCCCCC-C------CCC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRK-P------GMT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~-~------g~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  159 (353)
                      ...|++|..+|.... +      ..+   ....+..|+.....+++.+..+-  ..+.||++|.
T Consensus        85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS  148 (280)
T 1xkq_A           85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSS  148 (280)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecC
Confidence            368999999986432 1      112   23345667655555555444321  1166676654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.91  E-value=0.01  Score=54.79  Aligned_cols=146  Identities=15%  Similarity=0.091  Sum_probs=88.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeC-CCch---hhh------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFLG-QPQL---ENA------  106 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~a------  106 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|++.|.+.    .......+....  ..+..+.. -+|.   +++      
T Consensus        49 ~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           49 DRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999998  899999863    111222233221  22332211 1221   122      


Q ss_pred             -hCCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          107 -LTGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       107 -l~~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                       +...|++|..+|.....+    .+   ....+..|+.....+.+.+...- ..+.||++|.-...            .+
T Consensus       125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~------------~~  192 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAY------------QP  192 (294)
T ss_dssp             HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGT------------SC
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhc------------cC
Confidence             347899999998643211    22   34567788888888888877664 34677776643211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHh
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      .+..-.++.+......+-+.+|+.+
T Consensus       193 ~~~~~~Y~asKaa~~~l~~~la~e~  217 (294)
T 3r3s_A          193 SPHLLDYAATKAAILNYSRGLAKQV  217 (294)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHH
Confidence            3333344554444455667777776

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=96.91  E-value=0.0027  Score=59.18  Aligned_cols=63  Identities=19%  Similarity=0.293  Sum_probs=43.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ||++||- |.+|+.+|..|+..|+  +|+.+|+++.+  +.++...    ....   ..++.++++++|+||++.
T Consensus         7 kIgfIGL-G~MG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~----G~~~---~~s~~e~~~~~dvvi~~l   69 (297)
T 4gbj_A            7 KIAFLGL-GNLGTPIAEILLEAGY--ELVVWNRTASK--AEPLTKL----GATV---VENAIDAITPGGIVFSVL   69 (297)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTC--EEEEC---------CTTTTT----TCEE---CSSGGGGCCTTCEEEECC
T ss_pred             cEEEEec-HHHHHHHHHHHHHCCC--eEEEEeCCHHH--HHHHHHc----CCeE---eCCHHHHHhcCCceeeec
Confidence            8999999 9999999999999998  99999987622  1122221    1222   245678899999999974

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.91  E-value=0.0036  Score=56.40  Aligned_cols=155  Identities=16%  Similarity=0.078  Sum_probs=87.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHh---CCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh----C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKI---NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL----T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~---~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al----~  108 (353)
                      +++.|+||+|.+|.+++..|++   .|.  +|+++|++.  ......++........+..+. .-+|.   ++++    +
T Consensus         7 k~~lVTGas~gIG~~ia~~l~~~~~~G~--~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            7 AVCVLTGASRGFGRALAPQLARLLSPGS--VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTC--EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cEEEEeCCCChHHHHHHHHHHHhhcCCC--eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            4788999999999999999998   677  999999876  233333343211112333321 11222   1222    1


Q ss_pred             -----CCc--EEEEcCCCCCCC-C-----CC---HHHHHHHHHHHHHHHHHHHHhhC-----CCcEEEEecCCCCchhHH
Q 018618          109 -----GMD--LVIIPAGVPRKP-G-----MT---RDDLFNINAGIVRTLCEGIAKCC-----PNATVNLISNPVNSTVPI  167 (353)
Q Consensus       109 -----~AD--iVIi~ag~~~~~-g-----~~---r~~~~~~N~~i~~~i~~~i~~~~-----p~a~viv~tNPv~~~t~~  167 (353)
                           .-|  ++|..+|..... +     .+   ....+..|+.....+++.+..+-     ..+.||++|.-...    
T Consensus        85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~----  160 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCAL----  160 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGT----
T ss_pred             ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhc----
Confidence                 347  999999864321 1     22   23456778877777777665443     23567777653221    


Q ss_pred             HHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          168 AAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       168 ~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                              .+.+..-.++.+......+-+.+|..+.  +  |++..+
T Consensus       161 --------~~~~~~~~Y~asKaa~~~~~~~la~e~~--~--i~vn~v  195 (259)
T 1oaa_A          161 --------QPYKGWGLYCAGKAARDMLYQVLAAEEP--S--VRVLSY  195 (259)
T ss_dssp             --------SCCTTCHHHHHHHHHHHHHHHHHHHHCT--T--EEEEEE
T ss_pred             --------CCCCCccHHHHHHHHHHHHHHHHHhhCC--C--ceEEEe
Confidence                    1233333445544444456677777774  2  554444

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.90  E-value=0.0053  Score=55.74  Aligned_cols=146  Identities=10%  Similarity=0.079  Sum_probs=80.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al-------  107 (353)
                      +.+.|+||+|.+|.+++..|+..|.  .|++.|.+.   .......+....  ..+..+. .-+|.   ++++       
T Consensus        26 k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           26 RVAFVTGGMGGLGAAISRRLHDAGM--AVAVSHSERNDHVSTWLMHERDAG--RDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC--EEEEEECSCHHHHHHHHHHHHTTT--CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3678889999999999999999998  899999655   122222333221  2222221 11232   2222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ...|++|..||.....   ..+   ....+..|+.....+.+.+..+   ...+.|+++|....           . .+.
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~-----------~-~~~  169 (269)
T 3gk3_A          102 GKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNG-----------S-RGA  169 (269)
T ss_dssp             SCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH-----------H-HCC
T ss_pred             CCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhh-----------c-cCC
Confidence            3789999999865321   122   2334566665555554444321   23466777664211           1 123


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhC
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +..-.++.+......+-+.+++.+.
T Consensus       170 ~~~~~Y~asKaa~~~~~~~la~e~~  194 (269)
T 3gk3_A          170 FGQANYASAKAGIHGFTKTLALETA  194 (269)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHhh
Confidence            3333455544444456677777763

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.90  E-value=0.0044  Score=57.33  Aligned_cols=156  Identities=12%  Similarity=0.077  Sum_probs=89.7

Q ss_pred             CeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCc---hhhhh-------C
Q 018618           42 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d---~~~al-------~  108 (353)
                      +++.|+||+|  .+|.+++..|++.|.  +|++.|+++ ......++......... ....-+|   .++++       .
T Consensus        31 k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           31 KKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESLGVKLT-VPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHHTCCEE-EECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhcCCeEE-EEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999976  999999999999998  899999876 22222222111101111 1111122   22222       3


Q ss_pred             CCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..||....     +  ..+   ....+..|+.....+++.+..+- ..+.||++|.....            .+
T Consensus       108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~------------~~  175 (296)
T 3k31_A          108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAE------------KV  175 (296)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT------------SC
T ss_pred             CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhc------------cC
Confidence            67999999987531     1  222   33456778888888888777654 35677776643211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+|..++  +..|++..+
T Consensus       176 ~~~~~~Y~asKaal~~l~~~la~e~~--~~gIrvn~v  210 (296)
T 3k31_A          176 VPHYNVMGVCKAALEASVKYLAVDLG--KQQIRVNAI  210 (296)
T ss_dssp             CTTTTHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEE
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHHh--hcCcEEEEE
Confidence            33333445544444456677777774  344544433

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.90  E-value=0.0064  Score=55.78  Aligned_cols=76  Identities=14%  Similarity=0.135  Sum_probs=51.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----hh-------hh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----EN-------AL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----~~-------al  107 (353)
                      ++|.|+||+|.+|.+++..|+..|.  +|++.|++.  ......++.... ...+..+. .-+|.    ++       .+
T Consensus        13 k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           13 RCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             cEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            4789999999999999999999998  999999876  333344554432 22333321 11232    11       13


Q ss_pred             CCCcEEEEcCCCC
Q 018618          108 TGMDLVIIPAGVP  120 (353)
Q Consensus       108 ~~ADiVIi~ag~~  120 (353)
                      ...|++|..||..
T Consensus        90 g~iD~lv~nAg~~  102 (311)
T 3o26_A           90 GKLDILVNNAGVA  102 (311)
T ss_dssp             SSCCEEEECCCCC
T ss_pred             CCCCEEEECCccc
Confidence            4899999999864

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.89  E-value=0.0032  Score=56.59  Aligned_cols=146  Identities=16%  Similarity=0.142  Sum_probs=81.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE-eCCCc---hhhhh-------CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ---LENAL-------TGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~-~~t~d---~~~al-------~~A  110 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++...      ...  .  +..+ ..-+|   .++++       ...
T Consensus         8 k~vlVTGas~giG~~ia~~l~~~G~--~V~~~~r~~~~------~~~--~--~~~~~~D~~d~~~~~~~~~~~~~~~g~i   75 (250)
T 2fwm_X            8 KNVWVTGAGKGIGYATALAFVEAGA--KVTGFDQAFTQ------EQY--P--FATEVMDVADAAQVAQVCQRLLAETERL   75 (250)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCCCS------SCC--S--SEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCchhh------hcC--C--ceEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4899999999999999999999997  89999987521      110  1  1111 01122   22333       378


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..+|.....   ..+   ....+..|+.....+++.+    ++.. .+.||++|.....            .+.+.
T Consensus        76 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~------------~~~~~  142 (250)
T 2fwm_X           76 DALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAH------------TPRIG  142 (250)
T ss_dssp             CEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT------------SCCTT
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhC------------CCCCC
Confidence            9999999864321   122   2344566665555554444    4443 4566666542211            12222


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .-.++.+......+-+.+++.+.  +..|++.++
T Consensus       143 ~~~Y~~sK~a~~~~~~~la~e~~--~~gi~v~~v  174 (250)
T 2fwm_X          143 MSAYGASKAALKSLALSVGLELA--GSGVRCNVV  174 (250)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHhC--ccCCEEEEE
Confidence            33344443344456666776652  334444433

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.88  E-value=0.0061  Score=55.28  Aligned_cols=155  Identities=15%  Similarity=0.137  Sum_probs=90.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-----
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-----  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-----  107 (353)
                      +.+.|+||+|.+|.+++..|++.|.  +|+++|...     ......++...  ...+..+.. -+|   .++.+     
T Consensus        12 k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   87 (262)
T 3ksu_A           12 KVIVIAGGIKNLGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFAEK   87 (262)
T ss_dssp             CEEEEETCSSHHHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999998  899988653     22233344432  233333211 123   22222     


Q ss_pred             --CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          108 --TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       108 --~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                        ...|++|..+|......   .+   ....+..|+.....+.+.+..+- +.+.|++++......         -   .
T Consensus        88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~---------~---~  155 (262)
T 3ksu_A           88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA---------Y---T  155 (262)
T ss_dssp             HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH---------H---H
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc---------C---C
Confidence              37899999998653221   22   23456678888777777776542 356677666532111         1   2


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+......+-+.+|..++  +..|++..+
T Consensus       156 ~~~~~Y~asKaa~~~l~~~la~e~~--~~gi~vn~v  189 (262)
T 3ksu_A          156 GFYSTYAGNKAPVEHYTRAASKELM--KQQISVNAI  189 (262)
T ss_dssp             CCCCC-----CHHHHHHHHHHHHTT--TTTCEEEEE
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHH--HcCcEEEEE
Confidence            2334567765555667888888874  344544444

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.88  E-value=0.014  Score=53.09  Aligned_cols=150  Identities=17%  Similarity=0.132  Sum_probs=83.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~A  110 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++...     +..... ..+..+. .-+|   .++++       ...
T Consensus        17 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~-----~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   88 (266)
T 3p19_A           17 KLVVITGASSGIGEAIARRFSEEGH--PLLLLARRVER-----LKALNL-PNTLCAQVDVTDKYTFDTAITRAEKIYGPA   88 (266)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCHHH-----HHTTCC-TTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHH-----HHHhhc-CCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4789999999999999999999998  89999986421     111111 1122111 1122   22223       378


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHH----HHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRKP---GMT---RDDLFNINAGIVRT----LCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~----i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..||.....   ..+   ....+..|+.....    +.+.+++.. .+.||++|.-...            .+.+.
T Consensus        89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~------------~~~~~  155 (266)
T 3p19_A           89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGK------------KTFPD  155 (266)
T ss_dssp             EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGT------------SCCTT
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhC------------CCCCC
Confidence            9999999865321   122   23445667665555    444444443 4566666542211            12333


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .-.++.+......+-+.+|+.++  +..|++..+
T Consensus       156 ~~~Y~asK~a~~~~~~~la~e~~--~~gi~vn~v  187 (266)
T 3p19_A          156 HAAYCGTKFAVHAISENVREEVA--ASNVRVMTI  187 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence            33445444444456677777764  334544444

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.87  E-value=0.0011  Score=59.60  Aligned_cols=149  Identities=14%  Similarity=0.123  Sum_probs=80.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~ADiV  113 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++.....  ++.      .+.. .....+.+++       +...|++
T Consensus        16 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~--~~~------~~~~D~~~~~~~~~~~~~~~~~~g~id~l   85 (247)
T 1uzm_A           16 RSVLVTGGNRGIGLAIAQRLAADGH--KVAVTHRGSGAPK--GLF------GVEVDVTDSDAVDRAFTAVEEHQGPVEVL   85 (247)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSSCCCT--TSE------EEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHH--Hhc------CeeccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4799999999999999999999997  8999998751100  000      0110 0000112222       3467999


Q ss_pred             EEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceE
Q 018618          114 IIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLL  184 (353)
Q Consensus       114 Ii~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kvi  184 (353)
                      |..+|.....   ..+   ....+..|+.....+.+.+..+   ...+.||++|......            +.+..-.+
T Consensus        86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~Y  153 (247)
T 1uzm_A           86 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLW------------GIGNQANY  153 (247)
T ss_dssp             EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----------------CCHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhcc------------CCCCChhH
Confidence            9999865321   122   3345566766555555544332   2346777776543321            12222334


Q ss_pred             eechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          185 GVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +.+......+-+.+++.++  +..|++.++
T Consensus       154 ~~sK~a~~~~~~~la~e~~--~~gi~v~~v  181 (247)
T 1uzm_A          154 AASKAGVIGMARSIARELS--KANVTANVV  181 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhh--hcCcEEEEE
Confidence            4443334445666777663  334444443

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.87  E-value=0.022  Score=52.22  Aligned_cols=156  Identities=13%  Similarity=0.111  Sum_probs=90.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---------HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---------~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-  107 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++..         +....++...  ...+..+. .-+|   .++++ 
T Consensus        10 k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   85 (285)
T 3sc4_A           10 KTMFISGGSRGIGLAIAKRVAADGA--NVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVAAAVA   85 (285)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHH
Confidence            4789999999999999999999998  9999998752         1223333322  12333321 1122   22222 


Q ss_pred             ------CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecCCCCchhHHHHHHH
Q 018618          108 ------TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISNPVNSTVPIAAEVF  172 (353)
Q Consensus       108 ------~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tNPv~~~t~~~~~~~  172 (353)
                            ...|++|..||.....   ..+   ....+..|+.....+.+.+...-   ..+.||++|........      
T Consensus        86 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~------  159 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK------  159 (285)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC------
Confidence                  3899999999865321   222   23455678887777777766552   34677777765433210      


Q ss_pred             HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                           ++..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       160 -----~~~~~~Y~asKaal~~~~~~la~e~~--~~gI~vn~v  194 (285)
T 3sc4_A          160 -----WLRPTPYMMAKYGMTLCALGIAEELR--DAGIASNTL  194 (285)
T ss_dssp             -----GSCSHHHHHHHHHHHHHHHHHHHHTG--GGTCEEEEE
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhc--ccCcEEEEE
Confidence                 11122334433333456667777763  344544433

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=96.86  E-value=0.0044  Score=55.87  Aligned_cols=156  Identities=12%  Similarity=0.066  Sum_probs=84.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++++.+..  .....++... ....+..+.. -+|   .++++       .
T Consensus         8 k~vlVTGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            8 RHALITAGTKGLGKQVTEKLLAKGY--SVTVTYHSDTTAMETMKETYKD-VEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHTGG-GGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCchhHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999999999999998  8999987662  1122222111 1123333211 122   22333       3


Q ss_pred             CCcEEEEcCCC--CCC-C--CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCC-CCchhHHHHHHHHHh
Q 018618          109 GMDLVIIPAGV--PRK-P--GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNP-VNSTVPIAAEVFKKA  175 (353)
Q Consensus       109 ~ADiVIi~ag~--~~~-~--g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~  175 (353)
                      ..|++|..||.  ... +  ..+   ....+..|+.....+.+.+    ++. ..+.|+++|.. ..           ..
T Consensus        85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~g~iv~iss~~~~-----------~~  152 (264)
T 3i4f_A           85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQ-NFGRIINYGFQGAD-----------SA  152 (264)
T ss_dssp             CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTTGG-----------GC
T ss_pred             CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhc-CCCeEEEEeechhc-----------cc
Confidence            88999999983  211 1  122   2344566766555555554    544 34666666533 21           01


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+++..-.++.+......+-+.++..+.  +..|++..+
T Consensus       153 ~~~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v  189 (264)
T 3i4f_A          153 PGWIYRSAFAAAKVGLVSLTKTVAYEEA--EYGITANMV  189 (264)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHhh--hcCcEEEEE
Confidence            2333334455544444456667777753  334444333

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.85  E-value=0.0054  Score=56.53  Aligned_cols=34  Identities=18%  Similarity=0.128  Sum_probs=30.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEe-CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D-~~~   77 (353)
                      +++.|+||+|.+|..++..|++.|.  +|+++| ++.
T Consensus        10 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~~r~~   44 (291)
T 1e7w_A           10 PVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSA   44 (291)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--eEEEEcCCCH
Confidence            4788999999999999999999998  899999 765

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.84  E-value=0.0027  Score=57.93  Aligned_cols=156  Identities=15%  Similarity=0.120  Sum_probs=89.0

Q ss_pred             CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCc---hhhhh-------C
Q 018618           42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d---~~~al-------~  108 (353)
                      +++.|+||+  |.+|.+++..|++.|.  +|+++|++. ......++........... ..-+|   .++++       .
T Consensus         7 k~vlVTGas~~~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~-~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            7 KKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELNSPYVYE-LDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             CEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEE-CCTTCHHHHHHHHHHHHHHTS
T ss_pred             CEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEE-cCCCCHHHHHHHHHHHHHHcC
Confidence            479999998  8999999999999987  899999876 2223333322110111111 11122   22222       3


Q ss_pred             CCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRK-----P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-----~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..+|....     +  ..+   ....+..|+.....+.+.+..+- +.+.||++|.....            .+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~------------~~  151 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST------------KY  151 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT------------SB
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhc------------CC
Confidence            67999999986532     1  222   33456778888888887776553 23667776642211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+++.++  +..|++..+
T Consensus       152 ~~~~~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v  186 (275)
T 2pd4_A          152 MAHYNVMGLAKAALESAVRYLAVDLG--KHHIRVNAL  186 (275)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEE
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            23333344444444456667777763  344544433

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.84  E-value=0.0068  Score=55.04  Aligned_cols=114  Identities=16%  Similarity=0.165  Sum_probs=70.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|+++.  .....++.     ..+..+. .-+|   .++++       .
T Consensus         7 k~vlITGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            7 KTILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAALE-----AEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCC-----SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999998  9999998752  11111111     1222221 1122   22233       3


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVN  162 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~  162 (353)
                      ..|++|..+|.....   ..+   ....+..|+.....+++.+..+-. .+.||++|....
T Consensus        80 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~  140 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG  140 (263)
T ss_dssp             CCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence            569999999864321   122   234567788877777777665531 467777765443

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=96.83  E-value=0.0034  Score=56.96  Aligned_cols=149  Identities=17%  Similarity=0.127  Sum_probs=81.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------TGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~~A  110 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|++.|++....     ..    ..+..+. .-+|   .++++       ...
T Consensus        29 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~-----~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   97 (260)
T 3un1_A           29 KVVVITGASQGIGAGLVRAYRDRNY--RVVATSRSIKPS-----AD----PDIHTVAGDISKPETADRIVREGIERFGRI   97 (260)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSCCCC-----SS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChhhc-----cc----CceEEEEccCCCHHHHHHHHHHHHHHCCCC
Confidence            3789999999999999999999998  999999875210     00    1111111 1112   22222       389


Q ss_pred             cEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..||......   .+   ....+..|+.....+.+.+    .+. ..+.+++++......          ....++
T Consensus        98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~----------~~~~~~  166 (260)
T 3un1_A           98 DSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQ-GSGHIVSITTSLVDQ----------PMVGMP  166 (260)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCTTTTS----------CBTTCC
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEEechhhcc----------CCCCCc
Confidence            99999998653221   22   2344566766655555544    433 345666665422110          001112


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .-.++.+......+-+.+|..++  +..|++.++
T Consensus       167 ~~~Y~~sKaa~~~l~~~la~e~~--~~gI~vn~v  198 (260)
T 3un1_A          167 SALASLTKGGLNAVTRSLAMEFS--RSGVRVNAV  198 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTT--TTTEEEEEE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhC--cCCeEEEEE
Confidence            22333343344456677777773  444544443

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.83  E-value=0.0017  Score=57.35  Aligned_cols=70  Identities=17%  Similarity=0.223  Sum_probs=45.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhh-hhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LEN-ALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~-al~~ADiVIi~a  117 (353)
                      |||.|+|+ |.+|+.++..|...|+  +++++|.++..  +.++........+..  ..++   +++ .+++||+||++.
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~--~v~vid~~~~~--~~~l~~~~~~~~i~g--d~~~~~~l~~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKY--GVVIINKDREL--CEEFAKKLKATIIHG--DGSHKEILRDAEVSKNDVVVILT   73 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTC--CEEEEESCHHH--HHHHHHHSSSEEEES--CTTSHHHHHHHTCCTTCEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--eEEEEECCHHH--HHHHHHHcCCeEEEc--CCCCHHHHHhcCcccCCEEEEec
Confidence            79999998 9999999999999888  99999987622  122221110011111  1122   333 378999999985


Q ss_pred             C
Q 018618          118 G  118 (353)
Q Consensus       118 g  118 (353)
                      +
T Consensus        74 ~   74 (218)
T 3l4b_C           74 P   74 (218)
T ss_dssp             S
T ss_pred             C
Confidence            3

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.83  E-value=0.0064  Score=55.55  Aligned_cols=148  Identities=11%  Similarity=0.045  Sum_probs=83.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.... ...+..+. .-+|   .++++       
T Consensus        27 ~k~~lVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           27 DKVAFITGGGSGIGFRIAEIFMRHGC--HTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35899999999999999999999998  999999876  223333342211 12222221 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ...|++|..+|.....   ..+   ....+..|+.....+.+.+...   ...+.||++|.....          .  +.
T Consensus       104 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~----------~--~~  171 (277)
T 4fc7_A          104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGN----------R--GQ  171 (277)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHH----------H--TC
T ss_pred             CCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhC----------C--CC
Confidence            3789999999854321   122   2345667776666666554322   135667776642210          1  23


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhC
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      +..-.++.+......+-+.+|..++
T Consensus       172 ~~~~~Y~asKaa~~~l~~~la~e~~  196 (277)
T 4fc7_A          172 ALQVHAGSAKAAVDAMTRHLAVEWG  196 (277)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHhh
Confidence            3333344444444456677777763

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.82  E-value=0.0049  Score=57.98  Aligned_cols=34  Identities=18%  Similarity=0.128  Sum_probs=30.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEe-CCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYD-VVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D-~~~   77 (353)
                      +++.|+||+|.+|..++..|+..|.  +|+++| ++.
T Consensus        47 k~~lVTGas~GIG~aia~~La~~G~--~Vv~~~~r~~   81 (328)
T 2qhx_A           47 PVALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRSA   81 (328)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCCH
Confidence            4788999999999999999999997  899999 765

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.79  E-value=0.0027  Score=57.90  Aligned_cols=147  Identities=9%  Similarity=0.085  Sum_probs=82.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhh-------hhCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LEN-------ALTGM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~-------al~~A  110 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|+++...     ....  ..+..  .-+|   .++       .+...
T Consensus        14 ~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~-----~~~~--~~~~~--Dv~~~~~v~~~~~~~~~~~g~i   82 (269)
T 3vtz_A           14 DKVAIVTGGSSGIGLAVVDALVRYGA--KVVSVSLDEKSD-----VNVS--DHFKI--DVTNEEEVKEAVEKTTKKYGRI   82 (269)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCC--C-----TTSS--EEEEC--CTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCchhc-----cCce--eEEEe--cCCCHHHHHHHHHHHHHHcCCC
Confidence            45899999999999999999999998  899999876211     0000  00110  1112   122       23478


Q ss_pred             cEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..||......   .+   ....+..|+.....+++.    +.+. ..+.||++|......            +.+.
T Consensus        83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~~~------------~~~~  149 (269)
T 3vtz_A           83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAI-GHGSIINIASVQSYA------------ATKN  149 (269)
T ss_dssp             CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------BCTT
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCCEEEEECchhhcc------------CCCC
Confidence            99999998653221   22   233455676555444444    4433 346666665432111            1222


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .-.++.+......+-+.+|..++  + .|++..+
T Consensus       150 ~~~Y~asKaa~~~l~~~la~e~~--~-~i~vn~v  180 (269)
T 3vtz_A          150 AAAYVTSKHALLGLTRSVAIDYA--P-KIRCNAV  180 (269)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT--T-TEEEEEE
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhc--C-CCEEEEE
Confidence            33344444444556777888774  2 3544444

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.79  E-value=0.03  Score=51.17  Aligned_cols=156  Identities=14%  Similarity=0.079  Sum_probs=84.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c--HHHHHHHhcCCCCCeEEEEe-CCCc----h---hhh----
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGVTADISHMDTGAVVRGFL-GQPQ----L---ENA----  106 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~--~~~~~dl~~~~~~~~v~~~~-~t~d----~---~~a----  106 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++. .  .....++.... ...+..+. .-+|    .   +++    
T Consensus        24 k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           24 PAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4789999999999999999999987  899999876 2  22233332111 12222221 1122    1   122    


Q ss_pred             ---hCCCcEEEEcCCCCCCC--------C-----CC---HHHHHHHHHHHHHHHHHHHHhhC---C------CcEEEEec
Q 018618          107 ---LTGMDLVIIPAGVPRKP--------G-----MT---RDDLFNINAGIVRTLCEGIAKCC---P------NATVNLIS  158 (353)
Q Consensus       107 ---l~~ADiVIi~ag~~~~~--------g-----~~---r~~~~~~N~~i~~~i~~~i~~~~---p------~a~viv~t  158 (353)
                         +...|++|..||.....        .     .+   ....+..|+.....+++.+..+-   .      .+.||+++
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is  180 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC  180 (288)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred             HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence               23789999999864321        1     11   12345566655555555444332   1      46677776


Q ss_pred             CCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          159 NPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       159 NPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ......            +.+..-.++.+......+-+.+|..+.  +..|++.++
T Consensus       181 S~~~~~------------~~~~~~~Y~asKaa~~~l~~~la~e~~--~~gI~vn~v  222 (288)
T 2x9g_A          181 DAMVDQ------------PCMAFSLYNMGKHALVGLTQSAALELA--PYGIRVNGV  222 (288)
T ss_dssp             CTTTTS------------CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             cccccC------------CCCCCchHHHHHHHHHHHHHHHHHHhh--ccCeEEEEE
Confidence            533211            223333344444334456667777763  334444333

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.78  E-value=0.0045  Score=56.94  Aligned_cols=113  Identities=17%  Similarity=0.053  Sum_probs=72.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC---CCcEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQ---LENALT---GMDLV  113 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~---~ADiV  113 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|++.....  ++.... ...+..+.. -+|   .+++++   ..|++
T Consensus        16 gk~vlVTGas~gIG~~~a~~L~~~G~--~V~~~~r~~~~~~--~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~l   90 (291)
T 3rd5_A           16 QRTVVITGANSGLGAVTARELARRGA--TVIMAVRDTRKGE--AAARTM-AGQVEVRELDLQDLSSVRRFADGVSGADVL   90 (291)
T ss_dssp             TCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHH--HHHTTS-SSEEEEEECCTTCHHHHHHHHHTCCCEEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEECCHHHHH--HHHHHh-cCCeeEEEcCCCCHHHHHHHHHhcCCCCEE
Confidence            35899999999999999999999997  8999998752221  111111 233333321 123   223333   56999


Q ss_pred             EEcCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          114 IIPAGVPRKP----GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       114 Ii~ag~~~~~----g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      |..||.....    .......+..|+.....+.+.+...-.. .||++|.
T Consensus        91 v~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-riv~isS  139 (291)
T 3rd5_A           91 INNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-RVVTVSS  139 (291)
T ss_dssp             EECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-EEEEECC
T ss_pred             EECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-heeEeec
Confidence            9999864321    1223456788988888888888766433 4555554

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.77  E-value=0.002  Score=58.27  Aligned_cols=149  Identities=19%  Similarity=0.183  Sum_probs=81.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhh-------hCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENA-------LTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~a-------l~~ADiV  113 (353)
                      ++|.|+||+|.+|..++..|++.|.  +|++.|++...     +...   ..+.. .....+.+++       +...|++
T Consensus        22 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~-----~~~~---~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           22 RSVLVTGGNRGIGLAIARAFADAGD--KVAITYRSGEP-----PEGF---LAVKCDITDTEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSSCC-----CTTS---EEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHh-----hccc---eEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4799999999999999999999997  89999986511     0000   00100 0000112222       3356999


Q ss_pred             EEcCCCCCC------CCCCHHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          114 IIPAGVPRK------PGMTRDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       114 Ii~ag~~~~------~g~~r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      |..+|....      ...+....+..|+.....+++.    +++. ..+.||++|.-......-            ..-.
T Consensus        92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~~~~------------~~~~  158 (253)
T 2nm0_A           92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRA-KKGRVVLISSVVGLLGSA------------GQAN  158 (253)
T ss_dssp             EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCCCCCCCHH------------HHHH
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCEEEEECchhhCCCCC------------CcHH
Confidence            999986432      1123455667777665555554    4333 346677776544322100            0011


Q ss_pred             EeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          184 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ++.+......+-+.+++.++  +..|++.++.
T Consensus       159 Y~asK~a~~~~~~~la~e~~--~~gi~vn~v~  188 (253)
T 2nm0_A          159 YAASKAGLVGFARSLARELG--SRNITFNVVA  188 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC--SSSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhh--hcCeEEEEEE
Confidence            22333333445666777764  4455555544

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.76  E-value=0.014  Score=52.51  Aligned_cols=150  Identities=15%  Similarity=0.128  Sum_probs=82.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------~  108 (353)
                      +++.|+||+|.+|.+++..|++.|....|+++++++  ......++.     ..+..+. .-+|   .++++       .
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG-----DRFFYVVGDITEDSVLKQLVNAAVKGHG   77 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG-----GGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC-----CceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            368899999999999999998876433888888875  222222221     1222211 1122   22222       3


Q ss_pred             CCcEEEEcCCCCCC--C--CCCH---HHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRK--P--GMTR---DDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~--~--g~~r---~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..|++|..+|....  +  ..+.   ...+..|+.....+.+.    +++..  +.||++|......            +
T Consensus        78 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~------------~  143 (254)
T 3kzv_A           78 KIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNM------------Y  143 (254)
T ss_dssp             CCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCC------------S
T ss_pred             CccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhcc------------C
Confidence            78999999986322  1  2222   33455666555444444    45543  6677766543222            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+..-.++.+......+-+.+|..+    ..|++..+
T Consensus       144 ~~~~~~Y~asK~a~~~~~~~la~e~----~~i~vn~v  176 (254)
T 3kzv_A          144 FSSWGAYGSSKAALNHFAMTLANEE----RQVKAIAV  176 (254)
T ss_dssp             SCCSHHHHHHHHHHHHHHHHHHHHC----TTSEEEEE
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhhc----cCcEEEEE
Confidence            2333334444444445667777775    24554444

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.74  E-value=0.01  Score=54.08  Aligned_cols=143  Identities=10%  Similarity=0.098  Sum_probs=79.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh------CC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------TG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------~~  109 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.  ......++.     ..+..+. .-+|   .++++      ..
T Consensus        31 k~vlVTGas~GIG~aia~~l~~~G~--~Vi~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~  103 (281)
T 3ppi_A           31 ASAIVSGGAGGLGEATVRRLHADGL--GVVIADLAAEKGKALADELG-----NRAEFVSTNVTSEDSVLAAIEAANQLGR  103 (281)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            3789999999999999999999998  899999876  222233331     1222211 1122   22222      36


Q ss_pred             CcEEEEc-CCCCCCC--------CCC---HHHHHHHHHHHHHHHHHHH----Hhh-----CCCcEEEEecCCCCchhHHH
Q 018618          110 MDLVIIP-AGVPRKP--------GMT---RDDLFNINAGIVRTLCEGI----AKC-----CPNATVNLISNPVNSTVPIA  168 (353)
Q Consensus       110 ADiVIi~-ag~~~~~--------g~~---r~~~~~~N~~i~~~i~~~i----~~~-----~p~a~viv~tNPv~~~t~~~  168 (353)
                      .|++|+. +|.....        ..+   ....+..|+.....+.+.+    .+.     ...+.||+++......    
T Consensus       104 id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----  179 (281)
T 3ppi_A          104 LRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE----  179 (281)
T ss_dssp             EEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS----
T ss_pred             CCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC----
Confidence            7999998 5543211        122   2344556655554444443    321     2356777766533211    


Q ss_pred             HHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          169 AEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       169 ~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                              +.+..-.++.+......+-+.+++.+.
T Consensus       180 --------~~~~~~~Y~asKaa~~~~~~~la~e~~  206 (281)
T 3ppi_A          180 --------GQIGQTAYAAAKAGVIGLTIAAARDLS  206 (281)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             --------CCCCCcccHHHHHHHHHHHHHHHHHHh
Confidence                    233333444444444456677777763

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.74  E-value=0.0018  Score=57.29  Aligned_cols=138  Identities=14%  Similarity=0.083  Sum_probs=78.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhC------CCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALT------GMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~------~ADiVI  114 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|+++|++..      +...   ..+.. .....+++++++      +.|++|
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~--~V~~~~r~~~------~~~~---~~~~~D~~~~~~~~~~~~~~~~~~~~d~li   71 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGY--RVVVLDLRRE------GEDL---IYVEGDVTREEDVRRAVARAQEEAPLFAVV   71 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEESSCC------SSSS---EEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCC--EEEEEccCcc------ccce---EEEeCCCCCHHHHHHHHHHHHhhCCceEEE
Confidence            4899999999999999999999887  8999998752      0110   00000 000112333443      789999


Q ss_pred             EcCCCCCCCC------C----CHHHHHHHHHHHHHHHHHHHHhhC---------CCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          115 IPAGVPRKPG------M----TRDDLFNINAGIVRTLCEGIAKCC---------PNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       115 i~ag~~~~~g------~----~r~~~~~~N~~i~~~i~~~i~~~~---------p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      ..+|......      .    +..+.+..|+.....+.+.+....         +.+.+|++|....           . 
T Consensus        72 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~-----------~-  139 (242)
T 1uay_A           72 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA-----------F-  139 (242)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH-----------H-
T ss_pred             EcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh-----------c-
Confidence            9988643211      1    234456677776666666655432         1236666654211           0 


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHh
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      .+.++.-.++.+......+-+.+++.+
T Consensus       140 ~~~~~~~~Y~~sK~a~~~~~~~l~~e~  166 (242)
T 1uay_A          140 EGQIGQAAYAASKGGVVALTLPAAREL  166 (242)
T ss_dssp             HCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCchhhHHHHHHHHHHHHHHHHH
Confidence            123333344444433444556666665

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.69  E-value=0.0022  Score=56.53  Aligned_cols=143  Identities=16%  Similarity=0.174  Sum_probs=86.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++..    .|+.+..   .+      ...-+.+...|++|..+|...
T Consensus         7 k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~----~D~~~~~---~v------~~~~~~~g~id~lv~nAg~~~   71 (223)
T 3uce_A            7 TVYVVLGGTSGIGAELAKQLESEHT--IVHVASRQTG----LDISDEK---SV------YHYFETIGAFDHLIVTAGSYA   71 (223)
T ss_dssp             EEEEEETTTSHHHHHHHHHHCSTTE--EEEEESGGGT----CCTTCHH---HH------HHHHHHHCSEEEEEECCCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEecCCcc----cCCCCHH---HH------HHHHHHhCCCCEEEECCCCCC
Confidence            4788999999999999999999887  8999987642    2222210   00      011123457899999998642


Q ss_pred             CC----CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHH
Q 018618          122 KP----GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVR  193 (353)
Q Consensus       122 ~~----g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R  193 (353)
                      ..    ..+   ....+..|+.....+.+.+..+- +.+.|+++|.....            .+.+..-.++.+......
T Consensus        72 ~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~~~~~~~Y~asK~a~~~  139 (223)
T 3uce_A           72 PAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR------------KVVANTYVKAAINAAIEA  139 (223)
T ss_dssp             CCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT------------SCCTTCHHHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc------------cCCCCchHHHHHHHHHHH
Confidence            11    122   33456778888888888776553 34667766642211            123333334444444455


Q ss_pred             HHHHHHHHhCCCCCCCcceEEe
Q 018618          194 ANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +-+.+|+.++-    |++..+.
T Consensus       140 ~~~~la~e~~~----i~vn~v~  157 (223)
T 3uce_A          140 TTKVLAKELAP----IRVNAIS  157 (223)
T ss_dssp             HHHHHHHHHTT----SEEEEEE
T ss_pred             HHHHHHHhhcC----cEEEEEE
Confidence            67778888752    5544443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.68  E-value=0.014  Score=52.97  Aligned_cols=145  Identities=14%  Similarity=0.124  Sum_probs=79.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhh-------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLG-QPQ---LENAL-------  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al-------  107 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|++.+.+.   ......++...  ...+..+.. -+|   .++++       
T Consensus        27 k~vlITGas~gIG~a~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           27 PVVLVTGGSRGIGAAVCRLAARQGW--RVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            3789999999999999999999998  887774433   22233334332  123333211 122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHH----HHHhh--CCCcEEEEecCCCCchhHHHHHHHHH
Q 018618          108 TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCE----GIAKC--CPNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~----~i~~~--~p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                      ...|++|..||.....+    .+   ....+..|+.....+.+    .+.+.  ...+.||++|.....           
T Consensus       103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------  171 (272)
T 4e3z_A          103 GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAI-----------  171 (272)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHH-----------
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhc-----------
Confidence            37799999998654322    12   23445666655544444    44432  235667776653210           


Q ss_pred             hCCCC-CCceEeechhhHHHHHHHHHHHh
Q 018618          175 AGTYD-PKKLLGVTMLDVVRANTFVAEVL  202 (353)
Q Consensus       175 ~~~~~-~~kviG~t~ld~~R~~~~lA~~l  202 (353)
                      . +.+ ..-.++.+......+-+.+++.+
T Consensus       172 ~-~~~~~~~~Y~asKaa~~~~~~~la~e~  199 (272)
T 4e3z_A          172 L-GSATQYVDYAASKAAIDTFTIGLAREV  199 (272)
T ss_dssp             H-CCTTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             c-CCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence            1 112 11224444444445666777776

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.65  E-value=0.012  Score=52.85  Aligned_cols=108  Identities=15%  Similarity=0.160  Sum_probs=65.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC-CCchhh---hhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG-QPQLEN---ALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~-t~d~~~---al~~ADiVIi~  116 (353)
                      .++|.|+||+|.+|.+++..|++.|.  +|+++|+++  ....++.      .+..+.. ..+.++   .+.+.|++|..
T Consensus        19 ~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~--~~~~~~~------~~~~~~D~~~~~~~~~~~~~~iD~lv~~   88 (249)
T 1o5i_A           19 DKGVLVLAASRGIGRAVADVLSQEGA--EVTICARNE--ELLKRSG------HRYVVCDLRKDLDLLFEKVKEVDILVLN   88 (249)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCH--HHHHHTC------SEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEcCCH--HHHHhhC------CeEEEeeHHHHHHHHHHHhcCCCEEEEC
Confidence            35899999999999999999999997  899999875  1111221      1111100 123333   33489999999


Q ss_pred             CCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          117 AGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       117 ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +|.....   ..+   ....+..|+..    .+.+.+.+++.. .+.||++|.
T Consensus        89 Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS  140 (249)
T 1o5i_A           89 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITS  140 (249)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             CCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcc
Confidence            9865321   112   23344556544    445555665543 456666654

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.61  E-value=0.0042  Score=56.62  Aligned_cols=111  Identities=19%  Similarity=0.177  Sum_probs=65.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh-------
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQ---LENAL-------  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al-------  107 (353)
                      .+++.|+||+|.+|.+++..|++.|.  +|+++|+++.  .....++..      +..+. .-+|   .++++       
T Consensus         9 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            9 GKVVVVTGGGRGIGAGIVRAFVNSGA--RVVICDKDESGGRALEQELPG------AVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTT------EEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHhcC------CeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35799999999999999999999997  8999998752  222222211      11111 1122   22222       


Q ss_pred             CCCcEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHhhC--CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRKPG----MT---RDDLFNINAGIVRTLCEGIAKCC--PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i~~~i~~~i~~~~--p~a~viv~tN  159 (353)
                      ...|++|..+|.....+    .+   ....+..|+.....+++.+..+-  ..+.||++|.
T Consensus        81 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS  141 (270)
T 1yde_A           81 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS  141 (270)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcC
Confidence            37899999998643211    22   23455667665555555543221  1356666654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.55  E-value=0.0047  Score=56.61  Aligned_cols=150  Identities=20%  Similarity=0.168  Sum_probs=82.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEe-CCCch---hhh-------hC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFL-GQPQL---ENA-------LT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a-------l~  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++..  .....++     ...+..+. .-+|.   +++       +.
T Consensus         6 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            6 EVALITGGASGLGRALVDRFVAEGA--RVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4789999999999999999999998  9999998752  2111111     11222211 11222   122       34


Q ss_pred             CCcEEEEcCCCCCCCC-------C-C---HHHHHHHHHHHHHHHHH----HHHhhCCCcEEEEecCCCCchhHHHHHHHH
Q 018618          109 GMDLVIIPAGVPRKPG-------M-T---RDDLFNINAGIVRTLCE----GIAKCCPNATVNLISNPVNSTVPIAAEVFK  173 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g-------~-~---r~~~~~~N~~i~~~i~~----~i~~~~p~a~viv~tNPv~~~t~~~~~~~~  173 (353)
                      ..|++|..||.....+       . +   ....+..|+.....+.+    .+.+.  .+.+|+++.-...          
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~----------  146 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGF----------  146 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGT----------
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhc----------
Confidence            6799999998642111       1 1   22344566554444444    44433  3556655532211          


Q ss_pred             HhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          174 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       174 ~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                        .+.+..-.++.+......+-+.+|..++  +. |++..+-
T Consensus       147 --~~~~~~~~Y~asKaa~~~l~~~la~e~~--~~-Irvn~v~  183 (281)
T 3zv4_A          147 --YPNGGGPLYTATKHAVVGLVRQMAFELA--PH-VRVNGVA  183 (281)
T ss_dssp             --SSSSSCHHHHHHHHHHHHHHHHHHHHHT--TT-SEEEEEE
T ss_pred             --cCCCCCchhHHHHHHHHHHHHHHHHHhc--CC-CEEEEEE
Confidence              1122223344444444556778888875  33 6555443

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.53  E-value=0.0099  Score=53.85  Aligned_cols=73  Identities=18%  Similarity=0.262  Sum_probs=48.8

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-------------------cHHH--HHHHhcCCCCCeEEEEeCC-
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-------------------TPGV--TADISHMDTGAVVRGFLGQ-  100 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-------------------~~~~--~~dl~~~~~~~~v~~~~~t-  100 (353)
                      ||+|+|+ |.+|+.++..|+..|. .+|.++|.+.                   .+..  +..+........+..+... 
T Consensus        33 ~VlVvG~-Gg~G~~va~~La~~Gv-~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           33 RVLIVGL-GGLGCAASQYLASAGV-GNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTC-SEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             eEEEEee-CHHHHHHHHHHHHcCC-CeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            9999999 9999999999998886 4999999875                   1222  2233332222344443211 


Q ss_pred             --CchhhhhCCCcEEEEcC
Q 018618          101 --PQLENALTGMDLVIIPA  117 (353)
Q Consensus       101 --~d~~~al~~ADiVIi~a  117 (353)
                        .+.++.++++|+||.+.
T Consensus       111 ~~~~~~~~~~~~DvVi~~~  129 (249)
T 1jw9_B          111 DDAELAALIAEHDLVLDCT  129 (249)
T ss_dssp             CHHHHHHHHHTSSEEEECC
T ss_pred             CHhHHHHHHhCCCEEEEeC
Confidence              12345678999999974

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.53  E-value=0.0071  Score=57.51  Aligned_cols=93  Identities=16%  Similarity=0.223  Sum_probs=57.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|||. |.+|+.+|..+...|.  +|..+|++...       .    .....   ..++++.+++||+|++.....
T Consensus       171 gktiGIIGl-G~IG~~vA~~l~~~G~--~V~~~dr~~~~-------~----~~~~~---~~sl~ell~~aDvVil~vP~t  233 (340)
T 4dgs_A          171 GKRIGVLGL-GQIGRALASRAEAFGM--SVRYWNRSTLS-------G----VDWIA---HQSPVDLARDSDVLAVCVAAS  233 (340)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSCCT-------T----SCCEE---CSSHHHHHHTCSEEEECC---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEcCCccc-------c----cCcee---cCCHHHHHhcCCEEEEeCCCC
Confidence            469999999 9999999999988787  99999987522       0    01111   246789999999999974211


Q ss_pred             CCCCCCHHHHHHHHHHHH-HHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          121 RKPGMTRDDLFNINAGIV-RTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~-~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                        +         .+..++ .+   .+....|++++|+++  .++|.-
T Consensus       234 --~---------~t~~li~~~---~l~~mk~gailIN~aRG~vvde~  266 (340)
T 4dgs_A          234 --A---------ATQNIVDAS---LLQALGPEGIVVNVARGNVVDED  266 (340)
T ss_dssp             ------------------CHH---HHHHTTTTCEEEECSCC------
T ss_pred             --H---------HHHHHhhHH---HHhcCCCCCEEEECCCCcccCHH
Confidence              0         111111 22   233344789999986  445433

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.51  E-value=0.014  Score=52.08  Aligned_cols=146  Identities=16%  Similarity=0.115  Sum_probs=83.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch---hhhhC------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL---ENALT------  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~al~------  108 (353)
                      +++.|+||+|.+|.+++..|++.|.  .+++.+.+.   ......++....  ..+..+. .-+|.   +..++      
T Consensus         8 k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            8 KVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSNG--GSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCSHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhcC--CceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            4788999999999999999999997  887765433   233334444322  2322221 11222   11111      


Q ss_pred             -------CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHH
Q 018618          109 -------GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       109 -------~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                             ..|++|..+|......   .+   ....+..|+.....+.+.+..+- +.+.|+++|......          
T Consensus        84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~----------  153 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI----------  153 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS----------
T ss_pred             cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc----------
Confidence                   2899999998643211   22   23455678777777777766442 346777776533211          


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhC
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                        +.|..-.++.+......+-+.+++.+.
T Consensus       154 --~~~~~~~Y~asKaa~~~~~~~la~e~~  180 (255)
T 3icc_A          154 --SLPDFIAYSMTKGAINTMTFTLAKQLG  180 (255)
T ss_dssp             --CCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             --CCCCcchhHHhHHHHHHHHHHHHHHHH
Confidence              233333344444444456677777763

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.49  E-value=0.0017  Score=62.21  Aligned_cols=70  Identities=26%  Similarity=0.290  Sum_probs=45.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +|||.|+|| |+||+.++..|.+. .  +|.+.|++....  ..+.+..  ..+.. ......+.+.++++|+||.+.+
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~~-~--~v~~~~~~~~~~--~~~~~~~--~~~~~d~~d~~~l~~~~~~~DvVi~~~p   86 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKDE-F--DVYIGDVNNENL--EKVKEFA--TPLKVDASNFDKLVEVMKEFELVIGALP   86 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTT-S--EEEEEESCHHHH--HHHTTTS--EEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             ccEEEEECC-CHHHHHHHHHHhcC-C--CeEEEEcCHHHH--HHHhccC--CcEEEecCCHHHHHHHHhCCCEEEEecC
Confidence            579999999 99999999888654 3  899999875211  1122211  11221 0111345567899999999864

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.48  E-value=0.0032  Score=59.70  Aligned_cols=65  Identities=25%  Similarity=0.354  Sum_probs=48.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..++|+|||. |.+|..+|..+...|.  +|+.+|++.......++   .    +..    .++++++++||+|+++..
T Consensus       149 ~g~~vgIIG~-G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~~~~---g----~~~----~~l~~~l~~aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGL-GRIGQAIAKRAKGFNM--RILYYSRTRKEEVEREL---N----AEF----KPLEDLLRESDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHH---C----CEE----CCHHHHHHHCSEEEECCC
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCC--EEEEECCCcchhhHhhc---C----ccc----CCHHHHHhhCCEEEECCC
Confidence            3579999999 9999999999998887  99999987643222211   1    121    256788999999999864

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.46  E-value=0.021  Score=53.51  Aligned_cols=155  Identities=12%  Similarity=0.135  Sum_probs=85.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC---------C--cHHHHHHHhcCCCCCeEE-EEeCCCchhh----
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV---------N--TPGVTADISHMDTGAVVR-GFLGQPQLEN----  105 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~---------~--~~~~~~dl~~~~~~~~v~-~~~~t~d~~~----  105 (353)
                      +++.|+||+|.+|..++..|+..|.  +|++.|..         .  ....+.++....  .... ......+.++    
T Consensus        10 k~~lVTGas~GIG~~~a~~La~~Ga--~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~--~~~~~D~~~~~~~~~~~~~   85 (319)
T 1gz6_A           10 RVVLVTGAGGGLGRAYALAFAERGA--LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GKAVANYDSVEAGEKLVKT   85 (319)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CEEEEECCCGGGHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEcCCcccccccCCHHHHHHHHHHHHhhC--CeEEEeCCCHHHHHHHHHH
Confidence            4789999999999999999999997  89998863         2  222233443321  1111 1111112212    


Q ss_pred             ---hhCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHH
Q 018618          106 ---ALTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVF  172 (353)
Q Consensus       106 ---al~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~  172 (353)
                         .+...|++|..+|.....   ..+   ....+..|+.....+.+.    +++. ..+.||++|....          
T Consensus        86 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~grIV~vsS~~~----------  154 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQ-NYGRIIMTASASG----------  154 (319)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEECCHHH----------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEECChhh----------
Confidence               234789999999865432   122   233456676665444444    4443 3466666654211          


Q ss_pred             HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                       .. +.+..-.++.+......+-+.+++.+.  +..|++..+.
T Consensus       155 -~~-~~~~~~~Y~aSK~a~~~~~~~la~el~--~~gI~vn~v~  193 (319)
T 1gz6_A          155 -IY-GNFGQANYSAAKLGLLGLANTLVIEGR--KNNIHCNTIA  193 (319)
T ss_dssp             -HH-CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEEE
T ss_pred             -cc-CCCCCHHHHHHHHHHHHHHHHHHHHhc--ccCEEEEEEe
Confidence             11 223333455554445556677777753  3445544443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=96.45  E-value=0.015  Score=52.74  Aligned_cols=151  Identities=16%  Similarity=0.141  Sum_probs=85.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL----------ENALTGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~~A  110 (353)
                      ++|.|+||++-+|..++..|++.|.  +|++.|+++..  ..++....  .....+. .-+|.          .+.+..-
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga--~V~~~~~~~~~--~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i   76 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD--KVCFIDIDEKR--SADFAKER--PNLFYFHGDVADPLTLKKFVEYAMEKLQRI   76 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHHTTC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC--EEEEEeCCHHH--HHHHHHhc--CCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            3788999999999999999999998  99999997521  12233221  1222111 11221          2345688


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHHHHHH----HHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRKP---GMT---RDDLFNINAGIVR----TLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~----~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..||.....   ..+   ....+..|+....    ...+.+.+.  .+.+|+++.-...            .+.|.
T Consensus        77 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~------------~~~~~  142 (247)
T 3ged_A           77 DVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAF------------QSEPD  142 (247)
T ss_dssp             CEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGT------------SCCTT
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccc------------cCCCC
Confidence            9999999865322   222   3334556655444    444455433  4666776542211            12222


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .-.++.+.-....|-+.+|..++  | .|++-.+.
T Consensus       143 ~~~Y~asKaal~~ltk~lA~ela--~-~IrVN~I~  174 (247)
T 3ged_A          143 SEAYASAKGGIVALTHALAMSLG--P-DVLVNCIA  174 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT--T-TSEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHC--C-CCEEEEEe
Confidence            22233333334456788888886  4 56554443

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.45  E-value=0.093  Score=47.47  Aligned_cols=113  Identities=16%  Similarity=0.232  Sum_probs=68.5

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhh--hCCCcEEEEc
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENA--LTGMDLVIIP  116 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a--l~~ADiVIi~  116 (353)
                      .+.|+||++-+|..++..|++.|.  .|++.|++..+..+..+....  .....+. .-+|   .++.  .-.-|++|..
T Consensus        11 valVTGas~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN   86 (247)
T 4hp8_A           11 KALVTGANTGLGQAIAVGLAAAGA--EVVCAARRAPDETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDILVNN   86 (247)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred             EEEEeCcCCHHHHHHHHHHHHcCC--EEEEEeCCcHHHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            566779999999999999999998  999999976433333343322  1222111 1122   1111  2347999999


Q ss_pred             CCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecC
Q 018618          117 AGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       117 ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ||.....   ..+   ....+..|+..    .+..++.+.+....+.||+++.
T Consensus        87 AGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS  139 (247)
T 4hp8_A           87 AGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIAS  139 (247)
T ss_dssp             CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEec
Confidence            9865322   122   33445666554    4455556666666677887764

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=96.45  E-value=0.002  Score=61.13  Aligned_cols=61  Identities=16%  Similarity=0.284  Sum_probs=46.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..+||+|||. |.+|+.+|..+...|.  +|..+|++....      .   .  ...   ..++++.+++||+|++..
T Consensus       163 ~g~~vgIIG~-G~iG~~vA~~l~~~G~--~V~~~dr~~~~~------~---g--~~~---~~~l~ell~~aDvVil~v  223 (333)
T 3ba1_A          163 SGKRVGIIGL-GRIGLAVAERAEAFDC--PISYFSRSKKPN------T---N--YTY---YGSVVELASNSDILVVAC  223 (333)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTC--CEEEECSSCCTT------C---C--SEE---ESCHHHHHHTCSEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCCchhc------c---C--cee---cCCHHHHHhcCCEEEEec
Confidence            3468999999 9999999999998887  899999875211      0   1  111   146778899999999985

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=95.43  E-value=0.0005  Score=60.49  Aligned_cols=63  Identities=14%  Similarity=0.142  Sum_probs=44.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .|||+|||+ |.+|+.++..|...|.  +|.++|+++.   ...+...    .+..   . +.+++++++|+||++.
T Consensus        19 ~~~I~iIG~-G~mG~~la~~L~~~G~--~V~~~~r~~~---~~~~~~~----g~~~---~-~~~~~~~~aDvVilav   81 (201)
T 2yjz_A           19 QGVVCIFGT-GDFGKSLGLKMLQCGY--SVVFGSRNPQ---VSSLLPR----GAEV---L-CYSEAASRSDVIVLAV   81 (201)
Confidence            368999998 9999999999988886  8889997642   1112111    1111   1 4457789999999985

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=96.42  E-value=0.0009  Score=61.50  Aligned_cols=63  Identities=11%  Similarity=0.158  Sum_probs=36.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEE-EEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVL-HLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el-~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||+ |.+|..++..|... +  +| .++|+++...  ..+... ...   .   .++++++++++|+||++.
T Consensus         3 m~I~iIG~-G~mG~~la~~l~~~-~--~v~~v~~~~~~~~--~~~~~~-~g~---~---~~~~~~~~~~~DvVilav   66 (276)
T 2i76_A            3 LVLNFVGT-GTLTRFFLECLKDR-Y--EIGYILSRSIDRA--RNLAEV-YGG---K---AATLEKHPELNGVVFVIV   66 (276)
T ss_dssp             -CCEEESC-CHHHHHHHHTTC-------CCCEECSSHHHH--HHHHHH-TCC---C---CCSSCCCCC---CEEECS
T ss_pred             ceEEEEeC-CHHHHHHHHHHHHc-C--cEEEEEeCCHHHH--HHHHHH-cCC---c---cCCHHHHHhcCCEEEEeC
Confidence            69999998 99999999888766 4  77 4899865221  122111 011   1   235556788999999985

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.38  E-value=0.065  Score=48.63  Aligned_cols=157  Identities=15%  Similarity=0.172  Sum_probs=86.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---------HHHHHHHhcCCCCCeEEEEe-CCCch---hhh--
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---------PGVTADISHMDTGAVVRGFL-GQPQL---ENA--  106 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---------~~~~~dl~~~~~~~~v~~~~-~t~d~---~~a--  106 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++..         .....++...  ...+..+. .-+|.   ++.  
T Consensus         7 k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            7 KTLFITGASRGIGLAIALRAARDGA--NVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHHHHH
T ss_pred             cEEEEECCCChHHHHHHHHHHHCCC--EEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHH
Confidence            4789999999999999999999997  8999998751         1222233221  12333221 11222   122  


Q ss_pred             -----hCCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHH
Q 018618          107 -----LTGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVF  172 (353)
Q Consensus       107 -----l~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~  172 (353)
                           +...|++|..+|......   .+   ....+..|+.....+.+.+..+   .+.+.||+++.........     
T Consensus        83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-----  157 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW-----  157 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH-----
T ss_pred             HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-----
Confidence                 247899999998653221   22   2334566766555555554332   2456777777655443210     


Q ss_pred             HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                           ++..-.++.+......+-+.+|+.++  +..|++..+
T Consensus       158 -----~~~~~~Y~asKaal~~l~~~la~e~~--~~gI~vn~v  192 (274)
T 3e03_A          158 -----WGAHTGYTLAKMGMSLVTLGLAAEFG--PQGVAINAL  192 (274)
T ss_dssp             -----HHHCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHhh--hcCEEEEEE
Confidence                 00111233443334456677777763  334544433

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=96.35  E-value=0.016  Score=57.76  Aligned_cols=117  Identities=18%  Similarity=0.134  Sum_probs=74.2

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-----HHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-----PGVTADISHMDTGAVVRGFLG-QPQ---LENALT  108 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-----~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~  108 (353)
                      +.+..+|.|+||+|.+|..++..|+..|. ..|++++++..     .....++...  ...+..+.. -+|   .+++++
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~-~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~  299 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGA-PHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLG  299 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTC-SEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCC-CEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHH
Confidence            44567899999999999999999998876 25899998651     2233344432  234443321 123   334455


Q ss_pred             CC------cEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          109 GM------DLVIIPAGVPRKP---GMTR---DDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       109 ~A------DiVIi~ag~~~~~---g~~r---~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..      |.||+++|.....   .++.   ...+..|+.....+.+.+.+... ..++++|
T Consensus       300 ~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~V~~S  360 (486)
T 2fr1_A          300 GIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDL-TAFVLFS  360 (486)
T ss_dssp             TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCC-SEEEEEE
T ss_pred             HHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCC-CEEEEEc
Confidence            54      9999999875422   1232   23456788888888888876533 4455444

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=96.35  E-value=0.0027  Score=56.81  Aligned_cols=147  Identities=13%  Similarity=0.123  Sum_probs=84.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEe-CCC---chhhhhC-----C
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFL-GQP---QLENALT-----G  109 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~-~t~---d~~~al~-----~  109 (353)
                      .+++.|+||+|.+|.+++..|++ .+.  .|++.|+++. ...           .+..+. .-+   +.+++++     .
T Consensus         4 ~k~vlITGas~gIG~~~a~~l~~~~g~--~v~~~~~~~~~~~~-----------~~~~~~~Dv~~~~~v~~~~~~~~~~~   70 (244)
T 4e4y_A            4 MANYLVTGGSKGIGKAVVELLLQNKNH--TVINIDIQQSFSAE-----------NLKFIKADLTKQQDITNVLDIIKNVS   70 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTSTTE--EEEEEESSCCCCCT-----------TEEEEECCTTCHHHHHHHHHHTTTCC
T ss_pred             CCeEEEeCCCChHHHHHHHHHHhcCCc--EEEEeccccccccc-----------cceEEecCcCCHHHHHHHHHHHHhCC
Confidence            34789999999999999999988 566  8889998652 110           011110 001   2222222     7


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618          110 MDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  182 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k  182 (353)
                      .|++|..||.....   ..+   ....+..|+.....+++.+..+- +.+.||+++.....            .+.|..-
T Consensus        71 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~------------~~~~~~~  138 (244)
T 4e4y_A           71 FDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCF------------IAKPNSF  138 (244)
T ss_dssp             EEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGT------------CCCTTBH
T ss_pred             CCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHc------------cCCCCCc
Confidence            89999999864321   222   33456788888888888776553 23566666543211            1223323


Q ss_pred             eEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          183 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       183 viG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .++.+......+-+.+++.++  +..|++..+
T Consensus       139 ~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v  168 (244)
T 4e4y_A          139 AYTLSKGAIAQMTKSLALDLA--KYQIRVNTV  168 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHH--HcCeEEEEE
Confidence            344444444556677777663  334544433

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=96.34  E-value=0.008  Score=55.37  Aligned_cols=79  Identities=15%  Similarity=0.158  Sum_probs=51.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEE-EEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVR-GFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~-~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +.+++.|+||+|.+|.+++..|+..|.  +|+++|++.  ....+.++........+. ......+.+++++++|+||.+
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~--~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~  195 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGA--EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTA  195 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEEC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEEC
Confidence            346899999779999999999999987  799999875  233333342210001111 111112345678899999999


Q ss_pred             CCCC
Q 018618          117 AGVP  120 (353)
Q Consensus       117 ag~~  120 (353)
                      +|..
T Consensus       196 ag~g  199 (287)
T 1lu9_A          196 GAIG  199 (287)
T ss_dssp             CCTT
T ss_pred             CCcc
Confidence            8753

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.33  E-value=0.0051  Score=58.75  Aligned_cols=98  Identities=21%  Similarity=0.276  Sum_probs=64.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..++|+|||. |.+|+.+|..+..-|.  +|+.+|.+. ....+.++.       +..   ..++++.++.||+|++...
T Consensus       163 ~gktvGIIG~-G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~~~~~g-------~~~---~~~l~ell~~aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGA-GRIGKLLLQRLKPFGC--NLLYHDRLQMAPELEKETG-------AKF---VEDLNEMLPKCDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCC--EEEEECSSCCCHHHHHHHC-------CEE---CSCHHHHGGGCSEEEECSC
T ss_pred             cCCEEeEEEe-CHHHHHHHHHHHHCCC--EEEEeCCCccCHHHHHhCC-------CeE---cCCHHHHHhcCCEEEECCC
Confidence            4579999999 9999999999988787  899999875 222222221       111   2467899999999999853


Q ss_pred             C-CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          119 V-PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       119 ~-~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                      . +...++-       |    .+.   +....|++++|+++  .++|.-
T Consensus       230 lt~~t~~li-------~----~~~---l~~mk~gailIN~aRG~~vde~  264 (351)
T 3jtm_A          230 LTEKTRGMF-------N----KEL---IGKLKKGVLIVNNARGAIMERQ  264 (351)
T ss_dssp             CCTTTTTCB-------S----HHH---HHHSCTTEEEEECSCGGGBCHH
T ss_pred             CCHHHHHhh-------c----HHH---HhcCCCCCEEEECcCchhhCHH
Confidence            2 1111211       1    122   23334789999987  455544

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.32  E-value=0.0023  Score=58.37  Aligned_cols=153  Identities=17%  Similarity=0.191  Sum_probs=82.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHh-cCCCC--CeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADIS-HMDTG--AVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~-~~~~~--~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|++.|++...... +.. .++..  ..+...  -....+.+...|++|..||
T Consensus        29 k~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~-~~~~~~Dv~~~~~~~~~--~~~~~~~~g~iD~lvnnAg  103 (266)
T 3uxy_A           29 KVALVTGAAGGIGGAVVTALRAAGA--RVAVADRAVAGIAA-DLHLPGDLREAAYADGL--PGAVAAGLGRLDIVVNNAG  103 (266)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEECSSCCTTSCC-SEECCCCTTSHHHHHHH--HHHHHHHHSCCCEEEECCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHh-hhccCcCCCCHHHHHHH--HHHHHHhcCCCCEEEECCC
Confidence            4788999999999999999999998  89999987511000 000 00000  000000  0011233458999999998


Q ss_pred             CCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeech
Q 018618          119 VPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTM  188 (353)
Q Consensus       119 ~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~  188 (353)
                      .....   ..+   ....+..|+.....+++.+    ++. ..+.||++|......            +.+..-.++.+.
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-~~g~iv~isS~~~~~------------~~~~~~~Y~asK  170 (266)
T 3uxy_A          104 VISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAA-GGGAIVNVASCWGLR------------PGPGHALYCLTK  170 (266)
T ss_dssp             CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTB------------CCTTBHHHHHHH
T ss_pred             CCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEECCHHhCC------------CCCCChHHHHHH
Confidence            65321   122   2334566766555555554    443 356677766543221            223223344444


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          189 LDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .....+-+.+|..++  +..|++..+
T Consensus       171 aa~~~l~~~la~e~~--~~gI~vn~v  194 (266)
T 3uxy_A          171 AALASLTQCMGMDHA--PQGIRINAV  194 (266)
T ss_dssp             HHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHhh--hcCcEEEEE
Confidence            444456677777763  334444333

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.30  E-value=0.042  Score=49.97  Aligned_cols=155  Identities=14%  Similarity=0.163  Sum_probs=89.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      +.+.|+||++-+|..++..|++.|.  .|+++|+++  ++..+.++....  .+...+. .-+|.          .+.+-
T Consensus         8 KvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            8 KVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGMG--KEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3677889999999999999999998  899999987  344455555432  2222211 11221          23346


Q ss_pred             CCcEEEEcCCCCC--CC--CCC---HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPR--KP--GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~--~~--g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .-|++|..||...  .+  ..+   ....+..|+    ...+..++.+.+.. .+.||+++.-....            +
T Consensus        84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~------------~  150 (254)
T 4fn4_A           84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIR------------G  150 (254)
T ss_dssp             CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC------------S
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcC------------C
Confidence            7899999998532  22  123   233455565    44556666666554 56777765422111            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+.-....|-+.+|..++  +..|++-.+-
T Consensus       151 ~~~~~~Y~asKaal~~ltr~lA~ela--~~gIrVN~V~  186 (254)
T 4fn4_A          151 GFAGAPYTVAKHGLIGLTRSIAAHYG--DQGIRAVAVL  186 (254)
T ss_dssp             SSSCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhh--hhCeEEEEEE
Confidence            22222233333333456677887774  5556544443

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.30  E-value=0.049  Score=49.53  Aligned_cols=155  Identities=11%  Similarity=0.130  Sum_probs=89.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---h-------hhhhCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENALTG  109 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~-------~~al~~  109 (353)
                      .+.|+||++-+|..++..|++.|.  .|++.|+++  +...+.++....  .+...+. .-+|   .       .+.+-.
T Consensus        11 valVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D           11 TALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRKG--YDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHTT--CCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            567779999999999999999998  999999986  333444554432  1222211 0112   1       123457


Q ss_pred             CcEEEEcCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          110 MDLVIIPAGVPRKPG---MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       110 ADiVIi~ag~~~~~g---~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      -|++|..||......   .+   ....+..|+.    ..+..++.+.+....+.||+++.-....            +.|
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~------------~~~  154 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA------------ARP  154 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------BCT
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC------------CCC
Confidence            899999998653221   22   3334556654    4455666666555667888876432211            122


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ..-.++.+.-....+-+.+|..++  +..|++-.+-
T Consensus       155 ~~~~Y~asKaal~~ltr~lA~ela--~~gIrVN~V~  188 (255)
T 4g81_D          155 TVAPYTAAKGGIKMLTCSMAAEWA--QFNIQTNAIG  188 (255)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEe
Confidence            222233333333456677888874  5555544443

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.28  E-value=0.056  Score=48.00  Aligned_cols=149  Identities=13%  Similarity=0.119  Sum_probs=74.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----------CchhhhhCCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----------PQLENALTGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----------~d~~~al~~AD  111 (353)
                      +++.|+||+|.+|.+++..|++ +.  .|+++|.+....  .++.+.   ..+..+...          .+..+.+...|
T Consensus         6 k~vlITGas~gIG~~~a~~l~~-g~--~v~~~~r~~~~~--~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~id   77 (245)
T 3e9n_A            6 KIAVVTGATGGMGIEIVKDLSR-DH--IVYALGRNPEHL--AALAEI---EGVEPIESDIVKEVLEEGGVDKLKNLDHVD   77 (245)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTT-TS--EEEEEESCHHHH--HHHHTS---TTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred             CEEEEEcCCCHHHHHHHHHHhC-CC--eEEEEeCCHHHH--HHHHhh---cCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence            4789999999999999999987 55  899999865211  122221   111211100          01112234789


Q ss_pred             EEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCC
Q 018618          112 LVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       112 iVIi~ag~~~~~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      ++|..+|......   .+   ....+..|+..    .+.+.+.+++..  +.+|+++......            +.+..
T Consensus        78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~------------~~~~~  143 (245)
T 3e9n_A           78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNG------------PHPGN  143 (245)
T ss_dssp             EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC----------------------C
T ss_pred             EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCccccc------------CCCCc
Confidence            9999998653221   11   22345556555    455555555443  5666665433211            12333


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      -.++.+......+-+.+++.++  +..|++..+
T Consensus       144 ~~Y~asK~a~~~~~~~la~e~~--~~gi~v~~v  174 (245)
T 3e9n_A          144 TIYAASKHALRGLADAFRKEEA--NNGIRVSTV  174 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhh--hcCeEEEEE
Confidence            3455554444556677777764  334544433

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.28  E-value=0.006  Score=58.18  Aligned_cols=65  Identities=20%  Similarity=0.224  Sum_probs=47.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHH-hCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMK-INPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~-~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||. |.+|+.++..+. ..|.  +|+.+|++. ......++.       +..   .+++++.+++||+|++..
T Consensus       162 ~g~~vgIIG~-G~IG~~vA~~l~~~~G~--~V~~~d~~~~~~~~~~~~g-------~~~---~~~l~ell~~aDvVil~v  228 (348)
T 2w2k_A          162 RGHVLGAVGL-GAIQKEIARKAVHGLGM--KLVYYDVAPADAETEKALG-------AER---VDSLEELARRSDCVSVSV  228 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCC--EEEEECSSCCCHHHHHHHT-------CEE---CSSHHHHHHHCSEEEECC
T ss_pred             CCCEEEEEEE-CHHHHHHHHHHHHhcCC--EEEEECCCCcchhhHhhcC-------cEE---eCCHHHHhccCCEEEEeC
Confidence            3469999999 999999999998 7787  999999876 222222111       121   135778899999999985

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.26  E-value=0.0037  Score=56.37  Aligned_cols=112  Identities=15%  Similarity=0.097  Sum_probs=67.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCc---hhhhh------CCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQ---LENAL------TGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d---~~~al------~~AD  111 (353)
                      +.+.|+||+|.+|.+++..|++.|.  +|+++|.+. .....++.     ..+..+. .-+|   .++++      ...|
T Consensus        10 k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~-~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~g~id   81 (257)
T 3tl3_A           10 AVAVVTGGASGLGLATTKRLLDAGA--QVVVLDIRG-EDVVADLG-----DRARFAAADVTDEAAVASALDLAETMGTLR   81 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC--EEEEEESSC-HHHHHHTC-----TTEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCch-HHHHHhcC-----CceEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999998  899999854 22222221     1222211 1122   22223      3899


Q ss_pred             EEEEcCCCCCC-------CCCC---HHHHHHHHHHHHHHHHHHHHhh-----------CCCcEEEEecCCC
Q 018618          112 LVIIPAGVPRK-------PGMT---RDDLFNINAGIVRTLCEGIAKC-----------CPNATVNLISNPV  161 (353)
Q Consensus       112 iVIi~ag~~~~-------~g~~---r~~~~~~N~~i~~~i~~~i~~~-----------~p~a~viv~tNPv  161 (353)
                      ++|..+|....       ...+   ....+..|+.....+.+.+..+           ...+.||++|...
T Consensus        82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  152 (257)
T 3tl3_A           82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVA  152 (257)
T ss_dssp             EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC
T ss_pred             EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchh
Confidence            99999985321       0122   3345667776655555554433           2356777776544

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.22  E-value=0.0076  Score=54.69  Aligned_cols=113  Identities=14%  Similarity=0.100  Sum_probs=68.5

Q ss_pred             CeEEEEcC--CCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEE-eCCCc---hhhhhC-------
Q 018618           42 FKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGF-LGQPQ---LENALT-------  108 (353)
Q Consensus        42 ~KI~IiGa--~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~-~~t~d---~~~al~-------  108 (353)
                      +++.|+||  +|.+|.+++..|++.|.  +|++.|++.... ..++.+.. ...+..+ ..-+|   .+++++       
T Consensus         8 k~vlVTGa~~s~gIG~aia~~l~~~G~--~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            8 KRILVSGIITDSSIAFHIARVAQEQGA--QLVLTGFDRLRL-IQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             CEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEEECSCHHH-HHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEECCCCCCchHHHHHHHHHHCCC--EEEEEecChHHH-HHHHHHhc-CCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47899998  89999999999999997  899999876221 11222211 1111111 11122   223333       


Q ss_pred             ---CCcEEEEcCCCCCC------C--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618          109 ---GMDLVIIPAGVPRK------P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       109 ---~ADiVIi~ag~~~~------~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                         ..|++|..+|....      +  ..+   ....+..|+.....+++.+..+- +.+.||++|
T Consensus        84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is  148 (269)
T 2h7i_A           84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD  148 (269)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence               78999999986531      1  122   23456678887777777776543 345666665

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=96.22  E-value=0.015  Score=57.02  Aligned_cols=91  Identities=15%  Similarity=0.120  Sum_probs=62.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHH-HHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGV-TADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~-~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..++|+|+|. |.+|..+|..|...|.  +|+.+|+++.... +.  .. .  .  ..    .++++++++||+|+.+.+
T Consensus       210 ~GktVgIiG~-G~IG~~vA~~Lka~Ga--~Viv~D~~p~~a~~A~--~~-G--~--~~----~sL~eal~~ADVVilt~g  275 (436)
T 3h9u_A          210 AGKTACVCGY-GDVGKGCAAALRGFGA--RVVVTEVDPINALQAA--ME-G--Y--QV----LLVEDVVEEAHIFVTTTG  275 (436)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH--HT-T--C--EE----CCHHHHTTTCSEEEECSS
T ss_pred             cCCEEEEEee-CHHHHHHHHHHHHCCC--EEEEECCChhhhHHHH--Hh-C--C--ee----cCHHHHHhhCCEEEECCC
Confidence            3569999999 9999999999998887  8999999762221 11  11 1  1  11    257899999999998754


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      ....-+.                 +.+....|+++|++++++.
T Consensus       276 t~~iI~~-----------------e~l~~MK~gAIVINvgRg~  301 (436)
T 3h9u_A          276 NDDIITS-----------------EHFPRMRDDAIVCNIGHFD  301 (436)
T ss_dssp             CSCSBCT-----------------TTGGGCCTTEEEEECSSSG
T ss_pred             CcCccCH-----------------HHHhhcCCCcEEEEeCCCC
Confidence            3321111                 1233345789999998764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.21  E-value=0.034  Score=49.62  Aligned_cols=71  Identities=10%  Similarity=0.065  Sum_probs=48.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      ++|.|||+ |.+|...+..|+..|.  +|.++|.+.... ..++...   ..+.......+ ++.+.++|+||.+.+.+
T Consensus        32 k~VLVVGg-G~va~~ka~~Ll~~GA--~VtVvap~~~~~-l~~l~~~---~~i~~i~~~~~-~~dL~~adLVIaAT~d~  102 (223)
T 3dfz_A           32 RSVLVVGG-GTIATRRIKGFLQEGA--AITVVAPTVSAE-INEWEAK---GQLRVKRKKVG-EEDLLNVFFIVVATNDQ  102 (223)
T ss_dssp             CCEEEECC-SHHHHHHHHHHGGGCC--CEEEECSSCCHH-HHHHHHT---TSCEEECSCCC-GGGSSSCSEEEECCCCT
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--EEEEECCCCCHH-HHHHHHc---CCcEEEECCCC-HhHhCCCCEEEECCCCH
Confidence            48999999 9999999999998887  899999764322 2334332   12233222333 36689999999876543

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.13  E-value=0.0044  Score=58.58  Aligned_cols=66  Identities=18%  Similarity=0.203  Sum_probs=47.7

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+||+|||. |.+|+.++..+...|.  +|+.+|++......  ....    .+..   . ++++.+++||+|+++..
T Consensus       154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~--~V~~~d~~~~~~~~--~~~~----g~~~---~-~l~e~l~~aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGL-GRIGQAIARRLKPFGV--QRFLYTGRQPRPEE--AAEF----QAEF---V-STPELAAQSDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTC--CEEEEESSSCCHHH--HHTT----TCEE---C-CHHHHHHHCSEEEECCC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcchhH--HHhc----Ccee---C-CHHHHHhhCCEEEEeCC
Confidence            3569999999 9999999999988887  89999987521111  1211    1221   2 56788999999999864

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=96.11  E-value=0.011  Score=53.22  Aligned_cols=33  Identities=12%  Similarity=0.154  Sum_probs=30.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV   75 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~   75 (353)
                      +.|||+|||+ |.+|.+++..|...|+  +|+.+|.
T Consensus         5 ~~mkI~IIG~-G~~G~sLA~~L~~~G~--~V~~~~~   37 (232)
T 3dfu_A            5 PRLRVGIFDD-GSSTVNMAEKLDSVGH--YVTVLHA   37 (232)
T ss_dssp             CCCEEEEECC-SCCCSCHHHHHHHTTC--EEEECSS
T ss_pred             CCcEEEEEee-CHHHHHHHHHHHHCCC--EEEEecC
Confidence            3589999999 9999999999999998  8999986

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.09  E-value=0.0099  Score=54.75  Aligned_cols=152  Identities=16%  Similarity=0.171  Sum_probs=79.1

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEE-EeCCCcHHHHHHHhcCC-CCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHL-YDVVNTPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L-~D~~~~~~~~~dl~~~~-~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .+++||+|+||+|.+|+.++..+.+.+-. +|+- +|.+.....-.|+.... ....+.   .++|+++.++++|+||..
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~-eLv~~~d~~~~~~~G~d~gel~g~~~gv~---v~~dl~~ll~~~DVVIDf   80 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDA-TLVGALDRTGSPQLGQDAGAFLGKQTGVA---LTDDIERVCAEADYLIDF   80 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTE-EEEEEBCCTTCTTTTSBTTTTTTCCCSCB---CBCCHHHHHHHCSEEEEC
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEEecCcccccccHHHHhCCCCCce---ecCCHHHHhcCCCEEEEc
Confidence            34689999998899999999888876533 5554 68754110111222211 111222   236788888999999986


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-chhh---HH
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-TMLD---VV  192 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t~ld---~~  192 (353)
                      ..                -....+.++.+.+.+.+  ++ ++++- ....-. +.+.++..-- --+++. ..+-   -.
T Consensus        81 T~----------------p~a~~~~~~~al~~G~~--vV-igTTG-~s~~~~-~~L~~aa~~~-~vv~a~N~s~Gv~l~~  138 (272)
T 4f3y_A           81 TL----------------PEGTLVHLDAALRHDVK--LV-IGTTG-FSEPQK-AQLRAAGEKI-ALVFSANMSVGVNVTM  138 (272)
T ss_dssp             SC----------------HHHHHHHHHHHHHHTCE--EE-ECCCC-CCHHHH-HHHHHHTTTS-EEEECSCCCHHHHHHH
T ss_pred             CC----------------HHHHHHHHHHHHHcCCC--EE-EECCC-CCHHHH-HHHHHHhccC-CEEEECCCCHHHHHHH
Confidence            41                11233444444545433  22 33221 111111 1123332210 012222 1111   23


Q ss_pred             HHHHHHHHHhCCCCCCCcceEEeecCC
Q 018618          193 RANTFVAEVLGLDPRDVDVPVVGGHAG  219 (353)
Q Consensus       193 R~~~~lA~~l~v~~~~v~~~viG~hg~  219 (353)
                      ++-..+|+.|+   .+.++.|+=-|+.
T Consensus       139 ~~~~~aa~~l~---~~~diei~E~HH~  162 (272)
T 4f3y_A          139 KLLEFAAKQFA---QGYDIEIIEAHHR  162 (272)
T ss_dssp             HHHHHHHHHTS---SSCEEEEEEEECT
T ss_pred             HHHHHHHHhcC---cCCCEEEEEecCC
Confidence            56677788876   4567788888886

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.05  E-value=0.19  Score=45.21  Aligned_cols=157  Identities=11%  Similarity=0.115  Sum_probs=86.3

Q ss_pred             CeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhh
Q 018618           42 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENA  106 (353)
Q Consensus        42 ~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~a  106 (353)
                      +.+.|+||+|  -+|..+|..|++.|.  +|++.|+++  .+.....+.... ......+. .-+|.          .+.
T Consensus         7 K~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            7 KTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             CEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678889865  699999999999998  999999987  233333333322 12222211 11222          133


Q ss_pred             hCCCcEEEEcCCCCCCC-------CCCHHHH---HHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          107 LTGMDLVIIPAGVPRKP-------GMTRDDL---FNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~-------g~~r~~~---~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      +-..|++|..+|.....       ..+..++   +..|.......++....+- ..+.||+++.-....           
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~-----------  152 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF-----------  152 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS-----------
T ss_pred             hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc-----------
Confidence            46899999998854211       1233333   3445555555555555544 357777776422111           


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                       +.|..-.++.+.-.-..|-+.+|..++  +..|++-.+-
T Consensus       153 -~~~~~~~Y~asKaal~~ltr~lA~Ela--~~gIrVN~V~  189 (256)
T 4fs3_A          153 -AVQNYNVMGVAKASLEANVKYLALDLG--PDNIRVNAIS  189 (256)
T ss_dssp             -CCTTTHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             -CcccchhhHHHHHHHHHHHHHHHHHhC--ccCeEEEEEe
Confidence             122222333333333456677777774  5556554443

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.05  E-value=0.0072  Score=56.58  Aligned_cols=64  Identities=25%  Similarity=0.349  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||. |.+|..++..+...|.  +|+.+|++.....+.++   .    +..    .++++.+++||+|++..
T Consensus       141 ~g~~vgIiG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~---g----~~~----~~l~ell~~aDvV~l~~  204 (307)
T 1wwk_A          141 EGKTIGIIGF-GRIGYQVAKIANALGM--NILLYDPYPNEERAKEV---N----GKF----VDLETLLKESDVVTIHV  204 (307)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHHHHHHT---T----CEE----CCHHHHHHHCSEEEECC
T ss_pred             CCceEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCCChhhHhhc---C----ccc----cCHHHHHhhCCEEEEec
Confidence            3569999999 9999999999988887  99999987643222211   1    121    24678899999999985

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=96.00  E-value=0.029  Score=54.86  Aligned_cols=91  Identities=15%  Similarity=0.202  Sum_probs=61.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH-HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~-~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ...+|+|+|. |.+|..++..+...|.  +|+.+|+++... .+.  ...     ...    .++++++++||+|+.+.|
T Consensus       219 ~GktV~ViG~-G~IGk~vA~~Lra~Ga--~Viv~D~dp~ra~~A~--~~G-----~~v----~~Leeal~~ADIVi~atg  284 (435)
T 3gvp_A          219 GGKQVVVCGY-GEVGKGCCAALKAMGS--IVYVTEIDPICALQAC--MDG-----FRL----VKLNEVIRQVDIVITCTG  284 (435)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH--HTT-----CEE----CCHHHHTTTCSEEEECSS
T ss_pred             cCCEEEEEee-CHHHHHHHHHHHHCCC--EEEEEeCChhhhHHHH--HcC-----CEe----ccHHHHHhcCCEEEECCC
Confidence            3469999999 9999999999988887  899999876221 111  111     111    257889999999999744


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      .+   +.-.           .+.   +....|+++|++++.+.
T Consensus       285 t~---~lI~-----------~e~---l~~MK~gailINvgrg~  310 (435)
T 3gvp_A          285 NK---NVVT-----------REH---LDRMKNSCIVCNMGHSN  310 (435)
T ss_dssp             CS---CSBC-----------HHH---HHHSCTTEEEEECSSTT
T ss_pred             Cc---ccCC-----------HHH---HHhcCCCcEEEEecCCC
Confidence            32   1110           122   22335789999998664

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.00  E-value=0.017  Score=53.38  Aligned_cols=88  Identities=18%  Similarity=0.228  Sum_probs=56.5

Q ss_pred             hhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhh
Q 018618           28 LRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLEN  105 (353)
Q Consensus        28 ~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~  105 (353)
                      |.+.+.+.-...+..++.|+|+ |-+|..++..|+..|. .+|.++|++.  ++..+.++........+... ...++++
T Consensus       114 ~~~~l~~~~~~l~~k~vlVlGa-GG~g~aia~~L~~~G~-~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~-~~~~l~~  190 (283)
T 3jyo_A          114 FGRGMEEGLPNAKLDSVVQVGA-GGVGNAVAYALVTHGV-QKLQVADLDTSRAQALADVINNAVGREAVVGV-DARGIED  190 (283)
T ss_dssp             HHHHHHHHCTTCCCSEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSSHHHHHHHHHHHHHHHTSCCEEEE-CSTTHHH
T ss_pred             HHHHHHHhCcCcCCCEEEEECC-cHHHHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHhhcCCceEEEc-CHHHHHH
Confidence            4444433222234568999999 9999999999998875 3799999876  33334444322111234333 1246778


Q ss_pred             hhCCCcEEEEcCC
Q 018618          106 ALTGMDLVIIPAG  118 (353)
Q Consensus       106 al~~ADiVIi~ag  118 (353)
                      ++.++|+||.+..
T Consensus       191 ~l~~~DiVInaTp  203 (283)
T 3jyo_A          191 VIAAADGVVNATP  203 (283)
T ss_dssp             HHHHSSEEEECSS
T ss_pred             HHhcCCEEEECCC
Confidence            8899999999753

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=95.98  E-value=0.029  Score=50.47  Aligned_cols=147  Identities=10%  Similarity=0.090  Sum_probs=80.7

Q ss_pred             CeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHHHHHHhcCCCCCeEEEEe-CCCc---hhhh------
Q 018618           42 FKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGVTADISHMDTGAVVRGFL-GQPQ---LENA------  106 (353)
Q Consensus        42 ~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~~~dl~~~~~~~~v~~~~-~t~d---~~~a------  106 (353)
                      +++.|+||+  |.+|.+++..|+..|.  .++++|.+.  . .....++.... ...+..+. .-+|   .+++      
T Consensus        21 k~vlITGas~~~giG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           21 KVVVVTGASGPKGMGIEAARGCAEMGA--AVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CEEEETTCCSSSSHHHHHHHHHHHTSC--EEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCCCChHHHHHHHHHHCCC--eEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHHHHHHH
Confidence            478899998  7999999999999998  899998876  1 33333443211 11222111 0112   2222      


Q ss_pred             -hCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          107 -LTGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       107 -l~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                       +...|++|..||.....   ..+   ....+..|+.....+.+.    +.+.. .+.+|+++......           
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-----------  165 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHI-----------  165 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS-----------
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccc-----------
Confidence             23679999999865322   122   233456666554444444    45443 45566555432211           


Q ss_pred             CCCC-CCceEeechhhHHHHHHHHHHHhC
Q 018618          176 GTYD-PKKLLGVTMLDVVRANTFVAEVLG  203 (353)
Q Consensus       176 ~~~~-~~kviG~t~ld~~R~~~~lA~~l~  203 (353)
                      ..++ ..-.++.+......+-+.+++.++
T Consensus       166 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  194 (267)
T 3gdg_A          166 ANFPQEQTSYNVAKAGCIHMARSLANEWR  194 (267)
T ss_dssp             CCSSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cCCCCCCCcchHHHHHHHHHHHHHHHHhc
Confidence            1111 222344444444556777888875

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.98  E-value=0.0096  Score=56.73  Aligned_cols=96  Identities=25%  Similarity=0.324  Sum_probs=62.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC-
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV-  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~-  119 (353)
                      .++|+|||. |.+|+.+|..+..-|.  +|..+|+.......   .. .    ...   ..++++.+++||+|++.... 
T Consensus       173 gktvGIIGl-G~IG~~vA~~l~~~G~--~V~~~dr~~~~~~~---~~-g----~~~---~~~l~ell~~sDvV~l~~Plt  238 (345)
T 4g2n_A          173 GRRLGIFGM-GRIGRAIATRARGFGL--AIHYHNRTRLSHAL---EE-G----AIY---HDTLDSLLGASDIFLIAAPGR  238 (345)
T ss_dssp             TCEEEEESC-SHHHHHHHHHHHTTTC--EEEEECSSCCCHHH---HT-T----CEE---CSSHHHHHHTCSEEEECSCCC
T ss_pred             CCEEEEEEe-ChhHHHHHHHHHHCCC--EEEEECCCCcchhh---hc-C----CeE---eCCHHHHHhhCCEEEEecCCC
Confidence            469999999 9999999999987777  99999987522111   11 1    111   14678899999999997532 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                      +...++     +  |    .+   .+...-|++++|+++  ..+|.-
T Consensus       239 ~~T~~l-----i--~----~~---~l~~mk~gailIN~aRG~~vde~  271 (345)
T 4g2n_A          239 PELKGF-----L--D----HD---RIAKIPEGAVVINISRGDLINDD  271 (345)
T ss_dssp             GGGTTC-----B--C----HH---HHHHSCTTEEEEECSCGGGBCHH
T ss_pred             HHHHHH-----h--C----HH---HHhhCCCCcEEEECCCCchhCHH
Confidence            111111     0  1    12   233345789999987  455544

>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*

Probab=95.95  E-value=0.022  Score=54.34  Aligned_cols=73  Identities=19%  Similarity=0.345  Sum_probs=49.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+|+|||+ |.+|...+..+.......+|.++|++.  ++..+.++... ....+..   .+++++++++||+||++..
T Consensus       129 ~~~v~iIGa-G~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~~-~g~~~~~---~~~~~eav~~aDiVi~aTp  203 (350)
T 1x7d_A          129 ARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEY-SGLTIRR---ASSVAEAVKGVDIITTVTA  203 (350)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTC-TTCEEEE---CSSHHHHHTTCSEEEECCC
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHhc-cCceEEE---eCCHHHHHhcCCEEEEecc
Confidence            459999999 999999887665432345999999976  33334444321 1122333   2577899999999999753

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.93  E-value=0.03  Score=56.11  Aligned_cols=118  Identities=18%  Similarity=0.109  Sum_probs=72.7

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----cHHHHHHHhcCCCCCeEEEEeC-CCc---hhhhhC
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFLG-QPQ---LENALT  108 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~~~~~~dl~~~~~~~~v~~~~~-t~d---~~~al~  108 (353)
                      +.+..+|.|+||+|.+|..++..|+..|. ..|++++++.     ......++...  ...+..+.. -+|   ++++++
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~-~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~  332 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGA-ERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVT  332 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTC-SEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCC-cEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHh
Confidence            44567899999999999999999988876 2589998865     12233445432  234443321 133   333444


Q ss_pred             --CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          109 --GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       109 --~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                        ..|+||+++|.....   ..+   ....+..|+.....+.+.+....+...++++|
T Consensus       333 ~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~S  390 (511)
T 2z5l_A          333 AYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFS  390 (511)
T ss_dssp             HSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEE
T ss_pred             cCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEe
Confidence              389999999875422   122   23345678888888877766541223344443

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.92  E-value=0.019  Score=51.99  Aligned_cols=73  Identities=21%  Similarity=0.363  Sum_probs=48.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-------------------cHH--HHHHHhcCCCCCeEEEEeCC-
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-------------------TPG--VTADISHMDTGAVVRGFLGQ-  100 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-------------------~~~--~~~dl~~~~~~~~v~~~~~t-  100 (353)
                      ||+|+|+ |.+|+.++..|+..|. .+|.++|.+.                   .++  .+..+........+..+... 
T Consensus        30 ~VlvvG~-GglG~~va~~La~~Gv-g~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  107 (251)
T 1zud_1           30 QVLIIGL-GGLGTPAALYLAGAGV-GTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL  107 (251)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTC-SEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             cEEEEcc-CHHHHHHHHHHHHcCC-CeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            9999999 8999999999999987 4899999753                   111  12233332222345443211 


Q ss_pred             --CchhhhhCCCcEEEEcC
Q 018618          101 --PQLENALTGMDLVIIPA  117 (353)
Q Consensus       101 --~d~~~al~~ADiVIi~a  117 (353)
                        .+..+.++++|+||.+.
T Consensus       108 ~~~~~~~~~~~~DvVi~~~  126 (251)
T 1zud_1          108 TGEALKDAVARADVVLDCT  126 (251)
T ss_dssp             CHHHHHHHHHHCSEEEECC
T ss_pred             CHHHHHHHHhcCCEEEECC
Confidence              13345678899999874

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=95.90  E-value=0.0045  Score=58.27  Aligned_cols=96  Identities=21%  Similarity=0.262  Sum_probs=61.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC-
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV-  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~-  119 (353)
                      .++|+|||. |.+|+.+|..+...|.  +|..+|++...        ..   .+.......++++.+++||+|++.... 
T Consensus       139 g~tvGIiG~-G~IG~~vA~~l~~~G~--~V~~~dr~~~~--------~~---~~~~~~~~~~l~ell~~aDiV~l~~Plt  204 (315)
T 3pp8_A          139 EFSVGIMGA-GVLGAKVAESLQAWGF--PLRCWSRSRKS--------WP---GVESYVGREELRAFLNQTRVLINLLPNT  204 (315)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHTTTC--CEEEEESSCCC--------CT---TCEEEESHHHHHHHHHTCSEEEECCCCC
T ss_pred             CCEEEEEee-CHHHHHHHHHHHHCCC--EEEEEcCCchh--------hh---hhhhhcccCCHHHHHhhCCEEEEecCCc
Confidence            569999999 9999999999988787  89999986521        00   111111224678899999999997421 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                      +...++     +  |       .+.+....|++++|+++  .++|.-
T Consensus       205 ~~t~~l-----i--~-------~~~l~~mk~gailIN~aRG~~vd~~  237 (315)
T 3pp8_A          205 AQTVGI-----I--N-------SELLDQLPDGAYVLNLARGVHVQEA  237 (315)
T ss_dssp             GGGTTC-----B--S-------HHHHTTSCTTEEEEECSCGGGBCHH
T ss_pred             hhhhhh-----c--c-------HHHHhhCCCCCEEEECCCChhhhHH
Confidence            111111     0  1       12233345789999987  445543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.90  E-value=0.048  Score=51.12  Aligned_cols=113  Identities=17%  Similarity=0.144  Sum_probs=65.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHH----HHHHHhcCCCCCeEEEEe-CCCc---hhhhhC--
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPG----VTADISHMDTGAVVRGFL-GQPQ---LENALT--  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~----~~~dl~~~~~~~~v~~~~-~t~d---~~~al~--  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  +|++.+++.   ...    ....+...  ...+..+. .-+|   .+++++  
T Consensus         6 k~vlVTGas~GIG~aia~~L~~~G~--~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            6 KIILITGASSGFGRLTAEALAGAGH--RVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC--EEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHH
Confidence            4789999999999999999999998  888877652   111    11111111  12222221 1122   233343  


Q ss_pred             -----CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecC
Q 018618          109 -----GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  159 (353)
Q Consensus       109 -----~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  159 (353)
                           ..|++|..||.... +  ..+   ....+..|+.....+.+.+    ++. ..+.||++|.
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~-~~g~iV~isS  146 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQ-KHGLLIWISS  146 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECC
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEEec
Confidence                 89999999986421 1  122   2345567776665555554    544 3456666654

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=95.90  E-value=0.012  Score=55.02  Aligned_cols=70  Identities=16%  Similarity=0.220  Sum_probs=47.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||+ |.+|..++..|... + ..+|.++|+++....  ++.... ...+..   .+++++++++||+|+++.
T Consensus       134 ~~~~igiIG~-G~~g~~~a~~l~~~~g-~~~V~v~dr~~~~~~--~l~~~~-~~~~~~---~~~~~e~v~~aDiVi~at  204 (312)
T 2i99_A          134 SSEVLCILGA-GVQAYSHYEIFTEQFS-FKEVRIWNRTKENAE--KFADTV-QGEVRV---CSSVQEAVAGADVIITVT  204 (312)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHHCC-CSEEEEECSSHHHHH--HHHHHS-SSCCEE---CSSHHHHHTTCSEEEECC
T ss_pred             CCcEEEEECC-cHHHHHHHHHHHHhCC-CcEEEEEcCCHHHHH--HHHHHh-hCCeEE---eCCHHHHHhcCCEEEEEe
Confidence            3469999999 99999999888765 5 358999998752221  222110 002232   256788999999999975

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.88  E-value=0.0073  Score=57.58  Aligned_cols=66  Identities=26%  Similarity=0.404  Sum_probs=48.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..++|+|||. |.+|+.+|..+...|.  +|+.+|++.......++.       +..   ..++++.++.||+|++...
T Consensus       167 ~g~tvGIIG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~g-------~~~---~~~l~ell~~aDvV~l~~P  232 (347)
T 1mx3_A          167 RGETLGIIGL-GRVGQAVALRAKAFGF--NVLFYDPYLSDGVERALG-------LQR---VSTLQDLLFHSDCVTLHCG  232 (347)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCTTHHHHHT-------CEE---CSSHHHHHHHCSEEEECCC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCC--EEEEECCCcchhhHhhcC-------Cee---cCCHHHHHhcCCEEEEcCC
Confidence            4569999999 9999999999988787  899999865322222111       111   1356788999999999753

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.86  E-value=0.0047  Score=60.07  Aligned_cols=76  Identities=22%  Similarity=0.163  Sum_probs=49.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCC-cEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-C---CCchhhhhCC--Cc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLV-SVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-G---QPQLENALTG--MD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~-~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~---t~d~~~al~~--AD  111 (353)
                      ++||+|+|| |.+|+.++..|++.+.. .+|++.|++.  +...+.++.... ...+.... .   ..++++++++  +|
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~D   78 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQ   78 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCC
Confidence            359999999 99999999999988743 6999999976  333344443311 01122111 1   1345566666  89


Q ss_pred             EEEEcCC
Q 018618          112 LVIIPAG  118 (353)
Q Consensus       112 iVIi~ag  118 (353)
                      +||.+++
T Consensus        79 vVin~ag   85 (405)
T 4ina_A           79 IVLNIAL   85 (405)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999976

>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}

Probab=95.85  E-value=0.043  Score=51.52  Aligned_cols=128  Identities=16%  Similarity=0.148  Sum_probs=73.4

Q ss_pred             CCeEEEEcCCCCcHHH-HHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh--CCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~-la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al--~~ADiVIi~a  117 (353)
                      ++||.|||. |..|.+ +|..|...|.  +|..+|.+........|....  ..+.  .+ .+. +.+  .++|+||.+.
T Consensus         4 ~~~i~~iGi-Gg~Gms~~A~~L~~~G~--~V~~~D~~~~~~~~~~L~~~g--i~v~--~g-~~~-~~l~~~~~d~vV~Sp   74 (326)
T 3eag_A            4 MKHIHIIGI-GGTFMGGLAAIAKEAGF--EVSGCDAKMYPPMSTQLEALG--IDVY--EG-FDA-AQLDEFKADVYVIGN   74 (326)
T ss_dssp             CCEEEEESC-CSHHHHHHHHHHHHTTC--EEEEEESSCCTTHHHHHHHTT--CEEE--ES-CCG-GGGGSCCCSEEEECT
T ss_pred             CcEEEEEEE-CHHHHHHHHHHHHhCCC--EEEEEcCCCCcHHHHHHHhCC--CEEE--CC-CCH-HHcCCCCCCEEEECC
Confidence            569999999 999995 8889999998  999999875221222344322  2333  23 233 345  4899999998


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHh-hCCCcEEEEecCCCC--chhHHHHHHHHHhCCCCC
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNATVNLISNPVN--STVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~-~~p~a~viv~tNPv~--~~t~~~~~~~~~~~~~~~  180 (353)
                      |.|...- .......++++++.+. +.+.+ ...+..+|-+|-...  ..|.++++++.. .|.++
T Consensus        75 gi~~~~p-~~~~a~~~gi~v~~~~-e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~-~g~~~  137 (326)
T 3eag_A           75 VAKRGMD-VVEAILNLGLPYISGP-QWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEY-AGLAP  137 (326)
T ss_dssp             TCCTTCH-HHHHHHHTTCCEEEHH-HHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHH-TTCCC
T ss_pred             CcCCCCH-HHHHHHHcCCcEEeHH-HHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHH-cCCCc
Confidence            8764211 1112223344444332 22222 223445666664443  555666666644 45544

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=95.84  E-value=0.033  Score=52.26  Aligned_cols=115  Identities=13%  Similarity=0.118  Sum_probs=63.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cH---HHHHHHhc-CCCCCeEEEEe-CCCc---hhhhhC---
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TP---GVTADISH-MDTGAVVRGFL-GQPQ---LENALT---  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~---~~~~dl~~-~~~~~~v~~~~-~t~d---~~~al~---  108 (353)
                      ++|.|+||+|.+|.+++..|++.|.  ++++++.+.  ..   .....+.. ......+..+. .-+|   .+++++   
T Consensus         3 k~vlVTGas~GIG~ala~~L~~~G~--~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            3 TVVLITGCSSGIGLHLAVRLASDPS--QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTT--CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            4789999999999999999999986  566666543  21   11112210 00112233221 1122   333444   


Q ss_pred             --CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHH----HHhhCCCcEEEEecC
Q 018618          109 --GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEG----IAKCCPNATVNLISN  159 (353)
Q Consensus       109 --~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~----i~~~~p~a~viv~tN  159 (353)
                        ..|++|+.+|.....   ..+   ....+..|+.....+++.    +++. ..+.||++|.
T Consensus        81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-~~g~IV~isS  142 (327)
T 1jtv_A           81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR-GSGRVLVTGS  142 (327)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEE
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCEEEEECC
Confidence              489999999864321   122   234556676665555555    4433 3456666653

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=95.83  E-value=0.012  Score=56.66  Aligned_cols=126  Identities=23%  Similarity=0.237  Sum_probs=74.2

Q ss_pred             HHhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCC
Q 018618           14 ISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGA   92 (353)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~   92 (353)
                      +.|+.++-..     . -+-+..++.++.||+|+|+ |.+|...+..+...|.  +|..+|++. ....+.++.-.....
T Consensus       163 ~aa~~l~~~~-----~-~l~~~~~~v~~~kV~ViG~-G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~lGa~~~~l  233 (381)
T 3p2y_A          163 LGASLSTRFV-----P-MLTTAAGTVKPASALVLGV-GVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRSVGAQWLDL  233 (381)
T ss_dssp             HHHHHCSSCS-----S-CEECSSCEECCCEEEEESC-SHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHHTTCEECCC
T ss_pred             HHHHHhhhhh-----h-hhhcccCCcCCCEEEEECc-hHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHcCCeEEec
Confidence            4556665443     2 2345666788899999999 9999999998887786  899999987 223333321000000


Q ss_pred             e-----EEEEe----------CCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEe
Q 018618           93 V-----VRGFL----------GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI  157 (353)
Q Consensus        93 ~-----v~~~~----------~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~  157 (353)
                      .     ...+.          ...++++++++||+||.++..|......   +      +.++..+.+   .|.++|+.+
T Consensus       234 ~~~~~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~---L------vt~emv~~M---kpGsVIVDv  301 (381)
T 3p2y_A          234 GIDAAGEGGYARELSEAERAQQQQALEDAITKFDIVITTALVPGRPAPR---L------VTAAAATGM---QPGSVVVDL  301 (381)
T ss_dssp             C-------------CHHHHHHHHHHHHHHHTTCSEEEECCCCTTSCCCC---C------BCHHHHHTS---CTTCEEEET
T ss_pred             cccccccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCCcccce---e------ecHHHHhcC---CCCcEEEEE
Confidence            0     00000          0125678899999999987655321100   0      012333333   478888887


Q ss_pred             cCC
Q 018618          158 SNP  160 (353)
Q Consensus       158 tNP  160 (353)
                      +-+
T Consensus       302 A~d  304 (381)
T 3p2y_A          302 AGE  304 (381)
T ss_dssp             TGG
T ss_pred             eCC
Confidence            644

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.82  E-value=0.012  Score=55.80  Aligned_cols=64  Identities=27%  Similarity=0.364  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||. |.+|..+|..+...|.  +|+.+|++.....+.   ...  .  ..    .++++.+++||+|++..
T Consensus       164 ~g~tvgIIGl-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~~~---~~g--~--~~----~~l~ell~~aDvV~l~~  227 (335)
T 2g76_A          164 NGKTLGILGL-GRIGREVATRMQSFGM--KTIGYDPIISPEVSA---SFG--V--QQ----LPLEEIWPLCDFITVHT  227 (335)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSSCHHHHH---HTT--C--EE----CCHHHHGGGCSEEEECC
T ss_pred             CcCEEEEEeE-CHHHHHHHHHHHHCCC--EEEEECCCcchhhhh---hcC--c--ee----CCHHHHHhcCCEEEEec
Confidence            4569999999 9999999999987776  999999876332221   111  1  11    25678899999999985

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.79  E-value=0.019  Score=55.84  Aligned_cols=124  Identities=20%  Similarity=0.221  Sum_probs=73.6

Q ss_pred             HHhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCC
Q 018618           14 ISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGA   92 (353)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~   92 (353)
                      +.||.++-..     . -+-+..++.++.||+|+|+ |.+|...+..+...|.  +|..+|++.. ...+.++.-.....
T Consensus       169 ~aa~~l~~~~-----~-~l~t~~g~v~~~kV~ViG~-G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~~G~~~~~~  239 (405)
T 4dio_A          169 DAAYEYDRAL-----P-MMMTAAGTVPAAKIFVMGA-GVAGLQAIATARRLGA--VVSATDVRPAAKEQVASLGAKFIAV  239 (405)
T ss_dssp             HHHHHCSSCS-----S-CEEETTEEECCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSTTHHHHHHHTTCEECCC
T ss_pred             HHHHHhHhhh-----c-hhhccCCCcCCCEEEEECC-cHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHcCCceeec
Confidence            5567776433     2 2334556678899999999 9999999999988887  8999999873 23333321100000


Q ss_pred             e---------EEEEeC----------CCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcE
Q 018618           93 V---------VRGFLG----------QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAT  153 (353)
Q Consensus        93 ~---------v~~~~~----------t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~  153 (353)
                      .         ...+..          ..++++++++||+||.++..|.+....   ++      .++..   +...|.++
T Consensus       240 ~~~~~~d~~~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~---Lv------t~emv---~~Mk~GsV  307 (405)
T 4dio_A          240 EDEEFKAAETAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIPGRPAPR---LV------TREML---DSMKPGSV  307 (405)
T ss_dssp             CC-----------------CHHHHHHHHHHHHHHHTCSEEEECCCCSSSCCCC---CB------CHHHH---TTSCTTCE
T ss_pred             ccccccccccccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCCCCCCCE---Ee------cHHHH---hcCCCCCE
Confidence            0         001110          125678899999999987655321110   00      12333   33348888


Q ss_pred             EEEec
Q 018618          154 VNLIS  158 (353)
Q Consensus       154 viv~t  158 (353)
                      |+.++
T Consensus       308 IVDvA  312 (405)
T 4dio_A          308 VVDLA  312 (405)
T ss_dssp             EEETT
T ss_pred             EEEEe
Confidence            88776

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.78  E-value=0.037  Score=51.13  Aligned_cols=96  Identities=19%  Similarity=0.161  Sum_probs=63.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ..++|+|+|+ |.+|..++..+...|.  +|..+|++.....  .+...  ......   ..++++.++++|+|+.+...
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~--~V~~~dr~~~~~~--~~~~~--g~~~~~---~~~l~~~l~~aDvVi~~~p~  223 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGA--KVKVGARESDLLA--RIAEM--GMEPFH---ISKAAQELRDVDVCINTIPA  223 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSHHHHH--HHHHT--TSEEEE---GGGHHHHTTTCSEEEECCSS
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEEECCHHHHH--HHHHC--CCeecC---hhhHHHHhcCCCEEEECCCh
Confidence            4569999998 9999999999988887  9999998652211  12221  122111   23577889999999998632


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCc
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNS  163 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~  163 (353)
                          ++-       |.    +   .+....|.+++++++ +|.++
T Consensus       224 ----~~i-------~~----~---~l~~mk~~~~lin~ar~~~~~  250 (293)
T 3d4o_A          224 ----LVV-------TA----N---VLAEMPSHTFVIDLASKPGGT  250 (293)
T ss_dssp             ----CCB-------CH----H---HHHHSCTTCEEEECSSTTCSB
T ss_pred             ----HHh-------CH----H---HHHhcCCCCEEEEecCCCCCC
Confidence                211       00    1   222334788999988 77664

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=95.75  E-value=0.041  Score=56.29  Aligned_cols=114  Identities=14%  Similarity=0.165  Sum_probs=61.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC---------CC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhh---
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV---------VN--TPGVTADISHMDTGAVVRGFLGQPQLENAL---  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~---------~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al---  107 (353)
                      +.+.|+||+|.+|.+++..|++.|.  .|++.|+         +.  ....+.++..... ..+.......+.++.+   
T Consensus        20 k~~lVTGas~GIG~aiA~~La~~Ga--~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           20 RVAVVTGAGAGLGREYALLFAERGA--KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGGHHHHHC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHHHHHHHHHH
Confidence            3678889999999999999999997  9999987         22  2333344443221 1111111112222333   


Q ss_pred             ----CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHH----HhhCCCcEEEEecC
Q 018618          108 ----TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGI----AKCCPNATVNLISN  159 (353)
Q Consensus       108 ----~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i----~~~~p~a~viv~tN  159 (353)
                          ...|++|..||.....   .++   ....+..|+.....+.+.+    ++. ..+.||++|.
T Consensus        97 ~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~-~~g~IV~isS  161 (613)
T 3oml_A           97 IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQ-NYGRIIMTSS  161 (613)
T ss_dssp             --------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEECC
T ss_pred             HHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCEEEEECC
Confidence                3679999999875322   223   2334566766555555544    433 3466776654

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=95.73  E-value=0.026  Score=54.30  Aligned_cols=72  Identities=15%  Similarity=0.309  Sum_probs=46.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHH-HHHhCCC-CcEEEEEeCCCcHHHH-HHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAM-LMKINPL-VSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~-~l~~~~~-~~el~L~D~~~~~~~~-~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .++||+|+||+|++|.-+.. .|.+.++ ..++.++.... .|.. .++...  ...+..   .++. +++.++|+|+.+
T Consensus         3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~--~~~v~~---~~~~-~~~~~vDvvf~a   75 (377)
T 3uw3_A            3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSN-AGGKAPSFAKN--ETTLKD---ATSI-DDLKKCDVIITC   75 (377)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSC-TTSBCCTTCCS--CCBCEE---TTCH-HHHHTCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechh-cCCCHHHcCCC--ceEEEe---CCCh-hHhcCCCEEEEC
Confidence            45799999999999999998 7777774 45888886543 2211 122111  112221   1233 557899999997


Q ss_pred             CC
Q 018618          117 AG  118 (353)
Q Consensus       117 ag  118 (353)
                      .+
T Consensus        76 ~~   77 (377)
T 3uw3_A           76 QG   77 (377)
T ss_dssp             SC
T ss_pred             CC
Confidence            54

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.72  E-value=0.063  Score=48.18  Aligned_cols=34  Identities=18%  Similarity=0.184  Sum_probs=31.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +++.|+||+|.+|.+++..|++.|.  +|+++|++.
T Consensus         6 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~   39 (260)
T 2qq5_A            6 QVCVVTGASRGIGRGIALQLCKAGA--TVYITGRHL   39 (260)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCH
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCH
Confidence            4789999999999999999999997  899999875

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.72  E-value=0.034  Score=54.78  Aligned_cols=115  Identities=19%  Similarity=0.257  Sum_probs=69.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHH-hcCCCCCeEEE-EeCCCchhhhh-------CC-Cc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADI-SHMDTGAVVRG-FLGQPQLENAL-------TG-MD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl-~~~~~~~~v~~-~~~t~d~~~al-------~~-AD  111 (353)
                      ..+.|+||+|.+|..++..|++.|.  +|+++|.+.......++ ..... ..+.. ++...+.++.+       .+ .|
T Consensus       214 k~~LVTGgsgGIG~aiA~~La~~Ga--~Vvl~~r~~~~~~l~~~~~~~~~-~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          214 KVAVVTGAARGIGATIAEVFARDGA--TVVAIDVDGAAEDLKRVADKVGG-TALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEECGGGHHHHHHHHHHHTC-EEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CEEEEeCCchHHHHHHHHHHHHCCC--EEEEEeCCccHHHHHHHHHHcCC-eEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            4788999999999999999999987  89999986522111111 11110 00110 01112222222       23 89


Q ss_pred             EEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC---CCcEEEEecC
Q 018618          112 LVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC---PNATVNLISN  159 (353)
Q Consensus       112 iVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~---p~a~viv~tN  159 (353)
                      +||+.+|.....   .++   ....+..|+.....+.+.+...-   +.+.||++|.
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS  347 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSS  347 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECC
T ss_pred             EEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeC
Confidence            999999975432   223   23456778888888888776542   4566777664

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=95.64  E-value=0.0066  Score=58.03  Aligned_cols=98  Identities=18%  Similarity=0.123  Sum_probs=58.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-----CCcEEEEEeCCCcHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-----LVSVLHLYDVVNTPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-----~~~el~L~D~~~~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      ++||+|+||+|.+|..+...|...+     . .||+++-.....+...+-.+....  ..+....  .+ .++++++|+|
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~-~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~--~~-~~~~~~~DvV   84 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGR-LRIGALTAATSAGSTLGEHHPHLTPLAHRVVEP--TE-AAVLGGHDAV   84 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTS-EEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEE--CC-HHHHTTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCcc-EEEEEEECCCcCCCchhhhcccccccceeeecc--CC-HHHhcCCCEE
Confidence            4699999999999999999998776     3 377777532211221221111110  1122111  23 3567899999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      +.+.|..    .            .+++++.+ +.  .+++|..|.+-
T Consensus        85 f~alg~~----~------------s~~~~~~~-~~--G~~vIDlSa~~  113 (352)
T 2nqt_A           85 FLALPHG----H------------SAVLAQQL-SP--ETLIIDCGADF  113 (352)
T ss_dssp             EECCTTS----C------------CHHHHHHS-CT--TSEEEECSSTT
T ss_pred             EECCCCc----c------------hHHHHHHH-hC--CCEEEEECCCc
Confidence            9986432    1            23566665 33  46788888775

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.62  E-value=0.024  Score=53.65  Aligned_cols=65  Identities=26%  Similarity=0.347  Sum_probs=48.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..++|+|||. |.+|+.+|..+...|.  +|+.+|++.....+.++.       +..    .++++.+++||+|+++..
T Consensus       145 ~g~~vgIIG~-G~iG~~vA~~l~~~G~--~V~~~d~~~~~~~~~~~g-------~~~----~~l~e~l~~aDiVil~vp  209 (333)
T 2d0i_A          145 YGKKVGILGM-GAIGKAIARRLIPFGV--KLYYWSRHRKVNVEKELK-------ARY----MDIDELLEKSDIVILALP  209 (333)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTC--EEEEECSSCCHHHHHHHT-------EEE----CCHHHHHHHCSEEEECCC
T ss_pred             CcCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCcchhhhhhcC-------cee----cCHHHHHhhCCEEEEcCC
Confidence            4569999999 9999999999988887  999999877432222211       221    256788899999999853

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=95.60  E-value=0.0075  Score=56.58  Aligned_cols=59  Identities=22%  Similarity=0.245  Sum_probs=46.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||. |.+|..++..+...|.  +|+.+|++.....            +.    ..++++.++.||+|++..
T Consensus       143 ~g~~vgIIG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~------------~~----~~~l~ell~~aDvV~l~~  201 (311)
T 2cuk_A          143 QGLTLGLVGM-GRIGQAVAKRALAFGM--RVVYHARTPKPLP------------YP----FLSLEELLKEADVVSLHT  201 (311)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSSS------------SC----BCCHHHHHHHCSEEEECC
T ss_pred             CCCEEEEEEE-CHHHHHHHHHHHHCCC--EEEEECCCCcccc------------cc----cCCHHHHHhhCCEEEEeC
Confidence            4569999999 9999999999988887  8999998752110            11    135678899999999975

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.59  E-value=0.03  Score=51.28  Aligned_cols=70  Identities=11%  Similarity=0.198  Sum_probs=50.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      +.+||+|||+ |.+|..++..|...|.  +|.++|++..  .+.++....   .+..   ..+++++++++|+||.+...
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~g~--~V~v~~r~~~--~~~~l~~~~---g~~~---~~~~~~~~~~aDiVi~atp~  196 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKEGA--KVFLWNRTKE--KAIKLAQKF---PLEV---VNSPEEVIDKVQVIVNTTSV  196 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSSHH--HHHHHTTTS---CEEE---CSCGGGTGGGCSEEEECSST
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHcCC--EEEEEECCHH--HHHHHHHHc---CCee---ehhHHhhhcCCCEEEEeCCC
Confidence            3469999998 9999999999988886  9999998642  223333221   1332   23567788999999998654


Q ss_pred             C
Q 018618          120 P  120 (353)
Q Consensus       120 ~  120 (353)
                      .
T Consensus       197 ~  197 (275)
T 2hk9_A          197 G  197 (275)
T ss_dssp             T
T ss_pred             C
Confidence            3

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=95.56  E-value=0.033  Score=53.53  Aligned_cols=70  Identities=17%  Similarity=0.333  Sum_probs=45.2

Q ss_pred             CeEEEEcCCCCcHHHHHH-HHHhCCC-CcEEEEEeCCCcHHHH-HHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAM-LMKINPL-VSVLHLYDVVNTPGVT-ADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~-~l~~~~~-~~el~L~D~~~~~~~~-~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |||+|+||+|++|.-+.. .|.+.++ ..++.++.... .|.. .++...  ...+..   .++. +.+.++|+|+.+.|
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~~~--~~~~~~---~~~~-~~~~~~Dvvf~a~~   73 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFGKD--AGMLHD---AFDI-ESLKQLDAVITCQG   73 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSSSC--CCBCEE---TTCH-HHHTTCSEEEECSC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhCCC--ceEEEe---cCCh-hHhccCCEEEECCC
Confidence            699999999999999998 7777774 45888887543 2221 112111  112221   2243 55899999999754

>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*

Probab=95.50  E-value=0.048  Score=54.18  Aligned_cols=67  Identities=13%  Similarity=0.201  Sum_probs=44.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC------CCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN------PLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~------~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      +||+|||. |.+|.+++..|...      |+  ++++.+...  ....+.+..-......      ..+..+++++||+|
T Consensus        55 KkIgIIGl-GsMG~AmA~nLr~s~~~~g~G~--~ViVg~r~~sks~e~A~e~G~~v~d~t------a~s~aEAa~~ADVV  125 (525)
T 3fr7_A           55 KQIGVIGW-GSQGPAQAQNLRDSLAEAKSDI--VVKIGLRKGSKSFDEARAAGFTEESGT------LGDIWETVSGSDLV  125 (525)
T ss_dssp             SEEEEECC-TTHHHHHHHHHHHHHHHTTCCC--EEEEEECTTCSCHHHHHHTTCCTTTTC------EEEHHHHHHHCSEE
T ss_pred             CEEEEEeE-hHHHHHHHHHHHhcccccCCCC--EEEEEeCCchhhHHHHHHCCCEEecCC------CCCHHHHHhcCCEE
Confidence            59999998 99999999999887      77  766555443  3333332211100000      02457899999999


Q ss_pred             EEcC
Q 018618          114 IIPA  117 (353)
Q Consensus       114 Ii~a  117 (353)
                      |++.
T Consensus       126 ILaV  129 (525)
T 3fr7_A          126 LLLI  129 (525)
T ss_dssp             EECS
T ss_pred             EECC
Confidence            9984

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=95.50  E-value=0.021  Score=52.61  Aligned_cols=153  Identities=16%  Similarity=0.130  Sum_probs=88.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCc---h-------hhhhCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ---L-------ENALTGM  110 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d---~-------~~al~~A  110 (353)
                      .+.|+||++-+|..+|..|++.|.  .|++.|+++  ++..+.++....  ..+.  ..-+|   .       .+.+-.-
T Consensus        31 valVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~g~~~--~~~~--~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           31 IAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEIGGGA--VGIQ--ADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             EEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCTTC--EEEE--CCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCCCe--EEEE--ecCCCHHHHHHHHHHHHHHcCCC
Confidence            567789989999999999999998  999999976  333444443211  0111  11112   1       2334578


Q ss_pred             cEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          111 DLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       111 DiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      |++|..||.... +  ..+   ....+..|+.....+++....+= ..+.||+++.-...            .+.|..-.
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~------------~~~~~~~~  172 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS------------TGTPAFSV  172 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG------------SCCTTCHH
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc------------cCCCCchH
Confidence            999999886432 1  122   34456677777666666554432 34566666532211            12333233


Q ss_pred             EeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          184 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ++.+.-....|-+.+|..++  +..|++-.+-
T Consensus       173 Y~asKaav~~ltr~lA~Ela--~~gIrVN~V~  202 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLK--DRGIRINTLS  202 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT--TSCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHhc--ccCeEEEEEe
Confidence            44443334456788888875  5666554444

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.49  E-value=0.019  Score=55.55  Aligned_cols=66  Identities=18%  Similarity=0.227  Sum_probs=48.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..++|+|||. |.+|+.+|..+...|.  +|+.+|.+. ......++.       +..   ..++++.++.||+|++...
T Consensus       190 ~gktvGIIGl-G~IG~~vA~~l~a~G~--~V~~~d~~~~~~~~~~~~G-------~~~---~~~l~ell~~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVAA-GRIGLAVLRRLAPFDV--HLHYTDRHRLPESVEKELN-------LTW---HATREDMYPVCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTC--EEEEECSSCCCHHHHHHHT-------CEE---CSSHHHHGGGCSEEEECSC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHhCCC--EEEEEcCCccchhhHhhcC-------cee---cCCHHHHHhcCCEEEEecC
Confidence            4569999999 9999999999987776  899999875 222222221       111   1356788999999999853

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.48  E-value=0.018  Score=55.23  Aligned_cols=97  Identities=21%  Similarity=0.333  Sum_probs=62.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|||. |.+|+.+|..+..-|.  +|..+|.......+.+.   .    +..    .++++.++.||+|++.....
T Consensus       176 gktvGIIGl-G~IG~~vA~~l~~fG~--~V~~~d~~~~~~~~~~~---g----~~~----~~l~ell~~aDvV~l~~Plt  241 (365)
T 4hy3_A          176 GSEIGIVGF-GDLGKALRRVLSGFRA--RIRVFDPWLPRSMLEEN---G----VEP----ASLEDVLTKSDFIFVVAAVT  241 (365)
T ss_dssp             SSEEEEECC-SHHHHHHHHHHTTSCC--EEEEECSSSCHHHHHHT---T----CEE----CCHHHHHHSCSEEEECSCSS
T ss_pred             CCEEEEecC-CcccHHHHHhhhhCCC--EEEEECCCCCHHHHhhc---C----eee----CCHHHHHhcCCEEEEcCcCC
Confidence            469999999 9999999999887777  99999987532222211   1    111    35788999999999974221


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                        +. ++ .++  |       .+.+....|++++|+++  .++|.-
T Consensus       242 --~~-T~-~li--~-------~~~l~~mk~gailIN~aRG~~vde~  274 (365)
T 4hy3_A          242 --SE-NK-RFL--G-------AEAFSSMRRGAAFILLSRADVVDFD  274 (365)
T ss_dssp             --CC-----CC--C-------HHHHHTSCTTCEEEECSCGGGSCHH
T ss_pred             --HH-HH-hhc--C-------HHHHhcCCCCcEEEECcCCchhCHH
Confidence              11 11 000  1       12234445889999987  556644

>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*

Probab=95.48  E-value=0.014  Score=58.76  Aligned_cols=65  Identities=23%  Similarity=0.323  Sum_probs=48.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..++|+|||. |.+|+.+|..|...|.  +|+.+|++.....+.++.       +..    .++++.+++||+|+++..
T Consensus       141 ~g~~vgIIG~-G~IG~~vA~~l~~~G~--~V~~~d~~~~~~~a~~~g-------~~~----~~l~e~~~~aDvV~l~~P  205 (529)
T 1ygy_A          141 FGKTVGVVGL-GRIGQLVAQRIAAFGA--YVVAYDPYVSPARAAQLG-------IEL----LSLDDLLARADFISVHLP  205 (529)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCHHHHHHHT-------CEE----CCHHHHHHHCSEEEECCC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCC--EEEEECCCCChhHHHhcC-------cEE----cCHHHHHhcCCEEEECCC
Confidence            3479999999 9999999999998887  999999876332232221       111    146788999999999853

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=95.44  E-value=0.054  Score=53.19  Aligned_cols=91  Identities=18%  Similarity=0.155  Sum_probs=60.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ..++|+|+|. |.||..+|..+...|.  +|+.+|+++...... ..+ .    +..    .+++++++.||+|+.+.|.
T Consensus       246 ~GKTVgVIG~-G~IGr~vA~~lrafGa--~Viv~d~dp~~a~~A-~~~-G----~~v----v~LeElL~~ADIVv~atgt  312 (464)
T 3n58_A          246 AGKVAVVCGY-GDVGKGSAQSLAGAGA--RVKVTEVDPICALQA-AMD-G----FEV----VTLDDAASTADIVVTTTGN  312 (464)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHHHH-HHT-T----CEE----CCHHHHGGGCSEEEECCSS
T ss_pred             cCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEEeCCcchhhHH-Hhc-C----cee----ccHHHHHhhCCEEEECCCC
Confidence            3468999999 9999999999987777  999999876221111 111 1    111    2467899999999987543


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      .   +.-           -.+   .+...-|++++++++..
T Consensus       313 ~---~lI-----------~~e---~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          313 K---DVI-----------TID---HMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             S---SSB-----------CHH---HHHHSCTTEEEEECSSS
T ss_pred             c---ccc-----------CHH---HHhcCCCCeEEEEcCCC
Confidence            2   110           012   22333478999998854

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=95.43  E-value=0.034  Score=53.30  Aligned_cols=71  Identities=21%  Similarity=0.479  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||+|+||+|++|..+...|...++ ..+|.++......|....+.    ...+...  ..+ .+++.++|+|+.+.|
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~----~~~~~~~--~~~-~~~~~~~Dvvf~a~~   73 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK----DQDITIE--ETT-ETAFEGVDIALFSAG   73 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEET----TEEEEEE--ECC-TTTTTTCSEEEECSC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceec----CCCceEe--eCC-HHHhcCCCEEEECCC
Confidence            36999999999999999998888743 45888887644322222111    1223322  122 245789999999764

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=95.43  E-value=0.18  Score=45.70  Aligned_cols=154  Identities=14%  Similarity=0.083  Sum_probs=85.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEE-eCCCc----------hhhhhCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGF-LGQPQ----------LENALTG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~-~~t~d----------~~~al~~  109 (353)
                      +.+.|+||++-+|..++..|++.|.  .+++.|+++ ....+..+....  .+...+ ..-+|          ..+.+-.
T Consensus         8 KvalVTGas~GIG~aia~~la~~Ga--~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            8 KVVIVTGGASGIGGAISMRLAEERA--IPVVFARHAPDGAFLDALAQRQ--PRATYLPVELQDDAQCRDAVAQTIATFGR   83 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCCHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCcccHHHHHHHHhcC--CCEEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4678889999999999999999998  899999877 222222222211  111111 01112          1233467


Q ss_pred             CcEEEEcCCCCCCCC--CCHH---HHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          110 MDLVIIPAGVPRKPG--MTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       110 ADiVIi~ag~~~~~g--~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      -|++|..||......  .+..   ..+..|+.    ..+...+.+++.  .+.||+++.-..          ..  +.|.
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~----------~~--~~~~  149 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTA----------VT--GQGN  149 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHH----------HH--CCSS
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhh----------cc--CCCC
Confidence            899999998754332  2332   33455544    345555555543  366777654221          01  2333


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .-.++.+.-....|-+.+|..++  +..|++-.+-
T Consensus       150 ~~~Y~asKaav~~ltr~lA~ela--~~gIrVN~V~  182 (258)
T 4gkb_A          150 TSGYCASKGAQLALTREWAVALR--EHGVRVNAVI  182 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHhc--ccCeEEEEEe
Confidence            33344443334456777888774  4555444443

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=95.41  E-value=0.022  Score=54.46  Aligned_cols=76  Identities=24%  Similarity=0.261  Sum_probs=51.3

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHH-HHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEE
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPG-VTADISHMDTGAVVRG-FLGQPQLENALTGMDLVII  115 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~-~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi  115 (353)
                      +.++++|+|+|+ |.+|..++..+...|.  +|+++|+++.+. .+.+.  ..  ..+.. .....++++.++++|+||.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~--~g--~~~~~~~~~~~~l~~~~~~~DvVi~  235 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDV--FG--GRVITLTATEANIKKSVQHADLLIG  235 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--TT--TSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHh--cC--ceEEEecCCHHHHHHHHhCCCEEEE
Confidence            345689999999 9999999999998887  899999876221 11111  11  12211 1122456678899999999


Q ss_pred             cCCCC
Q 018618          116 PAGVP  120 (353)
Q Consensus       116 ~ag~~  120 (353)
                      +++.+
T Consensus       236 ~~g~~  240 (369)
T 2eez_A          236 AVLVP  240 (369)
T ss_dssp             CCC--
T ss_pred             CCCCC
Confidence            98755

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=95.39  E-value=0.025  Score=53.64  Aligned_cols=99  Identities=16%  Similarity=0.200  Sum_probs=56.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcC--CCCCeEEEEeCCCchhhhh-CCCcEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHM--DTGAVVRGFLGQPQLENAL-TGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al-~~ADiVI  114 (353)
                      ++||+|+||+|.+|..+...|...+.+ ++..+....   ..|....-.+.  .....+.... ..+. +++ .++|+|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~-el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~-~~~~-~~~~~~~Dvvf   80 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHM-NITALTVSAQSNDAGKLISDLHPQLKGIVELPLQP-MSDI-SEFSPGVDVVF   80 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTE-EEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEE-ESSG-GGTCTTCSEEE
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCC-cEEEEEecCchhhcCCchHHhCccccCccceeEec-cCCH-HHHhcCCCEEE
Confidence            569999999999999999988886544 777665433   22322211111  1011222210 0033 445 8999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      .+.+                -...+++++.+.+.  .+++|-.|.+
T Consensus        81 ~a~p----------------~~~s~~~~~~~~~~--g~~vIDlSa~  108 (337)
T 3dr3_A           81 LATA----------------HEVSHDLAPQFLEA--GCVVFDLSGA  108 (337)
T ss_dssp             ECSC----------------HHHHHHHHHHHHHT--TCEEEECSST
T ss_pred             ECCC----------------hHHHHHHHHHHHHC--CCEEEEcCCc
Confidence            9853                11234555554433  5667777766

>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A

Probab=95.38  E-value=0.036  Score=52.10  Aligned_cols=70  Identities=11%  Similarity=0.075  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+|+|||+ |.+|...+..|.......+|.++|++.  ++..+.++....  ..+. .   +++++++ ++|+|+++..
T Consensus       125 ~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~~~--~~~~-~---~~~~e~v-~aDvVi~aTp  196 (322)
T 1omo_A          125 SSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG--ISAS-V---QPAEEAS-RCDVLVTTTP  196 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT--CCEE-E---CCHHHHT-SSSEEEECCC
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhcC--ceEE-E---CCHHHHh-CCCEEEEeeC
Confidence            459999999 999999988877633346999999976  333444443211  1233 2   4678889 9999999753

>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}

Probab=95.38  E-value=0.027  Score=52.80  Aligned_cols=72  Identities=17%  Similarity=0.219  Sum_probs=51.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..+|+|||+ |.+|...+..|.......+|.++|++.+...+.++.... ...+..   . ++++++++||+||.+..
T Consensus       121 ~~~v~iIGa-G~~a~~~~~al~~~~~~~~V~v~~r~~a~~la~~l~~~~-g~~~~~---~-~~~eav~~aDIVi~aT~  192 (313)
T 3hdj_A          121 SSVLGLFGA-GTQGAEHAAQLSARFALEAILVHDPYASPEILERIGRRC-GVPARM---A-APADIAAQADIVVTATR  192 (313)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECTTCCHHHHHHHHHHH-TSCEEE---C-CHHHHHHHCSEEEECCC
T ss_pred             CcEEEEECc-cHHHHHHHHHHHHhCCCcEEEEECCcHHHHHHHHHHHhc-CCeEEE---e-CHHHHHhhCCEEEEccC
Confidence            348999999 999999988777643356999999985444555554211 123332   2 67899999999999754

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=95.38  E-value=0.013  Score=54.73  Aligned_cols=61  Identities=23%  Similarity=0.236  Sum_probs=46.6

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      -..++|+|||. |.+|+.+|..+...|.  +|+.+|++.. .      . ..    .   ...++++.++.||+|++..
T Consensus       122 l~g~~vgIIG~-G~IG~~~A~~l~~~G~--~V~~~dr~~~-~------~-~~----~---~~~~l~ell~~aDvV~l~~  182 (303)
T 1qp8_A          122 IQGEKVAVLGL-GEIGTRVGKILAALGA--QVRGFSRTPK-E------G-PW----R---FTNSLEEALREARAAVCAL  182 (303)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTC--EEEEECSSCC-C------S-SS----C---CBSCSHHHHTTCSEEEECC
T ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCcc-c------c-Cc----c---cCCCHHHHHhhCCEEEEeC
Confidence            34579999999 9999999999988887  8999998653 0      0 10    0   1135678899999999985

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.32  E-value=0.032  Score=51.24  Aligned_cols=150  Identities=16%  Similarity=0.139  Sum_probs=81.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEE-EEeCCCcHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKIN-PLVSVLH-LYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~-L~D~~~~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      ++|||+|+|++|.+|+.++..+.+. ++  +|+ .+|.+.......|+.....  ...+..   ++|+++.++++|+||.
T Consensus         4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~--elva~~d~~~~~~~g~d~~~~~g~~~~~v~~---~~dl~~~l~~~DvVID   78 (273)
T 1dih_A            4 ANIRVAIAGAGGRMGRQLIQAALALEGV--QLGAALEREGSSLLGSDAGELAGAGKTGVTV---QSSLDAVKDDFDVFID   78 (273)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTE--ECCCEECCTTCTTCSCCTTCSSSSSCCSCCE---ESCSTTTTTSCSEEEE
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHhCCCC--EEEEEEecCchhhhhhhHHHHcCCCcCCcee---cCCHHHHhcCCCEEEE
Confidence            4579999999999999999887755 44  665 7887641100112221110  012222   2466777889999995


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec-hh---hH
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT-ML---DV  191 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t-~l---d~  191 (353)
                      .+. |               ....++++.+.+.+.+   ++++.|- ....-. +.+..+..- .-.+++.. .+   --
T Consensus        79 ft~-p---------------~~~~~~~~~a~~~G~~---vVigTtG-~~~e~~-~~L~~~a~~-~~vv~a~N~siGvn~~  136 (273)
T 1dih_A           79 FTR-P---------------EGTLNHLAFCRQHGKG---MVIGTTG-FDEAGK-QAIRDAAAD-IAIVFAANFSVGVNVM  136 (273)
T ss_dssp             CSC-H---------------HHHHHHHHHHHHTTCE---EEECCCC-CCHHHH-HHHHHHTTT-SCEEECSCCCHHHHHH
T ss_pred             cCC-h---------------HHHHHHHHHHHhCCCC---EEEECCC-CCHHHH-HHHHHhcCC-CCEEEEecCcHHHHHH
Confidence            431 1               1244555555555533   4455552 221111 222332211 11233221 11   12


Q ss_pred             HHHHHHHHHHhCCCCCCCcceEEeecCC
Q 018618          192 VRANTFVAEVLGLDPRDVDVPVVGGHAG  219 (353)
Q Consensus       192 ~R~~~~lA~~l~v~~~~v~~~viG~hg~  219 (353)
                      .++-...|+.|+   .+.++.|+--|+.
T Consensus       137 ~~l~~~aa~~~~---~~~dieiiE~Hh~  161 (273)
T 1dih_A          137 LKLLEKAAKVMG---DYTDIEIIEAHHR  161 (273)
T ss_dssp             HHHHHHHHHHHT---TTSEEEEEEEECT
T ss_pred             HHHHHHHHHhcC---CCCCEEEEEeecC
Confidence            356678888886   4667888888886

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=95.31  E-value=0.038  Score=52.62  Aligned_cols=74  Identities=16%  Similarity=0.166  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEE-eCCCcHHHHHHHhcCCC--------CCeEEEEeCCCchhhhhCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLY-DVVNTPGVTADISHMDT--------GAVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~-D~~~~~~~~~dl~~~~~--------~~~v~~~~~t~d~~~al~~AD  111 (353)
                      ++||+|+||+|.+|..++..|...+.+ +|+.+ |.+...+...+-.+...        ...+...  ..|. +++.++|
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~-elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~d~-~~~~~vD   79 (350)
T 2ep5_A            4 KIKVSLLGSTGMVGQKMVKMLAKHPYL-ELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIV--STNY-EDHKDVD   79 (350)
T ss_dssp             CEEEEEESCSSHHHHHHHHHHTTCSSE-EEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEE--CSSG-GGGTTCS
T ss_pred             CcEEEEECcCCHHHHHHHHHHHhCCCc-EEEEEecChhhcCCCHHHhcCcccccccccCCceeEEe--eCCH-HHhcCCC
Confidence            469999998899999999988776543 77666 43321122122122110        0112221  1243 4468999


Q ss_pred             EEEEcCC
Q 018618          112 LVIIPAG  118 (353)
Q Consensus       112 iVIi~ag  118 (353)
                      +|+++.+
T Consensus        80 vVf~atp   86 (350)
T 2ep5_A           80 VVLSALP   86 (350)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999753

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=95.28  E-value=0.027  Score=50.16  Aligned_cols=56  Identities=25%  Similarity=0.375  Sum_probs=42.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEE-EEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh-CCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVL-HLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL-TGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el-~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-~~ADiVIi~a  117 (353)
                      |||+|||+ |.+|..++..|...++  ++ .++|.++. .     ..        .+   +|+++.+ .++|+|+++.
T Consensus         1 m~vgiIG~-G~mG~~~~~~l~~~g~--~lv~v~d~~~~-~-----~~--------~~---~~~~~l~~~~~DvVv~~~   58 (236)
T 2dc1_A            1 MLVGLIGY-GAIGKFLAEWLERNGF--EIAAILDVRGE-H-----EK--------MV---RGIDEFLQREMDVAVEAA   58 (236)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEECSSCC-C-----TT--------EE---SSHHHHTTSCCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCC--EEEEEEecCcc-h-----hh--------hc---CCHHHHhcCCCCEEEECC
Confidence            69999999 9999999988886666  76 68897641 0     00        22   4677777 6999999985

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.25  E-value=0.029  Score=53.08  Aligned_cols=62  Identities=19%  Similarity=0.328  Sum_probs=46.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .++|+|||. |.+|+.+|..+...|.  +|+.+|.+.... ..++   .     . +  ..++++.+++||+|++..
T Consensus       146 g~~vgIiG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~-~~~~---~-----~-~--~~~l~ell~~aDvV~l~~  207 (333)
T 1j4a_A          146 DQVVGVVGT-GHIGQVFMQIMEGFGA--KVITYDIFRNPE-LEKK---G-----Y-Y--VDSLDDLYKQADVISLHV  207 (333)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHH-HHHT---T-----C-B--CSCHHHHHHHCSEEEECS
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHHCCC--EEEEECCCcchh-HHhh---C-----e-e--cCCHHHHHhhCCEEEEcC
Confidence            469999999 9999999999988887  999999876332 2111   1     1 1  125678899999999985

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.22  E-value=0.066  Score=49.52  Aligned_cols=97  Identities=22%  Similarity=0.270  Sum_probs=63.5

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ...++|+|+|+ |.+|..++..+...|.  +|..+|++..+.  ..+...  ....  .. ..++++.+++||+|+.+..
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~--~V~~~d~~~~~~--~~~~~~--g~~~--~~-~~~l~~~l~~aDvVi~~~p  224 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGA--NVKVGARSSAHL--ARITEM--GLVP--FH-TDELKEHVKDIDICINTIP  224 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSHHHH--HHHHHT--TCEE--EE-GGGHHHHSTTCSEEEECCS
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCC--EEEEEECCHHHH--HHHHHC--CCeE--Ec-hhhHHHHhhCCCEEEECCC
Confidence            45679999999 9999999999988887  999999865221  112221  1221  11 1467788999999999864


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCc
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNS  163 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~  163 (353)
                      .    ++-       |.    +   .+....|.+++++++ .|.+.
T Consensus       225 ~----~~i-------~~----~---~~~~mk~g~~lin~a~g~~~~  252 (300)
T 2rir_A          225 S----MIL-------NQ----T---VLSSMTPKTLILDLASRPGGT  252 (300)
T ss_dssp             S----CCB-------CH----H---HHTTSCTTCEEEECSSTTCSB
T ss_pred             h----hhh-------CH----H---HHHhCCCCCEEEEEeCCCCCc
Confidence            3    211       10    1   233344788888887 67654

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=95.22  E-value=0.09  Score=49.90  Aligned_cols=73  Identities=16%  Similarity=0.217  Sum_probs=49.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-------------------cHH--HHHHHhcCCCCCeEEEEeCC-
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-------------------TPG--VTADISHMDTGAVVRGFLGQ-  100 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-------------------~~~--~~~dl~~~~~~~~v~~~~~t-  100 (353)
                      ||+|+|+ |.+|+.++..|+..|. .+|.|+|.+.                   .++  .+..+........+..+... 
T Consensus        38 ~VlivG~-GGlG~~ia~~La~~Gv-g~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~~~~  115 (346)
T 1y8q_A           38 RVLLVGL-KGLGAEIAKNLILAGV-KGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDTEDI  115 (346)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTC-SEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEECSCG
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCC-CEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEeccc
Confidence            9999999 9999999999999886 4999999653                   112  22334443323445544211 


Q ss_pred             -CchhhhhCCCcEEEEcC
Q 018618          101 -PQLENALTGMDLVIIPA  117 (353)
Q Consensus       101 -~d~~~al~~ADiVIi~a  117 (353)
                       ....+.+++.|+||.+.
T Consensus       116 ~~~~~~~~~~~dvVv~~~  133 (346)
T 1y8q_A          116 EKKPESFFTQFDAVCLTC  133 (346)
T ss_dssp             GGCCHHHHTTCSEEEEES
T ss_pred             CcchHHHhcCCCEEEEcC
Confidence             11246679999999874

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=95.21  E-value=0.025  Score=53.40  Aligned_cols=96  Identities=20%  Similarity=0.245  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC-
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV-  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~-  119 (353)
                      .++|+|||. |.+|+.+|..+..-|.  +|..+|++....     ..   ......   ..++++.+++||+|++.... 
T Consensus       137 gktvGIiGl-G~IG~~vA~~l~~~G~--~V~~~dr~~~~~-----~~---~~~~~~---~~~l~ell~~aDvV~l~lPlt  202 (324)
T 3evt_A          137 GQQLLIYGT-GQIGQSLAAKASALGM--HVIGVNTTGHPA-----DH---FHETVA---FTATADALATANFIVNALPLT  202 (324)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSCCCC-----TT---CSEEEE---GGGCHHHHHHCSEEEECCCCC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCC--EEEEECCCcchh-----Hh---Hhhccc---cCCHHHHHhhCCEEEEcCCCc
Confidence            469999999 9999999999998887  999999865210     00   011111   24677889999999997421 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                      +...++     +  |    .   +.+....|++++|+++  .++|.-
T Consensus       203 ~~t~~l-----i--~----~---~~l~~mk~gailIN~aRG~~vd~~  235 (324)
T 3evt_A          203 PTTHHL-----F--S----T---ELFQQTKQQPMLINIGRGPAVDTT  235 (324)
T ss_dssp             GGGTTC-----B--S----H---HHHHTCCSCCEEEECSCGGGBCHH
T ss_pred             hHHHHh-----c--C----H---HHHhcCCCCCEEEEcCCChhhhHH
Confidence            111111     0  1    1   2233345789999987  445533

>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1

Probab=95.20  E-value=0.068  Score=49.16  Aligned_cols=34  Identities=15%  Similarity=0.162  Sum_probs=30.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .++|.|+|+ |.+|...+..|+..|.  +|+++|.+.
T Consensus        13 ~k~VLVVGg-G~va~rka~~Ll~~Ga--~VtViap~~   46 (274)
T 1kyq_A           13 DKRILLIGG-GEVGLTRLYKLMPTGC--KLTLVSPDL   46 (274)
T ss_dssp             TCEEEEEEE-SHHHHHHHHHHGGGTC--EEEEEEEEE
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCC--EEEEEcCCC
Confidence            359999999 9999999999999997  899999754

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.18  E-value=0.033  Score=52.32  Aligned_cols=65  Identities=22%  Similarity=0.238  Sum_probs=48.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC-CCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV-VNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~-~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||. |.+|..++..+...|.  +|+.+|+ +.....+.++.     .  ..   ..++++.+++||+|++..
T Consensus       145 ~g~~vgIIG~-G~IG~~~A~~l~~~G~--~V~~~d~~~~~~~~~~~~g-----~--~~---~~~l~ell~~aDvVil~~  210 (320)
T 1gdh_A          145 DNKTLGIYGF-GSIGQALAKRAQGFDM--DIDYFDTHRASSSDEASYQ-----A--TF---HDSLDSLLSVSQFFSLNA  210 (320)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSCCCHHHHHHHT-----C--EE---CSSHHHHHHHCSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHCCC--EEEEECCCCcChhhhhhcC-----c--EE---cCCHHHHHhhCCEEEEec
Confidence            4569999999 9999999999987776  9999998 76332222221     1  11   135778899999999985

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=95.18  E-value=0.015  Score=51.61  Aligned_cols=97  Identities=19%  Similarity=0.123  Sum_probs=57.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCc---hhhh-hCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ---LENA-LTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d---~~~a-l~~ADiVIi~  116 (353)
                      .++|.|+|+ |.+|..++..|...|.   ++++|.++....  .+. ... ..+.+  ..+|   ++++ +++||.||++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~---v~vid~~~~~~~--~~~-~~~-~~i~g--d~~~~~~l~~a~i~~ad~vi~~   78 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV---FVLAEDENVRKK--VLR-SGA-NFVHG--DPTRVSDLEKANVRGARAVIVD   78 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE---EEEESCGGGHHH--HHH-TTC-EEEES--CTTCHHHHHHTTCTTCSEEEEC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe---EEEEECCHHHHH--HHh-cCC-eEEEc--CCCCHHHHHhcCcchhcEEEEc
Confidence            458999999 9999999999987764   889998763221  222 111 11211  1123   2233 7899999997


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEE-EEecCCCC
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV-NLISNPVN  162 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v-iv~tNPv~  162 (353)
                      .+.         +  ..|..    ++..+++.+|+..+ .-+.+|-+
T Consensus        79 ~~~---------d--~~n~~----~~~~a~~~~~~~~iia~~~~~~~  110 (234)
T 2aef_A           79 LES---------D--SETIH----CILGIRKIDESVRIIAEAERYEN  110 (234)
T ss_dssp             CSC---------H--HHHHH----HHHHHHHHCSSSEEEEECSSGGG
T ss_pred             CCC---------c--HHHHH----HHHHHHHHCCCCeEEEEECCHhH
Confidence            531         1  33333    34455667787444 44557654

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.18  E-value=0.089  Score=50.64  Aligned_cols=118  Identities=17%  Similarity=0.191  Sum_probs=74.5

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----cH-----HHHHHHhcCCCCCeEEEEeCCCchhhhh
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TP-----GVTADISHMDTGAVVRGFLGQPQLENAL  107 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~~-----~~~~dl~~~~~~~~v~~~~~t~d~~~al  107 (353)
                      ..+..||+|+|| |.+|..++..|...|. .+|+++|++.     ..     .....+.+.. ..    .....++++++
T Consensus       189 ~l~~~kVVv~GA-GaAG~~iAkll~~~G~-~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~-~~----~~~~~~L~eav  261 (388)
T 1vl6_A          189 KIEEVKVVVNGI-GAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARIT-NP----ERLSGDLETAL  261 (388)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHTS-CT----TCCCSCHHHHH
T ss_pred             CCCCcEEEEECC-CHHHHHHHHHHHhCCC-CeEEEEECCCcccCCCcccccCHHHHHHHHhh-hc----cCchhhHHHHH
Confidence            456789999999 9999999998888774 5899999972     11     1112232221 11    11235789999


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      ++||++|=+.+ |   +.-           .+++.+.|.   ++.+|+=.+||.--.++-   -.++. |   ..++++.
T Consensus       262 ~~ADVlIG~Sa-p---~l~-----------t~emVk~Ma---~~pIIfalSNPt~E~~p~---~a~~~-g---~~i~atG  316 (388)
T 1vl6_A          262 EGADFFIGVSR-G---NIL-----------KPEWIKKMS---RKPVIFALANPVPEIDPE---LAREA-G---AFIVATG  316 (388)
T ss_dssp             TTCSEEEECSC-S---SCS-----------CHHHHTTSC---SSCEEEECCSSSCSSCHH---HHHHT-T---CSEEEES
T ss_pred             ccCCEEEEeCC-C---Ccc-----------CHHHHHhcC---CCCEEEEcCCCCCCCCHH---HHHHh-c---CeEEEeC
Confidence            99999888754 3   321           123444433   567887789998666542   22332 2   3677663

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=95.15  E-value=0.035  Score=53.36  Aligned_cols=78  Identities=23%  Similarity=0.196  Sum_probs=52.9

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +.+..+|+|+|+ |.+|..++..+...|.  +|+.+|++... ..+.+..  ....... .....++.+.++++|+||.+
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga--~V~~~d~~~~~l~~~~~~~--g~~~~~~-~~~~~~l~~~l~~aDvVi~~  238 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGA--TVTVLDINIDKLRQLDAEF--CGRIHTR-YSSAYELEGAVKRADLVIGA  238 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT--TTSSEEE-ECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhc--CCeeEec-cCCHHHHHHHHcCCCEEEEC
Confidence            456789999999 9999999999998887  89999987622 1222211  1111111 11123566778899999998


Q ss_pred             CCCCC
Q 018618          117 AGVPR  121 (353)
Q Consensus       117 ag~~~  121 (353)
                      .+.|.
T Consensus       239 ~~~p~  243 (377)
T 2vhw_A          239 VLVPG  243 (377)
T ss_dssp             CCCTT
T ss_pred             CCcCC
Confidence            87664

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=95.11  E-value=0.047  Score=52.18  Aligned_cols=72  Identities=17%  Similarity=0.275  Sum_probs=44.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHH-HHh----cCCC-----CCeEEEEeCCCchhhhhCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DIS----HMDT-----GAVVRGFLGQPQLENALTGM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~-dl~----~~~~-----~~~v~~~~~t~d~~~al~~A  110 (353)
                      ++||+|+||+|++|..+...|...+.. ||..+......|... +.-    +...     ...+..    .+. +.+.++
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~-el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~----~~~-~~~~~v   80 (359)
T 4dpl_A            7 TLKAAILGATGLVGIEYVRMLSNHPYI-KPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKP----TDP-KLMDDV   80 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSE-EEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEE----CCG-GGCTTC
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCc-eEEEEECchhcCCChhHhcccccccccccccccceEEe----CCH-HHhcCC
Confidence            469999999999999999988776644 777776544323221 110    1000     112222    232 457899


Q ss_pred             cEEEEcCC
Q 018618          111 DLVIIPAG  118 (353)
Q Consensus       111 DiVIi~ag  118 (353)
                      |+|+.+.+
T Consensus        81 Dvvf~a~p   88 (359)
T 4dpl_A           81 DIIFSPLP   88 (359)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999854

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=95.11  E-value=0.047  Score=52.18  Aligned_cols=72  Identities=17%  Similarity=0.275  Sum_probs=44.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHH-HHh----cCCC-----CCeEEEEeCCCchhhhhCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DIS----HMDT-----GAVVRGFLGQPQLENALTGM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~-dl~----~~~~-----~~~v~~~~~t~d~~~al~~A  110 (353)
                      ++||+|+||+|++|..+...|...+.. ||..+......|... +.-    +...     ...+..    .+. +.+.++
T Consensus         7 ~~kVaIvGATGyvG~eLlrlL~~hP~~-el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~----~~~-~~~~~v   80 (359)
T 4dpk_A            7 TLKAAILGATGLVGIEYVRMLSNHPYI-KPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKP----TDP-KLMDDV   80 (359)
T ss_dssp             CEEEEETTTTSTTHHHHHHHHTTCSSE-EEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEE----CCG-GGCTTC
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCc-eEEEEECchhcCCChhHhcccccccccccccccceEEe----CCH-HHhcCC
Confidence            469999999999999999988776644 777776544323221 110    1000     112222    232 457899


Q ss_pred             cEEEEcCC
Q 018618          111 DLVIIPAG  118 (353)
Q Consensus       111 DiVIi~ag  118 (353)
                      |+|+.+.+
T Consensus        81 Dvvf~a~p   88 (359)
T 4dpk_A           81 DIIFSPLP   88 (359)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999854

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.08  E-value=0.02  Score=54.86  Aligned_cols=65  Identities=23%  Similarity=0.308  Sum_probs=47.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcE-EEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSV-LHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~e-l~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|+|||. |.+|+.+|..+...|.  + |+.+|++. ....+.++   .    +..   ..++++.++.||+|++..
T Consensus       163 ~g~tvgIIG~-G~IG~~vA~~l~~~G~--~~V~~~d~~~~~~~~~~~~---g----~~~---~~~l~ell~~aDvV~l~~  229 (364)
T 2j6i_A          163 EGKTIATIGA-GRIGYRVLERLVPFNP--KELLYYDYQALPKDAEEKV---G----ARR---VENIEELVAQADIVTVNA  229 (364)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGCC--SEEEEECSSCCCHHHHHHT---T----EEE---CSSHHHHHHTCSEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhCCC--cEEEEECCCccchhHHHhc---C----cEe---cCCHHHHHhcCCEEEECC
Confidence            4569999999 9999999999987775  6 99999865 22222111   1    121   135778899999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	353
d1mlda2	169	d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (S	2e-49
d2cmda2	167	d.162.1.1 (A:146-312) Malate dehydrogenase {Escher	2e-48
d1mlda1	144	c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus s	1e-42
d2cmda1	145	c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichi	3e-35
d1guza2	163	d.162.1.1 (A:143-305) Malate dehydrogenase {Chloro	4e-31
d7mdha1	175	c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (	6e-31
d1ojua1	142	c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon	1e-29
d1y7ta1	154	c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus th	3e-29
d1y6ja1	142	c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridi	4e-29
d1a5za1	140	c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermoto	6e-29
d1uxja2	164	d.162.1.1 (A:144-307) Malate dehydrogenase {Chloro	9e-29
d1llda1	143	c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobac	9e-29
d1o6za1	142	c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon	1e-28
d5mdha1	154	c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus s	2e-28
d1guza1	142	c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium	2e-28
d1uxja1	142	c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflex	4e-28
d1t2da1	150	c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria p	9e-27
d5mdha2	179	d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (S	1e-25
d1ez4a1	146	c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobac	7e-25
d1ldma2	169	d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfi	1e-24
d1pzga1	154	c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplas	3e-24
d1ldna1	148	c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus	6e-24
d2ldxa1	159	c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mu	7e-24
d1llca2	172	d.162.1.1 (A:165-334) Lactate dehydrogenase {Lacto	1e-23
d1o6za2	161	d.162.1.1 (A:163-330) Malate dehydrogenase {Archae	3e-23
d1llda2	170	d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifid	4e-23
d1ez4a2	171	d.162.1.1 (A:163-334) Lactate dehydrogenase {Lacto	5e-23
d1i0za1	160	c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Ho	5e-23
d2ldxa2	172	d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse	7e-23
d1a5za2	172	d.162.1.1 (A:164-333) Lactate dehydrogenase {Therm	8e-23
d1hyea2	168	d.162.1.1 (A:146-313) MJ0490, lactate/malate dehyd	8e-23
d1hyha2	163	d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehy	1e-22
d1ldna2	168	d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacil	1e-22
d1hyea1	145	c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydroge	2e-22
d1i0za2	172	d.162.1.1 (A:161-332) Lactate dehydrogenase {Human	3e-22
d1hyha1	146	c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydro	5e-22
d1y6ja2	169	d.162.1.1 (A:149-317) Lactate dehydrogenase {Clost	2e-21
d1t2da2	165	d.162.1.1 (A:151-315) Lactate dehydrogenase {Malar	3e-21
d7mdha2	188	d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghu	8e-20
d1y7ta2	173	d.162.1.1 (A:154-332) Malate dehydrogenase {Thermu	3e-19
d1pzga2	174	d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxop	4e-19
d1up7a1	162	c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Ther	9e-19
d1b8pa2	171	d.162.1.1 (A:159-329) Malate dehydrogenase {Aquasp	2e-18
d1s6ya1	169	c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Baci	2e-16
d1u8xx1	167	c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase	2e-16
d1obba1	171	c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermoto	4e-14
d1ojua2	152	d.162.1.1 (A:164-331) Lactate dehydrogenase {Archa	9e-13

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  161 bits (408), Expect = 2e-49
 Identities = 88/167 (52%), Positives = 116/167 (69%)

Query: 186 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN 245
           VT LD+VRAN FVAE+ GLDP  V VPV+GGHAG TI+PL+SQ  P   F Q++   LT 
Sbjct: 1   VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTG 60

Query: 246 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFF 305
           RIQ  GTEVV+AKAGAGSATLSMAYA  +F  + +  + G  GVVEC+FV SQ T+ P+F
Sbjct: 61  RIQEAGTEVVKAKAGAGSATLSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYF 120

Query: 306 ASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSK 352
           ++ + LG++G E+   +G ++ +E   + +A  EL  SI+KG  F K
Sbjct: 121 STPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIKKGEEFVK 167

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 167

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  158 bits (401), Expect = 2e-48
 Identities = 87/168 (51%), Positives = 110/168 (65%), Gaps = 1/168 (0%)

Query: 186 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTN 245
           VT LD++R+NTFVAE+ G  P +V+VPV+GGH+GVTILPLLSQV     FT++E   LT 
Sbjct: 1   VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVS-FTEQEVADLTK 59

Query: 246 RIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFF 305
           RIQN GTEVVEAKAG GSATLSM  AA +F  + +R L+G+ GVVECA+V        FF
Sbjct: 60  RIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFF 119

Query: 306 ASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISFSKK 353
           +  + LG+ G EE   +G L+ +E+  LE     L   I  G  F  K
Sbjct: 120 SQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIALGQEFVNK 167

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 144

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  143 bits (361), Expect = 1e-42
 Identities = 92/143 (64%), Positives = 115/143 (80%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVA+LGA+GGIGQPL++L+K +PLVS L LYD+ +TPGV AD+SH++T A V+G+LG  Q
Sbjct: 2   KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQ 61

Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
           L + L G D+V+IPAGVPRKPGMTRDDLFN NA IV TL    A+ CP+A + +ISNPVN
Sbjct: 62  LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVN 121

Query: 163 STVPIAAEVFKKAGTYDPKKLLG 185
           ST+PI AEVFKK G Y+P K+ G
Sbjct: 122 STIPITAEVFKKHGVYNPNKIFG 144

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  123 bits (310), Expect = 3e-35
 Identities = 84/145 (57%), Positives = 103/145 (71%), Gaps = 3/145 (2%)

Query: 43  KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ 100
           KVA+LGAAGGIGQ LA+L+K   P  S L LYD+   TPGV  D+SH+ T   ++GF G+
Sbjct: 2   KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGE 61

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
                AL G D+V+I AGV RKPGM R DLFN+NAGIV+ L + +AK CP A + +I+NP
Sbjct: 62  -DATPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNP 120

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLG 185
           VN+TV IAAEV KKAG YD  KL G
Sbjct: 121 VNTTVAIAAEVLKKAGVYDKNKLFG 145

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score =  113 bits (283), Expect = 4e-31
 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 7/163 (4%)

Query: 188 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS----FTQEETEYL 243
           +LD  R  +F+A  LG+  +D++  V+GGH    +  +                E  + L
Sbjct: 3   VLDAARFRSFIAMELGVSMQDINACVLGGHGDAMVPVVKYTTVAGIPISDLLPAETIDKL 62

Query: 244 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELP 303
             R +NGG E+VE     GSA  + A + V+  ++     R                +  
Sbjct: 63  VERTRNGGAEIVEH-LKQGSAFYAPASSVVEMVESI-VLDRKRVLPCAVGLEGQYGIDKT 120

Query: 304 FFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
           F    V+LGR G E+I+++  L++ +   L+K+ K +  + + 
Sbjct: 121 FVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIVDENCKM 162

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score =  113 bits (284), Expect = 6e-31
 Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 9/137 (6%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVNTPGVTADISHMDTGA---VV 94
            +A+ GAAG I   L   +    +        L L     +      ++     +   ++
Sbjct: 26  NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLL 85

Query: 95  RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAT 153
           R              +D  ++    PR PGM R  L +IN  I     + +      N  
Sbjct: 86  REVSIGIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVK 145

Query: 154 VNLISNPVNSTVPIAAE 170
           V ++ NP N+   I  +
Sbjct: 146 VLVVGNPCNTNALICLK 162

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score =  108 bits (271), Expect = 1e-29
 Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 7/146 (4%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           K+  +GA G +G   A    +N  V  + L D+      G   D++H   G      +  
Sbjct: 2   KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG 60

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
               + L G +++++ AG+ RKPGMTR DL + NAGI++ + + I +  P + + +++NP
Sbjct: 61  GADYSLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNP 120

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLGV 186
           ++    I      K       ++ G+
Sbjct: 121 MDVMTYIM----WKESGKPRNEVFGM 142

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  108 bits (270), Expect = 3e-29
 Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 12/149 (8%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVS--------VLHLYDVVNTPGVTADISHMDTGAVV 94
           +VA+ GAAG IG  L   +    ++         +L +   +                ++
Sbjct: 6   RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL 65

Query: 95  RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAK-CCPNAT 153
            G       + A    D  ++    PRK GM R DL  +N  I       +A+    +  
Sbjct: 66  AGLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVK 125

Query: 154 VNLISNPVNSTVPIAAEVFKKAGTYDPKK 182
           V ++ NP N+   IA   +K A   +P+ 
Sbjct: 126 VLVVGNPANTNALIA---YKNAPGLNPRN 151

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score =  107 bits (269), Expect = 4e-29
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 5/143 (3%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KVAI+GA G +G   A  M +    + L L DV     +   +        +        
Sbjct: 3   KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG 61

Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
             + +   D++++ AG  RKPG TR DL   N  I + + + I K   +  + ++SNPV+
Sbjct: 62  DYSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVD 121

Query: 163 STVPIAAEVFKKAGTYDPKKLLG 185
               +     +K       K++G
Sbjct: 122 IITYMI----QKWSGLPVGKVIG 140

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 140

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  107 bits (267), Expect = 6e-29
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 5/143 (3%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           K+ I+G  G +G   A  + +      + L DV         +  +      R       
Sbjct: 2   KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG 60

Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
               L G D+VI+ AGVP+KPG TR  L   NA +++ +   ++K  P++ V +++NPV+
Sbjct: 61  DYADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVD 120

Query: 163 STVPIAAEVFKKAGTYDPKKLLG 185
               +    F K    DP+K+ G
Sbjct: 121 ----VLTYFFLKESGMDPRKVFG 139

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 164

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score =  107 bits (268), Expect = 9e-29
 Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 7/163 (4%)

Query: 188 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEY----L 243
           +LD  R  TF+A   G+  +DV   ++GGH    +             ++         +
Sbjct: 3   VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGDEMVPLPRFSTISGIPVSEFIAPDRLAQI 62

Query: 244 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELP 303
             R + GG E+V      GSA  + A A  +  +A L+  +    V         + ++ 
Sbjct: 63  VERTRKGGGEIVNLLKT-GSAYYAPAAATAQMVEAVLKDKKRVMPVAAYLTGQYGLNDIY 121

Query: 304 FFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
           F    V LG  G E+I +L PLNE E   L  + K +  ++  
Sbjct: 122 FG-VPVILGAGGVEKILEL-PLNEEEMALLNASAKAVRATLDT 162

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 143

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score =  106 bits (266), Expect = 9e-29
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+A++GA G +G  LA       +   + L D+          D+ H  +        G 
Sbjct: 3   KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS 61

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
              E      D+V+I AG  +KPG +R +L      I++ +   + K  PNA   LI+NP
Sbjct: 62  DDPE-ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNP 120

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLG 185
           V+    IA  V +K       ++ G
Sbjct: 121 VD----IATHVAQKLTGLPENQIFG 141

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score =  106 bits (265), Expect = 1e-28
 Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 10/147 (6%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDTGAVVRGFL 98
           KV+++GAAG +G      + +  +   +   D+ +    T G  AD +H    A      
Sbjct: 2   KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNH--GIAYDSNTR 59

Query: 99  GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158
            +        G D+V+I AG+PR+PG TR DL   NA I+  +   + +   +      S
Sbjct: 60  VRQGGYEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTS 119

Query: 159 NPVNSTVPIAAEVFKKAGTYDPKKLLG 185
           NPV+    +      +AG    ++++G
Sbjct: 120 NPVD----LLNRHLYEAGDRSREQVIG 142

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  105 bits (264), Expect = 2e-28
 Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 9/141 (6%)

Query: 43  KVAILGAAGGIGQPLAML-----MKINPLVSVLHLYDVVNTPGVTADISHMDTGAVV--- 94
           +V + GAAG I   L        +       +L L D+    GV   +        +   
Sbjct: 5   RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL 64

Query: 95  RGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATV 154
           +  +   + E A   +D+ I+   +PR+ GM R DL   N  I +     + K    +  
Sbjct: 65  KDVIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVK 124

Query: 155 NL-ISNPVNSTVPIAAEVFKK 174
            + + NP N+    A++    
Sbjct: 125 VIVVGNPANTNCLTASKSAPS 145

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

 Score =  105 bits (263), Expect = 2e-28
 Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 7/146 (4%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+ ++GA G +G   A  +    L   L L DVV     G   D+       +    +  
Sbjct: 2   KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG 60

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
                     D+VII AG+PRKPGMTR+DL   NAGIV+ + + I K   N  + ++SNP
Sbjct: 61  SNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNP 120

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLGV 186
           ++    +A            ++++G+
Sbjct: 121 LDIMTHVA----WVRSGLPKERVIGM 142

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Length = 142

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

 Score =  104 bits (261), Expect = 4e-28
 Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 6/144 (4%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQP 101
           K++I+GA G +G   A  +    L  ++ L  V   P G   D+            +   
Sbjct: 3   KISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT 61

Query: 102 QLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV 161
                    D++++ +G PRKPGM+R+DL  +NA I R      A   PNA + +++NP+
Sbjct: 62  NNYADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPL 121

Query: 162 NSTVPIAAEVFKKAGTYDPKKLLG 185
           ++   +AAEV      +  ++++G
Sbjct: 122 DAMTYLAAEVSG----FPKERVIG 141

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 150

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  101 bits (253), Expect = 9e-27
 Identities = 45/154 (29%), Positives = 72/154 (46%), Gaps = 11/154 (7%)

Query: 39  AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGF 97
           A   K+ ++G+ G IG  +A L+    L  V+    V N P G   D SH +  A     
Sbjct: 1   APKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK 59

Query: 98  LGQPQLENALTGMDLVIIPAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNA 152
           +      + L G D+VI+ AG  + PG +     RDDL  +N  I+  +   I K CPNA
Sbjct: 60  VSGSNTYDDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNA 119

Query: 153 TVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV 186
            + +++NPV+  V +      +       K++G+
Sbjct: 120 FIIVVTNPVDVMVQLL----HQHSGVPKNKIIGL 149

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} Length = 179

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 99.8 bits (248), Expect = 1e-25
 Identities = 33/176 (18%), Positives = 57/176 (32%), Gaps = 13/176 (7%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 246
           T LD  RA   +A  LG+   DV   ++ G+   T  P ++  K      +         
Sbjct: 1   TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSSTQYPDVNHAKVKLQAKEVGVYEAVKD 60

Query: 247 IQNGGTEVVEAKAGAG---------SATLSMAYAAVKFADACLRGLRGDAGVVECAFVAS 297
                 E +      G         S+ +S A A          G      V        
Sbjct: 61  DSWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGIISDG 120

Query: 298 Q---VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
               V +   ++  V +  +  + +  L P+N++ R  ++   KELA   +    F
Sbjct: 121 NSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSREKMDLTAKELAEEKETAFEF 175

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score = 96.2 bits (239), Expect = 7e-25
 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 5/143 (3%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           KV ++G  G +G   A  M    +     + DVV        +   D  A          
Sbjct: 7   KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG 65

Query: 103 LENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN 162
             +     DLV+I AG P+KPG +R DL N N  I+ ++ + +     +    + +NPV+
Sbjct: 66  EYSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVD 125

Query: 163 STVPIAAEVFKKAGTYDPKKLLG 185
               I      K   +  ++++G
Sbjct: 126 ----ILTYATWKFSGFPKERVIG 144

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

 Score = 96.5 bits (239), Expect = 1e-24
 Identities = 27/169 (15%), Positives = 50/169 (29%), Gaps = 7/169 (4%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ-----EETE 241
             LD  R    + E LG+        V+G H                         ++ +
Sbjct: 3   CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGDSVPSVWSGMNVASIKLHPLDGTNKDKQ 62

Query: 242 YLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTE 301
                 ++      E     G  + ++  +    A+  ++ L     V         + +
Sbjct: 63  DWKKLHKDVVDSAYEVIKLKGYTSWAIGLSVADLAETIMKNLCRVHPVSTMVKDFYGIKD 122

Query: 302 LPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
             F +    L   G   I ++  L   E   L+K+   L   IQK + F
Sbjct: 123 NVFLSLPCVLNDHGISNIVKM-KLKPNEEQQLQKSATTLW-DIQKDLKF 169

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 154

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 94.8 bits (235), Expect = 3e-24
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 12/150 (8%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DISHMDTGAVVRGFLGQP 101
           KVA++G+ G IG  +  L  +  L  V+    V   P   A D+SH+ +       +   
Sbjct: 9   KVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE 67

Query: 102 -QLENALTGMDLVIIPAGVPRKPG-----MTRDDLFNINAGIVRTLCEGIAKCCPNATVN 155
              E ALTG D VI+ AG+ + PG      +R+DL   N+ I+R + + I K CP   + 
Sbjct: 68  YSYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII 127

Query: 156 LISNPVNSTVPIAAEVFKKAGTYDPKKLLG 185
           +++NP++  V +  E            + G
Sbjct: 128 VVTNPLDCMVKVMCEASG----VPTNMICG 153

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 148

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 94.0 bits (233), Expect = 6e-24
 Identities = 34/147 (23%), Positives = 59/147 (40%), Gaps = 8/147 (5%)

Query: 41  GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA--DISHMDTGAVVRGFL 98
           G +V ++GA G +G      +    +   + L D   +  +    D +H    A     +
Sbjct: 6   GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDI 64

Query: 99  GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS 158
                +      DLV+I AG  +KPG TR DL + N  I R++ E +          + +
Sbjct: 65  WHGDYD-DCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123

Query: 159 NPVNSTVPIAAEVFKKAGTYDPKKLLG 185
           NPV+    I      K      ++++G
Sbjct: 124 NPVD----ILTYATWKFSGLPHERVIG 146

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 159

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.9 bits (233), Expect = 7e-24
 Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQ 100
           K+ ++G  G +G   A+ + +  L   L L D       G   D+ H     +    +  
Sbjct: 21  KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSL-FLSTPKIVF 78

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
            +  N      LVII AG     G TR DL   N  I++ +  G+ +  P+  + +++NP
Sbjct: 79  GKDYNVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNP 138

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLG 185
           V+    +      K   +   +++G
Sbjct: 139 VDILTYVVW----KISGFPVGRVIG 159

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

 Score = 93.7 bits (232), Expect = 1e-23
 Identities = 29/174 (16%), Positives = 67/174 (38%), Gaps = 17/174 (9%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILP----------LLSQVKPPCSFT 236
           T LD  R    +AE++ +D R V   ++G H                 +   VK      
Sbjct: 1   TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGDTEFPVWSHANIGGVTIAEWVKAHPEIK 60

Query: 237 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVA 296
           +++   +   +++   E+++ K   G+    +A A  + + A L        +    ++ 
Sbjct: 61  EDKLVKMFEDVRDAAYEIIKLK---GATFYGIATALARISKAILNDENAV--LPLSVYMD 115

Query: 297 SQVTEL-PFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 349
            Q      +  +   + R G + I ++ PL ++E   ++K+  +L   +    +
Sbjct: 116 GQYGINDLYIGTPAVINRNGIQNILEI-PLTDHEEESMQKSASQLKKVLTDAFA 168

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} Length = 161

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

 Score = 92.6 bits (229), Expect = 3e-23
 Identities = 29/160 (18%), Positives = 57/160 (35%), Gaps = 3/160 (1%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 246
             LD  R    ++E      ++V+  ++G H G   +P+ S+V    +  +   +     
Sbjct: 3   GRLDSARFRYVLSEEFDAPVQNVEGTILGEH-GDAQVPVFSKVSVDGTDPEFSGDEKEQL 61

Query: 247 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFA 306
           + +     ++     G+     A       +A L                    +   F 
Sbjct: 62  LGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLPASVKLEGEFGHED-TAFG 120

Query: 307 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
             V LG  G EEI +   L++YE+  +  A ++L+    K
Sbjct: 121 VPVSLGSNGVEEIVEW-DLDDYEQDLMADAAEKLSDQYDK 159

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} Length = 170

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

 Score = 92.6 bits (229), Expect = 4e-23
 Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 17/172 (9%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS------------ 234
           T LD  R    +A+  G++ ++V   + G H    +    S                   
Sbjct: 1   TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDP 60

Query: 235 FTQEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAF 294
              ++ E +   ++N   +++  K     A   +  + V   +A L        V     
Sbjct: 61  LDADKREEIHQEVKNAAYKIINGKGATNYA---IGMSGVDIIEAVLHDTNRILPVSSMLK 117

Query: 295 VASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
               ++++        L RQG        P+++ E   L+++ + L  +  +
Sbjct: 118 DFHGISDICMS-VPTLLNRQGVNNTINT-PVSDKELAALKRSAETLKETAAQ 167

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

 Score = 92.2 bits (228), Expect = 5e-23
 Identities = 27/170 (15%), Positives = 53/170 (31%), Gaps = 8/170 (4%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVK---PPCSFTQEETEYL 243
           T LD  R    + +   +DPR VD  ++G H G +     S       P     +E    
Sbjct: 1   TSLDSSRLRVALGKQFNVDPRSVDAYIMGEH-GDSEFAAYSTATIGTRPVRDVAKEQGVS 59

Query: 244 TNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVT--- 300
            + +      V        +   +  Y          + +  D   V             
Sbjct: 60  DDDLAKLEDGVRNKAYDIINLKGATFYGIGTALMRISKAILRDENAVLPVGAYMDGQYGL 119

Query: 301 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
              +  +   +G  G ++I +  PL+  E   ++ +   L   +  G++ 
Sbjct: 120 NDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQDSAATLKKVLNDGLAE 168

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 160

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score = 91.6 bits (227), Expect = 5e-23
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 8/145 (5%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ 100
           K+ ++G  G +G   A+ +    L   L L DV+     G   D+ H          +  
Sbjct: 22  KITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD 80

Query: 101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP 160
                      +V++ AGV ++ G +R +L   N  + + +   I K  P+  + ++SNP
Sbjct: 81  KDYS-VTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNP 139

Query: 161 VNSTVPIAAEVFKKAGTYDPKKLLG 185
           V+    +      K       +++G
Sbjct: 140 VDILTYVT----WKLSGLPKHRVIG 160

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.8 bits (227), Expect = 7e-23
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 10/170 (5%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------E 238
             LD  R    + E LG++P      V+G H   ++           +           +
Sbjct: 3   CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGDSSVPIWSGVNVAGVTLKSLNPAIGTDK 62

Query: 239 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ 298
             ++  N  +       E     G  + ++  +    A + L+ L+    V         
Sbjct: 63  NKQHWKNVHKQVVEGGYEVLDMKGYTSWAIGLSVTDLARSILKNLKRVHPVTTLVKGFHG 122

Query: 299 VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGI 348
           + E  F +    LG  G  +  ++  +   E   L+K+   L   +QK +
Sbjct: 123 IKEEVFLSIPCVLGESGITDFVKV-NMTAEEEGLLKKSADTLWN-MQKNL 170

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 91.5 bits (226), Expect = 8e-23
 Identities = 35/174 (20%), Positives = 59/174 (33%), Gaps = 15/174 (8%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPP----------CSFT 236
           T+LD  R  T +A+  G  PR V V V+G H    +      +                 
Sbjct: 2   TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGDSEVPVWSGAMIGGIPLQNMCQVCQKCD 61

Query: 237 QEETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVA 296
            +  E    + +    E++E K     A        V+      + +   +  +E     
Sbjct: 62  SKILENFAEKTKRAAYEIIERKGATHYAIALAVADIVESIFFDEKRVLTLSVYLEDYLGV 121

Query: 297 SQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGISF 350
             +      +  V LG+ G E I +L  LNE E     K+   L  +I +  + 
Sbjct: 122 KDL----CISVPVTLGKHGVERILEL-NLNEEELEAFRKSASILKNAINEITAE 170

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 91.4 bits (226), Expect = 8e-23
 Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 6/164 (3%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 246
           T LD +R    +A+  G+   +V   ++G H G +++PLLS         Q+   +    
Sbjct: 3   THLDSLRFKVAIAKFFGVHIDEVRTRIIGEH-GDSMVPLLSATSIGGIPIQKFERFKELP 61

Query: 247 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ----VTEL 302
           I     +V               +         +R +  +   +                
Sbjct: 62  IDEIIEDVKTKGEQIIRLKGGSEFGPAAAILNVVRCIVNNEKRLLTLSAYVDGEFDGIRD 121

Query: 303 PFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
                 V++GR G EE+  +  L++ E I   K+ + +    ++
Sbjct: 122 VCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKSAEIIKKYCEE 164

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 163

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 91.1 bits (225), Expect = 1e-22
 Identities = 28/162 (17%), Positives = 49/162 (30%), Gaps = 3/162 (1%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 246
           T+LD  R    V E   LDPR V    +G H G +     S V+          +     
Sbjct: 2   TLLDTARMQRAVGEAFDLDPRSVSGYNLGEH-GNSQFVAWSTVRVMGQPIVTLADAGDID 60

Query: 247 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFA 306
           +     E  +      +     +Y     A    + +  DA                + +
Sbjct: 61  LAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVMADAHAELVVSNRRDDMG-MYLS 119

Query: 307 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGI 348
               +GR G      L  L   E+  L +++  +     + +
Sbjct: 120 YPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDYIQQRFDEIV 160

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 91.1 bits (225), Expect = 1e-22
 Identities = 20/173 (11%), Positives = 55/173 (31%), Gaps = 15/173 (8%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 237
           T+LD  R    + E   + P++V   ++G H    +              +         
Sbjct: 1   TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESKGEEA 60

Query: 238 -EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVA 296
            ++ E +   +++   +++E K               +        +   +  ++  +  
Sbjct: 61  QKDLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGE 120

Query: 297 SQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 349
             V    +      + R G  E+ ++  LN+ E+     +   L   + +  +
Sbjct: 121 RDV----YIGVPAVINRNGIREVIEI-ELNDDEKNRFHHSAATLKSVLARAFT 168

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 145

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 89.8 bits (222), Expect = 2e-22
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 11/149 (7%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYD----VVNTPGVTADISHMDTGAVV--RG 96
           KV I+GA+G +G   A+L+   P +  L L      +    G+  DI     G       
Sbjct: 2   KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANI 61

Query: 97  FLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL 156
           ++   +    +   D+VII +GVPRK GM+R DL   NA IV    + IA+ C    + +
Sbjct: 62  YVESDENLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTK-IFV 120

Query: 157 ISNPVNSTVPIAAEVFKKAGTYDPKKLLG 185
           I+NPV+     A         ++  ++ G
Sbjct: 121 ITNPVDVMTYKAL----VDSKFERNQVFG 145

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} Length = 172

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

 Score = 90.3 bits (223), Expect = 3e-22
 Identities = 33/174 (18%), Positives = 58/174 (33%), Gaps = 18/174 (10%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 237
             LD  R    +AE LG+ P      ++G H G + + + S V       Q         
Sbjct: 3   CNLDSARFRYLMAEKLGIHPSSCHGWILGEH-GDSSVAVWSGVNVAGVSLQELNPEMGTD 61

Query: 238 ---EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAF 294
              E  + +   +     EV++ K     A   +  +     ++ L+ L     V     
Sbjct: 62  NDSENWKEVHKMVVESAYEVIKLKGYTNWA---IGLSVADLIESMLKNLSRIHPVSTMVK 118

Query: 295 VASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGI 348
               +    F +    L  +G   +     L + E   L+K+   L   IQK +
Sbjct: 119 GMYGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVAQLKKSADTLWD-IQKDL 170

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} Length = 146

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

 Score = 88.6 bits (219), Expect = 5e-22
 Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 10/148 (6%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQ 102
           K+ I+G  G +G  +A  +    +       D          I   D  A +        
Sbjct: 3   KIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI 61

Query: 103 LEN-ALTGMDLVIIPAGVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLI 157
            +  AL   D+VI   G  +     P   R       + +V+++   + +   +  + +I
Sbjct: 62  NDWAALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI 121

Query: 158 SNPVNSTVPIAAEVFKKAGTYDPKKLLG 185
           SNPV+    +   +F+    +   K++G
Sbjct: 122 SNPVD----VITALFQHVTGFPAHKVIG 145

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} Length = 169

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

 Score = 87.6 bits (216), Expect = 2e-21
 Identities = 23/171 (13%), Positives = 58/171 (33%), Gaps = 16/171 (9%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQ--------- 237
           T+LD +R    ++E LG+D ++V   ++G H    +           +  +         
Sbjct: 1   TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGDSQLPLWSCTHIAGKNINEYIDDPKCNF 60

Query: 238 --EETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFV 295
             E+ + +   ++  G  +++ K              V+        +R    V+   + 
Sbjct: 61  TEEDKKKIAEDVKTAGATIIKNKGATYYGIAVSINTIVETLLKNQNTIRTVGTVINGMYG 120

Query: 296 ASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
                     +    +  +G +E+ Q   L   E   L  + +++   + +
Sbjct: 121 IED----VAISLPSIVNSEGVQEVLQF-NLTPEEEEALRFSAEQVKKVLNE 166

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 165

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 87.2 bits (215), Expect = 3e-21
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 14/162 (8%)

Query: 188 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPL---------LSQVKPPCSFTQE 238
           +LD  R   ++++ L + PRDV+  +VG H    +L           L +       +  
Sbjct: 2   VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDA 61

Query: 239 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ 298
           E E + +R  N   E+V   A    A  +      +     L+ +   + ++E  +  S 
Sbjct: 62  ELEAIFDRTVNTALEIVNLHASPYVAPAAAIIEMAESYLKDLKKVLICSTLLEGQYGHSD 121

Query: 299 VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 340
           +    F  + V LG  G E++ +L  LN  E+   ++A  E 
Sbjct: 122 I----FGGTPVVLGANGVEQVIEL-QLNSEEKAKFDEAIAET 158

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} Length = 188

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

 Score = 83.9 bits (207), Expect = 8e-20
 Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 12/164 (7%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEET------ 240
           T LD  RA   +A   G+    V    + G+   T +P     K      +E        
Sbjct: 1   TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNAKIDGRPVKEVIKRTKWL 60

Query: 241 -EYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ- 298
            E  T  +Q  G  +++      S+  S A +      + +             +     
Sbjct: 61  EEEFTITVQKRGGALIQKW--GRSSAASTAVSIADAIKSLVTPTPEGDWFSTGVYTTGNP 118

Query: 299 --VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 340
             + E   F+   R    G  E+      +++    ++K++ EL
Sbjct: 119 YGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIKKSEAEL 162

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 173

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 82.1 bits (202), Expect = 3e-19
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 7/164 (4%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVK----PPCSFTQEETEY 242
           T LD  RA   +A+  G     +    V G+   T+ P L   +    P       E   
Sbjct: 2   TRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSSTMFPDLFHAEVDGRPALELVDMEWYE 61

Query: 243 LTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ--VT 300
                          +A   S+  S A AA++       G      V        +  + 
Sbjct: 62  KVFIPTVAQRGAAIIQARGASSAASAANAAIEHIRDWALGTPEGDWVSMAVPSQGEYGIP 121

Query: 301 ELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI 344
           E   ++  V   + GA  + +   +NE+ R  +E   +EL   +
Sbjct: 122 EGIVYSFPV-TAKDGAYRVVEGLEINEFARKRMEITAQELLDEM 164

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} Length = 174

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

 Score = 81.5 bits (200), Expect = 4e-19
 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 188 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFT---------QE 238
           MLD  R   +VA+ L + PRDV   V+G H    +  +                    ++
Sbjct: 3   MLDSGRFRRYVADALSVSPRDVQATVIGTHGDCMVPLVRYITVNGYPIQKFIKDGVVTEK 62

Query: 239 ETEYLTNRIQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQ 298
           + E +    +  G E+V    G GSA  + A +AV  A + L   +              
Sbjct: 63  QLEEIAEHTKVSGGEIVRFL-GQGSAYYAPAASAVAMATSFLNDEKRVIPCSVYCNGEYG 121

Query: 299 VTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQKGIS 349
           + +  F      +G  G E + +L  LNE E+   +K+  ++   + K ++
Sbjct: 122 LKD-MFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQKSVDDVMA-LNKAVA 169

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} Length = 162

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

 Score = 80.1 bits (197), Expect = 9e-19
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 32/167 (19%)

Query: 43  KVAILGAAGGIGQPLAMLMKI----NPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGF 97
           ++A++G  G    P  +   +    +  +  +  YD+      +  D          +  
Sbjct: 2   RIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVL 60

Query: 98  LGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA----------- 146
           +     E A+     VI         G   D+   +  G++     G+            
Sbjct: 61  ISD-TFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPI 119

Query: 147 --------KCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG 185
                   +   NAT+   +NP         E  +     + +K +G
Sbjct: 120 VEEYVDTVRKTSNATIVNFTNPSG----HITEFVRNY--LEYEKFIG 160

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]} Length = 171

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

 Score = 79.9 bits (196), Expect = 2e-18
 Identities = 23/158 (14%), Positives = 44/158 (27%), Gaps = 7/158 (4%)

Query: 189 LDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCS-----FTQEETEYL 243
           LD  RA + +A   G     ++   V G+   T+       +   +        +     
Sbjct: 3   LDHNRALSQIAAKTGKPVSSIEKLFVWGNHSPTMYADYRYAQIDGASVKDMINDDAWNRD 62

Query: 244 TNRIQNGGTEVVEAKAGAGSATLSM-AYAAVKFADACLRGLRGDAGVVECAFVASQVTEL 302
           T     G        A   S+  S    A     D  L        +   +  +  + E 
Sbjct: 63  TFLPTVGKRGAAIIDARGVSSAASAANAAIDHIHDWVLGTAGKWTTMGIPSDGSYGIPEG 122

Query: 303 PFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL 340
             F   V       + +  L  ++ + +  +     EL
Sbjct: 123 VIFGFPVTTENGEYKIVQGL-SIDAFSQERINVTLNEL 159

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} Length = 169

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 73.9 bits (181), Expect = 2e-16
 Identities = 26/161 (16%), Positives = 42/161 (26%), Gaps = 30/161 (18%)

Query: 43  KVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVVNTP--GVTADISH---MDTGAV 93
           K+A +G  G    P  +   I       V  L L D+                 ++   V
Sbjct: 3   KIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGV 61

Query: 94  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGI-------- 145
                       AL G D V     V       +D+   +  G++     G         
Sbjct: 62  PIEIHLTLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLR 121

Query: 146 ------------AKCCPNATVNLISNPVNSTVPIAAEVFKK 174
                        + CP+A +   +NP            K+
Sbjct: 122 TIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAVLRYTKQ 162

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} Length = 167

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

 Score = 73.5 bits (180), Expect = 2e-16
 Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 30/162 (18%)

Query: 42  FKVAILGAAGGIGQP---LAMLMKINPL-VSVLHLYDV----VNTPGVTADISHMDTGAV 93
           F + I G  G    P   L +L  +    +  L LYD      +      D+   +    
Sbjct: 4   FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPD 62

Query: 94  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIA------- 146
           +         E A T +D V+    V +      D+   +  G+V     G         
Sbjct: 63  IEFA-ATTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMR 121

Query: 147 -------------KCCPNATVNLISNPVNSTVPIAAEVFKKA 175
                        K  P+A +   SNP          +   +
Sbjct: 122 SIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPNS 163

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

 Score = 67.5 bits (164), Expect = 4e-14
 Identities = 25/166 (15%), Positives = 41/166 (24%), Gaps = 34/166 (20%)

Query: 41  GFKVAILGAAGGIGQPLAM---LMKINPL-VSVLHLYDVV--NTPGVTADISHM-DTGAV 93
             K+ I+GA G     L +   L K   L  S + L D+       +        +    
Sbjct: 2   SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGA 60

Query: 94  VRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNI-------------------- 133
              F     L++ +   D VI  A V     + +                          
Sbjct: 61  DLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYY 120

Query: 134 ------NAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK 173
                        +   I K  P A     +NP+     +      
Sbjct: 121 TFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTTLVTRTVP 166

>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 152

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 63.1 bits (153), Expect = 9e-13
 Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 12/160 (7%)

Query: 187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNR 246
             LD  R    +      + R     ++G H G ++    S          E  E   N 
Sbjct: 2   NQLDSQRLKERLYNAGARNIRRA--WIIGEH-GDSMFVAKSLADFDGEVDWEAVE---ND 55

Query: 247 IQNGGTEVVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFA 306
           ++    EV++     G+     A A  +   A +                  +  +    
Sbjct: 56  VRFVAAEVIK---RKGATIFGPAVAIYRMVKAVVEDTGEIIPTSMILQGEYGIENV-AVG 111

Query: 307 SKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQK 346
              +LG+ GAE +  +  L++ E   L  + K L   +++
Sbjct: 112 VPAKLGKNGAE-VADI-KLSDEEIEKLRNSAKILRERLEE 149

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	353
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	100.0
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	100.0
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	100.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	99.98
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	99.97
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	99.97
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	99.97
d1mlda2	169	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.97
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	99.97
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	99.97
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	99.97
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	99.97
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	99.97
d1ez4a2	171	Lactate dehydrogenase {Lactobacillus pentosus [Tax	99.97
d2cmda2	167	Malate dehydrogenase {Escherichia coli [TaxId: 562	99.97
d1guza2	163	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	99.97
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	99.97
d1uxja2	164	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	99.97
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	99.97
d1ojua2	152	Lactate dehydrogenase {Archaeon Archaeoglobus fulg	99.97
d1llda2	170	Lactate dehydrogenase {Bifidobacterium longum, str	99.97
d5mdha2	179	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.97
d1a5za2	172	Lactate dehydrogenase {Thermotoga maritima [TaxId:	99.96
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	99.96
d1pzga2	174	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	99.96
d7mdha2	188	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	99.96
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	99.96
d1y6ja2	169	Lactate dehydrogenase {Clostridium thermocellum [T	99.96
d1t2da2	165	Lactate dehydrogenase {Malaria parasite (Plasmodiu	99.96
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	99.96
d1o6za2	161	Malate dehydrogenase {Archaeon Haloarcula marismor	99.96
d1hyea2	168	MJ0490, lactate/malate dehydrogenase {Archaeon Met	99.96
d1hyha2	163	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	99.96
d1ldna2	168	Lactate dehydrogenase {Bacillus stearothermophilus	99.96
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	99.96
d1i0za2	172	Lactate dehydrogenase {Human (Homo sapiens), heart	99.96
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	99.96
d1ldma2	169	Lactate dehydrogenase {Dogfish (Squalus acanthias)	99.96
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	99.95
d1llca2	172	Lactate dehydrogenase {Lactobacillus casei [TaxId:	99.95
d2ldxa2	172	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	99.95
d1y7ta2	173	Malate dehydrogenase {Thermus thermophilus [TaxId:	99.94
d1b8pa2	171	Malate dehydrogenase {Aquaspirillum arcticum [TaxI	99.93
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	99.92
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	99.9
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	99.89
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	99.88
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	99.47
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	98.88
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	98.71
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	98.62
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.47
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	98.45
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.44
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.39
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.39
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	98.37
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	98.34
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.3
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.29
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.25
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	98.25
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.23
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	98.15
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.13
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.11
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.1
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	98.03
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.0
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.98
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.95
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.94
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	97.91
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.87
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	97.81
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	97.8
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.77
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	97.76
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	97.73
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.72
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	97.7
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	97.64
d1up7a2	253	6-phospho-beta-glucosidase {Thermotoga maritima [T	97.56
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.55
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	97.53
d1s6ya2	270	6-phospho-beta-glucosidase {Bacillus stearothermop	97.5
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	97.45
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.44
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	97.44
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	97.43
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.42
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.41
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	97.39
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.35
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.33
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	97.32
d1u8xx2	276	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	97.31
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.3
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	97.28
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	97.23
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	97.15
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.12
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.04
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	97.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	97.0
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	96.98
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.94
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.94
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	96.93
d1obba2	308	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.85
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.83
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.79
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.78
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.74
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.72
d1vjta2	278	Putative alpha-glucosidase TM0752 {Thermotoga mari	96.63
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.61
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.6
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.55
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.53
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.53
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.52
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.52
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	96.49
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.48
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	96.47
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.47
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	96.45
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.45
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.44
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.39
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	96.39
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	96.35
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.35
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.32
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	96.32
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	96.29
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.28
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	96.27
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.27
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.25
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.25
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.24
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.19
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.18
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	96.16
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.15
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	96.14
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	96.12
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.09
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.06
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	96.05
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.04
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.03
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.01
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	96.0
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.99
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	95.94
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	95.93
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	95.86
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	95.86
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.86
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	95.84
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	95.82
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	95.8
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	95.68
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.67
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.65
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.62
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	95.59
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	95.54
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	95.53
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.52
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.47
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	95.46
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	95.46
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.44
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	95.41
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	95.38
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.32
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	95.32
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	95.29
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.22
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	95.21
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	95.18
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	95.13
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	95.04
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	94.96
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.94
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.91
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.81
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	94.77
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.75
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.73
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	94.71
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	94.71
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.7
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	94.67
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	94.66
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.63
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.63
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	94.62
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.59
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.59
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.54
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	94.53
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	94.52
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	94.49
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	94.48
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	94.43
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	94.28
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.18
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	94.14
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.07
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	94.04
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.02
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.01
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.84
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.82
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	93.77
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.76
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	93.69
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	93.69
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.6
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.51
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	93.48
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	93.39
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	93.35
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	93.31
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.19
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	93.19
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	93.19
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.09
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	93.04
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	92.9
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	92.9
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.89
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	92.87
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	92.87
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	92.84
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	92.77
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	92.73
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	92.67
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	92.47
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	92.45
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.42
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	92.4
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.39
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.37
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	92.25
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	92.22
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.13
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	92.07
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	92.07
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.0
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	91.99
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.97
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.87
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.86
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	91.86
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.86
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	91.83
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.81
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	91.81
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	91.78
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	91.57
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	91.53
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	91.52
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.47
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.41
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.31
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.26
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	90.99
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	90.82
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.58
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	90.47
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	90.43
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	90.29
d1gq2a1	298	Mitochondrial NAD(P)-dependent malic enzyme {Domes	90.22
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.91
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	89.84
d1duvg2	183	Ornithine transcarbamoylase {Escherichia coli [Tax	89.78
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	89.63
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	89.49
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.47
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	89.41
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.28
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	89.2
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	88.86
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	88.76
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	88.68
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	88.65
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	88.63
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	88.56
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	88.48
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	88.27
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	88.1
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	87.6
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	87.59
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.46
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	87.34
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.32
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	87.15
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	87.09
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	86.83
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.78
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	85.47
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	85.42
d2h1qa1	251	Hypothetical protein Dhaf_3308 {Desulfitobacterium	85.07
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	85.04
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	84.54
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	84.34
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	84.3
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	84.23
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	84.04
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	83.87
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	83.46
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	83.44
d1ml4a2	157	Aspartate carbamoyltransferase catalytic subunit {	83.43
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	83.3
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	83.28
d1j8yf2	211	GTPase domain of the signal sequence recognition p	83.18
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	82.98
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.6
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	81.96
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	81.73
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	81.47
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	81.37
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	81.35
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.2
d1otha2	170	Ornithine transcarbamoylase {Human (Homo sapiens)	80.68
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	80.14
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	80.04

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=3.4e-34  Score=241.20  Aligned_cols=143  Identities=64%  Similarity=1.084  Sum_probs=133.5

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRK  122 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~~  122 (353)
                      ||+||||+|+||+++|+.|+.+++++||+|+|+++.+++++|++|.........+..+++++++++|||+||+++|.|++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~~   81 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRK   81 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCCC
Confidence            99999977999999999999999999999999988899999999987655555544567778999999999999999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          123 PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       123 ~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      +||+|.+++..|+++++++++.+.+++|+++++++|||+|.+|+++++++++.++||++||||
T Consensus        82 ~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvtNPvD~~t~~~~~~~kk~~~~p~~rViG  144 (144)
T d1mlda1          82 PGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISNPVNSTIPITAEVFKKHGVYNPNKIFG  144 (144)
T ss_dssp             TTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHHHHHHHHHHHHTTCCCTTSEEE
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhhhHHHHHHHHHHhcCCCcccccC
Confidence            999999999999999999999999999999999999999999999988889999999999998

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-33  Score=237.18  Aligned_cols=143  Identities=59%  Similarity=0.968  Sum_probs=131.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||+|||++|+||+++++.|+.+ +..+||+|+|+++ ++|+++||+|+........+..++++ ++++|||+||+++|.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~-~~~~~aDvvvitaG~   79 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDAT-PALEGADVVLISAGV   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCH-HHHTTCSEEEECCSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCc-cccCCCCEEEECCCc
Confidence            79999997799999999988754 7889999999977 78999999998766666666556665 789999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      |+++|++|.|++..|.+++++++++|.+++|+++++++|||+|.++++++++++++++||++|+||
T Consensus        80 ~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvtNPvD~m~~~~~~v~~~~~~l~~~RviG  145 (145)
T d2cmda1          80 RRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFG  145 (145)
T ss_dssp             CCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHHHHHHHHTTCCCGGGEEE
T ss_pred             cCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEccCCchHHHHHHHHHHHHcCCCChhhccC
Confidence            999999999999999999999999999999999999999999999999999999999999999998

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=100.00  E-value=2.1e-33  Score=235.97  Aligned_cols=139  Identities=27%  Similarity=0.414  Sum_probs=124.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |.||+|||+ |+||+++|+.|+.+++++||+|+|+++  ++|+++||+|+... ...... .++++ ++++|||+||+++
T Consensus         1 p~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~-~~~~~-~~~~daDvVVita   77 (143)
T d1llda1           1 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSID-GSDDP-EICRDADMVVITA   77 (143)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEE-EESCG-GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceee-cCCCH-HHhhCCcEEEEec
Confidence            579999998 999999999999999999999999988  78999999998532 222222 23565 6799999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |.++++|++|.|++..|+++++++++.|.+++|++++|++|||+|++|+++    ++.+|||++||||+
T Consensus        78 G~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~ivvtNPvDvmt~~~----~~~sg~p~~rViG~  142 (143)
T d1llda1          78 GPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVA----QKLTGLPENQIFGS  142 (143)
T ss_dssp             CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHH----HHHHTCCTTSEEEC
T ss_pred             ccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEEeCCchHHHHHHH----HHHHCCChhhccCC
Confidence            999999999999999999999999999999999999999999999998764    78899999999996

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.98  E-value=7.9e-33  Score=232.36  Aligned_cols=138  Identities=28%  Similarity=0.501  Sum_probs=123.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||+ |+||+++|+.|+.+++++||+|+|+++  ++|+++||+|+..  ....+.. .++|+ ++++|||+||+++
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~-~~~d~-~~~~~adiVvita   77 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIV-GGADY-SLLKGSEIIVVTA   77 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEE-EESCG-GGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccc-cCCCH-HHhccccEEEEec
Confidence            89999998 999999999999999999999999988  7899999999742  1222222 23575 7899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |.|+++|++|.+++.+|+++++++++.+.++||+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        78 g~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvtNPvD~~t~~~----~k~sg~p~~rViG~  142 (142)
T d1ojua1          78 GLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTNPMDVMTYIM----WKESGKPRNEVFGM  142 (142)
T ss_dssp             CCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSSSHHHHHHHH----HHHSCCCTTSEEEC
T ss_pred             cccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEecCChHHHHHHH----HHHHCCChhcEecC
Confidence            999999999999999999999999999999999999999999999998764    78899999999996

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=7.3e-33  Score=234.32  Aligned_cols=137  Identities=24%  Similarity=0.325  Sum_probs=123.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .||+|||| |+||+++|+.|++.++++||+|+|+++  ++|+++||+|+...  ..+...  +.|+ ++++|||+||+++
T Consensus         7 ~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~--~~d~-~~l~daDvvvita   82 (148)
T d1ldna1           7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--HGDY-DDCRDADLVVICA   82 (148)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE--ECCG-GGTTTCSEEEECC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEE--ECCH-HHhccceeEEEec
Confidence            49999998 999999999999999999999999988  78999999997542  234443  3564 8899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |.++++|++|.|++.+|+++++++++.|.++||+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        83 g~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvtNPvd~~t~~~----~k~sg~p~~rViG~  147 (148)
T d1ldna1          83 GANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYAT----WKFSGLPHERVIGS  147 (148)
T ss_dssp             SCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECSSSHHHHHHHH----HHHHTCCGGGEEEC
T ss_pred             ccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEecCccHHHHHHH----HHHHCcChhheecC
Confidence            999999999999999999999999999999999999999999999998764    67889999999996

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.97  E-value=6.8e-32  Score=226.68  Aligned_cols=137  Identities=29%  Similarity=0.391  Sum_probs=116.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      .||+|||| |+||+++++.|++.++++||+|+|+++  ++|+++||+|+.. ......+  +.| +++++|||+||+++|
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~--~~~-~~~~~~adivvitag   77 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY--AGD-YSDVKDCDVIVVTAG   77 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----C-GGGGTTCSEEEECCC
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEe--eCc-HHHhCCCceEEEecc
Confidence            49999998 999999999999999999999999988  7899999999753 2344443  345 478999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      .++++|++|.+++.+|++++++++++|.+++|+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        78 ~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvtNPvdv~t~~~----~k~sg~p~~rViG~  141 (142)
T d1y6ja1          78 ANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSNPVDIITYMI----QKWSGLPVGKVIGS  141 (142)
T ss_dssp             C------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSSSHHHHHHHH----HHHHTCCTTTEEEC
T ss_pred             cccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEecChHHHHHHHH----HHHHCCCccceecC
Confidence            99999999999999999999999999999999999999999999998764    78889999999996

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.97  E-value=3.9e-32  Score=227.70  Aligned_cols=137  Identities=29%  Similarity=0.500  Sum_probs=122.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      |||+|||| |+||+++++.|+..++++||+|+|+++  ++++++|+.|... .......  ++| +++++|||+||+++|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~--~~~-~~~~~~adivvitag   76 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY--AGD-YADLKGSDVVIVAAG   76 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE--ECC-GGGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhcccccccccccccccc--CCc-HHHhcCCCEEEEecc
Confidence            79999998 999999999999999999999999988  7899999999652 2333333  245 478999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      .++++|++|.|++.+|+++++++++.|.++||+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        77 ~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivvtNPvd~~t~~~----~k~sg~p~~rViGt  140 (140)
T d1a5za1          77 VPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPVDVLTYFF----LKESGMDPRKVFGS  140 (140)
T ss_dssp             CCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHTCCTTTEEEC
T ss_pred             cccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEeCCcHHHHHHHH----HHHHCcCccceeCc
Confidence            99999999999999999999999999999999999999999999998764    67789999999995

>d1mlda2 d.162.1.1 (A:145-313) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=2.4e-31  Score=229.68  Aligned_cols=167  Identities=53%  Similarity=0.837  Sum_probs=145.5

Q ss_pred             echhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618          186 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  265 (353)
Q Consensus       186 ~t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~  265 (353)
                      +|.||++||++++|++||++|++|+++|+|+||+++++|+||++.++..+..++++++.+.+++++++|++.+.+.+++.
T Consensus         1 ~T~LDs~R~~~~la~~l~v~~~~V~~~ViGeHg~~t~vp~~s~~~~~~~~~~~~~~~l~~~v~~~~~eii~~k~~~~~~~   80 (169)
T d1mlda2           1 VTTLDIVRANAFVAELKGLDPARVSVPVIGGHAGKTIIPLISQCTPKVDFPQDQLSTLTGRIQEAGTEVVKAKAGAGSAT   80 (169)
T ss_dssp             CCHHHHHHHHHHHHHHTTCCGGGCBCCEEECSSGGGEEECGGGCBSCCCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCC
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeeEEEEEcCCCcceeehhhhhccCCCCcHHHHHHHHHHHHHhHHHHHHhhcCcChHh
Confidence            47899999999999999999999999999999776899999998887788888999999999999999999886667778


Q ss_pred             chHHHHHHHHHHHHHhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018618          266 LSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  345 (353)
Q Consensus       266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~  345 (353)
                      ++++.++++++.+++.+..+...+.++++......+++|||+||+||++|+++++++++|+++|+++|++|++.|++.++
T Consensus        81 ~~~~~a~~~~~~~i~~~~~~~~~v~~~~~~~~~~~~~v~~s~P~~ig~~Gi~~v~~l~~L~~~E~~~l~~s~~~lk~~I~  160 (169)
T d1mlda2          81 LSMAYAGARFVFSLVDAMNGKEGVVECSFVKSQETDCPYFSTPLLLGKKGIEKNLGIGKISPFEEKMIAEAIPELKASIK  160 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTCEEEEEEECCSSSSSEEEEEEEEETTEEEEECCCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccccCCceEEEEEeeccccccCCEeEeeeEEEcCCccEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            88999999999999877654444554444222224689999999999999999999767999999999999999999999


Q ss_pred             Hhhhhhc
Q 018618          346 KGISFSK  352 (353)
Q Consensus       346 ~~~~~~~  352 (353)
                      +|++|++
T Consensus       161 ~g~~fi~  167 (169)
T d1mlda2         161 KGEEFVK  167 (169)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9999986

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=99.97  E-value=1.4e-31  Score=224.30  Aligned_cols=137  Identities=28%  Similarity=0.399  Sum_probs=120.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCC-CCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT-GAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~-~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .||+||||+|+||+++|+.|+++++++||+|+|++.    ++|+++||+|+.. ....+..  +.++ ++++|||+||++
T Consensus         1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~--~~~~-~~~~~aDiVvit   77 (142)
T d1o6za1           1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR--QGGY-EDTAGSDVVVIT   77 (142)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE--ECCG-GGGTTCSEEEEC
T ss_pred             CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEe--eCCH-HHhhhcCEEEEe
Confidence            399999976999999999999999999999999754    5789999999532 2233333  2454 779999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      +|.|+++||+|.|++..|+++++++++.|.+++|+++++++|||+|++|++    +++.+|||++||||
T Consensus        78 aG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~ivvtNPvDvmt~~----~~k~sg~~~~rViG  142 (142)
T d1o6za1          78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSNPVDLLNRH----LYEAGDRSREQVIG  142 (142)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCSSHHHHHHH----HHHHSSSCGGGEEE
T ss_pred             cccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEEecChHHHHHHH----HHHHHCcCcccccC
Confidence            999999999999999999999999999999999999999999999999865    47889999999998

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=99.97  E-value=4.9e-32  Score=231.32  Aligned_cols=138  Identities=22%  Similarity=0.347  Sum_probs=123.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      +..||+|||+ |+||+++++.|+..++++||+|+|+++  ++|+++||+|+...  .....  .+.|+ ++++|||+||+
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~--~~~d~-~~~~~adiVVi   94 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIV--ADKDY-SVTANSKIVVV   94 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEE--ECSSG-GGGTTCSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEE--eccch-hhcccccEEEE
Confidence            4569999998 999999999999999999999999987  78999999997532  22222  24564 78999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      ++|.++++|++|.+++..|+++++++++.|.+++|+++++++|||+|++|+++    ++.+|||++||||
T Consensus        95 tAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvtNPvDv~t~~~----~k~sglp~~rViG  160 (160)
T d1i0za1          95 TAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDILTYVT----WKLSGLPKHRVIG  160 (160)
T ss_dssp             CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEEE
T ss_pred             ecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchHHHHHHH----HHHHCcCcccccC
Confidence            99999999999999999999999999999999999999999999999998764    6788999999998

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=99.97  E-value=5e-32  Score=227.63  Aligned_cols=138  Identities=32%  Similarity=0.504  Sum_probs=122.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||| |+||+++++.|+..++++||+|+|+++  +++.++|+.|...  ....+.. .++| +++++|||+||+++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~-~~~~-~~~~~dadvvvita   77 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVT-GSND-YADTANSDIVIITA   77 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEE-EESC-GGGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEE-ecCC-HHHhcCCeEEEEEE
Confidence            79999998 999999999999999999999999988  6888899988752  2223322 1356 47899999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |.|+++|++|.+++.+|+++++++++.|.++||++|++++|||+|.+|+++    ++.+|||++||||+
T Consensus        78 g~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNPvd~~~~~~----~~~sg~p~~rviG~  142 (142)
T d1guza1          78 GLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVA----WVRSGLPKERVIGM  142 (142)
T ss_dssp             SCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCSSHHHHHHHH----HHHHCSCGGGEEEE
T ss_pred             ecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEEecCChHHHHHHH----HHHhCCChHhEeeC
Confidence            999999999999999999999999999999999999999999999998764    67789999999996

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.97  E-value=2.8e-31  Score=223.42  Aligned_cols=138  Identities=30%  Similarity=0.465  Sum_probs=119.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cHHHHHHHhcCCC--CCeEEEE-eCCCchhhhhCCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TPGVTADISHMDT--GAVVRGF-LGQPQLENALTGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~~~~~dl~~~~~--~~~v~~~-~~t~d~~~al~~ADiVI  114 (353)
                      |||+||||+|+||+++|+.|++.++++||+|+|+++    ++|+++||.|+..  ....+.. ..++| +++++|||+||
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d-~~~l~~aDvVV   79 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN-LRIIDESDVVI   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC-GGGGTTCSEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch-HHHhccceEEE
Confidence            799999977999999999999999999999999986    4688999999642  2333332 12345 47899999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      +|+|.|+++|++|.|++..|+++++++++.+.++||+++ +++|||+|++|+++    ++.+|||++||||
T Consensus        80 itAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~i-ivVtNPvD~mt~~~----~k~sg~p~~rViG  145 (145)
T d1hyea1          80 ITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKI-FVITNPVDVMTYKA----LVDSKFERNQVFG  145 (145)
T ss_dssp             ECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEE-EECSSSHHHHHHHH----HHHHCCCTTSEEE
T ss_pred             EecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeE-EEEcCchHHHHHHH----HHHHCcCcccccC
Confidence            999999999999999999999999999999999999876 46899999998765    6788999999998

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=99.97  E-value=2.5e-32  Score=230.30  Aligned_cols=137  Identities=18%  Similarity=0.252  Sum_probs=115.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC--CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG--AVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~--~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +||+|||+ |+||+++++.|+..++++||+|+|+++  ++|+++||+|+...  ......  ++|+ ++++|||+||+++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~--~~d~-~~l~~adiVVita   77 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIV--INDW-AALADADVVISTL   77 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEE--ESCG-GGGTTCSEEEECC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCcccee--ccCH-HHhccccEEEEec
Confidence            49999998 999999999999999999999999988  78999999997532  233333  3564 7799999999999


Q ss_pred             CCCC----CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          118 GVPR----KPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       118 g~~~----~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |.++    ++|++|.+++..|+++++++++.+.++||++++|++|||+|++|+++    ++.+|||++||||+
T Consensus        78 G~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivvtNPvD~~t~~~----~k~sg~p~~rViGt  146 (146)
T d1hyha1          78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITALF----QHVTGFPAHKVIGT  146 (146)
T ss_dssp             SCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             cccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecCcHHHHHHHH----HHHhCCCccceeCc
Confidence            9876    67899999999999999999999999999999999999999998764    78889999999995

>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=99.97  E-value=5.3e-31  Score=227.87  Aligned_cols=158  Identities=18%  Similarity=0.328  Sum_probs=143.1

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVE  256 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~  256 (353)
                      |.||++|+++++|+++|++|++|+++|||+||+ +++|+||++++.+          .+..++++++.+.++.+++++++
T Consensus         1 T~LD~~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-t~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~   79 (171)
T d1ez4a2           1 TSLDSSRLRVALGKQFNVDPRSVDAYIMGEHGD-SEFAAYSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIIN   79 (171)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEESSSSS-SCEECGGGCEETTEEHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEEEEccCCC-cccccccccccCCccceeecccccccchhhhhheeehhhhhHHHHH
Confidence            689999999999999999999999999999999 9999999998743          35566788899999999999988


Q ss_pred             hhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618          257 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  334 (353)
Q Consensus       257 ~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~  334 (353)
                         ++|++.|++|.++.+++++++.+..   .+++++ +++|+| .+++|||+||++|++|+++++++ +|+++|+++|+
T Consensus        80 ---~k~s~~~a~a~~~~~~~~~i~~~~~---~~~~~~~~~~~~~g~~~~~~S~Pv~lg~~Gv~~v~~l-~Ls~~E~~~l~  152 (171)
T d1ez4a2          80 ---LKGATFYGIGTALMRISKAILRDEN---AVLPVGAYMDGQYGLNDIYIGTPAIIGGTGLKQIIES-PLSADELKKMQ  152 (171)
T ss_dssp             ---HHSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             ---hhhhHhHHHHHHHHHHHHHHhccCC---ceEEEEEeeccccCccceeeeEEEEEcCCcEEEEeCC-CCCHHHHHHHH
Confidence               4589999999999999999999865   466665 789998 77999999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHHHhhhhhc
Q 018618          335 KAKKELAGSIQKGISFSK  352 (353)
Q Consensus       335 ~s~~~l~~~~~~~~~~~~  352 (353)
                      +|++.|++.++++++.++
T Consensus       153 ~s~~~l~~~i~~~l~~l~  170 (171)
T d1ez4a2         153 DSAATLKKVLNDGLAELE  170 (171)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhc
Confidence            999999999999998775

>d2cmda2 d.162.1.1 (A:146-312) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.7e-30  Score=223.73  Aligned_cols=167  Identities=53%  Similarity=0.792  Sum_probs=146.5

Q ss_pred             echhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618          186 VTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  265 (353)
Q Consensus       186 ~t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~  265 (353)
                      +|.||++||++++|+++|++|++|+++|+|+||+.+++|++|++.. ..+++.+++++.+.++.++.++++.+.|++++.
T Consensus         1 ~T~LDs~R~~~~iA~~l~v~~~~V~~~ViGghg~~~~~p~~s~~~~-~~~~~~~~~~l~~~v~~~g~~ii~~~~~~~~~~   79 (167)
T d2cmda2           1 VTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQVPG-VSFTEQEVADLTKRIQNAGTEVVEAKAGGGSAT   79 (167)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGCCCCEEECSSTTTEEECGGGCTT-CCCCHHHHHHHHHHHHHHHHHHHHHHTTSCSCC
T ss_pred             CcccHHHHHHHHHHHHHCcCHHHeEEEEEEcCCCceEeeecccccC-CCCcHHHHHHHHHHHHhhhhhhhhhhccCcchH
Confidence            3789999999999999999999999999999998677787676553 457788899999999999999999887888999


Q ss_pred             chHHHHHHHHHHHHHhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHHH
Q 018618          266 LSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSIQ  345 (353)
Q Consensus       266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~~  345 (353)
                      +|+|.++++++++|+.+.++...+..+++.....+.++|||+||++|++|+++++++++|+++|+++|+.|+++|++.++
T Consensus        80 ~~~a~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~s~P~~ig~~Gv~~v~~l~~L~~~E~~~l~~s~~~lk~~I~  159 (167)
T d2cmda2          80 LSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVEERKSIGTLSAFEQNALEGMLDTLKKDIA  159 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSSCEEEEEEECCCSSCSEEEEEEEEETTEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCceEEEEEcccccccCCCccccccEEEeCCceEEEeeCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998876554544444444346689999999999999999999757999999999999999999999


Q ss_pred             HhhhhhcC
Q 018618          346 KGISFSKK  353 (353)
Q Consensus       346 ~~~~~~~~  353 (353)
                      +|++|++|
T Consensus       160 ~~~~fi~~  167 (167)
T d2cmda2         160 LGQEFVNK  167 (167)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHhcC
Confidence            99999986

>d1guza2 d.162.1.1 (A:143-305) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=99.97  E-value=6.8e-31  Score=225.65  Aligned_cols=153  Identities=28%  Similarity=0.471  Sum_probs=139.2

Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCC
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAG  262 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg  262 (353)
                      +||++||++++|+++|++|++|+++|||+||+ +++|+||++++.+     .++++.++++.+.+++++.+|++.+ |+|
T Consensus         3 ~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-s~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~~-~kg   80 (163)
T d1guza2           3 VLDAARFRSFIAMELGVSMQDINACVLGGHGD-AMVPVVKYTTVAGIPISDLLPAETIDKLVERTRNGGAEIVEHL-KQG   80 (163)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEECCEEECSGG-GEEECGGGCEETTEEHHHHSCHHHHHHHHHHHHTHHHHHHHHH-SSS
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-CcccCHhhcccCCccccccCCHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence            69999999999999999999999999999999 9999999999854     2566678899999999999999865 789


Q ss_pred             cccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHH
Q 018618          263 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL  340 (353)
Q Consensus       263 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l  340 (353)
                      ++.|+++.++.+++++++.+.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +||++|+++|++|++.|
T Consensus        81 sa~~a~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~g~~~~~~s~P~~lg~~Gv~~i~~l-~Ls~~E~~~l~~sa~~l  156 (163)
T d1guza2          81 SAFYAPASSVVEMVESIVLDRK---RVLPCAVGLEGQYGIDKTFVGVPVKLGRNGVEQIYEI-NLDQADLDLLQKSAKIV  156 (163)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             CcchhHHHHHHHHHHheeccCC---CEEEEeeeeccccCCCCcEEEEeeEEcCCeeEEEecC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999998765   477776 678998 67999999999999999999996 99999999999999999


Q ss_pred             HHHHHH
Q 018618          341 AGSIQK  346 (353)
Q Consensus       341 ~~~~~~  346 (353)
                      ++.++.
T Consensus       157 ~~~i~~  162 (163)
T d1guza2         157 DENCKM  162 (163)
T ss_dssp             HHHHHT
T ss_pred             HHHHhh
Confidence            988763

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=99.97  E-value=1.3e-31  Score=225.80  Aligned_cols=138  Identities=25%  Similarity=0.394  Sum_probs=113.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .+||+|||+ |+||+++|+.|++.++++||+|+|+++  ++|+++||+|+... ......  ++|+ ++++|||+||+++
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~--~~d~-~~~~~adivvita   80 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY--SGEY-SDCKDADLVVITA   80 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE--ECCG-GGGTTCSEEEECC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEe--eccH-HHhccccEEEEec
Confidence            569999998 999999999999999999999999988  78999999997532 223333  3575 6789999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          118 GVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       118 g~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |.++++|++|.+++..|+++++++++.|.+++|+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        81 g~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvtNPvdv~t~~~----~k~sg~p~~rViG~  145 (146)
T d1ez4a1          81 GAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYAT----WKFSGFPKERVIGS  145 (146)
T ss_dssp             CC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             ccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeCCccHHHHHHH----HHHHCcCccceecC
Confidence            999999999999999999999999999999999999999999999998764    67889999999996

>d1uxja2 d.162.1.1 (A:144-307) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=99.97  E-value=1e-30  Score=224.74  Aligned_cols=153  Identities=29%  Similarity=0.447  Sum_probs=139.7

Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCChHHHHHHHHHHhcchhhhhhhhccCC
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFTQEETEYLTNRIQNGGTEVVEAKAGAG  262 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~~~el~~~v~~~~~~i~~~~~gkg  262 (353)
                      .||++||++++|+++|++|.+|+++|||+||+ +++|+||++++++     .+++..++++.+.+++++++|++.+ ++|
T Consensus         3 ~LD~~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~v~~~s~~~i~g~~~~~~~~~~~~~~~~~~v~~~g~~ii~~~-~kg   80 (164)
T d1uxja2           3 VLDAARYRTFIAMEAGVSVKDVQAMLMGGHGD-EMVPLPRFSTISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLL-KTG   80 (164)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEEECCEECSGG-GEECCGGGEEETTEEGGGTSCHHHHHHHHHHHHTHHHHHHHHH-SSS
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-ceeeeeeeeecCCCchhhccchhhHHHHHHHHHHHHHHHHHHH-hcC
Confidence            59999999999999999999999999999999 9999999998753     3456678999999999999999876 789


Q ss_pred             cccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHH
Q 018618          263 SATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKEL  340 (353)
Q Consensus       263 ~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l  340 (353)
                      ++.|++|.++++++++|+.+.+   .+++++ +++|+| .++++||+||++|++|+++++++ +||++|+++|++|++.|
T Consensus        81 s~~~a~a~a~~~i~~~i~~~~~---~~~~~~~~~~g~ygi~~~~~s~P~~ig~~Gv~~v~~l-~L~~~E~~~l~~s~~~l  156 (164)
T d1uxja2          81 SAYYAPAAATAQMVEAVLKDKK---RVMPVAAYLTGQYGLNDIYFGVPVILGAGGVEKILEL-PLNEEEMALLNASAKAV  156 (164)
T ss_dssp             CCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHhCCCC---ceeeeeeeeccccCCCCceEEECeEEeCCeeEEEeCC-CCCHHHHHHHHHHHHHH
Confidence            9999999999999999999865   477776 689999 67899999999999999999996 99999999999999999


Q ss_pred             HHHHHH
Q 018618          341 AGSIQK  346 (353)
Q Consensus       341 ~~~~~~  346 (353)
                      ++.++.
T Consensus       157 k~~i~~  162 (164)
T d1uxja2         157 RATLDT  162 (164)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            999876

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=1.7e-31  Score=227.85  Aligned_cols=139  Identities=24%  Similarity=0.374  Sum_probs=123.2

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +..||+|||+ |+||+++|+.|+..++++||+|+|+++  ++|+++||+|+... ..-... .+.|+ +++++||+||++
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~-~~~d~-~~~~~adivvit   94 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIV-FGKDY-NVSANSKLVIIT   94 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEE-EESSG-GGGTTEEEEEEC
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEE-eccch-hhhccccEEEEe
Confidence            3459999998 999999999999999999999999987  78999999998642 211222 23564 778999999999


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      +|.++++|++|.+++..|+++++++++.|.+++|+++++++|||+|++|+++    ++.+|||++||||
T Consensus        95 ag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvtNPvDv~t~~~----~k~sg~p~~rV~G  159 (159)
T d2ldxa1          95 AGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVTNPVDILTYVV----WKISGFPVGRVIG  159 (159)
T ss_dssp             CSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECSSSHHHHHHHH----HHHHCSCTTTEEE
T ss_pred             cccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeCCcHHHHHHHH----HHHHCcCcccccC
Confidence            9999999999999999999999999999999999999999999999998764    6888999999998

>d1ojua2 d.162.1.1 (A:164-331) Lactate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.97  E-value=1e-30  Score=221.01  Aligned_cols=145  Identities=18%  Similarity=0.247  Sum_probs=128.6

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCC-cceEEeecCCCccccccccCCCCCCCChHHHHHHHHHHhcchhhhhhhhccCCccc
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDV-DVPVVGGHAGVTILPLLSQVKPPCSFTQEETEYLTNRIQNGGTEVVEAKAGAGSAT  265 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v-~~~viG~hg~~~~vp~~s~~~v~~~~~~~~~~el~~~v~~~~~~i~~~~~gkg~~~  265 (353)
                      |.|||+|||+.|++...   .++ +++|+|+||+ ++||+||.+++.+.   .+++++.+.++.++++|++   +||+|+
T Consensus         2 t~LDsaR~r~~l~~~~~---~~v~~a~ViGeHGd-s~vp~~S~~~i~g~---~~~~~i~~~v~~~g~eIi~---~kG~t~   71 (152)
T d1ojua2           2 NQLDSQRLKERLYNAGA---RNIRRAWIIGEHGD-SMFVAKSLADFDGE---VDWEAVENDVRFVAAEVIK---RKGATI   71 (152)
T ss_dssp             HHHHHHHHHHHHHHTTC---BSCCCCCEEBCSST-TCEECGGGCCCBSC---CCHHHHHHHHHTTHHHHHH---HHSSCC
T ss_pred             CccHHHHHHHHHHccCC---CCcceeEEEecCCC-ccccccccccccCc---cchhHhHHHHHHHHHHhhh---hcccee
Confidence            68999999999977654   455 8999999999 99999999998543   3567899999999999999   458999


Q ss_pred             chHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHH
Q 018618          266 LSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGS  343 (353)
Q Consensus       266 ~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~  343 (353)
                      |++|.++++++++|+.|.+   .++|++ +++|+| .+++|+|+||+||++|+ +++++ +||++|+++|++|++.|++.
T Consensus        72 ~gia~a~~~iv~aIl~d~~---~v~pvs~~l~geyG~~dv~lsvP~vig~~Gv-ei~~l-~L~~~E~~~l~~Sa~~ik~~  146 (152)
T d1ojua2          72 FGPAVAIYRMVKAVVEDTG---EIIPTSMILQGEYGIENVAVGVPAKLGKNGA-EVADI-KLSDEEIEKLRNSAKILRER  146 (152)
T ss_dssp             HHHHHHHHHHHHHHHTTCC---CEEEEEEEEESGGGCEEEEEEEEEEEETTEE-EECCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCC---CceeeeEEeccccCCCCEEEEeEEEECCCce-EEEcC-CCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999865   588997 789999 67999999999999998 58885 99999999999999999998


Q ss_pred             HHH
Q 018618          344 IQK  346 (353)
Q Consensus       344 ~~~  346 (353)
                      ++.
T Consensus       147 i~~  149 (152)
T d1ojua2         147 LEE  149 (152)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            864

>d1llda2 d.162.1.1 (A:150-319) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=99.97  E-value=1.6e-30  Score=224.76  Aligned_cols=152  Identities=17%  Similarity=0.337  Sum_probs=136.2

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-------------CCChHHHHHHHHHHhcchhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-------------SFTQEETEYLTNRIQNGGTE  253 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-------------~~~~~~~~el~~~v~~~~~~  253 (353)
                      |.||++|+++++|+++|+++++|+++|||+||+ +++|+||++++.+             .++...++++.+.++.++++
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~g~~   79 (170)
T d1llda2           1 TNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGD-SEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYK   79 (170)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEEBSSST-TCEECTTSCEETTEEGGGCCCCTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-CcccchhhcccCCCchhhhcccccccccchhhHHHHHHHHhhhhhH
Confidence            689999999999999999999999999999999 9999999998632             23455678999999999999


Q ss_pred             hhhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHH
Q 018618          254 VVEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERI  331 (353)
Q Consensus       254 i~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~  331 (353)
                      |++   +||++.|++|.++++++++|+.+..   .+++++ +++|+| ++++|||+||++|++|+++++++ +|+++|++
T Consensus        80 i~~---~kg~t~~~~a~~~~~~~~~i~~~~~---~~~~~~~~~~~~~g~~~i~~s~P~~lg~~Gv~~i~~l-~L~~~E~~  152 (170)
T d1llda2          80 IIN---GKGATNYAIGMSGVDIIEAVLHDTN---RILPVSSMLKDFHGISDICMSVPTLLNRQGVNNTINT-PVSDKELA  152 (170)
T ss_dssp             HHT---SCCSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECSSBTTBCSSEEEEEEEEETTEEECCSCC-CCCHHHHH
T ss_pred             HHh---hhccchhhhHHHHHHHHHHHHcCCC---ceeeeeccccCccCCCCeeEeeccEEcCCeeEEEecC-CCCHHHHH
Confidence            998   5689999999999999999998865   466665 688988 77999999999999999999996 99999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 018618          332 GLEKAKKELAGSIQK  346 (353)
Q Consensus       332 ~l~~s~~~l~~~~~~  346 (353)
                      +|++|++.||+.+++
T Consensus       153 ~l~~sa~~lk~~~~~  167 (170)
T d1llda2         153 ALKRSAETLKETAAQ  167 (170)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999999987743

>d5mdha2 d.162.1.1 (A:155-333) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.97  E-value=1.9e-30  Score=226.11  Aligned_cols=161  Identities=22%  Similarity=0.250  Sum_probs=138.6

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceE-EeecCCCccccccccCCCCCC-----------CChHHHHHHHHHHhcchhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPV-VGGHAGVTILPLLSQVKPPCS-----------FTQEETEYLTNRIQNGGTEV  254 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~v-iG~hg~~~~vp~~s~~~v~~~-----------~~~~~~~el~~~v~~~~~~i  254 (353)
                      |.||++|||+++|+++||+|++|+++| ||+||+ ++||+||++++++.           ++....+++.+.+++++..|
T Consensus         1 T~LDs~R~r~~la~~l~V~~~~V~~~vI~GeHG~-s~vp~~S~a~v~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i   79 (179)
T d5mdha2           1 TRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS-TQYPDVNHAKVKLQAKEVGVYEAVKDDSWLKGEFITTVQQRGAAV   79 (179)
T ss_dssp             CHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECTTCEEECSSCEEEHHHHHCCHHHHHTHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHHCcCHHHcEEEEEEEcCCC-cccccchhceecCcchhhhhhhccccchhhHHHHHHHHHhccHhh
Confidence            689999999999999999999997755 599999 99999999997431           22233578889999999999


Q ss_pred             hhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeC-CC--CCccEEEEEEEEcCCceEEEccCCCCCHHHH
Q 018618          255 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVAS-QV--TELPFFASKVRLGRQGAEEIFQLGPLNEYER  330 (353)
Q Consensus       255 ~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g-~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~  330 (353)
                      ++.+  ++++.|++|.|+++++++|+++.++.. +++++ +.+| +|  ++++|||+||++|++|++++.++ +||++|+
T Consensus        80 ~~~~--~~ss~~~~a~a~~~~~~~i~~~~~~~~-~~s~~v~~~g~~yGi~~~v~~s~P~~lg~~Gv~~v~~l-~L~~~E~  155 (179)
T d5mdha2          80 IKAR--KLSSAMSAAKAICDHVRDIWFGTPEGE-FVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGL-PINDFSR  155 (179)
T ss_dssp             HHHH--SSCCCHHHHHHHHHHHHHHHHCCCTTC-CEEEEEECTTCSSSCCSSCEEEEEEEEETTEEEECCCC-CCCHHHH
T ss_pred             hhcc--CcchHHHHHHHHHHHHHHHHhhcccCC-ceeEEEEccCcccCCccceEEeeeEEEcCCcEEEEeCC-CCCHHHH
Confidence            9865  467889999999999999999887653 44443 5676 57  68999999999999999999996 9999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhc
Q 018618          331 IGLEKAKKELAGSIQKGISFSK  352 (353)
Q Consensus       331 ~~l~~s~~~l~~~~~~~~~~~~  352 (353)
                      ++|++|++.|+++++.++++++
T Consensus       156 ~~l~~Sa~~L~~~~~~~~~~l~  177 (179)
T d5mdha2         156 EKMDLTAKELAEEKETAFEFLS  177 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999876

>d1a5za2 d.162.1.1 (A:164-333) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=7.2e-30  Score=220.87  Aligned_cols=156  Identities=24%  Similarity=0.364  Sum_probs=138.9

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----------CCChHHHHHHHHHHhcchhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVV  255 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----------~~~~~~~~el~~~v~~~~~~i~  255 (353)
                      |.||++||++++|+++|++|.+|+++|||+||+ +++|+||++++.+           .++.+.++++.+.++.++++++
T Consensus         2 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-t~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~   80 (172)
T d1a5za2           2 TVLDTARLRTLIAQHCGFSPRSVHVYVIGEHGD-SEVPVWSGAMIGGIPLQNMCQVCQKCDSKILENFAEKTKRAAYEII   80 (172)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHTTSSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHCcCHHHeEEEEEecCCC-CcccchhhcccCCcchhhhhhccccccHHHhhhhHHHHhccceeEe
Confidence            689999999999999999999999999999999 9999999998642           2556667899999999999998


Q ss_pred             hhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHH
Q 018618          256 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL  333 (353)
Q Consensus       256 ~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l  333 (353)
                      .   +++++.|++|.++++++.+++.+.+   .+++++ +.+|+| .+++|||+||++|++|+++++++ +||++|+++|
T Consensus        81 ~---~~~~~~~~~a~a~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~v~~s~P~~lg~~Gv~~v~~l-~Ls~~E~~~l  153 (172)
T d1a5za2          81 E---RKGATHYAIALAVADIVESIFFDEK---RVLTLSVYLEDYLGVKDLCISVPVTLGKHGVERILEL-NLNEEELEAF  153 (172)
T ss_dssp             H---HHSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEESSBTTBCSEEEEEEEEEETTEEEEECCC-CCCHHHHHHH
T ss_pred             e---ccccchhhHHHHHHHHHHHHHhhcc---cceeeecccccccccCCeeEeeeEEEcCCceEEEeCC-CCCHHHHHHH
Confidence            8   4578999999999999999998754   466665 678888 77999999999999999999996 9999999999


Q ss_pred             HHHHHHHHHHHHHhhhh
Q 018618          334 EKAKKELAGSIQKGISF  350 (353)
Q Consensus       334 ~~s~~~l~~~~~~~~~~  350 (353)
                      ++|++.|++.+++..+.
T Consensus       154 ~~sa~~lk~~i~~l~~~  170 (172)
T d1a5za2         154 RKSASILKNAINEITAE  170 (172)
T ss_dssp             HHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhhc
Confidence            99999999999886544

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=5.2e-31  Score=223.00  Aligned_cols=139  Identities=30%  Similarity=0.504  Sum_probs=120.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      |+.||+|||+ |+||+++++.|+++++ .||+|+|+++  ++|+++|++|...  ........ +.+ +++++|||+||+
T Consensus         2 p~~KI~IIGa-G~VG~~~a~~l~~~~l-~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~-~~~-~~~~~~advvvi   77 (150)
T d1t2da1           2 PKAKIVLVGS-GMIGGVMATLIVQKNL-GDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNT-YDDLAGADVVIV   77 (150)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTC-CEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECC-GGGGTTCSEEEE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhCCC-CeEEEEeccCCcceeeecchhhhccccCCCcEEEe-ccc-ccccCCCcEEEE
Confidence            4569999998 9999999999998886 5999999988  7899999999742  22222221 234 588999999999


Q ss_pred             cCCCCCCCCCC-----HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          116 PAGVPRKPGMT-----RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       116 ~ag~~~~~g~~-----r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      ++|.++++|++     |.+++..|.++++++++.+.++||+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        78 tag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivvtNPvD~~t~~~----~~~sg~p~~rViG~  149 (150)
T d1t2da1          78 TAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLL----HQHSGVPKNKIIGL  149 (150)
T ss_dssp             CCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             ecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchHHHHHHH----HHHHCCCchheecc
Confidence            99999999875     999999999999999999999999999999999999998764    78889999999996

>d1pzga2 d.162.1.1 (A:164-334) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.96  E-value=9.4e-30  Score=220.63  Aligned_cols=158  Identities=27%  Similarity=0.435  Sum_probs=135.4

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVE  256 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~  256 (353)
                      |+||++|+++++|+++|++|++|+++|||+||+ +++|+||++++.+          .....++.+.....+.++..++.
T Consensus         2 c~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-t~vp~~S~~~i~g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   80 (174)
T d1pzga2           2 CMLDSGRFRRYVADALSVSPRDVQATVIGTHGD-CMVPLVRYITVNGYPIQKFIKDGVVTEKQLEEIAEHTKVSGGEIVR   80 (174)
T ss_dssp             HHHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHhCcCHHHcEEEEEccCCC-ccccceeeeeECCEechhhccccchhhhhhhhhhheeeccceeEee
Confidence            789999999999999999999999999999999 9999999998753          12344556666666777777776


Q ss_pred             hhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618          257 AKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  334 (353)
Q Consensus       257 ~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~  334 (353)
                      .+ ++|++.|++|.++++++++|+.+.+   .+++++ +.+|+| .+++|||+||+||++|++.++++ +||++|+++|+
T Consensus        81 ~~-~~gst~~~~a~a~~~~~~~i~~~~~---~~~~~s~~~~~~yGi~~v~~s~Pv~ig~~Gi~~v~~l-~l~~~E~~~l~  155 (174)
T d1pzga2          81 FL-GQGSAYYAPAASAVAMATSFLNDEK---RVIPCSVYCNGEYGLKDMFIGLPAVIGGAGIERVIEL-ELNEEEKKQFQ  155 (174)
T ss_dssp             HH-SSSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             ee-cccchhhhhHHHHHHHHHhhcccCC---ceEEeeeccccccCCCCceeeeeeEEcCCcEEEEeCC-CCCHHHHHHHH
Confidence            55 7899999999999999999998865   577776 578998 55899999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHHHhhhhh
Q 018618          335 KAKKELAGSIQKGISFS  351 (353)
Q Consensus       335 ~s~~~l~~~~~~~~~~~  351 (353)
                      +|++.|++.. +.++.+
T Consensus       156 ~s~~~l~~~~-~~v~~l  171 (174)
T d1pzga2         156 KSVDDVMALN-KAVAAL  171 (174)
T ss_dssp             HHHHHHHHHH-HHHHHH
T ss_pred             HHHHHHHHHH-HHHHhc
Confidence            9999999755 455544

>d7mdha2 d.162.1.1 (A:198-385) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=99.96  E-value=9.6e-30  Score=222.95  Aligned_cols=158  Identities=18%  Similarity=0.152  Sum_probs=134.4

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCCCccccccccCCCCC-----CCChHH--HHHHHHHHhcchhhhhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAGVTILPLLSQVKPPC-----SFTQEE--TEYLTNRIQNGGTEVVEAK  258 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~~~~vp~~s~~~v~~-----~~~~~~--~~el~~~v~~~~~~i~~~~  258 (353)
                      |.||++|||++||+++||+|++|+ .+|||+||+ +++|+||++++.+     ...++.  ++++.+.++++++++++.+
T Consensus         1 T~LDs~R~r~~lA~~l~V~~~~V~~~iI~GeHGd-s~vp~~S~a~v~g~~l~~~~~~~~~~~~~~~~~v~~~~~~ii~~k   79 (188)
T d7mdha2           1 TRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST-TQVPDFLNAKIDGRPVKEVIKRTKWLEEEFTITVQKRGGALIQKW   79 (188)
T ss_dssp             CHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTCCCHHHHHHHHHHHHHTHHHHHHHHT
T ss_pred             CccHHHHHHHHHHHHHCcCHHHeeEEEEEEcCCC-cEeeeeeccEeeccchhhcccchhhhHHHHHHHHhhhHHHHHHhh
Confidence            689999999999999999999996 568899999 9999999999753     234444  4889999999999999965


Q ss_pred             ccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCC-C--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618          259 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQ-V--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  334 (353)
Q Consensus       259 ~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~-~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~  334 (353)
                        ++++.+|+|.|+++++++|+.+.+.. .+++++ +++|+ |  ++|+|||+||++|++|+++++...+||++|+++|+
T Consensus        80 --g~s~~~s~A~A~~~~~~ai~~~~~~~-~~~s~~v~~~g~~YGi~~~v~~s~Pv~ig~~G~~~iv~~l~L~~~e~~~l~  156 (188)
T d7mdha2          80 --GRSSAASTAVSIADAIKSLVTPTPEG-DWFSTGVYTTGNPYGIAEDIVFSMPCRSKGDGDYELATDVSNDDFLWERIK  156 (188)
T ss_dssp             --SSCCHHHHHHHHHHHHHHHHSCCCTT-CCEEEEEECTTCSSCCCSSSEEEEEEECCSSSCCEECCCCCCCHHHHHHHH
T ss_pred             --cccchhhHHHHHHHHHHHHHcCCCCC-ceEEEEEEeCCCccCCCCCeEEEEeeEECCCccEEEeCCCCCCHHHHHHHH
Confidence              34556679999999999999998754 355665 67885 8  57999999999999999999864599999999999


Q ss_pred             HHHHHHHHHHHHhh
Q 018618          335 KAKKELAGSIQKGI  348 (353)
Q Consensus       335 ~s~~~l~~~~~~~~  348 (353)
                      +|+++|+++.+...
T Consensus       157 ~S~~eL~~e~~~v~  170 (188)
T d7mdha2         157 KSEAELLAEKKCVA  170 (188)
T ss_dssp             HHHHHHHHHHHHTH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999998876554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=99.96  E-value=9.2e-31  Score=222.67  Aligned_cols=138  Identities=34%  Similarity=0.594  Sum_probs=121.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC----CCeEEEEeCCCchhhhhCCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      +++||+|||| |.||+++|+.|++.++. ||+|+|+++  ++|+++|+.|...    ...+..   +++++++++|||+|
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~-el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~~~~~~~adiV   80 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELA-DVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA---EYSYEAALTGADCV   80 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCC-EEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE---ECSHHHHHTTCSEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCc-eEEEEEeccccchhHHHHHhhhccccCCeeEEec---cCchhhhhcCCCeE
Confidence            4569999998 99999999999988864 999999988  7899999999642    122332   46778899999999


Q ss_pred             EEcCCCCCCCCC-----CHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          114 IIPAGVPRKPGM-----TRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       114 Ii~ag~~~~~g~-----~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      |+++|.++++|+     +|.+++..|+++++++++.+.++||+++++++|||+|++|+++    ++.+|||++||||+
T Consensus        81 vitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivsNPvd~lt~~~----~~~sg~p~~rViG~  154 (154)
T d1pzga1          81 IVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTNPLDCMVKVM----CEASGVPTNMICGM  154 (154)
T ss_dssp             EECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCSSHHHHHHHH----HHHHCCCGGGEEEC
T ss_pred             EEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeCCcHHHHHHHH----HHHhCcChhcEecC
Confidence            999999999985     8999999999999999999999999999999999999998765    67789999999996

>d1y6ja2 d.162.1.1 (A:149-317) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=99.96  E-value=2.5e-30  Score=223.28  Aligned_cols=153  Identities=19%  Similarity=0.336  Sum_probs=135.2

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----C--------CChHHHHHHHHHHhcchhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S--------FTQEETEYLTNRIQNGGTEV  254 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~--------~~~~~~~el~~~v~~~~~~i  254 (353)
                      |.||++||++++|+++|++|++|+++|||+||+ +++|+||++++++    .        ++.++++++.+++++.++++
T Consensus         1 T~LDs~R~~~~la~~lgv~~~~V~~~ViG~Hg~-t~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   79 (169)
T d1y6ja2           1 TVLDSIRFRYLLSEKLGVDVKNVHGYIIGEHGD-SQLPLWSCTHIAGKNINEYIDDPKCNFTEEDKKKIAEDVKTAGATI   79 (169)
T ss_dssp             THHHHHHHHHHHHTTTTCCTTTEECCEEBCSSS-SCEECCTTCEETTBCSCCC-----------CCHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHceEEEEccCCC-CCccCeeecccCchhHHHHHHHhhhhhhHHHHHHHHHHHhhhhhhh
Confidence            689999999999999999999999999999999 9999999998642    1        22334578999999988898


Q ss_pred             hhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHH
Q 018618          255 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIG  332 (353)
Q Consensus       255 ~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~  332 (353)
                      +.   +++++.|++|.++++++++++.+.+   .++|++ +++|+| .+++|||+||++|++|+++++++ +||++||++
T Consensus        80 ~~---~~~s~~~a~a~~~~~~~~~i~~~~~---~~~~~~~~~~g~yg~~~i~~s~Pv~lg~~Gv~~i~~l-~Ls~~E~~~  152 (169)
T d1y6ja2          80 IK---NKGATYYGIAVSINTIVETLLKNQN---TIRTVGTVINGMYGIEDVAISLPSIVNSEGVQEVLQF-NLTPEEEEA  152 (169)
T ss_dssp             HH---HTSCCCHHHHHHHHHHHHHHHHTCC---CEECCEEEECSBTTBCSEEEECCEEEETTEEEECCCC-CCCHHHHHH
T ss_pred             hh---hhhhhhhHHHHHHHHHHHHhccCCC---CceeeeeeeccccCCcccceeeeeEEcCCcEEEEecC-CCCHHHHHH
Confidence            88   5689999999999999999999865   477776 789999 66999999999999999999996 999999999


Q ss_pred             HHHHHHHHHHHHHHh
Q 018618          333 LEKAKKELAGSIQKG  347 (353)
Q Consensus       333 l~~s~~~l~~~~~~~  347 (353)
                      |++|++.|++.+++.
T Consensus       153 l~~s~~~lk~~~~~v  167 (169)
T d1y6ja2         153 LRFSAEQVKKVLNEV  167 (169)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998874

>d1t2da2 d.162.1.1 (A:151-315) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=1.8e-29  Score=217.10  Aligned_cols=151  Identities=26%  Similarity=0.384  Sum_probs=135.5

Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----------CCChHHHHHHHHHHhcchhhhhhh
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----------SFTQEETEYLTNRIQNGGTEVVEA  257 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----------~~~~~~~~el~~~v~~~~~~i~~~  257 (353)
                      .||++|+++++|+++|++|++|+++|||+||+ +++|+||++++.+          ...+++++++.+.++++++++++ 
T Consensus         2 ~LD~~R~~~~la~~lgv~~~~V~~~ViG~Hg~-~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-   79 (165)
T d1t2da2           2 VLDTSRLKYYISQKLNVCPRDVNAHIVGAHGN-KMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVN-   79 (165)
T ss_dssp             HHHHHHHHHHHHHHHTSCGGGEECCEEBCSST-TCEECGGGCEETTEEHHHHHHTTSSCHHHHHHHHHHHHTHHHHHHH-
T ss_pred             ccHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-CcccceeecccCCcchhhhcccchhhhhhhhhhhhhhhhhhHHHhh-
Confidence            58999999999999999999999999999999 9999999987632          34556778899999999999988 


Q ss_pred             hccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018618          258 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  335 (353)
Q Consensus       258 ~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~  335 (353)
                        +++++.|++|.+++.++++++.+.+   .+++++ +++|+| .+++|||+||++|++|+++++++ +||++||++|++
T Consensus        80 --~~~~~~~a~a~a~~~~~~~i~~~~~---~~~~~~v~~~g~yg~~~v~~s~Pv~lg~~Gv~~i~~l-~L~~~E~~~L~~  153 (165)
T d1t2da2          80 --LHASPYVAPAAAIIEMAESYLKDLK---KVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIEL-QLNSEEKAKFDE  153 (165)
T ss_dssp             --HTSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHH
T ss_pred             --hccceeechhHHHHHHHHHHhhccc---cceeeeeccccccccCCeeEeeeEEEcCCceEEEeCC-CCCHHHHHHHHH
Confidence              5689999999999999999999875   467665 789999 77999999999999999999996 999999999999


Q ss_pred             HHHHHHHHHHH
Q 018618          336 AKKELAGSIQK  346 (353)
Q Consensus       336 s~~~l~~~~~~  346 (353)
                      |+++|++..+.
T Consensus       154 s~~~lk~~~~~  164 (165)
T d1t2da2         154 AIAETKRMKAL  164 (165)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHhc
Confidence            99999987664

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=99.96  E-value=1.1e-29  Score=213.22  Aligned_cols=134  Identities=28%  Similarity=0.530  Sum_probs=111.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC----CCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT----GAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~----~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      +||+|||+ |+||+++|+.|+++++. |++|+|+++  +++.++|+.|...    ...+..   ++|+ ++++|||+||+
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~-dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~---~~d~-~~~~~advvvi   75 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELG-DIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTG---TNNY-ADTANSDVIVV   75 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCS-EEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE---ESCG-GGGTTCSEEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcc-eEEEEeeccccchhHHHHhhccccccCCCCEEEe---cCcH-HHhcCCCEEEE
Confidence            49999998 99999999999998875 899999988  7899999999852    223443   3575 67999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      ++|.|+++|++|.+++..|+++++++++.|.+++|+++++++|||+|++|+++    ++.+|||++||||
T Consensus        76 tag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivvtNPvDv~t~~~----~~~sglp~~rViG  141 (142)
T d1uxja1          76 TSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVNNPLDAMTYLA----AEVSGFPKERVIG  141 (142)
T ss_dssp             CCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEECSSSHHHHHHHH----HHHHCCCGGGEEE
T ss_pred             eeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEeCCchHHHHHHH----HHHHCcCcccccC
Confidence            99999999999999999999999999999999999999999999999998875    6778999999998

>d1o6za2 d.162.1.1 (A:163-330) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=99.96  E-value=6.1e-29  Score=212.27  Aligned_cols=154  Identities=25%  Similarity=0.392  Sum_probs=136.8

Q ss_pred             EeechhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC---CCChHHHHHHHHHHhcchhhhhhhhcc
Q 018618          184 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC---SFTQEETEYLTNRIQNGGTEVVEAKAG  260 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~---~~~~~~~~el~~~v~~~~~~i~~~~~g  260 (353)
                      || |.||++|+++++|+++|+++++|+++|||+||+ +++|+||++++..   ....++++++.+.++..+.++++   +
T Consensus         1 ~G-t~LD~~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~v~~~s~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~   75 (161)
T d1o6za2           1 FG-GRLDSARFRYVLSEEFDAPVQNVEGTILGEHGD-AQVPVFSKVSVDGTDPEFSGDEKEQLLGDLQESAMDVIE---R   75 (161)
T ss_dssp             CC-HHHHHHHHHHHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTBCCCCCHHHHHHHHHHHHHHHHHHHT---T
T ss_pred             CC-chHHHHHHHHHHHHHHCcCHHHeEEEEEeCCCC-ceeeehhhhcccccccccchHHHHHHHHHhhhhHHHHHH---h
Confidence            46 899999999999999999999999999999999 9999999998642   35566778888999999999877   5


Q ss_pred             CCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHH
Q 018618          261 AGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKK  338 (353)
Q Consensus       261 kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~  338 (353)
                      ++++.+++|.++++++.+++.+...   +++++ +++++| +++++||+||++|++|+++++++ +||++|+++|++|++
T Consensus        76 ~~~s~~~~a~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~S~Pv~ig~~Gv~~v~~l-~l~~~E~~~L~~s~~  151 (161)
T d1o6za2          76 KGATEWGPARGVAHMVEAILHDTGE---VLPASVKLEGEFGHEDTAFGVPVSLGSNGVEEIVEW-DLDDYEQDLMADAAE  151 (161)
T ss_dssp             TSSCCHHHHHHHHHHHHHHHTTCCC---EEEEEEEEESGGGCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHhhHhhhHhhhhcccc---ceeecccccccccccCceeeeeeEEcCCCEEEEeCC-CCCHHHHHHHHHHHH
Confidence            6889999999999999999988653   55554 688888 77999999999999999999996 999999999999999


Q ss_pred             HHHHHHHH
Q 018618          339 ELAGSIQK  346 (353)
Q Consensus       339 ~l~~~~~~  346 (353)
                      .|++.+++
T Consensus       152 ~L~~~~~~  159 (161)
T d1o6za2         152 KLSDQYDK  159 (161)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            99999875

>d1hyea2 d.162.1.1 (A:146-313) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.96  E-value=2.3e-29  Score=216.89  Aligned_cols=155  Identities=19%  Similarity=0.348  Sum_probs=129.1

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----CC-C--hHHHHHHHHHHhcchhhhhhhhc
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----SF-T--QEETEYLTNRIQNGGTEVVEAKA  259 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~~-~--~~~~~el~~~v~~~~~~i~~~~~  259 (353)
                      |.||++||++++|+++|+++++|+++|||+||+ +++|+||++++.+    .+ .  ...++++.+.++++++.++.   
T Consensus         3 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   78 (168)
T d1hyea2           3 THLDSLRFKVAIAKFFGVHIDEVRTRIIGEHGD-SMVPLLSATSIGGIPIQKFERFKELPIDEIIEDVKTKGEQIIR---   78 (168)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGEECCEEECSST-TEEECGGGCEETTEEGGGCGGGGGCCHHHHHHHHHHHTTSCCC---
T ss_pred             chHHHHHHHHHHHHHHCcCHHHeEEEEEcCCCC-ccccchhheeECCEecccccccchhhhhhHHHHHhhhHHHHHH---
Confidence            789999999999999999999999999999999 9999999998743    11 1  12357788888888888877   


Q ss_pred             cCCcccchHHHHHHHHHHHHHhccCCCCeEEEe-eeeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHH
Q 018618          260 GAGSATLSMAYAAVKFADACLRGLRGDAGVVEC-AFVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA  336 (353)
Q Consensus       260 gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~-~~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s  336 (353)
                      .++++.|++|.+++.++++++.+.+   .++++ +++.|+|  ++++|||+||++|++|+++++++ +||++|+++|++|
T Consensus        79 ~k~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~s~Pv~lg~~Gv~~i~~l-~Ls~~E~~~l~~S  154 (168)
T d1hyea2          79 LKGGSEFGPAAAILNVVRCIVNNEK---RLLTLSAYVDGEFDGIRDVCIGVPVKIGRDGIEEVVSI-ELDKDEIIAFRKS  154 (168)
T ss_dssp             ------CCHHHHHHHHHHHHHTTCC---EEEEEEEEEESSSSSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHH
T ss_pred             hccCccccchhhhhHHHHhhhccCC---CeEEEEEEEecccCCcCCEEEeeceEEcCCcEEEEecC-CCCHHHHHHHHHH
Confidence            4578889999999999999998865   35555 4677775  77999999999999999999996 9999999999999


Q ss_pred             HHHHHHHHHHhhh
Q 018618          337 KKELAGSIQKGIS  349 (353)
Q Consensus       337 ~~~l~~~~~~~~~  349 (353)
                      ++.|++.+++..+
T Consensus       155 a~~lk~~~~~~k~  167 (168)
T d1hyea2         155 AEIIKKYCEEVKN  167 (168)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999988754

>d1hyha2 d.162.1.1 (A:167-329) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=99.96  E-value=5.2e-29  Score=213.65  Aligned_cols=154  Identities=19%  Similarity=0.249  Sum_probs=133.2

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----CCC--hHHHHHHHHHHhcchhhhhhhhc
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----SFT--QEETEYLTNRIQNGGTEVVEAKA  259 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----~~~--~~~~~el~~~v~~~~~~i~~~~~  259 (353)
                      |.||++||++++|+++|++|++|+++|||+||+ +++|+||++++++     ...  +.+++++.+.+++++++|++.  
T Consensus         2 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~v~g~~~~~~~~~~~~~~~~i~~~v~~~~~~i~~~--   78 (163)
T d1hyha2           2 TLLDTARMQRAVGEAFDLDPRSVSGYNLGEHGN-SQFVAWSTVRVMGQPIVTLADAGDIDLAAIEEEARKGGFTVLNG--   78 (163)
T ss_dssp             THHHHHHHHHHHHHHHTCCGGGCBCCEEBCTTT-TCEECTTTCEETTEEGGGC-----CCHHHHHHHHHHHHHHHHHH--
T ss_pred             CchHHHHHHHHHHHHhCcCHHHeEEEEEcCCCC-cCccceeccccCCchHHHHhccccchHHHHHHHHhhhHHHHHHH--
Confidence            689999999999999999999999999999999 9999999998753     122  234689999999999999884  


Q ss_pred             cCCcccchHHHHHHHHHHHHHhccCCCCeEEEeeeeeCCCCCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHH
Q 018618          260 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECAFVASQVTELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKE  339 (353)
Q Consensus       260 gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~~~~g~~~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~  339 (353)
                       ||++.|++|.++..+++++..+..   .+++++...+  ++++|||+||++|++|+++++++ +|+++||++|++|++.
T Consensus        79 -kg~~~~~~a~~~~~~~~~~~~~~~---~~~~~s~~~~--~~~~~~s~Pv~ig~~Gv~~v~~l-~Ls~~E~~~l~~s~~~  151 (163)
T d1hyha2          79 -KGYTSYGVATSAIRIAKAVMADAH---AELVVSNRRD--DMGMYLSYPAIIGRDGVLAETTL-DLTTDEQEKLLQSRDY  151 (163)
T ss_dssp             -HSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECT--TTCSEEEEEEEEETTEEEEECCC-CCCHHHHHHHHHHHHH
T ss_pred             -HHhHHHhHHHHhhHHHHHhcCCcc---ceeeeceecC--CcceEEEeEEEEcCCeEEEEecC-CCCHHHHHHHHHHHHH
Confidence             588999999999999999998865   4555553211  45899999999999999999996 9999999999999999


Q ss_pred             HHHHHHHhhhh
Q 018618          340 LAGSIQKGISF  350 (353)
Q Consensus       340 l~~~~~~~~~~  350 (353)
                      |++.++++++.
T Consensus       152 l~~~~~~~~~~  162 (163)
T d1hyha2         152 IQQRFDEIVDT  162 (163)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHhh
Confidence            99999998875

>d1ldna2 d.162.1.1 (A:163-330) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.96  E-value=3.3e-29  Score=215.61  Aligned_cols=154  Identities=18%  Similarity=0.352  Sum_probs=134.4

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC----C-------CChHHHHHHHHHHhcchhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC----S-------FTQEETEYLTNRIQNGGTEVV  255 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~----~-------~~~~~~~el~~~v~~~~~~i~  255 (353)
                      |.||++||+.++|+++|+++++|+++|||+||+ +++|+||++++++    .       .....++++.+.++..+..+.
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~   79 (168)
T d1ldna2           1 TILDTARFRFLLGEYFSVAPQNVHAYIIGEHGD-TELPVWSQAYIGVMPIRKLVESKGEEAQKDLERIFVNVRDAAYQII   79 (168)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGEEEEEEBCSST-TCEEEEEEEEETTEESTTTSGGGTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccHHHHHHHHHHHHhCcCHHHeEEEEEcCCCC-ccccchhhcccCCcchhhhhhhhhhhhccchhhhhhhhhhhHHHHH
Confidence            689999999999999999999999999999999 9999999998743    1       112235678888888888887


Q ss_pred             hhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHH
Q 018618          256 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL  333 (353)
Q Consensus       256 ~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l  333 (353)
                      ..   ++++.|+++.++.+++++++.+..   .+++++ +++++| ++++|||+||++|++|+.+++++ +||++|+++|
T Consensus        80 ~~---~~~s~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~yg~~~v~~s~Pv~lg~~Gv~~v~~l-~Ls~~E~~~L  152 (168)
T d1ldna2          80 EK---KGATYYGIAMGLARVTRAILHNEN---AILTVSAYLDGLYGERDVYIGVPAVINRNGIREVIEI-ELNDDEKNRF  152 (168)
T ss_dssp             HH---HSCCCHHHHHHHHHHHHHHHTTCC---EEEEEEEEEESTTSCEEEEEEEEEEEETTEEEEECCC-CCCHHHHHHH
T ss_pred             Hh---hccccchHHHHHhhHHHhhhcccc---eeeeeeeeeccccCCCCeeecceEEEcCCeEEEEeCC-CCCHHHHHHH
Confidence            74   478999999999999999998754   477765 678888 77999999999999999999996 9999999999


Q ss_pred             HHHHHHHHHHHHHhh
Q 018618          334 EKAKKELAGSIQKGI  348 (353)
Q Consensus       334 ~~s~~~l~~~~~~~~  348 (353)
                      ++|++.|++.+++++
T Consensus       153 ~~s~~~lk~~i~~a~  167 (168)
T d1ldna2         153 HHSAATLKSVLARAF  167 (168)
T ss_dssp             HHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHc
Confidence            999999999999875

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=99.96  E-value=5.5e-29  Score=215.67  Aligned_cols=144  Identities=22%  Similarity=0.306  Sum_probs=123.9

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCC-----cEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~-----~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~  109 (353)
                      +++.||+|+||+|+||+++++.|++++++     .+|+|+|++.    +++.++|+.|+.... ++....+++.+++++|
T Consensus        22 k~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~-~~~~~~~~~~~~~~~~  100 (175)
T d7mdha1          22 KKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPL-LREVSIGIDPYEVFED  100 (175)
T ss_dssp             CCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT-EEEEEEESCHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccccccc-ccCccccccchhhccC
Confidence            45679999999899999999999987653     4899999877    578899999987533 3332234566899999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      ||+||+++|.|+++||+|.|++..|.++++++++.|.+||| +++|+++|||+|++|+++   .+.++++|++||+||
T Consensus       101 aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~NPvd~~t~ia---~k~a~~ip~~~i~~m  175 (175)
T d7mdha1         101 VDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC---LKNAPDIPAKNFHAL  175 (175)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH---HHTCTTSCGGGEEEC
T ss_pred             CceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEecCcHHHHHHHH---HHHCCCCCHHHEeCC
Confidence            99999999999999999999999999999999999999996 899999999999998875   244799999999986

>d1i0za2 d.162.1.1 (A:161-332) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=99.96  E-value=5.5e-29  Score=215.19  Aligned_cols=151  Identities=18%  Similarity=0.249  Sum_probs=133.2

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC------------CCChHHHHHHHHHHhcchhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC------------SFTQEETEYLTNRIQNGGTEV  254 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~------------~~~~~~~~el~~~v~~~~~~i  254 (353)
                      |.||++|+++++|+++|+++++|+++|||+||+ +++|+||++++++            ....+.++++.+.++.++.++
T Consensus         3 T~LDs~R~~~~lA~~lgv~~~~V~~~ViG~Hg~-~~vp~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   81 (172)
T d1i0za2           3 CNLDSARFRYLMAEKLGIHPSSCHGWILGEHGD-SSVAVWSGVNVAGVSLQELNPEMGTDNDSENWKEVHKMVVESAYEV   81 (172)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGCBCCEEBCSST-TCEECGGGCEETTEEHHHHCTTTTSSSCSSCTHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHhCcCHHHceEEEEccCCC-cccccHhhceeCCeeHHHhhhhhccchhHHHHHHHHHHhccceEEe
Confidence            789999999999999999999999999999999 9999999998743            122344678889999999998


Q ss_pred             hhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHH
Q 018618          255 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERI  331 (353)
Q Consensus       255 ~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~  331 (353)
                      +.   +++++.|++|.++++++++++.+.+   .+++++ +++|+|  ++++|||+||++|++|+++++++ +||++|++
T Consensus        82 ~~---~~~~s~~a~a~~~~~~~~~~~~~~~---~v~~~~~~~~g~YGi~~~i~~s~Pv~lg~~Gv~~v~~l-~L~~~E~~  154 (172)
T d1i0za2          82 IK---LKGYTNWAIGLSVADLIESMLKNLS---RIHPVSTMVKGMYGIENEVFLSLPCILNARGLTSVINQ-KLKDDEVA  154 (172)
T ss_dssp             HH---HHSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCC-CCCHHHHH
T ss_pred             ee---cccccchHHHHHHHHHHHHHhcCCC---cccccceeccCcCCCcCCEEEEEEEEecCCcEEEEeCC-CCCHHHHH
Confidence            88   4578999999999999999998754   588887 689998  56999999999999999999996 99999999


Q ss_pred             HHHHHHHHHHHHHH
Q 018618          332 GLEKAKKELAGSIQ  345 (353)
Q Consensus       332 ~l~~s~~~l~~~~~  345 (353)
                      +|++|++.|++..+
T Consensus       155 ~l~~Sa~~l~~~~~  168 (172)
T d1i0za2         155 QLKKSADTLWDIQK  168 (172)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999986543

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.96  E-value=3.9e-29  Score=212.66  Aligned_cols=143  Identities=22%  Similarity=0.352  Sum_probs=119.0

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCC-----cEEEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLV-----SVLHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~-----~el~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~  109 (353)
                      ++|+||+||||+|+||+++++.|++++++     .+|+|+|+++    ++++.+|+.++......... .+.+.+++++|
T Consensus         1 s~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~   79 (154)
T d5mdha1           1 SEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI-ATDKEEIAFKD   79 (154)
T ss_dssp             CCCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE-EESCHHHHTTT
T ss_pred             CCceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccc-cCcccccccCC
Confidence            46899999998899999999999887653     5899999987    34556666776543222222 23456799999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-cEEEEecCCCCchhHHHHHHHHHhC-CCCCCceEee
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLISNPVNSTVPIAAEVFKKAG-TYDPKKLLGV  186 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv~tNPv~~~t~~~~~~~~~~~-~~~~~kviG~  186 (353)
                      ||+||+++|.|+++|++|.|++..|.++++++++.|.++||+ +++|++|||+|++|+++    ++.+ |+|++||+|+
T Consensus        80 ~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvsNPvD~mt~v~----~k~s~g~P~~~v~~m  154 (154)
T d5mdha1          80 LDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTA----SKSAPSIPKENFSCL  154 (154)
T ss_dssp             CSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH----HHTCTTSCGGGEEEC
T ss_pred             ceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEecCcHHHHHHHH----HHHcCCCCHHHEeCC
Confidence            999999999999999999999999999999999999999985 57889999999998765    6666 9999999986

>d1ldma2 d.162.1.1 (A:161-329) Lactate dehydrogenase {Dogfish (Squalus acanthias) [TaxId: 7797]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Dogfish (Squalus acanthias) [TaxId: 7797]

Probab=99.96  E-value=6.6e-29  Score=214.01  Aligned_cols=155  Identities=20%  Similarity=0.301  Sum_probs=130.9

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC---------CCChHHHHHHHHHHhcchhhhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC---------SFTQEETEYLTNRIQNGGTEVVEA  257 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~---------~~~~~~~~el~~~v~~~~~~i~~~  257 (353)
                      |.||++||++++|+++|++|++|+++|||+||+ +++|+||++++..         ......+.++...++.++..+.. 
T Consensus         3 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~v~~~s~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   80 (169)
T d1ldma2           3 CNLDSARFRYLMGERLGVHSCSCHGWVIGEHGD-SVPSVWSGMNVASIKLHPLDGTNKDKQDWKKLHKDVVDSAYEVIK-   80 (169)
T ss_dssp             THHHHHHHHHHHHHHHTSCGGGCBCCBCBCSST-TCCBCGGGCEETTEESHHHHSSTTTTTTTTHHHHHHHHHHHHHHH-
T ss_pred             chHHHHHHHHHHHHHHCcCHHHeEEEEEcCCCc-cchhhhhhcccCCcchHHhhcccchhhhcceeEEEecCceEEEec-
Confidence            789999999999999999999999999999999 9999999998743         11222334555566666666665 


Q ss_pred             hccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHH
Q 018618          258 KAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLE  334 (353)
Q Consensus       258 ~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~  334 (353)
                        +++++.|++|.++++++++++.+.+   .+++++ +++|+|  ++++|||+||++|++|+++++++ +||++|+++|+
T Consensus        81 --~~~s~~~a~a~~~~~~~~~~~~~~~---~~~~~~~~~~g~ygi~~~i~~s~Pv~lg~~Gv~~v~~l-~L~~~E~~~l~  154 (169)
T d1ldma2          81 --LKGYTSWAIGLSVADLAETIMKNLC---RVHPVSTMVKDFYGIKDNVFLSLPCVLNDHGISNIVKM-KLKPNEEQQLQ  154 (169)
T ss_dssp             --HHSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTSTTCCSCCEEEEEEEEETTEEEEECCC-CCCHHHHHHHH
T ss_pred             --cccchhhHHHHHHhhhhheecCCCC---ceeeeeeecccccCCcCCceEEeeEEEcCCcEEEEecC-CCCHHHHHHHH
Confidence              4578999999999999999998865   477776 689998  56899999999999999999996 99999999999


Q ss_pred             HHHHHHHHHHHHhhhh
Q 018618          335 KAKKELAGSIQKGISF  350 (353)
Q Consensus       335 ~s~~~l~~~~~~~~~~  350 (353)
                      +|++.|+ ++.++++|
T Consensus       155 ~s~~~l~-~~~k~lkf  169 (169)
T d1ldma2         155 KSATTLW-DIQKDLKF  169 (169)
T ss_dssp             HHHHHHH-HHHHTCCC
T ss_pred             HHHHHHH-HHHHhcCC
Confidence            9999998 56677765

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=1.1e-28  Score=209.72  Aligned_cols=143  Identities=26%  Similarity=0.460  Sum_probs=119.6

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcE-----EEEEeCCC----cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSV-----LHLYDVVN----TPGVTADISHMDTGAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~e-----l~L~D~~~----~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~  109 (353)
                      ++|+||+||||+|+||+++++.|++++++++     +.|+|.+.    ..+.++|+.++.. +..+.+..+++.+++++|
T Consensus         2 ~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (154)
T d1y7ta1           2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF-PLLAGLEATDDPKVAFKD   80 (154)
T ss_dssp             CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEESCHHHHTTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcccc-ccccccccCCchhhhccc
Confidence            3678999999889999999999999887643     56666654    5677888888764 333332223455799999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      ||+||+++|.++++|++|.|++..|+++++++++.+.+|+| +++++++|||+|++|+++   +++++|||++||++
T Consensus        81 advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsNPvDv~t~~a---~k~asg~p~~rvia  154 (154)
T d1y7ta1          81 ADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIA---YKNAPGLNPRNFTA  154 (154)
T ss_dssp             CSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH---HHTCTTSCGGGEEE
T ss_pred             ccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecCcHHHHHHHH---HHHcCCCcHHhccC
Confidence            99999999999999999999999999999999999999995 799999999999999875   24469999999984

>d1llca2 d.162.1.1 (A:165-334) Lactate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=99.95  E-value=3.1e-30  Score=223.26  Aligned_cols=157  Identities=19%  Similarity=0.352  Sum_probs=137.3

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-----------CCChHHHHHHHHHHhcchhhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-----------SFTQEETEYLTNRIQNGGTEVV  255 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-----------~~~~~~~~el~~~v~~~~~~i~  255 (353)
                      |.||++|+++++|+++|+++++|+++|||+||+ +++|+||++++.+           .+....++++.+.++.++++++
T Consensus         1 T~LDs~R~~~~lA~~l~v~~~~V~~~ViG~Hg~-~~vp~~s~~~i~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~i~   79 (172)
T d1llca2           1 TSLDTARFRQSIAEMVNVDARSVHAYIMGEHGD-TEFPVWSHANIGGVTIAEWVKAHPEIKEDKLVKMFEDVRDAAYEII   79 (172)
T ss_dssp             THHHHHHHHHHHHHHSCCCTTSCEEEEEBSSSS-SCEEEEEEEESTTCCSSSSSSCSCSSSSSSSSTTTTTTGGGTTTTS
T ss_pred             CchHHHHHHHHHHHHhCcCHHHeEEEEEcCCCC-cceeeeeccccCCccHHHHHhhhhccchhHHHHHHHhhcchHHHHH
Confidence            689999999999999999999999999999999 9999999988632           1122334677788888889988


Q ss_pred             hhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC-CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHH
Q 018618          256 EAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV-TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGL  333 (353)
Q Consensus       256 ~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~-~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l  333 (353)
                      +   ++|++.|++|.++++++++++.+..   .+++++ +++|+| .+++|||+||++|++|+++++++ +||++||++|
T Consensus        80 ~---~kg~~~~a~a~~~~~~~~~~~~~~~---~~~~~~~~~~g~ygi~~~~~s~P~~lg~~Gv~~i~~l-~L~~~E~~~l  152 (172)
T d1llca2          80 K---LKGATFYGIATALARISKAILNDEN---AVLPLSVYMDGQYGINDLYIGTPAVINRNGIQNILEI-PLTDHEEESM  152 (172)
T ss_dssp             S---SSSCTTHHHHHHHHHHHHHHHHTCC---CCEECCCCCSSSSSCCSSCCBCEEEEETTEEEEECCC-CCTTHHHHHH
T ss_pred             H---hhhhhhhhhHHHHHHHHHHHhcCCC---CccceeeeecCccCcccceEEEEEEEcCCceEEEecC-CCCHHHHHHH
Confidence            7   6789999999999999999999875   366665 789999 67899999999999999999996 9999999999


Q ss_pred             HHHHHHHHHHHHHhhhhh
Q 018618          334 EKAKKELAGSIQKGISFS  351 (353)
Q Consensus       334 ~~s~~~l~~~~~~~~~~~  351 (353)
                      ++|++.|++.++++++-.
T Consensus       153 ~~s~~~lk~~i~~~~~~~  170 (172)
T d1llca2         153 QKSASQLKKVLTDAFAKN  170 (172)
T ss_dssp             HTTTTTTTTTTTTTCCCC
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999998887644

>d2ldxa2 d.162.1.1 (A:160-331) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=1.2e-27  Score=206.47  Aligned_cols=154  Identities=22%  Similarity=0.346  Sum_probs=130.6

Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEeecCCCccccccccCCCCC-C-----------CChHHHHHHHHHHhcchhhh
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVGGHAGVTILPLLSQVKPPC-S-----------FTQEETEYLTNRIQNGGTEV  254 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG~hg~~~~vp~~s~~~v~~-~-----------~~~~~~~el~~~v~~~~~~i  254 (353)
                      |.||++|+++++|+++|++|++|+++|||+||+ +++|+||++++++ .           ......+++...++..+..+
T Consensus         3 T~LD~~R~~~~vA~~l~v~~~~V~~~ViG~Hs~-~~ip~~s~~~v~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~   81 (172)
T d2ldxa2           3 CNLDSARFRYLIGEKLGVNPTSCHGWVLGEHGD-SSVPIWSGVNVAGVTLKSLNPAIGTDKNKQHWKNVHKQVVEGGYEV   81 (172)
T ss_dssp             THHHHHHHHHHHHHHHTCCTTSSCCCEEECSSS-CEEECGGGCBSSCSSSSBSTTTCSCSSSSSSCHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhCcCHHHcEEEEEcCCCC-ccccceecceecCcchhhHHHHhhhhhhhhhhhhhhhhhccceeeh
Confidence            689999999999999999999999999999999 9999999998742 1           11223467777777777777


Q ss_pred             hhhhccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHH
Q 018618          255 VEAKAGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERI  331 (353)
Q Consensus       255 ~~~~~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~  331 (353)
                      +.   +++++.+++|.++..++.+++.+.+   .+++++ +++|+|  ++++|||+||++|++|+++++++ +||++|++
T Consensus        82 ~~---~k~~s~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~g~ygi~~~i~~s~Pv~ig~~Gv~~v~~l-~L~~~E~~  154 (172)
T d2ldxa2          82 LD---MKGYTSWAIGLSVTDLARSILKNLK---RVHPVTTLVKGFHGIKEEVFLSIPCVLGESGITDFVKV-NMTAEEEG  154 (172)
T ss_dssp             HH---HHSSCCHHHHHHHHHHHHHHHTTCC---EEEEEEEECTTSTTCCSSCEEEEEEEEETTEEEEEECC-CCCHHHHH
T ss_pred             hh---cccchhHHHHHHHhHHHHhhcCCCc---cceeeeeecccccCCcCCeEEEEEEEEcCCCEEEEecC-CCCHHHHH
Confidence            76   4578999999999999999998754   477776 578998  57999999999999999999996 99999999


Q ss_pred             HHHHHHHHHHHHHHHhhh
Q 018618          332 GLEKAKKELAGSIQKGIS  349 (353)
Q Consensus       332 ~l~~s~~~l~~~~~~~~~  349 (353)
                      +|++|++.|++ +.+.++
T Consensus       155 ~l~~s~~~lk~-~~k~l~  171 (172)
T d2ldxa2         155 LLKKSADTLWN-MQKNLE  171 (172)
T ss_dssp             HHHHHHHHHHH-HTSCSC
T ss_pred             HHHHHHHHHHH-HHHhcC
Confidence            99999999985 445443

>d1y7ta2 d.162.1.1 (A:154-332) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=7.6e-27  Score=201.91  Aligned_cols=158  Identities=21%  Similarity=0.215  Sum_probs=126.0

Q ss_pred             echhhHHHHHHHHHHHhCCCCCCCcce-EEeecCCCccccccccCCCCC----CC-ChHH-HHHHHHHHhcchhhhhhhh
Q 018618          186 VTMLDVVRANTFVAEVLGLDPRDVDVP-VVGGHAGVTILPLLSQVKPPC----SF-TQEE-TEYLTNRIQNGGTEVVEAK  258 (353)
Q Consensus       186 ~t~ld~~R~~~~lA~~l~v~~~~v~~~-viG~hg~~~~vp~~s~~~v~~----~~-~~~~-~~el~~~v~~~~~~i~~~~  258 (353)
                      +|.||++|||+++|+++|++|++|+++ |||+||+ +++|+||++++.+    .+ .+.. ..+..++...++..++.. 
T Consensus         1 ~T~LDs~R~r~~lA~~l~v~~~~V~~~iI~GeHG~-s~vp~~S~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   78 (173)
T d1y7ta2           1 MTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS-TMFPDLFHAEVDGRPALELVDMEWYEKVFIPTVAQRGAAIIQA-   78 (173)
T ss_dssp             CCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST-TCEEECSSCEETTEEGGGTSCHHHHHHTHHHHHHHHHHHHHHH-
T ss_pred             CChhHHHHHHHHHHHHHCcCHHHcEEEEEEEecCc-cEEeeeeeeeEcCccHHHhcccccccchhhhhhhhhHHHHHHH-
Confidence            488999999999999999999999876 5799999 9999999999753    12 2222 234444444455555544 


Q ss_pred             ccCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHH
Q 018618          259 AGAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEK  335 (353)
Q Consensus       259 ~gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~  335 (353)
                       .++++.|++|.+++.++++++.+.+.. .++|++ +++|+|  +++++||+||+++++|++.+.++ +||++|+++|++
T Consensus        79 -~~~~s~~~~a~a~~~~~~~~~~~~~~~-~~~~~~v~~~g~YGi~~~~~~s~Pvi~~~gg~~~v~~l-~L~~~E~~~l~~  155 (173)
T d1y7ta2          79 -RGASSAASAANAAIEHIRDWALGTPEG-DWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGL-EINEFARKRMEI  155 (173)
T ss_dssp             -HSSCCHHHHHHHHHHHHHHHHTBCCTT-CCEEEEEECSSGGGCCTTSEEEEEEEEETTEEEECCCC-CCCHHHHHHHHH
T ss_pred             -hccCchhhHHHHHHHHHHHHhcccCCC-CceeeEEEeccccCCccceeEeeeEEEeCCeEEEecCC-CCCHHHHHHHHH
Confidence             357888999999999999999986644 588887 689998  68999999999876666555555 999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 018618          336 AKKELAGSIQKGI  348 (353)
Q Consensus       336 s~~~l~~~~~~~~  348 (353)
                      |+++|+++++...
T Consensus       156 s~~~L~~~~e~vk  168 (173)
T d1y7ta2         156 TAQELLDEMEQVK  168 (173)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988653

>d1b8pa2 d.162.1.1 (A:159-329) Malate dehydrogenase {Aquaspirillum arcticum [TaxId: 87645]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: Lactate & malate dehydrogenases, C-terminal domain
domain: Malate dehydrogenase
species: Aquaspirillum arcticum [TaxId: 87645]

Probab=99.93  E-value=8.1e-26  Score=194.95  Aligned_cols=157  Identities=16%  Similarity=0.168  Sum_probs=119.5

Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCcc-eEEeecCCCccccccccCCCCCC-----CChHH--HHHHHHHHhcchhhhhhhhc
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVDV-PVVGGHAGVTILPLLSQVKPPCS-----FTQEE--TEYLTNRIQNGGTEVVEAKA  259 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~~-~viG~hg~~~~vp~~s~~~v~~~-----~~~~~--~~el~~~v~~~~~~i~~~~~  259 (353)
                      .||++||++++|+++|++|++|++ +|||+||+ +++|+||++++.+.     ..+..  .+++.+.++.++..+...+ 
T Consensus         2 ~LD~~R~r~~lA~kl~v~~~~V~~~iI~GehG~-s~vp~~S~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   79 (171)
T d1b8pa2           2 RLDHNRALSQIAAKTGKPVSSIEKLFVWGNHSP-TMYADYRYAQIDGASVKDMINDDAWNRDTFLPTVGKRGAAIIDAR-   79 (171)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGEESCEEEBCSST-TCEEECSSCEETTEEHHHHHCCHHHHHHTHHHHHHTHHHHHHHHH-
T ss_pred             cchHHHHHHHHHHHHCcCHHHeEEEEEEEcCCC-cEEeeeecceeecccchhhhhhhcchhhhHHHHHHHHHHHHHHHH-
Confidence            489999999999999999999976 77799999 99999999997531     11122  2455666666666666654 


Q ss_pred             cCCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC--CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHH
Q 018618          260 GAGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV--TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA  336 (353)
Q Consensus       260 gkg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~--~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s  336 (353)
                      +++++.++. .+++..+..++.+..+  .+++++ +++|+|  ++++|||+||++|++|++.+.++ +||++|+++|++|
T Consensus        80 ~~~~~~~~~-~a~~~~~~~~i~~~~~--~~~~~s~~~~g~yg~~~gi~fS~Pv~ig~~gve~v~~l-~L~~~e~~~l~~s  155 (171)
T d1b8pa2          80 GVSSAASAA-NAAIDHIHDWVLGTAG--KWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQGL-SIDAFSQERINVT  155 (171)
T ss_dssp             SSCCHHHHH-HHHHHHHHHHHHCCTT--CCEEEEEECCSGGGCCTTCEEEEEEEEETTEEEECCCC-CCCHHHHHHHHHH
T ss_pred             hhhhhhhhh-HHHHHHHHHHHhCCCc--cceeEEEEeccccccccceEEEEEEEEeCCeEEEEeCC-CCCHHHHHHHHHH
Confidence            444444444 4444545455444332  367776 689998  68999999999999999999986 9999999999999


Q ss_pred             HHHHHHHHHHhhhh
Q 018618          337 KKELAGSIQKGISF  350 (353)
Q Consensus       337 ~~~l~~~~~~~~~~  350 (353)
                      +++|+++.+.....
T Consensus       156 ~~~L~~e~~~v~~l  169 (171)
T d1b8pa2         156 LNELLEEQNGVQHL  169 (171)
T ss_dssp             HHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999998766543

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=9.1e-26  Score=194.46  Aligned_cols=139  Identities=19%  Similarity=0.200  Sum_probs=109.4

Q ss_pred             CCeEEEEcCCCCcHHHH--HHHHHhCCC--CcEEEEEeCCC--cHHHHHHHhcCC----CCCeEEEEeCCCchhhhhCCC
Q 018618           41 GFKVAILGAAGGIGQPL--AMLMKINPL--VSVLHLYDVVN--TPGVTADISHMD----TGAVVRGFLGQPQLENALTGM  110 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~l--a~~l~~~~~--~~el~L~D~~~--~~~~~~dl~~~~----~~~~v~~~~~t~d~~~al~~A  110 (353)
                      +|||+|||| |++|...  +..++....  .+||+|+|+++  .++.++|+.+..    .....+.. .++|++++++||
T Consensus         1 k~KI~iIGa-Gs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~-~~td~~~al~ga   78 (169)
T d1s6ya1           1 RLKIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIH-LTLDRRRALDGA   78 (169)
T ss_dssp             CEEEEEETT-TCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEE-EESCHHHHHTTC
T ss_pred             CcEEEEECC-ChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceee-ecCCchhhcCCC
Confidence            479999999 9887544  445554432  47999999988  567888876642    12333333 246778999999


Q ss_pred             cEEEEcCCCCCCCCCCHHHH--------------------HHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHH
Q 018618          111 DLVIIPAGVPRKPGMTRDDL--------------------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAE  170 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~--------------------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~  170 (353)
                      |+||+++|.++++|++|.++                    +.+|+++++++++.|+++||++|+|++|||+|++|+++  
T Consensus        79 DvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~vtNPvdv~t~~~--  156 (169)
T d1s6ya1          79 DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTNPAGMVTEAV--  156 (169)
T ss_dssp             SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSHHHHHHHH--
T ss_pred             CEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEeCChHHHHHHHH--
Confidence            99999999887777666554                    57999999999999999999999999999999998765  


Q ss_pred             HHHHhCCCCCCceEeec
Q 018618          171 VFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       171 ~~~~~~~~~~~kviG~t  187 (353)
                        ++.  +|++||||+|
T Consensus       157 --~k~--~p~~kviGlC  169 (169)
T d1s6ya1         157 --LRY--TKQEKVVGLC  169 (169)
T ss_dssp             --HHH--CCCCCEEECC
T ss_pred             --HHH--CCCCCEEeeC
Confidence              565  5889999997

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=99.90  E-value=3e-24  Score=184.21  Aligned_cols=138  Identities=20%  Similarity=0.224  Sum_probs=107.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHH--HHHhCC-C-CcEEEEEeCCC--cHHHHHHHhcCC--CCCeEEEEeCCCchhhhhCCCc
Q 018618           40 AGFKVAILGAAGGIGQPLAM--LMKINP-L-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~--~l~~~~-~-~~el~L~D~~~--~~~~~~dl~~~~--~~~~v~~~~~t~d~~~al~~AD  111 (353)
                      +..||+|||| |++|...+.  .+.... + .+||+|+|+++  +++.+.++.+..  .....+... ++|++++++|||
T Consensus         2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~~eal~~AD   79 (167)
T d1u8xx1           2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-TTDPEEAFTDVD   79 (167)
T ss_dssp             CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-ESCHHHHHSSCS
T ss_pred             CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEe-cCChhhccCCCC
Confidence            4579999999 999887543  333232 2 47999999998  566666666542  122223221 468889999999


Q ss_pred             EEEEcCCCCCCCCCCHHHHHH--------------------HHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHH
Q 018618          112 LVIIPAGVPRKPGMTRDDLFN--------------------INAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEV  171 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~~~~~--------------------~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~  171 (353)
                      +||+++|.++++|++|.+++.                    +|+++++++++.|+++||+||+|++|||+|++|+++   
T Consensus        80 ~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~TNPvdv~t~~~---  156 (167)
T d1u8xx1          80 FVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNPAAIVAEAT---  156 (167)
T ss_dssp             EEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSCHHHHHHHH---
T ss_pred             EEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeCCHHHHHHHHH---
Confidence            999999999999988887654                    679999999999999999999999999999998765   


Q ss_pred             HHHhCCCCCCceEe
Q 018618          172 FKKAGTYDPKKLLG  185 (353)
Q Consensus       172 ~~~~~~~~~~kviG  185 (353)
                       ++.  +|++|||.
T Consensus       157 -~k~--~P~~rVI~  167 (167)
T d1u8xx1         157 -RRL--RPNSKILN  167 (167)
T ss_dssp             -HHH--STTCCEEE
T ss_pred             -HHH--CCcccccC
Confidence             555  68999973

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.89  E-value=4.3e-25  Score=188.96  Aligned_cols=137  Identities=16%  Similarity=0.233  Sum_probs=102.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHh--C--CCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKI--N--PLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~--~--~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      |||+|||| |++|...+.....  .  ...+||+|+|+++ ..+.+.|+.+........... +++.+++++|||+||++
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~-t~~~~~~l~~aDvVVit   78 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI-SDTFEGAVVDAKYVIFQ   78 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE-CSSHHHHHTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE-ecCcccccCCCCEEEEe
Confidence            79999999 9999988864332  2  2357999999988 334566766643222233322 45678999999999999


Q ss_pred             CCCCCCCCCCHHHHH--------------------HHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          117 AGVPRKPGMTRDDLF--------------------NINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       117 ag~~~~~g~~r~~~~--------------------~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      +|.+++++++|.+++                    .++++.+.++.+ +.++||++|+|++|||+|++|+++    ++. 
T Consensus        79 a~~~~~~~~~r~~~i~~~~~i~~~~~~g~~g~~~~~r~~~~~~~i~~-~~~~~p~a~~i~vtNPvdiit~~~----~~~-  152 (162)
T d1up7a1          79 FRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVD-TVRKTSNATIVNFTNPSGHITEFV----RNY-  152 (162)
T ss_dssp             CCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHH-HHHHTTCCEEEECSSSHHHHHHHH----HHT-
T ss_pred             cccCCCCCcchHhhhhhhcCeeeeeccCcchhhhhhhhhHHHHHHhh-hhccCCCeEEEEeCCHHHHHHHHH----HHh-
Confidence            999887777666554                    456677777765 778899999999999999998654    665 


Q ss_pred             CCCCCceEeec
Q 018618          177 TYDPKKLLGVT  187 (353)
Q Consensus       177 ~~~~~kviG~t  187 (353)
                       +|++|++|+|
T Consensus       153 -~p~~rviGlC  162 (162)
T d1up7a1         153 -LEYEKFIGLC  162 (162)
T ss_dssp             -TCCSSEEECC
T ss_pred             -CCCCCEEeeC
Confidence             5788999997

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=2.1e-23  Score=179.83  Aligned_cols=137  Identities=20%  Similarity=0.183  Sum_probs=104.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHH--HHHhC-CC-CcEEEEEeCCC--cHHHHHHHhcCC--CCCeEEEEeCCCchhhhhCCCc
Q 018618           40 AGFKVAILGAAGGIGQPLAM--LMKIN-PL-VSVLHLYDVVN--TPGVTADISHMD--TGAVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~--~l~~~-~~-~~el~L~D~~~--~~~~~~dl~~~~--~~~~v~~~~~t~d~~~al~~AD  111 (353)
                      |+|||+|||| |++|++.+.  .++.. ++ .+||+|+|+++  +++.+.|+.|..  .....+.. .++|++++++|||
T Consensus         1 p~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~-~~td~~eaL~dad   78 (171)
T d1obba1           1 PSVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE-KTMNLDDVIIDAD   78 (171)
T ss_dssp             CCCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE-EESCHHHHHTTCS
T ss_pred             CCcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEE-EeCChhhcccCCC
Confidence            5789999999 999988653  34433 33 46999999998  677778877742  22333332 2478899999999


Q ss_pred             EEEEcCCC------------------CCCCCCCHHHH--------HHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchh
Q 018618          112 LVIIPAGV------------------PRKPGMTRDDL--------FNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTV  165 (353)
Q Consensus       112 iVIi~ag~------------------~~~~g~~r~~~--------~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t  165 (353)
                      +||++++.                  ++.++++|.+.        +.+|+++++++++.|+++||++|+|++|||+|++|
T Consensus        79 ~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~i~~TNPvdv~t  158 (171)
T d1obba1          79 FVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGT  158 (171)
T ss_dssp             EEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHH
T ss_pred             eEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEEEEECChHHHHH
Confidence            99998653                  34556665553        56899999999999999999999999999999998


Q ss_pred             HHHHHHHHHhCCCCCCceEe
Q 018618          166 PIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       166 ~~~~~~~~~~~~~~~~kviG  185 (353)
                      +++    ++++++   |+||
T Consensus       159 ~~~----~k~~~~---k~iG  171 (171)
T d1obba1         159 TLV----TRTVPI---KAVG  171 (171)
T ss_dssp             HHH----HHHSCS---EEEE
T ss_pred             HHH----HHhcCC---CccC
Confidence            764    676654   8887

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=3.6e-09  Score=91.17  Aligned_cols=119  Identities=14%  Similarity=0.192  Sum_probs=83.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c--HHH--H----HHHhcCCC--------------CCeEEEEe
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGV--T----ADISHMDT--------------GAVVRGFL   98 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~--~~~--~----~dl~~~~~--------------~~~v~~~~   98 (353)
                      .||+|||| |.+|+.+|..++..|+  +|+|+|+++ .  ++.  .    ..+.....              ...+..  
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~--~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~--   79 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGH--TVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT--   79 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEE--
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCC--cEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhccc--
Confidence            49999999 9999999999999999  999999987 1  111  0    01111110              012443  


Q ss_pred             CCCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618           99 GQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus        99 ~t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                       ++|+++++++||+|+.+.              .+|+++.+++...+.+++| ++  |++||...+...-   .. ... 
T Consensus        80 -~~d~~~a~~~ad~ViEav--------------~E~l~~K~~v~~~l~~~~~~~~--ilasnTS~l~i~~---la-~~~-  137 (192)
T d1f0ya2          80 -STDAASVVHSTDLVVEAI--------------VENLKVKNELFKRLDKFAAEHT--IFASNTSSLQITS---IA-NAT-  137 (192)
T ss_dssp             -ESCHHHHTTSCSEEEECC--------------CSCHHHHHHHHHHHTTTSCTTC--EEEECCSSSCHHH---HH-TTS-
T ss_pred             -cchhHhhhcccceehhhc--------------ccchhHHHHHHHHHhhhcccCc--eeeccCcccccch---hh-hhc-
Confidence             367889999999999985              5778899999999999995 66  4488887655422   21 223 


Q ss_pred             CCCCceEeec
Q 018618          178 YDPKKLLGVT  187 (353)
Q Consensus       178 ~~~~kviG~t  187 (353)
                      -.|+|++|+.
T Consensus       138 ~~p~r~ig~H  147 (192)
T d1f0ya2         138 TRQDRFAGLH  147 (192)
T ss_dssp             SCGGGEEEEE
T ss_pred             cCHhHEEeec
Confidence            3466777774

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=98.71  E-value=3.3e-09  Score=90.92  Aligned_cols=118  Identities=19%  Similarity=0.230  Sum_probs=81.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c--HH--HHH----HHhc-CCC--------CCeEEEEeCCCch
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PG--VTA----DISH-MDT--------GAVVRGFLGQPQL  103 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~--~~--~~~----dl~~-~~~--------~~~v~~~~~t~d~  103 (353)
                      .||+|||| |.+|+.+|..++..|+  +|+++|+++ .  ++  ...    ++.. ...        ...+..   +++.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~--~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~---~~~~   78 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGT--PILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRP---TLSY   78 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEE---ESSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--eEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeec---cccc
Confidence            58999999 9999999999999998  999999987 1  11  111    1111 111        112443   2454


Q ss_pred             hhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618          104 ENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  182 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k  182 (353)
                       +++.+||+||.+.              .+|+++.+++.++|.+++| +++  ++||.......-+   . .... .|+|
T Consensus        79 -~~~~~adlViEav--------------~E~l~~K~~lf~~l~~~~~~~~I--iaSnTS~l~i~~l---a-~~~~-~p~r  136 (186)
T d1wdka3          79 -GDFGNVDLVVEAV--------------VENPKVKQAVLAEVENHVREDAI--LASNTSTISISLL---A-KALK-RPEN  136 (186)
T ss_dssp             -TTGGGCSEEEECC--------------CSCHHHHHHHHHHHHTTSCTTCE--EEECCSSSCHHHH---G-GGCS-CGGG
T ss_pred             -ccccccceeeeee--------------cchHHHHHHHHHHHHhhcCCCee--EEeccccccHHHH---H-Hhcc-Cchh
Confidence             6799999999985              5678899999999999995 664  4888877664322   2 2232 3567


Q ss_pred             eEeec
Q 018618          183 LLGVT  187 (353)
Q Consensus       183 viG~t  187 (353)
                      ++|+.
T Consensus       137 ~~g~H  141 (186)
T d1wdka3         137 FVGMH  141 (186)
T ss_dssp             EEEEE
T ss_pred             eEeec
Confidence            88764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.62  E-value=8.5e-08  Score=82.81  Aligned_cols=123  Identities=16%  Similarity=0.175  Sum_probs=77.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC----------------CCCeEEEEeCCCchhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----------------TGAVVRGFLGQPQLEN  105 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~----------------~~~~v~~~~~t~d~~~  105 (353)
                      |||+|||+ |+||..+|..|+..|+  +|+.+|.++.  .+..|....                ....+..   ++|+++
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~--~V~g~D~n~~--~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~---~~~~~~   72 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGH--EVIGVDVSST--KIDLINQGKSPIVEPGLEALLQQGRQTGRLSG---TTDFKK   72 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEE---ESCHHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCC--cEEEEeCCHH--HHHHhcccCCcccchhhhhhhhhhhccccccc---CCCHHH
Confidence            89999999 9999999999999998  9999999751  112222111                0123343   367889


Q ss_pred             hhCCCcEEEEcCCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE-ecCCCCchhHHHHHHHHHh
Q 018618          106 ALTGMDLVIIPAGVPRKPG-MTRDDLFNINAGIVRTLCEGIAKCCPNATVNL-ISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       106 al~~ADiVIi~ag~~~~~g-~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~~~~~~~~~~  175 (353)
                      ++++||+++++.+.|.... ......+.   ....++.+.++...++..|++ .|-|....-.+...++.+.
T Consensus        73 ~i~~~d~i~i~VpTP~~~~~~~d~~~~~---~~~~~i~~~~~~~~~~~liii~STv~pGtt~~~~~~~l~~~  141 (202)
T d1mv8a2          73 AVLDSDVSFICVGTPSKKNGDLDLGYIE---TVCREIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDC  141 (202)
T ss_dssp             HHHTCSEEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHH
T ss_pred             HHhhCCEEEEecCccccccccccchhhh---hhhhhhhheeecccCCcceeeccccCCcchhhhhhhhhhcc
Confidence            9999999999988875332 22222222   333444444554556766655 4566665544433333333

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2e-07  Score=85.28  Aligned_cols=167  Identities=11%  Similarity=0.029  Sum_probs=104.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      +||.|+||+|++|++++..|++.|+  +|+.+|... ...  ..+.+......++... ...++.++.++|+||++|+..
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~--~V~~~d~~~~~~~--~~~~~~~~~~~~d~~~-~~~~~~~~~~~d~VihlAa~~   76 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH--EVTVVDNFFTGRK--RNVEHWIGHENFELIN-HDVVEPLYIEVDQIYHLASPA   76 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCG--GGTGGGTTCTTEEEEE-CCTTSCCCCCCSEEEECCSCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCCcCCH--HHHHHhcCCCceEEEe-hHHHHHHHcCCCEEEECcccC
Confidence            4999999999999999999999988  999998633 110  1111111122333332 233456778999999998754


Q ss_pred             CC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC------CCCc-hhHHHHHHHHHhCCCCCCceEeechhhH
Q 018618          121 RK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN------PVNS-TVPIAAEVFKKAGTYDPKKLLGVTMLDV  191 (353)
Q Consensus       121 ~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN------Pv~~-~t~~~~~~~~~~~~~~~~kviG~t~ld~  191 (353)
                      ..  ...+..+.+..|+....++.+.+++...  .+|.+|.      |... ...   .......-+.|...+|.+.+..
T Consensus        77 ~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~--k~I~~SS~~vy~~~~~~~~~e---~~~~~~~~~~p~~~Y~~sK~~~  151 (312)
T d2b69a1          77 SPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLASTSEVYGDPEVHPQSE---DYWGHVNPIGPRACYDEGKRVA  151 (312)
T ss_dssp             SHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEEEGGGGBSCSSSSBCT---TCCCBCCSSSTTHHHHHHHHHH
T ss_pred             CchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC--cEEEEEChheecCCCCCCCCc---cccCCCCCCCCccHHHHHHHHH
Confidence            31  1234566788999999999999998754  4444421      1110 000   0000011133556678877777


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          192 VRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       192 ~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      ..+-..+++..|++..-++ +.|+|.+.
T Consensus       152 E~~~~~~~~~~~~~~~~lR~~~vyGp~~  179 (312)
T d2b69a1         152 ETMCYAYMKQEGVEVRVARIFNTFGPRM  179 (312)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECCEECTTC
T ss_pred             HHHHHHHHHHhCCcEEEEEeeeEECCCC
Confidence            7777888888888776664 56888553

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=98.45  E-value=2.5e-07  Score=77.53  Aligned_cols=100  Identities=16%  Similarity=0.160  Sum_probs=65.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCC--C-CCeEEE--EeCCCchhhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMD--T-GAVVRG--FLGQPQLENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~--~-~~~v~~--~~~t~d~~~al~~ADiVIi  115 (353)
                      +||+|||| |.+|+.+|..|.+.|+  +|.++|+++.+ ....+.....  . ......  ...++|.++++++||+||+
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii   78 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQ--SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI   78 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence            59999999 9999999999999998  99999997621 1111111110  0 011111  0113577899999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCC
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  160 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  160 (353)
                      +....                ...+++++++.+- ++.+|+...|.
T Consensus        79 ~v~~~----------------~~~~~~~~i~~~l~~~~~iv~~~g~  108 (184)
T d1bg6a2          79 VVPAI----------------HHASIAANIASYISEGQLIILNPGA  108 (184)
T ss_dssp             CSCGG----------------GHHHHHHHHGGGCCTTCEEEESSCC
T ss_pred             EEchh----------------HHHHHHHHhhhccCCCCEEEEeCCC
Confidence            85211                2456777788776 56665544443

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=98.44  E-value=2.8e-07  Score=85.04  Aligned_cols=173  Identities=18%  Similarity=0.137  Sum_probs=98.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCC----CchhhhhC--CCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ----PQLENALT--GMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~--~ADiV  113 (353)
                      |||.|+||+|++|++++..|+..|+  +|+++|...  .......+.+.. ...+..+...    ..+.++++  ++|+|
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~~~d~V   77 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGH--DVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDHAIDTV   77 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCCCcchhhHHHHHhhc-CCCCEEEEeecCCHHHHHHHHhccCCCEE
Confidence            8999999999999999999999997  999999643  222211121111 0122222111    23445565  78999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhH
Q 018618          114 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  191 (353)
Q Consensus       114 Ii~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~  191 (353)
                      |++|+....+  -+...+.+..|+....++.+.++++....+|...|.-+..-..- ...........|...+|.+.+..
T Consensus        78 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~-~~~~e~~~~~~p~~~Y~~sK~~~  156 (338)
T d1udca_          78 IHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPK-IPYVESFPTGTPQSPYGKSKLMV  156 (338)
T ss_dssp             EECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCS-SSBCTTSCCCCCSSHHHHHHHHH
T ss_pred             EECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccc-cccccccccCCCcchHHHHHhhh
Confidence            9998754211  02345778899999999999999987665554443211100000 00000112233456677766655


Q ss_pred             HHHHHHHHHH-hCCCCCCCc-ceEEeecC
Q 018618          192 VRANTFVAEV-LGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       192 ~R~~~~lA~~-l~v~~~~v~-~~viG~hg  218 (353)
                      .++-...++. .+.+..-++ ..++|.+.
T Consensus       157 e~~~~~~~~~~~~~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         157 EQILTDLQKAQPDWSIALLRYFNPVGAHP  185 (338)
T ss_dssp             HHHHHHHHHHSTTCEEEEEEECEEECCCT
T ss_pred             hHHHHHHHhhccCCeEEEEeeccEEeccC
Confidence            5554433333 344433342 56777654

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.39  E-value=6.1e-07  Score=74.40  Aligned_cols=90  Identities=17%  Similarity=0.190  Sum_probs=60.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      |||+|||+ |.+|+.+|..|.+.|+  +|..+|+++. ...+.+..  .  .. ..   .++. +++++||+||++.  |
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~--~V~~~d~~~~~~~~a~~~~--~--~~-~~---~~~~-~~~~~~DiIilav--p   66 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGH--YLIGVSRQQSTCEKAVERQ--L--VD-EA---GQDL-SLLQTAKIIFLCT--P   66 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHTT--S--CS-EE---ESCG-GGGTTCSEEEECS--C
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCC--EEEEEECCchHHHHHHHhh--c--cc-ee---eeec-ccccccccccccC--c
Confidence            89999999 9999999999999998  9999998752 11122111  1  11 11   1343 7899999999974  2


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                                    ...+.++.+.+..+- ++.+|+..++
T Consensus        67 --------------~~~~~~vl~~l~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          67 --------------IQLILPTLEKLIPHLSPTAIVTDVAS   92 (165)
T ss_dssp             --------------HHHHHHHHHHHGGGSCTTCEEEECCS
T ss_pred             --------------Hhhhhhhhhhhhhhcccccceeeccc
Confidence                          223456666676665 5666655544

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.39  E-value=3.4e-07  Score=85.01  Aligned_cols=175  Identities=15%  Similarity=0.048  Sum_probs=106.8

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe--CCCchhhhhCCCcEEEEc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL--GQPQLENALTGMDLVIIP  116 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~--~t~d~~~al~~ADiVIi~  116 (353)
                      .+.|||.|+||+|++|++++..|.+.|+  +|+.+|.........++.    ........  ...++.+++++.|.||++
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~d~Vih~   86 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH--YVIASDWKKNEHMTEDMF----CDEFHLVDLRVMENCLKVTEGVDHVFNL   86 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCSSSCGGGT----CSEEEECCTTSHHHHHHHHTTCSEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEeCCCccchhhhcc----cCcEEEeechhHHHHHHHhhcCCeEeec
Confidence            3589999999999999999999999998  999999765211101111    11222211  112445667899999998


Q ss_pred             CCCCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHH--HHH---HHHHhCCCCCCceEeech
Q 018618          117 AGVPRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPI--AAE---VFKKAGTYDPKKLLGVTM  188 (353)
Q Consensus       117 ag~~~~~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~--~~~---~~~~~~~~~~~kviG~t~  188 (353)
                      ++.....   ..........|+.....+.....+.+..-+|...|--+.....-  ..+   .........|...+|.+.
T Consensus        87 a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK  166 (363)
T d2c5aa1          87 AADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEK  166 (363)
T ss_dssp             CCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHH
T ss_pred             ccccccccccccccccccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHH
Confidence            8654221   23445567889999999999998876543333333211111000  000   000111233456678877


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018618          189 LDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  219 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~  219 (353)
                      +...++-..+.+..|++..-++ ..++|.++.
T Consensus       167 ~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~  198 (363)
T d2c5aa1         167 LATEELCKHYNKDFGIECRIGRFHNIYGPFGT  198 (363)
T ss_dssp             HHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             HHHHHHHHHHHHHhCCCEEEEEeeeEeccCCc
Confidence            7777777777888888765554 568886654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.37  E-value=8.8e-07  Score=74.87  Aligned_cols=97  Identities=24%  Similarity=0.270  Sum_probs=67.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC----CC---CeEEEEeCCCchhhhhCCCcEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD----TG---AVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~----~~---~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      |||+|||+ |..|+++|..|...+.  +|.|+.++.....+..+....    ..   ..... ..++|.++++++||+||
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~--~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~ad~Ii   76 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGN--EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEI-FWPEQLEKCLENAEVVL   76 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCC--EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEE-ECGGGHHHHHTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--EEEEEEecccHHHHHHHhhhhhhhhhcchhccccc-cccccHHHHHhccchhh
Confidence            89999999 9999999999999887  999997643233333443221    11   12222 24678889999999999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ++..                ...++++++++..+-++..+++.+
T Consensus        77 ~avp----------------s~~~~~~~~~l~~~l~~~~ii~~t  104 (180)
T d1txga2          77 LGVS----------------TDGVLPVMSRILPYLKDQYIVLIS  104 (180)
T ss_dssp             ECSC----------------GGGHHHHHHHHTTTCCSCEEEECC
T ss_pred             cccc----------------hhhhHHHHHhhccccccceecccc
Confidence            9752                123667788888777665555544

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=98.34  E-value=9.1e-07  Score=82.29  Aligned_cols=168  Identities=15%  Similarity=0.046  Sum_probs=103.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc---HHHHHHHhcC--CCCCeEEEEeC----CCchhhhhCCC--c
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT---PGVTADISHM--DTGAVVRGFLG----QPQLENALTGM--D  111 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~---~~~~~dl~~~--~~~~~v~~~~~----t~d~~~al~~A--D  111 (353)
                      ++.|+||+|++|++++..|++.|+  +|+.+|+...   ......+.+.  .....++.+.+    ..++++.+++.  |
T Consensus         3 ~vLITGatGfiGs~lv~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (357)
T d1db3a_           3 VALITGVTGQDGSYLAEFLLEKGY--EVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (357)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcC--EEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence            555999999999999999999998  9999998541   1111111111  11234444321    12334556654  9


Q ss_pred             EEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhC-C-CcEEEEec------CCCCchhHHHHHHHHHhCCCCCC
Q 018618          112 LVIIPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCC-P-NATVNLIS------NPVNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       112 iVIi~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~-p-~a~viv~t------NPv~~~t~~~~~~~~~~~~~~~~  181 (353)
                      +|+.+++....  ...+....+..|+....++.+.+++++ . ...+|.+|      +|-+...       .....+.|.
T Consensus        81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~-------~E~~~~~P~  153 (357)
T d1db3a_          81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQ-------KETTPFYPR  153 (357)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSB-------CTTSCCCCC
T ss_pred             EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCc-------CCCCCCCCC
Confidence            99999886532  234556677889999999999999876 3 34555544      2322110       112224455


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  219 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~  219 (353)
                      ..+|.+.+....+-..+++..+++..-++ +.++|...+
T Consensus       154 ~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~  192 (357)
T d1db3a_         154 SPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRG  192 (357)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSC
T ss_pred             ChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCC
Confidence            67888877777777888888888766554 457886443

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.30  E-value=1.3e-06  Score=79.67  Aligned_cols=182  Identities=16%  Similarity=0.197  Sum_probs=110.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC----CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----CchhhhhCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQLENALTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~----~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~ADiV  113 (353)
                      |||.|+||+|++|++++..|++.|+    ..++..+|.....+....+........+..+...    ........+.|+|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            8999999999999999999988764    4678888875421111112221112344443221    1334567999999


Q ss_pred             EEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhH
Q 018618          114 IIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDV  191 (353)
Q Consensus       114 Ii~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~  191 (353)
                      ++.|+.+...  .....+.+..|+....++++.+.++...-+|...|.-+..-..-  .-.....-+.|.-.+|.+.+..
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~--~~~~E~~~~~p~~~Y~~sK~~~  158 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDS--GSWTESSPLEPNSPYAASKAGS  158 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSS--SCBCTTSCCCCCSHHHHHHHHH
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCC--CCCCCCCCCCCCCHHHHHHHHH
Confidence            9998655321  12344567889999999999999887654444333311100000  0001112244555677776666


Q ss_pred             HHHHHHHHHHhCCCCCCCc-ceEEeecCC-Cccccc
Q 018618          192 VRANTFVAEVLGLDPRDVD-VPVVGGHAG-VTILPL  225 (353)
Q Consensus       192 ~R~~~~lA~~l~v~~~~v~-~~viG~hg~-~~~vp~  225 (353)
                      ..+-..+++..|++...++ +.|+|.+.. ..++|.
T Consensus       159 E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~  194 (322)
T d1r6da_         159 DLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPL  194 (322)
T ss_dssp             HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHH
T ss_pred             HHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHH
Confidence            6777888888898877774 678885432 134544

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.29  E-value=7e-07  Score=81.18  Aligned_cols=111  Identities=21%  Similarity=0.180  Sum_probs=75.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHHHHHHhcCCCCCeEEEEeCC----CchhhhhCCC--cEE
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGVTADISHMDTGAVVRGFLGQ----PQLENALTGM--DLV  113 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~~~dl~~~~~~~~v~~~~~t----~d~~~al~~A--DiV  113 (353)
                      ||.|+||+|++|++++..|++.|+  +|+.+|...  . ......+...   ..++.+.+.    .++.+++++.  |+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~--~V~~id~~~~~~~~~~~~~~~~~---~~~~~i~~Di~~~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI--DLIVFDNLSRKGATDNLHWLSSL---GNFEFVHGDIRNKNDVTRLITKYMPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSTTHHHHHHHHHTT---CCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCCcccchhHHHHhhcc---CCcEEEEcccCCHHHHHHHHHhcCCceE
Confidence            899999999999999999999998  999998543  1 1111222221   223332221    2345666554  999


Q ss_pred             EEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          114 IIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       114 Ii~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      |++|+......  .+..+....|+....++++.+.+....-.++..|
T Consensus        77 ih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS  123 (338)
T d1orra_          77 FHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSS  123 (338)
T ss_dssp             EECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             EeecccccccccccChHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence            99987543221  2345677889999999999999988665555554

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.25  E-value=3.7e-07  Score=75.28  Aligned_cols=102  Identities=17%  Similarity=0.235  Sum_probs=67.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      |||+|+|+ |.+|+.++..|.+.|+  +|.++|+++.................... ...+ .+++.++|+||++.....
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~D~iii~vka~~   75 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGH--EVQGWLRVPQPYCSVNLVETDGSIFNESL-TAND-PDFLATSDLLLVTLKAWQ   75 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSEEEEEEECTTSCEEEEEE-EESC-HHHHHTCSEEEECSCGGG
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCC--ceEEEEcCHHHhhhhccccCCcccccccc-ccch-hhhhcccceEEEeecccc
Confidence            89999999 9999999999999998  99999987721111111111111111111 1233 577899999999863221


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCch
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNST  164 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~  164 (353)
                                      +.+.++.+..+- ++..|+.+.|=++..
T Consensus        76 ----------------~~~~~~~l~~~~~~~~~Iv~~qNG~~~~  103 (167)
T d1ks9a2          76 ----------------VSDAVKSLASTLPVTTPILLIHNGMGTI  103 (167)
T ss_dssp             ----------------HHHHHHHHHTTSCTTSCEEEECSSSCTT
T ss_pred             ----------------hHHHHHhhccccCcccEEeeccCcccHH
Confidence                            445666666554 688888888876654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=98.25  E-value=5.4e-07  Score=76.98  Aligned_cols=72  Identities=14%  Similarity=0.208  Sum_probs=52.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcC--C------CCCeEEEEeCCCchhhhhCCCc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHM--D------TGAVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~--~------~~~~v~~~~~t~d~~~al~~AD  111 (353)
                      .+.||+|+|| |..|+++|..|...|+  +|.|+++++.....+.-.+.  .      ....+..   ++|+++++++||
T Consensus         6 ~m~KI~ViGa-G~wGtAlA~~La~~g~--~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~---t~~l~~a~~~ad   79 (189)
T d1n1ea2           6 YLNKAVVFGS-GAFGTALAMVLSKKCR--EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF---TSDVEKAYNGAE   79 (189)
T ss_dssp             CEEEEEEECC-SHHHHHHHHHHHTTEE--EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE---ESCHHHHHTTCS
T ss_pred             eeceEEEECC-CHHHHHHHHHHHHcCC--eEEEEEecHHHHHHHhhccccccccccccccccccc---chhhhhccCCCC
Confidence            3458999999 9999999999999887  99999987622111111221  1      1234554   468899999999


Q ss_pred             EEEEcC
Q 018618          112 LVIIPA  117 (353)
Q Consensus       112 iVIi~a  117 (353)
                      +||++.
T Consensus        80 ~iiiav   85 (189)
T d1n1ea2          80 IILFVI   85 (189)
T ss_dssp             CEEECS
T ss_pred             EEEEcC
Confidence            999974

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=4e-06  Score=71.60  Aligned_cols=99  Identities=16%  Similarity=0.177  Sum_probs=65.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi  115 (353)
                      .++||+|+||+|++|++++..|+..|+  +|.+++++..+     +.... ...++.+.+    ..++.++++++|+||.
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~--~V~~~~R~~~~-----~~~~~-~~~~~~~~gD~~d~~~l~~al~~~d~vi~   73 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGY--EVTVLVRDSSR-----LPSEG-PRPAHVVVGDVLQAADVDKTVAGQDAVIV   73 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCGGG-----SCSSS-CCCSEEEESCTTSHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC--EEEEEEcChhh-----ccccc-ccccccccccccchhhHHHHhcCCCEEEE
Confidence            356999999999999999999999998  99999987521     11111 112222222    1456688999999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN  151 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~  151 (353)
                      +.|........     ..+.+..+++++.+++..-+
T Consensus        74 ~~g~~~~~~~~-----~~~~~~~~~l~~aa~~~~v~  104 (205)
T d1hdoa_          74 LLGTRNDLSPT-----TVMSEGARNIVAAMKAHGVD  104 (205)
T ss_dssp             CCCCTTCCSCC-----CHHHHHHHHHHHHHHHHTCC
T ss_pred             EeccCCchhhh-----hhhHHHHHHHHHHHHhcCCC
Confidence            88754222111     23445667778888877633

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1e-06  Score=77.02  Aligned_cols=113  Identities=19%  Similarity=0.085  Sum_probs=75.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE--EeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG--FLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~--~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ++||.|+||+|++|++++..|++.|...+|.++++++..........    .....  +....++.++++++|+|+.++|
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~----i~~~~~D~~~~~~~~~~~~~~d~vi~~~~   89 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN----VNQEVVDFEKLDDYASAFQGHDVGFCCLG   89 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGG----CEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccce----eeeeeeccccccccccccccccccccccc
Confidence            34899999999999999999998887779999998761100000111    11111  1112467788999999999986


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ... ......++...|.....++++...+.....++.+.|
T Consensus        90 ~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss  128 (232)
T d2bkaa1          90 TTR-GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSS  128 (232)
T ss_dssp             CCH-HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             ccc-cccchhhhhhhcccccceeeecccccCccccccCCc
Confidence            431 122345566788999999999888766554444333

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.13  E-value=1.2e-06  Score=81.67  Aligned_cols=183  Identities=17%  Similarity=0.126  Sum_probs=105.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-Cc---hhhhhC--CCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ---LENALT--GMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~d---~~~al~--~ADiVIi  115 (353)
                      |||.|+||+|++|++++..|+..++. .++++|.....+....+.+......+..+... +|   ++..++  +.|+||.
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~-vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vih   79 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQD-TVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMH   79 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSC-EEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            79999999999999999999988862 47788865411111223333223345543221 23   233333  5899999


Q ss_pred             cCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCC--------cEEEEecC-CCCchhHHH--HH------HHHHhC
Q 018618          116 PAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPN--------ATVNLISN-PVNSTVPIA--AE------VFKKAG  176 (353)
Q Consensus       116 ~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~--------a~viv~tN-Pv~~~t~~~--~~------~~~~~~  176 (353)
                      +|+....+.  .+..+.+..|+....++.+.+.++...        ..+|..|. -+.......  .+      ......
T Consensus        80 lAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~  159 (361)
T d1kewa_          80 LAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT  159 (361)
T ss_dssp             CCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred             CccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCC
Confidence            987542110  123456788998888888888766421        23444432 111000000  00      000011


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCC-Cccccc
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG-VTILPL  225 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~-~~~vp~  225 (353)
                      ...|..++|.+.+...++-..+++..|++...++ ..|+|.++. .+.+|.
T Consensus       160 ~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~  210 (361)
T d1kewa_         160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPL  210 (361)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHH
Confidence            1234456788877777888888888898777664 568886654 134554

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.11  E-value=7.3e-06  Score=75.09  Aligned_cols=175  Identities=14%  Similarity=0.010  Sum_probs=108.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHH---HHHHhcCCCCCeEEEEeCC-C---chhhhhCCCc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGV---TADISHMDTGAVVRGFLGQ-P---QLENALTGMD  111 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~---~~dl~~~~~~~~v~~~~~t-~---d~~~al~~AD  111 (353)
                      +++|.|+||+|++|++++..|.+.|+  +|..+|...  ....   ...+........++..... .   .......+.|
T Consensus        16 ~k~iLVTG~tGfIGs~lv~~L~~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          16 PKVWLITGVAGFIGSNLLETLLKLDQ--KVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcC--EEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            46899999999999999999999998  999999643  1111   1111111001223332211 1   2235568889


Q ss_pred             EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechh
Q 018618          112 LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  189 (353)
Q Consensus       112 iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~l  189 (353)
                      .|+..+.....+  ..+.......|+....++.+.+.+.....+|...|..+..-..-.  -.....-..|.-.+|.+.+
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~--~~~E~~~~~p~~~Y~~sK~  171 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGL--PKVEDTIGKPLSPYAVTKY  171 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCS--SBCTTCCCCCCSHHHHHHH
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCC--CccCCCCCCCCCcchHHHH
Confidence            999887543211  234456778899999999999998876666655553221100000  0001112334567788777


Q ss_pred             hHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018618          190 DVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  219 (353)
Q Consensus       190 d~~R~~~~lA~~l~v~~~~v~-~~viG~hg~  219 (353)
                      ...++-..+++..+++..-++ ..++|.+++
T Consensus       172 ~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~  202 (341)
T d1sb8a_         172 VNELYADVFSRCYGFSTIGLRYFNVFGRRQD  202 (341)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEEECCEECTTCC
T ss_pred             HHHHHHHHHHHHhCCCeEEEEeceeeccCcC
Confidence            777888888899898877666 558886643

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.10  E-value=2.9e-06  Score=78.14  Aligned_cols=176  Identities=16%  Similarity=0.119  Sum_probs=102.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG----QPQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADiVIi~  116 (353)
                      +|||.|+||+|+||++++..|...|....++.+|.....+....+.... ...+..+.+    ...+.+++++.|.|++.
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~-~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~   80 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAAKADAIVHY   80 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhh-cCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence            6899999999999999999998888644677777533111111111111 123433322    13446778999999998


Q ss_pred             CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCc--hh----HHH----HHHHHHhCCCCCCceE
Q 018618          117 AGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNS--TV----PIA----AEVFKKAGTYDPKKLL  184 (353)
Q Consensus       117 ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~--~t----~~~----~~~~~~~~~~~~~kvi  184 (353)
                      |+......  .+..+.+..|+.....++....+....- +...|.-+..  ..    +..    ...........|...+
T Consensus        81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~k~-i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y  159 (346)
T d1oc2a_          81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRF-HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPY  159 (346)
T ss_dssp             CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEE-EEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHH
T ss_pred             hhcccccchhhCcccceeeehHhHHhhhhhhccccccc-cccccceEecccCccccccccccCcccccccCCCCCCCCHH
Confidence            76543221  1234667889999999999998887532 2222221110  00    000    0000011122334567


Q ss_pred             eechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          185 GVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       185 G~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      |.+.+...++-..+++..|++..-++ ..|+|.+.
T Consensus       160 ~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~  194 (346)
T d1oc2a_         160 SSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQ  194 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTC
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCC
Confidence            77777777777777788887665553 55788544

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.03  E-value=1e-05  Score=75.59  Aligned_cols=174  Identities=13%  Similarity=0.096  Sum_probs=102.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-----------------H-HHHHHhcCCCCCeEEEEeCC-C-
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-----------------G-VTADISHMDTGAVVRGFLGQ-P-  101 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-----------------~-~~~dl~~~~~~~~v~~~~~t-~-  101 (353)
                      |||.|+||+|++|++++..|++.|+  +|+.+|.....                 . ....+... ....+..+.+. + 
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~--~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~Dl~d   78 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNY--EVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL-TGKSIELYVGDICD   78 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH-HCCCCEEEESCTTS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC--EEEEEecCCcccccccccccccccccchHHHHHHHHhh-cCCCcEEEEccCCC
Confidence            7999999999999999999999998  99999942100                 0 00001000 01233333221 1 


Q ss_pred             --chhhhhCC--CcEEEEcCCCCCCC--CCC---HHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCch-hHHH-HH
Q 018618          102 --QLENALTG--MDLVIIPAGVPRKP--GMT---RDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNST-VPIA-AE  170 (353)
Q Consensus       102 --d~~~al~~--ADiVIi~ag~~~~~--g~~---r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~-t~~~-~~  170 (353)
                        .+++++++  .|+|+++|+....+  -.+   ..+....|+....++.+.+++++....++..|.-+... .... .+
T Consensus        79 ~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~  158 (393)
T d1i24a_          79 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEE  158 (393)
T ss_dssp             HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCS
T ss_pred             HHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccc
Confidence              23445554  49999998754211  122   23566889999999999999999887776665422110 0000 00


Q ss_pred             HHH----------HhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecC
Q 018618          171 VFK----------KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHA  218 (353)
Q Consensus       171 ~~~----------~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg  218 (353)
                      ...          ......|...+|.+.+....+-..+++..+++...++ ..++|.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~  217 (393)
T d1i24a_         159 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKT  217 (393)
T ss_dssp             SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCC
T ss_pred             ccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCc
Confidence            000          0001223345777766666666777888888766664 55777544

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=8.6e-06  Score=74.46  Aligned_cols=168  Identities=13%  Similarity=0.040  Sum_probs=98.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC----Cc-hhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ----PQ-LENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t----~d-~~~al~~ADiVIi~  116 (353)
                      |||.|+||+|++|++++..|+..|.. +|+.+|..... . ..+..   .+.++.+.+.    .+ .+.+++++|+||++
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~-~V~~ld~~~~~-~-~~~~~---~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~   74 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDA-I-SRFLN---HPHFHFVEGDISIHSEWIEYHVKKCDVVLPL   74 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGG-G-GGGTT---CTTEEEEECCTTTCSHHHHHHHHHCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCC-EEEEEeCCCcc-h-hhhcc---CCCeEEEECccCChHHHHHHHHhCCCccccc
Confidence            79999999999999999988888743 89999986411 0 01111   2334443221    12 23477899999999


Q ss_pred             CCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC------CCchhHHHHHHHHHhCCCCCCceEeech
Q 018618          117 AGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP------VNSTVPIAAEVFKKAGTYDPKKLLGVTM  188 (353)
Q Consensus       117 ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP------v~~~t~~~~~~~~~~~~~~~~kviG~t~  188 (353)
                      |+......  ......+..|+....++++.+.+....-+ +..|.-      ....... ........-..|...+|.+.
T Consensus        75 a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~~~~-~~ss~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~Y~~sK  152 (342)
T d2blla1          75 VAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRII-FPSTSEVYGMCSDKYFDED-HSNLIVGPVNKPRWIYSVSK  152 (342)
T ss_dssp             BCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCEEE-EECCGGGGBTCCCSSBCTT-TCCCBCCCTTCGGGHHHHHH
T ss_pred             cccccccccccCCcccccccccccccccccccccccccc-ccccccccccccccccccc-cccccccccCCCcchhhhcc
Confidence            87543221  12345678999999999999988765432 222211      1000000 00000000112334567776


Q ss_pred             hhHHHHHHHHHHHhCCCCCCC-cceEEeec
Q 018618          189 LDVVRANTFVAEVLGLDPRDV-DVPVVGGH  217 (353)
Q Consensus       189 ld~~R~~~~lA~~l~v~~~~v-~~~viG~h  217 (353)
                      +...++-...++..|++..-+ ...+.|..
T Consensus       153 ~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~  182 (342)
T d2blla1         153 QLLDRVIWAYGEKEGLQFTLFRPFNWMGPR  182 (342)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEEEECSEECSS
T ss_pred             cchhhhhhhhhcccCceeEEeecccccccc
Confidence            666777778888888875544 24455543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.98  E-value=6.8e-06  Score=67.79  Aligned_cols=64  Identities=20%  Similarity=0.253  Sum_probs=48.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||. |.+|+.+|..|+..|+  +|..+|+++.  .+.++....  .  ..   ..+.+++++++|+||++.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~--~V~~~d~~~~--~~~~~~~~~--~--~~---~~~~~e~~~~~d~ii~~v   64 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGY--SLVVSDRNPE--AIADVIAAG--A--ET---ASTAKAIAEQCDVIITML   64 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHH--HHHHHHHTT--C--EE---CSSHHHHHHHCSEEEECC
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCC--eEEEEeCCcc--hhHHHHHhh--h--hh---cccHHHHHhCCCeEEEEc
Confidence            79999999 9999999999999998  9999998752  222333321  1  11   245678899999999984

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.95  E-value=2.6e-05  Score=72.49  Aligned_cols=176  Identities=15%  Similarity=0.131  Sum_probs=103.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHh-CCCCcEEEEEeCCC----------c-HHHHHHHhcCC------CCCeEEEEeCC-C
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKI-NPLVSVLHLYDVVN----------T-PGVTADISHMD------TGAVVRGFLGQ-P  101 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~-~~~~~el~L~D~~~----------~-~~~~~dl~~~~------~~~~v~~~~~t-~  101 (353)
                      -|||.|+||+|++|++++..|++ .++  +|+++|.-.          . ......+....      ....+..+.+. .
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~--~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~   79 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH--SVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVR   79 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC--EEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTT
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC--EEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECccc
Confidence            48999999999999999987765 677  999999411          1 12222222211      11223332221 2


Q ss_pred             c---hhhhh---CCCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHH-
Q 018618          102 Q---LENAL---TGMDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF-  172 (353)
Q Consensus       102 d---~~~al---~~ADiVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~-  172 (353)
                      |   +++++   +++|+|+++|+......  .........|.....++.+..++..+...+...+--+....... ... 
T Consensus        80 d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~-~~~~  158 (383)
T d1gy8a_          80 NEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMG-SVST  158 (383)
T ss_dssp             CHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC------
T ss_pred             CHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccc-cccc
Confidence            2   23333   57899999987543211  13445678899999999999998886655544321110000000 000 


Q ss_pred             -----HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018618          173 -----KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  219 (353)
Q Consensus       173 -----~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~  219 (353)
                           ....-..|...+|.+.+...++-..+.+..|++...++ +.++|....
T Consensus       159 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         159 NAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHED  211 (383)
T ss_dssp             CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTT
T ss_pred             cccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCcc
Confidence                 01112344566777777777787888888898776664 567885443

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.94  E-value=1.2e-05  Score=73.82  Aligned_cols=113  Identities=18%  Similarity=0.067  Sum_probs=73.3

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHH--HHHHHhcCCCCCeEEE-EeCCCchhhhhC--CCcEEE
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPG--VTADISHMDTGAVVRG-FLGQPQLENALT--GMDLVI  114 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~--~~~dl~~~~~~~~v~~-~~~t~d~~~al~--~ADiVI  114 (353)
                      .|.|+||+|++|++++..|+..|+  +|+.+|...   ...  ....+.+... ..+.. +....+++.+++  +.|+||
T Consensus         3 ~ILVTGatGfIG~~lv~~Ll~~g~--~V~~~d~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~l~~~~~~~~~d~Vi   79 (347)
T d1z45a2           3 IVLVTGGAGYIGSHTVVELIENGY--DCVVADNLSNSTYDSVARLEVLTKHHI-PFYEVDLCDRKGLEKVFKEYKIDSVI   79 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSSCCTHHHHHHHHHHTSCC-CEEECCTTCHHHHHHHHHHSCCCEEE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCcC--eEEEEECCCCcchhHHHhHHhhcccCC-eEEEeecCCHHHHHHHHhccCCCEEE
Confidence            588999999999999999999998  999999643   111  1122222111 11211 000123334444  789999


Q ss_pred             EcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          115 IPAGVPRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       115 i~ag~~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ++|+....  ..+....+...|......+.+..++.....++...|
T Consensus        80 hlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS  125 (347)
T d1z45a2          80 HFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSS  125 (347)
T ss_dssp             ECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred             EccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecc
Confidence            99876521  123445667889999999999999887666555554

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=97.91  E-value=7.6e-05  Score=68.24  Aligned_cols=103  Identities=15%  Similarity=0.016  Sum_probs=69.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHH---HHHhcCCCCCeEEEE----eCCCchhhhhCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVT---ADISHMDTGAVVRGF----LGQPQLENALTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~---~dl~~~~~~~~v~~~----~~t~d~~~al~~ADiV  113 (353)
                      .||.|+||+|++|++++..|++.|+  +|+...++.. ....   .+....  ......+    .....+.+++.++|.|
T Consensus        12 k~VlVTG~sGfIGs~l~~~Ll~~G~--~V~~~vR~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~v   87 (342)
T d1y1pa1          12 SLVLVTGANGFVASHVVEQLLEHGY--KVRGTARSASKLANLQKRWDAKYP--GRFETAVVEDMLKQGAYDEVIKGAAGV   87 (342)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHST--TTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEeCCchhHHHHHHhhhcccc--ccccEEEeccccchhhhhhhcccchhh
Confidence            5999999999999999999999998  8776665431 1111   111111  1122211    1123456789999999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      +..++.. ....+...+...|+....++.+.+.++.
T Consensus        88 ~~~a~~~-~~~~~~~~~~~~nv~gt~~ll~~~~~~~  122 (342)
T d1y1pa1          88 AHIASVV-SFSNKYDEVVTPAIGGTLNALRAAAATP  122 (342)
T ss_dssp             EECCCCC-SCCSCHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred             hhhcccc-cccccccccccchhhhHHHHHHhhhccc
Confidence            9987644 2344556667789999999999998874

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.87  E-value=5.1e-05  Score=62.51  Aligned_cols=95  Identities=17%  Similarity=0.173  Sum_probs=60.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .||+|||+ |.+|.++|..|...++..+|+.+|.++ ....+.+...    ... .. . ........++|+||++.-  
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~----~~~-~~-~-~~~~~~~~~~dlIila~p--   71 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI----IDE-GT-T-SIAKVEDFSPDFVMLSSP--   71 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS----CSE-EE-S-CGGGGGGTCCSEEEECSC--
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhc----chh-hh-h-hhhhhhccccccccccCC--
Confidence            47999998 999999999999998766999999876 2222222221    111 11 1 122345578999999842  


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNP  160 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNP  160 (353)
                                    ...+.++.+.+..+. ++.+++-++..
T Consensus        72 --------------~~~~~~vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          72 --------------VRTFREIAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             --------------HHHHHHHHHHHHHHSCTTCEEEECCSC
T ss_pred             --------------chhhhhhhhhhhccccccccccccccc
Confidence                          122445555666554 67777666554

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=97.81  E-value=2.2e-05  Score=70.72  Aligned_cols=160  Identities=14%  Similarity=0.098  Sum_probs=95.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhh--hCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA--LTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~a--l~~ADiVIi~ag~  119 (353)
                      +||.|+||+|++|++++..|++.|+  +++++|....    .|+.+.            ..+++.  -.+.|+|++.++.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~--~vi~~~~~~~----~~~~~~------------~~~~~~~~~~~~d~v~~~a~~   64 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD--VELVLRTRDE----LNLLDS------------RAVHDFFASERIDQVYLAAAK   64 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT--EEEECCCTTT----CCTTCH------------HHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC--EEEEecCchh----ccccCH------------HHHHHHHhhcCCCEEEEcchh
Confidence            4999999999999999999999987  6677765431    011110            011111  2357888888754


Q ss_pred             CCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhH--HHHHH-HHHhCCCCCCceEeechhhHHH
Q 018618          120 PRKP---GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP--IAAEV-FKKAGTYDPKKLLGVTMLDVVR  193 (353)
Q Consensus       120 ~~~~---g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~--~~~~~-~~~~~~~~~~kviG~t~ld~~R  193 (353)
                      ....   .....++...|+....++++.+.++.-.-+|...|.-+..-..  -+.+- ....+-.+++..+|.+.+...+
T Consensus        65 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~  144 (315)
T d1e6ua_          65 VGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIK  144 (315)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHH
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHH
Confidence            3111   1235567788999999999999988654444443322210000  00000 0000112223357777777777


Q ss_pred             HHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018618          194 ANTFVAEVLGLDPRDVD-VPVVGGHAG  219 (353)
Q Consensus       194 ~~~~lA~~l~v~~~~v~-~~viG~hg~  219 (353)
                      +-..+++..|++..-++ ..|+|.++.
T Consensus       145 ~~~~~~~~~gl~~~ilR~~~vyGp~~~  171 (315)
T d1e6ua_         145 LCESYNRQYGRDYRSVMPTNLYGPHDN  171 (315)
T ss_dssp             HHHHHHHHHCCEEEEEEECEEESTTCC
T ss_pred             HHHHHHHHhCCCEEEEeeccEECCCCC
Confidence            77777888888766665 678887654

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.80  E-value=1.3e-05  Score=67.92  Aligned_cols=107  Identities=19%  Similarity=0.262  Sum_probs=63.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC--------------CCCeEEEEeCCCchhhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD--------------TGAVVRGFLGQPQLENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~--------------~~~~v~~~~~t~d~~~al  107 (353)
                      |||+|||. |+||..+|..++ .|+  +|+.||+++.  ....|....              .......   +++...+.
T Consensus         1 MkI~ViGl-G~vGl~~a~~~a-~g~--~V~g~Din~~--~v~~l~~g~~p~~e~~l~~~~~~~~~~~~~---~~~~~~~~   71 (196)
T d1dlja2           1 MKIAVAGS-GYVGLSLGVLLS-LQN--EVTIVDILPS--KVDKINNGLSPIQDEYIEYYLKSKQLSIKA---TLDSKAAY   71 (196)
T ss_dssp             CEEEEECC-SHHHHHHHHHHT-TTS--EEEEECSCHH--HHHHHHTTCCSSCCHHHHHHHHHSCCCEEE---ESCHHHHH
T ss_pred             CEEEEECC-ChhHHHHHHHHH-CCC--cEEEEECCHH--HHHHHhhcccccchhhHHHHhhhhhhhhhc---cchhhhhh
Confidence            89999998 999999997775 577  9999999861  111122110              0122222   23456788


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCC
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVN  162 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~  162 (353)
                      .++|+|+++...|.....+..     ....+....+.+....+...+++-| -|..
T Consensus        72 ~~~~ii~v~vpt~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~iii~Stv~pg  122 (196)
T d1dlja2          72 KEAELVIIATPTNYNSRINYF-----DTQHVETVIKEVLSVNSHATLIIKSTIPIG  122 (196)
T ss_dssp             HHCSEEEECCCCCEETTTTEE-----CCHHHHHHHHHHHHHCSSCEEEECSCCCTT
T ss_pred             hccccccccCCccccccCCCc-----ceeEEeehhhhhhhcccceeEEeeeecCce
Confidence            999999998766542211111     1223444555555566666655543 4444

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.77  E-value=4.3e-05  Score=62.85  Aligned_cols=65  Identities=22%  Similarity=0.380  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ++||++||. |.+|+.+|..|.+.|+  +|..+|++..  ...++.....   ..    ..+..++++++|+|++..
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~--~v~~~d~~~~--~~~~~~~~~~---~~----~~~~~e~~~~~diii~~v   65 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGY--LLNVFDLVQS--AVDGLVAAGA---SA----ARSARDAVQGADVVISML   65 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTC--EEEEECSSHH--HHHHHHHTTC---EE----CSSHHHHHTSCSEEEECC
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCC--eEEEEECchh--hhhhhhhhhc---cc----cchhhhhccccCeeeecc
Confidence            469999999 9999999999999998  9999998752  2233333221   11    245678999999999974

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.76  E-value=5.2e-05  Score=68.23  Aligned_cols=172  Identities=15%  Similarity=0.034  Sum_probs=99.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-Cch---hhhh--CCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQL---ENAL--TGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~d~---~~al--~~ADiVIi  115 (353)
                      +||.|+||+|++|++++..|++.|+  +|+.+|..........+.+....+.++.+... .|.   .+.+  ...++++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~   78 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY--RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   78 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC--EEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccc
Confidence            3899999999999999999999998  99999986511111122222222344443221 222   1112  24566776


Q ss_pred             cCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC-CCchhHHHHHHHHHhCCCCCCceEeechhhHH
Q 018618          116 PAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP-VNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVV  192 (353)
Q Consensus       116 ~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~  192 (353)
                      +++.....  ..........|+....++.+.++++.+..+++..|.- +......  ......+-+.+...+|.+.+...
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~--~~~~E~~~~~p~~~Y~~sK~~~E  156 (321)
T d1rpna_          79 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQA--ERQDENTPFYPRSPYGVAKLYGH  156 (321)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSS--SSBCTTSCCCCCSHHHHHHHHHH
T ss_pred             ccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccC--CCCCCCCCccccChhHHHHHHHH
Confidence            65443211  1345667888999999999999999877666655321 1000000  00001112334455677766666


Q ss_pred             HHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          193 RANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       193 R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      ++...+++..+++...++ +.++|..
T Consensus       157 ~~~~~~~~~~~~~~~~lr~~~vyGp~  182 (321)
T d1rpna_         157 WITVNYRESFGLHASSGILFNHESPL  182 (321)
T ss_dssp             HHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             HHHHHHHhhcCCcEEEEEEecccCCC
Confidence            777777788887654443 3466643

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=5.6e-05  Score=68.79  Aligned_cols=166  Identities=13%  Similarity=0.048  Sum_probs=98.4

Q ss_pred             CeE-EEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-c--HHHHHHHhcC---CCCCeEEEEeCC-Cc---hhhhh--C
Q 018618           42 FKV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-T--PGVTADISHM---DTGAVVRGFLGQ-PQ---LENAL--T  108 (353)
Q Consensus        42 ~KI-~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~--~~~~~dl~~~---~~~~~v~~~~~t-~d---~~~al--~  108 (353)
                      +|| .|+||+|++|++++..|+..|+  +|+-+|+.. .  .+...++...   .....++.+.+. +|   +..++  .
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~--~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY--EVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV   78 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC--EEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc
Confidence            389 6999999999999999999998  999999864 1  1111111111   111234443221 12   22333  3


Q ss_pred             CCcEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCC-C-cEEEEec------CCCC-chhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCP-N-ATVNLIS------NPVN-STVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p-~-a~viv~t------NPv~-~~t~~~~~~~~~~~~  177 (353)
                      +.++|+..++.....  -....++...|+....++.+.+++++. + ..++.+|      +|-. .+        ....-
T Consensus        79 ~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~--------~E~~~  150 (347)
T d1t2aa_          79 KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQ--------KETTP  150 (347)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSB--------CTTSC
T ss_pred             ccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCC--------CCCCC
Confidence            556777776543211  123456678899999999999998763 3 4555554      1111 11        11222


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeec
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGH  217 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~h  217 (353)
                      +.|...+|.+.+...++-..+++..+++...++ ..++|..
T Consensus       151 ~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         151 FYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPR  191 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTT
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCC
Confidence            445667888877777777777788887654443 4567754

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.72  E-value=2.4e-05  Score=63.85  Aligned_cols=63  Identities=17%  Similarity=0.295  Sum_probs=47.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||+ |.+|++++..|...+.  ++.++|++..  +.....+.       +.   ...+.++++++||+||++.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~--~i~v~~r~~~~~~~l~~~~g-------~~---~~~~~~~~~~~~dvIilav   65 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPH--ELIISGSSLERSKEIAEQLA-------LP---YAMSHQDLIDQVDLVILGI   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSC--EEEEECSSHHHHHHHHHHHT-------CC---BCSSHHHHHHTCSEEEECS
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCC--eEEEEcChHHhHHhhccccc-------ee---eechhhhhhhccceeeeec
Confidence            79999999 9999999999988877  9999998652  22222221       11   1246678899999999985

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=97.70  E-value=2.5e-05  Score=71.46  Aligned_cols=113  Identities=17%  Similarity=0.173  Sum_probs=72.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCC-Cc---hhhhhC--CCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQ-PQ---LENALT--GMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t-~d---~~~al~--~ADi  112 (353)
                      .+||.|+||+|++|++++..|++.|+  +|..+|++.  ..... +.....  ..++...+. +|   +.++++  ..|+
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~--~V~~~~r~~~~~~~~~-~~~~~~--~~i~~~~~Dl~d~~~l~~~~~~~~~~~   82 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGA--TVKGYSLTAPTVPSLF-ETARVA--DGMQSEIGDIRDQNKLLESIREFQPEI   82 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCSSSSCHH-HHTTTT--TTSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCCCccHHHH-hhhhcc--cCCeEEEeeccChHhhhhhhhhchhhh
Confidence            36999999999999999999999998  999999876  22221 111111  122322111 22   234444  4588


Q ss_pred             EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          113 VIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       113 VIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      |+.+++.+...  ...-......|+....++.+.+.+......++..|
T Consensus        83 v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s  130 (356)
T d1rkxa_          83 VFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNIT  130 (356)
T ss_dssp             EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred             hhhhhccccccccccCCccccccccccchhhhhhhhcccccccccccc
Confidence            88887654211  11234566789999999999999887655555443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.64  E-value=1.9e-05  Score=67.34  Aligned_cols=106  Identities=11%  Similarity=0.081  Sum_probs=68.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-Cc-hhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ-LENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~d-~~~al~~ADiVIi~ag  118 (353)
                      ++||.|+||+|++|++++..|.+.+...+|+...++...       .   .+.+...... .+ ......+.|.|+.++|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~---~~~~~~~~~d~~~~~~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------E---HPRLDNPVGPLAELLPQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------C---CTTEECCBSCHHHHGGGCCSCCSEEEECCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------h---cccccccccchhhhhhccccchheeeeeee
Confidence            469999999999999999999998876567666554311       0   1122211000 01 1222356799999887


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEE
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNL  156 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv  156 (353)
                      ..........++...|......+++..++.....++.+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~  109 (212)
T d2a35a1          72 TTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVV  109 (212)
T ss_dssp             CCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEE
T ss_pred             eeccccccccccccchhhhhhhcccccccccccccccc
Confidence            55333334556778888988999998887655544433

>d1up7a2 d.162.1.2 (A:163-415) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.56  E-value=0.00041  Score=61.18  Aligned_cols=80  Identities=9%  Similarity=-0.017  Sum_probs=59.2

Q ss_pred             CCcccchHHHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHH
Q 018618          261 AGSATLSMAYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKA  336 (353)
Q Consensus       261 kg~~~~s~A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s  336 (353)
                      ++...+  +..++++|++|.+|.+   .++.+. -++|.+   |+++++++||+|+++|+.++.. ++|++...+++..-
T Consensus       127 ~~~~~~--~e~a~~ii~ai~~~~~---~~~~vNv~N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~  200 (253)
T d1up7a2         127 RGGSMY--STAAAHLIRDLETDEG---KIHIVNTRNNGSIENLPDDYVLEIPCYVRSGRVHTLSQ-GKGDHFALSFIHAV  200 (253)
T ss_dssp             STTTTH--HHHHHHHHHHHHSSSC---EEEEEEEECTTSSTTSCTTCEEEEEEEEETTEEEEBCC-CCCCHHHHHHHHHH
T ss_pred             ccCcch--HHHHHHHHHHHHcCCC---cEEEEeCCCcCcCCCCChhhheEEEEEecCCccccccc-CCCcHHHHHHHHHH
Confidence            344445  4778999999999976   344444 467875   8899999999999999999777 69999988887664


Q ss_pred             HHHHHHHHHH
Q 018618          337 KKELAGSIQK  346 (353)
Q Consensus       337 ~~~l~~~~~~  346 (353)
                      ...-+-.++.
T Consensus       201 ~~~e~L~veA  210 (253)
T d1up7a2         201 KMYERLTIEA  210 (253)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            4433333333

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.55  E-value=0.00014  Score=61.50  Aligned_cols=110  Identities=15%  Similarity=0.026  Sum_probs=66.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEE-EeCCCchhhhhCCCcEEEEcCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRG-FLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~-~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      +.+|.|+||+|++|++++..|++.|+...++.+++++.  ...++....  ..+.. .....++.++++++|.||++++.
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~--~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQ--GKEKIGGEA--DVFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHH--HHHHTTCCT--TEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHH--HHHhccCCc--EEEEeeeccccccccccccceeeEEEEee
Confidence            45999999999999999999999887334555554431  112222211  11111 11123456788999999998764


Q ss_pred             CCCC---------------CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEE
Q 018618          120 PRKP---------------GMTRDDLFNINAGIVRTLCEGIAKCCPNATV  154 (353)
Q Consensus       120 ~~~~---------------g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~v  154 (353)
                      ....               ..........|....+.++............
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (252)
T d2q46a1          79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIV  128 (252)
T ss_dssp             CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEE
T ss_pred             ccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccc
Confidence            3110               0112334566777777888777766654433

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.53  E-value=7.1e-05  Score=62.23  Aligned_cols=74  Identities=12%  Similarity=0.200  Sum_probs=47.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .|||+|||. |.+|+.++..|+..|+  +|+.+|+++.+  ............+.........+.-..+..++.++...
T Consensus         1 ~MkIGvIGl-G~MG~~ma~~L~~~G~--~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (178)
T d1pgja2           1 SMDVGVVGL-GVMGANLALNIAEKGF--KVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILV   76 (178)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECC
T ss_pred             CCEEEEEee-hHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEee
Confidence            489999999 9999999999999998  99999987622  22222222121223333211123334556777777763

>d1s6ya2 d.162.1.2 (A:173-445) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.50  E-value=0.00027  Score=63.00  Aligned_cols=75  Identities=12%  Similarity=0.056  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          269 AYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       269 A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      +..++++|++|.+|.+.   ++.+. .++|.+   |+++++++||+|+++|+.++.. ++|++..++++......-+-.+
T Consensus       145 ~e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~~~~e~L~v  220 (270)
T d1s6ya2         145 SDAACSLISSIYNDKRD---IQPVNTRNNGAIASISAESAVEVNCVITKDGPKPIAV-GDLPVAVRGLVQQIKSFERVAA  220 (270)
T ss_dssp             HHHHHHHHHHHHHTCCC---EEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCe---EEEEECCCCCcCCCCCccceEEEEEEEECCceEeeec-CCCcHHHHHHHHHHHHHHHHHH
Confidence            47889999999999763   44444 567875   8899999999999999999877 6999999988877554444344


Q ss_pred             HHh
Q 018618          345 QKG  347 (353)
Q Consensus       345 ~~~  347 (353)
                      +.+
T Consensus       221 eAa  223 (270)
T d1s6ya2         221 EAA  223 (270)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=0.00015  Score=66.02  Aligned_cols=111  Identities=19%  Similarity=0.102  Sum_probs=68.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--------cHHHHHHHhcCCCCCeEEEEeCC-Cc---hhhhhCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--------TPGVTADISHMDTGAVVRGFLGQ-PQ---LENALTG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--------~~~~~~dl~~~~~~~~v~~~~~t-~d---~~~al~~  109 (353)
                      .||.|+||+|++|++++..|+..|+  +|+.+|...        .......+.... ...+..+... +|   +++++.+
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~--~V~~ld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY--LPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC--CEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC--EEEEEECCCccccccccchHHHHHHHHhc-CCCcEEEEeeccccccccccccc
Confidence            3899999999999999999999998  899998522        111111111111 1223332221 23   3444545


Q ss_pred             Cc--EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEE
Q 018618          110 MD--LVIIPAGVPRKP--GMTRDDLFNINAGIVRTLCEGIAKCCPNATVN  155 (353)
Q Consensus       110 AD--iVIi~ag~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~vi  155 (353)
                      .|  +|+.+|+.+...  -....+.+..|+.....+...+++++..-++.
T Consensus        80 ~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~  129 (346)
T d1ek6a_          80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVF  129 (346)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             cccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccc
Confidence            54  566777654211  11345667889999999999999887554443

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=0.0019  Score=56.57  Aligned_cols=160  Identities=15%  Similarity=0.176  Sum_probs=93.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc----------hhhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ----------LENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d----------~~~al~  108 (353)
                      +.+.|+||++-+|..+|..|++.|.  .|++.|+++  ++..+.++........+..+.. -+|          ..+.+.
T Consensus        11 Kv~lITGas~GIG~aiA~~la~~G~--~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_          11 RLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            3688889999999999999999998  999999876  3444555654432233333211 122          123356


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHH----HHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNIN----AGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N----~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .-|++|..+|.....   ..+   ....+..|    ....+.+++.+++.. ..+.||+++-.....            +
T Consensus        89 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~------------~  156 (257)
T d1xg5a_          89 GVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR------------V  156 (257)
T ss_dssp             CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS------------C
T ss_pred             CCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcC------------C
Confidence            789999998864321   122   22334445    445566777776665 467777776543211            1


Q ss_pred             CCCC--ceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPK--KLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~--kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..  -.++.+.-.-..+-+.+|..|.-.+..|++..+.
T Consensus       157 ~p~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~  196 (257)
T d1xg5a_         157 LPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCIS  196 (257)
T ss_dssp             CSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             CCCcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEe
Confidence            1111  1123332233446677777775455667666654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00021  Score=57.90  Aligned_cols=97  Identities=11%  Similarity=0.108  Sum_probs=60.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC--CCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP--LVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~--~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +.||+|+||+|.||+-+...|++.+  ...++.++......+.........  ..+..   ..+ .+++.++|+++++.+
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~--~~~~~---~~~-~~~~~~~DivF~a~~   74 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTT--GTLQD---AFD-LEALKALDIIVTCQG   74 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCC--CBCEE---TTC-HHHHHTCSEEEECSC
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCc--eeeec---ccc-hhhhhcCcEEEEecC
Confidence            3599999999999999997766654  246888888665222211111111  11111   234 357899999999863


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                                      .+..+++++.+.+.+.+++|  +.|..
T Consensus        75 ----------------~~~s~~~~~~~~~~g~~~~V--ID~Ss   99 (146)
T d1t4ba1          75 ----------------GDYTNEIYPKLRESGWQGYW--IDAAS   99 (146)
T ss_dssp             ----------------HHHHHHHHHHHHHTTCCCEE--EECSS
T ss_pred             ----------------chHHHHhhHHHHhcCCCeec--ccCCc
Confidence                            33456777777766655554  44443

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.43  E-value=7e-05  Score=60.78  Aligned_cols=64  Identities=17%  Similarity=0.181  Sum_probs=46.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||+|||. |.+|+.++..|.+.|+  ++..+|.+....... .....   .+.     .+..+++++||+||++.
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~--~v~~~~~~~~~~~~~-~~~~~---~~~-----~~~~e~~~~~diIi~~v   64 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGV--EVVTSLEGRSPSTIE-RARTV---GVT-----ETSEEDVYSCPVVISAV   64 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTC--EEEECCTTCCHHHHH-HHHHH---TCE-----ECCHHHHHTSSEEEECS
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCC--eEEEEcCchhHHHHH-hhhcc---ccc-----ccHHHHHhhcCeEEEEe
Confidence            79999998 9999999999999998  889999766222111 11111   111     12368899999999984

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.42  E-value=0.0002  Score=59.46  Aligned_cols=96  Identities=16%  Similarity=0.176  Sum_probs=61.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCC-CCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMD-TGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~-~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      +|+|||. |.||+.+|..|...|+  +|+.+|+++.+  ..++.... ............+..+++.++|.++++...  
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~--~V~v~dr~~~~--~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~--   76 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGF--VVCAFNRTVSK--VDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKA--   76 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSTHH--HHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCT--
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCC--eEEEEcCCHHH--HHHHHHhccccccccchhhhhhhhhhhcccceEEEecCc--
Confidence            7999999 9999999999999998  99999997722  22332221 111222221224556788999999997421  


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEec
Q 018618          122 KPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLIS  158 (353)
Q Consensus       122 ~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~t  158 (353)
                                   .+.+.++...+.... |+.++|..|
T Consensus        77 -------------~~~v~~v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          77 -------------GQAVDNFIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             -------------THHHHHHHHHHHHHCCTTCEEEECS
T ss_pred             -------------hHHHHHHHHHHHhccccCcEEEecC
Confidence                         122344455555555 556666554

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.41  E-value=0.00077  Score=54.43  Aligned_cols=111  Identities=12%  Similarity=0.122  Sum_probs=69.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCC-C-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINP-L-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~-~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      |||+|+||+|++|+-+...|.... + ..++.++......+...++.    ....... ...+ .+.++++|+|+++.+ 
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~----~~~~~~~-~~~~-~~~~~~~DvvF~alp-   73 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFG----KDAGMLH-DAFD-IESLKQLDAVITCQG-   73 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSS----SCCCBCE-ETTC-HHHHTTCSEEEECSC-
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccC----Ccceeee-cccc-hhhhccccEEEEecC-
Confidence            799999999999999997766543 2 45888887654222211111    1111111 1234 467899999999853 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechh
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  189 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~l  189 (353)
                                     -...+++++.+.+.+.+++|  +.|..|.             +++++-++++.-+
T Consensus        74 ---------------~~~s~~~~~~l~~~g~~~~V--IDlSsdf-------------R~~~dvpl~lPEi  113 (147)
T d1mb4a1          74 ---------------GSYTEKVYPALRQAGWKGYW--IDAASTL-------------RMDKEAIITLDPV  113 (147)
T ss_dssp             ---------------HHHHHHHHHHHHHTTCCSEE--EESSSTT-------------TTCTTEEEECHHH
T ss_pred             ---------------chHHHHHhHHHHHcCCceEE--EeCCccc-------------cccCCceEEeCCc
Confidence                           23356788888877777755  4554431             3666777887543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.39  E-value=0.00018  Score=65.02  Aligned_cols=172  Identities=13%  Similarity=0.026  Sum_probs=95.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----cH---HHHHHHhcCCCCCeEEEEeC-CCch---hhhh--C
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----TP---GVTADISHMDTGAVVRGFLG-QPQL---ENAL--T  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----~~---~~~~dl~~~~~~~~v~~~~~-t~d~---~~al--~  108 (353)
                      .|+.|+||+|++|++++..|++.|+  +|+.+|...    ..   ....+..... ...+..... -++.   +.++  .
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~~~~~~~~~~   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY--EVHGLIRRSSNFNTQRINHIYIDPHNVN-KALMKLHYADLTDASSLRRWIDVI   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC--EEEEEECCCcccchhhhhhhhhhhhhcc-ccceEEEEccccCHHHHHHHHhhh
Confidence            3899999999999999999999998  999999743    10   0001111111 122333211 1222   2223  4


Q ss_pred             CCcEEEEcCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhhC----CCcEEEEecCC-CCchhHHHHHHHHHhCCCCCC
Q 018618          109 GMDLVIIPAGVPRKPG--MTRDDLFNINAGIVRTLCEGIAKCC----PNATVNLISNP-VNSTVPIAAEVFKKAGTYDPK  181 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g--~~r~~~~~~N~~i~~~i~~~i~~~~----p~a~viv~tNP-v~~~t~~~~~~~~~~~~~~~~  181 (353)
                      +.|+|+++|+......  .........|......+...+++.+    ...+++..+.. +.....   .......-+.|.
T Consensus        79 ~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~---~~~~E~~~~~p~  155 (339)
T d1n7ha_          79 KPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTP---PPQSETTPFHPR  155 (339)
T ss_dssp             CCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSC---SSBCTTSCCCCC
T ss_pred             ccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCC---CCCCCCCCCCCc
Confidence            6799999987543211  2334556777777777777776543    22334333211 100000   000111224456


Q ss_pred             ceEeechhhHHHHHHHHHHHhCCCCCCCc-ceEEeecCC
Q 018618          182 KLLGVTMLDVVRANTFVAEVLGLDPRDVD-VPVVGGHAG  219 (353)
Q Consensus       182 kviG~t~ld~~R~~~~lA~~l~v~~~~v~-~~viG~hg~  219 (353)
                      ..+|.+.+...++-...++..+++..-++ ..|+|.++.
T Consensus       156 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~  194 (339)
T d1n7ha_         156 SPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRG  194 (339)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSC
T ss_pred             chhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCC
Confidence            67788777777777777888887655553 557886543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.35  E-value=8.5e-05  Score=65.18  Aligned_cols=90  Identities=21%  Similarity=0.203  Sum_probs=59.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag  118 (353)
                      .|||.|+||+|++|++++..|...|+  +|+.+|+++.     |+.+.            .+.++.++  +.|+||.+++
T Consensus         1 ~MKIlItGasGfiG~~l~~~L~~~g~--~Vi~~~r~~~-----D~~d~------------~~~~~~l~~~~~d~vih~a~   61 (281)
T d1vl0a_           1 HMKILITGANGQLGREIQKQLKGKNV--EVIPTDVQDL-----DITNV------------LAVNKFFNEKKPNVVINCAA   61 (281)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSE--EEEEECTTTC-----CTTCH------------HHHHHHHHHHCCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC--EEEEeechhc-----cCCCH------------HHHHHHHHHcCCCEEEeecc
Confidence            38999999999999999999999998  9999997641     11110            12234443  6699999876


Q ss_pred             CCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhC
Q 018618          119 VPRKP--GMTRDDLFNINAGIVRTLCEGIAKCC  149 (353)
Q Consensus       119 ~~~~~--g~~r~~~~~~N~~i~~~i~~~i~~~~  149 (353)
                      .....  ..........|......+.+......
T Consensus        62 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~   94 (281)
T d1vl0a_          62 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG   94 (281)
T ss_dssp             CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred             ccccccccccchhhccccccccccccccccccc
Confidence            44211  11234445667777767766666554

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.33  E-value=0.00062  Score=53.52  Aligned_cols=98  Identities=21%  Similarity=0.235  Sum_probs=59.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc-CCCCCeEEEEeCCCch---h-hhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MDTGAVVRGFLGQPQL---E-NALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~-~~~~~~v~~~~~t~d~---~-~al~~ADiVIi~  116 (353)
                      |||.|+|+ |.+|+.++..|...|+  +++++|.++..  +..+.. ... ..+.+  ..+|.   + ..+++||.++.+
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~--~v~vid~d~~~--~~~~~~~~~~-~vi~G--d~~~~~~l~~~~i~~a~~vv~~   72 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGH--DIVLIDIDKDI--CKKASAEIDA-LVING--DCTKIKTLEDAGIEDADMYIAV   72 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHH--HHHHHHHCSS-EEEES--CTTSHHHHHHTTTTTCSEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--CcceecCChhh--hhhhhhhhhh-hhccC--cccchhhhhhcChhhhhhhccc
Confidence            89999999 9999999999999998  99999998621  112221 110 11221  11222   2 225899999987


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      ...         |  ..|+..    +...++++++-++..+.+|..
T Consensus        73 t~~---------d--~~N~~~----~~~~k~~~~~~iI~~~~~~~~  103 (132)
T d1lssa_          73 TGK---------E--EVNLMS----SLLAKSYGINKTIARISEIEY  103 (132)
T ss_dssp             CSC---------H--HHHHHH----HHHHHHTTCCCEEEECSSTTH
T ss_pred             CCc---------H--HHHHHH----HHHHHHcCCceEEEEecCHHH
Confidence            421         1  345422    223445677655555556653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=97.32  E-value=8.5e-05  Score=65.48  Aligned_cols=99  Identities=17%  Similarity=0.166  Sum_probs=64.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEEcCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVIIPAGV  119 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi~ag~  119 (353)
                      |||.|+||+|+||++++..|...+   +++.+|.+... ...|+.+            ..++++.++  +.|+||++||.
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g---~~v~~~~~~~~-~~~Dl~~------------~~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVG---NLIALDVHSKE-FCGDFSN------------PKGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTS---EEEEECTTCSS-SCCCTTC------------HHHHHHHHHHHCCSEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCC---CEEEEECCCcc-ccCcCCC------------HHHHHHHHHHcCCCEEEEeccc
Confidence            899999999999999999888776   55667765410 0001110            112344454  45999999875


Q ss_pred             CCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          120 PRK--PGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       120 ~~~--~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ...  ...........|......+.+...+.+  .+++++|
T Consensus        65 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~s  103 (298)
T d1n2sa_          65 TAVDKAESEPELAQLLNATSVEAIAKAANETG--AWVVHYS  103 (298)
T ss_dssp             CCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT--CEEEEEE
T ss_pred             ccccccccCccccccccccccccchhhhhccc--ccccccc
Confidence            421  123445566888888888888887664  3444443

>d1u8xx2 d.162.1.2 (X:170-445) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=97.31  E-value=0.00044  Score=61.75  Aligned_cols=75  Identities=13%  Similarity=0.079  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          269 AYAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERIGLEKAKKELAGSI  344 (353)
Q Consensus       269 A~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~~l~~s~~~l~~~~  344 (353)
                      +..+++++++|.+|.+.   ++.+. .++|.+   |+|+++++||+|+++|+.++-. ++|++..++++..-...-+-.+
T Consensus       152 ~e~av~ii~ai~~~~~~---~~~vNv~N~G~I~~Lp~d~vVEVp~~V~~~Gi~P~~~-g~lP~~~~~Li~~~k~~e~Ltv  227 (276)
T d1u8xx2         152 ASYIVDLARAIAYNTGE---RMLLIVENNGAIANFDPTAMVEVPCIVGSNGPEPITV-GTIPQFQKGLMEQQVSVEKLTV  227 (276)
T ss_dssp             THHHHHHHHHHHHTCCE---EEEEEEECTTSBTTSCTTSEEEEEEEEETTEEEECCC-BCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCc---EEEEEeCCCCcCCCCChhhheeeEEEEcCCceEeeec-CCCcHHHHHHHHHHHHHHHHHH
Confidence            45789999999999762   44344 577875   8899999999999999999777 6999999888876544433344


Q ss_pred             HHh
Q 018618          345 QKG  347 (353)
Q Consensus       345 ~~~  347 (353)
                      +.+
T Consensus       228 eAa  230 (276)
T d1u8xx2         228 EAW  230 (276)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.30  E-value=0.00016  Score=60.81  Aligned_cols=80  Identities=14%  Similarity=0.180  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcC-CCCCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHM-DTGAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~-~~~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      -+.++|.|+||+|.+|..++..|++.|.  +|+++|++.  ....+..+... ......-......+.++++.++|+||.
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGA--EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhcc--chhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            3456899999999999999999999997  999999986  22333333221 111111112222466778999999999


Q ss_pred             cCCCC
Q 018618          116 PAGVP  120 (353)
Q Consensus       116 ~ag~~  120 (353)
                      ++|.+
T Consensus        99 ~Ag~g  103 (191)
T d1luaa1          99 AGAIG  103 (191)
T ss_dssp             CCCTT
T ss_pred             cCccc
Confidence            98754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=97.28  E-value=7.9e-05  Score=60.50  Aligned_cols=65  Identities=15%  Similarity=0.119  Sum_probs=44.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |||++||+ |++|++++..|...+. .++.++|+++..  ..++....   .+...   ++. ++++++|+||++.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~-~~i~v~~r~~~~--~~~l~~~~---~~~~~---~~~-~~v~~~Div~lav   65 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGG-YRIYIANRGAEK--RERLEKEL---GVETS---ATL-PELHSDDVLILAV   65 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCS-CEEEEECSSHHH--HHHHHHHT---CCEEE---SSC-CCCCTTSEEEECS
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCC-CcEEEEeCChhH--HHHhhhhc---ccccc---ccc-ccccccceEEEec
Confidence            79999999 9999999987776652 399999987621  12232211   12222   233 5588999999985

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=97.23  E-value=0.00025  Score=62.61  Aligned_cols=77  Identities=16%  Similarity=0.060  Sum_probs=49.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGVTADISHMDTGAVVRGFLG----QPQLENALTGMDL  112 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADi  112 (353)
                      +++||.|+||+|++|++++..|+..|+  +|+.++++.  . ......+.... ...++.+.+    ..++.+++++++.
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~~~~~~~~-~~~v~~v~~d~~d~~~~~~~~~~~~~   78 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGH--PTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALKQVDV   78 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHTTCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEECCCcccchhHHHHHhhhc-cCCcEEEEeecccchhhhhhccCcch
Confidence            457999999999999999999999987  888888765  1 11111111110 011222111    1345578899999


Q ss_pred             EEEcCCC
Q 018618          113 VIIPAGV  119 (353)
Q Consensus       113 VIi~ag~  119 (353)
                      ++..++.
T Consensus        79 ~~~~~~~   85 (312)
T d1qyda_          79 VISALAG   85 (312)
T ss_dssp             EEECCCC
T ss_pred             hhhhhhh
Confidence            9997653

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=97.15  E-value=0.00029  Score=61.67  Aligned_cols=76  Identities=20%  Similarity=0.186  Sum_probs=49.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc----HHHHHHHhcCCCCCeEEEEeC----CCchhhhhCCCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGFLG----QPQLENALTGMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~----~~~~~dl~~~~~~~~v~~~~~----t~d~~~al~~ADi  112 (353)
                      ++||.|+||+|++|++++..|+..|+  +|+.++++..    ......+.... ...++.+.+    ..+..++++++|.
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~--~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGH--PTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKNVDV   79 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC--CEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHTCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhhhcee
Confidence            35999999999999999999999998  8999998661    11111111111 011222111    1234567899999


Q ss_pred             EEEcCCC
Q 018618          113 VIIPAGV  119 (353)
Q Consensus       113 VIi~ag~  119 (353)
                      |+..++.
T Consensus        80 vi~~~~~   86 (307)
T d1qyca_          80 VISTVGS   86 (307)
T ss_dssp             EEECCCG
T ss_pred             eeecccc
Confidence            9988653

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.12  E-value=0.00041  Score=54.51  Aligned_cols=68  Identities=12%  Similarity=0.147  Sum_probs=45.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC--CCchhhh-hCCCcEEEEcC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG--QPQLENA-LTGMDLVIIPA  117 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~--t~d~~~a-l~~ADiVIi~a  117 (353)
                      |+.|+|+ |.+|+.++..|...|.  +++++|.++.  .+.++.+..  ..+-.-..  ..-++++ +.+||.||++.
T Consensus         2 ~~iIiG~-G~~G~~la~~L~~~g~--~vvvid~d~~--~~~~~~~~~--~~~~~gd~~~~~~l~~a~i~~a~~vi~~~   72 (134)
T d2hmva1           2 QFAVIGL-GRFGGSIVKELHRMGH--EVLAVDINEE--KVNAYASYA--THAVIANATEENELLSLGIRNFEYVIVAI   72 (134)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTC--CCEEEESCHH--HHHHTTTTC--SEEEECCTTCTTHHHHHTGGGCSEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCC--eEEEecCcHH--HHHHHHHhC--CcceeeecccchhhhccCCccccEEEEEc
Confidence            7899999 9999999999999998  8999999762  222333322  12111111  1223333 78999988874

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.0006  Score=59.56  Aligned_cols=154  Identities=16%  Similarity=0.181  Sum_probs=88.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCc------hhhhhCCCcE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ------LENALTGMDL  112 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d------~~~al~~ADi  112 (353)
                      .+++.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++....   .+..  .-+|      .-+.+..-|+
T Consensus         7 GK~~lITGas~GIG~aia~~la~~G~--~V~~~~r~~~~l~~~~~~~~~~~---~~~~--Dv~d~~~v~~~~~~~g~iDi   79 (244)
T d1pr9a_           7 GRRVLVTGAGKGIGRGTVQALHATGA--RVVAVSRTQADLDSLVRECPGIE---PVCV--DLGDWEATERALGSVGPVDL   79 (244)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTTCE---EEEC--CTTCHHHHHHHHTTCCCCCE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcCCCe---EEEE--eCCCHHHHHHHHHHhCCceE
Confidence            35889999999999999999999998  999999976  233333332211   1110  1112      1234568899


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCc
Q 018618          113 VIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKK  182 (353)
Q Consensus       113 VIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~k  182 (353)
                      +|..+|.....   ..+   ....+..|+.    ..+.+++.+.+....+.|++++.-...            .+.|..-
T Consensus        80 lVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~------------~~~~~~~  147 (244)
T d1pr9a_          80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQ------------RAVTNHS  147 (244)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT------------SCCTTBH
T ss_pred             EEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeeccccccc------------ccccchh
Confidence            99998865322   122   2334455544    455556655544556777766542211            1122222


Q ss_pred             eEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          183 LLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       183 viG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .++.+.-....+-+.+|..++  +..|++-.+-
T Consensus       148 ~Y~asKaal~~lt~~lA~el~--~~gIrvN~I~  178 (244)
T d1pr9a_         148 VYCSTKGALDMLTKVMALELG--PHKIRVNAVN  178 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             hhhhhHHHHHHHHHHHHHHhC--CCcEEEEEEe
Confidence            333433334456778888874  5556555543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=97.00  E-value=0.0032  Score=56.89  Aligned_cols=104  Identities=14%  Similarity=0.144  Sum_probs=62.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-Cc----hhhhhCCCcEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-PQ----LENALTGMDLVI  114 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-~d----~~~al~~ADiVI  114 (353)
                      ++++|+|+||+|++|++++..|++.|+  +|+.+-++........+...   +.++.+.+. .|    +..+++++|.++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~--~V~~l~R~~~~~~~~~~~~~---~~v~~~~gD~~d~~~~~~~a~~~~~~~~   76 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH--HVRAQVHSLKGLIAEELQAI---PNVTLFQGPLLNNVPLMDTLFEGAHLAF   76 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC--CEEEEESCSCSHHHHHHHTS---TTEEEEESCCTTCHHHHHHHHTTCSEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC--eEEEEECCcchhhhhhhccc---CCCEEEEeeCCCcHHHHHHHhcCCceEE
Confidence            345999999999999999999999988  78888665522222233322   223332221 12    446789999988


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      +.....   .       ..+....+.++....+.+-.-+++..|
T Consensus        77 ~~~~~~---~-------~~~~~~~~~~~~aa~~agv~~~v~~Ss  110 (350)
T d1xgka_          77 INTTSQ---A-------GDEIAIGKDLADAAKRAGTIQHYIYSS  110 (350)
T ss_dssp             ECCCST---T-------SCHHHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred             eecccc---c-------chhhhhhhHHHHHHHHhCCCceEEEee
Confidence            864221   1       123334455666666665333444444

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.00  E-value=0.0046  Score=53.90  Aligned_cols=155  Identities=19%  Similarity=0.254  Sum_probs=88.9

Q ss_pred             eE-EEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           43 KV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        43 KI-~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      || .|+||++-+|..+|..|++.|.  .|++.|+++  ++..+.++.+..  .++..+. .-+|.          .+.+.
T Consensus         2 KValITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~i~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGF--AVAIADYNDATAKAVASEINQAG--GHAVAVKVDVSDRDQVFAAVEQARKTLG   77 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            76 6779988999999999999998  999999987  344455565432  2222221 11221          13346


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      .-|++|..||.....   ..+   ....+..|+.    ..+..++.+.+....+.|++++......            +.
T Consensus        78 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~------------~~  145 (255)
T d1gega_          78 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV------------GN  145 (255)
T ss_dssp             CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------CC
T ss_pred             CccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcc------------cC
Confidence            899999999864321   122   2334555654    4445556666666777777765432111            11


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      |..-.++.+.-.-..+-+.+|..++  +..|++-.+-
T Consensus       146 ~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I~  180 (255)
T d1gega_         146 PELAVYSSSKFAVRGLTQTAARDLA--PLGITVNGYC  180 (255)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             cccccchhCHHHHHhhHHHHHHHhh--hhCcEEEEEe
Confidence            1111223332233456677887774  4555544443

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.98  E-value=0.00036  Score=57.15  Aligned_cols=43  Identities=21%  Similarity=0.319  Sum_probs=35.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADIS   86 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~   86 (353)
                      |||+||||+|.+|.++|..|+..|+  +|++.++++  +...+.++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~--~V~l~~R~~e~~~~l~~~i~   45 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGH--EIVVGSRREEKAEAKAAEYR   45 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSHHHHHHHHHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHH
Confidence            8999996669999999999999999  999999986  334444444

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.94  E-value=0.0073  Score=52.52  Aligned_cols=157  Identities=15%  Similarity=0.059  Sum_probs=88.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++...   ..+..+. .-+|.          .+.+.
T Consensus         7 K~alVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           7 KVAIITGGTLGIGLAIATKFVEEGA--KVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCCC---CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4677789999999999999999998  999999876  33333344321   2222221 11221          13346


Q ss_pred             CCcEEEEcCCCCCCC---CCCHH---HHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMTRD---DLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r~---~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      .-|++|..+|.....   ..+..   ..+..|+.    ..+..++.+.+....+.||+++......            +.
T Consensus        82 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~------------~~  149 (251)
T d1zk4a1          82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFV------------GD  149 (251)
T ss_dssp             SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTS------------CC
T ss_pred             CceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceec------------cC
Confidence            789999998864321   22333   34455544    4555666666655556777776432211            22


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      |..-.++.+.-....+-+.+|..+...+..|++-.+-
T Consensus       150 ~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~  186 (251)
T d1zk4a1         150 PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVH  186 (251)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEe
Confidence            2222333433333345667776644455666554443

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.94  E-value=0.00095  Score=54.93  Aligned_cols=81  Identities=21%  Similarity=0.228  Sum_probs=55.7

Q ss_pred             ccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618           35 AKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        35 ~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      ...+.+|-||.|+|| |.+|.+-+...+..|-  .+..+|.+. ......+....  ..... ......+++++++||+|
T Consensus        26 g~~gv~pa~V~ViGa-GvaG~~A~~~A~~lGA--~V~~~D~~~~~l~~l~~~~~~--~~~~~-~~~~~~l~~~~~~aDiv   99 (168)
T d1pjca1          26 GVPGVKPGKVVILGG-GVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGS--RVELL-YSNSAEIETAVAEADLL   99 (168)
T ss_dssp             CBTTBCCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG--GSEEE-ECCHHHHHHHHHTCSEE
T ss_pred             CCCCCCCcEEEEECC-ChHHHHHHHHHhhCCC--EEEEEeCcHHHHHHHHHhhcc--cceee-hhhhhhHHHhhccCcEE
Confidence            345678899999999 9999998888887775  999999976 22222222111  11222 22234577899999999


Q ss_pred             EEcCCCCC
Q 018618          114 IIPAGVPR  121 (353)
Q Consensus       114 Ii~ag~~~  121 (353)
                      |-++-.|-
T Consensus       100 I~aalipG  107 (168)
T d1pjca1         100 IGAVLVPG  107 (168)
T ss_dssp             EECCCCTT
T ss_pred             EEeeecCC
Confidence            99987653

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=96.93  E-value=0.0014  Score=57.42  Aligned_cols=168  Identities=8%  Similarity=0.021  Sum_probs=89.7

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCC---chhhhhCCCcEEEEcCCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP---QLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~---d~~~al~~ADiVIi~ag~~  120 (353)
                      |.|+||+|++|++++..|++.|. .+|+.+|..........+.+... ..........   .....+.++++|+..|+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~-~~V~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~   79 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGI-TDILVVDNLKDGTKFVNLVDLNI-ADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTC-CCEEEEECCSSGGGGHHHHTSCC-SEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCC-CeEEEEECCCCcchhhcccccch-hhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence            78999999999999999999884 27888884331111112222221 1111100000   0012357888999988766


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHH
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE  200 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~  200 (353)
                      .............|......+.+.....+..  +++.+.......+. ..........++...+|.+.+....+...+++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~--~v~~ss~~~~~~~~-~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~  156 (307)
T d1eq2a_          80 STTEWDGKYMMDNNYQYSKELLHYCLEREIP--FLYASSAATYGGRT-SDFIESREYEKPLNVYGYSKFLFDEYVRQILP  156 (307)
T ss_dssp             CTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC--EEEEEEGGGGTTCC-SCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGG
T ss_pred             ccccccccccccccccccccccccccccccc--cccccccccccccc-ccccccccccccccccccccchhhhhcccccc
Confidence            5555566667777888888888888877644  22222111000000 00000000123334556655555555555666


Q ss_pred             HhCCCCCCCc-ceEEee
Q 018618          201 VLGLDPRDVD-VPVVGG  216 (353)
Q Consensus       201 ~l~v~~~~v~-~~viG~  216 (353)
                      ..+++...++ ..++|.
T Consensus       157 ~~~~~~~~~r~~~vyGp  173 (307)
T d1eq2a_         157 EANSQIVGFRYFNVYGP  173 (307)
T ss_dssp             GCSSCEEEEEECEEESS
T ss_pred             ccccccccccceeEeec
Confidence            6665544443 446664

>d1obba2 d.162.1.2 (A:173-480) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.85  E-value=0.0021  Score=58.10  Aligned_cols=61  Identities=13%  Similarity=0.039  Sum_probs=47.2

Q ss_pred             HHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCHHHHH-HHHH
Q 018618          272 AVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNEYERI-GLEK  335 (353)
Q Consensus       272 ~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~~E~~-~l~~  335 (353)
                      ++++|+||.+|++.   ++.+. -++|.+   |+|.++.+||+|+++|+.++.-.++|++.-++ ++..
T Consensus       184 a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~davVEVpc~v~~~Gi~P~~v~~~lP~~~~~gl~~~  249 (308)
T d1obba2         184 HIPFIDALLNDNKA---RFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKIEPPLPDRVVKYYLRP  249 (308)
T ss_dssp             HHHHHHHHHHCCCE---EEEEEEECTTSSTTSCTTSEEEEEEEEETTEEEECCCSSCCCHHHHHHTHHH
T ss_pred             HHHHHHHHHcCCCe---EEEEECCCCCcCCCCCccceEEEEEEEeCCceeeeecCCCCChHHHHHHHHH
Confidence            78999999999763   44444 577875   88999999999999999997632488987654 4444

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.83  E-value=0.0013  Score=57.21  Aligned_cols=153  Identities=16%  Similarity=0.184  Sum_probs=85.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCch---h---hhhCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL---E---NALTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~---~---~al~~ADiV  113 (353)
                      +++.|+||++-+|..++..|++.|.  +|++.|+++  +.....++....   .+.  ..-+|.   +   +.+..-|++
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~~---~~~--~Dv~~~~~v~~~~~~~g~iDil   78 (242)
T d1cyda_           6 LRALVTGAGKGIGRDTVKALHASGA--KVVAVTRTNSDLVSLAKECPGIE---PVC--VDLGDWDATEKALGGIGPVDLL   78 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHSTTCE---EEE--CCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHhcCCCe---EEE--EeCCCHHHHHHHHHHcCCCeEE
Confidence            4788999999999999999999998  999999876  222233332211   111  011221   1   224678999


Q ss_pred             EEcCCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          114 IIPAGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       114 Ii~ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      |..||.....   ..+   ....+..|+..    .+...+.+.+....+.+|+++......            +.|..-.
T Consensus        79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~------------~~~~~~~  146 (242)
T d1cyda_          79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV------------TFPNLIT  146 (242)
T ss_dssp             EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------CCTTBHH
T ss_pred             EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccc------------cCCcccc
Confidence            9999865321   122   23344555544    444555554445566777765432111            1222222


Q ss_pred             EeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          184 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ++.+.-.-..+-+.+|..++  +..|++-.+-
T Consensus       147 Y~asKaal~~lt~~lA~e~~--~~gIrvN~I~  176 (242)
T d1cyda_         147 YSSTKGAMTMLTKAMAMELG--PHKIRVNSVN  176 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             ccchHHHHHHHHHHHHHHhC--ccCeecccCC
Confidence            33333333456777888774  5556555444

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.79  E-value=0.0099  Score=51.87  Aligned_cols=157  Identities=17%  Similarity=0.125  Sum_probs=86.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|+++  ++....++........+..+. .-+|.          .+.+.
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           5 RVVLITGGGSGLGRATAVRLAAEGA--KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            4678889999999999999999998  999999976  333333343222122222221 11222          12346


Q ss_pred             CCcEEEEcCCCCCCC----CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRKP----GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~----g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .-|++|..||.....    ..+   ....+..|+..    .+...+.+++. ..+.||+++......            +
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~------------~  149 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ-GSGMVVNTASVGGIR------------G  149 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCCEEEEECCGGGTS------------B
T ss_pred             CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhh-cCCCCcccccHhhcc------------C
Confidence            799999999854222    123   23345556544    44444555544 355666665322111            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+.-....+-+.+|..++  +..|++-.+-
T Consensus       150 ~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~i~  185 (258)
T d1iy8a_         150 IGNQSGYAAAKHGVVGLTRNSAVEYG--RYGIRINAIA  185 (258)
T ss_dssp             CSSBHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhC--ccCceEEEEe
Confidence            22222233333333456677888774  5566555554

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.78  E-value=0.00058  Score=55.55  Aligned_cols=70  Identities=17%  Similarity=0.107  Sum_probs=47.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC---CchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ---PQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t---~d~~~al~~ADiVIi~a  117 (353)
                      +||.|+|| |.+|+++|..|...|+  +|+++|++..  .+.++..... .........   ...++.+...|+++.+.
T Consensus         3 K~IliiGa-G~~G~~~a~~L~~~g~--~V~v~dr~~~--~a~~l~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~i~~~   75 (182)
T d1e5qa1           3 KSVLMLGS-GFVTRPTLDVLTDSGI--KVTVACRTLE--SAKKLSAGVQ-HSTPISLDVNDDAALDAEVAKHDLVISLI   75 (182)
T ss_dssp             CEEEEECC-STTHHHHHHHHHTTTC--EEEEEESCHH--HHHHHHTTCT-TEEEEECCTTCHHHHHHHHTTSSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCC--EEEEEECChH--HHHHHHhccc-ccccccccccchhhhHhhhhccceeEeec
Confidence            49999999 9999999999999998  9999999762  3334443221 111111111   23345678899888764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.74  E-value=0.011  Score=51.47  Aligned_cols=152  Identities=14%  Similarity=0.167  Sum_probs=87.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---h-------hhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~al~  108 (353)
                      +++.|+||++-+|..++..|++.|.  +|++.|++.  ++..+.++..     ....+. .-+|.   +       +.+.
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~-----~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           6 KTALITGSARGIGRAFAEAYVREGA--RVAIADINLEAARATAAEIGP-----AACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             EEEEEETCSSHHHHHHHHHHHHTTE--EEEEEESCHHHHHHHHHHHCT-----TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCC-----ceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            4678889999999999999999997  999999876  3444444422     111111 11221   1       2235


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      .-|++|..+|.....   ..+   ....+..|+.    ..+.+++.+.+....+.||+++......            +.
T Consensus        79 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~------------~~  146 (256)
T d1k2wa_          79 SIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRR------------GE  146 (256)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS------------CC
T ss_pred             CccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcc------------cc
Confidence            789999999865321   122   3344556653    4455566666555567777776432111            12


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      |..-.++.+.-.-..|-+.+|..++  +..|++-.+
T Consensus       147 ~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~V  180 (256)
T d1k2wa_         147 ALVGVYCATKAAVISLTQSAGLNLI--RHGINVNAI  180 (256)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             ccccchhhhhhHHHHHHHHHHHHhc--ccCeEEEEE
Confidence            2222233333333456677888774  455544433

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.72  E-value=0.0034  Score=50.10  Aligned_cols=79  Identities=18%  Similarity=0.264  Sum_probs=54.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .+||+|||+.|.+|..++..|.+.|+  +|.++|++...                      ..+....++|+++......
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~--~V~~~d~~~~~----------------------~~~~~~~~~~~v~~~~~~~   64 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGY--PISILDREDWA----------------------VAESILANADVVIVSVPIN   64 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTC--CEEEECTTCGG----------------------GHHHHHTTCSEEEECSCGG
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCC--CcEeccccccc----------------------ccchhhhhccccccccchh
Confidence            45999999449999999999999999  99999986511                      1235568899988874211


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                                      .+.++...+..+. ++++++-.+.
T Consensus        65 ----------------~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          65 ----------------LTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             ----------------GHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             ----------------hheeeeecccccccCCceEEEecc
Confidence                            1334444555554 5666665553

>d1vjta2 d.162.1.2 (A:192-469) Putative alpha-glucosidase TM0752 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: LDH C-terminal domain-like
superfamily: LDH C-terminal domain-like
family: AglA-like glucosidase
domain: Putative alpha-glucosidase TM0752
species: Thermotoga maritima [TaxId: 2336]

Probab=96.63  E-value=0.0047  Score=54.82  Aligned_cols=55  Identities=11%  Similarity=-0.050  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHhccCCCCeEEEee-eeeCCC---CCccEEEEEEEEcCCceEEEccCCCCCH
Q 018618          270 YAAVKFADACLRGLRGDAGVVECA-FVASQV---TELPFFASKVRLGRQGAEEIFQLGPLNE  327 (353)
Q Consensus       270 ~a~~~li~ai~~~~~~~~~v~~~~-~~~g~~---~~~~~~s~Pv~ig~~Gv~~v~~~~~L~~  327 (353)
                      ..++++|+||.+|++.   ++.+. -++|.+   |++.++.+||+|+++|+.++...+.++.
T Consensus       153 e~a~~ii~ai~~~~~~---~~~vNv~N~G~I~nLp~davVEVpc~Vd~~Gi~P~~vg~~~p~  211 (278)
T d1vjta2         153 EQHIPFINAIANNKRV---RLFLNVENQGTLKDFPDDVVMELPVWVDCCGIHREKVEPDLTH  211 (278)
T ss_dssp             CSHHHHHHHHHHCCCE---EEEEEEECTTSSTTSCSSSEEEEEEEEETTEEEECCCCSCCCH
T ss_pred             HHHHHHHHHHhCCCCe---EEEEECCCCCcCCCCCchhheEeEEEEeCCceeeeecCCCChH
Confidence            4567999999999763   44444 578876   8899999999999999999765323443

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.61  E-value=0.017  Score=50.48  Aligned_cols=156  Identities=14%  Similarity=0.125  Sum_probs=89.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---hh-------hhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---LE-------NAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~~-------~al  107 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|++.   ++..+.++....  ..+..+. .-+|   .+       +.+
T Consensus         8 K~alITGas~GIG~aia~~la~~G~--~Vv~~~r~~~~~~~~~~~~~~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           8 KVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKVG--GEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3677789999999999999999998  999999875   233344454332  2222221 1122   11       223


Q ss_pred             CCCcEEEEcCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..-|++|..+|.....   ..+.   ...+..|+    ...+..++.+.+......|+++|......            +
T Consensus        84 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~------------~  151 (261)
T d1geea_          84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI------------P  151 (261)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS------------C
T ss_pred             CCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcc------------c
Confidence            5789999999865322   1232   33445554    45566677776665566666665432211            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+.-....+-+.+|..++  +..|++-.+-
T Consensus       152 ~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIrVN~I~  187 (261)
T d1geea_         152 WPLFVHYAASKGGMKLMTETLALEYA--PKGIRVNNIG  187 (261)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEE
T ss_pred             CccccccccCCccchhhHHHHHHHhh--hhCcEEEEEe
Confidence            22222234433334456777888874  5556555553

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.60  E-value=0.0039  Score=51.81  Aligned_cols=86  Identities=20%  Similarity=0.159  Sum_probs=55.8

Q ss_pred             hhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCC------CeEEE--------
Q 018618           32 KCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTG------AVVRG--------   96 (353)
Q Consensus        32 ~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~------~~v~~--------   96 (353)
                      .-+..++.+|-||.|+|| |.+|.+-+...+..|-  .+..+|.+. ......++......      .....        
T Consensus        20 l~~~~g~V~pa~VvViGa-GvaG~~Aa~~A~~lGA--~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~   96 (183)
T d1l7da1          20 MMTAAGTVPPARVLVFGV-GVAGLQAIATAKRLGA--VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEM   96 (183)
T ss_dssp             EEETTEEECCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCSTTHHHHHHTTCEECCC------------------
T ss_pred             cccccCCcCCcEEEEEcC-cHHHHHHHHHHHHcCC--EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhc
Confidence            567788899999999999 9999998877776665  999999987 33333333210000      00000        


Q ss_pred             ---Ee--CCCchhhhhCCCcEEEEcCCCC
Q 018618           97 ---FL--GQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        97 ---~~--~t~d~~~al~~ADiVIi~ag~~  120 (353)
                         +.  ....+.+.+++||+||.++-.|
T Consensus        97 s~~~~~~~~~~l~~~l~~aDlVI~talip  125 (183)
T d1l7da1          97 GEEFRKKQAEAVLKELVKTDIAITTALIP  125 (183)
T ss_dssp             -----CCHHHHHHHHHTTCSEEEECCCCT
T ss_pred             CHHHHHHHHHHHHHHHHhhhhheeeeecC
Confidence               00  0012345689999999998665

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.55  E-value=0.019  Score=49.76  Aligned_cols=153  Identities=16%  Similarity=0.216  Sum_probs=88.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALTG  109 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~~  109 (353)
                      .+.|+||++-+|..++..|++.|.  +|+++|+++  ++..+.++....  ..+..+. .-+|.          .+.+..
T Consensus        12 valITGas~GIG~a~a~~la~~Ga--~V~~~~r~~~~l~~~~~~l~~~g--~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1          12 VALVTGAGRGIGREIAKMLAKSVS--HVICISRTQKSCDSVVDEIKSFG--YESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTTSS--EEEEEESSHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            455779999999999999999998  999999976  444455565432  2222221 11222          133468


Q ss_pred             CcEEEEcCCCCCCC---CCC---HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          110 MDLVIIPAGVPRKP---GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       110 ADiVIi~ag~~~~~---g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      -|++|..+|.....   ..+   ....+..|+    ...+..++.+.+. ..+.||++|....          ..  +.|
T Consensus        88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~----------~~--~~~  154 (251)
T d2c07a1          88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINN-RYGRIINISSIVG----------LT--GNV  154 (251)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHH-TCEEEEEECCTHH----------HH--CCT
T ss_pred             ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccC-CCeEEEEECCHHh----------cC--CCC
Confidence            99999998864322   122   233445554    4445555666654 4567777664221          11  233


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ..-.++.+.-.-..|-+.+|..++  +..|++-.+
T Consensus       155 ~~~~Y~asKaal~~ltr~lA~el~--~~gIrVN~V  187 (251)
T d2c07a1         155 GQANYSSSKAGVIGFTKSLAKELA--SRNITVNAI  187 (251)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhh--hhCeEEEEE
Confidence            333344444344457778888774  455554444

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.53  E-value=0.026  Score=48.98  Aligned_cols=155  Identities=14%  Similarity=0.144  Sum_probs=87.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      +.+.|+||++-+|..+|..|++.|.  +|++.|+++  ++..+.++....  ..+..+. .-+|.          .+.+.
T Consensus        12 K~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~l~~~g--~~~~~~~~Dvs~~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_          12 KCAIITGAGAGIGKEIAITFATAGA--SVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKLG   87 (255)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4677889999999999999999998  999999876  344444555432  2222221 11222          23346


Q ss_pred             CCcEEEEcCCCCCCC--CCCHH---HHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCC
Q 018618          109 GMDLVIIPAGVPRKP--GMTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYD  179 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~--g~~r~---~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~  179 (353)
                      .-|++|..+|.....  ..+..   ..+..|+    ...+.+++.+.+.. .+.+|+++.-...            .+.|
T Consensus        88 ~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~------------~~~~  154 (255)
T d1fmca_          88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAE------------NKNI  154 (255)
T ss_dssp             SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGT------------CCCT
T ss_pred             CCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchh------------cccc
Confidence            899999998864321  23332   3345554    34555566666554 4455555432111            1122


Q ss_pred             CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          180 PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       180 ~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ..-.++.+.-....+-+.+|..++  +..|++-.+-
T Consensus       155 ~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~I~  188 (255)
T d1fmca_         155 NMTSYASSKAAASHLVRNMAFDLG--EKNIRVNGIA  188 (255)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEEE
T ss_pred             ccccchhHHHHHHHHHHHHHHHhC--ccCeEEEEee
Confidence            222334433334456777888774  5556554443

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.53  E-value=0.0033  Score=54.71  Aligned_cols=151  Identities=17%  Similarity=0.193  Sum_probs=85.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~----------~~al~  108 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++....     ..+ ..-+|.          .+.+.
T Consensus         7 K~alITGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           7 KVALVSGGARGMGASHVRAMVAEGA--KVVFGDILDEEGKAMAAELADAA-----RYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTGGGE-----EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhCcc-----eEEEeecCCHHHHHHHHHHHHHHhC
Confidence            4677889999999999999999998  999999976  333444443211     111 011121          23346


Q ss_pred             CCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKP---GMT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      .-|++|..+|.....   ..+   ..+.+..|+...    +...+.+.+. +.+.||+++......            +.
T Consensus        80 ~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~------------~~  146 (244)
T d1nffa_          80 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEA-GRGSIINISSIEGLA------------GT  146 (244)
T ss_dssp             CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------CC
T ss_pred             CCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhc-CcceEEecccccccc------------cc
Confidence            789999999864321   223   333455565444    4444555544 456777776533211            12


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      |..-.++.+.-.-..|-+.+|..++  +..|++-.+
T Consensus       147 ~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I  180 (244)
T d1nffa_         147 VACHGYTATKFAVRGLTKSTALELG--PSGIRVNSI  180 (244)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             ccccchhhHHHHHHHHHHHHHHHhc--ccCEEEEEE
Confidence            2222233333334456677777774  455544444

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.52  E-value=0.002  Score=55.64  Aligned_cols=109  Identities=16%  Similarity=0.166  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCC---chhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQP---QLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~---d~~~al~~ADiVIi~  116 (353)
                      +.+++.|+||++-+|..++..|++.|.  +|++.|+++.  .   +.+..  .......-+.   ...+.+..-|++|..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga--~V~~~~r~~~--~---l~~~~--~~~~~~Dv~~~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA--EVTICARNEE--L---LKRSG--HRYVVCDLRKDLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHH--H---HHHTC--SEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHH--H---HHhcC--CcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence            456899999999999999999999998  9999998751  1   11111  1111100011   234567889999999


Q ss_pred             CCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHhhCCCcEEEEec
Q 018618          117 AGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       117 ag~~~~~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ||.+...   ..+.   ...+..|+.    ..+.+.+.+++. +.+.+|+++
T Consensus        74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~G~ii~i~  124 (234)
T d1o5ia_          74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK-GWGRIVAIT  124 (234)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEC
T ss_pred             ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccc-ccccccccc
Confidence            9876432   1232   233445544    455666666654 345555554

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.52  E-value=0.0064  Score=53.32  Aligned_cols=155  Identities=18%  Similarity=0.204  Sum_probs=86.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---hh-------hhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---LE-------NALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~~-------~al~  108 (353)
                      +.+.|+||++-+|..+|..|++.|.  +|++.|+++  ++..+.++....   .+..+. .-+|   .+       +.+.
T Consensus         7 KvalITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~l~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           7 KVAIITGGAGGIGETTAKLFVRYGA--KVVIADIADDHGQKVCNNIGSPD---VISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHCCTT---TEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhcCCC---ceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678889999999999999999998  999999976  344444554321   122211 1122   22       2345


Q ss_pred             CCcEEEEcCCCCC-CC----CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          109 GMDLVIIPAGVPR-KP----GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       109 ~ADiVIi~ag~~~-~~----g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      ..|++|..+|... .+    ..+   ....+..|+.    ..+..++.+.+. ..+.+|+++.-....           .
T Consensus        82 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~g~ii~iss~~~~~-----------~  149 (268)
T d2bgka1          82 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPA-KKGSIVFTASISSFT-----------A  149 (268)
T ss_dssp             CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGG-TCEEEEEECCGGGTC-----------C
T ss_pred             CcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhc-CCCCccccccccccc-----------c
Confidence            7899999988532 21    222   2233455554    445555555544 345556555432211           1


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +.+..-.++.+.-....+-+.+|..++  +..|++-.+-
T Consensus       150 ~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~I~  186 (268)
T d2bgka1         150 GEGVSHVYTATKHAVLGLTTSLCTELG--EYGIRVNCVS  186 (268)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             ccccccccchhHHHHHhCHHHHHHHhC--hhCeEEEecC
Confidence            111111334433334556777888775  4556544443

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.49  E-value=0.02  Score=49.65  Aligned_cols=113  Identities=13%  Similarity=0.162  Sum_probs=66.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---h-------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~-------~~al~  108 (353)
                      +.+.|+||++-+|..+|..|++.|.  +|++.|+++  +...+.++.+.. ..++..+. .-+|   .       .+.+.
T Consensus         6 K~~lITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           6 RVALVTGGSRGLGFGIAQGLAEAGC--SVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4788999999999999999999998  999999876  333334443221 12222211 1112   1       12345


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEec
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      .-|++|..||......   .+   ....+..|+.    ..+..++.+++.. .+.+|+++
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~  141 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIG  141 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEEC
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccc
Confidence            7999999998653221   23   2334555654    4455555555433 44555554

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.48  E-value=0.022  Score=49.42  Aligned_cols=156  Identities=13%  Similarity=0.093  Sum_probs=86.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc---h-------hhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d---~-------~~al  107 (353)
                      +.+.|+||++-+|..+|..|++.|.  +|++.|+++   ++....++.... ...+..+. .-+|   .       .+.+
T Consensus         5 K~alITGas~GIG~aiA~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           5 KVAVVTGSTSGIGLGIATALAAQGA--DIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            3667789989999999999999998  999999876   222233332211 11222111 0111   1       2234


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      -.-|++|..||......   .+   ....+..|+    ...+...+.+++.. .+.||+++......            +
T Consensus        82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~------------~  148 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV------------A  148 (260)
T ss_dssp             SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS------------C
T ss_pred             CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeeccccccee------------c
Confidence            57899999998653221   22   233445554    44556666666543 56676665433211            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+.-....+-+.+|..++  +..|++-.+-
T Consensus       149 ~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~I~  184 (260)
T d1x1ta1         149 SANKSAYVAAKHGVVGFTKVTALETA--GQGITANAIC  184 (260)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEEE
T ss_pred             cCCcchhhhhhhhHHHhHHHHHHHhc--hhCcEEEEEe
Confidence            22222233333334456778888875  5566544443

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=96.47  E-value=0.014  Score=50.93  Aligned_cols=155  Identities=13%  Similarity=0.135  Sum_probs=89.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~----------~~al~  108 (353)
                      +.+.|+||++-+|..++..|+..|.  +|++.|+++  ++..+.++....  .++..+.. -+|.          .+.+.
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           6 KVCLVTGAGGNIGLATALRLAEEGT--AIALLDMNREALEKAEASVREKG--VEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTT--SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678889999999999999999998  999999976  344445555432  22222211 1221          23346


Q ss_pred             CCcEEEEcCCCCCCCC----CC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRKPG----MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g----~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .-|++|..+|.....+    .+   ....+..|+..    .+...+.+.+. ..+.||+++....           . .+
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~-----------~-~~  148 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQ-NYGRIVNTASMAG-----------V-KG  148 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHH-----------H-SC
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhh-cCCCCCeeechhh-----------c-cC
Confidence            8999999988643221    23   23344555543    44455555543 4567777654211           1 12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+.-....|-+.+|..++  +..|++-.+-
T Consensus       149 ~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I~  184 (260)
T d1zema1         149 PPNMAAYGTSKGAIIALTETAALDLA--PYNIRVNAIS  184 (260)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHhh--hhCCEEEEec
Confidence            22222344443334457788888874  5556555443

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.47  E-value=0.013  Score=50.87  Aligned_cols=154  Identities=15%  Similarity=0.116  Sum_probs=89.0

Q ss_pred             eE-EEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCch----------hhhhC
Q 018618           43 KV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQL----------ENALT  108 (353)
Q Consensus        43 KI-~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~----------~~al~  108 (353)
                      || .|+||++-+|..+|..|++.|.  +|++.|+++  ++..+.++....  ..+..+.. -+|.          .+.+.
T Consensus         3 KValITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~l~~~~~~l~~~g--~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGL--RVFVCARGEEGLRTTLKELREAG--VEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            55 6779999999999999999998  999999976  344455555432  22222211 1221          12345


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhh-----CCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKC-----CPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~-----~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .-|++|..||......   .+   ..+.+..|+.....+++.+-.+     ...+.+++++.-...            .+
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~------------~~  146 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGK------------QG  146 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGT------------SC
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccc------------cc
Confidence            7899999998653221   22   3445677777777776665432     123556655432211            11


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .|..-.++.+.-....|-+.+|..++  +..|++-.+
T Consensus       147 ~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I  181 (257)
T d2rhca1         147 VVHAAPYSASKHGVVGFTKALGLELA--RTGITVNAV  181 (257)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHTT--TSEEEEEEE
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhh--hhCcEEEEE
Confidence            22222233333334456788888874  555655444

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.45  E-value=0.016  Score=43.81  Aligned_cols=68  Identities=19%  Similarity=0.158  Sum_probs=47.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .||.|+|+ |.+|...+..|...|.  ++.+++........ .+.+.   ..++......+ ++.+.++++|+.+.
T Consensus        13 k~vlVvG~-G~va~~ka~~ll~~ga--~v~v~~~~~~~~~~-~~~~~---~~i~~~~~~~~-~~dl~~~~lv~~at   80 (113)
T d1pjqa1          13 RDCLIVGG-GDVAERKARLLLEAGA--RLTVNALTFIPQFT-VWANE---GMLTLVEGPFD-ETLLDSCWLAIAAT   80 (113)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTB--EEEEEESSCCHHHH-HHHTT---TSCEEEESSCC-GGGGTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCC--eEEEEeccCChHHH-HHHhc---CCceeeccCCC-HHHhCCCcEEeecC
Confidence            49999999 9999999999999987  89999986643332 23332   22232222223 46789999999874

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.45  E-value=0.00094  Score=55.56  Aligned_cols=72  Identities=18%  Similarity=0.241  Sum_probs=45.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ++||+|+||+|++|.-+...|...+.+ ||..+=.+...|...+-.+...  ...+.    ..+.++..+++|+|+.+.
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~-ei~~l~s~~~aG~~i~~~~p~~~~~~~~~----~~~~~~~~~~~dvvf~a~   74 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEA-KITYLSSRTYAGKKLEEIFPSTLENSILS----EFDPEKVSKNCDVLFTAL   74 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTE-EEEEEECSTTTTSBHHHHCGGGCCCCBCB----CCCHHHHHHHCSEEEECC
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCc-eEEEeeccccCCCcccccCchhhcccccc----ccCHhHhccccceEEEcc
Confidence            579999999999999999999887765 6666644332232221111111  11222    234555567899999874

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.025  Score=48.97  Aligned_cols=114  Identities=16%  Similarity=0.109  Sum_probs=71.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCchh----------hhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQLE----------NALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~~----------~al~  108 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|++.  +.....++........+..+. .-+|.+          +.+-
T Consensus         4 KvalITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           4 KVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4678889999999999999999998  999999986  333444554332122333221 112221          2345


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHH----HHHHHHHHHHHhhC--CCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINA----GIVRTLCEGIAKCC--PNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~----~i~~~i~~~i~~~~--p~a~viv~tN  159 (353)
                      .-|++|..||....  .+..+.+..|+    ...+..++.+.+..  ..+.|++++.
T Consensus        82 ~iDilVnnAg~~~~--~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS  136 (254)
T d2gdza1          82 RLDILVNNAGVNNE--KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS  136 (254)
T ss_dssp             CCCEEEECCCCCCS--SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred             CcCeeccccccccc--ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeecc
Confidence            78999999986532  34455555555    45555666665543  3466777764

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.39  E-value=0.054  Score=46.56  Aligned_cols=155  Identities=17%  Similarity=0.193  Sum_probs=86.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL----------ENALTGM  110 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~~A  110 (353)
                      +.+.|+||++-+|..++..|+..|.  +|++.|+++.+.....+....  .++..+. .-+|.          .+.+..-
T Consensus         6 KvalVTGas~GIG~aia~~la~~Ga--~V~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           6 KLAVITGGANGIGRAIAERFAVEGA--DIAIADLVPAPEAEAAIRNLG--RRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCchHHHHHHHHHcC--CcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            4677889999999999999999998  999999987332222233322  2222221 11222          1224579


Q ss_pred             cEEEEcCCCCCCC---CCC---HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          111 DLVIIPAGVPRKP---GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       111 DiVIi~ag~~~~~---g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      |++|..+|.....   ..+   ....+..|+    ...+.+.+.+++.. .+.||++|.-...            .+.|.
T Consensus        82 DilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~------------~~~~~  148 (247)
T d2ew8a1          82 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYW------------LKIEA  148 (247)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG------------SCCSS
T ss_pred             CEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhc------------ccCcc
Confidence            9999999864321   122   233445554    44555555666553 5666666532211            11222


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .-.++.+.-.-..|-+.+|..++  +..|++-.+-
T Consensus       149 ~~~Y~asKaal~~ltk~lA~ela--~~gIrVN~I~  181 (247)
T d2ew8a1         149 YTHYISTKAANIGFTRALASDLG--KDGITVNAIA  181 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             cccchhhhccHHHHHHHHHHHhc--ccCeEEEEEe
Confidence            22233333333456677787773  5556554443

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=96.39  E-value=0.029  Score=48.69  Aligned_cols=155  Identities=13%  Similarity=0.076  Sum_probs=86.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---h-------hhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NAL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~al  107 (353)
                      .+.+.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++....  .....+. .-+|.   +       +.+
T Consensus         8 GK~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           8 GCTALVTGGSRGIGYGIVEELASLGA--SVYTCSRNQKELNDCLTQWRSKG--FKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            34678889999999999999999998  999999976  334444454332  2222221 11221   1       223


Q ss_pred             C-CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHH----HHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          108 T-GMDLVIIPAGVPRKPG---MT---RDDLFNINAGIV----RTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       108 ~-~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~----~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      . .-|++|..+|......   .+   ....+..|+...    +...+.+.+. +.+.||+++.-....            
T Consensus        84 ~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~------------  150 (259)
T d2ae2a_          84 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKAS-ERGNVVFISSVSGAL------------  150 (259)
T ss_dssp             TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-SSEEEEEECCGGGTS------------
T ss_pred             CCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhh-ccccccccccccccc------------
Confidence            3 4799999998653221   22   333455665444    4444444433 456666665422211            


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +.|..-.++.+.-.-..|-+.+|..++  +..|++-.+
T Consensus       151 ~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~I  186 (259)
T d2ae2a_         151 AVPYEAVYGATKGAMDQLTRCLAFEWA--KDNIRVNGV  186 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             ccccccchHHHHHHHHHHHHHHHHHhC--cCceEEEEe
Confidence            122222233333333456777888774  455554444

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=96.35  E-value=0.0029  Score=51.50  Aligned_cols=106  Identities=20%  Similarity=0.235  Sum_probs=64.8

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      -...||.|||+ |.+|..++..|...|. .++.++.++..++.  ++.... +.....   -+++.+++.++|+||.+.+
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~-~~i~v~nRt~~ka~--~l~~~~-~~~~~~---~~~~~~~l~~~Divi~ats   93 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGV-RAVLVANRTYERAV--ELARDL-GGEAVR---FDELVDHLARSDVVVSATA   93 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCC-SEEEEECSSHHHHH--HHHHHH-TCEECC---GGGHHHHHHTCSEEEECCS
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCC-cEEEEEcCcHHHHH--HHHHhh-hccccc---chhHHHHhccCCEEEEecC
Confidence            35569999999 9999999999988775 47899998642222  222110 111111   1467889999999999876


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhh--CCCcEEEEecCCCCch
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKC--CPNATVNLISNPVNST  164 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~--~p~a~viv~tNPv~~~  164 (353)
                      .+.. =.+..        .++   ..+.+-  ....+++=.+.|-|+-
T Consensus        94 s~~~-ii~~~--------~i~---~~~~~r~~~~~~~iiDlavPr~vd  129 (159)
T d1gpja2          94 APHP-VIHVD--------DVR---EALRKRDRRSPILIIDIANPRDVE  129 (159)
T ss_dssp             SSSC-CBCHH--------HHH---HHHHHCSSCCCEEEEECCSSCSBC
T ss_pred             CCCc-cccHh--------hhH---HHHHhcccCCCeEEEeecCCCCcC
Confidence            5421 11211        111   222222  2344777789997655

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0013  Score=57.44  Aligned_cols=155  Identities=16%  Similarity=0.153  Sum_probs=85.6

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC-----CchhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ-----PQLENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t-----~d~~~al~~ADiVIi~  116 (353)
                      +.+.|+||++.+|..++..|+..|.  +|++.|+++.  ...++.+.. ..........     +...+.+..-|++|..
T Consensus         7 K~alITGas~GIG~aia~~la~~G~--~Vi~~~r~~~--~l~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~   81 (245)
T d2ag5a1           7 KVIILTAAAQGIGQAAALAFAREGA--KVIATDINES--KLQELEKYP-GIQTRVLDVTKKKQIDQFANEVERLDVLFNV   81 (245)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHH--HHGGGGGST-TEEEEECCTTCHHHHHHHHHHCSCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCHH--HHHHHHhcc-CCceeeeeccccccccccccccccceeEEec
Confidence            3677789999999999999999998  9999998751  111222211 1111111000     1122345689999999


Q ss_pred             CCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          117 AGVPRKP---GMTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       117 ag~~~~~---g~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      +|.....   ..+.   ...+..|+    ...+.+.+.+.+. +.+.+++++......           .+++..-.++.
T Consensus        82 ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~g~Ii~isS~~~~~-----------~~~~~~~~Y~~  149 (245)
T d2ag5a1          82 AGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQ-KSGNIINMSSVASSV-----------KGVVNRCVYST  149 (245)
T ss_dssp             CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCSBTTT-----------BCCTTBHHHHH
T ss_pred             ccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccC-CCceeeeeechhhcc-----------CCccchhHHHH
Confidence            8865432   1232   23344454    3444555555443 466677776543321           11222223444


Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +.-.-..+-+.+|+.++  +..|++-.+-
T Consensus       150 sKaal~~l~r~lA~e~~--~~gIrvN~I~  176 (245)
T d2ag5a1         150 TKAAVIGLTKSVAADFI--QQGIRCNCVC  176 (245)
T ss_dssp             HHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhh--hhCcEEEEEe
Confidence            33334457788888875  4556554443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.32  E-value=0.025  Score=49.46  Aligned_cols=156  Identities=14%  Similarity=0.119  Sum_probs=87.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC-CCeEEEEeC-CCch----------hhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT-GAVVRGFLG-QPQL----------ENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~-~~~v~~~~~-t~d~----------~~al  107 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++..... ...+..+.. -+|.          .+.+
T Consensus         6 K~alVTGas~GIG~aia~~la~~Ga--~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           6 KTVIITGSSNGIGRTTAILFAQEGA--NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4677889999999999999999998  999999986  4444555655432 123333211 1221          1233


Q ss_pred             CCCcEEEEcCCCCCCC--C-----CC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHH
Q 018618          108 TGMDLVIIPAGVPRKP--G-----MT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  173 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~--g-----~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~  173 (353)
                      ..-|++|..+|.....  .     ++   ....+..|+.    ..+...+.+++. +..+|++.|......         
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~---------  153 (272)
T d1xkqa_          84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQ---------  153 (272)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSS---------
T ss_pred             CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccchhcccc---------
Confidence            5789999998865321  1     12   2233455654    445555555543 455555544211111         


Q ss_pred             HhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          174 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       174 ~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                         +.|..-.++.+.-....|-+.+|..++  +..|++-.+
T Consensus       154 ---~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I  189 (272)
T d1xkqa_         154 ---AQPDFLYYAIAKAALDQYTRSTAIDLA--KFGIRVNSV  189 (272)
T ss_dssp             ---CCCSSHHHHHHHHHHHHHHHHHHHHHH--TTTCEEEEE
T ss_pred             ---CCCCcchhhhHHHHHHHHHHHHHHHhc--ccCeEEEEE
Confidence               122222233333334456777887774  455654444

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=96.32  E-value=0.0021  Score=55.84  Aligned_cols=152  Identities=14%  Similarity=0.210  Sum_probs=87.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      +.+.|+||++-+|..++..|++.|.  .|++.|+++  ++..+.++...     ...+. .-+|.          .+.+.
T Consensus         5 K~alITGas~GIG~a~a~~l~~~G~--~Vv~~~r~~~~l~~~~~~~~~~-----~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           5 KIALVTGASRGIGRAIAETLAARGA--KVIGTATSENGAQAISDYLGAN-----GKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHGGG-----EEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHhCCC-----CcEEEEEecCHHHhhhhhhhhhcccC
Confidence            3567779999999999999999998  999999876  33334444321     11110 11121          12345


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      .-|++|..||......   .+   ....+..|+    ...+...+.+.+. ..+.||++|....          ..  +.
T Consensus        78 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~II~isS~~~----------~~--~~  144 (243)
T d1q7ba_          78 EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKK-RHGRIITIGSVVG----------TM--GN  144 (243)
T ss_dssp             SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCHHH----------HH--CC
T ss_pred             CcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHc-CCCEeeeecchhh----------cC--CC
Confidence            7999999988653221   22   233445554    4455555555554 3577777764211          11  23


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      |..-.++.+.-.-..|-+.+|..++  +..|++-.+-
T Consensus       145 ~~~~~Y~asKaal~~lt~~lA~ela--~~gIrVN~I~  179 (243)
T d1q7ba_         145 GGQANYAAAKAGLIGFSKSLAREVA--SRGITVNVVA  179 (243)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhC--ccCeEEEEEe
Confidence            3233344444444567788888874  4556544443

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.29  E-value=0.00088  Score=53.81  Aligned_cols=71  Identities=21%  Similarity=0.336  Sum_probs=46.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +|||+|+||+|++|.-+...|.+.++ ..+|.++-.+...|...  ..  ....+....  .+ .+.+.++|+++++.+
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i--~~--~~~~~~~~~--~~-~~~~~~~d~vf~a~p   73 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM--GF--AESSLRVGD--VD-SFDFSSVGLAFFAAA   73 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE--EE--TTEEEECEE--GG-GCCGGGCSEEEECSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcce--ee--ccccchhcc--ch-hhhhccceEEEecCC
Confidence            68999999999999999998876542 45888887654222211  11  112333221  22 355789999998753

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.013  Score=51.23  Aligned_cols=113  Identities=15%  Similarity=0.168  Sum_probs=65.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc----------hhhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ----------LENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d----------~~~al~  108 (353)
                      +++.|+||++-+|.++|..|++.|.  +|++.|+++  ++....++.... ......+.. ..+          ..+.+.
T Consensus        15 K~alITGassGIG~aiA~~la~~G~--~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          15 KKVIVTGASKGIGREMAYHLAKMGA--HVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            4788999999999999999999998  999999986  333333333221 122222111 111          112345


Q ss_pred             CCcEEEEcCCCCCCC---CCCHH---HHHHHHH----HHHHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMTRD---DLFNINA----GIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r~---~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      ..|+++..+|.....   ..+..   ..+..|+    ...+.+.+.+++.  ++.+++++.
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS  150 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSS  150 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEE
T ss_pred             CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEecc
Confidence            788999887753211   12222   2344453    4555555666543  455565543

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=96.27  E-value=0.0061  Score=53.00  Aligned_cols=157  Identities=15%  Similarity=0.136  Sum_probs=85.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe----CCCchhhhhCCCcEEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL----GQPQLENALTGMDLVII  115 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~----~t~d~~~al~~ADiVIi  115 (353)
                      .+.+.|+||++-+|..++..|++.|.  +|++.|+++ ....+..+.......++....    .-....+.+..-|++|.
T Consensus         5 GK~alITGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn   82 (248)
T d2d1ya1           5 GKGVLVTGGARGIGRAIAQAFAREGA--LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN   82 (248)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence            34788999999999999999999998  999999987 222222222110001111000    00112234568999999


Q ss_pred             cCCCCCC-C--CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEe
Q 018618          116 PAGVPRK-P--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLG  185 (353)
Q Consensus       116 ~ag~~~~-~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG  185 (353)
                      .||.... +  ..+   ....+..|+.    ..+...+.+++. ..+.||+++......            +.|..-.++
T Consensus        83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~~G~Ii~isS~~~~~------------~~~~~~~Y~  149 (248)
T d2d1ya1          83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKV-GGGAIVNVASVQGLF------------AEQENAAYN  149 (248)
T ss_dssp             CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTT-TCEEEEEECCGGGTS------------BCTTBHHHH
T ss_pred             eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccc-ccccccccccccccc------------cccccchhH
Confidence            9886432 1  223   2234455554    445555555543 356777776433211            122222233


Q ss_pred             echhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          186 VTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       186 ~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+.-.-..+-+.+|+.++  +..|++-.+
T Consensus       150 asKaal~~ltk~lA~el~--~~gIrVN~I  176 (248)
T d2d1ya1         150 ASKGGLVNLTRSLALDLA--PLRIRVNAV  176 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHhh--hhCcEEEEE
Confidence            333333456778888875  455654444

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.038  Score=47.60  Aligned_cols=117  Identities=20%  Similarity=0.251  Sum_probs=72.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCchh----------hhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQLE----------NALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~~----------~al~  108 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++....  .++..+ ..-+|.+          +.+.
T Consensus         8 kv~lITGas~GIG~~ia~~la~~G~--~V~l~~r~~~~l~~~~~~~~~~~--~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           8 EIVLITGAGHGIGRLTAYEFAKLKS--KLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            3677779988999999999999998  999999987  444555555322  232222 1223332          2456


Q ss_pred             CCcEEEEcCCCCCCCCC--C----HHHHHHHH----HHHHHHHHHHHHhhCCCcEEEEecCCCCc
Q 018618          109 GMDLVIIPAGVPRKPGM--T----RDDLFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNS  163 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~--~----r~~~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNPv~~  163 (353)
                      .-|++|..+|.......  .    ..+.+..|    ....+.+.+.+.+. ..+.|++++.....
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~G~Iv~isS~~~~  147 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKN-NHGHIVTVASAAGH  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCC-C
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhc-CCceEEEeecchhc
Confidence            79999999886543221  1    22334444    34556666667654 45777777655543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.25  E-value=0.019  Score=49.88  Aligned_cols=79  Identities=15%  Similarity=0.101  Sum_probs=51.4

Q ss_pred             CCCeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCC---------Cchhhhh
Q 018618           40 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQ---------PQLENAL  107 (353)
Q Consensus        40 ~~~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t---------~d~~~al  107 (353)
                      +.+++.|+||+|  -+|.++|..|+..|.  +|++.|+++ +...+.++........+.....+         .+..+.+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga--~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            456899999876  499999999999998  999999987 44444444432211122111111         1123445


Q ss_pred             CCCcEEEEcCCCC
Q 018618          108 TGMDLVIIPAGVP  120 (353)
Q Consensus       108 ~~ADiVIi~ag~~  120 (353)
                      ...|++|..+|..
T Consensus        82 g~id~lV~nag~~   94 (274)
T d2pd4a1          82 GSLDFIVHSVAFA   94 (274)
T ss_dssp             SCEEEEEECCCCC
T ss_pred             CCCCeEEeecccc
Confidence            7889999988754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.25  E-value=0.028  Score=48.75  Aligned_cols=115  Identities=14%  Similarity=0.165  Sum_probs=69.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|+++  +...+.++.... ...+..+. .-+|.          .+.+.
T Consensus        10 K~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_          10 KTIIVTGGNRGIGLAFTRAVAAAGA--NVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678889999999999999999998  999999987  333333343211 11222211 11221          13345


Q ss_pred             CCcEEEEcCCCCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecC
Q 018618          109 GMDLVIIPAGVPRKP---GMTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~---g~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      .-|++|..+|.....   ..+.   ...+..|+.    ..+.+++.+.+....+.+++.+.
T Consensus        87 ~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s  147 (260)
T d1h5qa_          87 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSS  147 (260)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECC
T ss_pred             CCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeec
Confidence            799999998864321   1222   234455553    45556666666666666665543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.24  E-value=0.03  Score=48.98  Aligned_cols=156  Identities=15%  Similarity=0.156  Sum_probs=85.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeC-CCch---h-------hhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLG-QPQL---E-------NAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~-t~d~---~-------~al  107 (353)
                      +.+.|+||++-+|..+|..|++.|.  +|++.|+++  ++..+.++...... ..+..+.. -+|.   +       +.+
T Consensus         5 K~alITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           5 KSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4678889999999999999999998  999999986  44445556543321 23333221 1221   1       223


Q ss_pred             CCCcEEEEcCCCCCCCC-----CCH---HHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          108 TGMDLVIIPAGVPRKPG-----MTR---DDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g-----~~r---~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      ..-|++|..+|.....+     ++.   ...+..|+.    ..+...+.+.+ .+.+.+++.|.-...            
T Consensus        83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~-~~~g~ii~~ss~~~~------------  149 (274)
T d1xhla_          83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK-TKGEIVNVSSIVAGP------------  149 (274)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-TTCEEEEECCGGGSS------------
T ss_pred             CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccc-cccccccchhhhhcc------------
Confidence            47899999988543221     222   233445554    44455555543 345666655421110            


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .+.|..-.++.+.-....+-+.+|..++  +..|++-.+
T Consensus       150 ~~~~~~~~Y~asKaal~~ltk~lA~ela--~~gIrVN~I  186 (274)
T d1xhla_         150 QAHSGYPYYACAKAALDQYTRCTAIDLI--QHGVRVNSV  186 (274)
T ss_dssp             SCCTTSHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             ccCCCCceehhhhhHHHHHHHHHHHHHh--HhCCceeee
Confidence            0111111233332233456677887774  455554444

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.19  E-value=0.039  Score=48.45  Aligned_cols=156  Identities=13%  Similarity=0.029  Sum_probs=83.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCch----------hhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQL----------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~----------~~al~  108 (353)
                      +.+.|+||+|.+|.++|..|+..|.  +|++.|++.  +...+.++.... ......+ ..-+|.          .+.+.
T Consensus        26 K~alITGas~GIG~aiA~~la~~Ga--~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          26 KVAFITGGGTGLGKGMTTLLSSLGA--QCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            3677889999999999999999998  999999987  333444453221 1122221 111222          22346


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      ..|++|..+|......   .+   ..+.+..|...    ....+...........+++.+.....          .  +.
T Consensus       103 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~----------~--~~  170 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAE----------T--GS  170 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHH----------H--CC
T ss_pred             ccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhh----------h--cc
Confidence            7899999988643322   12   22233334333    23334444444445555554432210          1  12


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      +..-.++.+.-.-..+-+.+|..++  +..|++-.+
T Consensus       171 ~~~~~YsasKaal~~ltk~lA~ela--~~gIrVN~I  204 (294)
T d1w6ua_         171 GFVVPSASAKAGVEAMSKSLAAEWG--KYGMRFNVI  204 (294)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHh--HhCeEEEEE
Confidence            2112234433334456778888875  555544444

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.18  E-value=0.0087  Score=50.12  Aligned_cols=98  Identities=19%  Similarity=0.273  Sum_probs=62.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      ..++|+|+|. |.+|+.++..+..-|.  ++..+|............       +..   ..++++.++.||+|++....
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~~~~~~-------~~~---~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGF--NVLFYDPYLSDGVERALG-------LQR---VSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCTTHHHHHT-------CEE---CSSHHHHHHHCSEEEECCCC
T ss_pred             eCceEEEecc-ccccccceeeeecccc--ceeeccCcccccchhhhc-------ccc---ccchhhccccCCEEEEeecc
Confidence            3469999999 9999999999987776  999999865221111111       111   24678889999999997532


Q ss_pred             -CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          120 -PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       120 -~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                       +...++-.       .       +.+....|++++|+++  .=+|.-
T Consensus       115 t~~T~~li~-------~-------~~l~~mk~~a~lIN~sRG~ivde~  148 (193)
T d1mx3a1         115 NEHNHHLIN-------D-------FTVKQMRQGAFLVNTARGGLVDEK  148 (193)
T ss_dssp             CTTCTTSBS-------H-------HHHTTSCTTEEEEECSCTTSBCHH
T ss_pred             cccchhhhh-------H-------HHHhccCCCCeEEecCCceEEcHH
Confidence             22223211       1       1233345789999997  334433

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=96.16  E-value=0.054  Score=46.90  Aligned_cols=156  Identities=12%  Similarity=0.077  Sum_probs=85.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCchh----------hh
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQLE----------NA  106 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d~~----------~a  106 (353)
                      +.+++.|+||++.+|..++..|++.|.  +|++.|+++  ++..+.++....  ..+..+ ..-++.+          +.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~--~V~i~~r~~~~l~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA--RVYTCSRNEKELDECLEIWREKG--LNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CCceEEEeecCCHHHHHHHHHHHHHH
Confidence            345899999999999999999999998  999999987  333344444332  122221 1112221          22


Q ss_pred             h-CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          107 L-TGMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       107 l-~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                      + ..-|++|..+|.....   ..+   ....+..|+.    ..+.+.+.+.+. +.+.+++++-.....           
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-~~g~ii~isS~~~~~-----------  148 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKAS-QNGNVIFLSSIAGFS-----------  148 (258)
T ss_dssp             TTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TSEEEEEECCGGGTS-----------
T ss_pred             hCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccc-ccccccccccccccc-----------
Confidence            2 2478888888764321   122   2333444543    344455555544 455666655433211           


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                       +.|..-.++.+.-.-..+-+.+|+.++  +..|++-.+
T Consensus       149 -~~~~~~~Y~~sK~al~~lt~~lA~el~--~~gIrvN~I  184 (258)
T d1ae1a_         149 -ALPSVSLYSASKGAINQMTKSLACEWA--KDNIRVNSV  184 (258)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             -ccccchhHHHHHHHHHHHHHHHHHhcC--cCcEEEEEE
Confidence             222223333433333456678888875  454543333

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.15  E-value=0.064  Score=46.57  Aligned_cols=156  Identities=16%  Similarity=0.102  Sum_probs=88.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCc----------hhhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQ----------LENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d----------~~~al  107 (353)
                      +++.|+||++-+|..++..|+..|.  +|++.|.+.   ++..+.++....  ..+..+. .-+|          ..+.+
T Consensus        19 K~~lITGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          19 KVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCchHHHHHHHHHHHhhC--CceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            4788889999999999999999998  999999876   233333343322  2222211 1122          12345


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      ..-|++|..+|.....   ..+   ..+.+..|+.....+.+.+..+- .++.+++++.-....           ...+.
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~-----------~~~~~  163 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQA-----------KAVPK  163 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTC-----------SSCSS
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccc-----------ccccc
Confidence            6789999998765322   122   33455667666666666666544 455555554322111           11111


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .=.++.+.-.-..+-+.+|..++  +..|++-.+
T Consensus       164 ~~~Y~asKaal~~ltk~lA~e~~--~~gIrVN~I  195 (272)
T d1g0oa_         164 HAVYSGSKGAIETFARCMAIDMA--DKKITVNVV  195 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhc--hhCeEEEEE
Confidence            12234443333456788888875  455544433

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=96.14  E-value=0.0021  Score=56.18  Aligned_cols=115  Identities=12%  Similarity=0.128  Sum_probs=67.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCC--CCeEEEEeC----CCchhhhhCCCcEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDT--GAVVRGFLG----QPQLENALTGMDLV  113 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~--~~~v~~~~~----t~d~~~al~~ADiV  113 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++.....  ..++.....    -....+.+..-|++
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga--~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           7 KVALVTGGASGVGLEVVKLLLGEGA--KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            4677779989999999999999998  899999976  3334444432110  011100000    01112334678999


Q ss_pred             EEcCCCCCCC---CCC---HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          114 IIPAGVPRKP---GMT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       114 Ii~ag~~~~~---g~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      |..+|.....   ..+   ....+..|+    ...+...+.+++  ..+.||+++..
T Consensus        85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~--~~G~Iv~isS~  139 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE--TGGSIINMASV  139 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--TCEEEEEECCG
T ss_pred             EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh--cCCceecccch
Confidence            9999864321   222   233445554    445556666653  24777777643

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=96.12  E-value=0.002  Score=53.71  Aligned_cols=74  Identities=18%  Similarity=0.294  Sum_probs=45.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHH-HH-hcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTA-DI-SHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~-dl-~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +++||+|+||+|++|.-+..+|...+.+ ||..+-.+...|... +. .+... ......  .....+.+.++|+|+.+.
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~-ei~~l~S~~~aG~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~Dvvf~al   79 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQF-RIKVMTADRKAGEQFGSVFPHLIT-QDLPNL--VAVKDADFSNVDAVFCCL   79 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSE-EEEEEECSTTTTSCHHHHCGGGTT-SCCCCC--BCGGGCCGGGCSEEEECC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCc-eEEEEeccccCCCccccccccccc-cccccc--hhhhhhhhcccceeeecc
Confidence            4679999999999999999999988765 777775544222211 11 11111 111111  111235568999999874

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.09  E-value=0.0022  Score=47.12  Aligned_cols=71  Identities=18%  Similarity=0.247  Sum_probs=48.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPR  121 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~~  121 (353)
                      +||+|+|. |..|.++|..|...|.  ++.++|.+.......++.+   ...+..  +..+ +..+.+.|+||++.|.|.
T Consensus         6 K~v~ViGl-G~sG~s~a~~L~~~g~--~v~~~D~~~~~~~~~~~~~---~~~~~~--~~~~-~~~~~~~d~vi~SPGi~~   76 (93)
T d2jfga1           6 KNVVIIGL-GLTGLSCVDFFLARGV--TPRVMDTRMTPPGLDKLPE---AVERHT--GSLN-DEWLMAADLIVASPGIAL   76 (93)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTC--CCEEEESSSSCTTGGGSCT---TSCEEE--SBCC-HHHHHHCSEEEECTTSCT
T ss_pred             CEEEEEeE-CHHHHHHHHHHHHCCC--EEEEeeCCcCchhHHHHhh---ccceee--cccc-hhhhccCCEEEECCCCCC
Confidence            48999999 9999999999999987  8899998652111111221   122222  2222 466889999999988764

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.06  E-value=0.03  Score=48.62  Aligned_cols=156  Identities=13%  Similarity=0.085  Sum_probs=84.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch---h-------hhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL---E-------NAL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~---~-------~al  107 (353)
                      .+.+.|+||++-+|..+|..|+..|.  .|++.|+++  ++..+.++....  ..+..+. .-+|.   +       +.+
T Consensus         8 gK~alVTGas~GIG~aiA~~la~~Ga--~V~~~~r~~~~l~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           8 AKTVLVTGGTKGIGHAIVEEFAGFGA--VIHTCARNEYELNECLSKWQKKG--FQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC--CceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            45788889999999999999999998  999999986  344444554432  1222221 11221   1       222


Q ss_pred             C-CCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhC
Q 018618          108 T-GMDLVIIPAGVPRK-P--GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAG  176 (353)
Q Consensus       108 ~-~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~  176 (353)
                      . .-|++|..+|.... +  ..+   ....+..|+..    .+...+.+++.. .+.||++|.-....            
T Consensus        84 ~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~------------  150 (259)
T d1xq1a_          84 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV------------  150 (259)
T ss_dssp             TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------------
T ss_pred             CCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccc------------
Confidence            2 37999999886432 1  223   23344555544    455555555443 45666665433211            


Q ss_pred             CCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          177 TYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       177 ~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +.+..-.++.+.-.-..+-+.+|..++  +..|++-.+-
T Consensus       151 ~~~~~~~Y~asKaal~~lt~~lA~e~~--~~gIrVN~V~  187 (259)
T d1xq1a_         151 SASVGSIYSATKGALNQLARNLACEWA--SDGIRANAVA  187 (259)
T ss_dssp             ----CCHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEE
T ss_pred             cccccccccccccchhhhhHHHHHHhc--ccCeEEEEec
Confidence            122223344444344456778888774  4556554443

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=96.05  E-value=0.015  Score=50.55  Aligned_cols=152  Identities=18%  Similarity=0.181  Sum_probs=85.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc---h-------hhhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ---L-------ENAL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d---~-------~~al  107 (353)
                      .+.+.|+||++-+|..++..|++.|.  +|++.|+++  +.....++..     ....+. .-+|   .       .+.+
T Consensus         5 gK~alVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   77 (254)
T d1hdca_           5 GKTVIITGGARGLGAEAARQAVAAGA--RVVLADVLDEEGAATARELGD-----AARYQHLDVTIEEDWQRVVAYAREEF   77 (254)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTGG-----GEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhCC-----ceEEEEcccCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999998  999999876  2222333321     111111 1112   1       1234


Q ss_pred             CCCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          108 TGMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      ..-|++|..||.....   ..+   ....+..|+.    ..+.+.+.+++. ..+.||+++.-....            +
T Consensus        78 g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-~~G~II~isS~~~~~------------~  144 (254)
T d1hdca_          78 GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDA-GGGSIVNISSAAGLM------------G  144 (254)
T ss_dssp             SCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS------------C
T ss_pred             CCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhc-CCCeecccccchhcc------------c
Confidence            6899999998864322   122   3344555554    445555555544 456777776432211            1


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .|..-.++.+.-.-..|-+.+|..++  +..|++-.+
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~a--~~gIrVN~I  179 (254)
T d1hdca_         145 LALTSSYGASKWGVRGLSKLAAVELG--TDRIRVNSV  179 (254)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHhC--CCceEEEEe
Confidence            22222333333333456677777763  445544444

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.04  E-value=0.0015  Score=56.37  Aligned_cols=159  Identities=13%  Similarity=0.065  Sum_probs=82.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCCCC-C-eEEEEeCCCchhhhh--CCCcEEEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTG-A-VVRGFLGQPQLENAL--TGMDLVII  115 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~-~-~v~~~~~t~d~~~al--~~ADiVIi  115 (353)
                      .++|.|+||+|-+|..++..|++.|.  +|+++|.++.. ....-..+.... . .....  .....+.+  ..-|++|.
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~iD~lIn   77 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNW--WVASIDVVENEEASASVIVKMTDSFTEQADQV--TAEVGKLLGDQKVDAILC   77 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC--EEEEEESSCCTTSSEEEECCCCSCHHHHHHHH--HHHHHHHHTTCCEEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCccccccccceeecccCcHHHHHHH--HHHHHHHhCCCCceEEEE
Confidence            35899999999999999999999998  99999986511 000000000000 0 00000  00111222  24699999


Q ss_pred             cCCCCC--CC-CCC----HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618          116 PAGVPR--KP-GMT----RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       116 ~ag~~~--~~-g~~----r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      .+|...  .+ ...    ....+..|+.....+++.+..+- +.+.|++++.-...            .+.|..-.++.+
T Consensus        78 nAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~------------~~~~~~~~Y~as  145 (236)
T d1dhra_          78 VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL------------DGTPGMIGYGMA  145 (236)
T ss_dssp             CCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------------SCCTTBHHHHHH
T ss_pred             CCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc------------CCccCCcccHHH
Confidence            887421  11 122    22345566655555555555443 45777776542211            122222223333


Q ss_pred             hhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          188 MLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       188 ~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .-.-..|-+.+|..++-.+..|++..+.
T Consensus       146 Kaal~~lt~~la~El~~~~~gI~vn~v~  173 (236)
T d1dhra_         146 KGAVHQLCQSLAGKNSGMPSGAAAIAVL  173 (236)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEE
T ss_pred             HHHHHHHHHHHHHHhccCCCcEEEEEEE
Confidence            3333445666666665435566665554

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.03  E-value=0.042  Score=47.07  Aligned_cols=159  Identities=14%  Similarity=0.170  Sum_probs=87.7

Q ss_pred             CCCeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCc----------hhhh
Q 018618           40 AGFKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ----------LENA  106 (353)
Q Consensus        40 ~~~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d----------~~~a  106 (353)
                      +.+++.|+||+|  -+|.++|..|++.|.  +|++.|+++ ....+.++............ ...+          ..+.
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~--~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQC-DVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEEC-CTTCHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHhhcCCcceeec-ccchHHHHHHHHHHhhhc
Confidence            456899999966  488999999999998  999999987 44444333322111111111 1111          1223


Q ss_pred             hCCCcEEEEcCCCCCCCCC--------C---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHH
Q 018618          107 LTGMDLVIIPAGVPRKPGM--------T---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       107 l~~ADiVIi~ag~~~~~g~--------~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                      +...|++|..++.......        .   ......-|......+.+.+..+- +...++++|.....           
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~-----------  149 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-----------  149 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-----------
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc-----------
Confidence            3556788887764321111        1   11223445555666666655544 34455555543211           


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                       .+.|..-.++.+.-....+-+.+|+.++  ++.|++-.+-
T Consensus       150 -~~~~~~~~Y~~sKaal~~ltr~lA~el~--~~gIrVN~I~  187 (258)
T d1qsga_         150 -RAIPNYNVMGLAKASLEANVRYMANAMG--PEGVRVNAIS  187 (258)
T ss_dssp             -SBCTTTTHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEEE
T ss_pred             -cCCCCcHHHHHHHHHHHHHHHHHHHHhC--ccCceeeccc
Confidence             1223223344544444567888999986  6667666554

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.01  E-value=0.018  Score=49.14  Aligned_cols=158  Identities=15%  Similarity=0.056  Sum_probs=79.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCe-EEEE-eCCCchhhh--hCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAV-VRGF-LGQPQLENA--LTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~-v~~~-~~t~d~~~a--l~~ADiVIi~a  117 (353)
                      .||.|+||+|-+|..++..|++.|.  +|+++|+++.. ...+......... .... .........  ...-|++|..|
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~--~V~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnA   79 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGY--TVLNIDLSAND-QADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVA   79 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTE--EEEEEESSCCT-TSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCchh-cccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECC
Confidence            3899999999999999999999998  99999987511 0000000000000 0000 000011121  24469999998


Q ss_pred             CCCCC--C-CCC----HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechh
Q 018618          118 GVPRK--P-GMT----RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTML  189 (353)
Q Consensus       118 g~~~~--~-g~~----r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~l  189 (353)
                      |....  + ..+    ....+..|+.....+++....+- +.+.++++|.....            .+.|..-.++.+.-
T Consensus        80 G~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~------------~~~~~~~~Y~asKa  147 (235)
T d1ooea_          80 GGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM------------GPTPSMIGYGMAKA  147 (235)
T ss_dssp             CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG------------SCCTTBHHHHHHHH
T ss_pred             cccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc------------CCcccccchHHHHH
Confidence            85321  1 122    22235566655544444444432 35677776532211            12222222333333


Q ss_pred             hHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          190 DVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       190 d~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ....|-+.+|..++-.+..|++..+
T Consensus       148 al~~l~~~la~e~~~~~~~i~v~~i  172 (235)
T d1ooea_         148 AVHHLTSSLAAKDSGLPDNSAVLTI  172 (235)
T ss_dssp             HHHHHHHHHHSTTSSCCTTCEEEEE
T ss_pred             HHHHHHHHHHHHhccCCCceEEEEE
Confidence            3445666777666533455554444

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.00  E-value=0.01  Score=48.91  Aligned_cols=73  Identities=18%  Similarity=0.303  Sum_probs=43.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC---CcHHHHHHHhc--CC--CCCeEEEEeCCCchhhhhCCCcEE
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV---NTPGVTADISH--MD--TGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~---~~~~~~~dl~~--~~--~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      |+||+|+||+|++|.-+...|...+.+ +|.-+-..   ...|....-.+  ..  ........   .+......++|+|
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~-ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dvv   76 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHM-TITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM---SDVRDFSADVDVV   76 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTE-EEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEE---SCGGGTCTTCCEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCC-ceEeeEeecccccccccccccccccccccccccccc---hhhhhhhccccee
Confidence            579999999999999999999988754 55444221   11222111111  11  11223322   2334556899999


Q ss_pred             EEcC
Q 018618          114 IIPA  117 (353)
Q Consensus       114 Ii~a  117 (353)
                      +.+.
T Consensus        77 f~al   80 (179)
T d2g17a1          77 FLAT   80 (179)
T ss_dssp             EECS
T ss_pred             eccc
Confidence            9974

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.99  E-value=0.004  Score=52.20  Aligned_cols=98  Identities=17%  Similarity=0.165  Sum_probs=61.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC-
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV-  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~-  119 (353)
                      .++|+|+|. |.+|+.++..+..-|.  ++..+|..............     ..    ..++++.++.||+|++.... 
T Consensus        47 g~tvgIiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~~~~~~~~-----~~----~~~l~~ll~~sD~v~l~~plt  114 (191)
T d1gdha1          47 NKTLGIYGF-GSIGQALAKRAQGFDM--DIDYFDTHRASSSDEASYQA-----TF----HDSLDSLLSVSQFFSLNAPST  114 (191)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSCCCHHHHHHHTC-----EE----CSSHHHHHHHCSEEEECCCCC
T ss_pred             ccceEEeec-ccchHHHHHHHHhhcc--ccccccccccccchhhcccc-----cc----cCCHHHHHhhCCeEEecCCCC
Confidence            469999999 9999999998886676  99999986521111111111     11    24678899999999997432 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                      +...++-..              +.+...-|++++||++  .-+|.-
T Consensus       115 ~~T~~li~~--------------~~l~~mk~~a~lIN~sRG~ivde~  147 (191)
T d1gdha1         115 PETRYFFNK--------------ATIKSLPQGAIVVNTARGDLVDNE  147 (191)
T ss_dssp             TTTTTCBSH--------------HHHTTSCTTEEEEECSCGGGBCHH
T ss_pred             chHhheecH--------------HHhhCcCCccEEEecCCccchhhH
Confidence            222232111              1223344789999987  335543

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.035  Score=44.74  Aligned_cols=99  Identities=18%  Similarity=0.168  Sum_probs=60.2

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhh--------C
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENAL--------T  108 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al--------~  108 (353)
                      -.+..+|.|+|+ |.+|...+..+...|. ..|+.+|.++ ....+.++     +..........+..+..        .
T Consensus        24 ~~~gd~VlI~G~-G~iG~~~~~~a~~~G~-~~Vi~~d~~~~rl~~a~~~-----Ga~~~~~~~~~~~~~~~~~~~~~~g~   96 (171)
T d1pl8a2          24 VTLGHKVLVCGA-GPIGMVTLLVAKAMGA-AQVVVTDLSATRLSKAKEI-----GADLVLQISKESPQEIARKVEGQLGC   96 (171)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHT-----TCSEEEECSSCCHHHHHHHHHHHHTS
T ss_pred             CCCCCEEEEECC-CccHHHHHHHHHHcCC-ceEEeccCCHHHHHHHHHh-----CCcccccccccccccccccccccCCC
Confidence            344568999998 9999999988888775 4899999876 22233322     12222211223333222        4


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHhhCCCcEEEEecCCCC
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG-IAKCCPNATVNLISNPVN  162 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~-i~~~~p~a~viv~tNPv~  162 (353)
                      ++|+||.+.|.+                   ...+. +.-..|.+.+++++.|.+
T Consensus        97 g~Dvvid~~G~~-------------------~~~~~a~~~~~~gG~iv~~G~~~~  132 (171)
T d1pl8a2          97 KPEVTIECTGAE-------------------ASIQAGIYATRSGGTLVLVGLGSE  132 (171)
T ss_dssp             CCSEEEECSCCH-------------------HHHHHHHHHSCTTCEEEECSCCCS
T ss_pred             CceEEEeccCCc-------------------hhHHHHHHHhcCCCEEEEEecCCC
Confidence            799999987633                   11222 222247888888876543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.93  E-value=0.078  Score=46.90  Aligned_cols=162  Identities=12%  Similarity=0.072  Sum_probs=90.9

Q ss_pred             ccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCC---CCCeEEEEeC-CCchh----
Q 018618           35 AKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMD---TGAVVRGFLG-QPQLE----  104 (353)
Q Consensus        35 ~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~---~~~~v~~~~~-t~d~~----  104 (353)
                      +||.=+.+.+.|+||++-+|..++..|+..|.  +|++.|++.  ++..+.++....   ...++..+.. -+|.+    
T Consensus         6 ~~g~L~gKvalITGas~GIG~aia~~la~~Ga--~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~   83 (297)
T d1yxma1           6 APGLLQGQVAIVTGGATGIGKAIVKELLELGS--NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNN   83 (297)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHH
Confidence            34444556788999999999999999999998  999999986  444455554321   1223333221 12221    


Q ss_pred             ------hhhCCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHH
Q 018618          105 ------NALTGMDLVIIPAGVPRKPG---MT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIA  168 (353)
Q Consensus       105 ------~al~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~  168 (353)
                            +.+..-|++|..+|......   .+   ....+..|+..    .+..++.+.+.. .+.+++++.....     
T Consensus        84 ~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~~-----  157 (297)
T d1yxma1          84 LVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTKA-----  157 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCTT-----
T ss_pred             HHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccccccc-----
Confidence                  22457899999988643221   22   33445566544    444555555443 3445555432211     


Q ss_pred             HHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          169 AEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       169 ~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                              ++|..-.++.+.-.-..+-+.+|..++  +..|++-.+
T Consensus       158 --------~~~~~~~Y~asKaal~~ltk~lA~el~--~~gIrVN~I  193 (297)
T d1yxma1         158 --------GFPLAVHSGAARAGVYNLTKSLALEWA--CSGIRINCV  193 (297)
T ss_dssp             --------CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             --------cccccccchhHHHHHHHHHHHHHHHhc--ccCceEEEe
Confidence                    122222233333334456788888874  555654444

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=95.86  E-value=0.0015  Score=52.36  Aligned_cols=62  Identities=10%  Similarity=0.061  Sum_probs=34.6

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      |++||+ |+||++++..|...+.  ...+++++..  .+.++.+... ..      ..+.+++++.+|+||++.
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~--~~~v~~R~~~--~~~~l~~~~~-~~------~~~~~~~~~~~DiVil~v   63 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYE--IGYILSRSID--RARNLAEVYG-GK------AATLEKHPELNGVVFVIV   63 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC------CCCEECSSHH--HHHHHHHHTC-CC------CCSSCCCCC---CEEECS
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCC--EEEEEeCChh--hhcchhhccc-cc------ccchhhhhccCcEEEEec
Confidence            689999 9999999987755433  2346777542  2223332211 10      112357789999999985

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=95.86  E-value=0.0097  Score=51.42  Aligned_cols=154  Identities=18%  Similarity=0.129  Sum_probs=83.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCch-------hhhhCCCcE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL-------ENALTGMDL  112 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~-------~~al~~ADi  112 (353)
                      +++.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++.......++.   ...+.       .+.+..-|+
T Consensus         6 K~~lITGas~GIG~aia~~l~~~G~--~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           6 KAVLITGAAHGIGRATLELFAKEGA--RLVACDIEEGPLREAAEAVGAHPVVMDVA---DPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTTCEEEECCTT---CHHHHHHHHHHHHHHHSSCCE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCCeEEEEecC---CHHHHHHHHHHHHHhcCCceE
Confidence            4788999989999999999999998  999999976  222222121000000100   00111       233457899


Q ss_pred             EEEcCCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhh---CCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          113 VIIPAGVPRKP---GMT---RDDLFNINAGIVRTLCEGIAKC---CPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       113 VIi~ag~~~~~---g~~---r~~~~~~N~~i~~~i~~~i~~~---~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      +|..||.....   ..+   ....+..|+.....+.+.+..+   ...+.+++.+. ...            .+.|..-.
T Consensus        81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~------------~~~~~~~~  147 (242)
T d1ulsa_          81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVY------------LGNLGQAN  147 (242)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGG------------GCCTTCHH
T ss_pred             EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccc------------cCCCCCcc
Confidence            99999865322   122   3344556665554444443332   23444544432 110            12333333


Q ss_pred             EeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          184 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ++.+.-.-..+-+.+|..++  +..|++-.+-
T Consensus       148 Y~asKaal~~ltk~lA~ela--~~gIrVN~I~  177 (242)
T d1ulsa_         148 YAASMAGVVGLTRTLALELG--RWGIRVNTLA  177 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHh--hhCcEEEEEe
Confidence            44443334456777888774  4556555443

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.86  E-value=0.077  Score=45.34  Aligned_cols=156  Identities=15%  Similarity=0.159  Sum_probs=88.4

Q ss_pred             e-EEEEcCCCCcHHHHHHHHHhCCC-----CcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCch----------
Q 018618           43 K-VAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQL----------  103 (353)
Q Consensus        43 K-I~IiGa~G~vG~~la~~l~~~~~-----~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d~----------  103 (353)
                      + |.|+||++-+|..++..|++.|.     ...++++|+++  ++..+.++....  .....+. .-+|.          
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g--~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEG--ALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTT--CEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHH
Confidence            5 56789999999999999998875     13489999876  344455555432  2332221 11222          


Q ss_pred             hhhhCCCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHH
Q 018618          104 ENALTGMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  173 (353)
Q Consensus       104 ~~al~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~  173 (353)
                      .+.+..-|++|..+|......   .+   ....+..|+    ...+...+.+++. ..+.+|+++.-....         
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~-~~G~Ii~isS~~~~~---------  149 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQ-HSGHIFFITSVAATK---------  149 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCGGGTS---------
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhc-CCCceEEEechhhcC---------
Confidence            233457999999998653221   22   233445554    4555666666654 456677765433211         


Q ss_pred             HhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          174 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       174 ~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                         ++|..-.++.+.-.-..|-+.+|..++  +..|++-.+-
T Consensus       150 ---~~~~~~~Y~asK~al~~lt~~la~el~--~~gIrvn~i~  186 (240)
T d2bd0a1         150 ---AFRHSSIYCMSKFGQRGLVETMRLYAR--KCNVRITDVQ  186 (240)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHHHHHHT--TTTEEEEEEE
T ss_pred             ---CCCCChHHHHHHHHHHHHHHHHHHHhC--cCCeEEEEee
Confidence               233222344443333456677777764  4556554443

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=95.84  E-value=0.041  Score=44.11  Aligned_cols=102  Identities=16%  Similarity=0.109  Sum_probs=61.1

Q ss_pred             CCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchh---hhh-----
Q 018618           37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLE---NAL-----  107 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~---~al-----  107 (353)
                      +..+..+|.|+|+ |.+|...+..+...|.  +++.+|.++ ....+.++..   ...+.......+..   +.+     
T Consensus        23 ~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga--~vi~v~~~~~r~~~a~~~ga---~~~~~~~~~~~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          23 GVQLGTTVLVIGA-GPIGLVSVLAAKAYGA--FVVCTARSPRRLEVAKNCGA---DVTLVVDPAKEEESSIIERIRSAIG   96 (170)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTTC---SEEEECCTTTSCHHHHHHHHHHHSS
T ss_pred             CCCCCCEEEEEcc-cccchhhHhhHhhhcc--cccccchHHHHHHHHHHcCC---cEEEeccccccccchhhhhhhcccc
Confidence            4455669999997 9999999998888886  899999876 2233333321   11111111111211   111     


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      .++|+||.++|.+.                  .+-..++-..|.+.+++++.|..
T Consensus        97 ~g~D~vid~~g~~~------------------~~~~a~~~~~~~G~iv~~G~~~~  133 (170)
T d1e3ja2          97 DLPNVTIDCSGNEK------------------CITIGINITRTGGTLMLVGMGSQ  133 (170)
T ss_dssp             SCCSEEEECSCCHH------------------HHHHHHHHSCTTCEEEECSCCSS
T ss_pred             cCCceeeecCCChH------------------HHHHHHHHHhcCCceEEEecCCC
Confidence            56999999876430                  11122333358899999886654

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=95.82  E-value=0.013  Score=46.90  Aligned_cols=61  Identities=15%  Similarity=0.124  Sum_probs=38.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ||++||. |.||+.+|..|...++  .++ ++....+.  .++..... . ..     .. .+.+.++|++|+..
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~--~~~-~~~~~~~~--~~~~~~~~-~-~~-----~~-~~~~~~~~~~i~~~   62 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFP--TLV-WNRTFEKA--LRHQEEFG-S-EA-----VP-LERVAEARVIFTCL   62 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSC--EEE-ECSSTHHH--HHHHHHHC-C-EE-----CC-GGGGGGCSEEEECC
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCC--EEE-EeCCHHHH--HHHHHHcC-C-cc-----cc-cccccceeEEEecc
Confidence            8999999 9999999999988776  554 45443221  12221110 1 11     12 35567899988863

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=95.80  E-value=0.1  Score=44.87  Aligned_cols=114  Identities=17%  Similarity=0.142  Sum_probs=66.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEe--CCCch----------hhhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFL--GQPQL----------ENAL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~--~t~d~----------~~al  107 (353)
                      .+.|.|+||++-+|..+|..|+..|.  .+++++.+. ......++........+..+.  .+.+.          .+.+
T Consensus         5 gK~vlITGgs~GIG~~~A~~la~~G~--~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           5 NKNVIFVAALGGIGLDTSRELVKRNL--KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTCC--SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC--EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            34788999988999999999999997  666665443 222222222211112222211  11121          1224


Q ss_pred             CCCcEEEEcCCCCCCCCCCHHHHHHHHHH----HHHHHHHHHHhh--CCCcEEEEec
Q 018618          108 TGMDLVIIPAGVPRKPGMTRDDLFNINAG----IVRTLCEGIAKC--CPNATVNLIS  158 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g~~r~~~~~~N~~----i~~~i~~~i~~~--~p~a~viv~t  158 (353)
                      ...|++|..||...  ..+....+..|+.    ..+.+.+.+.+.  .+.+.||+++
T Consensus        83 g~iDilvnnAG~~~--~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~is  137 (254)
T d1sbya1          83 KTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC  137 (254)
T ss_dssp             SCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred             CCCCEEEeCCCCCC--HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEe
Confidence            67899999998653  2334455566654    566666677543  3567777765

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=95.68  E-value=0.047  Score=46.75  Aligned_cols=153  Identities=17%  Similarity=0.121  Sum_probs=90.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCc---h-------hhhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQ---L-------ENAL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d---~-------~~al  107 (353)
                      .+++.|+||++.+|..+|..|++.|.  +|++.|++.  +.....++.     ..+..+.. -.+   .       .+.+
T Consensus         5 gK~alItGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dls~~~~i~~~~~~i~~~~   77 (241)
T d2a4ka1           5 GKTILVTGAASGIGRAALDLFAREGA--SLVAVDREERLLAEAVAALE-----AEAIAVVADVSDPKAVEAVFAEALEEF   77 (241)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTCC-----SSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcC-----CceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            34788889999999999999999998  999999876  222222222     12221111 111   1       2334


Q ss_pred             CCCcEEEEcCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          108 TGMDLVIIPAGVPRK-P--GMT---RDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~-~--g~~---r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      ..-|++|..+|.... +  ..+   ....+..|+.....+.+....+.. ...++++|.......+-             
T Consensus        78 g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~~~~-------------  144 (241)
T d2a4ka1          78 GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFG-------------  144 (241)
T ss_dssp             SCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCHHH-------------
T ss_pred             CCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccccccC-------------
Confidence            679999998875432 1  122   345567788888888777776653 44555555443222110             


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .-.++.+......+-+.+|+.++  +..|++-.+-
T Consensus       145 ~~~Y~~sK~al~~lt~~lA~el~--~~gIrvN~I~  177 (241)
T d2a4ka1         145 LAHYAAGKLGVVGLARTLALELA--RKGVRVNVLL  177 (241)
T ss_dssp             HHHHHHCSSHHHHHHHHHHHHHT--TTTCEEEEEE
T ss_pred             ccccchhhHHHHHHHHHHHHHHh--HhCCEEeeec
Confidence            11244444445567889999985  4556554443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.67  E-value=0.009  Score=49.50  Aligned_cols=87  Identities=23%  Similarity=0.244  Sum_probs=57.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|+|. |.+|..++..+..-|.  +|..+|+...+        ..  .  ..   ..++++.+++||+|++..  |
T Consensus        42 gk~vgIiG~-G~IG~~va~~l~~~g~--~v~~~d~~~~~--------~~--~--~~---~~~l~ell~~sDiv~~~~--p  101 (181)
T d1qp8a1          42 GEKVAVLGL-GEIGTRVGKILAALGA--QVRGFSRTPKE--------GP--W--RF---TNSLEEALREARAAVCAL--P  101 (181)
T ss_dssp             TCEEEEESC-STHHHHHHHHHHHTTC--EEEEECSSCCC--------SS--S--CC---BSCSHHHHTTCSEEEECC--C
T ss_pred             CceEEEecc-ccccccceeeeecccc--ccccccccccc--------cc--e--ee---eechhhhhhccchhhccc--c
Confidence            458999999 9999999999987777  99999986421        11  0  01   135688999999999964  2


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                      ..+. ++ .++  |       .+.+....|++++|+++
T Consensus       102 l~~~-t~-~li--~-------~~~l~~mk~~ailIN~~  128 (181)
T d1qp8a1         102 LNKH-TR-GLV--K-------YQHLALMAEDAVFVNVG  128 (181)
T ss_dssp             CSTT-TT-TCB--C-------HHHHTTSCTTCEEEECS
T ss_pred             cccc-cc-ccc--c-------cceeeeccccceEEecc
Confidence            2211 11 000  1       13334445889999987

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.65  E-value=0.044  Score=43.29  Aligned_cols=100  Identities=8%  Similarity=0.022  Sum_probs=61.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCch----hhhhCCCcEEEE
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQL----ENALTGMDLVII  115 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~----~~al~~ADiVIi  115 (353)
                      -+|.|+|. |.+|..++..|...+.  +++++|.++  ......++..... .-+.+  ..+|.    +..+..||.||+
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~--~v~vId~d~~~~~~~~~~~~~~~~-~vi~G--d~~d~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQ--NVTVISNLPEDDIKQLEQRLGDNA-DVIPG--DSNDSSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTC--CEEEEECCCHHHHHHHHHHHCTTC-EEEES--CTTSHHHHHHHTTTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC--CEEEEeccchhHHHHHHHhhcCCc-EEEEc--cCcchHHHHHhccccCCEEEE
Confidence            47999999 9999999999999887  889999876  2223333332111 11221  12232    234578999999


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCC
Q 018618          116 PAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVN  162 (353)
Q Consensus       116 ~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~  162 (353)
                      +.+.         |  ..|+.+    +..+++.+|+..++.-+ +|-+
T Consensus        78 ~~~~---------d--~~n~~~----~~~~r~~~~~~~iia~~~~~~~  110 (153)
T d1id1a_          78 LSDN---------D--ADNAFV----VLSAKDMSSDVKTVLAVSDSKN  110 (153)
T ss_dssp             CSSC---------H--HHHHHH----HHHHHHHTSSSCEEEECSSGGG
T ss_pred             cccc---------H--HHHHHH----HHHHHHhCCCCceEEEEcCHHH
Confidence            8521         1  344433    34566778887665554 5543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.62  E-value=0.0068  Score=50.38  Aligned_cols=95  Identities=23%  Similarity=0.362  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC-C
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG-V  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag-~  119 (353)
                      .++|+|+|. |.+|+.++..+..-|.  +|..+|.........+..       +..    .++++.++.||+|++... .
T Consensus        44 ~k~vgiiG~-G~IG~~va~~~~~fg~--~v~~~d~~~~~~~~~~~~-------~~~----~~l~ell~~sDiv~~~~Plt  109 (184)
T d1ygya1          44 GKTVGVVGL-GRIGQLVAQRIAAFGA--YVVAYDPYVSPARAAQLG-------IEL----LSLDDLLARADFISVHLPKT  109 (184)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHTTTC--EEEEECTTSCHHHHHHHT-------CEE----CCHHHHHHHCSEEEECCCCS
T ss_pred             ceeeeeccc-cchhHHHHHHhhhccc--eEEeecCCCChhHHhhcC-------cee----ccHHHHHhhCCEEEEcCCCC
Confidence            458999999 9999999998876665  999999865333322221       111    356789999999999743 2


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCc
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNS  163 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~  163 (353)
                      +...++-       |.       +.+....|++++|+++  .=+|.
T Consensus       110 ~~T~~li-------n~-------~~l~~mk~~a~lIN~sRG~iVde  141 (184)
T d1ygya1         110 PETAGLI-------DK-------EALAKTKPGVIIVNAARGGLVDE  141 (184)
T ss_dssp             TTTTTCB-------CH-------HHHTTSCTTEEEEECSCTTSBCH
T ss_pred             chhhhhh-------hH-------HHHhhhCCCceEEEecchhhhhh
Confidence            2222221       11       2233345789999997  33553

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.59  E-value=0.003  Score=54.72  Aligned_cols=152  Identities=16%  Similarity=0.194  Sum_probs=82.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc--HH---HHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT--PG---VTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~--~~---~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      +++.|+||++-+|..++..|++.|.  +|++.|+++.  +.   ...|+.+..   .++...  ....+.+..-|++|..
T Consensus         8 K~~lITGas~GIG~aia~~la~~Ga--~V~~~~r~~~~~~~~~~~~~Dv~~~~---~v~~~~--~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           8 RSVLVTGGNRGIGLAIAQRLAADGH--KVAVTHRGSGAPKGLFGVEVDVTDSD---AVDRAF--TAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTCHH---HHHHHH--HHHHHHHSSCSEEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCcchhcCceEEEEecCCHH---HHHHHH--HHHHHhcCCceEEEee
Confidence            4788889989999999999999998  9999998761  10   111111110   011000  1223445689999999


Q ss_pred             CCCCCCC---CCC---HHHHHHHHHHH----HHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee
Q 018618          117 AGVPRKP---GMT---RDDLFNINAGI----VRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV  186 (353)
Q Consensus       117 ag~~~~~---g~~---r~~~~~~N~~i----~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~  186 (353)
                      +|.....   ..+   ....+..|+..    .+..++.+.+. ..+.||+++.-....            +.+..-.++.
T Consensus        81 AG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~g~Iv~isS~~~~~------------~~~~~~~Y~a  147 (237)
T d1uzma1          81 AGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRN-KFGRMIFIGSVSGLW------------GIGNQANYAA  147 (237)
T ss_dssp             CSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEEECCCCC-----------------CCHHHHH
T ss_pred             ecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccc-CCCceEEEcchhhcc------------CCcccHHHHH
Confidence            8864321   222   23345556544    44555555544 456667666433322            1111222344


Q ss_pred             chhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          187 TMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       187 t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      +.-.-..+-+.+|..++  +..|++-.+-
T Consensus       148 sKaal~~lt~~lA~e~~--~~gIrVN~I~  174 (237)
T d1uzma1         148 SKAGVIGMARSIARELS--KANVTANVVA  174 (237)
T ss_dssp             HHHHHHHHHHHHHHHHG--GGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHhhhh--cCCceeeeee
Confidence            33333456677888764  4555544443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=95.54  E-value=0.041  Score=44.23  Aligned_cols=137  Identities=15%  Similarity=0.196  Sum_probs=73.3

Q ss_pred             ccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618           35 AKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        35 ~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      +.+-.+..+|.|+|+ |.+|...+..+...|.  +++.+|.++ ....+..+.-    ..+-............++.|+|
T Consensus        25 ~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga--~~i~~~~~~~~~~~a~~lGa----d~~i~~~~~~~~~~~~~~~D~v   97 (168)
T d1uufa2          25 HWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGA--HVVAFTTSEAKREAAKALGA----DEVVNSRNADEMAAHLKSFDFI   97 (168)
T ss_dssp             HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHTC----SEEEETTCHHHHHTTTTCEEEE
T ss_pred             HhCCCCCCEEEEecc-chHHHHHHHHhhcccc--cchhhccchhHHHHHhccCC----cEEEECchhhHHHHhcCCCcee
Confidence            344566779999998 9999999988888886  667788766 2233333321    1111111111222334689999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-c--hhh
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-T--MLD  190 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t--~ld  190 (353)
                      |.+.|.+.    +              +-..+.-..|.+.++.++-|.+....+...   .. -+...+++|. +  .-|
T Consensus        98 id~~g~~~----~--------------~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~---~l-~~k~~~i~Gs~~~~~~d  155 (168)
T d1uufa2          98 LNTVAAPH----N--------------LDDFTTLLKRDGTMTLVGAPATPHKSPEVF---NL-IMKRRAIAGSMIGGIPE  155 (168)
T ss_dssp             EECCSSCC----C--------------HHHHHTTEEEEEEEEECCCC-------CHH---HH-HTTTCEEEECCSCCHHH
T ss_pred             eeeeecch----h--------------HHHHHHHHhcCCEEEEeccCCCCcccccHH---HH-HHCCcEEEEEeecCHHH
Confidence            99876442    1              112233345888888887654422211111   11 1334578887 3  333


Q ss_pred             HHHHHHHHHH
Q 018618          191 VVRANTFVAE  200 (353)
Q Consensus       191 ~~R~~~~lA~  200 (353)
                      ..++-.++++
T Consensus       156 ~~e~l~l~a~  165 (168)
T d1uufa2         156 TQEMLDFCAE  165 (168)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            3344444444

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=95.53  E-value=0.13  Score=44.67  Aligned_cols=150  Identities=21%  Similarity=0.197  Sum_probs=83.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEe-CCCc----------hhhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFL-GQPQ----------LENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~-~t~d----------~~~al~  108 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|+++  +.....++..     .+..+. .-++          ..+.+.
T Consensus         6 K~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~l~~~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           6 EAVLITGGASGLGRALVDRFVAEGA--KVAVLDKSAERLAELETDHGD-----NVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGG-----GEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHcCC-----CeeEEecccccHHHHHHHHHHHHHHhC
Confidence            4788999999999999999999998  999999876  3333333322     111111 1111          123356


Q ss_pred             CCcEEEEcCCCCCCC-------CCC----HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHH
Q 018618          109 GMDLVIIPAGVPRKP-------GMT----RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFK  173 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~-------g~~----r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~  173 (353)
                      ..|++|..+|.....       .+.    ....+..|+    ...+...+.+++.. ..+|++.|. ....         
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~-~~~~---------  147 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISN-AGFY---------  147 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCG-GGTS---------
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeec-hhcc---------
Confidence            889999998853211       111    223344454    44556666666542 344444432 1111         


Q ss_pred             HhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          174 KAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       174 ~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                         +.|..-.++.+.-....|-+.+|..++  +. |++-.+-
T Consensus       148 ---~~~~~~~Y~asKaal~~ltr~lA~ela--~~-IrVN~I~  183 (276)
T d1bdba_         148 ---PNGGGPLYTAAKHAIVGLVRELAFELA--PY-VRVNGVG  183 (276)
T ss_dssp             ---TTSSCHHHHHHHHHHHHHHHHHHHHHT--TT-CEEEEEE
T ss_pred             ---CCCCCchHHHHHHHHHHHHHHHHHHhh--cc-eEEcccC
Confidence               122222234433333456788888886  33 6555544

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.52  E-value=0.0064  Score=51.43  Aligned_cols=33  Identities=24%  Similarity=0.374  Sum_probs=30.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +||+|||| |..|.+.|+.|.+.|.  +|.|+|.+.
T Consensus         7 ~kVvVIGa-GiaGl~~A~~L~~~G~--~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVLGS-GVIGLSSALILARKGY--SVHILARDL   39 (268)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSC
T ss_pred             CcEEEECc-cHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            49999999 9999999999999998  999999754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.47  E-value=0.081  Score=45.33  Aligned_cols=154  Identities=18%  Similarity=0.175  Sum_probs=87.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhhC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL----------ENALT  108 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al~  108 (353)
                      =|.|+||++-+|..++..|++.|.  +|++.|.+.   ++....++....  .++..+. .-+|.          .+.+.
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga--~V~i~~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC--KVLVNYARSAKAAEEVSKQIEAYG--GQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHT--CEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHHcC--CcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            466779999999999999999998  888888765   233333333211  2222221 11221          12235


Q ss_pred             CCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCC
Q 018618          109 GMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTY  178 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g---~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~  178 (353)
                      .-|++|..||......   .+   ....+..|+    ...+..++.+.+. ..+.||++|.-..          ..  +.
T Consensus        79 ~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~~G~IVnisS~~~----------~~--~~  145 (244)
T d1edoa_          79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKK-RKGRIINIASVVG----------LI--GN  145 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEECCTHH----------HH--CC
T ss_pred             CCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHc-CCcEEEEEcChhh----------cC--CC
Confidence            7899999988653221   22   223445554    4455566666554 4677777764221          11  23


Q ss_pred             CCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          179 DPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       179 ~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      |..-.++.+.-.-..|-+.+|..++  +..|++-.+-
T Consensus       146 ~~~~~Y~asKaal~~ltk~lA~el~--~~gIrvN~I~  180 (244)
T d1edoa_         146 IGQANYAAAKAGVIGFSKTAAREGA--SRNINVNVVC  180 (244)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHH--TTTEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHChHHHHHHHh--hhCcEEEEEe
Confidence            3333455544445567788888874  5556555443

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=95.46  E-value=0.043  Score=43.91  Aligned_cols=66  Identities=12%  Similarity=0.208  Sum_probs=42.7

Q ss_pred             CCeEEEEcCCCCcHHH-HHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~-la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ++||+|||+ |.+|.. ....+...+.+.-+.++|.+..  ...+.++. ..      .   .+++++.+++.|+|+++.
T Consensus         1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~-~~------~---~~~~~~l~~~~D~V~I~t   69 (164)
T d1tlta1           1 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWR-IP------Y---ADSLSSLAASCDAVFVHS   69 (164)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHT-CC------B---CSSHHHHHTTCSEEEECS
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccc-cc------c---cccchhhhhhcccccccc
Confidence            469999998 999975 4666666554434568898773  22222221 11      1   245667779999999874

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=95.46  E-value=0.0061  Score=53.18  Aligned_cols=38  Identities=18%  Similarity=0.206  Sum_probs=33.4

Q ss_pred             CCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ....++||+|||| |..|.+.|..|++.|+  +|+++|..+
T Consensus        26 ~~~~pkkV~IIGa-G~aGLsaA~~L~~~G~--~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGA-GMAGLSAAYVLAGAGH--QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECC-BHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             CCCCCCeEEEECC-CHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            3456679999999 9999999999999998  999999765

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.44  E-value=0.013  Score=47.25  Aligned_cols=66  Identities=23%  Similarity=0.270  Sum_probs=40.5

Q ss_pred             CCeEEEEcCCCCcHHH-HHHHHHhCCCCcEEEEEeCCCc--HHHHHHHhcCCCCCeEEEEeCCCchhhhhC-CCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQP-LAMLMKINPLVSVLHLYDVVNT--PGVTADISHMDTGAVVRGFLGQPQLENALT-GMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~-la~~l~~~~~~~el~L~D~~~~--~~~~~dl~~~~~~~~v~~~~~t~d~~~al~-~ADiVIi~  116 (353)
                      .+||+|||+ |.+|.. ....+...+. .+++++|.++.  ...+.++....      .   .+|+++.++ +.|+|+++
T Consensus         1 tirvgiiG~-G~~~~~~~~~~l~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~------~---~~~~~~ll~~~iD~V~I~   69 (167)
T d1xeaa1           1 SLKIAMIGL-GDIAQKAYLPVLAQWPD-IELVLCTRNPKVLGTLATRYRVSA------T---CTDYRDVLQYGVDAVMIH   69 (167)
T ss_dssp             CEEEEEECC-CHHHHHTHHHHHTTSTT-EEEEEECSCHHHHHHHHHHTTCCC------C---CSSTTGGGGGCCSEEEEC
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHHhCCC-cEEEEEECCHHHHHHHHHhccccc------c---cccHHHhcccccceeccc
Confidence            379999999 999976 4556655543 38889998762  22222222111      1   245555553 78999987


Q ss_pred             C
Q 018618          117 A  117 (353)
Q Consensus       117 a  117 (353)
                      .
T Consensus        70 t   70 (167)
T d1xeaa1          70 A   70 (167)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.059  Score=46.46  Aligned_cols=150  Identities=17%  Similarity=0.110  Sum_probs=86.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEE-eCCCc----------hhhhhC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGF-LGQPQ----------LENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~-~~t~d----------~~~al~  108 (353)
                      +.+.|+||++-+|..++..|+..|.  +|++.|+++  ++....++...      ..+ ..-+|          ..+.+.
T Consensus         7 K~alITGas~GIG~aia~~la~~Ga--~V~i~~r~~~~~~~~~~~~~~~------~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           7 KVVVVTGGGRGIGAGIVRAFVNSGA--RVVICDKDESGGRALEQELPGA------VFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHCTTE------EEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHhcCCC------eEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4688899999999999999999998  999999876  22223232221      111 01112          123346


Q ss_pred             CCcEEEEcCCCCCCCC----CCH---HHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRKPG----MTR---DDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g----~~r---~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .-|++|..+|.....+    .+.   ...+..|+    ...+...+.+++.  .+.||+++....          ..  +
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~----------~~--~  144 (250)
T d1ydea1          79 RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVG----------AI--G  144 (250)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHH----------HH--C
T ss_pred             CCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccc----------cc--c
Confidence            7899999998543222    222   23345554    4455666666654  366776654221          01  2


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+.-.-..+-+.+|+.++  +..|++-.+-
T Consensus       145 ~~~~~~Y~asKaal~~lt~~lA~e~a--~~gIrVN~I~  180 (250)
T d1ydea1         145 QAQAVPYVATKGAVTAMTKALALDES--PYGVRVNCIS  180 (250)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEE
T ss_pred             ccCcchhHHHHhhHHHHHHHHHHHhc--ccCeEEEEEe
Confidence            33333344443334457788888874  5556554443

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.38  E-value=0.054  Score=48.13  Aligned_cols=154  Identities=13%  Similarity=0.165  Sum_probs=86.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----------cHHHHHHHhcCCCCCeEEE-EeCCCchh-----
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----------TPGVTADISHMDTGAVVRG-FLGQPQLE-----  104 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----------~~~~~~dl~~~~~~~~v~~-~~~t~d~~-----  104 (353)
                      +.+.|+||++-+|..+|..|++.|.  .|++.|++.           ++..+.++....  ..... .....+.+     
T Consensus         8 KvalITGas~GIG~aiA~~la~~Ga--~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~v~~   83 (302)
T d1gz6a_           8 RVVLVTGAGGGLGRAYALAFAERGA--LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG--GKAVANYDSVEAGEKLVKT   83 (302)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT--CEEEEECCCGGGHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc--cccccccchHHHHHHHHHH
Confidence            3577779999999999999999998  999998753           112223333221  11111 11111222     


Q ss_pred             --hhhCCCcEEEEcCCCCCCC---CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHH
Q 018618          105 --NALTGMDLVIIPAGVPRKP---GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVF  172 (353)
Q Consensus       105 --~al~~ADiVIi~ag~~~~~---g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~  172 (353)
                        +.+..-|++|..||.....   .++   ....+..|+.    ..+...+.+++.. .+.||+++....          
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~----------  152 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASG----------  152 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHH----------
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhh----------
Confidence              3345799999999865322   122   2334455554    5555666666553 567777664211          


Q ss_pred             HHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          173 KKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       173 ~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      ..  +.+..-.++.+.-.-..|-+.+|..++  +..|++-.+
T Consensus       153 ~~--~~~~~~~Y~asKaal~~lt~~la~E~~--~~gIrVN~I  190 (302)
T d1gz6a_         153 IY--GNFGQANYSAAKLGLLGLANTLVIEGR--KNNIHCNTI  190 (302)
T ss_dssp             HH--CCTTCHHHHHHHHHHHHHHHHHHHHTG--GGTEEEEEE
T ss_pred             cC--CCCCcHHHHHHHHHHHHHHHHHHHHHh--ccCCceeee
Confidence            11  233233344444444556777887764  455554444

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.32  E-value=0.025  Score=46.83  Aligned_cols=93  Identities=18%  Similarity=0.214  Sum_probs=60.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      ..++|+|+|. |.+|..++..+..-+.  +|..+|... ......+..       +..   ..++++.+++||+|++...
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~~~~~~~~-------~~~---~~~l~~~l~~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDV--HLHYTDRHRLPESVEKELN-------LTW---HATREDMYPVCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTC--EEEEECSSCCCHHHHHHHT-------CEE---CSSHHHHGGGCSEEEECSC
T ss_pred             cccceeeccc-cccchhhhhhhhccCc--eEEEEeecccccccccccc-------ccc---cCCHHHHHHhccchhhccc
Confidence            4569999999 9999999999987777  899999865 222222221       111   2467889999999999753


Q ss_pred             C-CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          119 V-PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       119 ~-~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      . +...++=..              +.+....+++++|+++-
T Consensus       110 lt~~T~~li~~--------------~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         110 LHPETEHMIND--------------ETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CCTTTTTCBSH--------------HHHTTSCTTEEEEECSC
T ss_pred             ccccchhhhHH--------------HHHHhCCCCCEEEecCc
Confidence            2 222222111              12333447889999873

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=95.32  E-value=0.006  Score=49.73  Aligned_cols=74  Identities=22%  Similarity=0.192  Sum_probs=44.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCC--CCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDT--GAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~--~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      ..+||+|+|++|.+|+.++..+.+.+-+.=+..+|.......-.|+.....  ...+..   +.|+++.++++|+||=.
T Consensus         3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~---~~~~~~~~~~~DViIDF   78 (162)
T d1diha1           3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTV---QSSLDAVKDDFDVFIDF   78 (162)
T ss_dssp             CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCE---ESCSTTTTTSCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCcee---eccHHHHhcccceEEEe
Confidence            457999999999999999998887653211245565431111122222211  122332   24567788999988764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=95.29  E-value=0.082  Score=45.69  Aligned_cols=156  Identities=13%  Similarity=0.141  Sum_probs=84.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC-CeEEEEeC-CCch---h-------hhhC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG-AVVRGFLG-QPQL---E-------NALT  108 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~-~~v~~~~~-t~d~---~-------~al~  108 (353)
                      .+.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++...... ..+..+.. -+|.   +       +.+.
T Consensus         7 valVTGas~GIG~aia~~la~~Ga--~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   84 (264)
T d1spxa_           7 VAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFG   84 (264)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             EEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            456669999999999999999998  999999986  34455556544321 23333211 1121   1       2235


Q ss_pred             CCcEEEEcCCCCCC-----C--CCC---HHHHHHHHHH----HHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHH
Q 018618          109 GMDLVIIPAGVPRK-----P--GMT---RDDLFNINAG----IVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKK  174 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-----~--g~~---r~~~~~~N~~----i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~  174 (353)
                      .-|++|..+|....     +  .++   ....+..|+.    ..+...+.+++. ..++|++.|--....          
T Consensus        85 ~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~S~~~~~~----------  153 (264)
T d1spxa_          85 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-KGEIVNISSIASGLH----------  153 (264)
T ss_dssp             CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTTSSSS----------
T ss_pred             CCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccc-cCcceeeeeeccccc----------
Confidence            78999999885321     1  122   2234455554    445555555543 345554444222111          


Q ss_pred             hCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          175 AGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       175 ~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                        +.|..-.++.+.-....|-+.+|..++  +..|++-.+-
T Consensus       154 --~~~~~~~Y~asKaal~~lt~~lA~el~--~~gIrVN~V~  190 (264)
T d1spxa_         154 --ATPDFPYYSIAKAAIDQYTRNTAIDLI--QHGIRVNSIS  190 (264)
T ss_dssp             --CCTTSHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEE
T ss_pred             --cCCCchhhhhhhhhHHHHHHHHHHHhc--ccCeEEEEEe
Confidence              122222234433334456677888774  5556544443

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.22  E-value=0.0084  Score=51.16  Aligned_cols=34  Identities=15%  Similarity=0.295  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ..||+|||| |..|.++|..|++.|+  +++++|..+
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~--~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGV--DVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            469999999 9999999999999998  999999753

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.21  E-value=0.1  Score=44.72  Aligned_cols=153  Identities=9%  Similarity=0.052  Sum_probs=84.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCch-------hhhhCCCcEEE
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQL-------ENALTGMDLVI  114 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~-------~~al~~ADiVI  114 (353)
                      ...|+||++-+|..+|..|++.|.  +|++.|++. .......+.......++..   ..+.       .+.+-.-|++|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga--~V~i~~r~~~~~~~~~~~~~~~~~~dv~~---~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH--TVACHDESFKQKDELEAFAETYPQLKPMS---EQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC--EEEECCGGGGSHHHHHHHHHHCTTSEECC---CCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHhhhCcEEEeccCC---HHHHHHHHHHHHHHcCCCCEEE
Confidence            356999999999999999999998  999999876 2111111211111122211   1222       23446789999


Q ss_pred             EcCCCCC--CC--CCCHHH---HHHHH----HHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCce
Q 018618          115 IPAGVPR--KP--GMTRDD---LFNIN----AGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKL  183 (353)
Q Consensus       115 i~ag~~~--~~--g~~r~~---~~~~N----~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kv  183 (353)
                      ..+|...  .+  ..+..+   .+..|    ....+.+.+.+++.. .+.||++|.-....            +.|..-.
T Consensus        77 nNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~------------~~~~~~~  143 (252)
T d1zmta1          77 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFG------------PWKELST  143 (252)
T ss_dssp             EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTS------------CCTTCHH
T ss_pred             ECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccc------------ccccccc
Confidence            9887532  22  123222   33344    445667777777654 45666665432211            1222122


Q ss_pred             EeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          184 LGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       184 iG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      ++.+.-....|-+.+|+.++  +..|++-.+.
T Consensus       144 Y~asKaal~~lt~~lA~ela--~~gIrVN~I~  173 (252)
T d1zmta1         144 YTSARAGACTLANALSKELG--EYNIPVFAIG  173 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHG--GGTCCEEEEE
T ss_pred             cccccccHHHHHHHHHHHhc--ccCcEEEEEe
Confidence            33433334456777888875  4555544444

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=95.18  E-value=0.087  Score=45.36  Aligned_cols=156  Identities=18%  Similarity=0.150  Sum_probs=82.9

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEe-CCCch----------hhhh
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFL-GQPQL----------ENAL  107 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~-~t~d~----------~~al  107 (353)
                      +.+.|+||++-+|..+|..|++.|.  +|++.+.+.   .+.....+....  ..+..+. .-+|.          .+.+
T Consensus         7 K~alITGas~GIG~aia~~la~~G~--~Vvi~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           7 KVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEcCCChHHHHHHHHHHHHcC--CCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            3678889999999999999999998  888866554   233334444332  2222211 11221          1234


Q ss_pred             CCCcEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCCCCC
Q 018618          108 TGMDLVIIPAGVPRKPG---MT---RDDLFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGTYDP  180 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~  180 (353)
                      -.-|++|..+|......   .+   ....+..|+.....+++.+..+- .++.+++++......           .++|.
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~-----------~~~~~  151 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVM-----------TGIPN  151 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTC-----------CSCCS
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccc-----------cCCCC
Confidence            57899999988643211   22   23345556554444444444333 234444443322111           12332


Q ss_pred             CceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          181 KKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       181 ~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                      .=.++.+.-....+-+.+|..++  +..|++-.+
T Consensus       152 ~~~Y~asK~al~~l~r~lA~e~~--~~gIrvN~I  183 (259)
T d1ja9a_         152 HALYAGSKAAVEGFCRAFAVDCG--AKGVTVNCI  183 (259)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEE
T ss_pred             chhHHHHHHHHHHHHHHHHHHHh--hcCeEEecc
Confidence            22333443334457788888876  455544433

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=95.13  E-value=0.006  Score=52.07  Aligned_cols=33  Identities=21%  Similarity=0.266  Sum_probs=30.7

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |||+|||| |..|.+.|..|.+.|+  +|+|++..+
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~--~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGT--DAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTC--CEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCC--CEEEEecCC
Confidence            79999999 9999999999999998  899999765

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=95.04  E-value=0.041  Score=49.90  Aligned_cols=71  Identities=20%  Similarity=0.350  Sum_probs=49.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..++|||+ |..+..-+..+...--+.+|.++|++.  ....+.++... .+..+..   ..++++++++||+|+.+.
T Consensus       129 ~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~-~g~~v~~---~~s~~eav~~ADIi~t~T  201 (340)
T d1x7da_         129 RKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEY-SGLTIRR---ASSVAEAVKGVDIITTVT  201 (340)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTC-TTCEEEE---CSSHHHHHTTCSEEEECC
T ss_pred             ceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhc-cCCCcee---cCCHHHHHhcCCceeecc
Confidence            48999999 888876666554432257999999986  34445556432 1234443   357899999999999754

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=94.96  E-value=0.0053  Score=51.74  Aligned_cols=89  Identities=20%  Similarity=0.179  Sum_probs=58.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC-
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV-  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~-  119 (353)
                      .++|+|+|. |.+|+.++..+..-|.  +++.||.....+         .......    .++++.++.||+|++.... 
T Consensus        45 ~ktvgIiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~~---------~~~~~~~----~~l~~l~~~~D~v~~~~plt  108 (199)
T d1dxya1          45 QQTVGVMGT-GHIGQVAIKLFKGFGA--KVIAYDPYPMKG---------DHPDFDY----VSLEDLFKQSDVIDLHVPGI  108 (199)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCSS---------CCTTCEE----CCHHHHHHHCSEEEECCCCC
T ss_pred             ceeeeeeec-ccccccccccccccce--eeeccCCccchh---------hhcchhH----HHHHHHHHhcccceeeeccc
Confidence            359999999 9999999999987777  999999864210         0112222    2577889999999997421 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      +...++-       |    .   +.+....+++++|+++=
T Consensus       109 ~~T~~li-------~----~---~~l~~mk~~a~lIN~aR  134 (199)
T d1dxya1         109 EQNTHII-------N----E---AAFNLMKPGAIVINTAR  134 (199)
T ss_dssp             GGGTTSB-------C----H---HHHHHSCTTEEEEECSC
T ss_pred             ccccccc-------c----H---HHhhccCCceEEEeccc
Confidence            1111221       1    1   22333457899999973

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.94  E-value=0.04  Score=44.97  Aligned_cols=71  Identities=10%  Similarity=0.211  Sum_probs=44.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEE-EEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh--CCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~-L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al--~~ADiVIi~a  117 (353)
                      ++||+|||+ |.+|...+..+...+.+ +|+ ++|.+...+...- .........+.+   +|+++.+  .+.|+|+++.
T Consensus         1 kiki~iIG~-G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~-~~~~~~~~~~~~---~~~~~ll~~~~iD~v~I~t   74 (184)
T d1ydwa1           1 QIRIGVMGC-ADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFA-TANNYPESTKIH---GSYESLLEDPEIDALYVPL   74 (184)
T ss_dssp             CEEEEEESC-CTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHH-HHTTCCTTCEEE---SSHHHHHHCTTCCEEEECC
T ss_pred             CeEEEEEcC-CHHHHHHHHHHHhCCCC-EEEEEEeCCccccccch-hccccccceeec---CcHHHhhhccccceeeecc
Confidence            369999998 99999998888776543 655 6787652222111 111112233443   4676665  5688999874

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.029  Score=45.50  Aligned_cols=95  Identities=15%  Similarity=0.122  Sum_probs=63.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++++|+|- |.+|..+|..+...|.  .|..+|+++.++... ..+.   -.+      ..+++++..||+||.+.|..
T Consensus        24 Gk~v~V~Gy-G~iG~g~A~~~rg~G~--~V~v~e~dp~~al~A-~~dG---~~v------~~~~~a~~~adivvtaTGn~   90 (163)
T d1li4a1          24 GKVAVVAGY-GDVGKGCAQALRGFGA--RVIITEIDPINALQA-AMEG---YEV------TTMDEACQEGNIFVTTTGCI   90 (163)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCHHHHHHH-HHTT---CEE------CCHHHHTTTCSEEEECSSCS
T ss_pred             CCEEEEecc-ccccHHHHHHHHhCCC--eeEeeecccchhHHh-hcCc---eEe------eehhhhhhhccEEEecCCCc
Confidence            358999998 9999999999998887  999999987443322 1221   111      24579999999999987643


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCCCchh
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPVNSTV  165 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv~~~t  165 (353)
                      .-  ..               .+.+++.-+++++.+++ -...+-.
T Consensus        91 ~v--I~---------------~eh~~~MKdgaIL~N~Ghfd~EId~  119 (163)
T d1li4a1          91 DI--IL---------------GRHFEQMKDDAIVCNIGHFDVEIDV  119 (163)
T ss_dssp             CS--BC---------------HHHHTTCCTTEEEEECSSSTTSBCH
T ss_pred             cc--hh---------------HHHHHhccCCeEEEEeccccceecH
Confidence            21  11               12334444678888876 4444443

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.81  E-value=0.035  Score=47.82  Aligned_cols=36  Identities=17%  Similarity=0.140  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCCC--cHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~--vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +.+++.|+||+|.  +|.++|..|++.|.  +|+|.+.++
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga--~Vil~~~~~   42 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGA--QLVLTGFDR   42 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTC--EEEEEECSC
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCC--EEEEEeCCh
Confidence            4568999997654  99999999999998  999999876

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=94.77  E-value=0.055  Score=46.46  Aligned_cols=157  Identities=14%  Similarity=0.189  Sum_probs=85.8

Q ss_pred             CeEEEEcCCC--CcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCc---h-------hhhhC
Q 018618           42 FKVAILGAAG--GIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ---L-------ENALT  108 (353)
Q Consensus        42 ~KI~IiGa~G--~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d---~-------~~al~  108 (353)
                      +++.|+||+|  -+|..+|..|++.|.  +|++.|+++ ....+.++......... ....-+|   .       .+.+.
T Consensus         9 K~alITGas~~~GIG~aiA~~la~~Ga--~V~i~~~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           9 KKALVMGVTNQRSLGFAIAAKLKEAGA--EVALSYQAERLRPEAEKLAEALGGALL-FRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             CEEEEESCCCSSSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHTTCCEE-EECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEeCcHHHHHHHHHhhhccCcccc-cccccCCHHHHHHHHHHHHHhcC
Confidence            4788999976  599999999999998  899999877 33333333221111111 1111112   1       23345


Q ss_pred             CCcEEEEcCCCCCC-------CCCCHHH---HHHHHHHHHHHHHHHHHhhC-CCcEEEEecCCCCchhHHHHHHHHHhCC
Q 018618          109 GMDLVIIPAGVPRK-------PGMTRDD---LFNINAGIVRTLCEGIAKCC-PNATVNLISNPVNSTVPIAAEVFKKAGT  177 (353)
Q Consensus       109 ~ADiVIi~ag~~~~-------~g~~r~~---~~~~N~~i~~~i~~~i~~~~-p~a~viv~tNPv~~~t~~~~~~~~~~~~  177 (353)
                      .-|++|..+|....       ...+..+   .+..|+.....+++....+- ..+.+++++.-...            .+
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~------------~~  153 (256)
T d1ulua_          86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE------------KV  153 (256)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT------------SB
T ss_pred             CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhc------------CC
Confidence            78999998875321       1122222   34566666666665554332 34667766542211            12


Q ss_pred             CCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEEe
Q 018618          178 YDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVVG  215 (353)
Q Consensus       178 ~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~viG  215 (353)
                      .|..-.++.+.-.-..+-+.+|..++  +..|++-.+-
T Consensus       154 ~~~~~~Y~asKaal~~ltr~lA~ela--~~gIrVN~I~  189 (256)
T d1ulua_         154 VPKYNVMAIAKAALEASVRYLAYELG--PKGVRVNAIS  189 (256)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHG--GGTCEEEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhc--ccCCEEeeec
Confidence            23333344443334456778888875  4556544443

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.75  E-value=0.015  Score=50.08  Aligned_cols=58  Identities=19%  Similarity=0.264  Sum_probs=41.4

Q ss_pred             hHHHHHhhcCCCcccchhhhhhhhcccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           10 RIARISAHLYPPNLQNSCLRQAKCRAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .++|.+.|..=+.  .+.-.|++=+..      ||.|+|+ |.+|+.++..|+..|+ .+|+|+|.+.
T Consensus         7 e~~ry~Rqi~l~~--~g~~~Q~kL~~~------~VliiG~-GglGs~va~~La~~Gv-g~i~lvD~D~   64 (247)
T d1jw9b_           7 EMLRYNRQIILRG--FDFDGQEALKDS------RVLIVGL-GGLGCAASQYLASAGV-GNLTLLDFDT   64 (247)
T ss_dssp             HHHHTHHHHTSTT--THHHHHHHHHHC------EEEEECC-SHHHHHHHHHHHHHTC-SEEEEECCCB
T ss_pred             HHHHhhceecccc--CCHHHHHHHhCC------CEEEECC-CHHHHHHHHHHHHcCC-CeEEEECCcc
Confidence            3455555553221  222334445556      9999999 9999999999999997 4999999875

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.73  E-value=0.011  Score=48.38  Aligned_cols=75  Identities=19%  Similarity=0.309  Sum_probs=49.2

Q ss_pred             CCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCC---CeEEEEeCCCchhhhhCCCc
Q 018618           37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTG---AVVRGFLGQPQLENALTGMD  111 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~---~~v~~~~~t~d~~~al~~AD  111 (353)
                      ...+.++|.|+|+ |.++.++++.|...+   +|.+++++.  ++..+.++......   ..+..    .+++..+.++|
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~---~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d   85 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN---NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKF----SGLDVDLDGVD   85 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS---EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEE----ECTTCCCTTCC
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc---ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhh----hhhhhccchhh
Confidence            3355679999999 889999888886443   899999876  33344444432111   12332    24456678999


Q ss_pred             EEEEcCCC
Q 018618          112 LVIIPAGV  119 (353)
Q Consensus       112 iVIi~ag~  119 (353)
                      +||.+...
T Consensus        86 liIn~tp~   93 (177)
T d1nvta1          86 IIINATPI   93 (177)
T ss_dssp             EEEECSCT
T ss_pred             hhccCCcc
Confidence            99998543

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=94.71  E-value=0.34  Score=41.29  Aligned_cols=115  Identities=19%  Similarity=0.150  Sum_probs=63.5

Q ss_pred             eEEEE-cCCCCcHHHHHHHHHh---CCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeC-CCchh---hhh-----
Q 018618           43 KVAIL-GAAGGIGQPLAMLMKI---NPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLG-QPQLE---NAL-----  107 (353)
Q Consensus        43 KI~Ii-Ga~G~vG~~la~~l~~---~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~-t~d~~---~al-----  107 (353)
                      ||+|| ||++-+|..+|..|++   .|.  .|++.|+++  ++..+.++........+..+.. -+|.+   +.+     
T Consensus         7 KvalITGas~GIG~aiA~~lA~~~~~G~--~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           7 AVCVLTGASRGFGRALAPQLARLLSPGS--VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             EEEEESSCSSHHHHHHHHHHHTTBCTTC--EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHhcccCCC--EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            66555 9988999999999986   455  999999876  4444555543222234443321 12321   111     


Q ss_pred             ------CCCcEEEEcCCCCC--CCC----CC---HHHHHHHHHHHHHHHHHHHHhhC-----CCcEEEEecC
Q 018618          108 ------TGMDLVIIPAGVPR--KPG----MT---RDDLFNINAGIVRTLCEGIAKCC-----PNATVNLISN  159 (353)
Q Consensus       108 ------~~ADiVIi~ag~~~--~~g----~~---r~~~~~~N~~i~~~i~~~i~~~~-----p~a~viv~tN  159 (353)
                            -+-|++|..+|...  ..+    .+   ....+..|+.....+++.+..+-     +.+.|++++.
T Consensus        85 ~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS  156 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             hhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccc
Confidence                  13456777776532  111    22   23345667666555555554432     2356666653

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=94.71  E-value=0.034  Score=45.02  Aligned_cols=66  Identities=21%  Similarity=0.411  Sum_probs=44.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +++||+|+|. |.+|+..+..+.+.+-+.-+.++|.+...         ........   ..+.++...+.|+|+++..
T Consensus         2 ~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~---------~~~~~~~~---~~~~~~~~~~~D~Vvi~tp   67 (170)
T d1f06a1           2 TNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATL---------DTKTPVFD---VADVDKHADDVDVLFLCMG   67 (170)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCC---------SSSSCEEE---GGGGGGTTTTCSEEEECSC
T ss_pred             CcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccccc---------cccccccc---chhhhhhccccceEEEeCC
Confidence            4579999998 99999999888876544334567765411         11122332   2456677899999999753

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.70  E-value=0.12  Score=37.85  Aligned_cols=74  Identities=18%  Similarity=0.303  Sum_probs=51.7

Q ss_pred             CCCCCCeEEEEcCCCCcH-HHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           37 GGAAGFKVAILGAAGGIG-QPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG-~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      +....+||-+||. |-+| +++|..|+..|+  +|.-.|.... ....+|.+..  ..+..  +. + ++.++++|+||.
T Consensus         4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~--~VsGSD~~~~-~~~~~L~~~G--i~v~~--g~-~-~~~i~~~d~vV~   73 (96)
T d1p3da1           4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGY--QISGSDIADG-VVTQRLAQAG--AKIYI--GH-A-EEHIEGASVVVV   73 (96)
T ss_dssp             CCTTCCEEEEETT-TSTTHHHHHHHHHHHTC--EEEEEESCCS-HHHHHHHHTT--CEEEE--SC-C-GGGGTTCSEEEE
T ss_pred             cchhCCEEEEEEE-CHHHHHHHHHHHHhCCC--EEEEEeCCCC-hhhhHHHHCC--CeEEE--CC-c-cccCCCCCEEEE
Confidence            3455679999999 6677 667899999999  9999998752 2223455432  33332  22 3 356899999999


Q ss_pred             cCCCC
Q 018618          116 PAGVP  120 (353)
Q Consensus       116 ~ag~~  120 (353)
                      +.+.+
T Consensus        74 S~AI~   78 (96)
T d1p3da1          74 SSAIK   78 (96)
T ss_dssp             CTTSC
T ss_pred             CCCcC
Confidence            98776

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=94.67  E-value=0.089  Score=42.64  Aligned_cols=75  Identities=20%  Similarity=0.204  Sum_probs=47.0

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhh---hh------C
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLEN---AL------T  108 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~---al------~  108 (353)
                      ++..+|.|+|| |.+|...+..+...|. ..|+.+|.++ ....+.++.     .....-...++..+   ++      .
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga-~~Vi~~~~~~~~~~~a~~lG-----a~~vi~~~~~~~~~~~~~i~~~~~~~   99 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGA-ENVIVIAGSPNRLKLAEEIG-----ADLTLNRRETSVEERRKAIMDITHGR   99 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTB-SEEEEEESCHHHHHHHHHTT-----CSEEEETTTSCHHHHHHHHHHHTTTS
T ss_pred             CCCCEEEEECC-Cccchhheeccccccc-cccccccccccccccccccc-----ceEEEeccccchHHHHHHHHHhhCCC
Confidence            34569999998 9999998888888775 3899999976 223333332     11111111223221   11      3


Q ss_pred             CCcEEEEcCCCC
Q 018618          109 GMDLVIIPAGVP  120 (353)
Q Consensus       109 ~ADiVIi~ag~~  120 (353)
                      ++|+||.+.|.+
T Consensus       100 g~Dvvid~vG~~  111 (182)
T d1vj0a2         100 GADFILEATGDS  111 (182)
T ss_dssp             CEEEEEECSSCT
T ss_pred             CceEEeecCCch
Confidence            689999998754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=94.66  E-value=0.014  Score=52.23  Aligned_cols=39  Identities=23%  Similarity=0.290  Sum_probs=33.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHH
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVT   82 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~   82 (353)
                      ++||+|||| |..|.+.|..|++.|.  +|.+++.++ .-|.+
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~--~V~viEk~~~iGG~~   41 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGH--QVHIIDQRDHIGGNS   41 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTC--EEEEEESSSSSSGGG
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCC--CEEEEECCCCCcCee
Confidence            469999999 9999999999999887  999999887 44443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.63  E-value=0.37  Score=40.61  Aligned_cols=153  Identities=12%  Similarity=0.096  Sum_probs=82.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCc----------hhhhhCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ----------LENALTG  109 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d----------~~~al~~  109 (353)
                      +.+.|+||++-+|..++..|++.|.  +|++.|+++  ++..+.++....  .....  ...+          .......
T Consensus         6 KvalITGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           6 LVAVITGGASGLGLATAERLVGQGA--SAVLLDLPNSGGEAQAKKLGNNC--VFAPA--DVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECTTSSHHHHHHHHCTTE--EEEEC--CTTCHHHHHHHHHHHHHHHSC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHhCCCc--ccccc--ccccccccccccccccccccc
Confidence            3567889999999999999999998  999999987  444444453321  01111  0111          1233456


Q ss_pred             CcEEEEcCCCCCC-------CC--C---CHHHHHHHHHHHHH----HHHHHHHhhC-----CCcEEEEecCCCCchhHHH
Q 018618          110 MDLVIIPAGVPRK-------PG--M---TRDDLFNINAGIVR----TLCEGIAKCC-----PNATVNLISNPVNSTVPIA  168 (353)
Q Consensus       110 ADiVIi~ag~~~~-------~g--~---~r~~~~~~N~~i~~----~i~~~i~~~~-----p~a~viv~tNPv~~~t~~~  168 (353)
                      -|+.+..++....       +.  .   .....+..|+....    .+.+.+....     ..+.||++|....      
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~------  153 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA------  153 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH------
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh------
Confidence            7888876543211       11  1   12234455654444    4444443332     3456777664321      


Q ss_pred             HHHHHHhCCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          169 AEVFKKAGTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       169 ~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                           .. +.|..=.++.+.-.-..|-+.+|+.++  +..|++-.+
T Consensus       154 -----~~-~~~~~~~Y~asKaal~~lt~~la~e~~--~~gIrvN~I  191 (248)
T d2o23a1         154 -----FE-GQVGQAAYSASKGGIVGMTLPIARDLA--PIGIRVMTI  191 (248)
T ss_dssp             -----HH-CCTTCHHHHHHHHHHHHHHHHHHHHHG--GGTEEEEEE
T ss_pred             -----cc-CCCCchHHHHHHHHHHHHHHHHHHHhc--ccCcceeee
Confidence                 11 233323344443334457788888874  455654444

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.63  E-value=0.014  Score=49.69  Aligned_cols=33  Identities=30%  Similarity=0.475  Sum_probs=30.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +||+|||| |..|.+.|..|++.|+  +|+++|..+
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~--~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGL--NVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSC--EEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCC--CEEEEeCCC
Confidence            49999999 9999999999999998  999999764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.62  E-value=0.015  Score=49.73  Aligned_cols=35  Identities=20%  Similarity=0.227  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |+||+|||| |..|.++|..|.+.|+. .|.+++...
T Consensus         1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~-~V~V~Er~~   35 (288)
T d3c96a1           1 PIDILIAGA-GIGGLSCALALHQAGIG-KVTLLESSS   35 (288)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCS-EEEEEESSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCC-eEEEEeCCC
Confidence            689999999 99999999999999842 788999865

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.59  E-value=0.028  Score=47.04  Aligned_cols=62  Identities=19%  Similarity=0.307  Sum_probs=46.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      .++|+|+|. |.+|+.+|..+..-|.  +|..||........   .+ ..        ...++++.++.||+|++..
T Consensus        43 gk~vgIiG~-G~IG~~va~~l~~fg~--~V~~~d~~~~~~~~---~~-~~--------~~~~l~~~l~~sDii~~~~  104 (197)
T d1j4aa1          43 DQVVGVVGT-GHIGQVFMQIMEGFGA--KVITYDIFRNPELE---KK-GY--------YVDSLDDLYKQADVISLHV  104 (197)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCHHHH---HT-TC--------BCSCHHHHHHHCSEEEECS
T ss_pred             CCeEEEecc-cccchhHHHhHhhhcc--cccccCcccccccc---cc-ee--------eeccccccccccccccccC
Confidence            359999999 9999999999987777  99999976532111   11 11        1235788999999999975

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.59  E-value=0.011  Score=48.17  Aligned_cols=35  Identities=20%  Similarity=0.283  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +.||+|||| |..|...|..|.+.|+- +|.++|..+
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~-~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYS-DITIFEKQE   38 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCC-CEEEEESSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCC-eEEEEEecC
Confidence            349999999 99999999999999872 589999876

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.54  E-value=0.013  Score=48.26  Aligned_cols=35  Identities=17%  Similarity=0.135  Sum_probs=30.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |||+|||| |++|..+|..|...+...+|.+++.++
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            89999999 999999999998765555999998754

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=94.53  E-value=0.063  Score=43.60  Aligned_cols=101  Identities=14%  Similarity=0.164  Sum_probs=60.8

Q ss_pred             cccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhh-----
Q 018618           34 RAKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENAL-----  107 (353)
Q Consensus        34 ~~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-----  107 (353)
                      +..+-++..+|+|+|+ |.||...+..+...|. ..|+.+|.++ ....+.++.-    ..+-.. ...++.+.+     
T Consensus        21 ~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga-~~Vi~~d~~~~r~~~a~~lGa----~~~i~~-~~~~~~~~v~~~t~   93 (174)
T d1jqba2          21 ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGA-GRIIGVGSRPICVEAAKFYGA----TDILNY-KNGHIEDQVMKLTN   93 (174)
T ss_dssp             HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTC-SCEEEECCCHHHHHHHHHHTC----SEEECG-GGSCHHHHHHHHTT
T ss_pred             HHhCCCCCCEEEEEcC-Ccchhhhhhhhhcccc-cccccccchhhhHHHHHhhCc----cccccc-cchhHHHHHHHHhh
Confidence            3345566779999998 9999998888887764 3689999876 2333443331    111111 122333332     


Q ss_pred             -CCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          108 -TGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       108 -~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                       +++|+||.+.|.+.               .+.+.   ++-..|++.+++++.
T Consensus        94 g~G~D~vid~~g~~~---------------~~~~a---~~~~~~~G~iv~~G~  128 (174)
T d1jqba2          94 GKGVDRVIMAGGGSE---------------TLSQA---VKMVKPGGIISNINY  128 (174)
T ss_dssp             TSCEEEEEECSSCTT---------------HHHHH---HHHEEEEEEEEECCC
T ss_pred             ccCcceEEEccCCHH---------------HHHHH---HHHHhcCCEEEEEee
Confidence             46999999987541               01122   222348888888763

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=94.52  E-value=0.047  Score=44.64  Aligned_cols=76  Identities=21%  Similarity=0.252  Sum_probs=49.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHH----HHHHHhcCCCCCeEEEEeC--CCchhhhhCCCcE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPG----VTADISHMDTGAVVRGFLG--QPQLENALTGMDL  112 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~----~~~dl~~~~~~~~v~~~~~--t~d~~~al~~ADi  112 (353)
                      +..+|.|+|+ |-+|.+++..|...+. .+|++++++. ...    .+.++... ....+....-  ..++.+.+..+|+
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~-~~i~i~nR~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~di   93 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGL-KEIKLFNRRDEFFDKALAFAQRVNEN-TDCVVTVTDLADQQAFAEALASADI   93 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEECSSTTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHHTCSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCC-ceEeeeccchHHHHHHHHHHHHHHhh-cCcceEeeecccccchhhhhcccce
Confidence            3469999999 8899999999988875 5999999876 111    22233321 1122332211  1234566789999


Q ss_pred             EEEcCC
Q 018618          113 VIIPAG  118 (353)
Q Consensus       113 VIi~ag  118 (353)
                      ||.+..
T Consensus        94 iIN~Tp   99 (182)
T d1vi2a1          94 LTNGTK   99 (182)
T ss_dssp             EEECSS
T ss_pred             eccccC
Confidence            999853

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=94.49  E-value=0.036  Score=46.24  Aligned_cols=88  Identities=15%  Similarity=0.241  Sum_probs=55.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeC---------------------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLG---------------------   99 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~---------------------   99 (353)
                      +||.|||. |..|.+++..+...++ ..+.+.+|.+.     .+|.+.....++..  +                     
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----~~L~~~~a~~ki~i--G~~~t~G~G~g~~p~~g~~aa~   72 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDL-----QVLEASNADVKIQI--GENITRGLGAGGRPEIGEQAAL   72 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCH-----HHHHTCCCSEEEEC--CTTTTTTSCCTTCHHHHHHHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCH-----HHHhcCCcceEEec--ccccCCCcccccCchhhHhHHH
Confidence            58999999 9999999988877664 35888899764     23343322111211  1                     


Q ss_pred             --CCchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          100 --QPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG  144 (353)
Q Consensus       100 --t~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~  144 (353)
                        .....+.+.++|+||+++|..-..|       .--.+++.++++.
T Consensus        73 e~~~~I~~~l~~~d~vfi~AGlGGgTG-------tgaapviA~~ake  112 (194)
T d1w5fa1          73 ESEEKIREVLQDTHMVFITAGFGGGTG-------TGASPVIAKIAKE  112 (194)
T ss_dssp             HTHHHHHHHTTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCeEEEEEecCCCcc-------cchHHHHHHHHHH
Confidence              1134567899999999887653222       2334555555554

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=94.48  E-value=0.094  Score=42.58  Aligned_cols=70  Identities=16%  Similarity=0.146  Sum_probs=41.4

Q ss_pred             CCCeEEEEcCCCCcHHHH-HHHHHhCCCCcEEE-EEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEEEE
Q 018618           40 AGFKVAILGAAGGIGQPL-AMLMKINPLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALT--GMDLVII  115 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~l-a~~l~~~~~~~el~-L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiVIi  115 (353)
                      +++||+|||+ |.+|... +..+...+...+|+ ++|.+.....  .+.+.-  .....+   +|+++.++  +.|+|++
T Consensus         2 kkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~--~~~~~~--~~~~~~---~~~~ell~~~~id~v~I   73 (181)
T d1zh8a1           2 RKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAE--EFAKMV--GNPAVF---DSYEELLESGLVDAVDL   73 (181)
T ss_dssp             CCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHH--HHHHHH--SSCEEE---SCHHHHHHSSCCSEEEE
T ss_pred             CCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhh--hhhccc--ccccee---eeeeccccccccceeec
Confidence            4579999998 9999864 66666544323555 7788652221  121110  111222   46777764  5788988


Q ss_pred             cC
Q 018618          116 PA  117 (353)
Q Consensus       116 ~a  117 (353)
                      +.
T Consensus        74 ~t   75 (181)
T d1zh8a1          74 TL   75 (181)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=94.43  E-value=0.021  Score=47.13  Aligned_cols=36  Identities=22%  Similarity=0.330  Sum_probs=32.5

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ..+.||+|||| |..|...|..|.+.|+  ++.|+|..+
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~--~Vtl~E~~~   76 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGH--QVTLFDAHS   76 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTC--EEEEEESSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhcc--ceEEEeccC
Confidence            34569999999 9999999999999999  999999875

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=94.28  E-value=0.069  Score=43.10  Aligned_cols=69  Identities=14%  Similarity=0.278  Sum_probs=46.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH--HHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP--GVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~--~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +.++|.|+|| |-.+.++++.|...|.  +|.+++++..+  ..+..+.+.   ..+...  +.+ +.....+|+||.+.
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~--~i~I~nRt~~ka~~l~~~~~~~---~~~~~~--~~~-~~~~~~~dliIN~T   87 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDC--AVTITNRTVSRAEELAKLFAHT---GSIQAL--SMD-ELEGHEFDLIINAT   87 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHTGGG---SSEEEC--CSG-GGTTCCCSEEEECC
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccce--EEEeccchHHHHHHHHHHHhhc---cccccc--ccc-cccccccceeeccc
Confidence            4569999999 8899999999998886  79999987532  222222221   233332  222 23357899999974

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.18  E-value=0.12  Score=42.48  Aligned_cols=94  Identities=23%  Similarity=0.302  Sum_probs=61.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|+|. |.+|..++..+..-|.  ++..+|.....         .......    ..++++.++.||+|++.....
T Consensus        44 ~~~vgiiG~-G~IG~~va~~l~~fg~--~v~~~d~~~~~---------~~~~~~~----~~~l~ell~~sDii~i~~plt  107 (188)
T d1sc6a1          44 GKKLGIIGY-GHIGTQLGILAESLGM--YVYFYDIENKL---------PLGNATQ----VQHLSDLLNMSDVVSLHVPEN  107 (188)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSCCC---------CCTTCEE----CSCHHHHHHHCSEEEECCCSS
T ss_pred             ceEEEEeec-ccchhhhhhhcccccc--eEeeccccccc---------hhhhhhh----hhhHHHHHhhccceeecccCC
Confidence            469999999 9999999998887777  99999975410         0001111    136789999999999975422


Q ss_pred             -CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec--CCCCch
Q 018618          121 -RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS--NPVNST  164 (353)
Q Consensus       121 -~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t--NPv~~~  164 (353)
                       ...++-..              +.+....+++++|+++  +=+|.-
T Consensus       108 ~~T~~li~~--------------~~l~~mk~~a~lIN~aRG~lvde~  140 (188)
T d1sc6a1         108 PSTKNMMGA--------------KEISLMKPGSLLINASRGTVVDIP  140 (188)
T ss_dssp             TTTTTCBCH--------------HHHHHSCTTEEEEECSCSSSBCHH
T ss_pred             cchhhhccH--------------HHHhhCCCCCEEEEcCcHHhhhhH
Confidence             22232111              2233445789999997  335543

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=94.14  E-value=0.019  Score=45.68  Aligned_cols=35  Identities=23%  Similarity=0.262  Sum_probs=30.5

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +||+|||| |++|..+|..|...+.-.+|.|+|.++
T Consensus         3 krivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           3 RKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            49999999 999999999998876545999999876

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.07  E-value=0.028  Score=42.48  Aligned_cols=34  Identities=15%  Similarity=0.166  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |.||+|||| |++|.-+|..+...|.  ++.+++..+
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~--~Vtlve~~~   55 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGT--KVTILEGAG   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             CCeEEEECC-Cccceeeeeeeccccc--EEEEEEecc
Confidence            579999999 9999999999998887  999999766

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=94.04  E-value=0.2  Score=42.59  Aligned_cols=118  Identities=16%  Similarity=0.103  Sum_probs=70.0

Q ss_pred             CCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-----cHHHHHHHhcCCCCCeEEEEeC-CCch---hhh-
Q 018618           37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-----TPGVTADISHMDTGAVVRGFLG-QPQL---ENA-  106 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-----~~~~~~dl~~~~~~~~v~~~~~-t~d~---~~a-  106 (353)
                      .|.+...|.|+||+|-+|..++..|++.|. ..|+|+.++.     ......++...  ...+..+.. -+|.   ++. 
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga-~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~   81 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGA-PHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELL   81 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTC-SEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCC-CEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhh
Confidence            467777899999999999999999999886 3688887643     23334445432  234443221 1221   111 


Q ss_pred             --h---CCCcEEEEcCCCCCCCC---CCHH---HHHHHHHHHHHHHHHHHHhhCCCcEEEEec
Q 018618          107 --L---TGMDLVIIPAGVPRKPG---MTRD---DLFNINAGIVRTLCEGIAKCCPNATVNLIS  158 (353)
Q Consensus       107 --l---~~ADiVIi~ag~~~~~g---~~r~---~~~~~N~~i~~~i~~~i~~~~p~a~viv~t  158 (353)
                        +   -.-|.||+.+|......   ++..   ..+.-|+.....+.+.+... +.+.++++|
T Consensus        82 ~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~-~~~~iv~~S  143 (259)
T d2fr1a1          82 GGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTREL-DLTAFVLFS  143 (259)
T ss_dssp             HTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS-CCSEEEEEE
T ss_pred             ccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhcc-CCceEeeec
Confidence              1   24677888887653321   2222   23456777777777666544 344555544

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.02  E-value=0.028  Score=42.56  Aligned_cols=34  Identities=29%  Similarity=0.419  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |.||+|||| |++|.-+|..|...|.  ++.+++..+
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~--~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGA--KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhcccc--EEEEEeecc
Confidence            569999999 9999999999998887  999999866

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.01  E-value=0.032  Score=42.78  Aligned_cols=35  Identities=20%  Similarity=0.269  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +..+|+|+|| |++|.-+|..|.+.|.  ++.+++..+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~--~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGK--KVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccce--EEEEEEecC
Confidence            3459999999 9999999999999988  999998765

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.84  E-value=0.036  Score=42.44  Aligned_cols=34  Identities=24%  Similarity=0.322  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ..+|+|||| |++|.-+|..|.+.|.  ++.+++..+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~--~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGV--HVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccc--eEEEEeecc
Confidence            459999999 9999999999999987  999999876

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.82  E-value=0.033  Score=42.39  Aligned_cols=34  Identities=24%  Similarity=0.254  Sum_probs=30.5

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +.||+|||| |++|.-+|..|...|.  ++.|++..+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~--~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGI--DSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTC--EEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccc--cceeeehhc
Confidence            569999999 9999999999998777  999999755

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.77  E-value=0.013  Score=52.26  Aligned_cols=107  Identities=21%  Similarity=0.228  Sum_probs=65.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHh----CCC-----CcEEEEEeCCC--cHHHHHHHhcC-CCCCeEEEEeCCCchhhhhC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKI----NPL-----VSVLHLYDVVN--TPGVTADISHM-DTGAVVRGFLGQPQLENALT  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~----~~~-----~~el~L~D~~~--~~~~~~dl~~~-~~~~~v~~~~~t~d~~~al~  108 (353)
                      ..||+|.|| |..|..++..|..    .|+     .+.++++|...  .++..-++... .....-.......+++++++
T Consensus        25 d~kiv~~GA-GsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~~k~~~a~~~~~~~~~~L~e~i~  103 (294)
T d1pj3a1          25 EHKILFLGA-GEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDAVN  103 (294)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHHHH
T ss_pred             HcEEEEECc-cHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHHHHHHhhccccccchhHHHHHHH
Confidence            459999999 9999998876543    343     25799999865  12211111111 00011000011245777765


Q ss_pred             --CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          109 --GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       109 --~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                        ++|++|-+.+.+   |.-           .+++.+.|.+.+++.+|+-.|||..
T Consensus       104 ~~kptvliG~S~~~---g~f-----------t~evi~~Ma~~~~~PIIFaLSNPt~  145 (294)
T d1pj3a1         104 ILKPSTIIGVAGAG---RLF-----------TPDVIRAMASINERPVIFALSNPTA  145 (294)
T ss_dssp             HHCCSEEEECCCSS---CCS-----------CHHHHHHHHHHCSSCEEEECCSSGG
T ss_pred             hcCCceEEEecCCC---CcC-----------CHHHHHHHHhcCCCcEEEEccCCCC
Confidence              888888876544   211           2467777888999999999999974

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.76  E-value=0.02  Score=49.17  Aligned_cols=32  Identities=19%  Similarity=0.361  Sum_probs=29.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .|+|||| |-+|.++|+.|++.|.  +|+++|.++
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~--~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENK--NTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--cEEEEeCCC
Confidence            4999999 9999999999999997  999999865

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=93.69  E-value=0.7  Score=38.85  Aligned_cols=75  Identities=16%  Similarity=0.143  Sum_probs=47.6

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeCC---Cc-----------hhhh
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLGQ---PQ-----------LENA  106 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~t---~d-----------~~~a  106 (353)
                      ..|+||++-+|..++..|++.|.  +|++.|++.   .+..+.++...............   .+           ..+.
T Consensus         4 AlVTGas~GIG~aia~~la~~G~--~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           4 AVITGGARRIGHSIAVRLHQQGF--RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            46889989999999999999998  999999886   23334444433211111111000   11           1123


Q ss_pred             hCCCcEEEEcCCCC
Q 018618          107 LTGMDLVIIPAGVP  120 (353)
Q Consensus       107 l~~ADiVIi~ag~~  120 (353)
                      +..-|++|..+|..
T Consensus        82 ~g~iDilvnnAG~~   95 (266)
T d1mxha_          82 FGRCDVLVNNASAY   95 (266)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             hCCCCEEEECCccC
Confidence            46799999998864

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.69  E-value=0.16  Score=43.99  Aligned_cols=115  Identities=17%  Similarity=0.172  Sum_probs=68.5

Q ss_pred             CeEE-EEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCc----------hhhhh
Q 018618           42 FKVA-ILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQ----------LENAL  107 (353)
Q Consensus        42 ~KI~-IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d----------~~~al  107 (353)
                      ++|+ |+||++-+|..+|..|++. +.  .|++.+++.  .+..+.+|............ .-+|          ..+.+
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~--~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~-Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAEGLSPRFHQL-DIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHTTCCCEEEEC-CTTCHHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhcCCcEEEEEE-ecCCHHHHHHHHHHHHHhc
Confidence            4775 6699899999999988864 66  899999987  34444555543211111111 1122          22334


Q ss_pred             CCCcEEEEcCCCCCC-CC--CCH---HHHHHHHHHHHHHHHHHHHhhC-CCcEEEEecC
Q 018618          108 TGMDLVIIPAGVPRK-PG--MTR---DDLFNINAGIVRTLCEGIAKCC-PNATVNLISN  159 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~-~g--~~r---~~~~~~N~~i~~~i~~~i~~~~-p~a~viv~tN  159 (353)
                      ..-|++|..||.... +.  .+.   ...+..|+-....+++.+-..- +.+.+|+++.
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            689999999986432 11  122   2345567666666666655432 3567777764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.60  E-value=0.037  Score=43.03  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=31.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +.||+|||| |++|.-+|..|...|.  ++.+++..+
T Consensus        35 ~k~v~VIGg-G~iG~E~A~~l~~~g~--~Vtvie~~~   68 (133)
T d1q1ra2          35 DNRLVVIGG-GYIGLEVAATAIKANM--HVTLLDTAA   68 (133)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhhCc--ceeeeeecc
Confidence            459999999 9999999999999888  999999865

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.51  E-value=0.044  Score=41.90  Aligned_cols=35  Identities=14%  Similarity=0.186  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .|.|++|||| |.+|.-+|..|...|.  ++.+++..+
T Consensus        22 ~p~~~vIiG~-G~ig~E~A~~l~~lG~--~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGG-GIIGLEMGSVYSRLGS--KVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCCeEEEECC-CchHHHHHHHHHhhCc--ceeEEEecc
Confidence            3569999999 9999999999998887  999999866

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.48  E-value=0.033  Score=47.70  Aligned_cols=34  Identities=24%  Similarity=0.246  Sum_probs=30.9

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ..||+|||| |.-|.+.|..|.+.|+  +|.+++.++
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~--~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGM--DVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCC--CEEEEeCCC
Confidence            459999999 9999999999999998  999999765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=93.39  E-value=0.035  Score=49.53  Aligned_cols=35  Identities=26%  Similarity=0.325  Sum_probs=31.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +||+|||| |..|.+.|..|++.+...++++++.+.
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            48999999 999999999888877666999999875

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.35  E-value=0.078  Score=44.63  Aligned_cols=71  Identities=17%  Similarity=0.323  Sum_probs=47.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCC--------------------
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQ--------------------  100 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t--------------------  100 (353)
                      .||.|||. |.-|..++..+...++ ..+.+.+|.+.     .+|.+.....++..  +.                    
T Consensus        16 ~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----~~L~~~~~~~ki~i--g~~~t~g~Gag~~p~~g~~aa~   87 (209)
T d2vapa1          16 AKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDA-----QQLIRTKADKKILI--GKKLTRGLGAGGNPKIGEEAAK   87 (209)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBH-----HHHHTSCCSEEEEC--CTTTTTTBCCTTCHHHHHHHHH
T ss_pred             CcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCH-----HHHhcCCcchhccc--ccccccccccccchHHHHHHHH
Confidence            39999999 9999999998887764 35888889864     23343321111111  10                    


Q ss_pred             ---CchhhhhCCCcEEEEcCCCC
Q 018618          101 ---PQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus       101 ---~d~~~al~~ADiVIi~ag~~  120 (353)
                         ....+.++++|.||+++|..
T Consensus        88 e~~~~I~~~l~~~d~vfi~AGlG  110 (209)
T d2vapa1          88 ESAEEIKAAIQDSDMVFITCGLG  110 (209)
T ss_dssp             HTHHHHHHHHTTCSEEEEEEETT
T ss_pred             HHHHHHHHhccCCCEEEEEEeCC
Confidence               13456688899999988765

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=93.31  E-value=0.1  Score=42.04  Aligned_cols=67  Identities=15%  Similarity=0.213  Sum_probs=43.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      +..||.|+|+ |-++.++++.|.+.|. .+|.+++++..++.  .|.+..  . ....   ..  ....++|+||.+..
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~-~~I~I~nR~~~ka~--~L~~~~--~-~~~~---~~--~~~~~~DliINaTp   82 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGF-EKLKIYARNVKTGQ--YLAALY--G-YAYI---NS--LENQQADILVNVTS   82 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTC-CCEEEECSCHHHHH--HHHHHH--T-CEEE---SC--CTTCCCSEEEECSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCC-CEEEEecccHHHHH--HHHHhh--h-hhhh---hc--ccccchhhheeccc
Confidence            4569999999 9999999999998875 48999998753222  222111  0 1111   11  12368999999743

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.19  E-value=0.034  Score=39.37  Aligned_cols=33  Identities=18%  Similarity=0.209  Sum_probs=29.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ++|+|+|+ |+.|+-++.....-|+  +++.+|.+.
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~--~v~vldp~~   34 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGI--AVWPVGLDA   34 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTE--EEEEECTTS
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCC--EEEEEcCCC
Confidence            48999999 9999999988887787  999999865

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=93.19  E-value=0.21  Score=42.29  Aligned_cols=102  Identities=21%  Similarity=0.222  Sum_probs=67.5

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC----------cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN----------TPGVTADISHMDTGAVVRGFLGQPQLENALTG  109 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~----------~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~  109 (353)
                      +..||.+.|| |..|..++..|...+. ++++++|.+.          ......++.+......     ...++++++++
T Consensus        25 ~d~riv~~GA-GsAg~gia~~l~~~~~-~~i~~~D~~GLi~~~r~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~l~g   97 (222)
T d1vl6a1          25 EEVKVVVNGI-GAAGYNIVKFLLDLGV-KNVVAVDRKGILNENDPETCLNEYHLEIARITNPER-----LSGDLETALEG   97 (222)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTC-CEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTTC-----CCSCHHHHHTT
T ss_pred             hhcEEEEECh-HHHHHHHHHHHHHhcc-cceEeecceeEEEcCcccccccHHHHHHHhhhcchh-----hhcchHhhccC
Confidence            3569999999 9999999998887764 5999999864          1112222332211111     12467889999


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhH
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVP  166 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~  166 (353)
                      +++++-+..    +|.-+.              +.|.+.++..+|+-.|||..-...
T Consensus        98 ~~~~~g~~~----~~~~~~--------------e~m~~~~~rPIIFpLSNPt~~~e~  136 (222)
T d1vl6a1          98 ADFFIGVSR----GNILKP--------------EWIKKMSRKPVIFALANPVPEIDP  136 (222)
T ss_dssp             CSEEEECSC----SSCSCH--------------HHHTTSCSSCEEEECCSSSCSSCH
T ss_pred             cceeccccc----cccccH--------------HHHhhcCCCCEEEecCCCccchhh
Confidence            998777642    222111              246677888999999999875543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=93.19  E-value=0.12  Score=41.79  Aligned_cols=70  Identities=20%  Similarity=0.212  Sum_probs=47.6

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      +..+|.|+|+ |-++.++++.|.+.+  .+|.+++++.  ++..+..+...   ..+....  .+ ...+.++|+||.+.
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~--~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~--~~-~~~~~~~diiIN~t   87 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQ--QNIVLANRTFSKTKELAERFQPY---GNIQAVS--MD-SIPLQTYDLVINAT   87 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTT--CEEEEEESSHHHHHHHHHHHGGG---SCEEEEE--GG-GCCCSCCSEEEECC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccC--ceeeeccchHHHHHHHHHHHhhc---cccchhh--hc-cccccccceeeecc
Confidence            4568999999 889999999888754  4999999876  33344444432   2333321  12 24578999999985


Q ss_pred             C
Q 018618          118 G  118 (353)
Q Consensus       118 g  118 (353)
                      .
T Consensus        88 p   88 (171)
T d1p77a1          88 S   88 (171)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.09  E-value=0.075  Score=42.88  Aligned_cols=67  Identities=24%  Similarity=0.204  Sum_probs=50.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++++|+|= |.+|..+|..+...|.  .+..+++++.+++..   ++.. -.+      ...+++++.+|+||.+.|..
T Consensus        23 Gk~vvV~GY-G~vGrG~A~~~rg~Ga--~V~V~E~DPi~alqA---~mdG-f~v------~~~~~a~~~aDi~vTaTGn~   89 (163)
T d1v8ba1          23 GKIVVICGY-GDVGKGCASSMKGLGA--RVYITEIDPICAIQA---VMEG-FNV------VTLDEIVDKGDFFITCTGNV   89 (163)
T ss_dssp             TSEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSCHHHHHHH---HTTT-CEE------CCHHHHTTTCSEEEECCSSS
T ss_pred             CCEEEEecc-cccchhHHHHHHhCCC--EEEEEecCchhhHHH---HhcC-Ccc------CchhHccccCcEEEEcCCCC
Confidence            458999999 9999999999998887  999999988443321   1221 111      24679999999999987644

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=93.04  E-value=0.16  Score=40.82  Aligned_cols=98  Identities=15%  Similarity=0.249  Sum_probs=58.9

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhh-----CCCc
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENAL-----TGMD  111 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-----~~AD  111 (353)
                      -++..+|.|+|+ |.+|...+..+...|. ..++..|.++ ....+.++--    ..+-.. ...|+.+.+     .++|
T Consensus        26 ~~~g~~VlI~G~-G~iG~~~~~~ak~~g~-~~v~~~~~~~~k~~~a~~~Ga----~~~i~~-~~~~~~~~i~~~t~gg~D   98 (174)
T d1f8fa2          26 VTPASSFVTWGA-GAVGLSALLAAKVCGA-SIIIAVDIVESRLELAKQLGA----THVINS-KTQDPVAAIKEITDGGVN   98 (174)
T ss_dssp             CCTTCEEEEESC-SHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHHHTC----SEEEET-TTSCHHHHHHHHTTSCEE
T ss_pred             CCCCCEEEEeCC-CHHHhhhhhccccccc-ceeeeeccHHHHHHHHHHcCC----eEEEeC-CCcCHHHHHHHHcCCCCc
Confidence            455678999998 9999999988877775 2677888876 2333444421    122111 234444433     2489


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          112 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      +||.+.|.+               ..+.+.   ++-..|.+.+++++.|
T Consensus        99 ~vid~~G~~---------------~~~~~~---~~~~~~~G~i~~~G~~  129 (174)
T d1f8fa2          99 FALESTGSP---------------EILKQG---VDALGILGKIAVVGAP  129 (174)
T ss_dssp             EEEECSCCH---------------HHHHHH---HHTEEEEEEEEECCCC
T ss_pred             EEEEcCCcH---------------HHHHHH---HhcccCceEEEEEeec
Confidence            999987633               011111   2223478888887644

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.90  E-value=0.39  Score=37.72  Aligned_cols=120  Identities=16%  Similarity=0.165  Sum_probs=66.3

Q ss_pred             CCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchh----hhhCCCc
Q 018618           37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLE----NALTGMD  111 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~----~al~~AD  111 (353)
                      +..+..+|+|.|+ |.+|...+..+...|.  +++.+|.++. ...+.++   .  ...-......|+.    +...+.|
T Consensus        24 ~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~--~v~~~~~~~~r~~~~k~~---G--a~~~~~~~~~~~~~~~~~~~~~~~   95 (168)
T d1rjwa2          24 GAKPGEWVAIYGI-GGLGHVAVQYAKAMGL--NVVAVDIGDEKLELAKEL---G--ADLVVNPLKEDAAKFMKEKVGGVH   95 (168)
T ss_dssp             TCCTTCEEEEECC-STTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHT---T--CSEEECTTTSCHHHHHHHHHSSEE
T ss_pred             CCCCCCEEEEeec-ccchhhhhHHHhcCCC--eEeccCCCHHHhhhhhhc---C--cceecccccchhhhhcccccCCCc
Confidence            3445679999998 9999998888888787  8899998662 2222222   1  1211111223332    2246678


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeec
Q 018618          112 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVT  187 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t  187 (353)
                      .+|++++.+               ..+..   .++...|++.+++++.|.+....-...++.     ...+++|..
T Consensus        96 ~~v~~~~~~---------------~~~~~---a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~-----~~~~i~gs~  148 (168)
T d1rjwa2          96 AAVVTAVSK---------------PAFQS---AYNSIRRGGACVLVGLPPEEMPIPIFDTVL-----NGIKIIGSI  148 (168)
T ss_dssp             EEEESSCCH---------------HHHHH---HHHHEEEEEEEEECCCCSSEEEEEHHHHHH-----TTCEEEECC
T ss_pred             eEEeecCCH---------------HHHHH---HHHHhccCCceEecccccCCCCCCHHHHHH-----CCcEEEEEe
Confidence            788775422               11222   222234889888887654433211122222     234788873

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.90  E-value=0.11  Score=40.74  Aligned_cols=33  Identities=15%  Similarity=0.197  Sum_probs=28.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   76 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~   76 (353)
                      .++|.|||| |.+|..-+..|+..|-  +|++++..
T Consensus        13 gkrvLViGg-G~va~~ka~~Ll~~GA--~VtVvap~   45 (150)
T d1kyqa1          13 DKRILLIGG-GEVGLTRLYKLMPTGC--KLTLVSPD   45 (150)
T ss_dssp             TCEEEEEEE-SHHHHHHHHHHGGGTC--EEEEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCC--EEEEEeCC
Confidence            458999999 9999999999999887  88999653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.89  E-value=0.043  Score=41.34  Aligned_cols=34  Identities=15%  Similarity=0.240  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |.|++|+|| |++|.-+|..|...|.  ++.+++..+
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~--~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGA--QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhccc--ceEEEeeec
Confidence            469999999 9999999999998887  999999865

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.87  E-value=0.49  Score=39.90  Aligned_cols=35  Identities=20%  Similarity=0.124  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHh---CCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKI---NPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~---~~~~~el~L~D~~~   77 (353)
                      +++|.|+||++-+|..+|..|+.   .|.  .|++.++++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~--~V~~~~r~~   39 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQ--HLFTTCRNR   39 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCS--EEEEEESCT
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCC--EEEEEECCH
Confidence            34699999999999999987764   455  899999987

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.87  E-value=0.22  Score=39.35  Aligned_cols=100  Identities=20%  Similarity=0.235  Sum_probs=59.2

Q ss_pred             CCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhh----hCCCc
Q 018618           37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENA----LTGMD  111 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~a----l~~AD  111 (353)
                      +-++..+|.|+|+ |.+|...+..++..|.  +++.+|.++ ....+.++.     .....-....|+.+.    ..+.|
T Consensus        24 ~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~--~Vi~~~~~~~~~~~a~~~G-----a~~~i~~~~~~~~~~~~~~~~g~~   95 (166)
T d1llua2          24 NARPGQWVAISGI-GGLGHVAVQYARAMGL--HVAAIDIDDAKLELARKLG-----ASLTVNARQEDPVEAIQRDIGGAH   95 (166)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHTT-----CSEEEETTTSCHHHHHHHHHSSEE
T ss_pred             CCCCCCEEEEeec-cccHHHHHHHHHHcCC--ccceecchhhHHHhhhccC-----ccccccccchhHHHHHHHhhcCCc
Confidence            4455679999998 9999999998888885  899999876 223333322     111111122343333    34566


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          112 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      .+|+..+.+               +   .+-..++-..|.+.+++++.|-+
T Consensus        96 ~~i~~~~~~---------------~---~~~~~~~~l~~~G~iv~~G~~~~  128 (166)
T d1llua2          96 GVLVTAVSN---------------S---AFGQAIGMARRGGTIALVGLPPG  128 (166)
T ss_dssp             EEEECCSCH---------------H---HHHHHHTTEEEEEEEEECCCCSS
T ss_pred             ccccccccc---------------h---HHHHHHHHhcCCcEEEEEEecCC
Confidence            677764321               0   11123333348899988876644

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.84  E-value=0.025  Score=49.03  Aligned_cols=32  Identities=28%  Similarity=0.348  Sum_probs=30.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|||| |.+|.++|..|.+.|+  ++.++|..+
T Consensus         4 ~V~IvGa-Gp~Gl~~A~~L~~~G~--~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGA-GPSGLLLGQLLHKAGI--DNVILERQT   35 (292)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTC--CEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--CEEEEeCCC
Confidence            7999999 9999999999999998  999999865

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.77  E-value=0.13  Score=41.03  Aligned_cols=72  Identities=21%  Similarity=0.257  Sum_probs=47.3

Q ss_pred             CCeEEEEcC-CCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcC--CCCCeEEEEeCCCchhhhhCCCcEEE
Q 018618           41 GFKVAILGA-AGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHM--DTGAVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa-~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      ..||+++|= ...|..+++..+..-|.  ++.++-...   ...........  .....+..+   +|+++++++||+|.
T Consensus         3 g~ki~~vGD~~nnV~~Sli~~~~~~g~--~i~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~~---~d~~~ai~~aDviy   77 (161)
T d1vlva2           3 GVKVVFMGDTRNNVATSLMIACAKMGM--NFVACGPEELKPRSDVFKRCQEIVKETDGSVSFT---SNLEEALAGADVVY   77 (161)
T ss_dssp             TCEEEEESCTTSHHHHHHHHHHHHTTC--EEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEE---SCHHHHHTTCSEEE
T ss_pred             CCEEEEEcCCccHHHHHHHHHHHHcCC--EEEEecchhhhhhhhHHHHHHHHHhhcCCceEEE---ecHHHhhhhhhhee
Confidence            469999993 24688888888877787  889888754   12211111111  112455543   67899999999999


Q ss_pred             EcC
Q 018618          115 IPA  117 (353)
Q Consensus       115 i~a  117 (353)
                      .+.
T Consensus        78 t~~   80 (161)
T d1vlva2          78 TDV   80 (161)
T ss_dssp             ECC
T ss_pred             ccc
Confidence            864

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.73  E-value=0.29  Score=39.02  Aligned_cols=72  Identities=13%  Similarity=0.111  Sum_probs=48.0

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--c-HHHH---HHHhcCCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--T-PGVT---ADISHMDTGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~-~~~~---~dl~~~~~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      +..||+++|-...|..+++..+..-|.  ++.++-...  . ....   .+..... ...+..+   .|+.+|+++||+|
T Consensus         3 ~gl~Ia~VGD~~nv~~Sli~~l~~~g~--~v~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~d~~ea~~~advi   76 (163)
T d1pvva2           3 KGVKVVYVGDGNNVAHSLMIAGTKLGA--DVVVATPEGYEPDEKVIKWAEQNAAES-GGSFELL---HDPVKAVKDADVI   76 (163)
T ss_dssp             TTCEEEEESCCCHHHHHHHHHHHHTTC--EEEEECCTTCCCCHHHHHHHHHHHHHH-TCEEEEE---SCHHHHTTTCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC--eEEEecccccCCChHHHHHHHHhhhcc-cceEEEe---cCHHHHhhhccEE
Confidence            356999999966777777777777787  899998765  1 2111   1111111 2345543   5778999999998


Q ss_pred             EEcC
Q 018618          114 IIPA  117 (353)
Q Consensus       114 Ii~a  117 (353)
                      ..+-
T Consensus        77 y~~~   80 (163)
T d1pvva2          77 YTDV   80 (163)
T ss_dssp             EECC
T ss_pred             eecc
Confidence            8764

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.67  E-value=0.067  Score=40.34  Aligned_cols=33  Identities=21%  Similarity=0.303  Sum_probs=30.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .||+|+|+ |+.|.-++......|+  +++.+|.++
T Consensus        12 ~kigIlGg-GQL~rMla~aA~~lG~--~v~v~d~~~   44 (111)
T d1kjqa2          12 TRVMLLGS-GELGKEVAIECQRLGV--EVIAVDRYA   44 (111)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHTTTC--EEEEEESST
T ss_pred             CEEEEEeC-CHHHHHHHHHHHHCCC--EEEEEcCCC
Confidence            48999999 9999999999888888  999999875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.47  E-value=0.21  Score=39.64  Aligned_cols=77  Identities=17%  Similarity=0.090  Sum_probs=47.8

Q ss_pred             CCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhh------CC
Q 018618           37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENAL------TG  109 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al------~~  109 (353)
                      +-.+..+|.|+|++|.+|...+..+...+.. +|+..|.++ ....+.++.     .....-....|+.+.+      ++
T Consensus        24 ~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~-~V~~~~~~~~~~~~~~~~G-----a~~~i~~~~~~~~~~~~~~~~~~~   97 (170)
T d1jvba2          24 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAG-----ADYVINASMQDPLAEIRRITESKG   97 (170)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHT-----CSEEEETTTSCHHHHHHHHTTTSC
T ss_pred             CCCCCCEEEEEeccccceeeeeecccccccc-cccccccchhhHHHHHHcC-----CceeeccCCcCHHHHHHHHhhccc
Confidence            3445569999997799999888888776643 899999876 222333332     1111111223433332      46


Q ss_pred             CcEEEEcCCC
Q 018618          110 MDLVIIPAGV  119 (353)
Q Consensus       110 ADiVIi~ag~  119 (353)
                      .|+|+.+.|.
T Consensus        98 ~d~vid~~g~  107 (170)
T d1jvba2          98 VDAVIDLNNS  107 (170)
T ss_dssp             EEEEEESCCC
T ss_pred             chhhhccccc
Confidence            8999998753

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.45  E-value=0.23  Score=40.58  Aligned_cols=72  Identities=17%  Similarity=0.223  Sum_probs=47.7

Q ss_pred             CCeEEEEcC-CCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcC--CCCCeEEEEeCCCchhhhhCCCcEEE
Q 018618           41 GFKVAILGA-AGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHM--DTGAVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        41 ~~KI~IiGa-~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      ..||+++|= ..+|..+++..+..-|.  ++.++-+..   ......++...  .....+..+   .|.++++++||+|.
T Consensus         5 ~lkia~vGD~~nnV~~Sli~~~~~~G~--~l~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~eai~~aDvVy   79 (185)
T d1dxha2           5 DISYAYLGDARNNMGNSLLLIGAKLGM--DVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLT---EDPKEAVKGVDFVH   79 (185)
T ss_dssp             GCEEEEESCCSSHHHHHHHHHHHHTTC--EEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEE---SCHHHHTTTCSEEE
T ss_pred             CCEEEEEcCCcchHHHHHHHHHHHcCC--EEEEEccHHHHhhhHHHHHHHHHhhccCCeEEEE---eChhhccccccEEE
Confidence            469999994 13688888888888787  999998754   12222222211  012445543   57899999999988


Q ss_pred             EcC
Q 018618          115 IPA  117 (353)
Q Consensus       115 i~a  117 (353)
                      ...
T Consensus        80 t~~   82 (185)
T d1dxha2          80 TDV   82 (185)
T ss_dssp             ECC
T ss_pred             eeh
Confidence            763

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.42  E-value=0.32  Score=34.89  Aligned_cols=70  Identities=24%  Similarity=0.281  Sum_probs=48.7

Q ss_pred             CCeEEEEcCCCCcHH-HHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           41 GFKVAILGAAGGIGQ-PLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~-~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      .|||-+||- |-+|. .+|..|.+.|+  .|.-.|..+.. ....|+...  ..+  +.+ .+ .+.++++|+||.+.+.
T Consensus         1 ~~~ihfiGI-gG~GMs~LA~~L~~~G~--~VsGSD~~~~~-~t~~L~~~G--i~i--~~g-h~-~~~i~~~d~vV~SsAI   70 (89)
T d1j6ua1           1 HMKIHFVGI-GGIGMSAVALHEFSNGN--DVYGSNIEETE-RTAYLRKLG--IPI--FVP-HS-ADNWYDPDLVIKTPAV   70 (89)
T ss_dssp             CCEEEEETT-TSHHHHHHHHHHHHTTC--EEEEECSSCCH-HHHHHHHTT--CCE--ESS-CC-TTSCCCCSEEEECTTC
T ss_pred             CcEEEEEeE-CHHHHHHHHHHHHhCCC--eEEEEeCCCCh-hHHHHHHCC--CeE--Eee-ec-ccccCCCCEEEEecCc
Confidence            479999999 66665 67888899999  99999987622 222355543  222  222 23 3568999999999877


Q ss_pred             C
Q 018618          120 P  120 (353)
Q Consensus       120 ~  120 (353)
                      +
T Consensus        71 ~   71 (89)
T d1j6ua1          71 R   71 (89)
T ss_dssp             C
T ss_pred             C
Confidence            6

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=92.40  E-value=0.04  Score=45.25  Aligned_cols=33  Identities=21%  Similarity=0.333  Sum_probs=29.5

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|||| |..|.+.|..|.+.|+ .+|++++..+
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~-~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGI-TDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTC-CCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCC-CcEEEEECCC
Confidence            8999999 9999999999999985 2699999865

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.39  E-value=0.064  Score=45.24  Aligned_cols=35  Identities=29%  Similarity=0.340  Sum_probs=31.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+.||+|||| |..|.+.|..|.+.|+  ++.++|..+
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~--~v~l~E~~~   82 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGY--TVHLTDTAE   82 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhcc--ceeeEeecc
Confidence            4569999999 9999999999999998  999999866

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.37  E-value=0.071  Score=40.76  Aligned_cols=34  Identities=21%  Similarity=0.098  Sum_probs=30.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |.||+|||| |++|.-+|..|...|.  ++.+++..+
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~--~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGS--KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCc--EEEEEeecc
Confidence            469999999 9999999999998887  999999875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.25  E-value=0.14  Score=40.83  Aligned_cols=101  Identities=18%  Similarity=0.169  Sum_probs=61.6

Q ss_pred             CCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchh-hhhCCCcEEE
Q 018618           37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLE-NALTGMDLVI  114 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~-~al~~ADiVI  114 (353)
                      +..+..+|.|+|+ |.+|...+..+...|.  +++.+|.++ ....+.++--   ...+. .....++. ......|+|+
T Consensus        24 ~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~--~vi~~~~~~~k~~~a~~lGa---~~~i~-~~~~~~~~~~~~~~~d~vi   96 (168)
T d1piwa2          24 GCGPGKKVGIVGL-GGIGSMGTLISKAMGA--ETYVISRSSRKREDAMKMGA---DHYIA-TLEEGDWGEKYFDTFDLIV   96 (168)
T ss_dssp             TCSTTCEEEEECC-SHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHHHTC---SEEEE-GGGTSCHHHHSCSCEEEEE
T ss_pred             CcCCCCEEEEECC-CCcchhHHHHhhhccc--cccccccchhHHHHhhccCC---cEEee-ccchHHHHHhhhcccceEE
Confidence            4556679999998 9999998888877786  889999877 3334444431   11121 11112333 3346789999


Q ss_pred             EcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          115 IPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       115 i~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      .+.+.......+                ..++-..|.+.+++++-|
T Consensus        97 ~~~~~~~~~~~~----------------~~~~~l~~~G~iv~~G~~  126 (168)
T d1piwa2          97 VCASSLTDIDFN----------------IMPKAMKVGGRIVSISIP  126 (168)
T ss_dssp             ECCSCSTTCCTT----------------TGGGGEEEEEEEEECCCC
T ss_pred             EEecCCccchHH----------------HHHHHhhccceEEEeccc
Confidence            986644221111                123334488888888644

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=92.22  E-value=0.053  Score=43.22  Aligned_cols=70  Identities=20%  Similarity=0.432  Sum_probs=45.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAG  118 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag  118 (353)
                      -||+|+||+|++|.-+...|...++ ..++.++..++..|..  +...  ........   ..+..+.++|+++++.+
T Consensus         2 ~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~--~~~~--~~~~~~~~---~~~~~~~~~d~~f~~~~   72 (154)
T d2gz1a1           2 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKS--LKFK--DQDITIEE---TTETAFEGVDIALFSAG   72 (154)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCE--EEET--TEEEEEEE---CCTTTTTTCSEEEECSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccc--cccc--CCcccccc---cchhhhhhhhhhhhccC
Confidence            3899999999999999998887763 5688888754322211  1111  12222221   12356789999999853

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.13  E-value=0.099  Score=39.30  Aligned_cols=36  Identities=8%  Similarity=0.098  Sum_probs=31.2

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .++.+|+|+|+ |.+|.-+|..|...+.  ++.+++..+
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~--~vt~i~~~~   55 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGR--RTVMLVRTE   55 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSSC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcch--hheEeeccc
Confidence            34579999999 9999999999998876  899999765

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.07  E-value=0.052  Score=45.39  Aligned_cols=34  Identities=15%  Similarity=0.237  Sum_probs=29.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|||| |..|.+.|..|...+...+|.+||..+
T Consensus         3 kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           3 QICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             eEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            9999999 999999999887664434999999876

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=92.07  E-value=0.58  Score=37.50  Aligned_cols=104  Identities=15%  Similarity=0.156  Sum_probs=63.4

Q ss_pred             cCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCC-chhh-----hhC
Q 018618           36 KGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQP-QLEN-----ALT  108 (353)
Q Consensus        36 ~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~-d~~~-----al~  108 (353)
                      .+.++..+|+|+|+ |.+|...+..+...|. ..|+..|.++ ....+.++-..    .+-.....+ ..+.     .-.
T Consensus        24 a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga-~~Vi~~d~~~~r~~~a~~~Ga~----~~i~~~~~~~~~~~~~~~~~~~   97 (174)
T d1e3ia2          24 AKVTPGSTCAVFGL-GCVGLSAIIGCKIAGA-SRIIAIDINGEKFPKAKALGAT----DCLNPRELDKPVQDVITELTAG   97 (174)
T ss_dssp             SCCCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHHTTCS----EEECGGGCSSCHHHHHHHHHTS
T ss_pred             hCCCCCCEEEEECC-ChHHHHHHHHHHHhCC-ceeeeeccchHHHHHHHHhCCC----cccCCccchhhhhhhHhhhhcC
Confidence            33455679999998 9999999998888874 4788999987 34444444321    111110111 1111     127


Q ss_pred             CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC-cEEEEecCCCCc
Q 018618          109 GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPN-ATVNLISNPVNS  163 (353)
Q Consensus       109 ~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~-a~viv~tNPv~~  163 (353)
                      ++|+||.+.|.+.                  -+-..++-..|. +.+++++.|.+-
T Consensus        98 G~d~vie~~G~~~------------------~~~~a~~~~~~g~G~~v~vG~~~~~  135 (174)
T d1e3ia2          98 GVDYSLDCAGTAQ------------------TLKAAVDCTVLGWGSCTVVGAKVDE  135 (174)
T ss_dssp             CBSEEEESSCCHH------------------HHHHHHHTBCTTTCEEEECCCSSSE
T ss_pred             CCcEEEEecccch------------------HHHHHHHHhhcCCeEEEecCCCCCc
Confidence            8999999987441                  122223333474 888888877654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.00  E-value=0.088  Score=39.86  Aligned_cols=35  Identities=20%  Similarity=0.276  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .|.||+|||| |++|.-+|..+...|.  ++.++...+
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~--~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGA--EVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCC--ceEEEEeec
Confidence            3579999999 9999999999998887  888888655

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.99  E-value=0.048  Score=45.42  Aligned_cols=33  Identities=24%  Similarity=0.360  Sum_probs=27.0

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC----CcEEEEEeC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL----VSVLHLYDV   75 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~----~~el~L~D~   75 (353)
                      |||+|||| |-+|.+.|+.|++.|.    ..++.+++.
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~v~e~~~i~~~   37 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVLQPLDVKVYAD   37 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTSSSCEEEEEES
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCceEEeeeeeccc
Confidence            79999999 9999999999998764    245566654

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.97  E-value=0.31  Score=39.40  Aligned_cols=55  Identities=18%  Similarity=0.396  Sum_probs=41.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|||.+.-||.-++.+|.+.|.  .+.+++...                       .++++-+++||+||...|.|
T Consensus        39 Gk~vvVIGrS~iVGrPLa~lL~~~ga--tVt~~~~~t-----------------------~~l~~~~~~aDivi~a~G~~   93 (170)
T d1a4ia1          39 GRHAVVVGRSKIVGAPMHDLLLWNNA--TVTTCHSKT-----------------------AHLDEEVNKGDILVVATGQP   93 (170)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHHTTC--EEEEECTTC-----------------------SSHHHHHTTCSEEEECCCCT
T ss_pred             cceEEEEecCCccchHHHHHHHhccC--ceEEEeccc-----------------------ccHHHHHhhccchhhccccc
Confidence            46899999977899999999998876  777777532                       34455567777777777655

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.87  E-value=0.067  Score=45.50  Aligned_cols=34  Identities=21%  Similarity=0.321  Sum_probs=29.8

Q ss_pred             CeE-EEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKV-AILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI-~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||| .|+||++-+|..+|..|++.|.  +|++.|+++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga--~V~~~~~~~   35 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGH--QIVGIDIRD   35 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCh
Confidence            454 6779989999999999999998  999999875

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=91.86  E-value=0.2  Score=40.42  Aligned_cols=56  Identities=21%  Similarity=0.468  Sum_probs=43.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      .++|+|||.+.-||.-++.+|.+.+.  .+..++..                       +.++++-+++||+||.++|.|
T Consensus        37 GK~v~VIGrS~~VG~Pla~lL~~~ga--tVt~~h~~-----------------------t~~l~~~~~~ADivI~a~G~p   91 (166)
T d1b0aa1          37 GLNAVVIGASNIVGRPMSMELLLAGC--TTTVTHRF-----------------------TKNLRHHVENADLLIVAVGKP   91 (166)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTTC--EEEEECSS-----------------------CSCHHHHHHHCSEEEECSCCT
T ss_pred             cceEEEEeccccccHHHHHHHHHhhc--cccccccc-----------------------cchhHHHHhhhhHhhhhccCc
Confidence            46899999977899999999988876  66666532                       235567788999999988866


Q ss_pred             C
Q 018618          121 R  121 (353)
Q Consensus       121 ~  121 (353)
                      .
T Consensus        92 ~   92 (166)
T d1b0aa1          92 G   92 (166)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=91.86  E-value=0.038  Score=46.15  Aligned_cols=36  Identities=14%  Similarity=0.157  Sum_probs=30.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCC-----CcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPL-----VSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~-----~~el~L~D~~~   77 (353)
                      |.||+|||| |.-|.+.|..|...|+     ..+|.++|..+
T Consensus         2 p~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           2 PYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            579999999 9999999999988763     24899999876

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.86  E-value=0.074  Score=40.55  Aligned_cols=34  Identities=15%  Similarity=-0.043  Sum_probs=29.7

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |.|++|||| |.+|.-+|..+...|.  +|.++..++
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~--~Vtii~~~~   53 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGL--DVTVMVRSI   53 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCC--eEEEEEech
Confidence            568999999 9999999999998887  888887654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.83  E-value=0.25  Score=40.66  Aligned_cols=79  Identities=18%  Similarity=0.215  Sum_probs=50.0

Q ss_pred             ccCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhh------
Q 018618           35 AKGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------  107 (353)
Q Consensus        35 ~~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al------  107 (353)
                      +.+-++..+|.|+|| |.+|...+..++..+. ..|+.+|.++. ...+.++     ..........+|+.+.+      
T Consensus        20 ~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga-~~Vi~~d~~~~rl~~a~~~-----Ga~~~~~~~~~~~~~~i~~~t~g   92 (195)
T d1kola2          20 TAGVGPGSTVYVAGA-GPVGLAAAASARLLGA-AVVIVGDLNPARLAHAKAQ-----GFEIADLSLDTPLHEQIAALLGE   92 (195)
T ss_dssp             HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHHT-----TCEEEETTSSSCHHHHHHHHHSS
T ss_pred             HhCCCCCCEEEEECc-CHHHHHHHHHHHhhcc-cceeeecccchhhHhhhhc-----cccEEEeCCCcCHHHHHHHHhCC
Confidence            345667789999998 9999887777766664 48999998762 2222222     12222211223443333      


Q ss_pred             CCCcEEEEcCCCC
Q 018618          108 TGMDLVIIPAGVP  120 (353)
Q Consensus       108 ~~ADiVIi~ag~~  120 (353)
                      .++|++|.+.|.+
T Consensus        93 ~g~D~vid~vG~~  105 (195)
T d1kola2          93 PEVDCAVDAVGFE  105 (195)
T ss_dssp             SCEEEEEECCCTT
T ss_pred             CCcEEEEECcccc
Confidence            4799999988754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.81  E-value=0.08  Score=40.22  Aligned_cols=33  Identities=24%  Similarity=0.156  Sum_probs=30.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+|+|+|| |++|.-+|..|...|.  ++.|++..+
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~--~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGY--HVKLIHRGA   65 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTC--EEEEECSSS
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccc--eEEEEeccc
Confidence            48999999 9999999999998887  999999876

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.81  E-value=0.12  Score=46.11  Aligned_cols=69  Identities=10%  Similarity=0.060  Sum_probs=46.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC--cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN--TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~--~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ...++|||+ |..+..-+..+...-...+|.++|+++  .+..+.++.+..  ..+..     +.++++.+||+|+.+.
T Consensus       125 ~~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~--~~~~~-----~~~~a~~~aDiV~taT  195 (320)
T d1omoa_         125 SSVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG--ISASV-----QPAEEASRCDVLVTTT  195 (320)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT--CCEEE-----CCHHHHTSSSEEEECC
T ss_pred             ccEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcC--Ccccc-----chhhhhccccEEEEec
Confidence            348999999 988887776665543367999999876  344455555432  22322     2357899999998864

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=91.78  E-value=0.96  Score=36.13  Aligned_cols=100  Identities=15%  Similarity=0.159  Sum_probs=59.9

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhh------hhCCC
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLEN------ALTGM  110 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~------al~~A  110 (353)
                      -++...|+|+|+ |.+|...+..+...|. .+|+.+|.++ ....+.++--.   ..+. ....++..+      .=.++
T Consensus        27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~-~~Vi~vd~~~~kl~~Ak~~GA~---~~in-~~~~~~~~~~~~~~~~g~G~  100 (176)
T d1d1ta2          27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGA-SRIIGIDLNKDKFEKAMAVGAT---ECIS-PKDSTKPISEVLSEMTGNNV  100 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHHHTCS---EEEC-GGGCSSCHHHHHHHHHTSCC
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCC-ceEEEecCcHHHHHHHHhcCCc---EEEC-ccccchHHHHHHHHhccccc
Confidence            344568999998 9999999988888774 3899999987 33444444321   1111 111111111      12689


Q ss_pred             cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CcEEEEecCCC
Q 018618          111 DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCP-NATVNLISNPV  161 (353)
Q Consensus       111 DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p-~a~viv~tNPv  161 (353)
                      |+||...|.+                  ......+....+ .+.+++++.|.
T Consensus       101 d~vi~~~g~~------------------~~~~~a~~~~~~~~G~~v~vG~~~  134 (176)
T d1d1ta2         101 GYTFEVIGHL------------------ETMIDALASCHMNYGTSVVVGVPP  134 (176)
T ss_dssp             CEEEECSCCH------------------HHHHHHHTTSCTTTCEEEECSCCC
T ss_pred             eEEEEeCCch------------------HHHHHHHHHhhcCCeEEEEEEccc
Confidence            9999987633                  011222333334 48888888664

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.57  E-value=1.2  Score=38.40  Aligned_cols=156  Identities=12%  Similarity=0.125  Sum_probs=78.4

Q ss_pred             CeEEEE-cCCCCcHHHHHHHHHhCCCCcEEEEEeC---CC--cHHHHHHHhcCC-CCCeEEEEe-CCCchhh---h----
Q 018618           42 FKVAIL-GAAGGIGQPLAMLMKINPLVSVLHLYDV---VN--TPGVTADISHMD-TGAVVRGFL-GQPQLEN---A----  106 (353)
Q Consensus        42 ~KI~Ii-Ga~G~vG~~la~~l~~~~~~~el~L~D~---~~--~~~~~~dl~~~~-~~~~v~~~~-~t~d~~~---a----  106 (353)
                      +||++| ||++-+|..+|..|++.|.  .+++++.   +.  ............ ....+..+. .-+|.++   +    
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga--~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~   79 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPS--QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV   79 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTT--CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCC--CeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhc
Confidence            377654 9999999999999999886  4444442   21  111111111111 122333321 1123211   1    


Q ss_pred             -hCCCcEEEEcCCCCCCCC---CC---HHHHHHHHH----HHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHh
Q 018618          107 -LTGMDLVIIPAGVPRKPG---MT---RDDLFNINA----GIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKA  175 (353)
Q Consensus       107 -l~~ADiVIi~ag~~~~~g---~~---r~~~~~~N~----~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~  175 (353)
                       -...|++|..+|......   .+   ....+..|+    ...+.+.+.|++.. .+.||++|.-....           
T Consensus        80 ~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~-----------  147 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLM-----------  147 (285)
T ss_dssp             TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTS-----------
T ss_pred             cccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcC-----------
Confidence             146899999887643221   12   233445554    45666667777654 45566654322111           


Q ss_pred             CCCCCCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          176 GTYDPKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       176 ~~~~~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                       +.|..-.++.+.-.-..|-+.+|..+  .+..|++..+
T Consensus       148 -~~~~~~~Y~asKaal~~l~~~la~El--~~~gIrVn~V  183 (285)
T d1jtva_         148 -GLPFNDVYCASKFALEGLCESLAVLL--LPFGVHLSLI  183 (285)
T ss_dssp             -CCTTCHHHHHHHHHHHHHHHHHHHHH--GGGTEEEEEE
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHHHh--hccCcEEEEE
Confidence             12222233333333345666677766  3455555444

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=91.53  E-value=0.14  Score=43.10  Aligned_cols=71  Identities=17%  Similarity=0.170  Sum_probs=42.0

Q ss_pred             CCCeEEEEcCCCCcHH-HHHHHHHhCCCCcEEE-EEeCCCcHH--HHHHHhcCCCCCeEEEEeCCCchhhhhC--CCcEE
Q 018618           40 AGFKVAILGAAGGIGQ-PLAMLMKINPLVSVLH-LYDVVNTPG--VTADISHMDTGAVVRGFLGQPQLENALT--GMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~-~la~~l~~~~~~~el~-L~D~~~~~~--~~~dl~~~~~~~~v~~~~~t~d~~~al~--~ADiV  113 (353)
                      ++.||+|||+ |.+|. +++..+...+.+ +|+ ++|++...+  .+.++. .. ...+..+   +|+++.++  +.|+|
T Consensus        32 ~~iriaiIG~-G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~-i~-~~~~~~~---~d~~ell~~~~iD~V  104 (221)
T d1h6da1          32 RRFGYAIVGL-GKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYG-VD-PRKIYDY---SNFDKIAKDPKIDAV  104 (221)
T ss_dssp             CCEEEEEECC-SHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTT-CC-GGGEECS---SSGGGGGGCTTCCEE
T ss_pred             CCEEEEEEcC-cHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhc-cc-ccccccc---Cchhhhcccccceee
Confidence            3469999998 99996 455555554433 655 889876222  222221 11 1233332   56767664  57889


Q ss_pred             EEcC
Q 018618          114 IIPA  117 (353)
Q Consensus       114 Ii~a  117 (353)
                      +++.
T Consensus       105 ~I~t  108 (221)
T d1h6da1         105 YIIL  108 (221)
T ss_dssp             EECS
T ss_pred             eecc
Confidence            8874

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=91.52  E-value=0.13  Score=41.36  Aligned_cols=97  Identities=19%  Similarity=0.234  Sum_probs=56.3

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      -++..+|.|.||+|.+|+..+..++..|.  +++..+.++ ....+.++.   . ..+-.+....+....-+++|+|+-+
T Consensus        25 ~~~g~~VlI~ga~G~vG~~aiqlak~~G~--~vi~~~~~~~~~~~~~~lG---a-~~~i~~~~~~~~~~~~~g~D~v~d~   98 (171)
T d1iz0a2          25 ARPGEKVLVQAAAGALGTAAVQVARAMGL--RVLAAASRPEKLALPLALG---A-EEAATYAEVPERAKAWGGLDLVLEV   98 (171)
T ss_dssp             CCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSGGGSHHHHHTT---C-SEEEEGGGHHHHHHHTTSEEEEEEC
T ss_pred             CCCCCEEEEEeccccchhhhhhhhccccc--ccccccccccccccccccc---c-ceeeehhhhhhhhhccccccccccc
Confidence            34556899999889999999988888887  778777655 222222221   1 1222211101112344789999987


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCC
Q 018618          117 AGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNP  160 (353)
Q Consensus       117 ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNP  160 (353)
                      .|..                 +.   ..++...|.+.++.+++|
T Consensus        99 ~G~~-----------------~~---~~~~~l~~~G~~v~~G~~  122 (171)
T d1iz0a2          99 RGKE-----------------VE---ESLGLLAHGGRLVYIGAA  122 (171)
T ss_dssp             SCTT-----------------HH---HHHTTEEEEEEEEEC---
T ss_pred             cchh-----------------HH---HHHHHHhcCCcEEEEeCC
Confidence            6511                 11   224444588888887654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.47  E-value=0.035  Score=45.38  Aligned_cols=77  Identities=19%  Similarity=0.251  Sum_probs=49.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc----HHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT----PGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~----~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      .++|+|||-+.-||.-++.+|.+.|.  .+.++|.+..    ......+.+.. -+.+..+ ..+++++....||+||..
T Consensus        29 GK~vvVIGrS~iVG~Pla~lL~~~ga--TVt~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~lk~~~~~aDIvIsa  104 (171)
T d1edza1          29 GKKCIVINRSEIVGRPLAALLANDGA--TVYSVDVNNIQKFTRGESLKLNKHH-VEDLGEY-SEDLLKKCSLDSDVVITG  104 (171)
T ss_dssp             TCEEEEECCCTTTHHHHHHHHHTTSC--EEEEECSSEEEEEESCCCSSCCCCE-EEEEEEC-CHHHHHHHHHHCSEEEEC
T ss_pred             CCEEEEECCccccHHHHHHHHHHCCC--EEEEeccccccccccccceeeeeec-ccccccc-chhHHhhccccCCEEEEc
Confidence            46899999966789999999998876  8888887541    10111111111 0122221 113467778899999999


Q ss_pred             CCCCC
Q 018618          117 AGVPR  121 (353)
Q Consensus       117 ag~~~  121 (353)
                      .|.|.
T Consensus       105 vG~p~  109 (171)
T d1edza1         105 VPSEN  109 (171)
T ss_dssp             CCCTT
T ss_pred             cCCCc
Confidence            88764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.41  E-value=0.082  Score=40.88  Aligned_cols=25  Identities=24%  Similarity=0.424  Sum_probs=22.3

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPL   66 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~   66 (353)
                      |||+|.|++|.+|+.++..+...++
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~   25 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGH   25 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCC
Confidence            7999999999999999888777776

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.31  E-value=1.1  Score=37.92  Aligned_cols=32  Identities=19%  Similarity=0.195  Sum_probs=27.5

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ..|+||++-+|..+|..|++.|.  +|++.|.+.
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga--~V~i~~~~~   36 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY--AVCLHYHRS   36 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC--EEEEEESSC
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC--EEEEEeCCC
Confidence            34669988999999999999998  899988765

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.26  E-value=0.071  Score=43.45  Aligned_cols=32  Identities=22%  Similarity=0.236  Sum_probs=29.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      -|+|||| |..|.+.|..|++.|.  +|.++|.++
T Consensus         7 DviViGa-G~~Gl~~A~~La~~G~--~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGT-GITECILSGLLSVDGK--KVLHIDKQD   38 (297)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--CEEEEcCCC
Confidence            4899999 9999999999999998  899999976

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=90.99  E-value=0.072  Score=46.31  Aligned_cols=33  Identities=24%  Similarity=0.342  Sum_probs=29.1

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      +|+|||| |-+|.+.|+.|++.|. .+|+|+|.+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~-~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGW-NNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTC-CCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCC-CcEEEEeCCC
Confidence            8999999 9999999999998885 2799999764

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=90.82  E-value=0.079  Score=45.42  Aligned_cols=32  Identities=22%  Similarity=0.378  Sum_probs=29.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      -|+|||| |.+|.+.|+.|++.|+  +++|+|...
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~--~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGV--KTLLVDAFD   36 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--cEEEEeCCC
Confidence            4899999 9999999999999998  999999754

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.47  E-value=0.081  Score=46.53  Aligned_cols=33  Identities=21%  Similarity=0.213  Sum_probs=30.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+|+|||| |..|.+.|..|++.|.  +|.++|.++
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~--~V~iiEk~~   34 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNK--KVLVIEKRN   34 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTC--CEEEECSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCC--cEEEEECCC
Confidence            47999999 9999999999998887  899999876

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=90.43  E-value=0.059  Score=48.01  Aligned_cols=103  Identities=15%  Similarity=0.181  Sum_probs=61.6

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHh----CCCC-----cEEEEEeCCC--cHHHHHHHhcC--CCCCeEEEEeCCCchhhhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKI----NPLV-----SVLHLYDVVN--TPGVTADISHM--DTGAVVRGFLGQPQLENAL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~----~~~~-----~el~L~D~~~--~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al  107 (353)
                      ..||+|.|| |..|..++.+|..    .|+-     ..++++|...  .+.. .|+...  .+.....   ...++.+++
T Consensus        25 d~kivi~GA-GaAg~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r-~d~~~~k~~~a~~~~---~~~~l~~~i   99 (308)
T d1o0sa1          25 QEKYLFFGA-GAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNR-KEMNPRHVQFAKDMP---ETTSILEVI   99 (308)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTC-SSCCGGGTTTCBSSC---CCCCHHHHH
T ss_pred             HcEEEEECc-CHHHHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCC-cccCHHHHHHHHhcc---cCCcHHHHH
Confidence            459999999 9999998876643    3432     4699999865  1111 122211  1111111   123455555


Q ss_pred             CCC--cEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          108 TGM--DLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       108 ~~A--DiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                      +.+  +++|-+.+.+   |.-           ..++.+.|.+.+++.+|+-.|||..
T Consensus       100 ~~~kptvliG~s~~~---g~f-----------t~evv~~Ma~~~~~PIIFaLSNPtp  142 (308)
T d1o0sa1         100 RAARPGALIGASTVR---GAF-----------NEEVIRAMAEINERPIIFALSNPTS  142 (308)
T ss_dssp             HHHCCSEEEECSSCT---TCS-----------CHHHHHHHHHHCSSCEEEECCSSGG
T ss_pred             hccccccEEeccccc---CCC-----------CHHHHHHHHhhCCCcEEEEccCCCC
Confidence            433  4666555443   321           2456677888999999999999975

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=90.29  E-value=0.37  Score=37.93  Aligned_cols=70  Identities=13%  Similarity=0.070  Sum_probs=43.5

Q ss_pred             CCeEEEEcCCCC--cHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEc
Q 018618           41 GFKVAILGAAGG--IGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIP  116 (353)
Q Consensus        41 ~~KI~IiGa~G~--vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~  116 (353)
                      ..||+++|=..+  |..+++..+..-|.  +++++-..+....-.++... ....+..+   +|+++++++||+|..+
T Consensus         3 gl~i~~vGD~~~sRv~~Sl~~~l~~~g~--~~~~~~p~~~~~~~~~~~~~-~~~~~~~~---~d~~eai~~aDvvy~~   74 (153)
T d1pg5a2           3 GLVFALLGDLKYARTVNSLLRILTRFRP--KLVYLISPQLLRARKEILDE-LNYPVKEV---ENPFEVINEVDVLYVT   74 (153)
T ss_dssp             TCEEEEEECCSSCHHHHHHHHHGGGSCC--SEEEEECCGGGCCCHHHHTT-CCSCEEEE---SCGGGTGGGCSEEEEE
T ss_pred             CCEEEEECCCCccHHHHHHHHHHHHcCC--eeEEEecccccccchhhccc-CCCeEEEE---eCHHHHhhcCCeEEEe
Confidence            469999998334  88888888887776  55555443311000111111 13455553   5778999999988776

>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=90.22  E-value=0.091  Score=46.55  Aligned_cols=104  Identities=16%  Similarity=0.187  Sum_probs=62.2

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHh----CCC-----CcEEEEEeCCC-cHHHHHHHhcCC--CCCeEEEEeCCCchhhhhC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKI----NPL-----VSVLHLYDVVN-TPGVTADISHMD--TGAVVRGFLGQPQLENALT  108 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~----~~~-----~~el~L~D~~~-~~~~~~dl~~~~--~~~~v~~~~~t~d~~~al~  108 (353)
                      ..||+|.|| |..|..++.+|..    .|+     ...++++|... ......|+.+..  +.....   ...++++.++
T Consensus        25 d~kiV~~GA-GsAg~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~~~a~~~~---~~~~l~~~i~  100 (298)
T d1gq2a1          25 DHTVLFQGA-GEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHC---EMKNLEDIVK  100 (298)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCC---CCCCHHHHHH
T ss_pred             HcEEEEECc-cHHHHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHHHHHHHhh---hhhhhHHHhh
Confidence            469999999 9999998876643    243     25799999876 111111232211  000111   1134455554


Q ss_pred             --CCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCC
Q 018618          109 --GMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVN  162 (353)
Q Consensus       109 --~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~  162 (353)
                        +.+++|-+.+.+   |.-           .+++.+.|.+.+++.+|+-.|||..
T Consensus       101 ~vkptvliG~s~~~---g~f-----------t~evv~~ma~~~~~PIIFaLSNPt~  142 (298)
T d1gq2a1         101 DIKPTVLIGVAAIG---GAF-----------TQQILQDMAAFNKRPIIFALSNPTS  142 (298)
T ss_dssp             HHCCSEEEECSCCT---TCS-----------CHHHHHHHHHHCSSCEEEECCSSGG
T ss_pred             ccChheeEeccccc---CcC-----------CHHHHHHHHhhCCCCEEEEccCCCC
Confidence              366777665544   321           2356667778899999999999975

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=89.91  E-value=0.3  Score=39.76  Aligned_cols=74  Identities=18%  Similarity=0.137  Sum_probs=44.8

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEE-EeCCCc-HHHHHHHhcCC---C--------CCeEEEEeCCCchhhhh
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHL-YDVVNT-PGVTADISHMD---T--------GAVVRGFLGQPQLENAL  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L-~D~~~~-~~~~~dl~~~~---~--------~~~v~~~~~t~d~~~al  107 (353)
                      +.||+|.|- |.+|..++..+.+++-. ||+- .|..+. .....-..+..   .        ...+.   ...+++..+
T Consensus         1 MIKVaINGf-GRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~---v~g~~~~~~   75 (178)
T d1b7go1           1 MVNVAVNGY-GTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIP---VAGTVEDLI   75 (178)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCC---CCCCHHHHH
T ss_pred             CeEEEEECC-CHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceecccccee---cCCchhhhh
Confidence            459999998 99999999999887654 5444 455442 21111111110   0        01111   124566778


Q ss_pred             CCCcEEEEcCCC
Q 018618          108 TGMDLVIIPAGV  119 (353)
Q Consensus       108 ~~ADiVIi~ag~  119 (353)
                      .++|+||.+.|.
T Consensus        76 ~~vDiViecTG~   87 (178)
T d1b7go1          76 KTSDIVVDTTPN   87 (178)
T ss_dssp             HHCSEEEECCST
T ss_pred             hcCCEEEECCCC
Confidence            899999998753

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=89.84  E-value=0.17  Score=43.08  Aligned_cols=162  Identities=17%  Similarity=0.137  Sum_probs=84.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEe-CCCch---hh-------hh--
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFL-GQPQL---EN-------AL--  107 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~-~t~d~---~~-------al--  107 (353)
                      ++.|.|+||++-+|..++..|++.|....|++.+++..+.  .++.... ...+..+. .-+|.   ++       .+  
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~--~~l~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA--TELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC--HHHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH--HHHHHhh-CCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            3578899999999999999999988644788888765221  1233322 12233221 11221   11       11  


Q ss_pred             CCCcEEEEcCCCCCCC----CCCH---HHHHHHHHH----HHHHHHHHHHhhC----------CCcEEEEecCCCCchhH
Q 018618          108 TGMDLVIIPAGVPRKP----GMTR---DDLFNINAG----IVRTLCEGIAKCC----------PNATVNLISNPVNSTVP  166 (353)
Q Consensus       108 ~~ADiVIi~ag~~~~~----g~~r---~~~~~~N~~----i~~~i~~~i~~~~----------p~a~viv~tNPv~~~t~  166 (353)
                      .+-|++|..||.....    ..+.   ...+..|+.    ..+.+.+.+++..          ..+.+++++........
T Consensus        80 ~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence            2389999999864221    2222   234555544    4455555555432          23555555543322210


Q ss_pred             HHHHHHHHhCCCC--CCceEeechhhHHHHHHHHHHHhCCCCCCCcceEE
Q 018618          167 IAAEVFKKAGTYD--PKKLLGVTMLDVVRANTFVAEVLGLDPRDVDVPVV  214 (353)
Q Consensus       167 ~~~~~~~~~~~~~--~~kviG~t~ld~~R~~~~lA~~l~v~~~~v~~~vi  214 (353)
                             ...+.+  +.-.++.+......+-+.+|+.+  .+..|++..+
T Consensus       160 -------~~~~~~~~~~~aY~aSKaal~~l~~~la~el--~~~gI~v~~i  200 (250)
T d1yo6a1         160 -------NTSGSAQFPVLAYRMSKAAINMFGRTLAVDL--KDDNVLVVNF  200 (250)
T ss_dssp             -------CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHT--GGGTCEEEEE
T ss_pred             -------CcccccchhHHHHHHHHHHHHHHHHHHHHHh--cccCeEEEEE
Confidence                   001111  11123444444455677788776  3455655544

>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Escherichia coli [TaxId: 562]

Probab=89.78  E-value=0.86  Score=36.72  Aligned_cols=71  Identities=13%  Similarity=0.237  Sum_probs=46.7

Q ss_pred             CCeEEEEcCC-CCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHH---HHHHhcCCCCCeEEEEeCCCchhhhhCCCcEE
Q 018618           41 GFKVAILGAA-GGIGQPLAMLMKINPLVSVLHLYDVVN---TPGV---TADISHMDTGAVVRGFLGQPQLENALTGMDLV  113 (353)
Q Consensus        41 ~~KI~IiGa~-G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~---~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiV  113 (353)
                      ..||+++|=+ ..|..+++..+..-|.  ++.++-...   ....   +.+.... .+..+..+   .|.+++++++|+|
T Consensus         5 ~l~i~~vGD~~nnv~~Sli~~~~~~g~--~l~~~~P~~~~~~~~~~~~~~~~~~~-~g~~~~~~---~d~~~a~~~aDvv   78 (183)
T d1duvg2           5 EMTLVYAGDARNNMGNSMLEAAALTGL--DLRLVAPQACWPEAALVTECRALAQQ-NGGNITLT---EDVAKGVEGADFI   78 (183)
T ss_dssp             GCEEEEESCTTSHHHHHHHHHHHHHCC--EEEEECCGGGCCCHHHHHHHHHHHHH-TTCEEEEE---SCHHHHHTTCSEE
T ss_pred             CCEEEEEcCCccHHHHHHHHHHHHcCC--EEEEEechHhhhhHHHHHHHHHHHHh-cCCceEEE---echhhccccCCEE
Confidence            4699999951 2577777777776687  999998765   1111   2222221 13445543   5788999999999


Q ss_pred             EEcC
Q 018618          114 IIPA  117 (353)
Q Consensus       114 Ii~a  117 (353)
                      ..+.
T Consensus        79 yt~~   82 (183)
T d1duvg2          79 YTDV   82 (183)
T ss_dssp             EECC
T ss_pred             EEEe
Confidence            8864

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.63  E-value=0.42  Score=39.56  Aligned_cols=102  Identities=21%  Similarity=0.306  Sum_probs=60.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEE-------EE--------------eCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVR-------GF--------------LGQ  100 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~-------~~--------------~~t  100 (353)
                      +|-|||- |-.|.+++..+.+.++ ..+++.+|.+.   ..  |.......++.       ..              ...
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~---~~--L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~   76 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDA---QA--LLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAK   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCH---HH--HHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchH---HH--HhcCCcchhhccccccccCCCcCcChhhhHhhHHHHH
Confidence            6788998 8889999999988875 35888888763   22  22221111111       10              001


Q ss_pred             CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       101 ~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      ....++++++|+||+++|..-..|       .--.|++.++++...    --.+-++|-|-
T Consensus        77 ~~I~~~l~~~d~vfi~AGlGGgTG-------tGaaPviA~iake~g----~l~v~ivt~PF  126 (198)
T d1rq2a1          77 DEIEELLRGADMVFVTAGEGGGTG-------TGGAPVVASIARKLG----ALTVGVVTRPF  126 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHHHT----CEEEEEEEECC
T ss_pred             HHHHHHhcCCCEEEEEEecCCCCC-------cchHHHHHHHHHHcC----CcEEEEEecCh
Confidence            234578899999999988663322       333666767776652    11234455553

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.49  E-value=0.14  Score=47.74  Aligned_cols=33  Identities=30%  Similarity=0.558  Sum_probs=29.9

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||.|||+ |.+|+.++..|+..|+. +|.|+|.+.
T Consensus        39 kVlvvG~-GglG~ei~k~L~~~Gvg-~i~lvD~D~   71 (426)
T d1yovb1          39 KVLVIGA-GGLGCELLKNLALSGFR-QIHVIDMDT   71 (426)
T ss_dssp             CEEEECS-STTHHHHHHHHHTTTCC-CEEEECCCB
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCC-eEEEEECCC
Confidence            8999999 99999999999999864 899999864

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.47  E-value=0.33  Score=46.28  Aligned_cols=33  Identities=12%  Similarity=0.227  Sum_probs=29.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|+|+ |.+|+.++..|+..|+ .++.|+|.+.
T Consensus        27 ~VlvvG~-gglG~Ei~knLvl~GV-g~itivD~d~   59 (529)
T d1yova1          27 HVCLINA-TATGTEILKNLVLPGI-GSFTIIDGNQ   59 (529)
T ss_dssp             EEEECCC-SHHHHHHHHHHHTTTC-SEEEEECCSB
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcC-CEEEEEcCCc
Confidence            9999999 9999999999999886 5899999754

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.41  E-value=0.51  Score=37.56  Aligned_cols=74  Identities=19%  Similarity=0.256  Sum_probs=46.9

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh------CCCcE
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL------TGMDL  112 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al------~~ADi  112 (353)
                      .+..+|.|+||+|.+|...+..+...|.  +++..+.++.  ....+...  ++...+.....|+.+.+      ++.|+
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~--~vi~~~~~~~--~~~~l~~~--Ga~~vi~~~~~~~~~~v~~~t~~~g~d~   97 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDA--KREMLSRL--GVEYVGDSRSVDFADEILELTDGYGVDV   97 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHH--HHHHHHTT--CCSEEEETTCSTHHHHHHHHTTTCCEEE
T ss_pred             CCCCEEEEECCCCCcccccchhhccccc--cceeeecccc--cccccccc--cccccccCCccCHHHHHHHHhCCCCEEE
Confidence            3445899999989999999988888786  7777765432  11122322  22222212334565555      67999


Q ss_pred             EEEcCC
Q 018618          113 VIIPAG  118 (353)
Q Consensus       113 VIi~ag  118 (353)
                      |+-+.|
T Consensus        98 v~d~~g  103 (183)
T d1pqwa_          98 VLNSLA  103 (183)
T ss_dssp             EEECCC
T ss_pred             EEeccc
Confidence            999875

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.28  E-value=0.18  Score=38.57  Aligned_cols=35  Identities=20%  Similarity=0.286  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .|.+++|+|+ |.+|.-+|..+...|.  ++.+++..+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~--~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGS--RLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCC--EEEEEEeec
Confidence            3579999999 9999999999988887  999998755

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=89.20  E-value=0.56  Score=35.35  Aligned_cols=94  Identities=12%  Similarity=0.047  Sum_probs=55.4

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchh----hhhCCCcEEEEcCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLE----NALTGMDLVIIPAG  118 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~----~al~~ADiVIi~ag  118 (353)
                      .|.|+|. |.+|..++..|.  +.  +++++|.++....  .+..... .-+.+  ..++.+    ..+..|+.+|++..
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~--~i~vi~~d~~~~~--~~~~~~~-~~i~G--d~~~~~~L~~a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GS--EVFVLAEDENVRK--KVLRSGA-NFVHG--DPTRVSDLEKANVRGARAVIVNLE   71 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GG--GEEEEESCTTHHH--HHHHTTC-EEEES--CTTSHHHHHHTTCTTCSEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHc--CC--CCEEEEcchHHHH--HHHhcCc-ccccc--ccCCHHHHHHhhhhcCcEEEEecc
Confidence            6889998 999999998874  33  5688898773222  2222211 11221  123321    33588999999742


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEec-CCC
Q 018618          119 VPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLIS-NPV  161 (353)
Q Consensus       119 ~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~t-NPv  161 (353)
                      .      +     ..|+.    ++..+++.+|+..++.-+ +|-
T Consensus        72 ~------d-----~~n~~----~~~~~r~~~~~~~iia~~~~~~  100 (129)
T d2fy8a1          72 S------D-----SETIH----CILGIRKIDESVRIIAEAERYE  100 (129)
T ss_dssp             S------H-----HHHHH----HHHHHHHHCSSSCEEEECSSGG
T ss_pred             c------h-----hhhHH----HHHHHHHHCCCceEEEEEcCHH
Confidence            1      1     33443    345567788997666655 444

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=88.86  E-value=0.46  Score=39.33  Aligned_cols=36  Identities=28%  Similarity=0.345  Sum_probs=31.9

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      -+..+|+|-|- |+||+.++..|.+.|.  .|+.+|++.
T Consensus        25 L~gk~v~IqG~-G~VG~~~A~~L~~~Ga--kvvv~d~d~   60 (201)
T d1c1da1          25 LDGLTVLVQGL-GAVGGSLASLAAEAGA--QLLVADTDT   60 (201)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTC--EEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCC--EEEEecchH
Confidence            34579999998 9999999999999987  899999875

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.76  E-value=0.23  Score=41.22  Aligned_cols=89  Identities=18%  Similarity=0.281  Sum_probs=54.5

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCC-CcEEEEEeCCCcHHHHHHHhcCCCCCeEEE---------------------EeCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPL-VSVLHLYDVVNTPGVTADISHMDTGAVVRG---------------------FLGQ  100 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~-~~el~L~D~~~~~~~~~dl~~~~~~~~v~~---------------------~~~t  100 (353)
                      +|.|||- |..|.+++..+...++ ..+++.+|.+.     .+|.......++..                     ....
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~-----~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~   76 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDA-----QALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDR   76 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBT-----GGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcH-----HHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHH
Confidence            6889998 8899999999888774 34889999875     12222211111110                     0001


Q ss_pred             CchhhhhCCCcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 018618          101 PQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEG  144 (353)
Q Consensus       101 ~d~~~al~~ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~  144 (353)
                      ....+.++++|.||+++|..-..|       .--.+++.++++.
T Consensus        77 ~~I~~~l~~~d~vfi~AGlGGGTG-------tgaapviA~~ake  113 (198)
T d1ofua1          77 ERISEVLEGADMVFITTGMGGGTG-------TGAAPIIAEVAKE  113 (198)
T ss_dssp             HHHHHHHTTCSEEEEEEETTSSHH-------HHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCeEEEEecCCCCcc-------ccHHHHHHHHHHH
Confidence            224567899999999988653222       3335666666554

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=88.68  E-value=0.17  Score=42.37  Aligned_cols=33  Identities=21%  Similarity=0.401  Sum_probs=30.4

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+.|+||++-+|..+|..|++.|.  +|++.|+++
T Consensus         3 ~alITGas~GIG~aiA~~la~~Ga--~V~i~~~~~   35 (241)
T d1uaya_           3 SALVTGGASGLGRAAALALKARGY--RVVVLDLRR   35 (241)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTC--EEEEEESSC
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCc
Confidence            678889999999999999999998  999999876

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=88.65  E-value=0.14  Score=38.95  Aligned_cols=35  Identities=17%  Similarity=0.213  Sum_probs=31.1

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .|.+++|||| |.+|.-+|..+...|.  ++.++...+
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~--~Vtvi~~~~   58 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGS--EVTVVEFAS   58 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTC--EEEEECSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCC--eEEEEEEcc
Confidence            3579999999 9999999999998887  999998765

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=88.63  E-value=0.34  Score=38.25  Aligned_cols=63  Identities=13%  Similarity=0.177  Sum_probs=43.6

Q ss_pred             CCeEEEEcC--CCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcC
Q 018618           41 GFKVAILGA--AGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPA  117 (353)
Q Consensus        41 ~~KI~IiGa--~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~a  117 (353)
                      ..||+++|=  .+.|..+++..+..-|.  +++++.....       ...  ...+..+   .|+++++++||+|..+.
T Consensus         3 gl~i~~vGD~~~srv~~Sl~~~~~~~g~--~~~i~~P~~~-------~~~--~~~~~~~---~~~~ea~~~aDviy~~r   67 (151)
T d2at2a2           3 GLTVSIHGDIKHSRVARSNAEVLTRLGA--RVLFSGPSEW-------QDE--ENTFGTY---VSMDEAVESSDVVMLLR   67 (151)
T ss_pred             CCEEEEEcCCCCCHHHHHHHHHHHHcCC--cccccCCchh-------hcc--ccceeEE---EechhccccCceeeeeE
Confidence            469999997  45689999888887776  7888876541       100  0123332   36679999999988763

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=88.56  E-value=0.15  Score=42.64  Aligned_cols=32  Identities=25%  Similarity=0.217  Sum_probs=29.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      -|+|||| |..|...|..|++.|+  +++|+|.++
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~--~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGA--NVLLLDKGN   35 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--cEEEEeCCC
Confidence            4899999 9999999999999998  999999876

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=88.48  E-value=0.6  Score=37.03  Aligned_cols=72  Identities=17%  Similarity=0.077  Sum_probs=47.4

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhh------CCCcE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------TGMDL  112 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al------~~ADi  112 (353)
                      +..+|.|+||+|.+|...+..+...|.  +++..|.++. ...+.++-   . ..+-.. .+.|+.+.+      ++.|+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga--~Vi~~~~s~~k~~~~~~lG---a-~~vi~~-~~~d~~~~v~~~t~g~g~d~  100 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKAG---A-WQVINY-REEDLVERLKEITGGKKVRV  100 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHT---C-SEEEET-TTSCHHHHHHHHTTTCCEEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCC--eEeecccchHHHHHHHhcC---C-eEEEEC-CCCCHHHHHHHHhCCCCeEE
Confidence            445899999988899999988888887  8999998762 22333332   1 122222 235665544      46788


Q ss_pred             EEEcCC
Q 018618          113 VIIPAG  118 (353)
Q Consensus       113 VIi~ag  118 (353)
                      |+-+.|
T Consensus       101 v~d~~g  106 (179)
T d1qora2         101 VYDSVG  106 (179)
T ss_dssp             EEECSC
T ss_pred             EEeCcc
Confidence            888765

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=88.27  E-value=0.15  Score=44.93  Aligned_cols=33  Identities=18%  Similarity=0.209  Sum_probs=30.4

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ..|+|||| |..|...|..|.+.|+  +++++|..+
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~--~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGR--SVHVIETAG   40 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCC--CEEEEEcCC
Confidence            48999999 9999999999999998  899999876

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.10  E-value=4.2  Score=31.07  Aligned_cols=112  Identities=11%  Similarity=0.049  Sum_probs=64.4

Q ss_pred             eEEEEcCC---CCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCC
Q 018618           43 KVAILGAA---GGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGV  119 (353)
Q Consensus        43 KI~IiGa~---G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~  119 (353)
                      +|+||||+   +..|..++..|...|+  +|+.+..+..     ++.      ....+   .++++.=...|+|++... 
T Consensus        21 sIAVVGaS~~~~~~g~~v~~~L~~~g~--~v~pVnP~~~-----~i~------G~~~~---~sl~dlp~~iD~v~i~vp-   83 (139)
T d2d59a1          21 KIALVGASPKPERDANIVMKYLLEHGY--DVYPVNPKYE-----EVL------GRKCY---PSVLDIPDKIEVVDLFVK-   83 (139)
T ss_dssp             EEEEETCCSCTTSHHHHHHHHHHHTTC--EEEEECTTCS-----EET------TEECB---SSGGGCSSCCSEEEECSC-
T ss_pred             eEEEEeecCCCCCchHHHHHHHHHCCC--EEEEECCccc-----ccC------CCccc---ccccccCccceEEEEEeC-
Confidence            89999996   4689999999999998  8999886531     011      11111   234333356888888732 


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEee-c-hhhHHHH
Q 018618          120 PRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGV-T-MLDVVRA  194 (353)
Q Consensus       120 ~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~-t-~ld~~R~  194 (353)
                                     .+.+.++.+++.+.+..++.+..+.-.+.    +.+.+++. |+   +++|= | ..+..|+
T Consensus        84 ---------------~~~~~~~~~e~~~~g~k~v~~~~G~~~ee----~~~~a~~~-gi---~vig~~C~~v~~~rl  137 (139)
T d2d59a1          84 ---------------PKLTMEYVEQAIKKGAKVVWFQYNTYNRE----ASKKADEA-GL---IIVANRCMMREHERL  137 (139)
T ss_dssp             ---------------HHHHHHHHHHHHHHTCSEEEECTTCCCHH----HHHHHHHT-TC---EEEESCCHHHHHHHH
T ss_pred             ---------------HHHHHHHHHHHHHhCCCEEEEeccccCHH----HHHHHHHC-CC---EEEcCCcChhhhhhh
Confidence                           33455666666666766544433322222    22334443 43   67875 6 4444443

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=87.60  E-value=0.66  Score=38.98  Aligned_cols=73  Identities=14%  Similarity=0.242  Sum_probs=38.8

Q ss_pred             CCCCeEEEEcCCCCcH----HHHHHHHHhCCCCcEEE-EEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhh--CCCc
Q 018618           39 AAGFKVAILGAAGGIG----QPLAMLMKINPLVSVLH-LYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENAL--TGMD  111 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG----~~la~~l~~~~~~~el~-L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al--~~AD  111 (353)
                      .+++||+|||+ |..|    ..-...+.......+|+ ++|++....... ..... ......+   .|+++.+  .+.|
T Consensus        14 ~k~irvgiIG~-G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~-~~~~~-~~~~~~~---~~~~~l~~~~~iD   87 (237)
T d2nvwa1          14 SRPIRVGFVGL-TSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQT-IEQLQ-LKHATGF---DSLESFAQYKDID   87 (237)
T ss_dssp             GCCEEEEEECC-CSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHH-HHHTT-CTTCEEE---SCHHHHHHCTTCS
T ss_pred             CCCeEEEEEec-CccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHH-HHhcc-cccceee---cchhhcccccccc
Confidence            45689999998 7643    33344454432222666 788865222111 11111 1223333   4666666  4577


Q ss_pred             EEEEcC
Q 018618          112 LVIIPA  117 (353)
Q Consensus       112 iVIi~a  117 (353)
                      +|+++.
T Consensus        88 ~V~i~t   93 (237)
T d2nvwa1          88 MIVVSV   93 (237)
T ss_dssp             EEEECS
T ss_pred             eeeccC
Confidence            888873

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=87.59  E-value=0.89  Score=36.21  Aligned_cols=77  Identities=16%  Similarity=0.152  Sum_probs=48.2

Q ss_pred             CCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCc-hhhhh-----CC
Q 018618           37 GGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQ-LENAL-----TG  109 (353)
Q Consensus        37 ~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d-~~~al-----~~  109 (353)
                      +-++..+|.|+|+ |.+|...+..+...|. ..|+.+|.++ ....+.++--.   ..+. ....++ .++..     .+
T Consensus        24 ~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~-~~Vi~~d~~~~kl~~a~~lGa~---~~i~-~~~~d~~~~~~~~~~~~~G   97 (174)
T d1p0fa2          24 KVTPGSTCAVFGL-GGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKAIELGAT---ECLN-PKDYDKPIYEVICEKTNGG   97 (174)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHHTTCS---EEEC-GGGCSSCHHHHHHHHTTSC
T ss_pred             CCCCCCEEEEECC-CchhHHHHHHHHHcCC-ceeeccCChHHHHHHHHHcCCc---EEEc-CCCchhHHHHHHHHhcCCC
Confidence            3455679999998 9999999988887774 4899999987 33344433211   1111 111111 22222     47


Q ss_pred             CcEEEEcCCC
Q 018618          110 MDLVIIPAGV  119 (353)
Q Consensus       110 ADiVIi~ag~  119 (353)
                      .|+||.+.|.
T Consensus        98 ~d~vid~~g~  107 (174)
T d1p0fa2          98 VDYAVECAGR  107 (174)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEEcCCC
Confidence            9999998763

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.46  E-value=0.18  Score=43.57  Aligned_cols=31  Identities=23%  Similarity=0.333  Sum_probs=28.5

Q ss_pred             EEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           44 VAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        44 I~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |+|||| |..|.+.|..|++.|+  +|.++|..+
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~--~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGL--NVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCC--CEEEEecCC
Confidence            789999 9999999999999998  899999754

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=87.34  E-value=2  Score=33.72  Aligned_cols=96  Identities=16%  Similarity=0.205  Sum_probs=54.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcH-HHHHHHhcCCCCCeEEEEeCCCchhhhh-----CCCcEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTP-GVTADISHMDTGAVVRGFLGQPQLENAL-----TGMDLV  113 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~-~~~~dl~~~~~~~~v~~~~~t~d~~~al-----~~ADiV  113 (353)
                      +...|.|+|+ |.+|...+..+...+. ..++..|.++.+ ..+.++   .. ..+-.. ..+++++.+     .+.|+|
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~-~~vv~~~~~~~k~~~~~~~---ga-~~~i~~-~~~~~~~~~~~~~~~g~d~v  104 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTP-ATVIALDVKEEKLKLAERL---GA-DHVVDA-RRDPVKQVMELTRGRGVNVA  104 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCC-CEEEEEESSHHHHHHHHHT---TC-SEEEET-TSCHHHHHHHHTTTCCEEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcC-cccccccchhHHHHHHhhc---cc-ceeecC-cccHHHHHHHhhCCCCceEE
Confidence            3458999998 9999998888776664 278888987622 122222   11 111111 112222222     468999


Q ss_pred             EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHhhCCCcEEEEecCCC
Q 018618          114 IIPAGVPRKPGMTRDDLFNINAGIVRTLCEG-IAKCCPNATVNLISNPV  161 (353)
Q Consensus       114 Ii~ag~~~~~g~~r~~~~~~N~~i~~~i~~~-i~~~~p~a~viv~tNPv  161 (353)
                      |.+.|.+                   ...+. +.-..|.+.+++++.+.
T Consensus       105 id~~g~~-------------------~~~~~a~~~l~~~G~iv~~G~~~  134 (172)
T d1h2ba2         105 MDFVGSQ-------------------ATVDYTPYLLGRMGRLIIVGYGG  134 (172)
T ss_dssp             EESSCCH-------------------HHHHHGGGGEEEEEEEEECCCSS
T ss_pred             EEecCcc-------------------hHHHHHHHHHhCCCEEEEEeCcc
Confidence            9987632                   11222 33334788888887543

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.32  E-value=0.36  Score=39.01  Aligned_cols=77  Identities=16%  Similarity=0.202  Sum_probs=44.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhc-CC----CCCeEE-----EEeCCCchhhhhCCCc
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISH-MD----TGAVVR-----GFLGQPQLENALTGMD  111 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~-~~----~~~~v~-----~~~~t~d~~~al~~AD  111 (353)
                      +||+|.|- |.+|..++..+..++...-+.+.|..+......-+.. ..    ....+.     .+....++.+.+.++|
T Consensus         3 irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD   81 (172)
T d2czca2           3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD   81 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred             EEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCC
Confidence            69999999 9999999988887765434445565442211110111 11    000000     0111245667788999


Q ss_pred             EEEEcCCC
Q 018618          112 LVIIPAGV  119 (353)
Q Consensus       112 iVIi~ag~  119 (353)
                      +||.+.|.
T Consensus        82 vViEcTG~   89 (172)
T d2czca2          82 IIVDATPG   89 (172)
T ss_dssp             EEEECCST
T ss_pred             EEEECCCC
Confidence            99998763

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.15  E-value=0.24  Score=38.74  Aligned_cols=31  Identities=29%  Similarity=0.305  Sum_probs=26.2

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|||| |++|..+|..|.+ +.  ++.+++..+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~~-~~--~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLSQ-TY--EVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TS--EEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHHc-CC--CEEEEeccc
Confidence            8999999 9999999998864 33  899998654

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=87.09  E-value=0.14  Score=41.33  Aligned_cols=34  Identities=26%  Similarity=0.230  Sum_probs=29.3

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ..+|+|||+ |..|..-|..+++.++  +++++|...
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~--~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANL--QPVLITGME   38 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTC--CCEEECCSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCC--ceEEEEeec
Confidence            348999999 9999999999999888  888998643

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=86.83  E-value=0.14  Score=39.17  Aligned_cols=35  Identities=23%  Similarity=0.388  Sum_probs=27.2

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+|+|+|| |..|..++..+....-..=+.++|.++
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~   38 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDP   38 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCT
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCch
Confidence            48999999 999999987665444344678899876

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.78  E-value=0.39  Score=37.90  Aligned_cols=35  Identities=20%  Similarity=0.228  Sum_probs=29.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   76 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~   76 (353)
                      ..+|+|||| |.+|.-+|..|...+.-.+|++++..
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~~   37 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGDA   37 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecCc
Confidence            458999999 99999999999998875567776654

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=85.47  E-value=0.27  Score=41.55  Aligned_cols=32  Identities=22%  Similarity=0.222  Sum_probs=29.9

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .|.|||| |..|...|..|++.|.  ++.|+|.++
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~--~V~vlEk~~   37 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGK--SVTVFDNGK   37 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCC--cEEEEecCC
Confidence            6999999 9999999999999998  899999876

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=85.42  E-value=0.27  Score=42.87  Aligned_cols=32  Identities=28%  Similarity=0.344  Sum_probs=27.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHh-----CCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKI-----NPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~-----~~~~~el~L~D~~~   77 (353)
                      -|+|||| |.+|.++|..|++     .|+  +++++|..+
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~--~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDL--KVRIIDKRS   45 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCC--cEEEEcCCC
Confidence            5899999 9999999999974     577  899999764

>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: Dhaf3308-like
family: Dhaf3308-like
domain: Hypothetical protein Dhaf 3308
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=85.07  E-value=0.72  Score=39.45  Aligned_cols=116  Identities=23%  Similarity=0.250  Sum_probs=69.0

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEEcCCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVP  120 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi~ag~~  120 (353)
                      ..||++||-   +  -....+...+.  ++..+|.++..+   |+            . ...-++.+..||+||+|+.  
T Consensus       122 g~kV~vIG~---~--P~v~~l~~~~~--~~~VlE~~p~~g---d~------------p-~~~~~~lLp~aD~viiTGs--  176 (251)
T d2h1qa1         122 GKKVGVVGH---F--PHLESLLEPIC--DLSILEWSPEEG---DY------------P-LPASEFILPECDYVYITCA--  176 (251)
T ss_dssp             TSEEEEESC---C--TTHHHHHTTTS--EEEEEESSCCTT---CE------------E-GGGHHHHGGGCSEEEEETH--
T ss_pred             CCEEEEEec---c--hhHHHHHhcCC--cEEEEeCCCCCC---CC------------C-chHHHHhhhcCCEEEEEec--
Confidence            359999986   2  34445566665  899999875211   11            0 1234678999999999962  


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCCCchhHHHHHHHHHhCCCCCCceEeechhhHHHHHHHHHH
Q 018618          121 RKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPVNSTVPIAAEVFKKAGTYDPKKLLGVTMLDVVRANTFVAE  200 (353)
Q Consensus       121 ~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv~~~t~~~~~~~~~~~~~~~~kviG~t~ld~~R~~~~lA~  200 (353)
                                     -++..-.+.+-++++++..+++.=|...+.+.+   + + .|.  +.+=|+...|..++.+.+++
T Consensus       177 ---------------TlvN~Tl~~LL~~~~~a~~vvl~GPS~p~~P~l---f-~-~Gv--~~lag~~v~d~~~~~~~i~~  234 (251)
T d2h1qa1         177 ---------------SVVDKTLPRLLELSRNARRITLVGPGTPLAPVL---F-E-HGL--QELSGFMVKDNARAFRIVAG  234 (251)
T ss_dssp             ---------------HHHHTCHHHHHHHTTTSSEEEEESTTCCCCGGG---G-G-TTC--SEEEEEEESCHHHHHHHHTT
T ss_pred             ---------------hhhcCCHHHHHHhCCcCCEEEEECCCcccCHHH---H-h-cCC--ceEeEEEEeCHHHHHHHHHc
Confidence                           223334445556677765455555555565532   2 2 232  33445567888888888865


Q ss_pred             HhC
Q 018618          201 VLG  203 (353)
Q Consensus       201 ~l~  203 (353)
                      --+
T Consensus       235 Ggg  237 (251)
T d2h1qa1         235 AEK  237 (251)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            433

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=85.04  E-value=0.41  Score=35.52  Aligned_cols=36  Identities=14%  Similarity=0.047  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~   77 (353)
                      |.||+|||| |++|.-+|..+... ....+|.+++..+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            469999999 99999999766543 2344999998765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=84.54  E-value=1.5  Score=34.51  Aligned_cols=37  Identities=24%  Similarity=0.351  Sum_probs=30.1

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ++..+|.|+|+ |-+|...+..++..+. ..|+..|.++
T Consensus        27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~-~~Vi~~~~~~   63 (176)
T d2jhfa2          27 TQGSTCAVFGL-GGVGLSVIMGCKAAGA-ARIIGVDINK   63 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSCG
T ss_pred             CCCCEEEEECC-CCcHHHHHHHHHHcCC-ceEEeecCcH
Confidence            44568999999 7799998888887764 3899999887

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.34  E-value=0.38  Score=39.29  Aligned_cols=32  Identities=13%  Similarity=0.065  Sum_probs=29.0

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      -|+|||| |..|...|..+.+.|.  ++.++|.+.
T Consensus         4 DvvVIG~-G~aG~~aA~~a~~~G~--kV~iiE~~~   35 (217)
T d1gesa1           4 DYIAIGG-GSGGIASINRAAMYGQ--KCALIEAKE   35 (217)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTC--CEEEEESSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC--EEEEEeccC
Confidence            4899999 9999999999999998  899999765

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=84.30  E-value=0.35  Score=38.40  Aligned_cols=36  Identities=25%  Similarity=0.432  Sum_probs=24.6

Q ss_pred             CCCeEEEEcCCCCcHHHHH-HHHHhCCCCcEEEEE-eCCC
Q 018618           40 AGFKVAILGAAGGIGQPLA-MLMKINPLVSVLHLY-DVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la-~~l~~~~~~~el~L~-D~~~   77 (353)
                      +++||+|+|+ |.+|..+. ..|...+.. ||+.+ |++.
T Consensus         3 kkirvaIIGa-G~ig~~~~~~~l~~~~~~-el~avas~~~   40 (157)
T d1nvmb1           3 QKLKVAIIGS-GNIGTDLMIKVLRNAKYL-EMGAMVGIDA   40 (157)
T ss_dssp             SCEEEEEECC-SHHHHHHHHHHHHHCSSE-EEEEEECSCT
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHhhCCcc-eEEEEEecch
Confidence            3579999997 99998754 444444544 66555 7665

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=84.23  E-value=0.51  Score=35.09  Aligned_cols=36  Identities=17%  Similarity=0.069  Sum_probs=28.1

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCC-CCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINP-LVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~-~~~el~L~D~~~   77 (353)
                      |.+|+|+|| |++|.-+|..+...+ ...++.+++..+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            469999999 999999997765433 234899999765

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.04  E-value=0.3  Score=39.51  Aligned_cols=33  Identities=18%  Similarity=0.239  Sum_probs=28.8

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+|+|||| |..|...|..++..|+  +++++|...
T Consensus         6 ~~VvIIGg-GpaGl~aA~~~ar~g~--~v~vie~~~   38 (192)
T d1vdca1           6 TRLCIVGS-GPAAHTAAIYAARAEL--KPLLFEGWM   38 (192)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTC--CCEEECCSS
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCC--cEEEEEeec
Confidence            58999999 9999999999999888  788888543

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=83.87  E-value=0.37  Score=41.28  Aligned_cols=32  Identities=22%  Similarity=0.340  Sum_probs=28.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhC-CCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKIN-PLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~-~~~~el~L~D~~~   77 (353)
                      -|+|||| |..|...|..|++. |+  +++++|..+
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~--~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNV--QVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTS--CEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCC--eEEEEecCC
Confidence            5999999 99999999999874 88  999999865

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.46  E-value=0.42  Score=39.16  Aligned_cols=32  Identities=19%  Similarity=0.145  Sum_probs=29.3

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      -|+|||| |..|.+.|..+++.|.  +++++|..+
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~--kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGF--NTACVEKRG   38 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTC--CEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC--cEEEEEecC
Confidence            5899999 9999999999999998  999999765

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.44  E-value=0.62  Score=36.01  Aligned_cols=35  Identities=20%  Similarity=0.343  Sum_probs=25.4

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      ||+|+|++|.+|+.++..+...+...=+.-+|..+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~   35 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD   35 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence            89999999999999998877765332234456543

>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Pyrococcus abyssi [TaxId: 29292]

Probab=83.43  E-value=1.7  Score=33.80  Aligned_cols=69  Identities=20%  Similarity=0.322  Sum_probs=46.6

Q ss_pred             CCeEEEEcCC--CCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcCCCCCeEEEEeCCCchhhhhCCCcEEEE
Q 018618           41 GFKVAILGAA--GGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVII  115 (353)
Q Consensus        41 ~~KI~IiGa~--G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~~~~~~v~~~~~t~d~~~al~~ADiVIi  115 (353)
                      ..||+++|=.  +.|..+++..+...|.  +++++-...   .......+...  ...+..+   .|+++++++||+|..
T Consensus         4 gl~i~~vGD~~~srV~~Sli~~~~~~g~--~~~~~~P~~~~~~~~~~~~~~~~--~~~~~~~---~d~~~av~~aDvvy~   76 (157)
T d1ml4a2           4 GLKIGLLGDLKYGRTVHSLAEALTFYDV--ELYLISPELLRMPRHIVEELREK--GMKVVET---TTLEDVIGKLDVLYV   76 (157)
T ss_dssp             SEEEEEESCTTTCHHHHHHHHHGGGSCE--EEEEECCGGGCCCHHHHHHHHHT--TCCEEEE---SCTHHHHTTCSEEEE
T ss_pred             CCEEEEEcCCccChHHHHHHHHHHhcCC--cEEEEccchhhcchHHHHHHHhh--cccceee---cCHHHhhccCcEEEe
Confidence            4699999973  4678888888877776  888888755   22222223222  2344443   578899999998887


Q ss_pred             c
Q 018618          116 P  116 (353)
Q Consensus       116 ~  116 (353)
                      +
T Consensus        77 ~   77 (157)
T d1ml4a2          77 T   77 (157)
T ss_dssp             C
T ss_pred             e
Confidence            6

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=83.30  E-value=1.6  Score=34.16  Aligned_cols=76  Identities=18%  Similarity=0.203  Sum_probs=45.9

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCchhhhh-----CCCc
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQLENAL-----TGMD  111 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~~~al-----~~AD  111 (353)
                      -++..+|.|.|+ |-+|...+..++..|. ..|+..|.++ ....+.++--.   ..+......++.++.+     .++|
T Consensus        26 ~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~-~~vi~~~~~~~k~~~ak~lGa~---~~i~~~~~~~~~~~~~~~~~~~g~D  100 (176)
T d2fzwa2          26 LEPGSVCAVFGL-GGVGLAVIMGCKVAGA-SRIIGVDINKDKFARAKEFGAT---ECINPQDFSKPIQEVLIEMTDGGVD  100 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHHHTCS---EEECGGGCSSCHHHHHHHHTTSCBS
T ss_pred             CCCCCEEEEecc-hhHHHHHHHHHHHHhc-CceEEEcccHHHHHHHHHhCCc---EEEeCCchhhHHHHHHHHHcCCCCc
Confidence            445568999998 7899998888877764 3788888876 33344444311   1111100112222222     6799


Q ss_pred             EEEEcCC
Q 018618          112 LVIIPAG  118 (353)
Q Consensus       112 iVIi~ag  118 (353)
                      +||.+.|
T Consensus       101 ~vid~~G  107 (176)
T d2fzwa2         101 YSFECIG  107 (176)
T ss_dssp             EEEECSC
T ss_pred             EeeecCC
Confidence            9999876

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=83.28  E-value=0.42  Score=37.75  Aligned_cols=37  Identities=24%  Similarity=0.215  Sum_probs=28.4

Q ss_pred             CCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           41 GFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        41 ~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      |++|+|+|++|++|.+...-+.+.+-.-+|+.+-.+.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            5799999999999999888777764323677666554

>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: GTPase domain of the signal sequence recognition protein Ffh
species: Archaeon Acidianus ambivalens [TaxId: 2283]

Probab=83.18  E-value=8  Score=31.61  Aligned_cols=35  Identities=17%  Similarity=0.293  Sum_probs=18.4

Q ss_pred             CCCeEEEEcCCCCcHHHH-----HHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAAGGIGQPL-----AMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~l-----a~~l~~~~~~~el~L~D~~~   77 (353)
                      +|.-|.++|.+| +|-+.     |..+...+.  .|.++-.+.
T Consensus        11 ~p~vi~lvGptG-vGKTTTiAKLA~~~~~~g~--kV~lit~Dt   50 (211)
T d1j8yf2          11 IPYVIMLVGVQG-TGKATTAGKLAYFYKKKGF--KVGLVGADV   50 (211)
T ss_dssp             SSEEEEEECSCC-C----HHHHHHHHHHHTTC--CEEEEECCC
T ss_pred             CCEEEEEECCCC-CCHHHHHHHHHHHHHHCCC--ceEEEEeec
Confidence            344577789855 67664     345555665  566666554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=82.98  E-value=2.1  Score=33.51  Aligned_cols=75  Identities=16%  Similarity=0.153  Sum_probs=44.7

Q ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC-cHHHHHHHhcCCCCCeEEEEeCCCch-hhhh-----CCC
Q 018618           38 GAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN-TPGVTADISHMDTGAVVRGFLGQPQL-ENAL-----TGM  110 (353)
Q Consensus        38 ~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~-~~~~~~dl~~~~~~~~v~~~~~t~d~-~~al-----~~A  110 (353)
                      -++..+|+|+|+ |-+|...+..++..+- .+|+.+|.++ ....+.++-   ....+. .....++ ++..     .++
T Consensus        26 ~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~-~~Vi~~~~~~~rl~~a~~~G---Ad~~in-~~~~~~~~~~~~~~~~~~G~   99 (175)
T d1cdoa2          26 VEPGSTCAVFGL-GAVGLAAVMGCHSAGA-KRIIAVDLNPDKFEKAKVFG---ATDFVN-PNDHSEPISQVLSKMTNGGV   99 (175)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHHTT---CCEEEC-GGGCSSCHHHHHHHHHTSCB
T ss_pred             CCCCCEEEEEec-CCccchHHHHHHHHhh-chheeecchHHHHHHHHHcC---CcEEEc-CCCcchhHHHHHHhhccCCc
Confidence            345568999998 8888888877776653 3899999877 333344332   111111 1111111 1111     589


Q ss_pred             cEEEEcCC
Q 018618          111 DLVIIPAG  118 (353)
Q Consensus       111 DiVIi~ag  118 (353)
                      |+|+.+.|
T Consensus       100 d~vid~~G  107 (175)
T d1cdoa2         100 DFSLECVG  107 (175)
T ss_dssp             SEEEECSC
T ss_pred             ceeeeecC
Confidence            99999976

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.60  E-value=0.57  Score=35.88  Aligned_cols=35  Identities=20%  Similarity=0.197  Sum_probs=27.1

Q ss_pred             CeEEEEcCCCCcHHHHHHHHHhC--CCCcEEEEEeCCC
Q 018618           42 FKVAILGAAGGIGQPLAMLMKIN--PLVSVLHLYDVVN   77 (353)
Q Consensus        42 ~KI~IiGa~G~vG~~la~~l~~~--~~~~el~L~D~~~   77 (353)
                      .+|+|||| |++|.-+|..|...  ....++.+++..+
T Consensus        38 k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          38 KSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            48999999 99999999877542  1223999999865

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=81.96  E-value=0.47  Score=37.67  Aligned_cols=32  Identities=16%  Similarity=0.222  Sum_probs=26.5

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDV   75 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~   75 (353)
                      ||+|||+ |++|..+|..|.+.+.-.+|++++.
T Consensus         5 ~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~~~   36 (183)
T d1d7ya1           5 PVVVLGA-GLASVSFVAELRQAGYQGLITVVGD   36 (183)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHTCCSCEEEEES
T ss_pred             CEEEECc-cHHHHHHHHHHHhcCCceEEEEEec
Confidence            7999999 9999999999988776446666654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=81.73  E-value=1.9  Score=34.23  Aligned_cols=99  Identities=13%  Similarity=0.124  Sum_probs=58.7

Q ss_pred             cCCCCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCcHHHHHHHhcCCCCCeEEEEeCCCchhhh-h-----CC
Q 018618           36 KGGAAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENA-L-----TG  109 (353)
Q Consensus        36 ~~~~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~~~~~~dl~~~~~~~~v~~~~~t~d~~~a-l-----~~  109 (353)
                      .+-++...|.|.||+|.||+..+...+..|.  +++..+.++.+  ...+..... ..+-.. .++++.+. +     ++
T Consensus        25 ~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga--~vi~~~~~~~~--~~~~~~~Ga-~~vi~~-~~~~~~~~~~~~~~~~G   98 (182)
T d1v3va2          25 CGVKGGETVLVSAAAGAVGSVVGQIAKLKGC--KVVGAAGSDEK--IAYLKQIGF-DAAFNY-KTVNSLEEALKKASPDG   98 (182)
T ss_dssp             TCCCSSCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHH--HHHHHHTTC-SEEEET-TSCSCHHHHHHHHCTTC
T ss_pred             hCCCCCCEEEEEeCCCchhHHHHHHHHccCC--EEEEeCCCHHH--HHHHHhhhh-hhhccc-ccccHHHHHHHHhhcCC
Confidence            3345567899999989999999999998887  87877765422  111222221 222111 22232222 2     67


Q ss_pred             CcEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecC
Q 018618          110 MDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISN  159 (353)
Q Consensus       110 ADiVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tN  159 (353)
                      .|+|+-+.|.                +.+.   ..+....|++.++++++
T Consensus        99 vd~v~D~vG~----------------~~~~---~~~~~l~~~G~~v~~G~  129 (182)
T d1v3va2          99 YDCYFDNVGG----------------EFLN---TVLSQMKDFGKIAICGA  129 (182)
T ss_dssp             EEEEEESSCH----------------HHHH---HHGGGEEEEEEEEECCC
T ss_pred             CceeEEecCc----------------hhhh---hhhhhccCCCeEEeecc
Confidence            9999998651                1122   23333458888888865

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.47  E-value=0.49  Score=42.84  Aligned_cols=32  Identities=31%  Similarity=0.389  Sum_probs=28.6

Q ss_pred             eEEEEcCCCCcHHHHHHHHHh------CCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKI------NPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~------~~~~~el~L~D~~~   77 (353)
                      -|+|||| |..|++.|..|++      .|+  +|+|+|...
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl--~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDL--RVCLVEKAA   71 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCC--CEEEECSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCC--EEEEEcCCC
Confidence            6999999 9999999999986      677  999999864

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=81.37  E-value=0.44  Score=38.81  Aligned_cols=32  Identities=19%  Similarity=0.121  Sum_probs=28.9

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      -|+|||| |..|.+.|..+++.|.  +++++|..+
T Consensus         5 DvvVIGg-GpaGl~aA~~aa~~G~--kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGG-GPGGYVAAIKAAQLGF--KTTCIEKRG   36 (221)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTC--CEEEEECSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCC--cEEEEEecC
Confidence            5899999 9999999999999888  899999764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=81.35  E-value=0.55  Score=37.00  Aligned_cols=31  Identities=23%  Similarity=0.259  Sum_probs=27.4

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVV   76 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~   76 (353)
                      -|+|||| |..|...|..+.+.|+  +++++|.+
T Consensus         3 DViIIGg-GpaGl~AAi~aar~G~--~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGS-GPAGAAAAIYSARKGI--RTGLMGER   33 (184)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTTTC--CEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHcCC--eEEEEEEe
Confidence            4899999 9999999999999998  88888853

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.20  E-value=0.52  Score=40.59  Aligned_cols=32  Identities=22%  Similarity=0.294  Sum_probs=29.7

Q ss_pred             eEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           43 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        43 KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      -|+|||+ |..|.+.|..|++.|.  +|+|+|...
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~--~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGA--KVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTC--CEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCC--cEEEEecCC
Confidence            6999999 9999999999999998  899999865

>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.68  E-value=1.5  Score=34.72  Aligned_cols=73  Identities=15%  Similarity=0.140  Sum_probs=41.8

Q ss_pred             CCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCC---cHHHHHHHhcC--CCCCeEEEEeCCCchhhhhCCCcEEE
Q 018618           40 AGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVN---TPGVTADISHM--DTGAVVRGFLGQPQLENALTGMDLVI  114 (353)
Q Consensus        40 ~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~---~~~~~~dl~~~--~~~~~v~~~~~t~d~~~al~~ADiVI  114 (353)
                      +..||+++|-...|..+++..+...|.  ++.++-...   ......+....  ..+..+..+   .|..+++++||+|.
T Consensus         3 ~gl~I~~vGD~~nV~~Sli~~~~~~g~--~~~~~~P~~~~p~~~~~~~~~~~~~~~~~~i~~~---~d~~~~~~~advi~   77 (170)
T d1otha2           3 KGLTLSWIGDGNNILHSIMMSAAKFGM--HLQAATPKGYEPDASVTKLAEQYAKENGTKLLLT---NDPLEAAHGGNVLI   77 (170)
T ss_dssp             TTCEEEEESCSSHHHHHHHTTTGGGTC--EEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEE---SCHHHHHTTCSEEE
T ss_pred             CCCEEEEEcCchhHHHHHHHHHHHcCC--EEEEEeccccCCchHHHHHHHHHHhccCCEEEEE---cCHHHHHhhhhhee
Confidence            356999999832333333333333455  888888754   12111111111  012445543   57889999999999


Q ss_pred             EcC
Q 018618          115 IPA  117 (353)
Q Consensus       115 i~a  117 (353)
                      ...
T Consensus        78 ~~~   80 (170)
T d1otha2          78 TDT   80 (170)
T ss_dssp             ECC
T ss_pred             eec
Confidence            874

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.14  E-value=1.3  Score=34.87  Aligned_cols=97  Identities=15%  Similarity=0.143  Sum_probs=57.1

Q ss_pred             CCCCeEEEEcCCCCcHHHHHHHHHhCCCCcEEEEEeCCCc-HHHHHHHhcCCCCCeEEEEeCCCchhhhh------CCCc
Q 018618           39 AAGFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNT-PGVTADISHMDTGAVVRGFLGQPQLENAL------TGMD  111 (353)
Q Consensus        39 ~~~~KI~IiGa~G~vG~~la~~l~~~~~~~el~L~D~~~~-~~~~~dl~~~~~~~~v~~~~~t~d~~~al------~~AD  111 (353)
                      ++..+|.|+||+|.||......+...|.  +++..+.++. ...+.+   ... ..+-.. .+.|+.+.+      ++.|
T Consensus        27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~--~vi~~~~~~~~~~~~~~---~Ga-~~vi~~-~~~~~~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          27 KAGESVLVHGASGGVGLAACQIARAYGL--KILGTAGTEEGQKIVLQ---NGA-HEVFNH-REVNYIDKIKKYVGEKGID   99 (174)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH---TTC-SEEEET-TSTTHHHHHHHHHCTTCEE
T ss_pred             CCCCEEEEEeccccccccccccccccCc--ccccccccccccccccc---cCc-cccccc-ccccHHHHhhhhhccCCce
Confidence            4456999999889999999888888887  7777775442 122222   211 122222 234554443      4589


Q ss_pred             EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecCCC
Q 018618          112 LVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNATVNLISNPV  161 (353)
Q Consensus       112 iVIi~ag~~~~~g~~r~~~~~~N~~i~~~i~~~i~~~~p~a~viv~tNPv  161 (353)
                      +|+-+.|             .   +.+.+..+.   ..|.+.++.++++.
T Consensus       100 ~v~d~~g-------------~---~~~~~~~~~---l~~~G~iv~~G~~~  130 (174)
T d1yb5a2         100 IIIEMLA-------------N---VNLSKDLSL---LSHGGRVIVVGSRG  130 (174)
T ss_dssp             EEEESCH-------------H---HHHHHHHHH---EEEEEEEEECCCCS
T ss_pred             EEeeccc-------------H---HHHHHHHhc---cCCCCEEEEEecCC
Confidence            8888753             1   112222233   34788888886543

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.04  E-value=6.5  Score=29.44  Aligned_cols=37  Identities=14%  Similarity=0.131  Sum_probs=28.4

Q ss_pred             CCCeEEEEcCC---CCcHHHHHHHHHhCCCCcEEEEEeCCC
Q 018618           40 AGFKVAILGAA---GGIGQPLAMLMKINPLVSVLHLYDVVN   77 (353)
Q Consensus        40 ~~~KI~IiGa~---G~vG~~la~~l~~~~~~~el~L~D~~~   77 (353)
                      .+..|+||||+   +..|..+...|...+ ..+|+.+....
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~-~g~v~pVnP~~   46 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYK-KGKVYPVNIKE   46 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCC-SSEEEEECSSC
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcC-CCcEEEeccCc
Confidence            45699999997   678888888876654 45889988753