Citrus Sinensis ID: 018627

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350---
Protein Sequence
MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCGNCA
Secondary Structure (PSIPRED)
cccccccccEEEEEEEEEEccccccEEEEEEEccccccEEEEEEEEEEccccccccccccccccccccccccEEEEEEcccccccccccEEEEcccccccccccccccccccccccccccccccccccccEEEEccEEEEEEEcccccccEEEEEccEEEEcccccccccEEEEcccccccccEEEEEcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccccHHHHHHHccccEEcccccccccHHHHHHHHccccccEEEEccccHHHHHHHHHHccccccEEEEEcccccccEEEcccccEEEccEEEEEEcccccccccHHHHHHHHHccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEccHHHHHHccccccccccEccccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccHHHHHccccccccccEEEccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHHHccccHHHHHHHHccccEcEEEEccccHHHHHHHHHcEcccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHcccccccccEEcccc
Coil and Loop (DISEMBL)
mstsikqpqvITCKAAvawgagqplvveevevnppqpeeirIKVVCTslcrsditawetqaifprifgheasgivesvgpgvtefnegeHVLTVFIGEcktcrqcksdksntcevlglerrgvmhsdqqtrfsikgkpvyhycavssfsEYTVVHSGcavkvssiaplEKICLLSCglsaglgaawnvadiskgsTVVIFGLGTVGLSVAQGakargasriigvdtnpekcekAKAFgvteflnpndnnepVQQVIKRITdggadysfecigdTGMITTALQSCCdgwglavtlgvpklkpevAAHYGLflsgrtlkgslfggwkpktdlpsLVNRYLKKvrntrkpscgnca
Flexible Loop (DISEMBL)
mstsikqpqvITCKAAVAWGAGQPLVVEEVevnppqpeeirIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECktcrqcksdksntcevlglerrgvmhsdqqtrfsikgkPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAqgakargasriigvdtnpeKCEKAKAFGvteflnpndnnepVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRtlkgslfggwkpktdlpslvnrylkkvrntrkpscgnca
Low Complexity Region (SEG)
MSTSIKQPQVITCKAAVAWGAGQplvveevevnppqpeeIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIcllscglsaglgaaWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCGNCA
Disordered region (IsUnstruct)
********QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN***EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLK**************
Disordered Region (DISOPRED)
******Q***ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCGN**
Disordered Region (DISEMBL)
********QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN**********
Disordered Region (DISPRO)
*******PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSC****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCGNCA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	353	2.2.26 [Sep-21-2011]
Q8LEB2	381	Alcohol dehydrogenase-lik	yes	no	0.960	0.889	0.766	1e-160
P25141	382	Alcohol dehydrogenase 1 O	N/A	no	0.940	0.869	0.581	1e-112
P14675	380	Alcohol dehydrogenase 3 O	N/A	no	0.957	0.889	0.566	1e-112
P14674	380	Alcohol dehydrogenase 2 O	N/A	no	0.940	0.873	0.571	1e-111
P14673	380	Alcohol dehydrogenase 1 O	N/A	no	0.957	0.889	0.563	1e-111
P00333	379	Alcohol dehydrogenase 1 O	N/A	no	0.957	0.891	0.555	1e-110
P14219	379	Alcohol dehydrogenase 1 O	N/A	no	0.957	0.891	0.561	1e-110
P28032	380	Alcohol dehydrogenase 2 O	N/A	no	0.957	0.889	0.555	1e-110
P48977	380	Alcohol dehydrogenase OS=	N/A	no	0.940	0.873	0.568	1e-110
Q2R8Z5	379	Alcohol dehydrogenase 1 O	no	no	0.957	0.891	0.555	1e-109

>sp|Q8LEB2|ADHL6_ARATH Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2

 Score =  566 bits (1458), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 260/339 (76%), Positives = 307/339 (90%)

Query: 2   STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA 61
           S+S +QPQVITC AAVAW AG+PLV+EEVEV+PPQP EIRIKVVCTSLCRSD++AWE+Q+
Sbjct: 5   SSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS 64

Query: 62  IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
           + PRIFGHEA+GIVES+G GVTEF +G+HVL VF GEC +CR C S KSN C+VLG+ER+
Sbjct: 65  LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERK 124

Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG 181
           G+MHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  +APL KICLLSCG++AG
Sbjct: 125 GLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAG 184

Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
           LGAAWNVAD+ KGS+VVIFGLGTVGLSVAQGAK RGA++I+GVD NP K E+AK FGVT+
Sbjct: 185 LGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTD 244

Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
           F+N ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK KP
Sbjct: 245 FINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKP 304

Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           EV+AHYGLFLSG++LKG+LFGGWKPK+DLPSL+++Y+ K
Sbjct: 305 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNK 343

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|P25141|ADH1_PETHY Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1

 Score =  406 bits (1043), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 196/337 (58%), Positives = 247/337 (73%), Gaps = 5/337 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
           QVI CKAAVAW AG+PLV+EEVEV PPQ  E+R+K++ TSLC +D+  WE +    +FPR
Sbjct: 8   QVIRCKAAVAWEAGKPLVIEEVEVAPPQKMEVRLKILFTSLCHTDVYFWEAKGQTPLFPR 67

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVM 124
           IFGHEA GIVESVG GVT+   G+HVL VF GEC+ CR CKS++SN C++L +   RGVM
Sbjct: 68  IFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECQQCRHCKSEESNMCDLLRINTDRGVM 127

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
             D QTRFS  GKP+YH+   S+FSEYTV HSGC  K+   APL+K+C+LSCG+S GLGA
Sbjct: 128 IHDGQTRFSKDGKPIYHFVGTSTFSEYTVCHSGCVTKIDPQAPLDKVCVLSCGISTGLGA 187

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
             NVA  +KGSTV IFGLG VGL+ A+GA+  GASRIIGVD NP +   AK FGVTEF+N
Sbjct: 188 TLNVAKPTKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFNDAKKFGVTEFVN 247

Query: 245 PNDN-NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
           P D+ ++PVQQVI  +TDGG D S EC G+   + +A +   DGWG+AV +GVP      
Sbjct: 248 PKDHGDKPVQQVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAF 307

Query: 304 AAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
             H    L+ RTLKG+ FG +KPK+D+PS+V++Y+KK
Sbjct: 308 KTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKK 344

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1

 Score =  404 bits (1038), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/344 (56%), Positives = 253/344 (73%), Gaps = 6/344 (1%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
           MST++ Q  VI CKAAVAW AG+PLV+EEV+V PPQ  E+R+K++ TSLC +D+  WE +
Sbjct: 1   MSTTVGQ--VIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAK 58

Query: 61  A---IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG 117
               +FPRI GHEA+GIVESVG GVTE   G+HVL VF GECK C  CKS++SN C +L 
Sbjct: 59  GQNPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLR 118

Query: 118 LE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC 176
           +   RGVM +D Q+RFSI GKP+YH+   S+FSEYTVVH GC  K++ +APL+K+C+LSC
Sbjct: 119 INTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSC 178

Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
           G+S GLGA  NVA  +KGS+V IFGLG VGL+ A+GA+  GASRIIGVD N  + E+AK 
Sbjct: 179 GISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKK 238

Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
           FGVTEF+NP D ++PVQ+VI  +TDGG D S EC G    + +A +   DGWG+AV +GV
Sbjct: 239 FGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298

Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           P  +     H   FL+ RTLKG+ FG +KP++D+PS+V +Y+ K
Sbjct: 299 PHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNK 342

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1

 Score =  403 bits (1035), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 192/336 (57%), Positives = 248/336 (73%), Gaps = 4/336 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
           QVI CKAAVAW AG+PLV+EEV+V PPQ  E+R+K++ TSLC +D+  WE +    +FPR
Sbjct: 7   QVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQNPVFPR 66

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVM 124
           I GHEA+GIVESVG GVTE   G+HVL VF GECK C  CKS++SN C +L +   RGVM
Sbjct: 67  ILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRINTDRGVM 126

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
            +D Q+RFSI GKP+YH+   S+FSEYTVVH GC  K++ +APL+K+C+LSCG+S GLGA
Sbjct: 127 INDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGISTGLGA 186

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
             NVA  +KGS+V IFGLG VGL+ A+GA+  GASRIIGVD N  + E+AK FGVTEF+N
Sbjct: 187 TLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVN 246

Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
           P D ++PVQ+VI  +TDGG D S EC G    + +A +   DGWG+AV +GVP  +    
Sbjct: 247 PKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFK 306

Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
            H   FL+ RTLKG+ FG +KP++D+PS+V +Y+ K
Sbjct: 307 THPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNK 342

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1

 Score =  402 bits (1033), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 194/344 (56%), Positives = 252/344 (73%), Gaps = 6/344 (1%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
           MST++ Q  VI CKAAVAW AG+PLV+EEV+V PPQ  E+R+K++ TSLC +D+  WE +
Sbjct: 1   MSTTVGQ--VIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAK 58

Query: 61  A---IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG 117
               +FPRI GHEA+GIVESVG GVTE   G+HVL VF GECK C  CKS++SN C +L 
Sbjct: 59  GQNPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLR 118

Query: 118 LE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC 176
           +   RGVM +D Q+RFSI GKP+YH+   S+FSEYTVVH GC  K++ +APL+K+C+LSC
Sbjct: 119 INTDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSC 178

Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
           G+S GLGA  NVA  +KGS+V IFGLG VGL+ A+GA+  GASRIIGVD N  + E+AK 
Sbjct: 179 GISTGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKK 238

Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
           FGVTEF+NP D ++PVQ+VI  +TDGG D S EC G    + +A +   DGWG+AV +GV
Sbjct: 239 FGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298

Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           P  +     H    L+ RTLKG+ FG +KP++D+PS+V +Y+ K
Sbjct: 299 PHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNK 342

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P00333|ADH1_MAIZE Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1

 Score =  398 bits (1023), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/342 (55%), Positives = 247/342 (72%), Gaps = 4/342 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
           +VI CKAAVAW AG+PL +EEVEV PPQ  E+R+K++ TSLC +D+  WE +    +FPR
Sbjct: 6   KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPR 65

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVM 124
           IFGHEA GI+ESVG GVT+   G+HVL VF GECK C  CKS +SN C++L +   RGVM
Sbjct: 66  IFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVM 125

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
            +D ++RFSI GKP+YH+   S+FSEYTV+H GC  K++  APL+K+C+LSCG S GLGA
Sbjct: 126 IADGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGYSTGLGA 185

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
           + NVA   KGSTV +FGLG VGL+ A+GA+  GASRIIGVD NP + E+A+ FG TEF+N
Sbjct: 186 SINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVN 245

Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
           P D+N+PVQ+V+  +T+GG D S EC G+   +  A +   DGWG+AV +GVP    E  
Sbjct: 246 PKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFK 305

Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRK 346
            H   FL+ RTLKG+ FG +KP+TDLP++V  Y+KK     K
Sbjct: 306 THPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEK 347

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14219|ADH1_PENAM Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1

 Score =  398 bits (1023), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 192/342 (56%), Positives = 247/342 (72%), Gaps = 4/342 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
           +VI CKAAVAW AG+PL +EEVEV PPQ  E+R+K++ TSLC +D+  WE +    +FPR
Sbjct: 6   KVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTSLCHTDVYFWEAKGQTPVFPR 65

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
           IFGHEA GI+ESVG GVT+   G+HVL VF GECK C  CKS +SN C++L +   RGVM
Sbjct: 66  IFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTVRGVM 125

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
             D ++RFSI GKP+YH+   S+FSEYTV+H GC  K++  APL+K+C+LSCG+S GLGA
Sbjct: 126 IGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGISTGLGA 185

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
           + NVA   KGSTV IFGLG VGL+ A+GA+  GASRIIGVD NP + E+AK FG TEF+N
Sbjct: 186 SINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCTEFVN 245

Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
           P D+N+PVQ+V+  +T+GG D S EC G+   +  A +   DGWG+AV +GVP    E  
Sbjct: 246 PKDHNKPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFK 305

Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRK 346
            H   FL+ RTLKG+ FG +KP+TDLP++V  Y+KK     K
Sbjct: 306 THPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEK 347

Pennisetum americanum (taxid: 4543)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P28032|ADH2_SOLLC Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2

 Score =  397 bits (1021), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/344 (55%), Positives = 252/344 (73%), Gaps = 6/344 (1%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
           MST++ Q  VI CKAAVAW AG+PLV+EEV+V PPQ  E+R+K++ TSLC +D+  WE +
Sbjct: 1   MSTTVGQ--VIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAK 58

Query: 61  A---IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG 117
               +FPRI GHEA+GIVESVG GVT+   G+HVL VF GECK C  CKS++SN C +L 
Sbjct: 59  GQNPVFPRILGHEAAGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESNMCSLLR 118

Query: 118 LE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC 176
           +   RGVM +D ++RFSI G P+YH+   S+FSEYTVVH GC  K++ +APL+K+C+LSC
Sbjct: 119 INTDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSC 178

Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
           G+S GLGA+ NVA  +KGS+V IFGLG VGL+ A+GA+  GASRIIGVD N  + E+AK 
Sbjct: 179 GISTGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKK 238

Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
           FGVTEF+NP D ++PVQ+VI  +TDGG D S EC G    + +A +   DGWG+AV +GV
Sbjct: 239 FGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGV 298

Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           P  +     H   FL+ RTLKG+ FG +KP++D+P +V +Y+ K
Sbjct: 299 PHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNK 342

Solanum lycopersicum (taxid: 4081)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P48977|ADH_MALDO Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1

 Score =  397 bits (1021), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 191/336 (56%), Positives = 246/336 (73%), Gaps = 4/336 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
           QVI C+AAVAW AG+PLV+EEVEV PPQ  E+RIK++ TSLC +D+  WE +    +FPR
Sbjct: 7   QVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQNPLFPR 66

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVM 124
           I+GHEA GIVESVG GVT+   G+HVL VF GECK C  CKS++SN C++L +   RGVM
Sbjct: 67  IYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRINTDRGVM 126

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
            SD ++RFSIKGKP+YH+   S+FSEYTVVH GC  K++  APL+K+CLLSCG+S GLGA
Sbjct: 127 LSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGISTGLGA 186

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
             NVA   KGSTV +FGLG VGL+ A+GA+  GASRIIGVD + ++ E+AK FGVTEF+N
Sbjct: 187 TLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVN 246

Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
           P  + +PVQ+VI  +T+ G D S EC G T  + +A +   DGWG+AV +GVP       
Sbjct: 247 PKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFK 306

Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
            H   FL+ RTLKG+ FG +K +TD+PS+V +Y+ K
Sbjct: 307 THPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNK 342

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q2R8Z5|ADH1_ORYSJ Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2

 Score =  396 bits (1018), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 190/342 (55%), Positives = 245/342 (71%), Gaps = 4/342 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR 65
           +VI CKAAVAW A +PLV+EEVEV PPQ  E+R+K++ TSLC +D+  WE +    +FPR
Sbjct: 6   KVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTPVFPR 65

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVM 124
           IFGHEA GIVESVG GVT+   G+HVL VF GECK C  CKS +SN C++L +   RGVM
Sbjct: 66  IFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVM 125

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
             D ++RFSI GKP+YH+   S+FSEYTV+H GC  K++  APL+K+C+LSCG+S GLGA
Sbjct: 126 IGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGISTGLGA 185

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
             NVA   KGSTV IFGLG VGL+ A+GA+  GASRIIG+D N  + E+A+ FG TEF+N
Sbjct: 186 TINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVN 245

Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
           P D+++PVQQV+  +T+GG D S EC G+   +  A +   DGWG+AV +GVP    E  
Sbjct: 246 PKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFK 305

Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRK 346
            H   FL+ RTLKG+ FG +KP+TDLP++V  Y+KK     K
Sbjct: 306 THPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEK 347

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
224078958	378	predicted protein [Populus trichocarpa]	0.963	0.899	0.864	1e-174
255557120	369	Alcohol dehydrogenase, putative [Ricinus	0.966	0.924	0.829	1e-165
356531015	374	PREDICTED: alcohol dehydrogenase-like 6-	0.951	0.898	0.824	1e-165
225454573	379	PREDICTED: alcohol dehydrogenase-like 6	0.960	0.894	0.814	1e-164
449515985	379	PREDICTED: alcohol dehydrogenase-like 6-	0.943	0.878	0.822	1e-163
449469452	379	PREDICTED: alcohol dehydrogenase-like 6-	0.943	0.878	0.819	1e-163
359489892	383	PREDICTED: alcohol dehydrogenase-like 6	0.960	0.885	0.804	1e-163
357498987	377	Alcohol dehydrogenase [Medicago truncatu	0.943	0.883	0.816	1e-161
18420834	381	alcohol dehydrogenase-like 6 [Arabidopsi	0.960	0.889	0.766	1e-159
297812675	382	hypothetical protein ARALYDRAFT_489336 [	0.951	0.879	0.770	1e-158

>gi|224078958|ref|XP_002305695.1| predicted protein [Populus trichocarpa] gi|222848659|gb|EEE86206.1| predicted protein [Populus trichocarpa]

 Score =  616 bits (1588), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 294/340 (86%), Positives = 319/340 (93%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
           MS+SIKQP VITCKAAVAWGAG+ LV++EVEV+PP P+EIRIKVV TSLCRSDI+A ++ 
Sbjct: 1   MSSSIKQPNVITCKAAVAWGAGEALVMQEVEVSPPHPQEIRIKVVTTSLCRSDISALDSH 60

Query: 61  AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER 120
           AIFPRIFGHEASGIVES+G GVTEF EG+HVLTVF GECKTCRQC S KSN C+VLGLER
Sbjct: 61  AIFPRIFGHEASGIVESIGEGVTEFQEGDHVLTVFTGECKTCRQCMSGKSNMCQVLGLER 120

Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180
           RGVMHSDQ TRFSI GKPVYHYCAVSSFSEYTVVH+GCAVKVSS APLEKICLLSCGL+A
Sbjct: 121 RGVMHSDQGTRFSINGKPVYHYCAVSSFSEYTVVHTGCAVKVSSAAPLEKICLLSCGLAA 180

Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
           GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGA+ RGAS+IIGVDTNPEKC+KAK FG+T
Sbjct: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGARIRGASQIIGVDTNPEKCDKAKDFGIT 240

Query: 241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300
           EF+NPND NEP+QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGL VTLGVPK+K
Sbjct: 241 EFINPNDCNEPIQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLTVTLGVPKVK 300

Query: 301 PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           PEV+AHYGLFLSGRTLKGSLFGGWKPK+DLPSLV+ Y+ K
Sbjct: 301 PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDMYMNK 340

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557120|ref|XP_002519592.1| Alcohol dehydrogenase, putative [Ricinus communis] gi|223541250|gb|EEF42803.1| Alcohol dehydrogenase, putative [Ricinus communis]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 283/341 (82%), Positives = 312/341 (91%)

Query: 2   STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA 61
           ++SI    VITCKAAVAWG  + LV+EEVEV+PP P EIRIKVV TSLCRSDI+AWE+QA
Sbjct: 3   TSSINNNNVITCKAAVAWGPEEALVMEEVEVSPPHPYEIRIKVVSTSLCRSDISAWESQA 62

Query: 62  IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
           +FPRIFGHEASGIVESVG  VTEF EG+HVLTVF GEC+TCRQC S KSN C+VLGLERR
Sbjct: 63  LFPRIFGHEASGIVESVGEEVTEFGEGDHVLTVFTGECQTCRQCTSGKSNMCQVLGLERR 122

Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG 181
           GVMHSDQ+TRFSIKGK VYHYCAVSSFSEYTVVHSGCAVKV S APLEKICLLSCG++AG
Sbjct: 123 GVMHSDQRTRFSIKGKHVYHYCAVSSFSEYTVVHSGCAVKVGSAAPLEKICLLSCGVAAG 182

Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
           LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAK RGAS+IIGVDTNPEK EKAKAFG+T+
Sbjct: 183 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKLRGASQIIGVDTNPEKQEKAKAFGITQ 242

Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
           ++NPN  NEP+QQ+IK IT+GGADYSFEC+GD+GMITTALQ CCDGWGL VTLGVPKLKP
Sbjct: 243 YINPNKCNEPIQQLIKCITNGGADYSFECVGDSGMITTALQCCCDGWGLTVTLGVPKLKP 302

Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVR 342
           E++AHYGLFLSGRTLKGSLFGGWKPK+DLPSLV+ Y+KKV 
Sbjct: 303 EISAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDMYMKKVE 343

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531015|ref|XP_003534074.1| PREDICTED: alcohol dehydrogenase-like 6-like [Glycine max]

 Score =  587 bits (1513), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 277/336 (82%), Positives = 307/336 (91%)

Query: 5   IKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFP 64
           +  PQVITCKAAVAW AG+ LV+EEVEV+PPQP EIRIKVV TSLCRSD++AWE+ AIFP
Sbjct: 1   MSSPQVITCKAAVAWRAGEALVMEEVEVSPPQPMEIRIKVVSTSLCRSDLSAWESHAIFP 60

Query: 65  RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
           RIFGHEASGIVESVG GVTEF EG+HVLTVFIGEC +CRQC S KSNTC++LGLERRG+M
Sbjct: 61  RIFGHEASGIVESVGQGVTEFKEGDHVLTVFIGECMSCRQCTSGKSNTCQILGLERRGLM 120

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
           HSDQ+TRFS+KGKPVYHYCAVSSFSEYTVVHSGCAVKVS +APLEKICLLSCG++AGLGA
Sbjct: 121 HSDQKTRFSLKGKPVYHYCAVSSFSEYTVVHSGCAVKVSPLAPLEKICLLSCGVAAGLGA 180

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
           AWNVAD+SKGSTVVIFGLGTVGLSVAQ +K RGASRIIGVD NP+KCE AKAFGVTE ++
Sbjct: 181 AWNVADVSKGSTVVIFGLGTVGLSVAQASKLRGASRIIGVDNNPQKCENAKAFGVTEVVD 240

Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
           PN   EP+ QVIKRITDGGAD+SFEC+GDT  ITTALQSCCDGWGL VTLGVPK+KPE++
Sbjct: 241 PNSYKEPIAQVIKRITDGGADFSFECVGDTDTITTALQSCCDGWGLTVTLGVPKVKPEMS 300

Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           AHYGL L GRTLKGSLFGGWKPK+DLPSLV +YL K
Sbjct: 301 AHYGLLLMGRTLKGSLFGGWKPKSDLPSLVEKYLNK 336

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454573|ref|XP_002263525.1| PREDICTED: alcohol dehydrogenase-like 6 isoform 1 [Vitis vinifera] gi|297737206|emb|CBI26407.3| unnamed protein product [Vitis vinifera]

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 276/339 (81%), Positives = 311/339 (91%)

Query: 2   STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA 61
           S+SIK P VITC+AAV +GAG+ LV+EEVEV+PPQP EIRIKVV TSLCRSDITAW    
Sbjct: 3   SSSIKTPNVITCRAAVGYGAGEALVIEEVEVSPPQPMEIRIKVVSTSLCRSDITAWSQAP 62

Query: 62  IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
           IFPRIFGHEASGIVESVG GVTEF EG+HVLT+F GEC TCR C S KSN C+VLGLER+
Sbjct: 63  IFPRIFGHEASGIVESVGEGVTEFEEGDHVLTLFTGECMTCRHCTSGKSNMCQVLGLERK 122

Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG 181
           GVMHSDQ+TRFSIKGKP+YHYCAVSSFSEYTVVHSGCA+KVSS+APL+KICLLSCG+SAG
Sbjct: 123 GVMHSDQKTRFSIKGKPIYHYCAVSSFSEYTVVHSGCALKVSSLAPLDKICLLSCGVSAG 182

Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
           LGAAW VA+I++GSTVVIFGLGTVGLSVAQGAK RGASRIIGVD N EK EKAKAFG+TE
Sbjct: 183 LGAAWKVANITEGSTVVIFGLGTVGLSVAQGAKQRGASRIIGVDINSEKMEKAKAFGITE 242

Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
           F+NP+D NEPVQQVIK++TDGGADYSFECIGDTGM+TTALQSCCDGWGL VTLGVPK+ P
Sbjct: 243 FVNPHDCNEPVQQVIKQMTDGGADYSFECIGDTGMVTTALQSCCDGWGLTVTLGVPKVNP 302

Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           E+++HYGLFLSGRTL+GSLFGGW+PK+DL SLV+ Y++K
Sbjct: 303 EISSHYGLFLSGRTLRGSLFGGWRPKSDLHSLVDMYMRK 341

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515985|ref|XP_004165028.1| PREDICTED: alcohol dehydrogenase-like 6-like [Cucumis sativus]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 274/333 (82%), Positives = 304/333 (91%)

Query: 8   PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF 67
           P V+TCKAAVAWG GQPLV+EEVEV+PPQP EIR+KVV TSLCRSD++AWETQAIFPRIF
Sbjct: 9   PAVLTCKAAVAWGPGQPLVIEEVEVSPPQPMEIRVKVVSTSLCRSDLSAWETQAIFPRIF 68

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           GHEASG+VESVGPGVTEF+EG+HVLT+F GECKTCR C S KSN C+VLGLERRGVMHSD
Sbjct: 69  GHEASGVVESVGPGVTEFSEGDHVLTLFTGECKTCRHCTSGKSNMCQVLGLERRGVMHSD 128

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
           Q+TRFSIKGKP+YHYCAVSSFSEYTVVHSGCAVKVS   PLEKICLLSCG++AGLGAAWN
Sbjct: 129 QKTRFSIKGKPIYHYCAVSSFSEYTVVHSGCAVKVSLAVPLEKICLLSCGVAAGLGAAWN 188

Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
           VADIS+GSTVVI+GLGTVGLSVAQGAK RGAS+IIGVD NPEK E AK FG+T F+NP +
Sbjct: 189 VADISEGSTVVIYGLGTVGLSVAQGAKVRGASQIIGVDINPEKSEIAKTFGITHFVNPKE 248

Query: 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
            +E +QQVI RITDGGADY+FECIGDTGMITTALQSCC GWGL VTLGVPK+ PE+ AHY
Sbjct: 249 CSESIQQVINRITDGGADYAFECIGDTGMITTALQSCCQGWGLTVTLGVPKVNPELTAHY 308

Query: 308 GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           G+ LSGRTL+GSLFGGWKPK+DLPSLV+ Y KK
Sbjct: 309 GILLSGRTLRGSLFGGWKPKSDLPSLVDMYTKK 341

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469452|ref|XP_004152434.1| PREDICTED: alcohol dehydrogenase-like 6-like [Cucumis sativus]

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 273/333 (81%), Positives = 304/333 (91%)

Query: 8   PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF 67
           P V+TCKAAVAWG GQPLV+EEVEV+PPQP EIR+KVV TSLCRSD++AWETQAIFPRIF
Sbjct: 9   PAVLTCKAAVAWGPGQPLVIEEVEVSPPQPMEIRVKVVSTSLCRSDLSAWETQAIFPRIF 68

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           GHEASG+VESVGPGVTEF+EG+HVLT+F GECKTCR C S KSN C+VLGLER+GVMHSD
Sbjct: 69  GHEASGVVESVGPGVTEFSEGDHVLTLFTGECKTCRHCTSGKSNMCQVLGLERKGVMHSD 128

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
           Q+TRFSIKGKP+YHYCAVSSFSEYTVVHSGCAVKVS   PLEKICLLSCG++AGLGAAWN
Sbjct: 129 QKTRFSIKGKPIYHYCAVSSFSEYTVVHSGCAVKVSLAVPLEKICLLSCGVAAGLGAAWN 188

Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
           VADIS+GSTVVI+GLGTVGLSVAQGAK RGAS+IIGVD NPEK E AK FG+T F+NP +
Sbjct: 189 VADISEGSTVVIYGLGTVGLSVAQGAKVRGASKIIGVDINPEKSEIAKTFGITHFVNPKE 248

Query: 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
            +E +QQVI RITDGGADY+FECIGDTGMITTALQSCC GWGL VTLGVPK+ PE+ AHY
Sbjct: 249 CSESIQQVINRITDGGADYAFECIGDTGMITTALQSCCQGWGLTVTLGVPKVNPELTAHY 308

Query: 308 GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           G+ LSGRTL+GSLFGGWKPK+DLPSLV+ Y KK
Sbjct: 309 GILLSGRTLRGSLFGGWKPKSDLPSLVDMYTKK 341

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359489892|ref|XP_003633990.1| PREDICTED: alcohol dehydrogenase-like 6 isoform 2 [Vitis vinifera]

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 276/343 (80%), Positives = 312/343 (90%), Gaps = 4/343 (1%)

Query: 2   STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--- 58
           S+SIK P VITC+AAV +GAG+ LV+EEVEV+PPQP EIRIKVV TSLCRSDITAW    
Sbjct: 3   SSSIKTPNVITCRAAVGYGAGEALVIEEVEVSPPQPMEIRIKVVSTSLCRSDITAWSQVN 62

Query: 59  -TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG 117
            +  IFPRIFGHEASGIVESVG GVTEF EG+HVLT+F GEC TCR C S KSN C+VLG
Sbjct: 63  SSPHIFPRIFGHEASGIVESVGEGVTEFEEGDHVLTLFTGECMTCRHCTSGKSNMCQVLG 122

Query: 118 LERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCG 177
           LER+GVMHSDQ+TRFSIKGKP+YHYCAVSSFSEYTVVHSGCA+KVSS+APL+KICLLSCG
Sbjct: 123 LERKGVMHSDQKTRFSIKGKPIYHYCAVSSFSEYTVVHSGCALKVSSLAPLDKICLLSCG 182

Query: 178 LSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
           +SAGLGAAW VA+I++GSTVVIFGLGTVGLSVAQGAK RGASRIIGVD N EK EKAKAF
Sbjct: 183 VSAGLGAAWKVANITEGSTVVIFGLGTVGLSVAQGAKQRGASRIIGVDINSEKMEKAKAF 242

Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
           G+TEF+NP+D NEPVQQVIK++TDGGADYSFECIGDTGM+TTALQSCCDGWGL VTLGVP
Sbjct: 243 GITEFVNPHDCNEPVQQVIKQMTDGGADYSFECIGDTGMVTTALQSCCDGWGLTVTLGVP 302

Query: 298 KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           K+ PE+++HYGLFLSGRTL+GSLFGGW+PK+DL SLV+ Y++K
Sbjct: 303 KVNPEISSHYGLFLSGRTLRGSLFGGWRPKSDLHSLVDMYMRK 345

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357498987|ref|XP_003619782.1| Alcohol dehydrogenase [Medicago truncatula] gi|355494797|gb|AES76000.1| Alcohol dehydrogenase [Medicago truncatula]

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/333 (81%), Positives = 304/333 (91%)

Query: 8   PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF 67
           PQVITCKAAVAWGAG+ LV+EEVEV+PPQP EIRIKVV TSLCRSD++AWET AIFPRIF
Sbjct: 7   PQVITCKAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWETHAIFPRIF 66

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           GHEASGIVESVG GVTEF EG+ VLTVFIGEC +C+ CKS K+N C+VLGLER+G+MHSD
Sbjct: 67  GHEASGIVESVGLGVTEFKEGDQVLTVFIGECMSCKLCKSGKTNICQVLGLERKGLMHSD 126

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
           Q+TRF++KGKPVYHYC VSSFSEYTVVHSGCAVKVS   PLEKIC+LSCG+SAGLGAAWN
Sbjct: 127 QKTRFTVKGKPVYHYCGVSSFSEYTVVHSGCAVKVSPHVPLEKICILSCGVSAGLGAAWN 186

Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
           VAD+SKGSTVVIFGLGTVGLSVAQGAK RGASRIIGVD NP+KCE AK+FG+TE ++P+ 
Sbjct: 187 VADVSKGSTVVIFGLGTVGLSVAQGAKLRGASRIIGVDNNPQKCENAKSFGITEVVDPSL 246

Query: 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
             EP+ QVIKRITDGGAD+ FEC GDT MITTALQSCCDGWGL VTLGVPK+KPE++AHY
Sbjct: 247 YKEPIAQVIKRITDGGADFCFECAGDTDMITTALQSCCDGWGLTVTLGVPKVKPEMSAHY 306

Query: 308 GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           GLFL+GRTLKGSLFGGWKPKTDLPSLV +Y+ K
Sbjct: 307 GLFLTGRTLKGSLFGGWKPKTDLPSLVEKYVNK 339

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18420834|ref|NP_568453.1| alcohol dehydrogenase-like 6 [Arabidopsis thaliana] gi|158563847|sp|Q8LEB2.2|ADHL6_ARATH RecName: Full=Alcohol dehydrogenase-like 6 gi|19310538|gb|AAL85002.1| AT5g24760/T4C12_30 [Arabidopsis thaliana] gi|20334800|gb|AAM16261.1| AT5g24760/T4C12_30 [Arabidopsis thaliana] gi|332005972|gb|AED93355.1| alcohol dehydrogenase-like 6 [Arabidopsis thaliana]

 Score =  566 bits (1458), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 260/339 (76%), Positives = 307/339 (90%)

Query: 2   STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA 61
           S+S +QPQVITC AAVAW AG+PLV+EEVEV+PPQP EIRIKVVCTSLCRSD++AWE+Q+
Sbjct: 5   SSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS 64

Query: 62  IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
           + PRIFGHEA+GIVES+G GVTEF +G+HVL VF GEC +CR C S KSN C+VLG+ER+
Sbjct: 65  LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERK 124

Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG 181
           G+MHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  +APL KICLLSCG++AG
Sbjct: 125 GLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAG 184

Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
           LGAAWNVAD+ KGS+VVIFGLGTVGLSVAQGAK RGA++I+GVD NP K E+AK FGVT+
Sbjct: 185 LGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTD 244

Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
           F+N ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK KP
Sbjct: 245 FINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKP 304

Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           EV+AHYGLFLSG++LKG+LFGGWKPK+DLPSL+++Y+ K
Sbjct: 305 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNK 343

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297812675|ref|XP_002874221.1| hypothetical protein ARALYDRAFT_489336 [Arabidopsis lyrata subsp. lyrata] gi|297320058|gb|EFH50480.1| hypothetical protein ARALYDRAFT_489336 [Arabidopsis lyrata subsp. lyrata]

 Score =  562 bits (1449), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 259/336 (77%), Positives = 304/336 (90%)

Query: 5   IKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFP 64
            +QPQVITCKAAVAW AG+PLV+EEVEV+PPQP EIRIKVVCTSLCRSD++AWE Q++ P
Sbjct: 9   FEQPQVITCKAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWEAQSLLP 68

Query: 65  RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
           RIFGHEA+GIVES+G GVTEF +G+HVL VF GEC +CR C S KSN C+VLG+ER+G+M
Sbjct: 69  RIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERKGLM 128

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
           HSDQ+TRF+IKGKPVYHYCAVSSFSEYTVVHSGCAVKV  +APL KICLLSCG++AGLGA
Sbjct: 129 HSDQKTRFTIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPVAPLHKICLLSCGVAAGLGA 188

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
           AWNVAD+ KGS+VVIFGLGTVGLSVAQGAK RGA++IIGVD NP K E+AK FGVT+F+N
Sbjct: 189 AWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQIIGVDINPAKAEQAKTFGVTDFIN 248

Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
            ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK+KPEV+
Sbjct: 249 SNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKVKPEVS 308

Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           AHYGLFLSG++LKG+LFGGWKPK+DLPSL+ +Y+ K
Sbjct: 309 AHYGLFLSGKSLKGTLFGGWKPKSDLPSLIEKYMNK 344

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	353
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.960	0.889	0.693	8.1e-131
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.937	0.873	0.492	3.8e-85
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.937	0.880	0.422	5.1e-74
TAIR|locus:2035619	394	AT1G32780 [Arabidopsis thalian	0.949	0.850	0.418	4.1e-72
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.943	0.890	0.418	2.3e-71
UNIPROTKB|F1NKS5	374	ADH5 "Uncharacterized protein"	0.940	0.887	0.420	2.9e-71
UNIPROTKB|F1NI89	370	ADH5 "Uncharacterized protein"	0.940	0.897	0.420	3.7e-71
UNIPROTKB|F1NKS6	362	ADH5 "Uncharacterized protein"	0.940	0.917	0.420	3.7e-71
UNIPROTKB|P11766	374	ADH5 "Alcohol dehydrogenase cl	0.943	0.890	0.415	7.7e-71
UNIPROTKB|Q3ZC42	374	ADH5 "Alcohol dehydrogenase cl	0.943	0.890	0.412	1.3e-70

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 1283 (456.7 bits), Expect = 8.1e-131, P = 8.1e-131
 Identities = 235/339 (69%), Positives = 278/339 (82%)

Query:     2 STSIKQPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQA 61
             S+S +QPQVITC AAVAW AG+                IRIKVVCTSLCRSD++AWE+Q+
Sbjct:     5 SSSFEQPQVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS 64

Query:    62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
             + PRIFGHEA+GIVES+G GVTEF +G+HVL VF GEC +CR C S KSN C+VLG+ER+
Sbjct:    65 LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMERK 124

Query:   122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXX 181
             G+MHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  +APL KI          
Sbjct:   125 GLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAG 184

Query:   182 XXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
                 WNVAD+ KGS+VVIFGLGTVGLSVAQGAK RGA++I+GVD NP K E+AK FGVT+
Sbjct:   185 LGAAWNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTD 244

Query:   242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
             F+N ND +EP+ QVIKR+T GGAD+SFEC+GDTG+ TTALQSC DGWG+ VTLGVPK KP
Sbjct:   245 FINSNDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKP 304

Query:   302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
             EV+AHYGLFLSG++LKG+LFGGWKPK+DLPSL+++Y+ K
Sbjct:   305 EVSAHYGLFLSGKSLKGTLFGGWKPKSDLPSLIDKYMNK 343

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
 Identities = 166/337 (49%), Positives = 218/337 (64%)

Query:     9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQA---IFPR 65
             Q+I CKAAVAW AG+                +RIK++ TSLC +D+  WE +    +FPR
Sbjct:     6 QIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTPLFPR 65

Query:    66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL--ERRGV 123
             IFGHEA GIVESVG GVT+   G+HVL +F GEC  CR C S++SN C++L +  ER G+
Sbjct:    66 IFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGM 125

Query:   124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXX 183
             +H D ++RFSI GKP+YH+   S+FSEYTVVHSG   K++  APL+K+            
Sbjct:   126 IH-DGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLSTGLG 184

Query:   184 XXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
                NVA   KG +V IFGLG VGL  A+GA+  GASRIIGVD N ++ ++AK FGVTE +
Sbjct:   185 ATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVTECV 244

Query:   244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
             NP D+++P+QQVI  +TDGG D S EC G    +  A +   DGWG+AV +GVP      
Sbjct:   245 NPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKDDAF 304

Query:   304 AAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
               H   FL+ RTLKG+ FG +KPKTD+P +V +Y+ K
Sbjct:   305 KTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNK 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
 Identities = 142/336 (42%), Positives = 208/336 (61%)

Query:     9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
             +VI CKAAVAW AG+                +R+K+  T +C +D   ++  + + +FP 
Sbjct:     6 KVIKCKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDAYTLSGSDPEGLFPV 65

Query:    66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
             I GHE +G VESVG GVT+F  G+ V+ +++ +C  C+ CK+ K+N C+ + + + +G+M
Sbjct:    66 ILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQGLM 125

Query:   125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
               D  +RF+ KGK ++H+   S+FSEYTVV      KV   APL+K+             
Sbjct:   126 -PDNTSRFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGISTGYGA 184

Query:   185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
               N A +  GST  +FGLG VGL+V  G K+ GA+RIIG+D NP+K E AK FG TEF+N
Sbjct:   185 AINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGATEFVN 244

Query:   245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
             P D+++P+Q+V+  +TDGG DYSFECIG+ G++  AL++C  GWG +V +GV     E++
Sbjct:   245 PKDHSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGAGQEIS 304

Query:   305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                   ++GRT KG+ FGGWK    +P LVN Y+ K
Sbjct:   305 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVNDYMNK 340

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2035619 AT1G32780 [Arabidopsis thaliana (taxid:3702)]

 Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
 Identities = 146/349 (41%), Positives = 207/349 (59%)

Query:     7 QPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAW----ETQAI 62
             Q +VITCKAAV WG                   +R+K++ +S+C +D+  W    E +  
Sbjct:     5 QGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERA 64

Query:    63 FPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RR 121
             FPRI GHEA GIVESVG GV +  EG++V+  F GEC  C+ CK ++SN CE   ++  +
Sbjct:    65 FPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMK 124

Query:   122 GVMHSDQQTRFSI---------KGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIX 172
              VM +D  TRFS          + +P+YH+   S+F+EYTV+ S C VK+   +PL+++ 
Sbjct:   125 RVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMS 184

Query:   173 XXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
                          WN+A++ +G +  +FGLG+VGL+VA+GA+ARGASRIIGVD N  K E
Sbjct:   185 LLSCGVSTGVGAAWNIANVKEGKSTAVFGLGSVGLAVAEGARARGASRIIGVDANASKFE 244

Query:   233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAV 292
             K K  GVT+F+NP D  +PV Q+I+ IT GG DYSFEC G+  ++  A  S   GWG  V
Sbjct:   245 KGKLMGVTDFINPKDLTKPVHQMIREITGGGVDYSFECTGNVDVLREAFLSTHVGWGSTV 304

Query:   293 TLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKV 341
              +G+      +  H      GR + GS+FGG+KPK+ LP+   + +K V
Sbjct:   305 LVGIYPTPRTLPLHPMELFDGRRITGSVFGGFKPKSQLPNFAQQCMKGV 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
 Identities = 142/339 (41%), Positives = 207/339 (61%)

Query:     9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
             QVI CKAAVAW AG+                +RIK++ T++C +D   ++  + +  FP 
Sbjct:     4 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 63

Query:    66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
             I GHE +GIVESVG GVT+   G+ V+ ++I +C  C+ C + K+N C+ + + + +G+M
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123

Query:   125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
               D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+             
Sbjct:   124 -PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGA 182

Query:   185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
               N A +  GST  +FGLG VGL+V  G K  GASRIIGVD N +K  +AK FG +E +N
Sbjct:   183 AVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASECIN 242

Query:   245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
             P D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A
Sbjct:   243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 302

Query:   305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL-KKVR 342
                   ++GRT KG+ FGGWK    +P LV+ Y+ KK++
Sbjct:   303 TRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIK 341

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1NKS5 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 721 (258.9 bits), Expect = 2.9e-71, P = 2.9e-71
 Identities = 142/338 (42%), Positives = 202/338 (59%)

Query:    10 VITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPRI 66
             VI CKAAVAW AG+                +RIK+V T+LC +D   ++  + +  FP I
Sbjct:     5 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 64

Query:    67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
              GHE +GIVESVG GVT+   G+ V+ ++I +C  C+ CK+ K+N C+ + + + +G+M 
Sbjct:    65 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRVTQGKGLM- 123

Query:   126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
              D   RF+ KGK +YH+   S+FSEYTVV      K+   AP +K+              
Sbjct:   124 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 183

Query:   186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
              N A +  GST  +FGLG VGL+   G KA GASRIIG+D N     KAK FG  E ++P
Sbjct:   184 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 243

Query:   246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
              D  +P+Q+V+  +TDGG DYSFECIG+ G++  AL++C  GWG++V +GV     E++ 
Sbjct:   244 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIST 303

Query:   306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL-KKVR 342
                  ++GRT KG+ FGGWK    +P LVN Y+ KK++
Sbjct:   304 RPFQLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIK 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|F1NI89 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
 Identities = 142/338 (42%), Positives = 201/338 (59%)

Query:    10 VITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPRI 66
             VI CKAAVAW AG+                +RIK+V T+LC +D   ++  + +  FP I
Sbjct:     1 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 60

Query:    67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
              GHE +GIVESVG GVT+   G+ V+ ++I +C  C+ CK+ K+N C+ +   + +G+M 
Sbjct:    61 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQGKGLM- 119

Query:   126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
              D   RF+ KGK +YH+   S+FSEYTVV      K+   AP +K+              
Sbjct:   120 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 179

Query:   186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
              N A +  GST  +FGLG VGL+   G KA GASRIIG+D N     KAK FG  E ++P
Sbjct:   180 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 239

Query:   246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
              D  +P+Q+V+  +TDGG DYSFECIG+ G++  AL++C  GWG++V +GV     E++ 
Sbjct:   240 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIST 299

Query:   306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL-KKVR 342
                  ++GRT KG+ FGGWK    +P LVN Y+ KK++
Sbjct:   300 RPFQLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIK 337

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|F1NKS6 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 720 (258.5 bits), Expect = 3.7e-71, P = 3.7e-71
 Identities = 142/338 (42%), Positives = 201/338 (59%)

Query:    10 VITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPRI 66
             VI CKAAVAW AG+                +RIK+V T+LC +D   ++  + +  FP I
Sbjct:     1 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 60

Query:    67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
              GHE +GIVESVG GVT+   G+ V+ ++I +C  C+ CK+ K+N C+ +   + +G+M 
Sbjct:    61 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQGKGLM- 119

Query:   126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
              D   RF+ KGK +YH+   S+FSEYTVV      K+   AP +K+              
Sbjct:   120 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 179

Query:   186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
              N A +  GST  +FGLG VGL+   G KA GASRIIG+D N     KAK FG  E ++P
Sbjct:   180 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 239

Query:   246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
              D  +P+Q+V+  +TDGG DYSFECIG+ G++  AL++C  GWG++V +GV     E++ 
Sbjct:   240 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHKGWGVSVIVGVAAAGQEIST 299

Query:   306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL-KKVR 342
                  ++GRT KG+ FGGWK    +P LVN Y+ KK++
Sbjct:   300 RPFQLVTGRTWKGTAFGGWKSVDSVPKLVNDYMAKKIK 337

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)]

 Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
 Identities = 141/339 (41%), Positives = 206/339 (60%)

Query:     9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
             +VI CKAAVAW AG+                +RIK++ T++C +D   ++  + +  FP 
Sbjct:     4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63

Query:    66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
             I GHE +GIVESVG GVT+   G+ V+ ++I +C  C+ C + K+N C+ + + + +G+M
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123

Query:   125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
               D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+             
Sbjct:   124 -PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182

Query:   185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
               N A +  GS   +FGLG VGL+V  G K  GASRIIGVD N +K  +AK FG TE +N
Sbjct:   183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242

Query:   245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
             P D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A
Sbjct:   243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIA 302

Query:   305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL-KKVR 342
                   ++GRT KG+ FGGWK    +P LV+ Y+ KK++
Sbjct:   303 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0051775 "response to redox state" evidence=IDA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IDA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=TAS

UNIPROTKB|Q3ZC42 ADH5 "Alcohol dehydrogenase class-3" [Bos taurus (taxid:9913)]

 Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
 Identities = 140/339 (41%), Positives = 207/339 (61%)

Query:     9 QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
             QVI CKAAVAW AG+                +RIK++ T++C +D   ++  + +  +P 
Sbjct:     4 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPV 63

Query:    66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVM 124
             I GHE +GIVESVG GVT+   G+ V+ ++I +C  C+ C + K+N C+ + + + +G+M
Sbjct:    64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123

Query:   125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXX 184
               D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+             
Sbjct:   124 -PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182

Query:   185 XWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
               N A +  GST  +FGLG VGL+V  G K  GA+RIIGVD N +K  +AK FG +E +N
Sbjct:   183 ALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASECIN 242

Query:   245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
             P D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A
Sbjct:   243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEEIA 302

Query:   305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL-KKVR 342
                   ++GRT KG+ FGGWK    +P LV+ Y+ KK++
Sbjct:   303 TRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.4716	0.9405	0.8877	yes	no
P14674	ADH2_SOLTU	1, ., 1, ., 1, ., 1	0.5714	0.9405	0.8736	N/A	no
P14675	ADH3_SOLTU	1, ., 1, ., 1, ., 1	0.5668	0.9575	0.8894	N/A	no
A2XAZ3	ADHX_ORYSI	1, ., 1, ., 1, ., 2, 8, 4	0.5190	0.9546	0.8845	N/A	no
P14673	ADH1_SOLTU	1, ., 1, ., 1, ., 1	0.5639	0.9575	0.8894	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.4566	0.9716	0.9171	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.4686	0.9405	0.8877	yes	no
P28032	ADH2_SOLLC	1, ., 1, ., 1, ., 1	0.5552	0.9575	0.8894	N/A	no
P93629	ADHX_MAIZE	1, ., 1, ., 1, ., 2, 8, 4	0.5059	0.9461	0.8766	N/A	no
P48977	ADH_MALDO	1, ., 1, ., 1, ., 1	0.5684	0.9405	0.8736	N/A	no
P00333	ADH1_MAIZE	1, ., 1, ., 1, ., 1	0.5555	0.9575	0.8918	N/A	no
P80572	ADHX_PEA	1, ., 1, ., 1, ., 2, 8, 4	0.5147	0.9461	0.8835	N/A	no
Q4R1E8	ADH2_ORYSI	1, ., 1, ., 1, ., 1	0.5386	0.9405	0.8759	N/A	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4502	0.9546	0.8891	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.4686	0.9405	0.8877	yes	no
Q03505	ADH1_RABIT	1, ., 1, ., 1, ., 1	0.4790	0.9405	0.8853	yes	no
P25141	ADH1_PETHY	1, ., 1, ., 1, ., 1	0.5816	0.9405	0.8691	N/A	no
P05336	ADH1_HORVU	1, ., 1, ., 1, ., 1	0.5584	0.9575	0.8918	N/A	no
P12886	ADH1_PEA	1, ., 1, ., 1, ., 1	0.5432	0.9376	0.8710	N/A	no
P13603	ADH1_TRIRP	1, ., 1, ., 1, ., 1	0.5552	0.9376	0.8710	N/A	no
P17648	ADH_FRAAN	1, ., 1, ., 1, ., 1	0.5476	0.9405	0.8736	N/A	no
P04707	ADH2_MAIZE	1, ., 1, ., 1, ., 1	0.5476	0.9405	0.8759	N/A	no
P14219	ADH1_PENAM	1, ., 1, ., 1, ., 1	0.5614	0.9575	0.8918	N/A	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.4653	0.9546	0.8891	yes	no
Q75ZX4	ADH1_ORYSI	1, ., 1, ., 1, ., 1	0.5555	0.9575	0.8918	N/A	no
P10847	ADH2_HORVU	1, ., 1, ., 1, ., 1	0.5327	0.9235	0.8739	N/A	no
Q8LEB2	ADHL6_ARATH	1, ., 1, ., 1, ., 1	0.7669	0.9603	0.8897	yes	no
P10848	ADH3_HORVU	1, ., 1, ., 1, ., 1	0.5409	0.9575	0.8918	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.976
4th Layer	1.1.1.1	0.991

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.IV.2461.1	alcohol dehydrogenase (EC-1.1.1.1) (377 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XI.3391.1	pyruvate decarboxylase (EC-4.1.1.1) (574 aa)						•			0.899
	gw1.V.2645.1	hypothetical protein (479 aa)						•			0.899
	gw1.III.2325.1	SubName- Full=Putative uncharacterized protein; (514 aa)						•			0.899
	gw1.4555.2.1	annotation not avaliable (88 aa)						•			0.899
	gw1.134.62.1	hypothetical protein (453 aa)						•			0.899
	grail3.0005008802	aldehyde dehydrogenase (NAD+) (EC-1.2.1.3) (543 aa)						•			0.899
	fgenesh4_pg.C_LG_II000742	hypothetical protein (480 aa)						•			0.899
	eugene3.01840014	pyruvate decarboxylase (549 aa)						•			0.899
	eugene3.00060891	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XVI0442	pyruvate decarboxylase (EC-4.1.1.1) (606 aa)						•			0.899

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	353
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	0.0
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-159
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-150
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-147
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-137
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-123
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-123
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-117
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-105
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	1e-80
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	8e-74
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	6e-73
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-63
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	6e-55
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	3e-50
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	4e-48
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	3e-46
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	7e-45
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	1e-44
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	3e-44
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	6e-43
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	5e-40
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	2e-39
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	3e-39
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	2e-38
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	6e-38
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	7e-37
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-36
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	4e-35
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	5e-33
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	1e-32
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	2e-31
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	3e-31
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	2e-29
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-29
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-28
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	1e-27
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	2e-27
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	4e-27
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	6e-27
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-26
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	3e-26
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	1e-25
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	1e-25
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-25
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	1e-24
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	2e-24
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	7e-24
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-23
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	1e-23
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-23
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	7e-23
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	5e-22
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	2e-20
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	4e-20
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	2e-19
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	7e-19
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	1e-18
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	2e-18
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-18
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	6e-18
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	8e-18
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-17
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	2e-17
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	4e-17
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	1e-16
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	5e-16
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	7e-15
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-14
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	2e-14
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	5e-14
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	9e-13
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-12
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-12
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	6e-12
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	1e-11
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	3e-11
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	6e-11
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	7e-11
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	4e-10
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	6e-10
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	8e-10
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	2e-09
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	4e-09
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	5e-09
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	5e-08
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-07
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	7e-07
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	9e-07
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	1e-06
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-06
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	3e-06
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	3e-06
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	3e-06
PRK14806	735	PRK14806, PRK14806, bifunctional cyclohexadienyl d	4e-06
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	1e-05
pfam02254	116	pfam02254, TrkA_N, TrkA-N domain	2e-05
COG1748	389	COG1748, LYS9, Saccharopine dehydrogenase and rela	4e-05
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	4e-05
COG2130	340	COG2130, COG2130, Putative NADP-dependent oxidored	4e-05
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	6e-05
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	7e-05
cd05288	329	cd05288, PGDH, Prostaglandin dehydrogenases	8e-05
COG0287	279	COG0287, TyrA, Prephenate dehydrogenase [Amino aci	3e-04
PRK01390	460	PRK01390, murD, UDP-N-acetylmuramoyl-L-alanyl-D-gl	5e-04
cd05300	313	cd05300, 2-Hacid_dh_1, Putative D-isomer specific	5e-04
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	6e-04
COG0569	225	COG0569, TrkA, K+ transport systems, NAD-binding c	0.001
pfam02826	175	pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro	0.002
smart00829	287	smart00829, PKS_ER, Enoylreductase	0.002
PRK08507	275	PRK08507, PRK08507, prephenate dehydrogenase; Vali	0.002
PRK06545	359	PRK06545, PRK06545, prephenate dehydrogenase; Vali	0.003
cd01075	200	cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d	0.003
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	0.004
TIGR03026	409	TIGR03026, NDP-sugDHase, nucleotide sugar dehydrog	0.004

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  663 bits (1713), Expect = 0.0
 Identities = 278/341 (81%), Positives = 312/341 (91%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ 60
            S+SI QP VITC+AAVAWGAG+ LV+EEVEV+PPQP EIRIKVV TSLCRSD++AWE+Q
Sbjct: 1   SSSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ 60

Query: 61  AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER 120
           A+FPRIFGHEASGIVES+G GVTEF +G+HVLTVF GEC +CR C S KSN C+VLGLER
Sbjct: 61  ALFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLER 120

Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180
           +GVMHSDQ+TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  +APL KICLLSCG++A
Sbjct: 121 KGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAA 180

Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
           GLGAAWNVAD+SKGS+VVIFGLGTVGLSVAQGAK RGAS+IIGVD NPEK EKAK FGVT
Sbjct: 181 GLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVT 240

Query: 241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300
           +F+NPND +EP+QQVIKR+T GGADYSFEC+GDTG+ TTALQSC DGWGL VTLGVPK K
Sbjct: 241 DFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK 300

Query: 301 PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKV 341
           PEV+AHYGLFLSGRTLKGSLFGGWKPK+DLPSLV++Y+ K 
Sbjct: 301 PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKE 341

Length = 378

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  573 bits (1478), Expect = 0.0
 Identities = 208/334 (62%), Positives = 257/334 (76%), Gaps = 4/334 (1%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIF 67
           ITCKAAVAW AG+PLV+EEVEV PPQ  E+RIK++ TSLC +D+  WE      +FPRI 
Sbjct: 1   ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHS 126
           GHEA+GIVESVG GVT+   G+HVL VF GECK CR CKS+KSN C++L +   RGVM +
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMIN 120

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
           D ++RFSI GKP+YH+   S+FSEYTVVH GC  K++  APL+K+CLLSCG+S GLGAAW
Sbjct: 121 DGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAW 180

Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
           NVA + KGSTV IFGLG VGL+VA+GA+ RGASRIIGVD NP K E+AK FGVTEF+NP 
Sbjct: 181 NVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240

Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
           D+++PVQ+VI  +T GG DYSFEC G+   + +A +   DGWG+ V LGVP      + H
Sbjct: 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTH 300

Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
               L+GRTLKG+LFGG+KPKTDLP+LV +Y+KK
Sbjct: 301 PMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKK 334

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  449 bits (1158), Expect = e-159
 Identities = 171/332 (51%), Positives = 226/332 (68%), Gaps = 4/332 (1%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRIFG 68
           I CKAAVAW AG+PLV+EE+EV PP+  E+RIK++ TS+C +DI A E     +FP I G
Sbjct: 1   IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLFPVILG 60

Query: 69  HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
           HE +GIVESVG GVT    G+ V+ +FIG+C  C  C+S K+N C+       G+M  D 
Sbjct: 61  HEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM-PDG 119

Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
            +RF+ KGK +YH+   S+FS+YTVV      K+   APLE +CLL CG S G GAAWN 
Sbjct: 120 TSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNT 179

Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
           A +  GSTV +FGLG VGLS   GAK  GASRIIGVD N +K EKAK FG T+F+NP D+
Sbjct: 180 AKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS 239

Query: 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG 308
           ++PV +VI+ +T GG DYSFEC G+  ++  AL+S   GWG++V +GVP    E++    
Sbjct: 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGA-ELSIRPF 298

Query: 309 LFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
             + GRT KGS FGG+K ++D+P LV++Y+ K
Sbjct: 299 QLILGRTWKGSFFGGFKSRSDVPKLVSKYMNK 330

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  428 bits (1103), Expect = e-150
 Identities = 183/347 (52%), Positives = 248/347 (71%), Gaps = 13/347 (3%)

Query: 7   QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW----ETQAI 62
           Q +VITCKAAVAWG G+PLV+EE+ V+PPQ  E+RIK++ TS+C +D++AW    E Q  
Sbjct: 5   QGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRA 64

Query: 63  FPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-R 121
           +PRI GHEA+GIVESVG GV +   G+HV+ +F GEC  CR CK DK+N CE   ++  +
Sbjct: 65  YPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFK 124

Query: 122 GVMHSDQQTRFSIK--GKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179
            VM +D +TRFS K  G+P+YH+   S+F+EYTV+ S C VK+   APL+K+ LLSCG+S
Sbjct: 125 SVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVS 184

Query: 180 AGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
            G+GAAWN A++  GS+V IFGLG VGL+VA+GA+ARGAS+IIGVD NPEK EK K  G+
Sbjct: 185 TGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244

Query: 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV--- 296
           T+F+NP D+++PV + I+ +T GG DYSFEC G+  ++  A  S  DGWGL V LG+   
Sbjct: 245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT 304

Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN 343
           PK+ P    H      GR++ GS+FG +K K+ LP+L  + ++ V N
Sbjct: 305 PKMLP---LHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVN 348

Length = 381

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  419 bits (1080), Expect = e-147
 Identities = 166/334 (49%), Positives = 229/334 (68%), Gaps = 5/334 (1%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW---ETQAIFPRIF 67
           ITCKAAVAW AG+PL +EEVEV PP+  E+RIK++ T +C +D       + + +FP I 
Sbjct: 1   ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGVMHS 126
           GHE +GIVESVG GVT    G+HV+ ++  EC  C+ CKS K+N C ++   + +G+M  
Sbjct: 61  GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-P 119

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
           D  +RFS KGKP+YH+   S+FSEYTVV      K++  APL+K+CLL CG++ G GA  
Sbjct: 120 DGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVL 179

Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
           N A +  GSTV +FGLG VGL+V QGAKA GASRIIG+D NP+K E AK FG T+ +NP 
Sbjct: 180 NTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239

Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
           D+++P+QQV+  +TDGG DY+FECIG+  ++  AL++C  GWG +V +GV     E++  
Sbjct: 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTR 299

Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
               ++GR  KG+ FGGWK ++ +P LV  Y+K 
Sbjct: 300 PFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKG 333

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  394 bits (1015), Expect = e-137
 Identities = 162/335 (48%), Positives = 217/335 (64%), Gaps = 4/335 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--AIFPRI 66
           +VI CKAAV W   +P  +EE+EV PP+  E+RIK+V T +CRSD      +    FP I
Sbjct: 4   KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTPFPVI 63

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
            GHEA+GIVESVG GVT    G+ V+ +F+ +C  CR C + +SN C    L + +G+M 
Sbjct: 64  LGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM- 122

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
            D  +RF+ KGKP++H+   S+FSEYTVV      K+ + APLEK+CL+ CG S G GAA
Sbjct: 123 QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAA 182

Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            N A ++ GST  +FGLG VGLS   G KA GASRII VD N +K  KAK  G TE +NP
Sbjct: 183 VNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242

Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +TDGG D+SFE IG    +  AL SC +G+G++V +GVP     ++ 
Sbjct: 243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSI 302

Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L L+GRT KG++FGGWK K  +P LV  Y+ K
Sbjct: 303 NPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAK 337

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  359 bits (924), Expect = e-123
 Identities = 150/333 (45%), Positives = 206/333 (61%), Gaps = 8/333 (2%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIF 67
           +  +AAVA  AG+PL +EEV+++PP+  E+ +++  T +C +D            FP + 
Sbjct: 1   MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLS-GDDPEGFPAVL 59

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG-LERRGVMHS 126
           GHE +GIVE+VG GVT    G+HV+ +F  EC  C+ C S K N CE +   + +G M  
Sbjct: 60  GHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-P 118

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
           D  TR S  G PVYHY   S+F+EYTVVH    VK+   APLEK CLL CG++ G+GA  
Sbjct: 119 DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVV 178

Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
           N A +  G TV +FGLG VGL+  QGAKA GA RII VD NPEK E AK FG T F+NP 
Sbjct: 179 NTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238

Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
           +  + V + I  +TDGGADY+FEC+G+  ++  AL+      G +V +GV     E++  
Sbjct: 239 E-VDDVVEAIVELTDGGADYAFECVGNVEVMRQALE-ATHRGGTSVIIGVAGAGQEISTR 296

Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLK 339
               ++GR  KGS FGG +P++D+P LV+ Y+ 
Sbjct: 297 PFQLVTGRVWKGSAFGGARPRSDIPRLVDLYMA 329

Length = 366

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  359 bits (922), Expect = e-123
 Identities = 158/331 (47%), Positives = 210/331 (63%), Gaps = 4/331 (1%)

Query: 13  CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--AIFPRIFGHE 70
           CKAAV W  G+PL +EE+EV PP+  E+RIKVV T +C +D+   + +     P I GHE
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVILGHE 60

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL-GLERRGVMHSDQQ 129
            +GIVES+GPGVT    G+ V+ +F  +C  C+QC + + N C    G   RG+M SD  
Sbjct: 61  GAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGT 119

Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
           +RF+ KGKP++H+   S+F+EYTVV      K+   APLEK+CL+ CG S G GAA N A
Sbjct: 120 SRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTA 179

Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
            ++ GST  +FGLG VGLSV  G KA GASRII VD N +K EKAK  G TE +NP D +
Sbjct: 180 KVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239

Query: 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL 309
           +P+ +V+  +TDGG DY+FE IG    +  AL +   G G +V +GVP    E       
Sbjct: 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPND 299

Query: 310 FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
            L+GRT+KG++FGGWK K  +P LV  Y +K
Sbjct: 300 LLTGRTIKGTVFGGWKSKDSVPKLVALYRQK 330

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  343 bits (881), Expect = e-117
 Identities = 154/330 (46%), Positives = 219/330 (66%), Gaps = 5/330 (1%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD---ITAWETQAIFPRIFGHE 70
           +AAVAW AGQPL +EEV+V  PQ  E+ +++V T +C +D   ++  + + +FP I GHE
Sbjct: 3   RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE-VLGLERRGVMHSDQQ 129
            +GIVE+VG GVT    G+HV+ ++  EC  C+ C S K+N C  V   + +G+M  D  
Sbjct: 63  GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGT 121

Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
           +RFS  G+P+YHY   S+FSEYTVV      K++  APLE++CLL CG++ G+GA  N A
Sbjct: 122 SRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTA 181

Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
            + +G TV +FGLG +GLSV QGA+   ASRII +D NP K E AK  G T+ +NPND +
Sbjct: 182 KVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD 241

Query: 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL 309
           +P+Q+VI  ITDGG DYSFECIG+  ++  AL+ C  GWG ++ +GV     E++     
Sbjct: 242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQ 301

Query: 310 FLSGRTLKGSLFGGWKPKTDLPSLVNRYLK 339
            ++GR  +GS FGG K +T+LP +V +Y+K
Sbjct: 302 LVTGRVWRGSAFGGVKGRTELPGIVEQYMK 331

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  311 bits (800), Expect = e-105
 Identities = 134/329 (40%), Positives = 188/329 (57%), Gaps = 8/329 (2%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRIFGHEA 71
           +AAV    G+PL +EEVE++ P P E+ +++    LC SD+        A  P + GHE 
Sbjct: 2   RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEG 61

Query: 72  SGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTR 131
           +G+VE VGPGVT    G+HV+  +I  C TCR C   + N C+ LG    G    D   R
Sbjct: 62  AGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCD-LGAGILGGQLPDGTRR 120

Query: 132 FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADI 191
           F+  G+PV   C + +F+EYTVV     VK+    PL++  LL CG++ G+GA  N A +
Sbjct: 121 FTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARV 180

Query: 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251
             G TV + G G VGL+  QGA+  GASRII VD  PEK E A+ FG T  +N ++ ++ 
Sbjct: 181 RPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE-DDA 239

Query: 252 VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-YGL 309
           V+ V + +TDG GADY+FE +G    I  AL     G G AV +G+      V+     L
Sbjct: 240 VEAV-RDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALEL 297

Query: 310 FLSGRTLKGSLFGGWKPKTDLPSLVNRYL 338
           FLS + L+GSL+G   P+ D+P L++ Y 
Sbjct: 298 FLSEKRLQGSLYGSANPRRDIPRLLDLYR 326

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  250 bits (640), Expect = 1e-80
 Identities = 112/333 (33%), Positives = 163/333 (48%), Gaps = 11/333 (3%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIF 67
           +   AAV    G P V+E+VE++ P+P+E+ +++V T +C +D+       +    P + 
Sbjct: 1   MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVV-RDGGLPTPLPAVL 59

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           GHE +G+VE+VG  VT    G+HV+  F   C  C  C S     CE            D
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPD 118

Query: 128 QQTRFSI-KGKPVY-HYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
             T  S+  G PV+ H+   SSF+ Y VVH    VKV    PLE +  L CG+  G GA 
Sbjct: 119 GSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAV 178

Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            NV     GS++ +FG G VGL+    AK  G + II VD    + E AK  G T  +NP
Sbjct: 179 LNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238

Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            + +  +   I+ IT GG DY+ +  G   +I  A+ +     G    +G P    EV  
Sbjct: 239 KEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTL 295

Query: 306 HYGLFL-SGRTLKGSLFGGWKPKTDLPSLVNRY 337
                L SG+T++G + G   P+  +P L+  Y
Sbjct: 296 DVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELY 328

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  232 bits (594), Expect = 8e-74
 Identities = 121/329 (36%), Positives = 171/329 (51%), Gaps = 8/329 (2%)

Query: 15  AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI--FPRIFGHEAS 72
           A   +   +PLV+EEVE++PP P E+ +K+    LC SD++          P   GHEA+
Sbjct: 11  APTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAA 70

Query: 73  GIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTR 131
           G+V  VG GVT+   G+HV+ VF+  C  CR C   +   CE        G + S  + R
Sbjct: 71  GVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGR-R 129

Query: 132 FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADI 191
             ++G  + H+  VS+F+EY VV     VK+    PLE   L  C +  G+GA  N A +
Sbjct: 130 LRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGV 189

Query: 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251
             G +V + GLG VGLS   GA A GAS+++ VD N +K   A+  G T  +N  D N  
Sbjct: 190 RPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPN-A 248

Query: 252 VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-AHYGLF 310
           V+QV + +T GG DY+FE  G    + TA +    G G  VT G+P  +  ++     L 
Sbjct: 249 VEQV-RELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLV 306

Query: 311 LSGRTLKGSLFGGWKPKTDLPSLVNRYLK 339
              RTLKGS  G   P+ D+P  +  YL 
Sbjct: 307 AEERTLKGSYMGSCVPRRDIPRYLALYLS 335

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  230 bits (588), Expect = 6e-73
 Identities = 129/333 (38%), Positives = 181/333 (54%), Gaps = 14/333 (4%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD---ITAWETQAIFPRIFGHE 70
           KAAV WG GQP  VEE+E++ P+  E+ +K+V + LC SD   +T       +P + GHE
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHE 62

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
            +G+V  VGPGVT    G+HV+  FI  C  CR C +   N C++      G   SD   
Sbjct: 63  GAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTY 122

Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD 190
           RF   G+ V   C + +FSEYTVV     VK+    PL+K CL+ CG+  G G+A N+AD
Sbjct: 123 RFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIAD 182

Query: 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
           +  G TVV+ G+G VG++  QGA   GA ++I VD    K E+A  FG T         E
Sbjct: 183 VRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF--ASMEE 240

Query: 251 PVQQVIKRITDG-GADYSFECIG--DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
            V Q+++ +T+G GAD +   +G  D   I  AL +   G G  V  G+  +  +V    
Sbjct: 241 AV-QLVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMA-DVDVKV 297

Query: 308 GLF---LSGRTLKGSLFGGWKPKTDLPSLVNRY 337
            LF   L  + L+G+LFGG  P+ D+P L+  Y
Sbjct: 298 NLFELTLLQKELQGTLFGGANPRADIPRLLELY 330

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  205 bits (524), Expect = 2e-63
 Identities = 115/330 (34%), Positives = 149/330 (45%), Gaps = 15/330 (4%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR--IFGHEA 71
           KAAV  G   PL +EE+ V  P+  EI I+V    +C SD+   + +  FP   + GHE 
Sbjct: 2   KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPFVLGHEI 61

Query: 72  SGIVESVGPGVT---EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR-GVMHSD 127
           SG V  VGP V      + G+ V+  FI  C  CR C   K N CE      R      D
Sbjct: 62  SGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYD 121

Query: 128 QQTR-FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
             TR F + G PVY Y ++   +EY VV +     +       +  +L C      GA  
Sbjct: 122 GTTRLFRLDGGPVYMY-SMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALK 180

Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
           + AD+  G TV + G+G VG S  Q AKA GAS II VD   EK  KAK  G T  +N  
Sbjct: 181 HAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAA 240

Query: 247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
             +      I+ IT G G D   E +G       AL    DG G AV +G+         
Sbjct: 241 KEDAVAA--IREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEI 297

Query: 306 HYGLFLS-GRTLKGSLFGGWKPKTDLPSLV 334
                +  G  + GS   G +P+ DLP LV
Sbjct: 298 PITRLVRRGIKIIGSY--GARPRQDLPELV 325

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  180 bits (459), Expect = 6e-55
 Identities = 80/291 (27%), Positives = 118/291 (40%), Gaps = 33/291 (11%)

Query: 39  EIRIKVVCTSLCRSDITAWE----TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTV 94
           E+ ++V    LC +D+             P I GHE +G+V  VGPGVT    G+ V+ +
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 95  FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
               C TC  C+        +LG    G                         F+EY VV
Sbjct: 61  PNLGCGTCELCRELCPG-GGILGEGLDG------------------------GFAEYVVV 95

Query: 155 HSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
            +   V +     LE+  LL   L+    A      +  G TV++ G G VGL  AQ AK
Sbjct: 96  PADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAK 155

Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274
           A GA R+I  D + EK E AK  G    ++  +  E +++ ++    GGAD   + +G  
Sbjct: 156 AAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELRLTGGGGADVVIDAVGGP 212

Query: 275 GMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325
             +  AL+      G  V +G     P +     L     T+ GS  G  +
Sbjct: 213 ETLAQALR-LLRPGGRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTRE 262

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  171 bits (434), Expect = 3e-50
 Identities = 110/335 (32%), Positives = 164/335 (48%), Gaps = 21/335 (6%)

Query: 12  TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIFG 68
           T +  +A   G P+ +E + V  P P E+ + +    +C +D+  +    I   FP + G
Sbjct: 1   TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLH-YREGGINDEFPFLLG 59

Query: 69  HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
           HEA+G+VE+VG GVT+   G++V+  +   C  CR CK  +   C           H+  
Sbjct: 60  HEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYC--------FDTHNAT 111

Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
           Q      G  +     + +F+E T+VH+G   KV   A      LL CG+ AGLGAA N 
Sbjct: 112 QKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNT 171

Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
             + +G +V + G G VG +   GA   GAS+II VD +  K E A+ FG T  +N +  
Sbjct: 172 GGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG- 230

Query: 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
            +PV+  I+ +T G GAD   + +G       A  +  D  G  V +GVP   P++    
Sbjct: 231 TDPVEA-IRALTGGFGADVVIDAVGRPETYKQAFYA-RDLAGTVVLVGVP--TPDMTLEL 286

Query: 308 GL---FLSGRTLKGSLFGGWKPKTDLPSLVNRYLK 339
            L   F  G  LK S +G   P+ D P LV+ YL+
Sbjct: 287 PLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQ 321

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  165 bits (419), Expect = 4e-48
 Identities = 88/318 (27%), Positives = 128/318 (40%), Gaps = 24/318 (7%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF----PRIFGH 69
           KAAV +  G  + +EE     P P ++ I+V  T +C SD+  +     F      I GH
Sbjct: 2   KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61

Query: 70  EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
           E  G V  VG  V  F  G+ V+      C  CR C++ + N CE  G            
Sbjct: 62  EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPG------------ 108

Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
                 G           F+EY  V +   +        E+   L+  L+         A
Sbjct: 109 ----FYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERA 164

Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
            +  G TVV+ G G +GL     AK  GAS +I VD +PE+ E AK  G  + +  N + 
Sbjct: 165 AVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVV-NPSE 223

Query: 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG 308
           +     I  +T G GAD   E +G    +  AL++   G G  V +GV   +        
Sbjct: 224 DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAGL 282

Query: 309 LFLSGRTLKGSLFGGWKP 326
           +     TL+GSL    + 
Sbjct: 283 VVSKELTLRGSLRPSGRE 300

Length = 350

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  160 bits (407), Expect = 3e-46
 Identities = 94/332 (28%), Positives = 136/332 (40%), Gaps = 62/332 (18%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--------------T 59
           KAA   G    + VEEV   P +P E++IKV    +C SD+  +               T
Sbjct: 2   KAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLT 60

Query: 60  QAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE 119
               P   GHE SG+V  VG GVT F  G+ V+     +C TC  CK    N C+ LG  
Sbjct: 61  GETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI 120

Query: 120 RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179
             G+                        F+EY VV +    K+    PLE          
Sbjct: 121 --GLGGGG------------------GGFAEYVVVPAYHVHKLPDNVPLE---------- 150

Query: 180 AGLGA-------AWN---VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 229
               A       AW+    +    G T ++ G G +GL      KA GAS+II  + +  
Sbjct: 151 --EAALVEPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEA 208

Query: 230 KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGW 288
           + E A+  G T  L+P +    V   ++++T G G D SF+C G    + TA+ +     
Sbjct: 209 RRELAEELGATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR- 265

Query: 289 GLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320
           G AV + + +       +  L L  +TL GS+
Sbjct: 266 GTAVNVAIWEKPISFNPND-LVLKEKTLTGSI 296

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  156 bits (397), Expect = 7e-45
 Identities = 91/321 (28%), Positives = 131/321 (40%), Gaps = 42/321 (13%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIF 67
           +T KAAV    GQPL +EEV V  P P E+ IKV    +C +D+   +        P I 
Sbjct: 2   MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIP 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTV-FIGECKTCRQCKSDKSNTCE---VLGLERRGV 123
           GHE  G V  VG GVT    G+ V     +  C  C  C+S   N C    + G    G 
Sbjct: 62  GHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDG- 120

Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
                                   ++EY VV +   VK+     L +   L C       
Sbjct: 121 -----------------------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYR 157

Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
           A    A++  G  V + G G +G    Q AKA GA  +I +  + EK E AK  G    +
Sbjct: 158 AL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVI 215

Query: 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
           N +D ++ ++ V +      AD   + +G   +   +L++   G G  V +G+P   P  
Sbjct: 216 NSSD-SDALEAVKEI-----ADAIIDTVGPATLE-PSLKALRRG-GTLVLVGLPGGGPIP 267

Query: 304 AAHYGLF-LSGRTLKGSLFGG 323
                L  L   ++ GSL G 
Sbjct: 268 LLPAFLLILKEISIVGSLVGT 288

Length = 339

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  156 bits (396), Expect = 1e-44
 Identities = 78/264 (29%), Positives = 116/264 (43%), Gaps = 28/264 (10%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW---ETQAIFPRIFGHE 70
           +AAV    G+PL + EV    P P+ + ++V    +CRSD   W   +     P + GHE
Sbjct: 2   RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
            +G+V  VG  V+ +  G+ V   F+  C TC  C++  SN CE              Q 
Sbjct: 62  FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQ-----------VQP 110

Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
            F+  G          SF+EY  V       V++           L C  +    A  + 
Sbjct: 111 GFTHPG----------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQ 160

Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
           A +  G  V + G G VGLS    A A GA R+I VD + +K E A+  G    +N ++ 
Sbjct: 161 ARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE- 218

Query: 249 NEPVQQVIKRITDGGADYSFECIG 272
            E V   ++ +T GGA  S + +G
Sbjct: 219 VEDVAAAVRDLTGGGAHVSVDALG 242

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  155 bits (393), Expect = 3e-44
 Identities = 91/315 (28%), Positives = 134/315 (42%), Gaps = 41/315 (13%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW--ETQAIFPRIFGHEA 71
           KA V  G G  L  E++    P P E+ +KV    +C SDI  +        P + GHE 
Sbjct: 2   KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHPPLVLGHEF 60

Query: 72  SGIVESVGPGVTEFNEGEHVLTVF-IGECKTCRQCKSDKSNTCE---VLGLERRGVMHSD 127
           SG VE VG GV +   G+ V  V  +  C  C  CK  + + C     +G  R G     
Sbjct: 61  SGTVEEVGSGVDDLAVGDRV-AVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDG----- 114

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
                              +F+EY  V +   +K+      E+  ++    +  L A   
Sbjct: 115 -------------------AFAEYVSVPARNLIKIPDHVDYEEAAMIE-PAAVALHAVRL 154

Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
            A I+ G TVV+ G GT+GL   Q  K  GA R+I VD + EK   A+  G  + +NP +
Sbjct: 155 -AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE 213

Query: 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK--LKPEVA 304
            +    + ++ +T+G GAD   E  G    I  AL     G G  V +G+P   +     
Sbjct: 214 EDV---EKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEE 269

Query: 305 AHYGLFLSGRTLKGS 319
           A   +     T++GS
Sbjct: 270 AFEKILRKELTIQGS 284

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  151 bits (384), Expect = 6e-43
 Identities = 80/282 (28%), Positives = 114/282 (40%), Gaps = 43/282 (15%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIFGHE 70
           KAAV  G    + +EEV V  P P E+ +KV    +C +D+            PRI GHE
Sbjct: 2   KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
            +G +  VG GVT F  G+ V       C  C  C     N C                 
Sbjct: 61  IAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPN--------------- 105

Query: 131 RFSIKGKPVYHY-CAVSSFSEYTVVHS-----GCAVKVSSIAPLEKICL---LSCGLSAG 181
            +   G     Y      F+EY  V +     G  +K+      E+  L   L+C +   
Sbjct: 106 -YKKFG---NLYDGG---FAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCI--- 155

Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
              A   A I  G TV++ G G +GL  A  AKA GA ++I  D N  + E AK  G   
Sbjct: 156 --NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADY 213

Query: 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ 282
            ++  + +  + + ++ +TDG GAD      G       AL+
Sbjct: 214 TIDAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALE 253

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  143 bits (364), Expect = 5e-40
 Identities = 88/293 (30%), Positives = 132/293 (45%), Gaps = 34/293 (11%)

Query: 15  AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI--F----PRIFG 68
           AAV  G G  L +EE  +  P P E+ ++V    +C SD+  ++   I  F    P + G
Sbjct: 1   AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLG 59

Query: 69  HEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           HE++G V +VG GVT    G+ V +   +  C+TC  CKS + N C              
Sbjct: 60  HESAGTVVAVGSGVTHLKVGDRVAIEPGVP-CRTCEFCKSGRYNLCP------------- 105

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
              RF+    P            Y    +    K+     LE+  L+   LS G+ A   
Sbjct: 106 -DMRFA--ATPPVDGT----LCRYVNHPADFCHKLPDNVSLEEGALVE-PLSVGVHAC-R 156

Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP-- 245
            A +  G TV++FG G +GL  A  AKA GA++++  D +P + E AK  G T  +N   
Sbjct: 157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216

Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298
            D  E  +++ + +   G D   EC G    I TA+ +   G G  V +G+ K
Sbjct: 217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGK 268

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  142 bits (360), Expect = 2e-39
 Identities = 80/260 (30%), Positives = 118/260 (45%), Gaps = 39/260 (15%)

Query: 22  GQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWE-TQAIF--PRIFGHEASGIVE 76
            +P  +E V++  P P   E+ ++V    +C SD+  +         PRI GHE SG V 
Sbjct: 7   EKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVV 66

Query: 77  SVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTRFS 133
            VG GV     G+ V+      C  C  C+  + N CE   VLG+ R G           
Sbjct: 67  EVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGF--------- 117

Query: 134 IKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISK 193
                          +EY VV +   +    +  L++  L+   L+ G  A    A ++ 
Sbjct: 118 ---------------AEYIVVPADALLVPEGL-SLDQAALVEP-LAIGAHAVRR-AGVTA 159

Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253
           G TV++ G G +GL V Q AKARGA R+I VD + E+ E A+  G  + +N  D  E V 
Sbjct: 160 GDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVA 216

Query: 254 QVIKRITDG-GADYSFECIG 272
             ++ +TDG GAD   +  G
Sbjct: 217 ARLRELTDGEGADVVIDATG 236

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  141 bits (358), Expect = 3e-39
 Identities = 91/291 (31%), Positives = 129/291 (44%), Gaps = 38/291 (13%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI--FPRIFGHEA 71
           KA V  G G+ L VEEV V  P P+E+ IKV    +C +D+  +E +     P + GHE 
Sbjct: 2   KALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAPPLVPGHEF 60

Query: 72  SGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
           +G+V +VG  VT F  G+ V  V     C  C  C+  + N CE L     GV  +    
Sbjct: 61  AGVVVAVGSKVTGFKVGDRV-AVDPNIYCGECFYCRRGRPNLCENLTA--VGVTRN---- 113

Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSAGLGAAWN 187
                G           F+EY VV +    K+      E+  L   LSC +        +
Sbjct: 114 ----GG-----------FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHG-----LD 153

Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
           +  I  G +V++FG G +GL +AQ  K  GASR+   + N EK E AK  G TE ++P+ 
Sbjct: 154 LLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR 213

Query: 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298
            +   Q   K     G D   E  G    +  A++    G G  +  GV  
Sbjct: 214 EDPEAQ---KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYA 260

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  140 bits (355), Expect = 2e-38
 Identities = 82/297 (27%), Positives = 126/297 (42%), Gaps = 29/297 (9%)

Query: 13  CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIFGH 69
            +AAV  G G+PL + EV +   +P  + ++V    +C SD+        +   P I GH
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGH 60

Query: 70  EASGIVESVGPGVTEFNEGEH-------VLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
           E  G V ++G GVT    GE          +V    C  C +C       CE     R+ 
Sbjct: 61  EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAP-CGRCYRCLVGDPTKCE----NRKK 115

Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA-VKVSSIAPLEKICLLSCGLSAG 181
             H        + G           ++E+  +  G A V+V    P E     +C L+  
Sbjct: 116 YGHEASCDDPHLSG----------GYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATV 165

Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
           L A      +  G TVV+ G G +GL     AK  GA R+I +D +PE+ E A+ FG   
Sbjct: 166 LAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADA 225

Query: 242 FLNPNDNNEP-VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
            ++ ++  +P  + +++ IT G GAD   E  G    +   L+    G G  V +G 
Sbjct: 226 TIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGS 281

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  138 bits (349), Expect = 6e-38
 Identities = 83/268 (30%), Positives = 114/268 (42%), Gaps = 43/268 (16%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR-----IFG 68
           KAA+     +PL +EEV    P P E+ IKV    +C  D+  W  +  FPR     I G
Sbjct: 2   KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFW--KGFFPRGKYPLILG 59

Query: 69  HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMH 125
           HE  G VE VG GV  F  G+ V+  +   C  C  C S + N C      G E  G   
Sbjct: 60  HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDG--- 116

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
                                 F+EY  V     VK+      E   L +C +   + A 
Sbjct: 117 ---------------------GFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL 155

Query: 186 WNVADISKGSTVVI-FGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
              A + KG TV++    G VG+   Q AKA GA R+I V  +PEK +  K  G    ++
Sbjct: 156 -KRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVID 213

Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIG 272
            +  +E V+++      GGAD   E +G
Sbjct: 214 GSKFSEDVKKL------GGADVVIELVG 235

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  135 bits (342), Expect = 7e-37
 Identities = 93/335 (27%), Positives = 141/335 (42%), Gaps = 32/335 (9%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR----IFGH 69
           + AV  G    + + E  V  P P E+ ++V  + LC SD+  +      P     I GH
Sbjct: 2   RGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGH 60

Query: 70  EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
           E +G+V +VGPGVT F  G+ V+      C  CR C+      C                
Sbjct: 61  EPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCT--------------- 105

Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
                  +  Y +      +EY +V     + +          LL CG+      A    
Sbjct: 106 -----SKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTA-YHALRRV 159

Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
            +S   TV++ G G VGL     A+A GA  +IGVD +PE+ E AKA G    +N   ++
Sbjct: 160 GVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD 219

Query: 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV-PKLKPEVAAHYG 308
             VQ++ +  +  GAD + EC G+T     AL++    WG  V +G   +L  EV+    
Sbjct: 220 --VQEIRELTSGAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGEGGELTIEVSND-- 274

Query: 309 LFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN 343
           L    RTL GS +       +    + R+  +V  
Sbjct: 275 LIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDR 309

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  134 bits (340), Expect = 1e-36
 Identities = 84/267 (31%), Positives = 114/267 (42%), Gaps = 31/267 (11%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWE---TQAIFPRIFGH 69
           KA V  G G+ + +EEV     Q P +  ++V  TS+C SD+  +      A    I GH
Sbjct: 2   KALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGH 60

Query: 70  EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
           E  G V  VG  V     G+ V    I  C  CR C+      CE               
Sbjct: 61  EFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGW--------- 111

Query: 130 TRFSIKGKPVYHYCAVS-SFSEYTVVH--SGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
                          +    +EY  V        K+    P E   +LS  L  G   A 
Sbjct: 112 ----------KLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAE 161

Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
             A I  GSTV + G G VGL    GA+  GA+RII VD+NPE+ + AK  G T+ +NP 
Sbjct: 162 L-AGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220

Query: 247 DNNEPVQQVIKRITDG-GADYSFECIG 272
            N + V+Q+++ +T G G D   E +G
Sbjct: 221 -NGDIVEQILE-LTGGRGVDCVIEAVG 245

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  131 bits (331), Expect = 4e-35
 Identities = 81/280 (28%), Positives = 114/280 (40%), Gaps = 40/280 (14%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TAWETQAIFPR---IFGH 69
           KA    G G+     E  +    P +  ++    + C SD+ T W   A   R   I GH
Sbjct: 2   KAFAMLGIGKV-GWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWG-GAPGERHGMILGH 59

Query: 70  EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV-MHSDQ 128
           EA G+VE VG  V +F  G+ V+   I         +              RG    S  
Sbjct: 60  EAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQ--------------RGYPSQSGG 105

Query: 129 QT---RFS-IKGKPVYHYCAVSSFSEYTVVHSGCA--VKVSSIAPLEKICLLSCGLSAGL 182
                +FS  K            F+EY  V+   A    +      E+  +L   +S G 
Sbjct: 106 MLGGWKFSNFKD---------GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF 156

Query: 183 GAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
             A   A+I  G TV +FG+G VGL    GA+ RGA RII V + P + E AK +G T+ 
Sbjct: 157 HGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDI 215

Query: 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTAL 281
           ++   N + V+Q I ++T G G D      G       AL
Sbjct: 216 VDYK-NGDVVEQ-ILKLTGGKGVDAVIIAGGGQDTFEQAL 253

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  124 bits (315), Expect = 5e-33
 Identities = 90/329 (27%), Positives = 137/329 (41%), Gaps = 56/329 (17%)

Query: 13  CKAAV--AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRI 66
            KAAV   +G  +P  V++V V  P P E+ +K+  + +C +D+ A    W  +   P I
Sbjct: 1   MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLI 59

Query: 67  FGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
            GHE +G+V +VGPGV+    G+ V +      C  C  C++     C            
Sbjct: 60  GGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCP----------- 108

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV------SSIAPLEKICLLSCGLS 179
           + + + +++ G          +F+EY +  +     +         APL         L 
Sbjct: 109 NQKNSGYTVDG----------TFAEYAIADARYVTPIPDGLSFEQAAPL---------LC 149

Query: 180 AGLGA--AWNVADISKGSTVVIFG----LGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
           AG+    A   A +  G  VVI G    LG +G+   Q AKA G  R+I +D   EK E 
Sbjct: 150 AGVTVYKALKKAGLKPGDWVVISGAGGGLGHLGV---QYAKAMGL-RVIAIDVGDEKLEL 205

Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVT 293
           AK  G   F++   ++  V+ V +    GGA               AL     G G  V 
Sbjct: 206 AKELGADAFVDFKKSD-DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVC 263

Query: 294 LGVPKLKPEVAAHYGLFLSGRTLKGSLFG 322
           +G+P         + L L G T+ GSL G
Sbjct: 264 VGLPPGGFIPLDPFDLVLRGITIVGSLVG 292

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  124 bits (313), Expect = 1e-32
 Identities = 78/278 (28%), Positives = 122/278 (43%), Gaps = 34/278 (12%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIF 67
           KAA  +  G+PL +E+V V  P P ++ ++V    +C SD+   +           P   
Sbjct: 2   KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           GHE +G VE VG GV    EG+ V+      C TCR C+  + N CE       G     
Sbjct: 62  GHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCE--NARFPG----- 114

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC-GLSAGLGAAW 186
                   G           F+EY +V S   VK+       +   L+  GL+A      
Sbjct: 115 ----IGTDG----------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKK 160

Query: 187 NVADISKGSTVVIFGLGTVGLSVA-QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            +  +  GSTVV+ G+G +G  +A Q  +A   + +I VD + E  + A+  G    LN 
Sbjct: 161 ALPYLDPGSTVVVIGVGGLG-HIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNA 219

Query: 246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ 282
           +D+   V + ++ +T G GAD   + +G    +  A +
Sbjct: 220 SDD---VVEEVRELTGGRGADAVIDFVGSDETLALAAK 254

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  121 bits (307), Expect = 2e-31
 Identities = 78/283 (27%), Positives = 117/283 (41%), Gaps = 48/283 (16%)

Query: 16  AVAW-GAGQPLVVEEVEVNPP---QPEEIRIKVVCTSLCRSDI-----TAWETQAIFPRI 66
           A+ W G      V   EV  P    P +  ++V  T++C SD+          +     I
Sbjct: 3   ALVWHG---KGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKK--GDI 57

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHE  G+VE VGP V     G+ V+  F   C  C  CK    + C+            
Sbjct: 58  LGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCD------------ 105

Query: 127 DQQTRFSIKGKPVYHY--CAVSSFS-----------EYTVV---HSGCAVKVSSIAPLEK 170
              T  S +   +Y +    +  +S           EY  V     G   K+      EK
Sbjct: 106 --NTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGP-FKIPDDLSDEK 162

Query: 171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230
              LS  L  G  AA   A++  G TV ++G G VGL  A+ AK  GA R+I +D  PE+
Sbjct: 163 ALFLSDILPTGYHAAEL-AEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPER 221

Query: 231 CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
            E A++    E +N  + ++ V + ++ +T G G D   + +G
Sbjct: 222 LEMARSHLGAETINFEEVDDVV-EALRELTGGRGPDVCIDAVG 263

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  120 bits (303), Expect = 3e-31
 Identities = 78/265 (29%), Positives = 109/265 (41%), Gaps = 32/265 (12%)

Query: 24  PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI------TAWETQAIFPRIFGHEASGIVES 77
            LV+EEV V  P P E+ +KV    +C SD+          T+   P   GHE +G V  
Sbjct: 13  LLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTK--LPLTLGHEIAGTVVE 70

Query: 78  VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGK 137
           VG GVT F  G+ V    +  C  C  C+  + N C            +       I G 
Sbjct: 71  VGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCL-----------NQGMPGLGIDG- 118

Query: 138 PVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV 197
                     F+EY VV +   V V    P  +  + +  +     A     ++  G TV
Sbjct: 119 ---------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETV 169

Query: 198 VIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIK 257
           ++ GLG +GL+  Q AKA GA  +I VD   EK E AK  G  E LN  D++   +    
Sbjct: 170 LVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLDDSP--KDKKA 226

Query: 258 RITDGGADYSFECIGDTGMITTALQ 282
               GG D  F+ +G       A +
Sbjct: 227 AGLGGGFDVIFDFVGTQPTFEDAQK 251

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  115 bits (290), Expect = 2e-29
 Identities = 83/273 (30%), Positives = 113/273 (41%), Gaps = 26/273 (9%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQAIFP-RIFGHEA 71
           KA V  G G   V E        P +  +KV   ++C SD+  +       P  + GHE 
Sbjct: 2   KAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEF 61

Query: 72  SGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTR 131
            G V  VGP V     G+ V++ F   C  C  C+  +S  C   GL             
Sbjct: 62  VGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGL------------- 108

Query: 132 FSIKGKPVYHYCAVSSFSEYTVV--HSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA 189
           F   G P        + +EY  V    G  +K+      E   LL   L  G   A   A
Sbjct: 109 FGYAGSPNLD----GAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR-A 163

Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
            +  G TV + G G VGL     A+  GA+R+  VD  PE+ E+A A G  E +N  D  
Sbjct: 164 QVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFED-A 221

Query: 250 EPVQQVIKRITDG-GADYSFECIGDTGMITTAL 281
           EPV++V +  T+G GAD   E +G    +  A 
Sbjct: 222 EPVERV-REATEGRGADVVLEAVGGAAALDLAF 253

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  114 bits (288), Expect = 3e-29
 Identities = 94/298 (31%), Positives = 128/298 (42%), Gaps = 49/298 (16%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-----TAWETQAI-FPRIF 67
           KA V   AG    + EV V  P P E+ IKV+  S+C +D+       W    I  P IF
Sbjct: 2   KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIF 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVL--TVFIGECKTCRQCKSDKSNTCE---VLGLERRG 122
           GHE +G V  VG GVT    G++V   T  +  C  C QC++   + C+   +LG++  G
Sbjct: 62  GHEFAGEVVEVGEGVTRVKVGDYVSAETHIV--CGKCYQCRTGNYHVCQNTKILGVDTDG 119

Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGL 182
                                    F+EY VV      K     P E   + S  +   L
Sbjct: 120 C------------------------FAEYVVVPEENLWKNDKDIPPE---IAS--IQEPL 150

Query: 183 GAAWN---VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
           G A +     D+S G +V+I G G +GL     AKA GAS +I  D NP + E AK  G 
Sbjct: 151 GNAVHTVLAGDVS-GKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGA 209

Query: 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
              +NP +  E V +V       G D   E  G+   I   L++   G G    LG+P
Sbjct: 210 DVVINPRE--EDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLP 264

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  113 bits (286), Expect = 1e-28
 Identities = 77/274 (28%), Positives = 112/274 (40%), Gaps = 40/274 (14%)

Query: 16  AVAWGAGQPLVVEEVEVNPPQ---PEEIRIKVVCTSLCRSDITAWE--TQAIFPRIFGHE 70
                 G P  V   +V  P+   P +  +++  T++C SD+  +   T A    + GHE
Sbjct: 2   KAVV-YGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPGLVLGHE 60

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
           A G VE VG  V     G+ V+  F   C  CR CK   +  C  +   R G        
Sbjct: 61  AMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAG-------- 112

Query: 131 RFSIKGKPVYHYCAVSSF----SEYTVV---HSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
                    Y Y  +  +    +EY  V                 EK   L   LS    
Sbjct: 113 -------GAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLM--LSDIFP 163

Query: 184 AAWNVADISK---GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
             W+  +++    G TV +FG G VGL  A  A  RGASR+  VD  PE+ + A++ G  
Sbjct: 164 TGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI 223

Query: 241 EFLNPND--NNEPVQQVIKRITDGGADYSFECIG 272
               P D  + +PV+Q I  +  GG D + +C+G
Sbjct: 224 ----PIDFSDGDPVEQ-ILGLEPGGVDRAVDCVG 252

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  110 bits (277), Expect = 1e-27
 Identities = 98/338 (28%), Positives = 139/338 (41%), Gaps = 43/338 (12%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPP--QPEEIRIKVVCTSLCRSDITAW--ETQAIFPRIFGH 69
           +A V  G G  + VEEV  +P   +P +  I+VV T +C SD+  +   +    P   GH
Sbjct: 2   RATVIHGPGD-IRVEEVP-DPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPIGH 59

Query: 70  EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
           E  G+VE VG  VT    G+ V+  F     TC  C++  + +C        G      Q
Sbjct: 60  EFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCV--HGGFWGAFVDGGQ 117

Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHS-GCAVKVSSIAP-----LEKICLLSCGLSAGLG 183
             +                    V  + G  VKV          L  +  LS  +  G  
Sbjct: 118 GEY------------------VRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHH 159

Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
           AA   A +  GSTVV+ G G VGL     AK  GA RII +  + ++   A+ FG T+ +
Sbjct: 160 AA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIV 218

Query: 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 302
                 E V +V + +T G GAD   EC+G    +  A+     G G    +GVP    E
Sbjct: 219 -AERGEEAVARV-RELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGGVE 275

Query: 303 VAAHYGLFLSGRTLKGSLFGGWKP-KTDLPSLVNRYLK 339
           +     LF     L     GG  P +  LP L++  L 
Sbjct: 276 LDVRE-LFFRNVGLA----GGPAPVRRYLPELLDDVLA 308

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  109 bits (275), Expect = 2e-27
 Identities = 84/317 (26%), Positives = 129/317 (40%), Gaps = 40/317 (12%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ---AIFPRIFGHE 70
           KAAV   AG PL  EEV V  P P E+ IK+    +C +D+ A E     + +P + GHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 71  ASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
             G V  VG GV     G+ V +   +G C  C  C+    N C+               
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQ-----------KAVN 109

Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN-- 187
           T ++ +G           ++EY V  +   V +    PL +   L C   AG+   ++  
Sbjct: 110 TGYTTQG----------GYAEYMVADAEYTVLLPDGLPLAQAAPLLC---AGI-TVYSAL 155

Query: 188 -VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
             A    G  V + G+G +G    Q A+A G    + +  +P+K E A+  G  E ++  
Sbjct: 156 RDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG 214

Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
              +           GGAD     +        AL     G G  V +G+P+  P     
Sbjct: 215 AELDEQA------AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDI 267

Query: 307 YGLFLSGRTLKGSLFGG 323
           + L +  +++ GS  GG
Sbjct: 268 FPLIMKRQSIAGSTHGG 284

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  109 bits (274), Expect = 4e-27
 Identities = 77/274 (28%), Positives = 112/274 (40%), Gaps = 46/274 (16%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIR-----IKVVCTSLCRSD--ITAWETQAIFP-R 65
           KA V  G G+ +  E+     P+P         +K++ T++C +D  I   +   + P R
Sbjct: 2   KALVYHGPGK-ISWEDR----PKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGR 56

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE----VLGLERR 121
           I GHE  G+VE VG  VT F  G+ VL   I  C TC  C+    + CE    +LG    
Sbjct: 57  ILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLID 116

Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYT-VVHSGCA-VKVSSIAPLEKICLLSCGLS 179
           G                          +EY  + H+  +  K+      E   +LS  L 
Sbjct: 117 GTQ------------------------AEYVRIPHADNSLYKLPEGVDEEAAVMLSDILP 152

Query: 180 AGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
            G         +  G TV I G G VGL+    A+    S+II VD +  + E AK  G 
Sbjct: 153 TGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGA 212

Query: 240 TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
           T  +N    +    + +  +TDG G D   E +G
Sbjct: 213 THTVNSAKGD--AIEQVLELTDGRGVDVVIEAVG 244

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  103 bits (258), Expect = 6e-27
 Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 5/133 (3%)

Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-G 263
           VGL+  Q AKA GA+R+I VD + EK E AK  G    +N  D  E   + ++ +T G G
Sbjct: 2   VGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRD--EDFVERVRELTGGRG 59

Query: 264 ADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323
            D   +C+G    +  AL+      G  V +G+P   P       L L   T+ GSL GG
Sbjct: 60  VDVVIDCVGAPATLEQALE-LLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGG 118

Query: 324 -WKPKTDLPSLVN 335
             + +  L  L +
Sbjct: 119 REEFEEALELLAS 131

Length = 131

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 2e-26
 Identities = 76/271 (28%), Positives = 107/271 (39%), Gaps = 50/271 (18%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR-----IFG 68
           KA +  G  Q   +EEV    P  +E+ IKV    LC  D+     Q  +PR     I G
Sbjct: 2   KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQL--QGFYPRMKYPVILG 59

Query: 69  HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMH 125
           HE  G VE VG  V  F  G+ V ++      TC  C+S +   C+     G E  G   
Sbjct: 60  HEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGF-- 117

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
                                 F+EY  V     VKV      E   ++ C     +   
Sbjct: 118 ----------------------FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGM-VYRG 154

Query: 186 WNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---VTE 241
              A + KG TV++ G  G VG+   Q AKA GA ++I V ++  K +    +    +  
Sbjct: 155 LRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKYADYVIVG 213

Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIG 272
               +  +E V    K+I  GGAD   E +G
Sbjct: 214 ----SKFSEEV----KKI--GGADIVIETVG 234

Length = 334

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  106 bits (268), Expect = 3e-26
 Identities = 80/273 (29%), Positives = 114/273 (41%), Gaps = 50/273 (18%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWE------------- 58
           KAA     G+PL  EEVE++ P+P   E+ +KV    +C SD+  W+             
Sbjct: 2   KAAAVVEPGKPL--EEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSL 59

Query: 59  --TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVF--IGECKTCRQCKSDKSNTCE 114
                  P + GHE  G V +VGP   +   G+ VL V+  IG C  C  C +   N C 
Sbjct: 60  DDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVL-VYPWIG-CGECPVCLAGDENLCA 117

Query: 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV-HSGCAVKVSSIAPLEKICL 173
                         + R     +          ++EY +V HS   V    + P      
Sbjct: 118 --------------KGRALGIFQDGG-------YAEYVIVPHSRYLVDPGGLDPALA-AT 155

Query: 174 LSC-GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
           L+C GL+A   A   +  +     VVI G G +GL      KA G + II VD +  K E
Sbjct: 156 LACSGLTA-YSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLE 214

Query: 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD 265
            AKA G    +N +D +   +++IK    GG D
Sbjct: 215 AAKAAGADVVVNGSDPDA-AKRIIK-AAGGGVD 245

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  106 bits (265), Expect = 1e-25
 Identities = 78/268 (29%), Positives = 118/268 (44%), Gaps = 42/268 (15%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----------AIFPRIFGHEASGI 74
           L VE+V V   +P+EI I+V    +C SDI  +ET             FP + GHE SG+
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 75  VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSI 134
           VE  G  V  F +G+ V    +  C  CR C+S   N C+ L               FS 
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE-----------LGFSA 147

Query: 135 KGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL--EKICLLSCGLSAGLGAAWNV---- 188
            G          +F+EY  V++  A +++ +  +  E     +  L      A+N     
Sbjct: 148 DG----------AFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIR 197

Query: 189 -ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
                 G+ VV++G G +GL+    AKA GAS++I  + + E+   AK  G     NP  
Sbjct: 198 GGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTK 257

Query: 248 --NNEPVQQVIKRITDG-GADYSFECIG 272
             +    ++V++ +T G GAD   E  G
Sbjct: 258 MRDCLSGEKVME-VTKGWGADIQVEAAG 284

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  105 bits (263), Expect = 1e-25
 Identities = 77/282 (27%), Positives = 109/282 (38%), Gaps = 54/282 (19%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF---------- 63
           +A V  G      +EEV V  P P EI +KV    +C  DI  +     F          
Sbjct: 2   RAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60

Query: 64  --PRIFGHEASGIVESVGPGVTE--FNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VL 116
             P I GHE  G V  +G G  E     G+ V++  I  C  CR C   +   C+   + 
Sbjct: 61  KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY 120

Query: 117 GLERR--GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL- 173
           G +    G M                       F +  +VH     KV    P E   L 
Sbjct: 121 GFQNNVNGGM------------------AEYMRFPKEAIVH-----KVPDDIPPEDAILI 157

Query: 174 --LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC 231
             L+C L A      + A+I     VV+ G G +GL +   A+ +   ++I +D   E+ 
Sbjct: 158 EPLACALHAV-----DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERL 212

Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
             A+ FG    LNP + +  V + IK +T G G D   E  G
Sbjct: 213 ALARKFGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATG 252

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  104 bits (263), Expect = 1e-25
 Identities = 68/235 (28%), Positives = 100/235 (42%), Gaps = 35/235 (14%)

Query: 14  KAAVAWGAG----QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRI 66
           KA V    G     PL + EV V  P P E+ IKV    +CR+D+   E        P I
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLI 61

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMH 125
            GHE  G VE+VGPGVT F+ G+ V   ++G  C  CR C+S + N C            
Sbjct: 62  PGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLC-----------D 110

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA- 184
           + + T +++ G           ++EY V     A  +      E+   L C   AG+   
Sbjct: 111 NARFTGYTVDG----------GYAEYMVADERFAYPIPEDYDDEEAAPLLC---AGIIGY 157

Query: 185 -AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
            A  +A +  G  + ++G G       Q A+ +GA  +     + E  E A+  G
Sbjct: 158 RALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELG 211

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  101 bits (254), Expect = 1e-24
 Identities = 66/262 (25%), Positives = 97/262 (37%), Gaps = 66/262 (25%)

Query: 20  GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI------TAWETQAIFPRIFGHEASG 73
           G G+   VEE     P P ++ ++V    +C SD+        W      P   GHE  G
Sbjct: 3   GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWG 61

Query: 74  IVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFS 133
            V ++GPGV     G                   D+     V GL               
Sbjct: 62  RVVALGPGVRGLAVG-------------------DR-----VAGLSGGA----------- 86

Query: 134 IKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL--LSCGLSAGLGAAWNVADI 191
                         F+EY +  +  AV + S+   +      L C L+           I
Sbjct: 87  --------------FAEYDLADADHAVPLPSLLDGQAFPGEPLGCALNVF-----RRGWI 127

Query: 192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251
             G TV + G G +GL   Q A A GA R+I +D  P +   A+  G TE     D++E 
Sbjct: 128 RAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEV--VTDDSEA 185

Query: 252 VQQVIKRITDG-GADYSFECIG 272
           + + ++ +T G GAD   E +G
Sbjct: 186 IVERVRELTGGAGADVVIEAVG 207

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score =  101 bits (253), Expect = 2e-24
 Identities = 67/238 (28%), Positives = 104/238 (43%), Gaps = 50/238 (21%)

Query: 37  PEEIRIKVVCTSLCRSDITAWETQAIFPRIF-----------GHEASGIVESVGPGVTEF 85
            +++ +KV  + LC SDI         PRIF           GHE SG VE+VG GV + 
Sbjct: 25  QDDVLVKVASSGLCGSDI---------PRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDL 75

Query: 86  NEGEHVLTVFIGECKTCRQCKSDKSNTC---EVLGLERRGVMHSDQQTRFSIKGKPVYHY 142
           + G+ V  V +  C TC +C     + C   + +G  R G                    
Sbjct: 76  HPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDG-------------------- 115

Query: 143 CAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL 202
                 +EY VV       + +  P+E    +   ++ GL  A+++A   +G  V+I G 
Sbjct: 116 ----GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGL-HAFHLAQGCEGKNVIIIGA 169

Query: 203 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP-VQQVIKRI 259
           GT+GL   Q A A GA  +  +D N EK   AK+ G  +  N  + + P +Q V++ +
Sbjct: 170 GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227

Length = 347

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 99.7 bits (249), Expect = 7e-24
 Identities = 69/268 (25%), Positives = 104/268 (38%), Gaps = 58/268 (21%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWETQAI----FPRIF 67
           KA V    G P V++ VEV  P+P   E+ ++V    +   D+   +  A      P I 
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           G EA+G+V +VG GVT F  G+                         V  L         
Sbjct: 62  GSEAAGVVVAVGSGVTGFKVGD------------------------RVAAL--------- 88

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC-GLSAGLGAAW 186
                               ++EY VV +   V +      E+   L   GL+A L    
Sbjct: 89  ------------GGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFD 136

Query: 187 NVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             A +  G TV++ G  G VG +  Q AKA GA  ++ V ++ EK E  K  G    +N 
Sbjct: 137 -RAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194

Query: 246 NDNNEPVQQVIKRITDG-GADYSFECIG 272
            +  E   + ++ +T G G D   + +G
Sbjct: 195 RE--EDFVEQVRELTGGKGVDVVLDTVG 220

Length = 326

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 99.6 bits (249), Expect = 1e-23
 Identities = 71/282 (25%), Positives = 108/282 (38%), Gaps = 62/282 (21%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIF 67
           KA V  G G P  L   ++    P P+E+ ++V   +L   D+             P I 
Sbjct: 2   KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHIL 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVM 124
           G + +G+VE+VGPGVT    G+ V+      C  C  C + + N C    +LG    G  
Sbjct: 62  GSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGY 121

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS----- 179
                                   +EY  V    A  +  I            LS     
Sbjct: 122 ------------------------AEYVAVP---ARNLLPIPD---------NLSFEEAA 145

Query: 180 -AGL--GAAWNV----ADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKC 231
            A L    AW++    A +  G TV++ G G+ VG +  Q AK  GA  +I    + +K 
Sbjct: 146 AAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKL 204

Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
           E+AK  G    ++     E   + ++ +T   G D   E +G
Sbjct: 205 ERAKELGADYVIDY--RKEDFVREVRELTGKRGVDVVVEHVG 244

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score = 98.5 bits (246), Expect = 1e-23
 Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 31/262 (11%)

Query: 27  VEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT 83
           + EV    P P E+ IKV    +C SD+  ++        P + GHE SG +  VGP V 
Sbjct: 16  LREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVE 75

Query: 84  EFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHY 142
            +  G+ V++      C  C  C+    N C      R+G+                   
Sbjct: 76  GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCP----HRKGI-----------------GT 114

Query: 143 CAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL 202
            A   F+EY +V      ++     LE   L    L+  + A    + I  G TVV+FG 
Sbjct: 115 QADGGFAEYVLVPEESLHELPENLSLEAAALTE-PLAVAVHAVAERSGIRPGDTVVVFGP 173

Query: 203 GTVGLSVAQGAKARGASRII-GVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261
           G +GL  AQ AK +GA+ ++ G + +  + + AK  G       N   E + +++  ITD
Sbjct: 174 GPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA---VNGGEEDLAELVNEITD 230

Query: 262 G-GADYSFECIGDTGMITTALQ 282
           G GAD   EC G    +  AL+
Sbjct: 231 GDGADVVIECSGAVPALEQALE 252

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 98.8 bits (246), Expect = 2e-23
 Identities = 90/321 (28%), Positives = 130/321 (40%), Gaps = 50/321 (15%)

Query: 21  AGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-----TAWETQAI-FPRIFGHEASGI 74
            G    + EV V  P P E+ IKV+ TS+C +D+       W    I  P++ GHE +G 
Sbjct: 7   PGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGE 66

Query: 75  VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTR 131
           V  +GPGV     G++V       C  C  C+  + + C+   + G++  G         
Sbjct: 67  VVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGC-------- 118

Query: 132 FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA-- 189
                           F+EY VV +    K     P E        +   LG A +    
Sbjct: 119 ----------------FAEYAVVPAQNIWKNPKSIPPE-----YATIQEPLGNAVHTVLA 157

Query: 190 -DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
             IS G +V++ G G +GL     AKA GA  +I  D N  + E AK  G T  +NP   
Sbjct: 158 GPIS-GKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK- 215

Query: 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 307
            E V + +  +TDG G D   E  G    +   LQ+   G G    LG+P  K  +    
Sbjct: 216 -EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTN 273

Query: 308 GLFLSGRTLKG----SLFGGW 324
            +   G T+ G     +F  W
Sbjct: 274 KVIFKGLTIYGITGRHMFETW 294

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 97.2 bits (243), Expect = 7e-23
 Identities = 78/318 (24%), Positives = 114/318 (35%), Gaps = 50/318 (15%)

Query: 21  AGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA---WETQAIFPRIFGHEASGIVE 76
           A   L     E  P  P+++ IK+    +C SD+ T    W     +P + GHE  GIV 
Sbjct: 8   ASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG-PTKYPLVPGHEIVGIVV 66

Query: 77  SVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIK 135
           +VG  VT+F  G+ V +   +  C TC QCKS +   C               +   +  
Sbjct: 67  AVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCP--------------KGVVTYN 112

Query: 136 GKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-------AWNV 188
           GK          ++++ VV      K+           L C      G           V
Sbjct: 113 GKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA-----GITVYSPLKRNGV 167

Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
                G  V + G+G +G    + AKA GA  +     +P K E A   G  EF+   D 
Sbjct: 168 G---PGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDP 223

Query: 249 NEPVQQVIKRITDGGADYSFECIGDTGMIT---TALQSCCDGWGLAVTLGVPKLKPEVAA 305
                          A  S + I DT   +       S     G  V +G P  +P    
Sbjct: 224 EAM----------KKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAP-EEPLPVP 272

Query: 306 HYGLFLSGRTLKGSLFGG 323
            + L    +++ GSL GG
Sbjct: 273 PFPLIFGRKSVAGSLIGG 290

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 94.9 bits (237), Expect = 5e-22
 Identities = 78/311 (25%), Positives = 121/311 (38%), Gaps = 74/311 (23%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-----TAWETQAI-FPRIF 67
           KA V   A   L + +V V  P P ++ IKV  T++C +D+       W  + I  P + 
Sbjct: 2   KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVV 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKSDKSNTCE---VLGLER 120
           GHE  G V  VG  VT F  G+ V     GE    C  CR C++ + + C     +G+ R
Sbjct: 62  GHEFVGEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNR 117

Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180
            G                        +F+EY V+ +    K+    P +           
Sbjct: 118 PG------------------------AFAEYLVIPAFNVWKIPDDIPDD----------- 142

Query: 181 GLGA-------------AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227
            L A             ++++     G  V+I G G +G+  A  AK  GA  ++  D N
Sbjct: 143 -LAAIFDPFGNAVHTALSFDLV----GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVN 197

Query: 228 PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCD 286
             + E A+  G T  +N     E ++ V+  +    G D   E  G        L +   
Sbjct: 198 EYRLELARKMGATRAVNVAK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNH 255

Query: 287 GWGLAVTLGVP 297
           G  +A+ LG+P
Sbjct: 256 GGRIAM-LGIP 265

Length = 341

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 90.4 bits (225), Expect = 2e-20
 Identities = 74/265 (27%), Positives = 103/265 (38%), Gaps = 32/265 (12%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI------FPRIFGHEASGIVESV 78
           L VEE     P P E+R++V    +C SD+  ++           P + GHE SG+VE+V
Sbjct: 9   LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAV 68

Query: 79  GPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGK 137
           GPGVT    G+ V  V     C TC  C++ + N C                 RF   G 
Sbjct: 69  GPGVTGLAPGQRV-AVNPSRPCGTCDYCRAGRPNLCL--------------NMRF--LGS 111

Query: 138 PVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV 197
            +        F EY VV +   V +     L     L+  L+  L A  N A    G  V
Sbjct: 112 AMRFPHVQGGFREYLVVDASQCVPLPDGLSLR-RAALAEPLAVALHAV-NRAGDLAGKRV 169

Query: 198 VIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP-NDNNEPVQQVI 256
           ++ G G +G  V   A+  GA+ I+  D        A+A G  E +N   D         
Sbjct: 170 LVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADK 229

Query: 257 KRITDGGADYSFECIGDTGMITTAL 281
                   D  FE  G    + +AL
Sbjct: 230 GDF-----DVVFEASGAPAALASAL 249

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score = 83.8 bits (208), Expect = 4e-20
 Identities = 37/132 (28%), Positives = 52/132 (39%), Gaps = 30/132 (22%)

Query: 37  PEEIRIKVVCTSLCRSDI---TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
           P E+ ++V    +C SD+            P I GHE +GIVE VGPGVT    G+ V+ 
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60

Query: 94  VFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
             +  C  C  C+  + N C     LG+   G                         F+E
Sbjct: 61  YPLIPCGKCAACREGRENLCPNGKFLGVHLDG------------------------GFAE 96

Query: 151 YTVVHSGCAVKV 162
           Y VV +   V +
Sbjct: 97  YVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 86.6 bits (215), Expect = 2e-19
 Identities = 63/240 (26%), Positives = 84/240 (35%), Gaps = 64/240 (26%)

Query: 64  PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
           P   G+ + G V  VG GVT F  G+ V                                
Sbjct: 21  PLPPGYSSVGRVVEVGSGVTGFKPGDRVF------------------------------C 50

Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
                            H       +E  VV +   V +    P E+  L +   +A L 
Sbjct: 51  FGP--------------H-------AERVVVPANLLVPLPDGLPPERAALTALAATA-LN 88

Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
              + A+   G  V + GLG VGL  AQ AKA GA  ++GVD +  + E A+A G     
Sbjct: 89  GVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPA--- 144

Query: 244 NPNDNNEPVQQ-VIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 302
                 +PV       I   GAD   E  G    + TAL+   D  G  V +G   LKP 
Sbjct: 145 ------DPVAADTADEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLKPL 197

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 85.6 bits (213), Expect = 7e-19
 Identities = 70/262 (26%), Positives = 104/262 (39%), Gaps = 70/262 (26%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPRIFGHEASGIVESV 78
           L  E+V V  P P E+ ++     +       RS +         P + G E +G+VE+V
Sbjct: 14  LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLP----LPFVLGVEGAGVVEAV 69

Query: 79  GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKP 138
           GPGVT F  G+ V                                               
Sbjct: 70  GPGVTGFKVGDRV----------------------------------------------- 82

Query: 139 VYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAG--LGAAWNVADISKGS 195
            Y      +++EY VV +   VK+   I+      LL  GL+A   L   + V     G 
Sbjct: 83  AYAG-PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVK---PGD 138

Query: 196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQ 254
           TV++    G VGL + Q AKA GA  +IG  ++ EK E A+A G    +N  D +   + 
Sbjct: 139 TVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDEDFVER- 196

Query: 255 VIKRITDG-GADYSFECIG-DT 274
            ++ IT G G D  ++ +G DT
Sbjct: 197 -VREITGGRGVDVVYDGVGKDT 217

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 85.1 bits (211), Expect = 1e-18
 Identities = 70/301 (23%), Positives = 110/301 (36%), Gaps = 53/301 (17%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF---------- 63
           +AAV      PLVV +V    P P ++ +KV+   +C SD+ A                 
Sbjct: 2   RAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLM 59

Query: 64  ----PRIFGHEASGIVESVGPGV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL 118
                 + GHE  G V   GPG   +   G  V ++ +  C     C    S        
Sbjct: 60  DLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPE------ 113

Query: 119 ERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGL 178
                                    A   ++EY ++     ++V     +E   L    L
Sbjct: 114 -------------------------APGGYAEYMLLSEALLLRVPDGLSMEDAALTE-PL 147

Query: 179 SAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
           + GL A    A ++ G   ++ G G +GL+V    KARG   I+  D +PE+   A A G
Sbjct: 148 AVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMG 206

Query: 239 VTEFLNPNDNNEP--VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
               ++P  ++        + R         FEC+G  G+I   ++    G G  V +GV
Sbjct: 207 ADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGV 265

Query: 297 P 297
            
Sbjct: 266 C 266

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 85.0 bits (211), Expect = 2e-18
 Identities = 76/326 (23%), Positives = 127/326 (38%), Gaps = 59/326 (18%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIFGHE 70
           KA      G PL + E +V  P P E+ IKV    +C SD    E       +PR+ GHE
Sbjct: 2   KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61

Query: 71  ASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHS 126
             G +++VG GV+ +  G+ V +    G C TC  C+      CE   V G+ R G    
Sbjct: 62  VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDG---- 117

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV------SSIAPLEKICLLSCGLSA 180
                                ++EY +  +    ++      +  APL         L A
Sbjct: 118 --------------------GYAEYMLAPAEALARIPDDLDAAEAAPL---------LCA 148

Query: 181 GLGAAWNV---ADISKGSTVVIFGLGTVG-LSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
           G+   +N    +    G  V + G+G +G L+V Q A   G  R + +    +K + A+ 
Sbjct: 149 GV-TTFNALRNSGAKPGDLVAVQGIGGLGHLAV-QYAAKMGF-RTVAISRGSDKADLARK 205

Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
            G   +++ +   E V + ++ +  GGA        +   I+  +       G  + LG 
Sbjct: 206 LGAHHYIDTSK--EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGA 260

Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFG 322
                 V+    L +  +++ G   G
Sbjct: 261 AGEPVAVSP-LQLIMGRKSIHGWPSG 285

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 84.1 bits (209), Expect = 2e-18
 Identities = 69/284 (24%), Positives = 99/284 (34%), Gaps = 91/284 (32%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPE----EIRIKVVCTSLCRSDIT------AWETQAIF 63
           KA      G P V+E  +V  P PE    E+ +KV    +   D+               
Sbjct: 2   KAVRIHEYGGPEVLELADV--PTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTL 59

Query: 64  PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
           P I GH+ +G+V +VGPGVT F  G+                        EV G+     
Sbjct: 60  PLIPGHDVAGVVVAVGPGVTGFKVGD------------------------EVFGM----- 90

Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS---- 179
                 T F+  G          +++EY VV          +A           LS    
Sbjct: 91  ------TPFTRGG----------AYAEYVVVP------ADELALKPA------NLSFEEA 122

Query: 180 -----AGLGAAWN----VADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPE 229
                AGL  AW     +  +  G TV+I G  G VG    Q AKARGA R+I    +  
Sbjct: 123 AALPLAGL-TAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIAT-ASAA 179

Query: 230 KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 273
             +  ++ G  E ++            +    GG D   + +G 
Sbjct: 180 NADFLRSLGADEVIDYTK-----GDFERAAAPGGVDAVLDTVGG 218

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 83.4 bits (206), Expect = 6e-18
 Identities = 66/238 (27%), Positives = 106/238 (44%), Gaps = 34/238 (14%)

Query: 20  GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW----ETQAIFPRIFGHEASGIV 75
             G+P+V   VE+      ++ +KV    +C +D++ +     T    P   GHE SG V
Sbjct: 6   EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRV 65

Query: 76  ESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIK 135
              G G   +  G+ V+   +  C  C  CK+ +   C      R   M  +      ++
Sbjct: 66  IQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTIC------RAQKMPGN-----DMQ 113

Query: 136 GKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA----PLEKICLLSCGLSAGLGAAWNVA 189
           G           F+ + VV +   C V  + +A    PLE + +++  ++    AA   A
Sbjct: 114 G----------GFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ-A 162

Query: 190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
            + KG  V++ G G VG  + Q AKA GA+ ++ +D +PEK E  K FG    LNP D
Sbjct: 163 GLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKD 219

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 81.8 bits (202), Expect = 8e-18
 Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 32/240 (13%)

Query: 66  IFGHEASGIVESVGPGVTEFNEGEH-------VLTVFIGECKTCRQCKSDKSNTCEVLGL 118
           + GHE  G V ++  G T  ++G         V +V +  C  C +C+      C+ L  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVP-CGRCFRCRRGLPQKCDSL-- 57

Query: 119 ERRGVMHSDQQTRFSIKGKPVYHYCAVS-SFSEYTVVHSGCA-VKVSSIAPLEKICLLSC 176
             R   H           + +     +S  ++E+  + +G A V V    P        C
Sbjct: 58  --RKYGH-----------EALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGC 104

Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
             +  + A     D+ KG  V++ G G +GL+ A  A A GA+R++  D +P++ E A +
Sbjct: 105 ATATVMAALEAAGDL-KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALS 163

Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295
           FG T    P    E + +    + +G G D + E  G T  +   L+S   G G AV  G
Sbjct: 164 FGATALAEP----EVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 82.2 bits (204), Expect = 1e-17
 Identities = 72/274 (26%), Positives = 109/274 (39%), Gaps = 54/274 (19%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIFGHEASGIVESVGP 80
           L + E  V  P P E+ ++V   SL   D+      +      P I   + +G V +VG 
Sbjct: 15  LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGE 74

Query: 81  GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVY 140
           GVT F  G+ V+  F            D+++    LG    GV+                
Sbjct: 75  GVTRFKVGDRVVPTFFPNWLDGPPTAEDEASA---LGGPIDGVL---------------- 115

Query: 141 HYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN----VADISKGST 196
                   +EY V+     V+       E+   L C   AGL  AWN    +  +  G T
Sbjct: 116 --------AEYVVLPEEGLVRAPDHLSFEEAATLPC---AGL-TAWNALFGLGPLKPGDT 163

Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI 256
           V++ G G V L   Q AKA GA R+I   ++ EK E+AKA G    +N     +  ++V 
Sbjct: 164 VLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPDWGEEV- 221

Query: 257 KRITDG-GADY------------SFECIGDTGMI 277
            ++T G G D+            S + +   G+I
Sbjct: 222 LKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVI 255

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 75/268 (27%), Positives = 109/268 (40%), Gaps = 53/268 (19%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF----PRIFGH 69
           KAAV        VV E  + P +  E  +K+    +C +D+        F     RI GH
Sbjct: 2   KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHV--ANGDFGDKTGRILGH 59

Query: 70  EASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
           E  GIV+ VGPGVT    G+ V +  F   C  C  C + +   C       R V ++  
Sbjct: 60  EGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLC-------RSVKNAG- 111

Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV---------SSIAPLEKICLLSCGLS 179
              +++ G            +E  +V +  AVKV         SSI         +C   
Sbjct: 112 ---YTVDG----------GMAEQCIVTADYAVKVPEGLDPAQASSI---------TC--- 146

Query: 180 AGLGA--AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
           AG+    A  V+ I  G  + I+G G +G    Q AK    +++I VD N +K   AK  
Sbjct: 147 AGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEV 206

Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGAD 265
           G    +N     E V ++I+    GGA 
Sbjct: 207 GADLTINSKR-VEDVAKIIQ-EKTGGAH 232

Length = 338

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 80.9 bits (200), Expect = 4e-17
 Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 37/242 (15%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPG 81
           L +EE  +  P   E+R+KV    +C SD   +      A +PR+ GHE  G++++VG G
Sbjct: 12  LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 71

Query: 82  VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTRFSIKGKP 138
           V     GE V    +  C  C  C   K N C    VLG+ R G                
Sbjct: 72  VDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDG---------------- 115

Query: 139 VYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV 197
                    FSEY VV +  A ++  +IA    + +    ++A +         ++    
Sbjct: 116 --------GFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRTGP---TEQDVA 164

Query: 198 VIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI 256
           +I+G G VGL++ Q  K       +I  D   E+   AK  G    +  N+  EP+ + +
Sbjct: 165 LIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVI--NNAQEPLGEAL 222

Query: 257 KR 258
           + 
Sbjct: 223 EE 224

Length = 339

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 79.4 bits (196), Expect = 1e-16
 Identities = 74/276 (26%), Positives = 117/276 (42%), Gaps = 32/276 (11%)

Query: 18  AWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF------PRIFGHE 70
           AW  G   L ++  ++ P  P ++R+++    +C SD+   +T          P + GHE
Sbjct: 21  AWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE 80

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
            +GI+E VG  V     G+ V       C  C  CK  + N C                 
Sbjct: 81  CAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCP---------------- 124

Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD 190
                  P  H     S +   V  +    K+     LE+  +    LS G+ A    A+
Sbjct: 125 EMKFFATPPVH----GSLANQVVHPADLCFKLPENVSLEEGAMCE-PLSVGVHAC-RRAN 178

Query: 191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
           I   + V++ G G +GL     A+A GA RI+ VD + E+   AK  G  E +  + N E
Sbjct: 179 IGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIE 238

Query: 251 PVQQVIKRITD---GGADYSFECIGDTGMITTALQS 283
            V+  ++ I     GG D SF+C+G    ++TAL++
Sbjct: 239 DVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEA 274

Length = 364

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 77.6 bits (192), Expect = 5e-16
 Identities = 62/257 (24%), Positives = 95/257 (36%), Gaps = 58/257 (22%)

Query: 25  LVVEEVEVNPPQPEEIRIKVV------CTSLCRSDITAWETQAIFPRIFGHEASGIVESV 78
           L +EE+ V  P   E+ I+V         ++ R            P   G+EA+G+VE+V
Sbjct: 15  LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIE--PPPLPARLGYEAAGVVEAV 72

Query: 79  GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKP 138
           G GVT F  G+ V  +                                  Q         
Sbjct: 73  GAGVTGFAVGDRVSVI----------------------------PAADLGQ--------- 95

Query: 139 VYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV 197
            Y   A     EY +V +   VK+   ++ +E   L    L+A        A +  G +V
Sbjct: 96  -YGTYA-----EYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVEL-AGLRPGDSV 148

Query: 198 VIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI 256
           +I     +VGL+  Q A A GA  +I      EK +   A G    +  ++  E +   +
Sbjct: 149 LITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE--EDLVAEV 205

Query: 257 KRITDG-GADYSFECIG 272
            RIT G G D  F+ +G
Sbjct: 206 LRITGGKGVDVVFDPVG 222

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 74.2 bits (183), Expect = 7e-15
 Identities = 71/266 (26%), Positives = 106/266 (39%), Gaps = 61/266 (22%)

Query: 18  AW-----GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAI-FPRIFGH 69
           AW     GA   L +EE+E+  P   E+ +KV    L   D  + AW   A  +P + G 
Sbjct: 3   AWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGV 62

Query: 70  EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
           + +G+V +VG  VT +  G+                               R   H+   
Sbjct: 63  DGAGVVVAVGAKVTGWKVGD-------------------------------RVAYHAS-- 89

Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNV 188
              +  G          SF+EYTVV +   + +  S++  E   L   GL+A   A +  
Sbjct: 90  --LARGG----------SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTA-YQALFKK 136

Query: 189 ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
             I  G T++I G  G VG    Q AK  G  R+I    +    E  K+ G    ++ ND
Sbjct: 137 LRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGADHVIDYND 194

Query: 248 NNEPVQQVIKRITDG-GADYSFECIG 272
            +  V + IK IT G G D   + +G
Sbjct: 195 ED--VCERIKEITGGRGVDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 73.3 bits (181), Expect = 1e-14
 Identities = 70/275 (25%), Positives = 107/275 (38%), Gaps = 75/275 (27%)

Query: 14  KAAV--AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI--TAWETQAIFPRIF-- 67
           KA V    G  + LV+EEV   P  P E+RI+V    +   D+     + Q   P  F  
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVP 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           G E +G+VE+VG GVT F  G+ V+                         L  +G     
Sbjct: 62  GSEVAGVVEAVGEGVTGFKVGDRVV------------------------ALTGQG----- 92

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
                               F+E  VV +     +      E+        +A L   + 
Sbjct: 93  -------------------GFAEEVVVPAAAVFPLPDGLSFEE--------AAALPVTYG 125

Query: 188 V--------ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
                    A +  G TV++ G  G VGL+  Q AKA GA R+I   ++ EK   A+A G
Sbjct: 126 TAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALG 184

Query: 239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
               ++  D    +++ +K +T G G D  ++ +G
Sbjct: 185 ADHVIDYRD--PDLRERVKALTGGRGVDVVYDPVG 217

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 73.0 bits (180), Expect = 2e-14
 Identities = 75/308 (24%), Positives = 106/308 (34%), Gaps = 74/308 (24%)

Query: 14  KAAVAWGA-GQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAIFPRIFGHE 70
           KAAV  G  G  LVV +V V  P P+E+ +KV   +L   D     +     +P I G +
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCD 61

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
            +G V  VG GVT F  G+ V                       V G       +     
Sbjct: 62  FAGTVVEVGSGVTRFKVGDRVAGF--------------------VHGGNPNDPRN----- 96

Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA---------G 181
                           +F EY V  +    K+      E+   L  GL           G
Sbjct: 97  ---------------GAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLG 141

Query: 182 LGAAW-NVADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKC-----EKA 234
           L       +  SKG  V+I+G  + VG    Q AK  G  ++I              +  
Sbjct: 142 LPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITT------ASPKNFDLV 194

Query: 235 KAFGVTEFLNPNDNNEP-VQQVIKRITDGGADYSFECIGDTG---MITTALQSCCDGWGL 290
           K+ G        D ++P V + I+  T G   Y+ +CI       +   AL     G  L
Sbjct: 195 KSLGADAVF---DYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGG-KL 250

Query: 291 AVTLGVPK 298
              L VP+
Sbjct: 251 VSLLPVPE 258

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 71.6 bits (176), Expect = 5e-14
 Identities = 70/260 (26%), Positives = 99/260 (38%), Gaps = 53/260 (20%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSD---ITAWETQAIFPRIFGHEASGIVESVGPG 81
           L VE+V+   P P E+ I+V    +   D   I A + + + P I G E +G+VE VG  
Sbjct: 14  LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPGAEFAGVVEEVGDH 72

Query: 82  VTEFNEGEHVLT---VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKP 138
           V    +G+ V+    VF G   TC  C S     C   G                +    
Sbjct: 73  VKGVKKGDRVVVYNRVFDG---TCDMCLSGNEMLCRNGG-------------IIGVVSNG 116

Query: 139 VYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-----AWNVADISK 193
            Y        +EY VV      K+      E         S  + A     A   A +  
Sbjct: 117 GY--------AEYIVVPEKNLFKIPDSISDE------LAASLPVAALTAYHALKTAGLGP 162

Query: 194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 252
           G TVV+FG  G  G+   Q AK  GA  +I V       +  K FG  E ++     + V
Sbjct: 163 GETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSRK----DWLKEFGADEVVDY----DEV 213

Query: 253 QQVIKRITDGGADYSFECIG 272
           ++ +K IT   AD     +G
Sbjct: 214 EEKVKEIT-KMADVVINSLG 232

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 68.3 bits (167), Expect = 9e-13
 Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 15/236 (6%)

Query: 42  IKVVCTSLCRSD--ITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99
           +KVV T++C SD  +    T A    + GHE +G V   G  V     G+ V   F   C
Sbjct: 38  LKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIAC 97

Query: 100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA 159
             CR CK   +  C  +   R G  +        + G+  Y     + F+         A
Sbjct: 98  GRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA 157

Query: 160 VKVSSIAPLEKI---CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKAR 216
                   LEKI    +LS     G   A   A +  GSTV I G G VGL+ A  A+  
Sbjct: 158 --------LEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLL 208

Query: 217 GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272
           GA+ +I  D NP +  +A++FG  E ++ + +    +Q+ + + +   D + +C+G
Sbjct: 209 GAAVVIVGDLNPARLAQARSFGC-ETVDLSKDATLPEQIEQILGEPEVDCAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 67.1 bits (165), Expect = 2e-12
 Identities = 72/282 (25%), Positives = 103/282 (36%), Gaps = 89/282 (31%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQP--EEIRIKVVCTSLCRSDITAWETQAIFP------R 65
           KA V    G P V+E  EV  P P   E+ I+V    + R+D+     Q ++P       
Sbjct: 2   KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQR--QGLYPPPPGASD 59

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I G E +G+V +VGPGVT +  G+                         V  L       
Sbjct: 60  ILGLEVAGVVVAVGPGVTGWKVGD------------------------RVCAL------- 88

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS----AG 181
                             A   ++EY VV +G  + V              GLS    A 
Sbjct: 89  -----------------LAGGGYAEYVVVPAGQLLPVPE------------GLSLVEAAA 119

Query: 182 LGAAW--------NVADISKGSTVVIFGLGT--VGLSVAQGAKARGASRIIGVDTNPEKC 231
           L   +         +  +  G TV+I G G   VG +  Q AKA GA R+I    + EK 
Sbjct: 120 LPEVFFTAWQNLFQLGGLKAGETVLIHG-GASGVGTAAIQLAKALGA-RVIATAGSEEKL 177

Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
           E  +A G    +N    +    + +K  T G G D   + +G
Sbjct: 178 EACRALGADVAINYRTED--FAEEVKEATGGRGVDVILDMVG 217

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 61/240 (25%), Positives = 84/240 (35%), Gaps = 60/240 (25%)

Query: 16  AVAWGAGQPLVVEEVEVNPPQPE----EIRIKVVCTSLCRSDI------TAWETQAIFPR 65
            V    G P V+  +EV  P P     E+ +KV   S+   D               FP 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I G + +G V +VG GVT F  G+ V                        L  +  G   
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVFG---------------------RLPPKGGG--- 96

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
                                + +EY V   SG A K   ++  E   L   GL+A L A
Sbjct: 97  ---------------------ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTA-LQA 134

Query: 185 AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
             +   +  G  V+I G  G VG    Q AKA GA  + GV  +    E  ++ G  E +
Sbjct: 135 LRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVC-STRNAELVRSLGADEVI 192

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 65.4 bits (160), Expect = 6e-12
 Identities = 58/273 (21%), Positives = 95/273 (34%), Gaps = 65/273 (23%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR----I 66
           +T K    +G    L + E     P+  ++ IKV    + R+D    + +   P     I
Sbjct: 5   VTLKG---FGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEI 61

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            G E +G VE VG  V  F EG+ V+ +  G                             
Sbjct: 62  LGLEVAGYVEDVGSDVKRFKEGDRVMALLPG----------------------------- 92

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
                                ++EY V H G  + +      E+    +  +      AW
Sbjct: 93  -------------------GGYAEYAVAHKGHVMHIPQGYTFEE----AAAIPEAFLTAW 129

Query: 187 N----VADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
                  D+ KG +V+I  G   VG + AQ A+  GA+ II   ++ EK +  K      
Sbjct: 130 QLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITT-SSEEKVDFCKKLAAII 188

Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274
            +   D      +V K   + G +   +C+G +
Sbjct: 189 LIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGS 221

Length = 334

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 66/269 (24%), Positives = 93/269 (34%), Gaps = 67/269 (24%)

Query: 14  KAAVAWGAGQPLVVEEVEVNP---PQPEEIRIKVVCTSLCRSDI---------------- 54
           +A +  G G    +   +  P   P P E+ I+V    +  +DI                
Sbjct: 2   RAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATD 61

Query: 55  -------TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTC-RQCK 106
                    W     FPRI G +  G V +VG GV     GE VL           R   
Sbjct: 62  STGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVL------VDPSIRDPP 115

Query: 107 SDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 166
            D     + +G ER G                         F+EYTVV +  A  V+S  
Sbjct: 116 EDDPADIDYIGSERDG------------------------GFAEYTVVPAENAYPVNSPL 151

Query: 167 PLEKICLLSCGLSAGLGAAWNV---ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRII 222
              ++    C  S     A N+   A +  G TV++ G  G VG ++ Q AK RGA  +I
Sbjct: 152 SDVELATFPCSYS----TAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVI 206

Query: 223 GVDTNPEKCEKAKAFGVTEFLNPNDNNEP 251
            V     K E  +A G    +  +     
Sbjct: 207 AV-AGAAKEEAVRALGADTVILRDAPLLA 234

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 63.4 bits (155), Expect = 3e-11
 Identities = 65/284 (22%), Positives = 99/284 (34%), Gaps = 70/284 (24%)

Query: 16  AVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIV 75
           A+    G  L VE++    P P E  ++V+   +C +D+  ++    FP + GHE  GIV
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFPGVPGHEFVGIV 62

Query: 76  ESVGPG-------VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
           E            V E N            C  C  C+          GL      H   
Sbjct: 63  EEGPEAELVGKRVVGEINIA----------CGRCEYCRR---------GLYT----HCPN 99

Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAG------- 181
           +T   I  +         +F+EY               PLE + ++   +          
Sbjct: 100 RTVLGIVDRD-------GAFAEYLT------------LPLENLHVVPDLVPDEQAVFAEP 140

Query: 182 LGAAWNVAD---ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
           L AA  + +   I+ G  V + G G +GL +AQ     G   ++ V  + EK   A+  G
Sbjct: 141 LAAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLG 199

Query: 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQ 282
           V   L     +E           GG D   E  G    +  AL+
Sbjct: 200 VETVLPDEAESE----------GGGFDVVVEATGSPSGLELALR 233

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 62.9 bits (153), Expect = 6e-11
 Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 20/219 (9%)

Query: 37  PEEIRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-L 92
           PE++ IKV+   +C +D+   +     + +P + GHE  G V  VG  V++F  G+ V +
Sbjct: 34  PEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGV 93

Query: 93  TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYT 152
            V +G C  C  CKSD    C      +R   ++D  T     GKP         F+   
Sbjct: 94  GVIVGCCGECSPCKSDLEQYC-----NKRIWSYNDVYT----DGKPTQ-----GGFASAM 139

Query: 153 VVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQ 211
           VV     VK+   +AP +   LL  G++       +      G    I GLG VG    +
Sbjct: 140 VVDQKFVVKIPEGMAPEQAAPLLCAGVTV-YSPLSHFGLKQSGLRGGILGLGGVGHMGVK 198

Query: 212 GAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
            AKA G    +   ++ ++ E  +  G  ++L  +D  E
Sbjct: 199 IAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAE 237

Length = 357

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 62.6 bits (152), Expect = 7e-11
 Identities = 76/328 (23%), Positives = 125/328 (38%), Gaps = 31/328 (9%)

Query: 6   KQPQVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-- 60
           K P+    + A  W A  P   L            E++ +K++   +C SD+   + +  
Sbjct: 3   KSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG 62

Query: 61  -AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGL 118
              +P + GHE  GIV  +G  V +F EG+ V + V +G CK+C  C  D  N C  +  
Sbjct: 63  FTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIF 122

Query: 119 ERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGL 178
               + H   +                  +S+  VV     ++     PL+    L C  
Sbjct: 123 TYNSIGHDGTKN--------------YGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAG 168

Query: 179 SAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF 237
                          G  + + GLG +G    +  KA G  ++  + ++  K ++A    
Sbjct: 169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRL 227

Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
           G   FL   D  E ++  I     G  DY  + +     +   L       G  +TLG+P
Sbjct: 228 GADSFLVSTD-PEKMKAAI-----GTMDYIIDTVSAVHALGPLL-GLLKVNGKLITLGLP 280

Query: 298 KLKPEVAAHYGLFLSGRTLKGSLFGGWK 325
           + KP     + L L  + + GS  GG K
Sbjct: 281 E-KPLELPIFPLVLGRKLVGGSDIGGIK 307

Length = 360

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 4e-10
 Identities = 67/290 (23%), Positives = 112/290 (38%), Gaps = 43/290 (14%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFP 64
           +  ++ V  G  + + V E E+         +++    +C SD+  ++           P
Sbjct: 3   VKTQSCVVAGK-KDVAVTEQEIEW-NNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAP 60

Query: 65  RIFGHEASG-IVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
            + GHE  G IV S   G+    EG+ V       C  C+ C S   N C          
Sbjct: 61  MVLGHEVIGKIVHSDSSGL---KEGQTVAINPSKPCGHCKYCLSHNENQCT--------- 108

Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
                  RF   G  +Y       F+ Y VV +   +     A  EK+   +  L+  + 
Sbjct: 109 -----TMRFF--GSAMYFPHVDGGFTRYKVVDTAQCIPYPEKAD-EKVMAFAEPLAVAIH 160

Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
           AA    D+ +G  V + G+G +G  +    K  GA+ I+  D +P     A+  G  + +
Sbjct: 161 AAHQAGDL-QGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219

Query: 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVT 293
           NP +++    +  K    G  D SFE  G      +++ +C     L VT
Sbjct: 220 NPQNDDLDHYKAEK----GYFDVSFEVSGH----PSSINTC-----LEVT 256

Length = 343

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 59.5 bits (145), Expect = 6e-10
 Identities = 71/273 (26%), Positives = 102/273 (37%), Gaps = 68/273 (24%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDI-----TAWETQAIFPRI 66
           KA V    G P V E  EV  PQP   ++ ++V  + +   D       A       P I
Sbjct: 2   KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPP-LPAI 60

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            G + +G+VE+VG GVT F  G+                        EV G         
Sbjct: 61  LGCDVAGVVEAVGEGVTRFRVGD------------------------EVYGCAG------ 90

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGLGAA 185
                  + G          S +EY VV +   A+K ++++  E   L           A
Sbjct: 91  ------GLGGLQ-------GSLAEYAVVDARLLALKPANLSMREAAAL-----PLVGITA 132

Query: 186 WNV----ADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
           W      A +  G TV+I  G G VG    Q AKA GA R+    ++ EK   A++ G  
Sbjct: 133 WEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGAD 190

Query: 241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
             +      E V + +   T G G D  F+ +G
Sbjct: 191 PIIYY---RETVVEYVAEHTGGRGFDVVFDTVG 220

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 58.8 bits (143), Expect = 8e-10
 Identities = 68/251 (27%), Positives = 99/251 (39%), Gaps = 59/251 (23%)

Query: 27  VEEVEVNPPQPEEIRIKVVCTSLCRSDI--TA--WETQAIFPRIFGHEASGIVESVGPGV 82
           + +V V  P P E+ +K     +  SDI  TA  ++     P   G E  G V +VG GV
Sbjct: 20  IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGV 79

Query: 83  TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHY 142
           T+F  G+ V T+  G                                             
Sbjct: 80  TDFKVGDAVATMSFG--------------------------------------------- 94

Query: 143 CAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTV-VIFG 201
               +F+EY VV +  AV V  + P E + LL  GL+A + A   V ++  G TV V   
Sbjct: 95  ----AFAEYQVVPARHAVPVPELKP-EVLPLLVSGLTASI-ALEEVGEMKSGETVLVTAA 148

Query: 202 LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 261
            G  G    Q AK  G   +IG  ++ EK E  K+ G    +N     E + +V+K+   
Sbjct: 149 AGGTGQFAVQLAKLAG-CHVIGTCSSDEKAEFLKSLGCDRPINY--KTEDLGEVLKKEYP 205

Query: 262 GGADYSFECIG 272
            G D  +E +G
Sbjct: 206 KGVDVVYESVG 216

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 63/241 (26%), Positives = 94/241 (39%), Gaps = 56/241 (23%)

Query: 31  EVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGPGVTEFN 86
           EV PP P E+RI+V   SL   D+      + T   +P   G EASG+V +VGP VT   
Sbjct: 1   EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60

Query: 87  EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS 146
            G+ V+    GE                               T  ++    V    A  
Sbjct: 61  VGDEVI-AGTGE-------------------------SMGGHATLVTVPEDQVVRKPASL 94

Query: 147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVI-FGLGTV 205
           SF E       CA+ V  +  ++               A+  A ++KG  ++I    G  
Sbjct: 95  SFEE------ACALPVVFLTVID---------------AFARAGLAKGEHILIQTATGGT 133

Query: 206 GLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GA 264
           GL   Q A+ +GA  I    ++ +K E  K  GV   +N  + +   ++ I R+T G G 
Sbjct: 134 GLMAVQLARLKGAE-IYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGV 190

Query: 265 D 265
           D
Sbjct: 191 D 191

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 56.8 bits (138), Expect = 4e-09
 Identities = 60/237 (25%), Positives = 90/237 (37%), Gaps = 53/237 (22%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIFG 68
           KA V    G P  L + E+ +  P+P  + I+V    L RS+I   +       FPR+ G
Sbjct: 2   KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61

Query: 69  HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
            EA G VE   PG   F  G+ V T  +G                  +G    G      
Sbjct: 62  IEAVGEVEE-APG-GTFTPGQRVAT-AMGG-----------------MGRTFDG------ 95

Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
                             S++EYT+V +     + S     ++  L        G+ +  
Sbjct: 96  ------------------SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRS 137

Query: 189 ADISKGSTVVIFGLGT--VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
             +  G T++I G GT  VGL+  + AKA GA  +     +PE+    K  G  E +
Sbjct: 138 LGLQPGDTLLIRG-GTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVV 192

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 56.6 bits (136), Expect = 5e-09
 Identities = 73/305 (23%), Positives = 120/305 (39%), Gaps = 43/305 (14%)

Query: 39  EIRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTV 94
           ++ +K++   +C SD+   +     + +P I GHE  GI   VG  VT+F EG+ V + V
Sbjct: 33  DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92

Query: 95  FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS------- 147
            IG C++C  C  D  N C                       K V+ Y + SS       
Sbjct: 93  IIGSCQSCESCNQDLENYCP----------------------KVVFTYNSRSSDGTRNQG 130

Query: 148 -FSEYTVVHSGCAVKVSSIAPLEKICLLSC-GLSAGLGAAWNVADISKGSTVVIFGLGTV 205
            +S+  VV     + +    P +    L C G++      +       G  + + GLG +
Sbjct: 131 GYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGL 190

Query: 206 GLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD 265
           G    +  KA G    +   ++ ++ E     G   FL   D+     Q +K    G  D
Sbjct: 191 GHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS-----QKMKEAV-GTMD 244

Query: 266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325
           +  + +     +   L S     G  V LG+P+ KP     + L L  + + GS  GG K
Sbjct: 245 FIIDTVSAEHAL-LPLFSLLKVSGKLVALGLPE-KPLDLPIFPLVLGRKMVGGSQIGGMK 302

Query: 326 PKTDL 330
              ++
Sbjct: 303 ETQEM 307

Length = 375

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 53.8 bits (130), Expect = 5e-08
 Identities = 79/331 (23%), Positives = 122/331 (36%), Gaps = 62/331 (18%)

Query: 16  AVAWGAGQP-LVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAIFPR-----IF 67
           A+A   G+P + V ++    P P E+ ++ +   +C +D  I A E     P      + 
Sbjct: 3   AIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEY-GTAPPGEDFLVL 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           GHEA G+VE VG G +  + G+ V+         C  C+  + + CE           + 
Sbjct: 62  GHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCE-----------TG 109

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
           + T   IKG   +         EY V      VKV     L  + +L   LS  +  A  
Sbjct: 110 EYTERGIKGLHGF-------MREYFVDDPEYLVKVP--PSLADVGVLLEPLSV-VEKAIE 159

Query: 188 VAD-ISK------GSTVVIFGLGTVGLSVAQGAKARG-----ASRIIGVDTNPEKCEKAK 235
            A+ + K          ++ G G +GL  A   + RG      +R    D    K +  +
Sbjct: 160 QAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNR---RDPPDPKADIVE 216

Query: 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQ--SCCDGWGLAVT 293
             G T     N +  PV +V      G  D   E    TG+   A +        G+ + 
Sbjct: 217 ELGATYV---NSSKTPVAEVKL---VGEFDLIIEA---TGVPPLAFEALPALAPNGVVIL 267

Query: 294 LGVPKLKPEV-----AAHYGLFLSGRTLKGS 319
            GVP    E        +  L L  + L GS
Sbjct: 268 FGVPGGGREFEVDGGELNRDLVLGNKALVGS 298

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 52.6 bits (127), Expect = 1e-07
 Identities = 56/270 (20%), Positives = 89/270 (32%), Gaps = 77/270 (28%)

Query: 14  KAAV--AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIF 67
           +A     +GA   L + ++ V  P P E+ ++V  + +   D      A+      P + 
Sbjct: 2   RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVP 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           G + +G+VE+VG GV     G+ V                          L         
Sbjct: 62  GSDGAGVVEAVGEGVDGLKVGDRVWLT----------------------NLGWGRRQ--- 96

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
                              + +EY VV            P +++  L  G+S   GAA  
Sbjct: 97  ------------------GTAAEYVVV------------PADQLVPLPDGVSFEQGAALG 126

Query: 188 V------------ADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234
           +            A    G TV++ G  G VG +  Q A+  GA R+I   ++ E  E  
Sbjct: 127 IPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELV 185

Query: 235 KAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264
           +  G     N     E +   I   T G  
Sbjct: 186 RQAGADAVFNYRA--EDLADRILAATAGQG 213

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 50.2 bits (121), Expect = 7e-07
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 17/88 (19%)

Query: 18 AWGAGQPLVVE--------EVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIF 63
          A G  QPL +         E+    P   ++ ++V   S+       R+       Q   
Sbjct: 3  AIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQ--- 59

Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHV 91
          P+I G +ASG+VE+VG  VT F  G+ V
Sbjct: 60 PKILGWDASGVVEAVGSEVTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 49.6 bits (119), Expect = 9e-07
 Identities = 55/259 (21%), Positives = 90/259 (34%), Gaps = 64/259 (24%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGP 80
           L V E ++  P   E+ +KV  + +  +D+      +  Q   P   G++  G V+++G 
Sbjct: 15  LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGS 74

Query: 81  GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVY 140
           GVT F  G+                         V  L R G                  
Sbjct: 75  GVTGFEVGD------------------------RVAALTRVG------------------ 92

Query: 141 HYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVI 199
                   +EY  + +   V V   +   E +CL+   ++A        A +  G  V+I
Sbjct: 93  ------GNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTA-YQMLHRAAKVLTGQRVLI 145

Query: 200 FGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIK 257
            G  G VG ++ + A   GA  + G  T  E+   A +  G T       +  P      
Sbjct: 146 HGASGGVGQALLELALLAGA-EVYG--TASERNHAALRELGATPIDYRTKDWLPA----- 197

Query: 258 RITDGGADYSFECIGDTGM 276
            +T GG D  F+ +G    
Sbjct: 198 MLTPGGVDVVFDGVGGESY 216

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 68/282 (24%), Positives = 98/282 (34%), Gaps = 89/282 (31%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWETQAIFP------R 65
           KA      G P V+  VEV  P P+  E+ I+V    + R D+   +    +P       
Sbjct: 2   KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLL--QRAGKYPPPPGASD 59

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I G E +G V +VG GV+ +  G+                         V  L       
Sbjct: 60  ILGLEVAGEVVAVGEGVSRWKVGD------------------------RVCAL------- 88

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
                             A   ++EY  V +G  + V              GLS    AA
Sbjct: 89  -----------------VAGGGYAEYVAVPAGQVLPVPE------------GLSLVEAAA 119

Query: 186 --------W-NVADI---SKGSTVVIFGLGTVGLSVA--QGAKARGASRIIGVDTNPEKC 231
                   W N+        G TV+I G G  G+     Q AKA GA R+     + EKC
Sbjct: 120 LPETFFTVWSNLFQRGGLKAGETVLIHG-GASGIGTTAIQLAKAFGA-RVFTTAGSDEKC 177

Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
              +A G    +N  + +    +V+K  T G G D   + +G
Sbjct: 178 AACEALGADIAINYREEDFV--EVVKAETGGKGVDVILDIVG 217

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 49.0 bits (117), Expect = 2e-06
 Identities = 50/190 (26%), Positives = 75/190 (39%), Gaps = 30/190 (15%)

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVL---TVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
           I G +ASG+V  VGPGVT +  G+ V+             R      S+   + G E   
Sbjct: 80  IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRDGDPMLSSEQRIWGYE--- 136

Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSA- 180
                  T F              SF+E+ +V       K   +   E  C    G +A 
Sbjct: 137 -------TNFG-------------SFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAY 176

Query: 181 GLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
                WN A +  G  V+I+G  G +G    Q A+A G + +  V ++PEK E  ++ G 
Sbjct: 177 RQLVGWNPAAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPV-AVVSSPEKAEYCRSLGA 235

Query: 240 TEFLNPNDNN 249
              ++ ND  
Sbjct: 236 EAVIDRNDFG 245

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 47.9 bits (115), Expect = 3e-06
 Identities = 40/194 (20%), Positives = 60/194 (30%), Gaps = 75/194 (38%)

Query: 39  EIRIKVVCTSLCRSDI-TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97
           E+ ++V    L   D+  A           G E SGIV  VG GVT    G+ V+ +  G
Sbjct: 2   EVEVEVKAAGLNFRDVLVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAPG 61

Query: 98  ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157
                                                            +F+ +  V + 
Sbjct: 62  -------------------------------------------------AFATHVRVDAR 72

Query: 158 CAVKVSSIAPLEKICLLSCGLS----AGLGAAW--------NVADISKGSTVVIF-GLGT 204
             VK+               LS    A L  A+        ++A + KG +V+I    G 
Sbjct: 73  LVVKIPD------------SLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGG 120

Query: 205 VGLSVAQGAKARGA 218
           VG +  Q A+  GA
Sbjct: 121 VGQAAIQLAQHLGA 134

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 48/199 (24%), Positives = 75/199 (37%), Gaps = 26/199 (13%)

Query: 24  PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGP 80
           PL   E  V  P P E+ ++V    +CR+D+   E      R     GHE  G V   G 
Sbjct: 14  PLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGA 73

Query: 81  GVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPV 139
               F  G+ V   ++   C  CR C+    N C                +R++      
Sbjct: 74  DAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCP--------------ASRYT------ 113

Query: 140 YHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVI 199
             +     ++EYT V +  A ++ +     ++  L C    G  A    A +  G  + +
Sbjct: 114 -GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGL 171

Query: 200 FGLGTVGLSVAQGAKARGA 218
           +G G      AQ A A+GA
Sbjct: 172 YGFGGSAHLTAQVALAQGA 190

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 16/87 (18%)

Query: 20 GAGQPLVVEEVEV--NPPQPEEIRIKVVCTSLCRSDITAWETQAI---------FPRIFG 68
          G   PLV+E V +   PP P E+ ++++   +  SD+       I          P + G
Sbjct: 7  GEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLIT-----ISGAYGSRPPLPAVPG 61

Query: 69 HEASGIVESVGPGVTEFNEGEHVLTVF 95
          +E  G+V  VG GV+    G+ VL + 
Sbjct: 62 NEGVGVVVEVGSGVSGLLVGQRVLPLG 88

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|237820 PRK14806, PRK14806, bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 197 VVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
           VV+ GLG +G S A+  + RG A  ++ VD   +  E A + GV
Sbjct: 6   VVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGV 49

Length = 735

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 7/85 (8%)

Query: 14 KAAVAWGAGQPL-VVEEVEVNPPQPE--EIRIKVVCTSLCRSDI----TAWETQAIFPRI 66
          +AAV    G P  V+E  EV  P P   E+ ++   + +   D+      +  +   P I
Sbjct: 2  RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAI 61

Query: 67 FGHEASGIVESVGPGVTEFNEGEHV 91
           G EA G+V++VG GV     G+ V
Sbjct: 62 GGSEAVGVVDAVGEGVKGLQVGQRV 86

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|216949 pfam02254, TrkA_N, TrkA-N domain

 Score = 42.9 bits (102), Expect = 2e-05
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
           ++I G G VG S+A+  +  G   ++ +D +PE+ E+ +  GV 
Sbjct: 1   IIIIGYGRVGRSLAEELREGG-PDVVVIDKDPERVEELREEGVP 43

This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD. Length = 116

>gnl|CDD|224662 COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
           +++ G G VG  VA      G   +   D + EKC +     
Sbjct: 4   ILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI 45

Length = 389

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 44.7 bits (106), Expect = 4e-05
 Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 26/186 (13%)

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I G +ASGIV +VG GV  +  G+ V+            C     N  E  G      M 
Sbjct: 84  IGGSDASGIVWAVGEGVKNWKVGDEVVV----------HCSVWDGNDPERAG---GDPMF 130

Query: 126 SDQQTRFSIKGKPVYHY-CAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSA-GL 182
              Q         ++ Y     SF+++ +V +     K   ++  E    +  G +A  +
Sbjct: 131 DPSQR--------IWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRM 182

Query: 183 GAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
              WN   +  G  V+I+G  G +G    Q A+A GA   + V ++ EK E  +A G   
Sbjct: 183 LFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEG 241

Query: 242 FLNPND 247
            +N  D
Sbjct: 242 VINRRD 247

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only]

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 11/135 (8%)

Query: 144 AVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNVADISK---GSTVVI 199
            VS + EY +       K+  S APL    L   G+  GL A + + DI +   G TVV+
Sbjct: 99  GVSGWQEYAISDGEGLRKLDPSPAPLSAY-LGVLGMP-GLTAYFGLLDIGQPKAGETVVV 156

Query: 200 FGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFLNPNDNNEPVQQVIK 257
               G VG  V Q AK +G  R++G+    EKC+      G    ++    +    Q +K
Sbjct: 157 SAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQALK 213

Query: 258 RITDGGADYSFECIG 272
                G D  FE +G
Sbjct: 214 EACPKGIDVYFENVG 228

Length = 340

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 44.1 bits (105), Expect = 6e-05
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIF 67
          +A V  G G    L VE+  +  P   E+R++V    L  +D+ A    +++    P + 
Sbjct: 1  RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVP 60

Query: 68 GHEASGIVESVGPGVTEFNEGEHVLTV 94
          G E +G VE+VG GV +F  G+ V+ +
Sbjct: 61 GFECAGTVEAVGEGVKDFKVGDRVMGL 87

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 43.8 bits (104), Expect = 7e-05
 Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 9/100 (9%)

Query: 182 LGAAWNVAD-----ISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
           LG A+ + +     +   S V++ G  T VG    Q AK       +    +    E  K
Sbjct: 135 LGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNK 194

Query: 236 AFGVTEFLN--PNDNNEPVQQVIKRITDGGA-DYSFECIG 272
             G   F++   +   + ++ V++ +   G  D   +C+G
Sbjct: 195 KLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVG 234

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases

 Score = 43.6 bits (104), Expect = 8e-05
 Identities = 38/143 (26%), Positives = 54/143 (37%), Gaps = 23/143 (16%)

Query: 143 CAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-------AW----NVADI 191
                + EY VV        S +  L+    L   LSA LG        A+     +   
Sbjct: 91  SGFLGWQEYAVVDGA-----SGLRKLDPSLGLP--LSAYLGVLGMTGLTAYFGLTEIGKP 143

Query: 192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNN 249
             G TVV+    G VG  V Q AK  GA R++G+  + EKC       G    +N     
Sbjct: 144 KPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT-- 200

Query: 250 EPVQQVIKRITDGGADYSFECIG 272
             + + +K     G D  F+ +G
Sbjct: 201 PDLAEALKEAAPDGIDVYFDNVG 223

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|223364 COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism]

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 20/59 (33%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253
            V I GLG +G S+A+  K  G   RIIG D +    + A   GV + L      E   
Sbjct: 5   KVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAA 63

Length = 279

>gnl|CDD|234950 PRK01390, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

 Score = 41.4 bits (98), Expect = 5e-04
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)

Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
            G TV +FGLG  GL+ A+   A GA  +I  D NP    KA A G+T
Sbjct: 8   AGKTVAVFGLGGSGLATARALVAGGA-EVIAWDDNPASRAKAAAAGIT 54

Length = 460

>gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase

 Score = 41.0 bits (97), Expect = 5e-04
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
            G TV+I GLG +G  +A+ AKA G  R+IGV  +     
Sbjct: 133 AGKTVLIVGLGDIGREIARRAKAFGM-RVIGVRRSGRPAP 171

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 25 LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDI--------TAWETQAIFPRIFGHEASGIV 75
          L +E  E+ PP  P E+ +K++   +  +DI            T    P + G+E  G V
Sbjct: 16 LQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEV 75

Query: 76 ESVGPGVTEFNEGEHVL 92
            VG GV     G+ V+
Sbjct: 76 VKVGSGVKSLKPGDWVI 92

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|223643 COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

 Score = 39.6 bits (93), Expect = 0.001
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
            ++I G G VG SVA+     G + ++ +D + E+ E+  A
Sbjct: 2   KIIIIGAGRVGRSVARELSEEGHN-VVLIDRDEERVEEFLA 41

Length = 225

>gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

 Score = 38.2 bits (90), Expect = 0.002
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 3/47 (6%)

Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
           G TV I GLG +G +VA+  KA G  ++I  D  P+   +A+A G  
Sbjct: 35  GKTVGIIGLGRIGRAVARRLKAFGM-KVIAYDRYPK--AEAEALGAR 78

This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 39.3 bits (93), Expect = 0.002
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 64 PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97
            + G E +G+V  VGPGVT    G+ V+ +  G
Sbjct: 23 EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPG 56

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|181452 PRK08507, PRK08507, prephenate dehydrogenase; Validated

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 197 VVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
           + I GLG +G S+    K +G  S++ G D N    +KA   G+
Sbjct: 3   IGIIGLGLMGGSLGLALKEKGLISKVYGYDHNELHLKKALELGL 46

Length = 275

>gnl|CDD|235824 PRK06545, PRK06545, prephenate dehydrogenase; Validated

 Score = 39.1 bits (92), Expect = 0.003
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 196 TVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTE 241
           TV+I GLG +G S+A   KA G    IIG D +  +  +A  FGV +
Sbjct: 2   TVLIVGLGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARALGFGVID 48

Length = 359

>gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT 240
           +G TV + GLG VG  +A+     GA ++I  D N E   +A   FG T
Sbjct: 27  EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT 74

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 188 VADISKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
              +  G  V+       VG  + Q AK  G  + I V    E+ E+ KA G  E +  +
Sbjct: 133 YLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVI--D 189

Query: 247 DNNEPVQQVIKRITDG-GADYSFECIG--DTGMITTALQ 282
            + E + Q +K  T G GA  + + +G      +  +L+
Sbjct: 190 SSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLR 228

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|234094 TIGR03026, NDP-sugDHase, nucleotide sugar dehydrogenase

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
             + + GLG VGL +A      G   + GVD + EK +K   
Sbjct: 1   MKIAVIGLGYVGLPLAALLADLGHD-VTGVDIDQEKVDKLNK 41

Enzymes in this family catalyze the NAD-dependent alcohol-to-acid oxidation of nucleotide-linked sugars. Examples include UDP-glucose 6-dehydrogenase (1.1.1.22) , GDP-mannose 6-dehydrogenase (1.1.1.132) , UDP-N-acetylglucosamine 6-dehydrogenase (1.1.1.136), UDP-N-acetyl-D-galactosaminuronic acid dehydrogenase and UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase. These enzymes are most often involved in the biosynthesis of polysaccharides and are often found in operons devoted to that purpose. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. Length = 409

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	353
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.98
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.98
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	99.97
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.97
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.97
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.97
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.96
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.94
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.9
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.89
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.74
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.36
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.27
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.44
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.42
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.3
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.26
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.23
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.17
PLN02494	477	adenosylhomocysteinase	98.16
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.11
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.05
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.01
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.96
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.87
PRK08324	681	short chain dehydrogenase; Validated	97.85
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	97.81
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.81
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.79
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.61
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.58
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.56
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.54
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.54
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.5
PRK05993	277	short chain dehydrogenase; Provisional	97.44
PRK05693	274	short chain dehydrogenase; Provisional	97.4
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.38
PRK06182	273	short chain dehydrogenase; Validated	97.36
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.35
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.24
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.24
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.22
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.2
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.2
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.17
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.17
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.16
PRK12742	237	oxidoreductase; Provisional	97.15
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.06
PRK07326	237	short chain dehydrogenase; Provisional	96.98
PRK07109	334	short chain dehydrogenase; Provisional	96.97
PRK08265	261	short chain dehydrogenase; Provisional	96.96
PRK05872	296	short chain dehydrogenase; Provisional	96.95
PRK07806	248	short chain dehydrogenase; Provisional	96.87
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.87
PRK12828	239	short chain dehydrogenase; Provisional	96.84
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.84
PRK08177	225	short chain dehydrogenase; Provisional	96.82
TIGR00438	188	rrmJ cell division protein FtsJ.	96.82
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	96.82
PRK08017	256	oxidoreductase; Provisional	96.81
PLN03209	576	translocon at the inner envelope of chloroplast su	96.81
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.8
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	96.78
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	96.76
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.72
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.72
PRK06139	330	short chain dehydrogenase; Provisional	96.71
PRK07060	245	short chain dehydrogenase; Provisional	96.7
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	96.68
PRK08267	260	short chain dehydrogenase; Provisional	96.68
PRK12939	250	short chain dehydrogenase; Provisional	96.68
PRK06500	249	short chain dehydrogenase; Provisional	96.65
PRK06057	255	short chain dehydrogenase; Provisional	96.64
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.62
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.57
PRK06953	222	short chain dehydrogenase; Provisional	96.57
PRK08628	258	short chain dehydrogenase; Provisional	96.57
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.56
PRK07831	262	short chain dehydrogenase; Provisional	96.55
PRK06128	300	oxidoreductase; Provisional	96.55
PRK06484	520	short chain dehydrogenase; Validated	96.52
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.51
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.5
PRK07832	272	short chain dehydrogenase; Provisional	96.49
PRK04148	134	hypothetical protein; Provisional	96.48
PRK12829	264	short chain dehydrogenase; Provisional	96.48
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.48
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	96.47
PRK06949	258	short chain dehydrogenase; Provisional	96.45
PRK07814	263	short chain dehydrogenase; Provisional	96.43
PRK06841	255	short chain dehydrogenase; Provisional	96.43
PLN02780	320	ketoreductase/ oxidoreductase	96.41
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.41
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.4
PRK09186	256	flagellin modification protein A; Provisional	96.39
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.37
PRK07825	273	short chain dehydrogenase; Provisional	96.36
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.36
COG4122	219	Predicted O-methyltransferase [General function pr	96.34
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.32
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	96.32
PRK05867	253	short chain dehydrogenase; Provisional	96.31
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.3
PRK08263	275	short chain dehydrogenase; Provisional	96.29
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.29
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.28
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.28
PRK06180	277	short chain dehydrogenase; Provisional	96.28
PRK10538	248	malonic semialdehyde reductase; Provisional	96.28
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.27
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.27
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	96.26
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.25
PRK05866	293	short chain dehydrogenase; Provisional	96.25
PRK08339	263	short chain dehydrogenase; Provisional	96.24
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.22
PRK06484	520	short chain dehydrogenase; Validated	96.21
PRK06398	258	aldose dehydrogenase; Validated	96.21
PRK08618	325	ornithine cyclodeaminase; Validated	96.19
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.19
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.17
PRK09291	257	short chain dehydrogenase; Provisional	96.16
PRK06483	236	dihydromonapterin reductase; Provisional	96.15
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.14
PRK06701	290	short chain dehydrogenase; Provisional	96.13
PRK07478	254	short chain dehydrogenase; Provisional	96.12
PRK07774	250	short chain dehydrogenase; Provisional	96.12
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.11
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.11
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.11
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	96.09
PRK05876	275	short chain dehydrogenase; Provisional	96.09
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.08
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.08
PRK06179	270	short chain dehydrogenase; Provisional	96.07
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.07
PRK07904	253	short chain dehydrogenase; Provisional	96.05
PRK07024	257	short chain dehydrogenase; Provisional	96.05
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.04
PRK06196	315	oxidoreductase; Provisional	96.03
PRK09072	263	short chain dehydrogenase; Provisional	96.02
PRK07890	258	short chain dehydrogenase; Provisional	96.01
PRK08703	239	short chain dehydrogenase; Provisional	96.01
PRK07985	294	oxidoreductase; Provisional	96.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.99
PRK05884	223	short chain dehydrogenase; Provisional	95.99
CHL00194	317	ycf39 Ycf39; Provisional	95.99
PRK07454	241	short chain dehydrogenase; Provisional	95.98
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.97
PRK07576	264	short chain dehydrogenase; Provisional	95.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.96
PRK07063	260	short chain dehydrogenase; Provisional	95.96
PRK07062	265	short chain dehydrogenase; Provisional	95.96
PRK07402	196	precorrin-6B methylase; Provisional	95.96
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.96
PRK06172	253	short chain dehydrogenase; Provisional	95.96
PRK06194	287	hypothetical protein; Provisional	95.95
PRK07677	252	short chain dehydrogenase; Provisional	95.95
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	95.94
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.94
PLN00203	519	glutamyl-tRNA reductase	95.92
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.91
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.91
PRK12937	245	short chain dehydrogenase; Provisional	95.9
PRK14967	223	putative methyltransferase; Provisional	95.89
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.89
PRK06181	263	short chain dehydrogenase; Provisional	95.89
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.89
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.89
PRK06482	276	short chain dehydrogenase; Provisional	95.86
PRK05717	255	oxidoreductase; Validated	95.85
PRK05854	313	short chain dehydrogenase; Provisional	95.84
PRK09242	257	tropinone reductase; Provisional	95.83
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.82
PLN02366	308	spermidine synthase	95.82
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.8
PRK06114	254	short chain dehydrogenase; Provisional	95.78
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.78
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.77
PRK08589	272	short chain dehydrogenase; Validated	95.77
PRK06138	252	short chain dehydrogenase; Provisional	95.76
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.75
PLN02253	280	xanthoxin dehydrogenase	95.75
PRK06125	259	short chain dehydrogenase; Provisional	95.74
PRK08643	256	acetoin reductase; Validated	95.74
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.74
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.73
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	95.72
PRK06198	260	short chain dehydrogenase; Provisional	95.7
PRK07035	252	short chain dehydrogenase; Provisional	95.69
PRK07856	252	short chain dehydrogenase; Provisional	95.69
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.69
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.68
PRK06720	169	hypothetical protein; Provisional	95.67
PRK06940	275	short chain dehydrogenase; Provisional	95.66
PRK05875	276	short chain dehydrogenase; Provisional	95.66
PRK11207	197	tellurite resistance protein TehB; Provisional	95.65
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.65
PRK07067	257	sorbitol dehydrogenase; Provisional	95.65
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.65
PRK08251	248	short chain dehydrogenase; Provisional	95.64
PRK08226	263	short chain dehydrogenase; Provisional	95.64
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.61
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.61
PRK00811	283	spermidine synthase; Provisional	95.6
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.6
PRK07074	257	short chain dehydrogenase; Provisional	95.59
PRK12747	252	short chain dehydrogenase; Provisional	95.59
PRK07340	304	ornithine cyclodeaminase; Validated	95.58
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.58
PRK06197	306	short chain dehydrogenase; Provisional	95.57
PRK07574	385	formate dehydrogenase; Provisional	95.57
PRK07791	286	short chain dehydrogenase; Provisional	95.56
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.56
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.55
PRK12367	245	short chain dehydrogenase; Provisional	95.55
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	95.55
PRK07102	243	short chain dehydrogenase; Provisional	95.54
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.53
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.53
PRK06141	314	ornithine cyclodeaminase; Validated	95.51
PRK08219	227	short chain dehydrogenase; Provisional	95.51
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.47
KOG0725	270	consensus Reductases with broad range of substrate	95.46
PRK08303	305	short chain dehydrogenase; Provisional	95.45
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.43
PRK08862	227	short chain dehydrogenase; Provisional	95.42
PRK13243	333	glyoxylate reductase; Reviewed	95.42
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.42
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.42
PRK08264	238	short chain dehydrogenase; Validated	95.42
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.39
PRK07577	234	short chain dehydrogenase; Provisional	95.38
PRK06914	280	short chain dehydrogenase; Provisional	95.38
PLN03139	386	formate dehydrogenase; Provisional	95.36
PRK06101	240	short chain dehydrogenase; Provisional	95.35
PLN02476	278	O-methyltransferase	95.34
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.3
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.3
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.28
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.28
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.26
PRK01581	374	speE spermidine synthase; Validated	95.25
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.25
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.21
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.2
PRK12743	256	oxidoreductase; Provisional	95.19
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.18
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.18
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	95.15
PRK08317	241	hypothetical protein; Provisional	95.15
PRK08278	273	short chain dehydrogenase; Provisional	95.13
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.12
PRK05650	270	short chain dehydrogenase; Provisional	95.12
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.09
PLN02928	347	oxidoreductase family protein	95.03
PLN03075	296	nicotianamine synthase; Provisional	95.01
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.99
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.99
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	94.98
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.96
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.95
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.95
PRK06523	260	short chain dehydrogenase; Provisional	94.91
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.91
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.89
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.88
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	94.86
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	94.85
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	94.85
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	94.84
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.83
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	94.83
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	94.8
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	94.79
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.78
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.75
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.74
PRK04266	226	fibrillarin; Provisional	94.73
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.71
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.7
PLN02244	340	tocopherol O-methyltransferase	94.68
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.66
PRK12746	254	short chain dehydrogenase; Provisional	94.66
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	94.66
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.63
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.61
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.6
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	94.59
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.59
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	94.59
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	94.59
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.55
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	94.55
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.52
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.5
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.5
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	94.49
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.48
PRK09135	249	pteridine reductase; Provisional	94.48
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	94.48
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.47
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	94.46
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	94.44
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.44
PRK07417	279	arogenate dehydrogenase; Reviewed	94.44
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	94.42
PRK12480	330	D-lactate dehydrogenase; Provisional	94.42
PRK08223	287	hypothetical protein; Validated	94.41
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	94.41
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.41
COG2910	211	Putative NADH-flavin reductase [General function p	94.41
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.38
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	94.37
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	94.37
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	94.36
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.36
PRK05855	582	short chain dehydrogenase; Validated	94.35
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.34
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	94.33
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	94.32
PRK07775	274	short chain dehydrogenase; Provisional	94.29
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	94.28
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.28
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	94.27
PRK08936	261	glucose-1-dehydrogenase; Provisional	94.26
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	94.26
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.26
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	94.25
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	94.24
PRK06849	389	hypothetical protein; Provisional	94.24
PRK08328	231	hypothetical protein; Provisional	94.23
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	94.19
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.17
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.16
PRK14982	340	acyl-ACP reductase; Provisional	94.15
PLN02256	304	arogenate dehydrogenase	94.14
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.14
PRK00536	262	speE spermidine synthase; Provisional	94.12
PRK04457	262	spermidine synthase; Provisional	94.08
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	94.07
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	94.06
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	94.05
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.04
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	94.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	93.98
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	93.97
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	93.94
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	93.94
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	93.93
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	93.89
PRK12935	247	acetoacetyl-CoA reductase; Provisional	93.87
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	93.87
PRK03562	621	glutathione-regulated potassium-efflux system prot	93.87
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	93.85
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	93.78
PRK13403	335	ketol-acid reductoisomerase; Provisional	93.78
PRK14903	431	16S rRNA methyltransferase B; Provisional	93.76
PRK10669	558	putative cation:proton antiport protein; Provision	93.75
COG0569	225	TrkA K+ transport systems, NAD-binding component [	93.74
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	93.71
PRK09134	258	short chain dehydrogenase; Provisional	93.7
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	93.69
PLN02686	367	cinnamoyl-CoA reductase	93.69
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	93.67
PRK08291	330	ectoine utilization protein EutC; Validated	93.66
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	93.64
PRK07578	199	short chain dehydrogenase; Provisional	93.64
PRK06947	248	glucose-1-dehydrogenase; Provisional	93.64
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.62
PRK11933	470	yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF;	93.61
PLN02896	353	cinnamyl-alcohol dehydrogenase	93.61
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	93.6
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.59
PLN02490	340	MPBQ/MSBQ methyltransferase	93.57
PRK05562	223	precorrin-2 dehydrogenase; Provisional	93.56
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	93.53
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	93.52
PRK07201	657	short chain dehydrogenase; Provisional	93.52

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=9e-60  Score=423.16  Aligned_cols=339  Identities=44%  Similarity=0.789  Sum_probs=321.4

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      ++++|.++.++++||+++++.+++|++||||||+.|+|+|++|.+.++|..  .+|.++|||++|+|++||++|+++++|
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpG   80 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPG   80 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCceecccccccEEEEecCCccccCCC
Confidence            368899999999999999999999999999999999999999999999987  789999999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccc-cccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVL-GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~-~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      |+|+......|+.|.+|+.|.+|+|... ...+.|.. .||+.++..+|.+.|++-+.++|+||.++++..++|++++.+
T Consensus        81 DhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p  159 (366)
T COG1062          81 DHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP  159 (366)
T ss_pred             CEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence            9999999999999999999999999966 34446766 899999999999999999999999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      ++.++.+.|...|++.++.+.+++++|++|.|.|.|++|++++|-|+..|+++||+++.+++|++++++||+++++|.++
T Consensus       160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~  239 (366)
T COG1062         160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE  239 (366)
T ss_pred             ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999874


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  327 (353)
                      .. +..+.+.+++++++|++|||+|+...++.+++++.+ ||+.+.+|.......+++++..|..+.+++|+++++..++
T Consensus       240 ~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~  317 (366)
T COG1062         240 VD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR  317 (366)
T ss_pred             hh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence            22 699999999999999999999999999999999999 6999999999888888899998888999999999999999


Q ss_pred             CcHHHHHHHHHcCCCCCCCCccCCC
Q 018627          328 TDLPSLVNRYLKKVRNTRKPSCGNC  352 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~~~li~~~~  352 (353)
                      .|++++++|+.+|||++++||+++.
T Consensus       318 ~diP~lv~~y~~Gkl~~d~lvt~~~  342 (366)
T COG1062         318 SDIPRLVDLYMAGKLPLDRLVTHTI  342 (366)
T ss_pred             cchhHHHHHHHcCCCchhHHhhccc
Confidence            9999999999999999999999864

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.7e-59  Score=412.03  Aligned_cols=345  Identities=53%  Similarity=0.958  Sum_probs=328.5

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCC
Q 018627            8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      ..+.++||.+.+++++||.++++.+++|+.+||+||+.++++|++|...|.|..   .+|.++|||++|+|+.+|.+|++
T Consensus         3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~   82 (375)
T KOG0022|consen    3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT   82 (375)
T ss_pred             CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence            356799999999999999999999999999999999999999999999999884   78999999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      +++||+|+......|++|.+|+++..|.|.+..... .+.+..||..|+.-+|+++||+-+..+|+||.+++...+++|+
T Consensus        83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId  162 (375)
T KOG0022|consen   83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID  162 (375)
T ss_pred             cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence            999999999999999999999999999999986544 5666469999999999999999888899999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      +..+++.++.+.|.++|+|+|.++.+++++|+++.|.|-|++|+++++-||+.|+++||++|.+++|.+.++++|+++++
T Consensus       163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i  242 (375)
T KOG0022|consen  163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI  242 (375)
T ss_pred             CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC
Q 018627          244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG  323 (353)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  323 (353)
                      |..+......+.+++++++++|+-|||+|+.+.+.+++.....+||.-|.+|.....+.+.+.++.++.+.++.|+.++.
T Consensus       243 Np~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG  322 (375)
T KOG0022|consen  243 NPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGG  322 (375)
T ss_pred             ChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEeccc
Confidence            98865556889999999999999999999999999999999999999999999998899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHcCCCCCCCCccCCC
Q 018627          324 WKPKTDLPSLVNRYLKKVRNTRKPSCGNC  352 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i~~~~li~~~~  352 (353)
                      |+.+.+++.+.+.+.+++++++++|+|+-
T Consensus       323 ~K~~~~iP~lV~~y~~~~l~ld~~ITh~l  351 (375)
T KOG0022|consen  323 FKSKSDIPKLVKDYMKKKLNLDEFITHEL  351 (375)
T ss_pred             ccchhhhhHHHHHHHhCccchhhhhhccc
Confidence            99999999999999999999999999863

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=5.6e-59  Score=426.66  Aligned_cols=303  Identities=30%  Similarity=0.433  Sum_probs=273.2

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCC
Q 018627           10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      +++|||+++.++++++++++++.|+|+++||+|+|+++|+|++|++.+.|.+   .+|+++|||.+|+|+++|++|++|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            3589999999999999999999999999999999999999999999999988   7899999999999999999999999


Q ss_pred             CCCeEEe-ecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           87 EGEHVLT-VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        87 vGd~V~~-~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      +||||.+ +...+|++|.+|+.|++++|++.....+.                     ..|+||||+++|+++++++|++
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~---------------------~~GGyaeyv~v~~~~~~~iP~~  139 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYT---------------------TDGGYAEYVVVPARYVVKIPEG  139 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCcccccee---------------------ecCcceeEEEEchHHeEECCCC
Confidence            9999988 88889999999999999999986643222                     3369999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +++++||.+.|+..|.|++| +..++++|++|+|+|.|++|++++|+|+++|+ +|++++++++|++.++++|++++++.
T Consensus       140 ~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~  217 (339)
T COG1064         140 LDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINS  217 (339)
T ss_pred             CChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEc
Confidence            99999999999999999998 55899999999999999999999999999998 99999999999999999999999987


Q ss_pred             CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCC
Q 018627          246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGW  324 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  324 (353)
                      +  +.+..+.+++.    +|+++|+++ +..++.+++.|+++ |+++++|.........++... ++++++|.|+..++ 
T Consensus       218 ~--~~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~-  288 (339)
T COG1064         218 S--DSDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT-  288 (339)
T ss_pred             C--CchhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC-
Confidence            6  56667777663    999999999 89999999999997 999999998522323344443 46799999999887 


Q ss_pred             CCCCcHHHHHHHHHcCCCCCCC
Q 018627          325 KPKTDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~~~  346 (353)
                        +.|+++++++..+|+++|.-
T Consensus       289 --~~d~~e~l~f~~~g~Ikp~i  308 (339)
T COG1064         289 --RADLEEALDFAAEGKIKPEI  308 (339)
T ss_pred             --HHHHHHHHHHHHhCCceeeE
Confidence              57899999999999998754

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1e-57  Score=406.51  Aligned_cols=313  Identities=25%  Similarity=0.378  Sum_probs=280.9

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +|+|+++.+++. ++++++|.|++ .|+||+|++.++|||+||+|.|....      +.|+++|||.+|+|+++|+.|++
T Consensus         4 ~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~   82 (354)
T KOG0024|consen    4 DNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKH   82 (354)
T ss_pred             ccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccc
Confidence            688999999998 99999999997 99999999999999999999997766      57999999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      ++|||||+..|..+|..|+.||+|+||.|+...+-..+..                    .|++++|+++++++++|+|+
T Consensus        83 LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~--------------------~G~la~y~~~~~dfc~KLPd  142 (354)
T KOG0024|consen   83 LKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPV--------------------DGTLAEYYVHPADFCYKLPD  142 (354)
T ss_pred             cccCCeEEecCCCccccchhhhCcccccCCccccccCCCc--------------------CCceEEEEEechHheeeCCC
Confidence            9999999999999999999999999999999988665543                    25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++|++++|++. ++++++||. ++++++.|++|||+|+|++|+.+...|+++|+++|+.++..+.|++.++++|++.+.+
T Consensus       143 ~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~  220 (354)
T KOG0024|consen  143 NVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDP  220 (354)
T ss_pred             CCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEee
Confidence            99999999998 899999998 7799999999999999999999999999999999999999999999999999999877


Q ss_pred             CCCCC--ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeec
Q 018627          245 PNDNN--EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF  321 (353)
Q Consensus       245 ~~~~~--~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  321 (353)
                      .....  ..+.+.+....+. .+|+.|||+|....++.++..++.+ |+++++|+.....++++... .++++.++|++-
T Consensus       221 ~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v-~~kE~~~~g~fr  298 (354)
T KOG0024|consen  221 SSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDV-ALKEVDLRGSFR  298 (354)
T ss_pred             ccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhh-hhheeeeeeeee
Confidence            65322  3344455554443 6999999999988999999999997 99999999887667665554 478999999874


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCCCCCccCCC
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNTRKPSCGNC  352 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~~~li~~~~  352 (353)
                      +.   ..+++.+++++++||+++++||||+-
T Consensus       299 y~---~~~y~~ai~li~sGki~~k~lIT~r~  326 (354)
T KOG0024|consen  299 YC---NGDYPTAIELVSSGKIDVKPLITHRY  326 (354)
T ss_pred             ec---cccHHHHHHHHHcCCcCchhheeccc
Confidence            44   46899999999999999999999973

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.8e-52  Score=369.89  Aligned_cols=314  Identities=25%  Similarity=0.403  Sum_probs=276.2

Q ss_pred             CCccceeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCC
Q 018627            7 QPQVITCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPG   81 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~   81 (353)
                      +..|.+.++|.+..++.  ++++.+++.|+|+++||+|+|+++|||++|++.|.+.+   .+|+++|||.+|+|+++|++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~   83 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN   83 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence            45677999999999988  57889999999999999999999999999999999887   89999999999999999999


Q ss_pred             CCCCCCCCeE-EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627           82 VTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (353)
Q Consensus        82 ~~~~~vGd~V-~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~  160 (353)
                      |++|++|||| +.+...+|..|.+|+++..++|++....++|.. .||+..             .|+|++|+++++.+++
T Consensus        84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~-~DGt~~-------------~ggf~~~~~v~~~~a~  149 (360)
T KOG0023|consen   84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVY-HDGTIT-------------QGGFQEYAVVDEVFAI  149 (360)
T ss_pred             cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccc-cCCCCc-------------cCccceeEEEeeeeEE
Confidence            9999999999 556778999999999999999999988888888 777433             4799999999999999


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHHHhCCC
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGV  239 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~  239 (353)
                      +||++++++.||.+.|+..|.|.+| ...++.||+++-|.|+|++|.+++|+|+++|. +|+++++++ +|.+.++.+||
T Consensus       150 kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGA  227 (360)
T KOG0023|consen  150 KIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGA  227 (360)
T ss_pred             ECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCc
Confidence            9999999999999999999999998 56788899999999997799999999999999 999998887 66777788999


Q ss_pred             ceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEee
Q 018627          240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS  319 (353)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~  319 (353)
                      +.+++..+ +.++.+.+...+++.+|-+.+-  ....++.++.+++++ |++|++|.+.....++..++ .++.++|.|+
T Consensus       228 d~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~~~~~~~~~l-il~~~~I~GS  302 (360)
T KOG0023|consen  228 DVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEKPLKLDTFPL-ILGRKSIKGS  302 (360)
T ss_pred             ceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCCcccccchhh-hcccEEEEee
Confidence            99988764 6889999998877777777765  346789999999998 99999999876444443333 3678999999


Q ss_pred             ecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627          320 LFGGWKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       320 ~~~~~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      ..++   +.+.++++++..+|.+.+
T Consensus       303 ~vG~---~ket~E~Ldf~a~~~ik~  324 (360)
T KOG0023|consen  303 IVGS---RKETQEALDFVARGLIKS  324 (360)
T ss_pred             cccc---HHHHHHHHHHHHcCCCcC
Confidence            9988   467888888888887764

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=3.1e-51  Score=392.65  Aligned_cols=350  Identities=80%  Similarity=1.316  Sum_probs=287.7

Q ss_pred             CccccCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCC
Q 018627            2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPG   81 (353)
Q Consensus         2 ~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~   81 (353)
                      |++..+|....|||+++.++++.++++++|.|+|+++||+|||.++|+|++|++.+.+...+|.++|||++|+|+++|++
T Consensus         2 ~~~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~~~p~i~GhE~~G~V~~vG~~   81 (378)
T PLN02827          2 SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQALFPRIFGHEASGIVESIGEG   81 (378)
T ss_pred             CccccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCCCCCeeecccceEEEEEcCCC
Confidence            45667787789999999998877999999999999999999999999999999988775467899999999999999999


Q ss_pred             CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627           82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (353)
Q Consensus        82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~  161 (353)
                      +++|++||||++.+...|++|.+|+.|.+++|+.......|....++..++...|...++++..|+|+||+.+|++.+++
T Consensus        82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~  161 (378)
T PLN02827         82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (378)
T ss_pred             CcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEE
Confidence            99999999999998889999999999999999875432222211111111111222222222347999999999999999


Q ss_pred             CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      +|+++++++++.+.+.+.++|+++++..++++|++|||+|+|++|++++|+|+++|++.|+++++++++.+.++++|+++
T Consensus       162 iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~  241 (378)
T PLN02827        162 VDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTD  241 (378)
T ss_pred             CCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence            99999999999999899999998877788999999999999999999999999999967889988999999999999999


Q ss_pred             EeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeec
Q 018627          242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF  321 (353)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  321 (353)
                      ++++.+.+.++.+.+++++++++|++||++|....+..+++.+++++|+++.+|.......+......+++++++.|+..
T Consensus       242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  321 (378)
T PLN02827        242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF  321 (378)
T ss_pred             EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence            98876323467777877776689999999998777899999999933999999986543333322233467999999988


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNTRKPSCGN  351 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~~~li~~~  351 (353)
                      +.+....++.++++++++|+|+++++|++.
T Consensus       322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~  351 (378)
T PLN02827        322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHN  351 (378)
T ss_pred             CCCchhhhHHHHHHHHHcCCCChHHheEEE
Confidence            776555689999999999999998888753

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=5.2e-51  Score=391.71  Aligned_cols=346  Identities=51%  Similarity=0.950  Sum_probs=286.3

Q ss_pred             ccCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCC
Q 018627            5 IKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGP   80 (353)
Q Consensus         5 ~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~   80 (353)
                      .+++.|++|||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|..    .+|.++|||++|+|+++|+
T Consensus         3 ~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~   82 (381)
T PLN02740          3 ETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGE   82 (381)
T ss_pred             cccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCC
Confidence            355677899999999998889999999999999999999999999999999988754    4689999999999999999


Q ss_pred             CCCCCCCCCeEEeecccCCCCCcccccCCCCCccccccccccc-ccCCccccccc--cCCccccccCccceeeeEEEeCC
Q 018627           81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV-MHSDQQTRFSI--KGKPVYHYCAVSSFSEYTVVHSG  157 (353)
Q Consensus        81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~-~~~~g~~~~~~--~~~~~~~~~~~g~~a~~~~~~~~  157 (353)
                      ++++|++||||++.+..+|+.|.+|+.|+++.|++......+. ...+|..+++.  .+...++....|+|+||+++|.+
T Consensus        83 ~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~  162 (381)
T PLN02740         83 GVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSA  162 (381)
T ss_pred             CCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehH
Confidence            9999999999999999999999999999999998865321100 00011000000  00111112224799999999999


Q ss_pred             ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      .++++|+++++++++.+++++.|||+++++.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++++.++++
T Consensus       163 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~  242 (381)
T PLN02740        163 CVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEM  242 (381)
T ss_pred             HeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHc
Confidence            99999999999999999999999999987888999999999999999999999999999996799999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEE
Q 018627          238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK  317 (353)
Q Consensus       238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~  317 (353)
                      |++.++++.+...++.+.+++++++++|++||++|.+..+..++.++++++|+++.+|.......+++.+..+++++++.
T Consensus       243 Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~  322 (381)
T PLN02740        243 GITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSIT  322 (381)
T ss_pred             CCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEE
Confidence            99999887632345777888777668999999999878899999999883399999998755334555555456789999


Q ss_pred             eeecCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          318 GSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       318 g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      |++.+.+....++.++++++.+|++++.+++++
T Consensus       323 g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~  355 (381)
T PLN02740        323 GSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITH  355 (381)
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCChHHheeE
Confidence            998877655568999999999999998888765

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=2.6e-50  Score=385.60  Aligned_cols=335  Identities=35%  Similarity=0.618  Sum_probs=279.2

Q ss_pred             eeEEEEecCC--------CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCC
Q 018627           13 CKAAVAWGAG--------QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV   82 (353)
Q Consensus        13 ~~a~~~~~~~--------~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~   82 (353)
                      |||+++.+++        +.++++++|.|+|+++||+|||.+++||++|++.+.|..  .+|.++|||++|+|+++|+++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~v   80 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAAGVVVEVGEGV   80 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCCCCCccCCccceeEEEEeCCCC
Confidence            7899999865        349999999999999999999999999999999988864  568899999999999999999


Q ss_pred             CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627           83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (353)
Q Consensus        83 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~  161 (353)
                      +++++||||++.+...|+.|..|+.|.++.|....... .|.. .+|+.++..++...++..+.|+|+||+.+|++.+++
T Consensus        81 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~  159 (371)
T cd08281          81 TDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK  159 (371)
T ss_pred             CcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceEE
Confidence            99999999999888899999999999999998764321 1111 111111111111111112236999999999999999


Q ss_pred             CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      +|+++++++|+.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.
T Consensus       160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~  239 (371)
T cd08281         160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA  239 (371)
T ss_pred             CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence            99999999999999999999999878888999999999999999999999999999977999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeee
Q 018627          242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSL  320 (353)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  320 (353)
                      ++++.  +.++.+.+++.+++++|++|||+|.+..+..+++.++++ |+++.+|.......+.+....+ .+++++.|++
T Consensus       240 ~i~~~--~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  316 (371)
T cd08281         240 TVNAG--DPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSY  316 (371)
T ss_pred             EeCCC--chhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence            98876  467778888877668999999999878899999999997 9999999865323344454444 4699999998


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627          321 FGGWKPKTDLPSLVNRYLKKVRNTRKPSCGN  351 (353)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~g~i~~~~li~~~  351 (353)
                      .+.+...++++++++++++|++++++++++.
T Consensus       317 ~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~  347 (371)
T cd08281         317 MGSCVPRRDIPRYLALYLSGRLPVDKLLTHR  347 (371)
T ss_pred             cCCCChHHHHHHHHHHHHcCCCCchhheeee
Confidence            8776556789999999999999998888753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=5e-50  Score=383.17  Aligned_cols=338  Identities=45%  Similarity=0.842  Sum_probs=280.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++..++++++++++|.|+|+++||+|||.++++|++|++.+.|..   .+|.++|||++|+|+++|+++++|++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            8899999998889999999999999999999999999999999888764   4689999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCccccccc-ccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL  168 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~  168 (353)
                      ||++.+...|+.|.+|+.|.++.|.+.... ..|.. .+|..++..+|.+.++....|+|+||+++|++.++++|+++++
T Consensus        82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~  160 (368)
T TIGR02818        82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL  160 (368)
T ss_pred             EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence            999998899999999999999999875321 11222 2232222233333333333479999999999999999999999


Q ss_pred             hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      ++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|++.++++.+.
T Consensus       161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~  240 (368)
T TIGR02818       161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY  240 (368)
T ss_pred             HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence            99999999999999998788899999999999999999999999999999779999999999999999999998887632


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCC
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT  328 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  328 (353)
                      +.++.+.+++++++++|++|||+|.+..+..+++++++++|+++.+|.......+++.+..++++..+.++..+.+..++
T Consensus       241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  320 (368)
T TIGR02818       241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT  320 (368)
T ss_pred             chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence            34566777777766899999999987788999999987339999999864323344444444455567777665544456


Q ss_pred             cHHHHHHHHHcCCCCCCCCccCC
Q 018627          329 DLPSLVNRYLKKVRNTRKPSCGN  351 (353)
Q Consensus       329 ~~~~~~~~l~~g~i~~~~li~~~  351 (353)
                      ++.++++++++|++++++++++.
T Consensus       321 ~~~~~~~~~~~g~i~~~~~it~~  343 (368)
T TIGR02818       321 ELPGIVEQYMKGEIALDDFVTHT  343 (368)
T ss_pred             HHHHHHHHHHCCCCCchhheeEE
Confidence            79999999999999998888754

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.5e-49  Score=379.89  Aligned_cols=339  Identities=49%  Similarity=0.918  Sum_probs=283.5

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      +|||+++..++++++++++|.|.|+++||+|||+++++|++|++.+.|..   .+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   81 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG   81 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence            68999999888889999999999999999999999999999999887754   568899999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCccccccc-ccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      |||++.+...|++|.+|+.|+++.|.+.... +.|.. .+|..++..+|.+.++....|+|+||+.++++.++++|++++
T Consensus        82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~  160 (368)
T cd08300          82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP  160 (368)
T ss_pred             CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence            9999998999999999999999999875321 12222 233222222333334333457999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      +++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++.+
T Consensus       161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~  240 (368)
T cd08300         161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD  240 (368)
T ss_pred             hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            99999999999999999878888999999999998999999999999999977999999999999999999999998763


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  327 (353)
                      .+.++.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+...+..+.++..+.++..+.|..+
T Consensus       241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  320 (368)
T cd08300         241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR  320 (368)
T ss_pred             cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence            22357778888776789999999998778899999998734999999976432334444444455667788877777667


Q ss_pred             CcHHHHHHHHHcCCCCCCCCccCC
Q 018627          328 TDLPSLVNRYLKKVRNTRKPSCGN  351 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~~~li~~~  351 (353)
                      +++.++++++.+|++++.+++++.
T Consensus       321 ~~~~~~~~~~~~g~l~~~~~i~~~  344 (368)
T cd08300         321 SQVPKLVEDYMKGKIKVDEFITHT  344 (368)
T ss_pred             HHHHHHHHHHHcCCCChhhceeee
Confidence            889999999999999998888753

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=1.6e-49  Score=379.99  Aligned_cols=339  Identities=61%  Similarity=1.098  Sum_probs=283.3

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      +|||+++.+++++++++++|.|+|+++||+|||.+++||++|++.+.|..   .+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG   81 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence            79999999988889999999999999999999999999999999888764   468999999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      |||++.+...|++|..|+.|.++.|.+..... .|....++...+...|...|+....|+|+||+++++..++++|++++
T Consensus        82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  161 (369)
T cd08301          82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP  161 (369)
T ss_pred             CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence            99999999999999999999999998754211 11110111111111222223332346999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      +++++.+++.+.|+|+++++..++++|++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++|++.++++.+
T Consensus       162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~  241 (369)
T cd08301         162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD  241 (369)
T ss_pred             HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence            99999999999999999888889999999999999999999999999999877999999999999999999999888763


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  327 (353)
                      .+..+.+.+++.+++++|++||++|.+..+..+++++++++|+++.+|.......+++.+..+++++++.|++.+.+..+
T Consensus       242 ~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  321 (369)
T cd08301         242 HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPK  321 (369)
T ss_pred             cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChH
Confidence            22456677777776689999999998778899999999922999999987643445555554567999999988777666


Q ss_pred             CcHHHHHHHHHcCCCCCCCCccC
Q 018627          328 TDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      .+++++++++.+|++++++++++
T Consensus       322 ~~~~~~~~~~~~g~~~~~~~i~~  344 (369)
T cd08301         322 TDLPNLVEKYMKKELELEKFITH  344 (369)
T ss_pred             HHHHHHHHHHHcCCCCcHHheee
Confidence            78999999999999998887765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=5.5e-49  Score=375.70  Aligned_cols=337  Identities=50%  Similarity=0.937  Sum_probs=285.1

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      +|||+++..++++++++++|.|.++++||+|||+++++|++|++.+.|..  .+|.++|||++|+|+++|++++++++||
T Consensus         2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   81 (365)
T cd08277           2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLFPVILGHEGAGIVESVGEGVTNLKPGD   81 (365)
T ss_pred             ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCCCCCCeecccceeEEEEeeCCCCccCCCCC
Confidence            68999999888889999999999999999999999999999999988764  5678999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      ||++.+...|++|.+|+.|.++.|++..+...|.. .++..+....|...++....|+|+||++++.+.++++|++++++
T Consensus        82 rV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~  160 (365)
T cd08277          82 KVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLE  160 (365)
T ss_pred             EEEECCCCCCCCCchhcCcCcccCcCccccccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHH
Confidence            99999889999999999999999998776555554 33322222233333333334799999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN  249 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~  249 (353)
                      +++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|+++++++++++.++++|+++++++.+..
T Consensus       161 ~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~  240 (365)
T cd08277         161 HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSD  240 (365)
T ss_pred             HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccccc
Confidence            99999999999999987888899999999998899999999999999997799999999999999999999998876323


Q ss_pred             ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCc
Q 018627          250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD  329 (353)
Q Consensus       250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  329 (353)
                      ..+.+.+++++++++|++|||+|.+..+..+++++++++|+++.+|.... ..+++.+..++.++++.|++.+.+..+.+
T Consensus       241 ~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  319 (365)
T cd08277         241 KPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKSRSD  319 (365)
T ss_pred             chHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCChHHH
Confidence            34566777766668999999999877889999999873399999998653 23344454455589999998887765678


Q ss_pred             HHHHHHHHHcCCCCCCCCccC
Q 018627          330 LPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       330 ~~~~~~~l~~g~i~~~~li~~  350 (353)
                      +++++++++++++++++++++
T Consensus       320 ~~~~~~~~~~~~~~~~~~i~~  340 (365)
T cd08277         320 VPKLVSKYMNKKFDLDELITH  340 (365)
T ss_pred             HHHHHHHHHCCCcChhHheee
Confidence            999999999999998888875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=3.6e-49  Score=376.05  Aligned_cols=328  Identities=31%  Similarity=0.495  Sum_probs=276.5

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      ||||+++.+++++++++++|.|+|+++||+|||.++++|++|++.+.|..  .+|.++|||++|+|+++|+++++|++||
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   80 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGD   80 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccccCCcccccceEEEEEEeCCCCcccCCCC
Confidence            69999999999889999999999999999999999999999999888754  5789999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      ||++.+...|+.|..|+.|++++|.............+|.        ........|+|+||+.+|++.++++|++++++
T Consensus        81 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~--------~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~  152 (358)
T TIGR03451        81 YVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGT--------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPA  152 (358)
T ss_pred             EEEEccCCCCCCChHHhCcCcccCcCccccccccccccCc--------ccccccccccccceEEEehhheEECCCCCChh
Confidence            9999999999999999999999997532211100001110        00000013699999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN  249 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~  249 (353)
                      +++.+++.+.++|+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|++.++++.  +
T Consensus       153 ~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~--~  230 (358)
T TIGR03451       153 AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS--G  230 (358)
T ss_pred             HhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC--C
Confidence            99999999999999887778899999999999999999999999999996699999999999999999999999876  4


Q ss_pred             ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627          250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       250 ~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~  327 (353)
                      .++.+.+++.+++ ++|++|||+|++..+..+++.++++ |+++.+|.......+.++...+ .+++++.+++.+.....
T Consensus       231 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  309 (358)
T TIGR03451       231 TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPE  309 (358)
T ss_pred             cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcH
Confidence            5677888887776 8999999999877899999999997 9999999865433344444333 45899998876544446


Q ss_pred             CcHHHHHHHHHcCCCCCCCCccC
Q 018627          328 TDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      ++++++++++++|++++.++|++
T Consensus       310 ~~~~~~~~l~~~g~l~~~~~i~~  332 (358)
T TIGR03451       310 RDFPMLVDLYLQGRLPLDAFVTE  332 (358)
T ss_pred             HHHHHHHHHHHcCCCCchheEEE
Confidence            78999999999999999888775

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=6.9e-48  Score=364.37  Aligned_cols=308  Identities=29%  Similarity=0.430  Sum_probs=265.8

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |||+++.+++. ++++++|.|+|+++||+||+.++++|++|++.+.+..    .+|.++|||++|+|+++|++++++++|
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            78999988765 9999999999999999999999999999998876653    257899999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL  168 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~  168 (353)
                      |||+..+...|+.|..|+.|+++.|.+... ..|.. .                  .|+|+||+.+|.+.++++|+++++
T Consensus        80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~g~~-~------------------~G~~ae~~~v~~~~~~~~P~~~~~  139 (339)
T cd08239          80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA-AYGWN-R------------------DGGHAEYMLVPEKTLIPLPDDLSF  139 (339)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCcCccc-ccccC-C------------------CCcceeEEEechHHeEECCCCCCH
Confidence            999999999999999999999999987543 22322 1                  259999999999999999999999


Q ss_pred             hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      ++|+.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++|++.+++++  
T Consensus       140 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~--  216 (339)
T cd08239         140 ADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSG--  216 (339)
T ss_pred             HHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCC--
Confidence            99999999999999998 557889999999999999999999999999995599999999999999999999999886  


Q ss_pred             CccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627          249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       249 ~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  327 (353)
                      +.+ .+.+++.+++ ++|++|||+|+...+..++++++++ |+++.+|.... ..+......+.+++++.|++...   .
T Consensus       217 ~~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~  290 (339)
T cd08239         217 QDD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---V  290 (339)
T ss_pred             cch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---H
Confidence            334 5667777766 8999999999877778899999997 99999997654 33332223345799999987654   4


Q ss_pred             CcHHHHHHHHHcCCCCCCCCccC
Q 018627          328 TDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      +++.++++++++|++++.++++.
T Consensus       291 ~~~~~~~~~~~~g~i~~~~~i~~  313 (339)
T cd08239         291 PDMEECAEFLARHKLEVDRLVTH  313 (339)
T ss_pred             HHHHHHHHHHHcCCCChhHeEEE
Confidence            68999999999999999888864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7.1e-47  Score=358.23  Aligned_cols=307  Identities=22%  Similarity=0.358  Sum_probs=253.5

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhc-cCC-----CCCcccccceeEEEEEeCCCCCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      ..++|.+++++++ ++++++|.| ++++||||||.++|||++|++.+. +..     .+|.++|||++|+|+++  ++++
T Consensus         3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            3688999998888 999999997 689999999999999999998774 321     56899999999999999  6789


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||+..+..+|++|.+|+.|+++.|.+..+.+.+..+.                ...|+|+||++++++.++++|+
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~----------------~~~G~~aey~~v~~~~~~~~P~  142 (343)
T PRK09880         79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFP----------------HVDGGFTRYKVVDTAQCIPYPE  142 (343)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccC----------------CCCCceeeeEEechHHeEECCC
Confidence            999999999999999999999999999998865421110000                0126999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++++++++.. .++++||+++.+ ....+|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|++.+++
T Consensus       143 ~l~~~~aa~~-~~~~~a~~al~~-~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~  220 (343)
T PRK09880        143 KADEKVMAFA-EPLAVAIHAAHQ-AGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVN  220 (343)
T ss_pred             CCCHHHHHhh-cHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEec
Confidence            9999876654 488899999844 56668999999999999999999999999977999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627          245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG  323 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  323 (353)
                      +.  +.++.+..+  ..+++|++|||+|.+..+..++++++++ |+++.+|.......+  +...+ .+++++.|++.. 
T Consensus       221 ~~--~~~~~~~~~--~~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~--~~~~~~~k~~~i~g~~~~-  292 (343)
T PRK09880        221 PQ--NDDLDHYKA--EKGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPPEF--PMMTLIVKEISLKGSFRF-  292 (343)
T ss_pred             CC--cccHHHHhc--cCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCcc--CHHHHHhCCcEEEEEeec-
Confidence            76  334433222  1236999999999877889999999997 999999976543333  33333 569999988643 


Q ss_pred             CCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          324 WKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                         .++++++++++++|+|++.+++++
T Consensus       293 ---~~~~~~~~~l~~~g~i~~~~~i~~  316 (343)
T PRK09880        293 ---TEEFNTAVSWLANGVINPLPLLSA  316 (343)
T ss_pred             ---cccHHHHHHHHHcCCCCchhheEE
Confidence               368999999999999999888765

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=9.3e-47  Score=357.10  Aligned_cols=315  Identities=29%  Similarity=0.381  Sum_probs=255.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCc-ccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPR-IFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~-~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |++++++.++...++++.+.|.+.|+||+|||.++|||+||++.+++..   ..|. ++|||++|+|+++| .+..+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G   79 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG   79 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence            5677777777645578887778899999999999999999999999875   4445 99999999999999 77889999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE-CCCCCC
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK-VSSIAP  167 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~-iP~~l~  167 (353)
                      |||++.+..+|+.|.+|+.|.+|.|++...........+                -.|+|+||+++|.+.+++ +|+++ 
T Consensus        80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~----------------~~G~~aEyv~vp~~~~~~~~pd~~-  142 (350)
T COG1063          80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGG----------------IDGGFAEYVRVPADFNLAKLPDGI-  142 (350)
T ss_pred             CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCC----------------CCCceEEEEEeccccCeecCCCCC-
Confidence            999999999999999999999999995542211110000                125999999999765555 58888 


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPN  246 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~  246 (353)
                      ..+++++..++++++++........++.+|+|+|+|++|++++++++.+|+++|++++.+++|++++++ .|++.+++..
T Consensus       143 ~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~  222 (350)
T COG1063         143 DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPS  222 (350)
T ss_pred             ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCc
Confidence            566666666999998774345555666699999999999999999999999999999999999999999 6666666554


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGW  324 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  324 (353)
                        ..+....+.+.+++ ++|++|||+|.+..+..+++.++++ |+++.+|....... .+.... +.+++++.|+.... 
T Consensus       223 --~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~~-  297 (350)
T COG1063         223 --EDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRPS-  297 (350)
T ss_pred             --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCCC-
Confidence              22667777788888 9999999999988899999999997 99999999876442 333322 45799999984322 


Q ss_pred             CCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627          325 KPKTDLPSLVNRYLKKVRNTRKPSCGN  351 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~~~li~~~  351 (353)
                       .+.+++.+++++.+|++++.++++++
T Consensus       298 -~~~~~~~~~~ll~~g~i~~~~lit~~  323 (350)
T COG1063         298 -GREDFERALDLLASGKIDPEKLITHR  323 (350)
T ss_pred             -CcccHHHHHHHHHcCCCChhHceEee
Confidence             24689999999999999999998765

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=5.4e-46  Score=347.76  Aligned_cols=283  Identities=28%  Similarity=0.384  Sum_probs=243.8

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+.+.+  ++++++|.|.|++|||||||.+++||+.|...+.|..    ++|+++|.|++|+|+++|++++.|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            789999887766  8999999999999999999999999999999998863    5899999999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||||+... ..|                                            ..|+|+||+.+|++.++++|+++
T Consensus        81 ~GdrV~~~~-~~~--------------------------------------------~~G~~AEy~~v~a~~~~~~P~~l  115 (326)
T COG0604          81 VGDRVAALG-GVG--------------------------------------------RDGGYAEYVVVPADWLVPLPDGL  115 (326)
T ss_pred             CCCEEEEcc-CCC--------------------------------------------CCCcceeEEEecHHHceeCCCCC
Confidence            999999873 100                                            12699999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++++||++++++.|||+++.+..++++|++|||+|+ |++|.+++|+|+++|+ +++++.+++++.+.++++|++++++|
T Consensus       116 s~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y  194 (326)
T COG0604         116 SFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY  194 (326)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcC
Confidence            999999999999999999999899999999999986 9999999999999998 66666677777779999999999998


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~  323 (353)
                      +  +.++.+.+++++++ ++|+|||++|+ ..+..+++.++++ |+++.+|...+...++++...++ +++.++|.....
T Consensus       195 ~--~~~~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~  270 (326)
T COG0604         195 R--EEDFVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGS  270 (326)
T ss_pred             C--cccHHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEeccee
Confidence            7  66799999999988 99999999998 6778899999997 99999999773234344444333 477777777654


Q ss_pred             C--C-CCCcHHHHHHHHHcCCCCCC
Q 018627          324 W--K-PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       324 ~--~-~~~~~~~~~~~l~~g~i~~~  345 (353)
                      .  . ..+.+.++.+++++|++++.
T Consensus       271 ~~~~~~~~~~~~l~~~~~~g~l~~~  295 (326)
T COG0604         271 RDPEALAEALAELFDLLASGKLKPV  295 (326)
T ss_pred             cchHHHHHHHHHHHHHHHcCCCcce
Confidence            3  1 12456789999999999764

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=7.7e-46  Score=356.42  Aligned_cols=316  Identities=24%  Similarity=0.356  Sum_probs=250.4

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCC-------CCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQ-------PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV   82 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~-------~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~   82 (353)
                      -|||+++.++++ ++++++|.|+|+       +|||||||.++|||++|++.+.|..  .+|.++|||++|+|+++|+++
T Consensus         2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~V   80 (393)
T TIGR02819         2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDV   80 (393)
T ss_pred             CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCCCCCccccceeEEEEEEEcCcc
Confidence            489999998887 999999999984       6899999999999999999998764  568999999999999999999


Q ss_pred             CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccc----cccccCCccccccccCCccccccCccceeeeEEEeCC-
Q 018627           83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-  157 (353)
Q Consensus        83 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-  157 (353)
                      ++|++||||++.+...|+.|.+|+.|+++.|.+.....    .|.. ..+              ...|+|+||+++|+. 
T Consensus        81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~-~~~--------------~~~G~~aey~~v~~~~  145 (393)
T TIGR02819        81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYV-DMG--------------GWVGGQSEYVMVPYAD  145 (393)
T ss_pred             ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccc-ccC--------------CCCCceEEEEEechhh
Confidence            99999999999999999999999999999998743210    1110 000              012699999999964 


Q ss_pred             -ceEECCCCCCh----hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHH
Q 018627          158 -CAVKVSSIAPL----EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE  232 (353)
Q Consensus       158 -~v~~iP~~l~~----~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~  232 (353)
                       .++++|++++.    .+++.+.+++.++|+++ +..++++|++|||.|+|++|++++|+|+++|++.|++++++++|++
T Consensus       146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~  224 (393)
T TIGR02819       146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA  224 (393)
T ss_pred             CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence             79999998753    35677777999999987 4578999999999888999999999999999966777788899999


Q ss_pred             HHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCCh--------------HHHHHHHHHhccCCceEEEEcCC
Q 018627          233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT--------------GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       233 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .++++|++. +++.. +.++.+.+.+++++ ++|++||++|.+              ..++.+++.++++ |+++.+|..
T Consensus       225 ~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~  301 (393)
T TIGR02819       225 QARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLY  301 (393)
T ss_pred             HHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeec
Confidence            999999974 44321 34566777777766 899999999975              3799999999997 999999986


Q ss_pred             CC-CC-c---------eecchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          298 KL-KP-E---------VAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       298 ~~-~~-~---------~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      .. .. .         +++.... +.+++++.+...   ...+.+.++++++++|++++++++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~---~~~~~~~~~~~~~~~g~i~~~~~i~~  363 (393)
T TIGR02819       302 VTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT---PVMKYNRNLMQAILHDRVQIAKAVNV  363 (393)
T ss_pred             CCcccccccccccccccccchHHhhccCceEEeccC---ChhhhHHHHHHHHHcCCCCHHHceec
Confidence            32 11 1         1111211 134566665321   11233478999999999999888874

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-45  Score=345.20  Aligned_cols=311  Identities=24%  Similarity=0.340  Sum_probs=259.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhc-cC-CCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWE-TQ-AIFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~-g~-~~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.++++ ++++++|.|.| +++||+|||.++++|++|++.+. +. ..+|.++|||++|+|+++|+++++|++||
T Consensus         1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd   79 (347)
T PRK10309          1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGD   79 (347)
T ss_pred             CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            78999998876 99999999998 59999999999999999987532 21 25789999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      ||++.+...|+.|.+|+.|+++.|.....  .|.. .                  .|+|+||+.++++.++++|++++++
T Consensus        80 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-~------------------~G~~aey~~v~~~~~~~lP~~~s~~  138 (347)
T PRK10309         80 AVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSR-R------------------DGGNAEYIVVKRKNLFALPTDMPIE  138 (347)
T ss_pred             EEEECCCcCCCCCcchhCcCcccCCCcce--eccC-C------------------CCccceeEEeehHHeEECcCCCCHH
Confidence            99999999999999999999999976543  2211 1                  2599999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN  249 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~  249 (353)
                      +++.+. +++++++++ +...+++|++|||+|+|++|++++|+|+++|++.|+++++++++++.++++|++.+++++  +
T Consensus       139 ~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~--~  214 (347)
T PRK10309        139 DGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSR--E  214 (347)
T ss_pred             Hhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCc--c
Confidence            998875 667788875 667889999999999899999999999999996689999999999999999999998876  3


Q ss_pred             ccHHHHHHHHhcC-Ccc-EEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecc-h-hhhhcCcEEEeeecCCCC
Q 018627          250 EPVQQVIKRITDG-GAD-YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-Y-GLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       250 ~~~~~~~~~~~~~-~~d-vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~  325 (353)
                      .+ .+.+.+.+.+ ++| ++|||+|.+..+..++++++++ |+++.+|.......++.. . ..+.+++++.|++.+...
T Consensus       215 ~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  292 (347)
T PRK10309        215 MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSS  292 (347)
T ss_pred             cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccC
Confidence            33 4456666655 888 9999999877899999999997 999999986543223221 1 223569999998765322


Q ss_pred             --CCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627          326 --PKTDLPSLVNRYLKKVRNTRKPSCGN  351 (353)
Q Consensus       326 --~~~~~~~~~~~l~~g~i~~~~li~~~  351 (353)
                        .++++.++++++++|+++++++|++.
T Consensus       293 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~  320 (347)
T PRK10309        293 PWPGQEWETASRLLTERKLSLEPLIAHR  320 (347)
T ss_pred             CcchhHHHHHHHHHHcCCCCchhheEEE
Confidence              24679999999999999998888763

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=4.7e-45  Score=347.79  Aligned_cols=318  Identities=22%  Similarity=0.324  Sum_probs=256.9

Q ss_pred             CCccccCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEE
Q 018627            1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVES   77 (353)
Q Consensus         1 m~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~   77 (353)
                      |..+....-|+++.++++++..+.+++.+++.|+|+++||+|||.+++||++|++.+.|..   .+|.++|||++|+|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~   80 (360)
T PLN02586          1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK   80 (360)
T ss_pred             CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence            4555555677889999988887779999999999999999999999999999999887754   4689999999999999


Q ss_pred             eCCCCCCCCCCCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeC
Q 018627           78 VGPGVTEFNEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS  156 (353)
Q Consensus        78 vG~~~~~~~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~  156 (353)
                      +|+++++|++||||++.+. ..|+.|.+|+.|.++.|++..+...... .+|             ....|+|+||+++|+
T Consensus        81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~  146 (360)
T PLN02586         81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIG-HDG-------------TKNYGGYSDMIVVDQ  146 (360)
T ss_pred             ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccc-cCC-------------CcCCCccceEEEEch
Confidence            9999999999999986543 5799999999999999987653221100 011             001259999999999


Q ss_pred             CceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh-HHHHH
Q 018627          157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAK  235 (353)
Q Consensus       157 ~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~-~~~~~  235 (353)
                      +.++++|+++++++++.+++.+.|+|+++.+...+++|++|||.|+|++|++++|+|+++|+ +|++++.++++ .+.++
T Consensus       147 ~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~  225 (360)
T PLN02586        147 HFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAIN  225 (360)
T ss_pred             HHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHH
Confidence            99999999999999999999999999998666667899999999999999999999999999 77777666555 55668


Q ss_pred             hCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCc
Q 018627          236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGR  314 (353)
Q Consensus       236 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~  314 (353)
                      ++|++.++++.+  .   +.+++..+ ++|++||++|.+..+..++++++++ |+++.+|.......+  +...+ .+++
T Consensus       226 ~~Ga~~vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~--~~~~~~~~~~  296 (360)
T PLN02586        226 RLGADSFLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKPLEL--PIFPLVLGRK  296 (360)
T ss_pred             hCCCcEEEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCCCcc--CHHHHHhCCe
Confidence            899998887652  1   23444443 6999999999877889999999997 999999976443333  33333 4577


Q ss_pred             EEEeeecCCCCCCCcHHHHHHHHHcCCCCCC
Q 018627          315 TLKGSLFGGWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       315 ~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      .+.|+..+.   ..+++++++++++|+|++.
T Consensus       297 ~i~g~~~~~---~~~~~~~~~li~~g~i~~~  324 (360)
T PLN02586        297 LVGGSDIGG---IKETQEMLDFCAKHNITAD  324 (360)
T ss_pred             EEEEcCcCC---HHHHHHHHHHHHhCCCCCc
Confidence            777776543   3579999999999999863

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=4.4e-44  Score=342.73  Aligned_cols=340  Identities=48%  Similarity=0.837  Sum_probs=277.1

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCC
Q 018627            9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      ...+|||+++..++++++++++|.|++.++||+|||.++++|++|++.+.|..  .+|+++|||++|+|+++|+++..++
T Consensus         4 ~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~   83 (373)
T cd08299           4 KVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTPFPVILGHEAAGIVESVGEGVTTVK   83 (373)
T ss_pred             ccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCCCCCccccccceEEEEEeCCCCccCC
Confidence            34579999999988889999999999999999999999999999999987764  5688999999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      +||+|++.+..+|++|.+|+.++++.|+...... .|.. .++.-+...+|.+..+....|+|+||++++++.++++|++
T Consensus        84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~  162 (373)
T cd08299          84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA  162 (373)
T ss_pred             CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence            9999999988899999999999999998764321 1222 1111111122322222223479999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +++++++.+.+++.+||+++.+..++++|++|||+|+|++|++++++|+++|+.+|+++++++++++.++++|+++++++
T Consensus       163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~  242 (373)
T cd08299         163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP  242 (373)
T ss_pred             CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence            99999999999999999998788899999999999889999999999999998679999999999999999999988887


Q ss_pred             CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHh-ccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627          246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC-CDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW  324 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  324 (353)
                      .+...++.+.+.+++++++|+++||+|.+..+..++..+ +++ |+++.+|.......+++.+..+.++.++.++..+.+
T Consensus       243 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  321 (373)
T cd08299         243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGW  321 (373)
T ss_pred             cccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCC
Confidence            532234666677666568999999999767777777765 565 999999976543345555544556889999888777


Q ss_pred             CCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          325 KPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      ..++++.++++++.++.+++++++.+
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (373)
T cd08299         322 KSKDSVPKLVADYMAKKFNLDPLITH  347 (373)
T ss_pred             ccHHHHHHHHHHHHcCCCCchhheee
Confidence            65678888999888888877766543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=2.3e-44  Score=341.78  Aligned_cols=304  Identities=26%  Similarity=0.395  Sum_probs=257.8

Q ss_pred             EEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC-C---CCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627           16 AVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-A---IFPRIFGHEASGIVESVGPGVTEFNEGEHV   91 (353)
Q Consensus        16 ~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~-~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V   91 (353)
                      +++.+++++++++++|.|+|+++||+|||.++++|++|++.+.+. .   .+|.++|||++|+|+++|+++..+ +||||
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            567788877999999999999999999999999999999876332 2   568999999999999999999887 99999


Q ss_pred             EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC------C
Q 018627           92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS------I  165 (353)
Q Consensus        92 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~------~  165 (353)
                      ++.+...|++|..|+.|+++.|.....  .|.. .                  .|+|+||+.+|++.++++|+      +
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~-~------------------~G~~ae~~~v~~~~~~~ip~~~~~~~~  139 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKM--PGND-M------------------QGGFASHIVVPAKGLCVVDEARLAAAG  139 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCc--cCcC-C------------------CCcccceEEechHHeEECCcccccccC
Confidence            999999999999999999999976543  2211 1                  25999999999999999999      8


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +++++++.+.+++.++|+++. ...+++|++|||+|+|++|++++|+|+++|+ +|+++++++++++.++++|++.++++
T Consensus       140 ~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~  217 (349)
T TIGR03201       140 LPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNP  217 (349)
T ss_pred             CCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecC
Confidence            999999999999999999984 5789999999999999999999999999999 89999999999999999999998887


Q ss_pred             CCCC-ccHHHHHHHHhcC-Ccc----EEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEe
Q 018627          246 NDNN-EPVQQVIKRITDG-GAD----YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKG  318 (353)
Q Consensus       246 ~~~~-~~~~~~~~~~~~~-~~d----vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g  318 (353)
                      .+.+ .++.+.+++.+++ ++|    ++|||+|+...+..++++++++ |+++.+|.......+  ....+ .+++++.|
T Consensus       218 ~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~--~~~~~~~~~~~~~g  294 (349)
T TIGR03201       218 KDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEY--RLSNLMAFHARALG  294 (349)
T ss_pred             ccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCccc--CHHHHhhcccEEEE
Confidence            5321 3566777777776 776    8999999877888899999997 999999987543333  33333 34788888


Q ss_pred             eecCCCCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          319 SLFGGWKPKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      ++...   .++++++++++++|+|++.++++
T Consensus       295 ~~~~~---~~~~~~~~~~i~~g~i~~~~~i~  322 (349)
T TIGR03201       295 NWGCP---PDRYPAALDLVLDGKIQLGPFVE  322 (349)
T ss_pred             EecCC---HHHHHHHHHHHHcCCCCcccceE
Confidence            76433   46899999999999999887764

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.3e-44  Score=342.58  Aligned_cols=306  Identities=22%  Similarity=0.297  Sum_probs=243.5

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++..++.+++++++|.|+|+++||||||++++||++|++.+.|.+      .+|.++|||++|+|+++|++ ++|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            6899988655459999999999999999999999999999999988754      24689999999999999999 8999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||||+..+...|+.|.+|+.|+++.|........|....                  .|+|+||+.++++.++++|+++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~------------------~G~~aey~~~~~~~~~~~P~~~  141 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGL------------------HGFMREYFVDDPEYLVKVPPSL  141 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCC------------------CccceeEEEeccccEEECCCCC
Confidence            9999999988899999999999999998765432332101                  2599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHh------ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC---ChhhHHHHHhC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNV------ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT---NPEKCEKAKAF  237 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~------~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~---~~~~~~~~~~~  237 (353)
                      + + ++.+..+++++++++...      ...++|++|||+|+|++|++++|+|+++|+ +|+++++   +++|++.++++
T Consensus       142 ~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~  218 (355)
T cd08230         142 A-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEEL  218 (355)
T ss_pred             C-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHc
Confidence            8 4 444445777766554321      235689999999999999999999999999 8999887   68899999999


Q ss_pred             CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecc-----hhhhhc
Q 018627          238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-----YGLFLS  312 (353)
Q Consensus       238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-----~~~~~~  312 (353)
                      |++. +++.  +.++.+ .+  ..+++|+||||+|.+..+..+++.++++ |+++.+|.......+++.     ...+++
T Consensus       219 Ga~~-v~~~--~~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k  291 (355)
T cd08230         219 GATY-VNSS--KTPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLG  291 (355)
T ss_pred             CCEE-ecCC--ccchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhc
Confidence            9986 4554  333433 22  2348999999999877889999999997 999999987652333333     122357


Q ss_pred             CcEEEeeecCCCCCCCcHHHHHHHHHcCCC----CCCCCccC
Q 018627          313 GRTLKGSLFGGWKPKTDLPSLVNRYLKKVR----NTRKPSCG  350 (353)
Q Consensus       313 ~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i----~~~~li~~  350 (353)
                      ++++.|++.+.   ++++.++++++.++++    .+++++++
T Consensus       292 ~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~  330 (355)
T cd08230         292 NKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITR  330 (355)
T ss_pred             CcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheee
Confidence            99999986543   4689999999998873    24555553

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=6.5e-43  Score=333.81  Aligned_cols=334  Identities=47%  Similarity=0.828  Sum_probs=282.6

Q ss_pred             eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627           14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEHV   91 (353)
Q Consensus        14 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V   91 (353)
                      ||+++...++++++++.|.|++++++|+||+.++++|++|++.+.+..  .+|.++|||++|+|+++|++++.+++||+|
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~V   81 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDKV   81 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCEE
Confidence            688999888779999999999999999999999999999999887765  567899999999999999999999999999


Q ss_pred             EeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627           92 LTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK  170 (353)
Q Consensus        92 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~  170 (353)
                      ++.+...|+.|.+|+.+++++|......+ .|.. .+|+..+..+|.+.++..+.|+|++|++++++.++++|+++++++
T Consensus        82 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~  160 (365)
T cd05279          82 IPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEK  160 (365)
T ss_pred             EEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHH
Confidence            99988899999999999999998865432 2322 445555555555555555567999999999999999999999999


Q ss_pred             hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      ++.+.+++.+||+++.+..++.+|++|||+|+|++|++++++|+++|+..|+++++++++.+.++++|+++++++.+.+.
T Consensus       161 a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  240 (365)
T cd05279         161 VCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDK  240 (365)
T ss_pred             hhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccc
Confidence            99999999999999888889999999999988999999999999999966888888999999999999998888763222


Q ss_pred             cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhc-cCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCc
Q 018627          251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCC-DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD  329 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  329 (353)
                      ++.+.+++.+++++|+++|++|.+..+..++++++ ++ |+++.+|.........++...+.++.++.|++.+.+...++
T Consensus       241 ~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~  319 (365)
T cd05279         241 PIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKDS  319 (365)
T ss_pred             hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHhH
Confidence            67777777765699999999987678899999999 96 99999987642233444554445688899988777766788


Q ss_pred             HHHHHHHHHcCCCCCCCCcc
Q 018627          330 LPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       330 ~~~~~~~l~~g~i~~~~li~  349 (353)
                      +.+++++++++++++.+++.
T Consensus       320 ~~~~~~l~~~~~l~~~~~~~  339 (365)
T cd05279         320 VPKLVALYRQKKFPLDELIT  339 (365)
T ss_pred             HHHHHHHHHcCCcchhHhee
Confidence            99999999999998765554

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=4.7e-43  Score=332.95  Aligned_cols=307  Identities=30%  Similarity=0.467  Sum_probs=262.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--------------CCCcccccceeEEEEEe
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--------------IFPRIFGHEASGIVESV   78 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--------------~~p~~~G~e~~G~V~~v   78 (353)
                      |||+++.++++ ++++++|.|+|+++||+||+.++++|++|++.+.+..              .+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            78999998876 9999999999999999999999999999987654321              26889999999999999


Q ss_pred             CCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCc
Q 018627           79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC  158 (353)
Q Consensus        79 G~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~  158 (353)
                      |++++++++||+|++.+...|++|.+|+.|..+.|.+...  .|.. .                 ..|+|+||+.++.+.
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-----------------~~g~~a~~~~~~~~~  139 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLG-G-----------------GGGGFAEYVVVPAYH  139 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccC-C-----------------CCCceeeEEEechHH
Confidence            9999999999999999999999999999999999986542  1111 0                 025999999999999


Q ss_pred             eEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627          159 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       159 v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      ++++|+++++++++.+ .++.+||+++ +..++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|
T Consensus       140 ~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~g  217 (351)
T cd08233         140 VHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELG  217 (351)
T ss_pred             eEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC
Confidence            9999999999999877 5888999998 7788999999999998999999999999999978999999999999999999


Q ss_pred             CceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEE
Q 018627          239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTL  316 (353)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i  316 (353)
                      ++.+++++  ..++.+.+++.+++ ++|++||++|.+..+..++++++++ |+++.+|......  ++.... +.+++++
T Consensus       218 a~~~i~~~--~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i  292 (351)
T cd08233         218 ATIVLDPT--EVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKPI--SFNPNDLVLKEKTL  292 (351)
T ss_pred             CCEEECCC--ccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCCC--ccCHHHHHhhCcEE
Confidence            99999886  46688888887776 7999999999777889999999997 9999999865333  333333 3568999


Q ss_pred             EeeecCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          317 KGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       317 ~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      .+++...   .++++++++++++|+|++.++++.
T Consensus       293 ~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~  323 (351)
T cd08233         293 TGSICYT---REDFEEVIDLLASGKIDAEPLITS  323 (351)
T ss_pred             EEEeccC---cchHHHHHHHHHcCCCChHHheEE
Confidence            9886443   478999999999999988776653

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=3.7e-43  Score=336.07  Aligned_cols=304  Identities=21%  Similarity=0.307  Sum_probs=245.5

Q ss_pred             EEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627           15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEHV   91 (353)
Q Consensus        15 a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V   91 (353)
                      +++..+..+.+++.+++.|+|+++||+|||.+++||++|++.+.|.+   .+|.++|||++|+|+++|+++++|++||||
T Consensus         9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV   88 (375)
T PLN02178          9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV   88 (375)
T ss_pred             EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence            55555655569999999999999999999999999999999988754   458999999999999999999999999999


Q ss_pred             Eeeccc-CCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627           92 LTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK  170 (353)
Q Consensus        92 ~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~  170 (353)
                      +..+.. .|+.|.+|++|+++.|++......+.. ..|             ....|+|+||+.+|++.++++|+++++++
T Consensus        89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~~  154 (375)
T PLN02178         89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRS-SDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSDS  154 (375)
T ss_pred             EEcCccCCCCCChhHhCcchhcCCCccccccccc-cCC-------------CcCCCccccEEEEchHHeEECCCCCCHHH
Confidence            866554 699999999999999998643211100 001             00125999999999999999999999999


Q ss_pred             hhhhchhhhHHHHHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-hHHHHHhCCCceEeCCCCC
Q 018627          171 ICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       171 aa~l~~~~~ta~~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~G~~~~~~~~~~  248 (353)
                      ++.+.+.+.|+|+++..... .++|++|||.|+|++|++++|+|+++|+ +|++++.+++ +.+.++++|+++++++.+ 
T Consensus       155 aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~-  232 (375)
T PLN02178        155 GAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD-  232 (375)
T ss_pred             cchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC-
Confidence            99999999999998754432 3689999999999999999999999999 7888876654 477888999999887652 


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~  327 (353)
                       .   +.+++.++ ++|++|||+|.+..+..++++++++ |+++.+|.......+  +...+ ++++++.|++.+.   .
T Consensus       233 -~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~--~~~~~~~~~~~i~g~~~~~---~  301 (375)
T PLN02178        233 -S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKPLDL--PIFPLVLGRKMVGGSQIGG---M  301 (375)
T ss_pred             -H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCCCcc--CHHHHHhCCeEEEEeCccC---H
Confidence             1   34444443 6999999999876789999999997 999999976443233  33333 5689999887654   3


Q ss_pred             CcHHHHHHHHHcCCCCCC
Q 018627          328 TDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~~  345 (353)
                      +++.++++++++|++++.
T Consensus       302 ~~~~~~~~l~~~g~i~~~  319 (375)
T PLN02178        302 KETQEMLEFCAKHKIVSD  319 (375)
T ss_pred             HHHHHHHHHHHhCCCccc
Confidence            679999999999999763

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=2.8e-42  Score=324.89  Aligned_cols=291  Identities=22%  Similarity=0.303  Sum_probs=243.6

Q ss_pred             EEEEecCC----CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           15 AAVAWGAG----QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        15 a~~~~~~~----~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      |+++.+++    ..++++++|.|+|+++||+|||.++++|++|++.+.|.+   .+|.++|||++|+|+++|+++++|++
T Consensus         1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV   80 (329)
T ss_pred             CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence            35555555    348999999999999999999999999999999988864   34789999999999999999999999


Q ss_pred             CCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           88 GEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        88 Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      ||||+..+. ..|+.|.+|+.|.++.|+....  .|.. .                  .|+|+||+.+|+..++++|+++
T Consensus        81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-~------------------~G~~aey~~v~~~~~~~lP~~~  139 (329)
T TIGR02822        81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWD-T------------------DGGYAEYTTVPAAFAYRLPTGY  139 (329)
T ss_pred             CCEEEEcCccCcCCCChHHhCcCcccCCCccc--CCcc-c------------------CCcceeEEEeccccEEECCCCC
Confidence            999987654 4799999999999999987553  2222 1                  2599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++++.+++.+.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|++.++++|+++++++.
T Consensus       140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~  217 (329)
T TIGR02822       140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY  217 (329)
T ss_pred             CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence            9999999999999999998 45789999999999999999999999999999 799999999999999999999988753


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~  325 (353)
                      +  ..         .+++|+++++.+....+..+++.++++ |+++.+|..... ..++.... +++++++.+++...  
T Consensus       218 ~--~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~--  282 (329)
T TIGR02822       218 D--TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSNT--  282 (329)
T ss_pred             c--cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecCC--
Confidence            1  10         136899999888778899999999997 999999975332 12233333 35688898876433  


Q ss_pred             CCCcHHHHHHHHHcCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~  344 (353)
                       ++++.++++++++|++++
T Consensus       283 -~~~~~~~~~l~~~g~i~~  300 (329)
T TIGR02822       283 -RADAREFLELAAQHGVRV  300 (329)
T ss_pred             -HHHHHHHHHHHHhCCCee
Confidence             467899999999999863

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=1.3e-41  Score=324.29  Aligned_cols=318  Identities=25%  Similarity=0.360  Sum_probs=263.2

Q ss_pred             eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCC------
Q 018627           14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE------   84 (353)
Q Consensus        14 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~------   84 (353)
                      ||+++.++++.++++++|.|+|+++||+|||.++++|++|+..+.|..   .+|.++|||++|+|+++|+++.+      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            789999988779999999999999999999999999999998887754   46789999999999999999976      


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC-ceEECC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVS  163 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-~v~~iP  163 (353)
                      |++||+|++.+...|+.|.+|+.+..+.|.+..+...+.+  ++.            ....|+|+||++++++ .++++|
T Consensus        82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~--~~~------------~~~~g~~a~~~~v~~~~~~~~lP  147 (361)
T cd08231          82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEAS--CDD------------PHLSGGYAEHIYLPPGTAIVRVP  147 (361)
T ss_pred             cCCCCEEEEcccCCCCCChhHhCcCccccccchhcccccc--ccC------------CCCCcccceEEEecCCCceEECC
Confidence            9999999999999999999999999999988754221111  000            0013699999999986 799999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      +++++++++.+++++.|||+++.+....++|++|||+|+|++|++++++|+++|+++|+++++++++.+.++++|++.++
T Consensus       148 ~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi  227 (361)
T cd08231         148 DNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATI  227 (361)
T ss_pred             CCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEE
Confidence            99999999999889999999997666667999999998899999999999999997899999999999999999999888


Q ss_pred             CCCCCC-ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeee
Q 018627          244 NPNDNN-EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL  320 (353)
Q Consensus       244 ~~~~~~-~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  320 (353)
                      ++.... .++...+++.+++ ++|++|||+|+...+..+++.++++ |+++.+|........++.... +.+++++.+++
T Consensus       228 ~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (361)
T cd08231         228 DIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVH  306 (361)
T ss_pred             cCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcc
Confidence            775311 1233567777766 8999999998867789999999997 999999976543333444433 34689998886


Q ss_pred             cCCCCCCCcHHHHHHHHHcC--CCCCCCCcc
Q 018627          321 FGGWKPKTDLPSLVNRYLKK--VRNTRKPSC  349 (353)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~g--~i~~~~li~  349 (353)
                      .+.   .+++.++++++.++  ++++.++++
T Consensus       307 ~~~---~~~~~~~~~~~~~~~~~~~~~~~i~  334 (361)
T cd08231         307 NYD---PSHLYRAVRFLERTQDRFPFAELVT  334 (361)
T ss_pred             cCC---chhHHHHHHHHHhccCcCCchhhee
Confidence            543   46899999999998  666666665

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=8.2e-42  Score=325.25  Aligned_cols=306  Identities=22%  Similarity=0.296  Sum_probs=249.8

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      .++|+++++++.++++++++.|+|+++||+|||.++++|++|++.+.|..   .+|.++|||++|+|+++|+++++|++|
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~G   88 (357)
T PLN02514          9 KTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVG   88 (357)
T ss_pred             eEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccCC
Confidence            58999999999999999999999999999999999999999999887754   468899999999999999999999999


Q ss_pred             CeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           89 EHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        89 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      |+|+..+. ..|++|..|+.|.++.|....+...+.. ..|             ....|+|+||+.+|...++++|++++
T Consensus        89 d~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~iP~~~~  154 (357)
T PLN02514         89 DIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG-------------KPTQGGFASAMVVDQKFVVKIPEGMA  154 (357)
T ss_pred             CEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCC-------------ccCCCccccEEEEchHHeEECCCCCC
Confidence            99986543 4799999999999999987643211100 001             00126999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHH-HHhCCCceEeCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTEFLNPN  246 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~G~~~~~~~~  246 (353)
                      +++++.+++.+.|||+++.+....++|+++||+|+|++|++++|+|+++|+ +++++.+++++.+. ++++|++.+++..
T Consensus       155 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~  233 (357)
T PLN02514        155 PEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSS  233 (357)
T ss_pred             HHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCC
Confidence            999999999999999998665566899999999889999999999999999 77777777766654 4679998877654


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~  325 (353)
                        +.   +.+.+.+ .++|++|||+|....+..++++++++ |+++.+|......  ++.... +++++++.|++.+.  
T Consensus       234 --~~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~~~~~i~g~~~~~--  302 (357)
T PLN02514        234 --DA---AEMQEAA-DSLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTPL--QFVTPMLMLGRKVITGSFIGS--  302 (357)
T ss_pred             --Ch---HHHHHhc-CCCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCCC--cccHHHHhhCCcEEEEEecCC--
Confidence              21   2344433 36999999999767889999999997 9999999875432  333332 35699999987654  


Q ss_pred             CCCcHHHHHHHHHcCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~  344 (353)
                       ..+++++++++++|++++
T Consensus       303 -~~~~~~~~~~~~~g~l~~  320 (357)
T PLN02514        303 -MKETEEMLEFCKEKGLTS  320 (357)
T ss_pred             -HHHHHHHHHHHHhCCCcC
Confidence             357999999999998753

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=1.2e-41  Score=324.98  Aligned_cols=331  Identities=34%  Similarity=0.617  Sum_probs=267.1

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      ++|||+++.+++.++++++.+.|+++++||+|||.++++|++|++.+.+.+  .+|.++|||++|+|+++|+++.++++|
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~G   80 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPG   80 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCC
Confidence            479999999877779999999999999999999999999999999887754  567899999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCcccccccc-CCccc-cccCccceeeeEEEeCCceEECCCC
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIK-GKPVY-HYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~-~~~~~-~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      |+|++.+. .|+.|..|+.++.++|.+..... .|.. .+|......+ |.+.. +....|+|++|++++++.++++|++
T Consensus        81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~  158 (365)
T cd08278          81 DHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD  158 (365)
T ss_pred             CEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence            99999765 89999999999999998765321 1111 1110000000 00000 0012369999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +++++++.+++++.+|+.++.+...++++++|||+|+|++|++++|+|+++|++.++++++++++.+.++++|++.++++
T Consensus       159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~  238 (365)
T cd08278         159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP  238 (365)
T ss_pred             CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence            99999999999999999998888889999999999889999999999999999779999999999999999999988887


Q ss_pred             CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCC
Q 018627          246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGW  324 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~  324 (353)
                      .  ..++.+.+.+.++.++|+++||+|.+..+..+++.++++ |+++.+|.........++...+ .+++++.++.....
T Consensus       239 ~--~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (365)
T cd08278         239 K--EEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS  315 (365)
T ss_pred             C--CcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence            6  456777777777449999999999777889999999997 9999999763222334444444 56888887765444


Q ss_pred             CCCCcHHHHHHHHHcCCCCCCC
Q 018627          325 KPKTDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~~~  346 (353)
                      ...+.+.++++++++|++++.+
T Consensus       316 ~~~~~~~~~~~~l~~g~l~~~~  337 (365)
T cd08278         316 VPQEFIPRLIELYRQGKFPFDK  337 (365)
T ss_pred             ChHHHHHHHHHHHHcCCCChHH
Confidence            3345678999999999986533

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.5e-42  Score=326.79  Aligned_cols=292  Identities=18%  Similarity=0.187  Sum_probs=232.2

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-------CCCcccccceeEEEEEeCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-------~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      ..++++++++++ ++++++|.|+ +++||||||+++|||++|++.+.|.+       .+|.++|||++|+|+++|.+  +
T Consensus         2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            467899999987 9999999995 99999999999999999999998863       35899999999999998764  6


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||++.+...|. |..|  +..+.|.+..+.  |.. .                  .|+|+||+.+|++.++++|+
T Consensus        78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~vP~  133 (341)
T cd08237          78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR--SSG-Y------------------DGFMQDYVFLPPDRLVKLPD  133 (341)
T ss_pred             cCCCCEEEECCCCCch-hccc--chhccCCCccee--Eec-C------------------CCceEEEEEEchHHeEECCC
Confidence            9999999998877776 4455  356778765432  111 1                  25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHH--hccCCCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~--~~~~~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      ++++++|+.+. +++++++++..  ...+++|++|||+|+|++|++++|++++ +|..+|++++++++|++.+++++++.
T Consensus       134 ~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~  212 (341)
T cd08237         134 NVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETY  212 (341)
T ss_pred             CCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCcee
Confidence            99999887665 88999998754  2456889999999999999999999986 56558999999999999998866543


Q ss_pred             EeCCCCCCccHHHHHHHHhcC-CccEEEeccCC---hHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEE
Q 018627          242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGD---TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTL  316 (353)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i  316 (353)
                      .++      ++       ..+ ++|+|||++|+   +..+..++++++++ |+++++|......  ++.... +.+++++
T Consensus       213 ~~~------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~--~~~~~~~~~k~~~i  276 (341)
T cd08237         213 LID------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYPV--PINTRMVLEKGLTL  276 (341)
T ss_pred             ehh------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCCc--ccCHHHHhhCceEE
Confidence            221      11       122 69999999994   46789999999997 9999999764432  333333 3579999


Q ss_pred             EeeecCCCCCCCcHHHHHHHHHcC---CCCCCCCccCC
Q 018627          317 KGSLFGGWKPKTDLPSLVNRYLKK---VRNTRKPSCGN  351 (353)
Q Consensus       317 ~g~~~~~~~~~~~~~~~~~~l~~g---~i~~~~li~~~  351 (353)
                      .|+..+.   .++++++++++.+|   +.+++++|++.
T Consensus       277 ~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~  311 (341)
T cd08237         277 VGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGV  311 (341)
T ss_pred             EEecccC---HHHHHHHHHHHHhCCcccCChHHHhccc
Confidence            9886432   46799999999999   44677787764

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=7.3e-42  Score=294.31  Aligned_cols=285  Identities=25%  Similarity=0.275  Sum_probs=248.1

Q ss_pred             CCccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCC
Q 018627            7 QPQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPG   81 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~   81 (353)
                      ...|...+.+++++.|..  +++++.|.|+|.|+|++||..++|+|..|...+.|.+   +.|+++|-|++|+|+++|.+
T Consensus         3 ~~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~g   82 (336)
T KOG1197|consen    3 AASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEG   82 (336)
T ss_pred             CCCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCC
Confidence            456778899999988766  9999999999999999999999999999999999988   67899999999999999999


Q ss_pred             CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627           82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (353)
Q Consensus        82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~  161 (353)
                      ++++++||||+...                                                .+|.|+|+..+|...+++
T Consensus        83 vtdrkvGDrVayl~------------------------------------------------~~g~yaee~~vP~~kv~~  114 (336)
T KOG1197|consen   83 VTDRKVGDRVAYLN------------------------------------------------PFGAYAEEVTVPSVKVFK  114 (336)
T ss_pred             ccccccccEEEEec------------------------------------------------cchhhheeccccceeecc
Confidence            99999999998762                                                246999999999999999


Q ss_pred             CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc
Q 018627          162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT  240 (353)
Q Consensus       162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~  240 (353)
                      +|+.+++.+||++...+.|||.-+++..++++|++||||.+ |++|++++|++++.|+ ++|++.+..+|.+.+++.|++
T Consensus       115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~  193 (336)
T KOG1197|consen  115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE  193 (336)
T ss_pred             CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence            99999999999999999999999999999999999999975 9999999999999999 999999999999999999999


Q ss_pred             eEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEE-E
Q 018627          241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTL-K  317 (353)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i-~  317 (353)
                      +.++++  .+++.+.+++.+++ |+|+++|.+|. +.+...+.+|++. |.+|.+|+..+..+ +++...+ -+++++ +
T Consensus       194 h~I~y~--~eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~-p~~l~~ls~k~l~lvr  268 (336)
T KOG1197|consen  194 HPIDYS--TEDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLID-PIPLNQLSPKALQLVR  268 (336)
T ss_pred             ceeecc--chhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCC-CeehhhcChhhhhhcc
Confidence            999998  78999999999988 99999999998 7789999999997 99999998766321 2222222 235553 4


Q ss_pred             eeecCCCCCCCcHH----HHHHHHHcCCCCCC
Q 018627          318 GSLFGGWKPKTDLP----SLVNRYLKKVRNTR  345 (353)
Q Consensus       318 g~~~~~~~~~~~~~----~~~~~l~~g~i~~~  345 (353)
                      .+.++....+++|.    ++..++.+|+|+++
T Consensus       269 psl~gYi~g~~el~~~v~rl~alvnsg~lk~~  300 (336)
T KOG1197|consen  269 PSLLGYIDGEVELVSYVARLFALVNSGHLKIH  300 (336)
T ss_pred             HhhhcccCCHHHHHHHHHHHHHHhhcCcccee
Confidence            45555544444444    78888889988754

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=1.3e-40  Score=317.76  Aligned_cols=332  Identities=38%  Similarity=0.681  Sum_probs=270.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH   90 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~   90 (353)
                      |||+++.+++.+++++++|.|+++++||+||+.++++|++|+..+.+..  .+|.++|+|++|+|+++|+++..+++||+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDH   80 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCCCCCccccccceEEEEEeCCCccccCCCCE
Confidence            7899999998889999999999999999999999999999999887754  56779999999999999999999999999


Q ss_pred             EEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627           91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK  170 (353)
Q Consensus        91 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~  170 (353)
                      |++.+...|++|++|++++.+.|++..+.-.|.. .++..++-..|...+.....|+|++|+.++++.++++|+++++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~  159 (363)
T cd08279          81 VVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR  159 (363)
T ss_pred             EEECCCCCCCCChhhcCCCcccCccccccccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence            9999999999999999999999987643211111 010000000111222222347999999999999999999999999


Q ss_pred             hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      ++.+++.+.+||.++.+..++.++++|||+|+|.+|++++++|++.|+.+|+++.+++++.+.++++|++++++.+  ..
T Consensus       160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~--~~  237 (363)
T cd08279         160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS--ED  237 (363)
T ss_pred             eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC--Cc
Confidence            9999999999999988888899999999997799999999999999995599999999999999999998888876  45


Q ss_pred             cHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCCCC
Q 018627          251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKPKT  328 (353)
Q Consensus       251 ~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~  328 (353)
                      ++...++.+..+ ++|+++|++++...+...+++++++ |+++.+|.........+....+. ++..+.++.++.....+
T Consensus       238 ~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (363)
T cd08279         238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRR  316 (363)
T ss_pred             cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHH
Confidence            677778777655 8999999999767889999999997 99999987653233334444443 57777887665544567


Q ss_pred             cHHHHHHHHHcCCCCCCCCc
Q 018627          329 DLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       329 ~~~~~~~~l~~g~i~~~~li  348 (353)
                      .+++++++++++++++.+++
T Consensus       317 ~~~~~~~l~~~g~l~~~~~~  336 (363)
T cd08279         317 DIPRLLDLYRAGRLKLDELV  336 (363)
T ss_pred             HHHHHHHHHHcCCCCcceeE
Confidence            89999999999999876543

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.2e-40  Score=316.50  Aligned_cols=312  Identities=25%  Similarity=0.332  Sum_probs=259.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.+++. +++++.|.|.+.++||+|||.++++|++|++.+.+..   .+|.++|||++|+|+++|+++.++++||
T Consensus         1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            78999999886 8999999999999999999999999999998876654   5578999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP  167 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~  167 (353)
                      +|++.+..+|+.|..|..|+++.|.+..   .|+. . +             ....|+|+||+.++.+  .++++|++++
T Consensus        80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~---~~~~-~-~-------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~  141 (351)
T cd08285          80 RVIVPAITPDWRSVAAQRGYPSQSGGML---GGWK-F-S-------------NFKDGVFAEYFHVNDADANLAPLPDGLT  141 (351)
T ss_pred             EEEEcCcCCCCCCHHHHCcCcccCcCCC---CCcc-c-c-------------CCCCcceeEEEEcchhhCceEECCCCCC
Confidence            9999888899999999999999998742   1111 0 0             0012599999999974  8999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      +++++.++..+.||++++ +...+++|++|||+|+|++|++++|+|+++|+..++++++++++.+.++++|++.++++. 
T Consensus       142 ~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~-  219 (351)
T cd08285         142 DEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK-  219 (351)
T ss_pred             HHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC-
Confidence            999999988999999996 678899999999998899999999999999997799999999999999999999998876 


Q ss_pred             CCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh---hcCcEEEeeecCC
Q 018627          248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF---LSGRTLKGSLFGG  323 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~~  323 (353)
                       ..++.+.+..+..+ ++|++|||+|++..+..++++++++ |+++.+|.......+.+....+   ++...+.+.....
T Consensus       220 -~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  297 (351)
T cd08285         220 -NGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG  297 (351)
T ss_pred             -CCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecCC
Confidence             45677777777665 8999999999877889999999997 9999999766433333332111   3355665543221


Q ss_pred             CCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          324 WKPKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                        .+++++++++++++|+|++.++++
T Consensus       298 --~~~~~~~~~~~~~~g~i~~~~~~~  321 (351)
T cd08285         298 --GRLRMERLASLIEYGRVDPSKLLT  321 (351)
T ss_pred             --ccccHHHHHHHHHcCCCChhhcee
Confidence              247899999999999999855543

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=5.2e-40  Score=309.95  Aligned_cols=299  Identities=23%  Similarity=0.381  Sum_probs=254.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.+++++++++++|.|+++++||+||+.++++|++|+..+.|..   .+|.++|||++|+|+++|+++.++++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            7899999996679999999999999999999999999999999887753   5677999999999999999999999999


Q ss_pred             eEEeec-ccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627           90 HVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL  168 (353)
Q Consensus        90 ~V~~~~-~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~  168 (353)
                      +|++.+ ...|+.|.+|..|+++.|.....  .|.. .                  .|+|++|+.++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~--~~~~-~------------------~g~~a~~~~v~~~~~~~lp~~~~~  139 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVT-R------------------DGGYAEYMLAPAEALARIPDDLDA  139 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCc--cCcc-c------------------CCcceeEEEEchhheEeCCCCCCH
Confidence            998855 45799999999999999987543  2221 1                  258999999999999999999999


Q ss_pred             hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      ++++.+++.+.++|+++.. ..+.++++|||+|+|++|++++++|+++|+ +|+++++++++.+.++++|+++++++.  
T Consensus       140 ~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~--  215 (333)
T cd08296         140 AEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTS--  215 (333)
T ss_pred             HHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCC--
Confidence            9999999999999999854 589999999999999999999999999999 899999999999999999999888876  


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~  327 (353)
                      ..++.+.+++.  +++|+++|++|.+..+..++++++++ |+++.+|....  .+++....+ .+++++.++..+.   .
T Consensus       216 ~~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~  287 (333)
T cd08296         216 KEDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT---A  287 (333)
T ss_pred             CccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---H
Confidence            44566666654  36999999997667889999999997 99999998653  233343333 5699999886443   3


Q ss_pred             CcHHHHHHHHHcCCCCC
Q 018627          328 TDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~  344 (353)
                      +++.++++++..+++++
T Consensus       288 ~~~~~~~~~~~~~~l~~  304 (333)
T cd08296         288 LDSEDTLKFSALHGVRP  304 (333)
T ss_pred             HHHHHHHHHHHhCCCCc
Confidence            57888999998887754

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=7.4e-40  Score=309.40  Aligned_cols=300  Identities=28%  Similarity=0.405  Sum_probs=259.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+++.++++.+.+.|++.+++|+||+.++++|++|+..+.+.+      .+|.++|+|++|+|+++|+++..++
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            6899999887779999999999999999999999999999998877654      3468999999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++.+...|+.|..|+.|..++|++..+...+   .                  .|+|++|+.++.+.++++|+++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------~g~~~~~~~v~~~~~~~~P~~l  139 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIG---T------------------DGGFAEYLLVPSRRLVKLPRGL  139 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCcc---C------------------CCcceeeEEecHHHeEECCCCC
Confidence            999999999999999999999999999988864332   1                  2599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHh-ccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++++++.++..+.|||+++.+. ..+.++++|||+|+|++|++++++|+.+| . +|+++.+++++.+.++++|++++++
T Consensus       140 s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~  218 (340)
T cd05284         140 DPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLN  218 (340)
T ss_pred             CHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEc
Confidence            9999999999999999998665 46888999999999779999999999999 6 8888989999999999999999888


Q ss_pred             CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecC
Q 018627          245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG  322 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  322 (353)
                      ++  .. +.+.++++.++ ++|+++|++|+......++++++++ |+++.+|.... ..  +.... +.+++++.++...
T Consensus       219 ~~--~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~-~~--~~~~~~~~~~~~~~~~~~~  291 (340)
T cd05284         219 AS--DD-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH-GR--LPTSDLVPTEISVIGSLWG  291 (340)
T ss_pred             CC--cc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-Cc--cCHHHhhhcceEEEEEecc
Confidence            76  33 77788877766 8999999999767889999999997 99999997653 22  22222 3568888877543


Q ss_pred             CCCCCCcHHHHHHHHHcCCCCC
Q 018627          323 GWKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      .   .+.+.++++++++|++++
T Consensus       292 ~---~~~~~~~~~~l~~g~l~~  310 (340)
T cd05284         292 T---RAELVEVVALAESGKVKV  310 (340)
T ss_pred             c---HHHHHHHHHHHHhCCCCc
Confidence            2   467899999999998864

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=7.2e-40  Score=309.45  Aligned_cols=302  Identities=22%  Similarity=0.323  Sum_probs=250.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.+++. ++++++|.|+|+++||+||+.++++|++|++.+.+..   ++|.++|||++|+|+++|+++..+++||
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            68999998876 9999999999999999999999999999999887764   3588999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      +|+..+...|+.|..|..+++++|.+....  +.. .                  .|+|+||++++.+.++++|++++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~~~~~~~~~~~ip~~~~~~  138 (339)
T PRK10083         80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL--GVH-R------------------DGGFSEYAVVPAKNAHRIPDAIADQ  138 (339)
T ss_pred             EEEEccccCCCCCccccCcCcccCCCCceE--EEc-c------------------CCcceeeEEechHHeEECcCCCCHH
Confidence            999999999999999999999999765431  111 1                  2589999999999999999999998


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      +++ +..++.+++. +.+..++++|++|||+|+|++|++++|+|++ +|++.++++++++++.++++++|++.+++++  
T Consensus       139 ~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~--  214 (339)
T PRK10083        139 YAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNA--  214 (339)
T ss_pred             HHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCc--
Confidence            876 4457888886 4477889999999999999999999999997 5997788899999999999999999998876  


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~  327 (353)
                      +.++.+.+... +..+|++||++|.+..+..++++++++ |+++.+|......  .+....+ .+++++.+...    ..
T Consensus       215 ~~~~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~~~~~~~----~~  286 (339)
T PRK10083        215 QEPLGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPS--EIVQQGITGKELSIFSSRL----NA  286 (339)
T ss_pred             cccHHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCc--eecHHHHhhcceEEEEEec----Ch
Confidence            34566655431 115679999999777889999999997 9999999764322  2222222 35777776543    24


Q ss_pred             CcHHHHHHHHHcCCCCCCCCc
Q 018627          328 TDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~~~li  348 (353)
                      +++.++++++.+|++++.+++
T Consensus       287 ~~~~~~~~~~~~g~l~~~~~~  307 (339)
T PRK10083        287 NKFPVVIDWLSKGLIDPEKLI  307 (339)
T ss_pred             hhHHHHHHHHHcCCCChHHhe
Confidence            679999999999999876544

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-39  Score=309.16  Aligned_cols=306  Identities=26%  Similarity=0.341  Sum_probs=256.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------------CCCcccccceeEEEEEeCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------------IFPRIFGHEASGIVESVGP   80 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------------~~p~~~G~e~~G~V~~vG~   80 (353)
                      |||+++++++. ++++++|.|++.++||+||+.++++|++|+..+.|..            .+|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            68999998876 9999999999999999999999999999998877642            3577899999999999999


Q ss_pred             CCC--CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC-
Q 018627           81 GVT--EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-  157 (353)
Q Consensus        81 ~~~--~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-  157 (353)
                      ++.  ++++||+|++.+..+|+.|..|..|..++|....  ..|.. .                ...|+|++|+.++++ 
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~-~----------------~~~g~~~~~~~~~~~~  140 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHD--LYGFQ-N----------------NVNGGMAEYMRFPKEA  140 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCcc--ceeec-c----------------CCCCcceeeEEccccc
Confidence            998  8999999999999999999999999999997543  22321 0                012599999999988 


Q ss_pred             ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      .++++|+++++++++.+ .++.++|+++ +..++++|++|||.|+|++|++++++|+++|+..++++++++++.+.++++
T Consensus       141 ~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~  218 (350)
T cd08256         141 IVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKF  218 (350)
T ss_pred             ceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHc
Confidence            57899999999999988 7999999997 778899999999977799999999999999986788999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEE
Q 018627          238 GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL  316 (353)
Q Consensus       238 G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i  316 (353)
                      |++.++++.  ..++.+.+.+++++ ++|++||++|.+..+..++++++++ |+++.+|.......+.+......+++++
T Consensus       219 g~~~v~~~~--~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i  295 (350)
T cd08256         219 GADVVLNPP--EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELDV  295 (350)
T ss_pred             CCcEEecCC--CcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccEE
Confidence            998888775  45677778877776 8999999999766788899999997 9999998765433333222212357778


Q ss_pred             EeeecCCCCCCCcHHHHHHHHHcCCCCCCCC
Q 018627          317 KGSLFGGWKPKTDLPSLVNRYLKKVRNTRKP  347 (353)
Q Consensus       317 ~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~l  347 (353)
                      .++....    ..+.++++++++|.+++.++
T Consensus       296 ~~~~~~~----~~~~~~~~~~~~g~l~~~~~  322 (350)
T cd08256         296 LGSHLGP----YCYPIAIDLIASGRLPTDGI  322 (350)
T ss_pred             EEeccCc----hhHHHHHHHHHcCCCChhHh
Confidence            7776443    46889999999999987643

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=9.5e-40  Score=316.51  Aligned_cols=302  Identities=19%  Similarity=0.246  Sum_probs=240.5

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhh-ccCC---------CCCcccccceeEEEEEeCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA---------IFPRIFGHEASGIVESVGP   80 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~-~g~~---------~~p~~~G~e~~G~V~~vG~   80 (353)
                      |.|+|++++++++ ++++++|.|+|+++||+|||.++|||++|++.+ .|..         .+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            3689999999986 999999999999999999999999999999876 3431         3678999999999999999


Q ss_pred             CCC-CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--
Q 018627           81 GVT-EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--  157 (353)
Q Consensus        81 ~~~-~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--  157 (353)
                      +++ +|++||||++.+...|+.|..|. +            .|.. .                  .|+|+||+++|++  
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~-~------------------~G~~aey~~v~~~~~  127 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYT-Y------------------PGGLATYHIIPNEVM  127 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCC-C------------cccc-C------------------CCcceEEEEecHHhc
Confidence            998 69999999999888898888773 1            0111 1                  2599999999987  


Q ss_pred             --ceEECCCCCChhhhhhhchhhh---HHHHHH--------HHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCC--CCeE
Q 018627          158 --CAVKVSSIAPLEKICLLSCGLS---AGLGAA--------WNVADISKGSTVVIFGL-GTVGLSVAQGAKARG--ASRI  221 (353)
Q Consensus       158 --~v~~iP~~l~~~~aa~l~~~~~---ta~~al--------~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g--~~~v  221 (353)
                        .++++|+++++++++.+. +++   +++.++        .+.+++++|++|+|+|+ |++|++++|+|+++|  +.+|
T Consensus       128 ~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V  206 (410)
T cd08238         128 EQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL  206 (410)
T ss_pred             cCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence              589999999999988652 222   233332        24567899999999985 999999999999975  4579


Q ss_pred             EEEcCChhhHHHHHhC--------CCc-eEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceE
Q 018627          222 IGVDTNPEKCEKAKAF--------GVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLA  291 (353)
Q Consensus       222 i~~~~~~~~~~~~~~~--------G~~-~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~  291 (353)
                      ++++++++|++.++++        |++ .++++.+ ..++.+.+++++++ ++|++||++|.+..+..++++++++ |++
T Consensus       207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~  284 (410)
T cd08238         207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL  284 (410)
T ss_pred             EEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence            9999999999999997        766 4566542 24677788888777 8999999999878899999999997 988


Q ss_pred             EEEcCCC-CCCceecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627          292 VTLGVPK-LKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCGN  351 (353)
Q Consensus       292 v~~g~~~-~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~~  351 (353)
                      +.++... .....+++...+ +++++++|+..+.   +++++++++++.+|++++.++|++.
T Consensus       285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~  343 (410)
T cd08238         285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHI  343 (410)
T ss_pred             EEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEE
Confidence            7765432 211233443333 5699999986543   4689999999999999999888763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=2e-39  Score=307.17  Aligned_cols=308  Identities=30%  Similarity=0.416  Sum_probs=258.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |||+++.+++. +++.+.|.|.| .++||+||+.++++|++|+..+.+.+   ++|.++|+|++|+|+++|++++++++|
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG   79 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence            68999988877 89999999999 99999999999999999998887754   567899999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCC
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA  166 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l  166 (353)
                      |+|++.+...|+.|.+|+.|++.+|++......+...                  ..|+|++|++++++  .++++|+++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~g~~~~~~~v~~~~~~~~~lP~~~  141 (347)
T cd05278          80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNR------------------IDGGQAEYVRVPYADMNLAKIPDGL  141 (347)
T ss_pred             CEEEecCCCCCCCChhHhCcCcccCcCCCcccccccC------------------CCCeeeEEEEecchhCeEEECCCCC
Confidence            9999999999999999999999999886532211000                  12599999999987  899999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++++.++..+.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|+.+++++++++++.+.++++|++.++++.
T Consensus       142 ~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~  220 (347)
T cd05278         142 PDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK  220 (347)
T ss_pred             CHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCC
Confidence            9999999999999999997 678899999999988899999999999999965788888889999999999999988876


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                        ..++.+.++..+++ ++|++||++++...+..++++++++ |+++.+|..............+.+++++.++....  
T Consensus       221 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  295 (347)
T cd05278         221 --NGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV--  295 (347)
T ss_pred             --cchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc--
Confidence              45677778777665 8999999998756789999999997 99999986544221112222234677777654332  


Q ss_pred             CCCcHHHHHHHHHcCCCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~~~  346 (353)
                       .+.+.++++++.++++++.+
T Consensus       296 -~~~~~~~~~~~~~~~l~~~~  315 (347)
T cd05278         296 -RARMPELLDLIEEGKIDPSK  315 (347)
T ss_pred             -hhHHHHHHHHHHcCCCChhH
Confidence             46799999999999988654

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=7.8e-40  Score=305.52  Aligned_cols=276  Identities=21%  Similarity=0.259  Sum_probs=219.3

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecc-hhhhhhhccCC------CCCcccccceeEEEEEeCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLC-RSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~-~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +|||+++.+++. ++++++|.|+|+++||||||.+++|| ++|++.+.|.+      .+|.++|||++|+|+++|+++ +
T Consensus         1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            478999998876 99999999999999999999999996 79998887754      358999999999999999998 6


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||+..    |..|..|..+                 .                  .|+|+||+.+|++.++++|+
T Consensus        79 ~~vGdrV~~~----~~~c~~~~~~-----------------~------------------~G~~aey~~v~~~~~~~ip~  119 (308)
T TIGR01202        79 FRPGDRVFVP----GSNCYEDVRG-----------------L------------------FGGASKRLVTPASRVCRLDP  119 (308)
T ss_pred             CCCCCEEEEe----Cccccccccc-----------------c------------------CCcccceEEcCHHHceeCCC
Confidence            9999999874    2223221110                 1                  15999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      +++++. +.+. .+.|||+++.+ . ..+++++||+|+|++|++++|+|+++|++.|++++.++++++.++++   .+++
T Consensus       120 ~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~  192 (308)
T TIGR01202       120 ALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLD  192 (308)
T ss_pred             CCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccC
Confidence            999864 5554 67899999844 3 34689999999999999999999999996677888888887766553   3344


Q ss_pred             CCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627          245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW  324 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  324 (353)
                      +.  + .        .+.++|++|||+|++..++.++++++++ |+++++|.......+++... +.+++++.++.... 
T Consensus       193 ~~--~-~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~~~~~i~~~~~~~-  258 (308)
T TIGR01202       193 PE--K-D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVPA-FMKEARLRIAAEWQ-  258 (308)
T ss_pred             hh--h-c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccchh-hhcceEEEEecccc-
Confidence            32  1 0        1238999999999877889999999997 99999998654334443333 35688888775432 


Q ss_pred             CCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627          325 KPKTDLPSLVNRYLKKVRNTRKPSCGN  351 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~~~li~~~  351 (353)
                        .++++++++++++|++++++++++.
T Consensus       259 --~~~~~~~~~l~~~g~i~~~~~it~~  283 (308)
T TIGR01202       259 --PGDLHAVRELIESGALSLDGLITHQ  283 (308)
T ss_pred             --hhHHHHHHHHHHcCCCChhhcccee
Confidence              4689999999999999999998764

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=8.2e-39  Score=305.40  Aligned_cols=307  Identities=25%  Similarity=0.382  Sum_probs=249.4

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC------CCCCcccccceeEEEEEeCCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      .|++.|+..+.. +++++.+.|.++++||+||+.++++|++|++.+.+.      ..+|.++|||++|+|+++|+++.+|
T Consensus        17 ~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   95 (364)
T PLN02702         17 ENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHL   95 (364)
T ss_pred             ccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCC
Confidence            466677677655 999999999999999999999999999999887652      1357899999999999999999999


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||+|++.+..+|++|..|+.|.++.|++..+.  +....                  .|+|++|+.++.+.++++|++
T Consensus        96 ~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~~~------------------~g~~~~y~~v~~~~~~~~P~~  155 (364)
T PLN02702         96 VVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF--ATPPV------------------HGSLANQVVHPADLCFKLPEN  155 (364)
T ss_pred             CCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc--CCCCC------------------CCcccceEEcchHHeEECCCC
Confidence            9999999999999999999999999999874321  11101                  259999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +++.+++... +++++++++ +..++.+|++|||+|+|++|++++++|+++|++.|+++++++++.+.++++|++.++++
T Consensus       156 l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  233 (364)
T PLN02702        156 VSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLV  233 (364)
T ss_pred             CCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEec
Confidence            9999987633 566688887 77889999999999889999999999999999778899999999999999999988765


Q ss_pred             CCCCccHHHHHHHH---hcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchh-hhhcCcEEEeeec
Q 018627          246 NDNNEPVQQVIKRI---TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLF  321 (353)
Q Consensus       246 ~~~~~~~~~~~~~~---~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~  321 (353)
                      .....++.+.+..+   .++++|++||++|++..+..++++++++ |+++.+|.....  ..+... ..++++++.+++.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~  310 (364)
T PLN02702        234 STNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVGVFR  310 (364)
T ss_pred             CcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEEecc
Confidence            43245566666544   2348999999999777899999999996 999999975332  222222 2356888888753


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~~~li  348 (353)
                      .    ..++..++++++++++++++++
T Consensus       311 ~----~~~~~~~~~~~~~~~l~~~~~~  333 (364)
T PLN02702        311 Y----RNTWPLCLEFLRSGKIDVKPLI  333 (364)
T ss_pred             C----hHHHHHHHHHHHcCCCCchHhe
Confidence            2    3578899999999998765544

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=8.6e-39  Score=307.58  Aligned_cols=323  Identities=28%  Similarity=0.366  Sum_probs=259.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |+|+++.++++ ++++++|.|.|. +++|+||+.++++|++|+..+.|.+   ++|.++|||++|+|+++|++++++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            78999988765 999999999984 9999999999999999999988865   458899999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccc--cccccCCccccccccCCc-cccccCccceeeeEEEeCC--ceEECC
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER--RGVMHSDQQTRFSIKGKP-VYHYCAVSSFSEYTVVHSG--CAVKVS  163 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~--~g~~~~~g~~~~~~~~~~-~~~~~~~g~~a~~~~~~~~--~v~~iP  163 (353)
                      |+|++.+...|++|.+|+.+..+.|.+.....  ++.++..   ..++.|.. .++ ...|+|+||++++++  .++++|
T Consensus        80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~lp  155 (386)
T cd08283          80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA---GAGIFGYSHLTG-GYAGGQAEYVRVPFADVGPFKIP  155 (386)
T ss_pred             CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccc---cccccccccccC-CCCCeeEEEEEcccccCeEEECC
Confidence            99999999999999999999999998764321  1111000   00000000 000 013699999999987  899999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      +++++++++.++..++|||+++ +..++.+|++|||+|+|++|++++++|++.|+.+|+++++++++.+.+++++...++
T Consensus       156 ~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi  234 (386)
T cd08283         156 DDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI  234 (386)
T ss_pred             CCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence            9999999999999999999998 778999999999998899999999999999986699999999999999998544677


Q ss_pred             CCCCCCc-cHHHHHHHHhcC-CccEEEeccCC---------------------hHHHHHHHHHhccCCceEEEEcCCCCC
Q 018627          244 NPNDNNE-PVQQVIKRITDG-GADYSFECIGD---------------------TGMITTALQSCCDGWGLAVTLGVPKLK  300 (353)
Q Consensus       244 ~~~~~~~-~~~~~~~~~~~~-~~dvv~d~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g~~~~~  300 (353)
                      ++.  .. ++.+.++.++++ ++|++||++|+                     ...+..++++++++ |+++.+|.....
T Consensus       235 ~~~--~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~  311 (386)
T cd08283         235 NFE--EVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT  311 (386)
T ss_pred             cCC--cchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC
Confidence            665  33 477788877776 89999999975                     23678899999997 999999976542


Q ss_pred             Cceecch-hhhhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627          301 PEVAAHY-GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       301 ~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li  348 (353)
                       ...+.. ..+.+++++.++...   ..+.+.++++++.++++.+.+++
T Consensus       312 -~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~  356 (386)
T cd08283         312 -VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFII  356 (386)
T ss_pred             -cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHce
Confidence             223333 224568888876432   24679999999999999876554

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=5.3e-39  Score=304.99  Aligned_cols=306  Identities=25%  Similarity=0.363  Sum_probs=260.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---------------CCCcccccceeEEEEE
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---------------IFPRIFGHEASGIVES   77 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---------------~~p~~~G~e~~G~V~~   77 (353)
                      |||+++..++.+++++++|.|+++++||+||+.++++|++|+..+.+.+               .+|.++|+|++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            7899999888889999999999999999999999999999998876642               2467899999999999


Q ss_pred             eCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC
Q 018627           78 VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG  157 (353)
Q Consensus        78 vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~  157 (353)
                      +|+++.++++||+|++++...|+.|..|.++.+++|......  |..                   ..|+|++|+.++.+
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~  139 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL--GIF-------------------QDGGYAEYVIVPHS  139 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce--eee-------------------ccCcceeeEEecHH
Confidence            999999999999999999999999999999999999665321  211                   12589999999999


Q ss_pred             ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      .++++|+++++.+++.+.+.+.+||+++.+...+.++++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++
T Consensus       140 ~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~  219 (350)
T cd08240         140 RYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA  219 (350)
T ss_pred             HeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence            99999999999999999999999999987766677899999998899999999999999997889998999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEE
Q 018627          238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK  317 (353)
Q Consensus       238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~  317 (353)
                      |++.+++.+  +..+.+.+.+..++++|++||++|.+..+..++++++++ |+++.+|........++... .++++++.
T Consensus       220 g~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i~  295 (350)
T cd08240         220 GADVVVNGS--DPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTIQ  295 (350)
T ss_pred             CCcEEecCC--CccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEEE
Confidence            998887765  445666677665558999999999767899999999997 99999987655333333333 34788888


Q ss_pred             eeecCCCCCCCcHHHHHHHHHcCCCCCCC
Q 018627          318 GSLFGGWKPKTDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       318 g~~~~~~~~~~~~~~~~~~l~~g~i~~~~  346 (353)
                      ++....   .+++.+++++++++.+++.+
T Consensus       296 ~~~~~~---~~~~~~~~~ll~~~~i~~~~  321 (350)
T cd08240         296 GSYVGS---LEELRELVALAKAGKLKPIP  321 (350)
T ss_pred             EcccCC---HHHHHHHHHHHHcCCCccce
Confidence            776543   36789999999999887543

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.6e-38  Score=299.66  Aligned_cols=308  Identities=28%  Similarity=0.426  Sum_probs=261.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++..++.++.+++.|.|.+.+++|+||+.++++|++|+..+.|..   .+|.++|+|++|+|+.+|+++..+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            7899998888789999999999999999999999999999998887764   3478999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP  167 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~  167 (353)
                      +|++.+...|++|.+|+.|..+.|..+..  .|..                   ..|+|++|+.+++.  .++++|++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~~iP~~~~  139 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFT-------------------HPGSFAEYVAVPRADVNLVRLPDDVD  139 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCcc--cccC-------------------CCCcceeEEEcccccCceEECCCCCC
Confidence            99987778899999999999999998642  2221                   12589999999974  8999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      +++++.++.++.+||+++.+..++.++++|||+|+|++|++++++|++.|+ +|+++.+++++.+.++++|++.+++++.
T Consensus       140 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~  218 (345)
T cd08260         140 FVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE  218 (345)
T ss_pred             HHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc
Confidence            999999999999999998777889999999999999999999999999999 8999989999999999999999988762


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCc-eecchhhh-hcCcEEEeeecCCCC
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLF-LSGRTLKGSLFGGWK  325 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~~~  325 (353)
                       +.++.+.+..+..+++|++|||+|+...+...+++++++ |+++.+|....... ..+....+ .+++++.++...   
T Consensus       219 -~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  293 (345)
T cd08260         219 -VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM---  293 (345)
T ss_pred             -chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---
Confidence             256777777766558999999998767788999999997 99999997654322 23333333 457888876543   


Q ss_pred             CCCcHHHHHHHHHcCCCCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNTRKP  347 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~~~l  347 (353)
                      ..+.+.+++++++++++.+.++
T Consensus       294 ~~~~~~~~~~l~~~~~i~~~~~  315 (345)
T cd08260         294 PAHRYDAMLALIASGKLDPEPL  315 (345)
T ss_pred             CHHHHHHHHHHHHcCCCChhhh
Confidence            2467999999999999886553

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=3.5e-39  Score=297.20  Aligned_cols=263  Identities=24%  Similarity=0.319  Sum_probs=215.9

Q ss_pred             ccccceeEEEEEeCCCCC------CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCcc
Q 018627           66 IFGHEASGIVESVGPGVT------EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPV  139 (353)
Q Consensus        66 ~~G~e~~G~V~~vG~~~~------~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~  139 (353)
                      ++|||++|+|+++|++++      +|++||||++.+...|+.|.+|+.|+++.|++....  |....++           
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~-----------   67 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY--GHEALDS-----------   67 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc--CcccccC-----------
Confidence            589999999999999998      899999999999999999999999999999876542  2110000           


Q ss_pred             ccccCccceeeeEEEeCC-ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC
Q 018627          140 YHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA  218 (353)
Q Consensus       140 ~~~~~~g~~a~~~~~~~~-~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~  218 (353)
                       +....|+|+||+.+|++ .++++|+++++++++.+++.+.|+|+++. .....+|++|||+|+|++|++++|+|+++|+
T Consensus        68 -~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~  145 (280)
T TIGR03366        68 -GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGAGMLGLTAAAAAAAAGA  145 (280)
T ss_pred             -CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence             00012599999999997 69999999999999999999999999974 4566699999999999999999999999999


Q ss_pred             CeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          219 SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       219 ~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ++|++++++++|++.++++|++.++++.  +  ..+.+++.+++ ++|++||++|.+..+..++++++++ |+++.+|..
T Consensus       146 ~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~--~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~  220 (280)
T TIGR03366       146 ARVVAADPSPDRRELALSFGATALAEPE--V--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSV  220 (280)
T ss_pred             CEEEEECCCHHHHHHHHHcCCcEecCch--h--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccC
Confidence            6699999999999999999999888764  2  24556666665 8999999999888899999999997 999999975


Q ss_pred             CCCCceecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHc--CCCCCCCCccCC
Q 018627          298 KLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLK--KVRNTRKPSCGN  351 (353)
Q Consensus       298 ~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~--g~i~~~~li~~~  351 (353)
                      ......++++..+ .+++++.|+..+.   .++++++++++.+  ++++++++|+++
T Consensus       221 ~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~  274 (280)
T TIGR03366       221 FPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKP  274 (280)
T ss_pred             CCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcc
Confidence            4323334444444 5699999886433   4689999999998  478888999875

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.2e-38  Score=300.08  Aligned_cols=306  Identities=27%  Similarity=0.395  Sum_probs=258.5

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |||+++.+++. ++++++|.|+| +++||+||++++++|++|+..+.|.+   .+|.++|||++|+|+++|+++.++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            68999988886 99999999996 89999999999999999999887764   347899999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCC
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA  166 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l  166 (353)
                      |+|++.+...|+.|.+|..+.++.|....+. .|.. .                  .|+|++|+.++.+  .++++|+++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~------------------~g~~~~~~~v~~~~~~~~~lp~~~  139 (345)
T cd08286          80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNL-I------------------DGTQAEYVRIPHADNSLYKLPEGV  139 (345)
T ss_pred             CEEEECCcCCCCCChHHHCcCcccCCCcccc-cccc-c------------------CCeeeeEEEcccccCceEECCCCC
Confidence            9999999999999999999999999876441 1211 1                  2589999999987  899999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++.+++.+...+++||.++....++.+|++|||.|+|.+|++++|+|+.+|+.+|+++++++++.+.++++|++.++++.
T Consensus       140 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~  219 (345)
T cd08286         140 DEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA  219 (345)
T ss_pred             CHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccc
Confidence            99999999999999999877778899999999998899999999999999944888999999999999999999888876


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGW  324 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~  324 (353)
                        ..++.+.+.+..++ ++|++|||+|....+..+++.++++ |+++.+|.....  .++.+.. +.+++++.+....  
T Consensus       220 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~--  292 (345)
T cd08286         220 --KGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD--  292 (345)
T ss_pred             --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc--
Confidence              45577777776665 8999999998777788999999997 999999975433  3334443 3468888765322  


Q ss_pred             CCCCcHHHHHHHHHcCCCCCCCCc
Q 018627          325 KPKTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~~~li  348 (353)
                        .+.+.+++++++++.+++.+++
T Consensus       293 --~~~~~~~~~~~~~~~l~~~~~~  314 (345)
T cd08286         293 --TNTTPMLLKLVSSGKLDPSKLV  314 (345)
T ss_pred             --hhhHHHHHHHHHcCCCChHHcE
Confidence              2568889999999998876654

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=2e-38  Score=305.79  Aligned_cols=309  Identities=20%  Similarity=0.228  Sum_probs=253.4

Q ss_pred             ccceeeEEEEec--CC---CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-------------CCCcccccc
Q 018627            9 QVITCKAAVAWG--AG---QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFPRIFGHE   70 (353)
Q Consensus         9 ~~~~~~a~~~~~--~~---~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-------------~~p~~~G~e   70 (353)
                      +|.+|+|+++..  .+   +.++++++|.|.++++||+||+.++++|++|++.+.+..             .++.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            677899999853  22   238899999999999999999999999999988776541             123589999


Q ss_pred             eeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceee
Q 018627           71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE  150 (353)
Q Consensus        71 ~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~  150 (353)
                      ++|+|+++|++++.+++||+|++.+...|+.|..|..+..++|.+...  .|....                  .|+|++
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~~~------------------~g~~a~  148 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYETN------------------YGSFAQ  148 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--ccccCC------------------CCccee
Confidence            999999999999999999999999999999999999999999976532  222111                  259999


Q ss_pred             eEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHh--ccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV--ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       151 ~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~--~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      |++++...++++|+++++++++.+.+++.|||+++...  +++++|++|||+|+ |++|++++++|+++|+ ++++++++
T Consensus       149 y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s  227 (393)
T cd08246         149 FALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSS  227 (393)
T ss_pred             EEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCC
Confidence            99999999999999999999999999999999998654  67899999999997 9999999999999999 77788899


Q ss_pred             hhhHHHHHhCCCceEeCCCCC--------------------CccHHHHHHHHhcC--CccEEEeccCChHHHHHHHHHhc
Q 018627          228 PEKCEKAKAFGVTEFLNPNDN--------------------NEPVQQVIKRITDG--GADYSFECIGDTGMITTALQSCC  285 (353)
Q Consensus       228 ~~~~~~~~~~G~~~~~~~~~~--------------------~~~~~~~~~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~  285 (353)
                      +++.+.++++|++.++++++.                    ...+.+.+.+++++  ++|++|||+|. ..+..++++++
T Consensus       228 ~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l~  306 (393)
T cd08246         228 EEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVCD  306 (393)
T ss_pred             HHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHhc
Confidence            999999999999998886421                    01355667777765  69999999997 66888999999


Q ss_pred             cCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627          286 DGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       286 ~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      ++ |+++.+|..... ...+....+ .++.++.+++...   .+++.+++++++++++.+
T Consensus       307 ~~-G~~v~~g~~~~~-~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~  361 (393)
T cd08246         307 RG-GMVVICAGTTGY-NHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP  361 (393)
T ss_pred             cC-CEEEEEcccCCC-CCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee
Confidence            96 999999875432 122222223 4588888876554   357889999999998874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.4e-38  Score=298.78  Aligned_cols=330  Identities=34%  Similarity=0.497  Sum_probs=263.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCC---CCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE---FNE   87 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~---~~v   87 (353)
                      |||+++.+++.++++++.|.|.++++||+||+.++++|++|+..+.+..  .+|.++|||++|+|+.+|+++.+   +++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~   80 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSV   80 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCCCCCcccccccceEEEEeCCCCCCCCcCCC
Confidence            6899999988779999999999999999999999999999998887754  56789999999999999999888   999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCccccccc-ccccccCCcccc-ccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTR-FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~g~~~-~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ||+|++.+...|+.|..|.-++.++|++.... ..+.-+-+|... +.-.+.+.+- ...|+|++|+.++.+.++++|++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~P~~  159 (367)
T cd08263          81 GDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPLPES  159 (367)
T ss_pred             CCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCcccc-ccCCcceeEEEechhhEEECCCC
Confidence            99999988889999999999999999976411 100000000000 0000000000 01369999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +++.+++.++..+.|||+++.+...+.++++|||+|+|++|++++++|+.+|+.+++++++++++.+.++++|++.++++
T Consensus       160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~  239 (367)
T cd08263         160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA  239 (367)
T ss_pred             CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence            99999999999999999998777788999999999879999999999999999559999899999999999999999887


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  323 (353)
                      +  ..++.+.++...++ ++|++||++++......++++++++ |+++.+|.........+....+ .+++++.++... 
T Consensus       240 ~--~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  315 (367)
T cd08263         240 A--KEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA-  315 (367)
T ss_pred             C--cccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC-
Confidence            6  45677778777665 8999999999854788999999997 9999998764422333444444 468888775322 


Q ss_pred             CCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627          324 WKPKTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i~~~~li  348 (353)
                       ...+.+.++++++.++++++.+++
T Consensus       316 -~~~~~~~~~~~ll~~~~l~~~~~~  339 (367)
T cd08263         316 -RPRQDLPELVGLAASGKLDPEALV  339 (367)
T ss_pred             -CcHHHHHHHHHHHHcCCCCcccce
Confidence             224678999999999999876544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=7.8e-38  Score=295.95  Aligned_cols=302  Identities=25%  Similarity=0.340  Sum_probs=247.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC------CCCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      ||++++.+++..+++.++|.|.|.++||+||++++++|++|+..+.+.      ..+|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            689999888888999999999999999999999999999999865442      14678999999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++.+..+|..|..|+.+.+++|+...+  .+.. .                  .|+|++|+.++.+.++++|+++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~iP~~l  139 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG--VGVN-R------------------PGAFAEYLVIPAFNVWKIPDDI  139 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCcce--eeec-C------------------CCcceeeEEechHHeEECcCCC
Confidence            99999999999999999999999999976532  2221 1                  2599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++++.+ ..+.++++++..  ...+|++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++|++.+++++
T Consensus       140 ~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~  216 (341)
T PRK05396        140 PDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA  216 (341)
T ss_pred             CHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence            99988755 466777666532  346899999988899999999999999996688888899999999999999988876


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                        ..++.+.+++++++ ++|++|||+|....+..++++++++ |+++.+|.......+.+ ...+++++++.++..... 
T Consensus       217 --~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~-  291 (341)
T PRK05396        217 --KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGREM-  291 (341)
T ss_pred             --cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccCc-
Confidence              45677788777765 9999999999877889999999997 99999997654334332 222356888877653221 


Q ss_pred             CCCcHHHHHHHHHcCCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~~  345 (353)
                       .+.+..+++++.++ +.+.
T Consensus       292 -~~~~~~~~~~~~~~-~~~~  309 (341)
T PRK05396        292 -FETWYKMSALLQSG-LDLS  309 (341)
T ss_pred             -cchHHHHHHHHHcC-CChh
Confidence             34566788888888 4333

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.2e-37  Score=294.87  Aligned_cols=308  Identities=27%  Similarity=0.367  Sum_probs=253.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |+|+++..++ .++++++|.|.|. ++||+||+.++++|+.|+..+.+.+  .+|.++|+|++|+|+++|+++.++++||
T Consensus         1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (344)
T cd08284           1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD   79 (344)
T ss_pred             CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCCcccccceEEEEEeeCCCccccCCCC
Confidence            6799988775 4999999999985 9999999999999999998887754  4578999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP  167 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~  167 (353)
                      +|++.+..+|+.|.+|+.++.++|+.....+..     +.            ....|+|++|++++++  .++++|++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------~~~~g~~~~~~~v~~~~~~~~~~p~~l~  142 (344)
T cd08284          80 RVVSPFTIACGECFYCRRGQSGRCAKGGLFGYA-----GS------------PNLDGAQAEYVRVPFADGTLLKLPDGLS  142 (344)
T ss_pred             EEEEcccCCCCCChHHhCcCcccCCCCcccccc-----cc------------CCCCCceeEEEEcccccCceEECCCCCC
Confidence            999999899999999999999999875432110     00            0012599999999864  9999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      +++++.+++.++|||+++. ..++.+|++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|+. .++++ 
T Consensus       143 ~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~-  219 (344)
T cd08284         143 DEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFE-  219 (344)
T ss_pred             HHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecC-
Confidence            9999999999999999984 47889999999998899999999999999975789998899999999999975 34444 


Q ss_pred             CCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCC
Q 018627          248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK  325 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~  325 (353)
                       ..++...+.+++++ ++|++||+++++..+..++++++++ |+++.+|..... ........ +.+++++.+..   ..
T Consensus       220 -~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~---~~  293 (344)
T cd08284         220 -DAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR---CP  293 (344)
T ss_pred             -CcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---CC
Confidence             35677778877776 8999999999877889999999996 999999976532 22222222 34688876542   22


Q ss_pred             CCCcHHHHHHHHHcCCCCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNTRKP  347 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~~~l  347 (353)
                      ..+.+.++++++.++++++.++
T Consensus       294 ~~~~~~~~~~~~~~~~i~~~~~  315 (344)
T cd08284         294 VRSLFPELLPLLESGRLDLEFL  315 (344)
T ss_pred             cchhHHHHHHHHHcCCCChHHh
Confidence            3578999999999999986543

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.6e-37  Score=287.30  Aligned_cols=297  Identities=28%  Similarity=0.433  Sum_probs=249.0

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |||++..+++ +.+++++++.|.+.++||+|||.++++|++|...+.+.+   ..|.++|+|++|+|+.+|++++.+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   80 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG   80 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence            5789988765 349999999999999999999999999999998877754   457899999999999999999999999


Q ss_pred             CeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           89 EHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        89 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      |+|++.+. ..|+.|.+|+.+..+.|+....  .|..                   ..|+|++|++++.+.++++|++++
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~lp~~~~  139 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG--IGTQ-------------------ADGGFAEYVLVPEESLHELPENLS  139 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCce--eeec-------------------CCCceEEEEEcchHHeEECcCCCC
Confidence            99999875 6899999999999999976421  1211                   125999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +++++ +...+.++|+++....+++++++|||.|+|.+|++++++|+++|+ +|+.+  .+++++.++++++|++++ ++
T Consensus       140 ~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~  216 (306)
T cd08258         140 LEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NG  216 (306)
T ss_pred             HHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CC
Confidence            99887 555888999998888889999999998779999999999999999 77776  345668888899999877 76


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  323 (353)
                      .  ..++.+.+....++ ++|+++|++|+...+...++.++++ |+++.+|.... ....+....+ ++++++.|++.+.
T Consensus       217 ~--~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~  292 (306)
T cd08258         217 G--EEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSST  292 (306)
T ss_pred             C--cCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecCc
Confidence            5  56777788777665 8999999998767888999999997 99999998652 2233333333 5799999998765


Q ss_pred             CCCCCcHHHHHHHHHcC
Q 018627          324 WKPKTDLPSLVNRYLKK  340 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g  340 (353)
                         ++|++++++++++|
T Consensus       293 ---~~~~~~~~~~~~~~  306 (306)
T cd08258         293 ---PASWETALRLLASG  306 (306)
T ss_pred             ---hHhHHHHHHHHhcC
Confidence               57899999999876

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.2e-37  Score=293.21  Aligned_cols=305  Identities=31%  Similarity=0.449  Sum_probs=251.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.+++. +++.+.|.|.| +++||+||+.++++|++|+..+.|..  .+|.++|||++|+|+++|+++.++++||
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (345)
T cd08287           1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGD   79 (345)
T ss_pred             CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCCCCCcccccceEEEEEEeCCCCCccCCCC
Confidence            78999988776 99999999996 89999999999999999998887764  3478999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP  167 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~  167 (353)
                      +|++.....|+.|..|..|+.++|.+..+  .+.. .+                  |+|+||+.++.+  .++++|++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lP~~l~  138 (345)
T cd08287          80 FVIAPFAISDGTCPFCRAGFTTSCVHGGF--WGAF-VD------------------GGQGEYVRVPLADGTLVKVPGSPS  138 (345)
T ss_pred             EEEeccccCCCCChhhhCcCcccCCCCCc--ccCC-CC------------------CceEEEEEcchhhCceEECCCCCC
Confidence            99986667799999999999999986543  1211 22                  499999999974  9999999998


Q ss_pred             hhhhh-----hhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          168 LEKIC-----LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       168 ~~~aa-----~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      ++++.     .+...+.+|++++ ...++.+|++|+|.|+|++|++++|+|+++|++.++++++++++.+.++++|++.+
T Consensus       139 ~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v  217 (345)
T cd08287         139 DDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDI  217 (345)
T ss_pred             hhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceE
Confidence            83221     2235788999987 46789999999998889999999999999999668999999999999999999999


Q ss_pred             eCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecch-hhhhcCcEEEeee
Q 018627          243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSL  320 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~  320 (353)
                      +++.  ...+.+.+.+.+++ ++|+++|++|++..+..++++++++ |+++.+|.....  ..+.. ..+.+++++.+..
T Consensus       218 ~~~~--~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~  292 (345)
T cd08287         218 VAER--GEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG--VELDVRELFFRNVGLAGGP  292 (345)
T ss_pred             ecCC--cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCCC--CccCHHHHHhcceEEEEec
Confidence            8886  45677778877766 8999999998877899999999997 999999876532  23333 3356699888754


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627          321 FGGWKPKTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~g~i~~~~li  348 (353)
                      ...   .+.+.++++++.++++++.+++
T Consensus       293 ~~~---~~~~~~~~~~~~~~~l~~~~~~  317 (345)
T cd08287         293 APV---RRYLPELLDDVLAGRINPGRVF  317 (345)
T ss_pred             CCc---HHHHHHHHHHHHcCCCCHHHhE
Confidence            322   4679999999999999875543

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=4.4e-37  Score=290.78  Aligned_cols=303  Identities=29%  Similarity=0.412  Sum_probs=254.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.+++. +.+++.+.|++.+++|+||+.++++|+.|+..+.+..   .+|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd   79 (343)
T cd08235           1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD   79 (343)
T ss_pred             CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence            68999988875 9999999999999999999999999999999887754   4578999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCc-----eEECCC
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC-----AVKVSS  164 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-----v~~iP~  164 (353)
                      +|++.+...|++|..|..|+.++|.+....  |.. .                  .|+|++|+.++++.     ++++|+
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~v~v~~~~~~~~~~~~lP~  138 (343)
T cd08235          80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF--GNL-Y------------------DGGFAEYVRVPAWAVKRGGVLKLPD  138 (343)
T ss_pred             EEEEccCCCCCCChHHHCcCcccCCCccee--ccC-C------------------CCcceeeEEecccccccccEEECCC
Confidence            999999999999999999999999886542  211 1                  25899999999988     999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++++++++.+ .++.+||+++.. .++++|++|||+|+|.+|++++|+|++.|++.|+++.+++++.+.++++|++.+++
T Consensus       139 ~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~  216 (343)
T cd08235         139 NVSFEEAALV-EPLACCINAQRK-AGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTID  216 (343)
T ss_pred             CCCHHHHHhh-hHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEec
Confidence            9999999877 688999999854 58999999999988999999999999999944899989999999999999988888


Q ss_pred             CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecC
Q 018627          245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG  322 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  322 (353)
                      ++  +.++.+.++...++ ++|++|||++....+...+++++++ |+++.+|.........+....+ ++++.+.++...
T Consensus       217 ~~--~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  293 (343)
T cd08235         217 AA--EEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA  293 (343)
T ss_pred             CC--ccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC
Confidence            76  56677788777766 8999999999766888999999996 9999998654422233332222 457777665533


Q ss_pred             CCCCCCcHHHHHHHHHcCCCCCC
Q 018627          323 GWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      .   .+.+.+++++++++++.+.
T Consensus       294 ~---~~~~~~~~~l~~~~~l~~~  313 (343)
T cd08235         294 S---PEDYKEALELIASGKIDVK  313 (343)
T ss_pred             C---hhhHHHHHHHHHcCCCChH
Confidence            2   4678899999999998753

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-37  Score=289.82  Aligned_cols=292  Identities=24%  Similarity=0.320  Sum_probs=241.2

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCCCCCCeEE
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVL   92 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~   92 (353)
                      |||+++.++++ ++++++|.|+++++||+||++++++|++|...+.|.++.|.++|||++|+|+++|++   +++||||.
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~   76 (319)
T cd08242           1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFPGVPGHEFVGIVEEGPEA---ELVGKRVV   76 (319)
T ss_pred             CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCCCCCccCceEEEEEEEeCCC---CCCCCeEE
Confidence            68999988764 999999999999999999999999999999988887677889999999999999987   68999999


Q ss_pred             eecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhh
Q 018627           93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC  172 (353)
Q Consensus        93 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa  172 (353)
                      ..+..+|+.|.+|..|.++.|.+....  +....                  .|+|++|++++++.++++|+++++++++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~~~~aa  136 (319)
T cd08242          77 GEINIACGRCEYCRRGLYTHCPNRTVL--GIVDR------------------DGAFAEYLTLPLENLHVVPDLVPDEQAV  136 (319)
T ss_pred             ECCCcCCCCChhhhCcCcccCCCCccc--CccCC------------------CCceEEEEEechHHeEECcCCCCHHHhh
Confidence            999999999999999999999886532  11101                  2589999999999999999999999888


Q ss_pred             hhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccH
Q 018627          173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV  252 (353)
Q Consensus       173 ~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~  252 (353)
                      .+ ..+.+++.++ +..+++++++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.+.++++|++.++++..  .  
T Consensus       137 ~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~--~--  209 (319)
T cd08242         137 FA-EPLAAALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA--E--  209 (319)
T ss_pred             hh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc--c--
Confidence            64 3566676654 77889999999999889999999999999999 6999999999999999999988777641  1  


Q ss_pred             HHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCcHHH
Q 018627          253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPS  332 (353)
Q Consensus       253 ~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  332 (353)
                            ..++++|++|||+|....+..++++++++ |+++..+.......+++.. .+.++.++.++..+      .+++
T Consensus       210 ------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~------~~~~  275 (319)
T cd08242         210 ------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASFDLTK-AVVNEITLVGSRCG------PFAP  275 (319)
T ss_pred             ------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCccCHHH-heecceEEEEEecc------cHHH
Confidence                  12238999999998877789999999997 9999987654433333222 13458888776532      3889


Q ss_pred             HHHHHHcCCCCCCCCcc
Q 018627          333 LVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       333 ~~~~l~~g~i~~~~li~  349 (353)
                      +++++.+++|++.+++.
T Consensus       276 ~~~~~~~~~l~~~~~~~  292 (319)
T cd08242         276 ALRLLRKGLVDVDPLIT  292 (319)
T ss_pred             HHHHHHcCCCChhhceE
Confidence            99999999997665543

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=2.9e-37  Score=295.95  Aligned_cols=317  Identities=26%  Similarity=0.376  Sum_probs=251.4

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      ||++++.+++. ++++++|.|.+ .++||+|||+++++|++|++.+.|..  .+|.++|||++|+|+++|+++..+++||
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (375)
T cd08282           1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGD   79 (375)
T ss_pred             CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCCCCCceeccccEEEEEEeCCCCCcCCCCC
Confidence            67899888774 99999999996 79999999999999999999887764  4588999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCCC
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP  167 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l~  167 (353)
                      +|++.+..+|+.|..|+.++.+.|.+..+.+.+.  ..|     ..+  .  ....|+|+||+.++..  .++++|++++
T Consensus        80 ~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~--~~~-----~~~--~--~~~~g~~a~y~~v~~~~~~~~~lP~~~~  148 (375)
T cd08282          80 RVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGG--AYG-----YVD--M--GPYGGGQAEYLRVPYADFNLLKLPDRDG  148 (375)
T ss_pred             EEEEeCCCCCCCCHHHHCcCcccCCCCCcccccc--ccc-----ccc--c--CCCCCeeeeEEEeecccCcEEECCCCCC
Confidence            9999999999999999999999998643221110  000     000  0  0012599999999976  8999999999


Q ss_pred             hh---hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          168 LE---KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       168 ~~---~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++   +++.+.+++++||+++ +.+++.+|++|||.|+|++|++++|+|+++|+.+|+++++++++.+.++++|+ ..++
T Consensus       149 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~  226 (375)
T cd08282         149 AKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPID  226 (375)
T ss_pred             hhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eEec
Confidence            98   5677888999999998 77889999999998889999999999999998678889999999999999998 4556


Q ss_pred             CCCCCccHHHHHHHHhcCCccEEEeccCChH-----------HHHHHHHHhccCCceEEEEcCCCCC-C----------c
Q 018627          245 PNDNNEPVQQVIKRITDGGADYSFECIGDTG-----------MITTALQSCCDGWGLAVTLGVPKLK-P----------E  302 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~-~----------~  302 (353)
                      +.  +.++.+.+.+++++++|++|||+|...           .+..++++++++ |+++.+|..... .          .
T Consensus       227 ~~--~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~  303 (375)
T cd08282         227 FS--DGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGE  303 (375)
T ss_pred             cC--cccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCcc
Confidence            55  456777777766668999999998742           478999999997 999988864321 0          1


Q ss_pred             eecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          303 VAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       303 ~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      ..+....+ .++..+.+....   ..+.+..++++++++++++.++++
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~  348 (375)
T cd08282         304 LSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVS  348 (375)
T ss_pred             ccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEE
Confidence            22232323 346666655322   246788999999999998765443

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3e-37  Score=296.70  Aligned_cols=307  Identities=28%  Similarity=0.411  Sum_probs=247.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC----------CCCCcccccceeEEEEEeCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----------AIFPRIFGHEASGIVESVGPGV   82 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~----------~~~p~~~G~e~~G~V~~vG~~~   82 (353)
                      +.+.++.. . .++++++|.|+++++||+||++++++|++|++.+.+.          ..+|.++|||++|+|+++|+++
T Consensus        29 ~~~~~~~~-~-~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v  106 (384)
T cd08265          29 LGSKVWRY-P-ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNV  106 (384)
T ss_pred             ceeEEEeC-C-CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCC
Confidence            34444443 3 4999999999999999999999999999999877521          1357899999999999999999


Q ss_pred             CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEEC
Q 018627           83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  162 (353)
Q Consensus        83 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i  162 (353)
                      ..|++||+|++.+..+|+.|..|..|++++|.....  .|.. .                  .|+|++|+.++++.++++
T Consensus       107 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~-~------------------~g~~~~~v~v~~~~~~~l  165 (384)
T cd08265         107 KNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE--LGFS-A------------------DGAFAEYIAVNARYAWEI  165 (384)
T ss_pred             CCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--eeec-C------------------CCcceeeEEechHHeEEC
Confidence            999999999999999999999999999999986553  2211 1                  258999999999999999


Q ss_pred             CCCC-------ChhhhhhhchhhhHHHHHHHHh-ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627          163 SSIA-------PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       163 P~~l-------~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~  234 (353)
                      |+++       +++ ++.+..++++||+++... .++++|++|||+|+|++|++++++|+++|+.+|+++++++++.+.+
T Consensus       166 P~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~  244 (384)
T cd08265         166 NELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA  244 (384)
T ss_pred             CccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence            9863       445 555666899999998665 6899999999998899999999999999987799999999999999


Q ss_pred             HhCCCceEeCCCCC-CccHHHHHHHHhcC-CccEEEeccCCh-HHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-
Q 018627          235 KAFGVTEFLNPNDN-NEPVQQVIKRITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-  310 (353)
Q Consensus       235 ~~~G~~~~~~~~~~-~~~~~~~~~~~~~~-~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-  310 (353)
                      +++|+++++++++. ..++.+.+++++++ ++|+++|++|.+ ..+..++++++++ |+++.+|......  ++....+ 
T Consensus       245 ~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~  321 (384)
T cd08265         245 KEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATTV--PLHLEVLQ  321 (384)
T ss_pred             HHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCCC--cccHHHHh
Confidence            99999988887532 22677788888776 899999999863 4678889999996 9999999654322  2232322 


Q ss_pred             hcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627          311 LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       311 ~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li  348 (353)
                      +++.++.++....  ....+.+++++++++++++.+++
T Consensus       322 ~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~  357 (384)
T cd08265         322 VRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKII  357 (384)
T ss_pred             hCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHhe
Confidence            3466777765322  23569999999999999876544

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=293.04  Aligned_cols=296  Identities=27%  Similarity=0.388  Sum_probs=249.5

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |+|+++.+++++++++++|.|.++++||+||+.++++|++|+..+.+..   ++|.++|||++|+|+.+|+++..+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            7899999999889999999999999999999999999999998877643   5578999999999999999998899999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      +|++.+...|+.|++|..+.++.|......  |..                   ..|+|++|+.++.+.++++|+++++.
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~  139 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY--GEE-------------------LDGFFAEYAKVKVTSLVKVPPNVSDE  139 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCcccccc--ccc-------------------cCceeeeeeecchhceEECCCCCCHH
Confidence            999998899999999999999999886542  211                   12589999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      +++.+.+.+.++|+++.+. ++.++++|||+|+ |.+|++++++|+++|+ +++++.+++++.+.++++ ++.++++.  
T Consensus       140 ~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~--  214 (334)
T PRK13771        140 GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS--  214 (334)
T ss_pred             HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch--
Confidence            9999999999999998554 8999999999998 8999999999999999 888888999999998888 66666542  


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCc--eecchhhhhcCcEEEeeecCCCCC
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE--VAAHYGLFLSGRTLKGSLFGGWKP  326 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~  326 (353)
                        .+.+.++++  +++|+++||+|+ ..+..++++++++ |+++.+|.......  ..+... +.+++++.+...   ..
T Consensus       215 --~~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~  284 (334)
T PRK13771        215 --KFSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHIS---AT  284 (334)
T ss_pred             --hHHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecC---CC
Confidence              455556554  379999999997 4678999999997 99999997644222  222333 456888887642   23


Q ss_pred             CCcHHHHHHHHHcCCCCC
Q 018627          327 KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       327 ~~~~~~~~~~l~~g~i~~  344 (353)
                      ++++++++++++++++++
T Consensus       285 ~~~~~~~~~~~~~~~l~~  302 (334)
T PRK13771        285 KRDVEEALKLVAEGKIKP  302 (334)
T ss_pred             HHHHHHHHHHHHcCCCcc
Confidence            578999999999998864

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.7e-37  Score=288.26  Aligned_cols=298  Identities=32%  Similarity=0.501  Sum_probs=251.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.+++. +.+.+.|.|.+.++||+|||.++++|+.|+..+.+..   .+|.++|+|++|+|+.+|+++..+++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            68999988876 9999999999999999999999999999998877654   3478899999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      +|++.+...|+.|..|+.+.++.|.....  .+..                   ..|+|++|++++++ ++++|++++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~v~v~~~-~~~~p~~~~~~  137 (337)
T cd08261          80 RVVVDPYISCGECYACRKGRPNCCENLQV--LGVH-------------------RDGGFAEYIVVPAD-ALLVPEGLSLD  137 (337)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCe--eeec-------------------CCCcceeEEEechh-eEECCCCCCHH
Confidence            99999889999999999999999954322  1111                   12589999999999 99999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN  249 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~  249 (353)
                      +++.+. .+.++++++ +..++.+|++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.+.++++|+++++++.  .
T Consensus       138 ~aa~~~-~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~--~  212 (337)
T cd08261         138 QAALVE-PLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG--D  212 (337)
T ss_pred             Hhhhhc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc--c
Confidence            998874 778888887 77889999999999889999999999999999 899998899999999999999999876  4


Q ss_pred             ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCCC
Q 018627          250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKPK  327 (353)
Q Consensus       250 ~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~  327 (353)
                      .++.+.+.+.+++ ++|++|||+|+...+..++++++++ |+++.+|......  .+....+. +++++.++..   ...
T Consensus       213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~  286 (337)
T cd08261         213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGPV--TFPDPEFHKKELTILGSRN---ATR  286 (337)
T ss_pred             cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCCC--ccCHHHHHhCCCEEEEecc---CCh
Confidence            5677888877766 8999999998777889999999997 9999998765322  23333333 4778776532   234


Q ss_pred             CcHHHHHHHHHcCCCCC
Q 018627          328 TDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~  344 (353)
                      +.+.++++++++|++++
T Consensus       287 ~~~~~~~~l~~~~~i~~  303 (337)
T cd08261         287 EDFPDVIDLLESGKVDP  303 (337)
T ss_pred             hhHHHHHHHHHcCCCCh
Confidence            67899999999999987

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=5.1e-37  Score=289.78  Aligned_cols=301  Identities=27%  Similarity=0.377  Sum_probs=248.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH   90 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~   90 (353)
                      |||+++.+++....+++.|.|+++++||+|||.++++|++|++.+.+..  ..|.++|||++|+|+++|+++..|++||+
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~   80 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRILGHEGIGIVKEVGPGVTSLKVGDR   80 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCCCCccCCcccceEEEEECCCCccCCCCCE
Confidence            7899999887744489999999999999999999999999998887754  34789999999999999999999999999


Q ss_pred             EEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           91 VLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        91 V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      |++.+. ..|+.|..|..+..+.|.....  .|.. .                  .|+|+||+.++.+.++++|++++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~~~  139 (338)
T PRK09422         81 VSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYT-V------------------DGGMAEQCIVTADYAVKVPEGLDPA  139 (338)
T ss_pred             EEEccCCCCCCCChhhcCCCcccCCCccc--cCcc-c------------------cCcceeEEEEchHHeEeCCCCCCHH
Confidence            997554 5799999999999999976542  2222 1                  2599999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      +++.++..+.|||+++ +.+++++|++|||+|+|++|++++++|+. +|+ +|+++.+++++.+.++++|++.++++.. 
T Consensus       140 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-  216 (338)
T PRK09422        140 QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-  216 (338)
T ss_pred             HeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-
Confidence            9999999999999997 77889999999999999999999999998 499 8999999999999999999988888752 


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCC
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~  327 (353)
                      ..++.+.+++..+ ++|.++.+.++...+..++++++.+ |+++.+|.......+  ....+ .++.++.++....   .
T Consensus       217 ~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~  289 (338)
T PRK09422        217 VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESMDL--SIPRLVLDGIEVVGSLVGT---R  289 (338)
T ss_pred             cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCcee--cHHHHhhcCcEEEEecCCC---H
Confidence            2456667776655 6885555555567899999999997 999999976432222  32222 4577777664332   4


Q ss_pred             CcHHHHHHHHHcCCCCC
Q 018627          328 TDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~  344 (353)
                      +++.++++++++|++++
T Consensus       290 ~~~~~~~~l~~~g~l~~  306 (338)
T PRK09422        290 QDLEEAFQFGAEGKVVP  306 (338)
T ss_pred             HHHHHHHHHHHhCCCCc
Confidence            67889999999998864

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=5.6e-37  Score=296.18  Aligned_cols=309  Identities=22%  Similarity=0.291  Sum_probs=250.6

Q ss_pred             ccceeeEEEEec--CC---CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-------------CCC-ccccc
Q 018627            9 QVITCKAAVAWG--AG---QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFP-RIFGH   69 (353)
Q Consensus         9 ~~~~~~a~~~~~--~~---~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-------------~~p-~~~G~   69 (353)
                      +|.+|||+++..  .+   +.+++.++|.|.|+++||+||+.++++|++|.+...+..             ..| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            466899999954  44   349999999999999999999999999999987654421             123 37999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCcccee
Q 018627           70 EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFS  149 (353)
Q Consensus        70 e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a  149 (353)
                      |++|+|+++|+++..+++||+|++.+...|++|..|+.|+.+.|.....  .|..                  ...|+|+
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~------------------~~~g~~a  143 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI--WGYE------------------TNFGSFA  143 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc--cccc------------------CCCccce
Confidence            9999999999999999999999999999999999999999999965431  1211                  0125999


Q ss_pred             eeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHH--hccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       150 ~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~--~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      ||+.++++.++++|+++++++++.+.+.+.+||+++..  ..++.+|++|||+|+ |++|++++++|+++|+ +++++++
T Consensus       144 e~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~  222 (398)
T TIGR01751       144 EFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVS  222 (398)
T ss_pred             EEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcC
Confidence            99999999999999999999999999999999999754  467889999999998 9999999999999999 7788888


Q ss_pred             ChhhHHHHHhCCCceEeCCCCCC--------------------ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhc
Q 018627          227 NPEKCEKAKAFGVTEFLNPNDNN--------------------EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCC  285 (353)
Q Consensus       227 ~~~~~~~~~~~G~~~~~~~~~~~--------------------~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~  285 (353)
                      ++++.+.++++|++.+++++..+                    ..+.+.+.+++++ ++|++|||+|. ..+..++++++
T Consensus       223 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~  301 (398)
T TIGR01751       223 SPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCR  301 (398)
T ss_pred             CHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhc
Confidence            89999999999999998865210                    1245566667765 89999999986 66888999999


Q ss_pred             cCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627          286 DGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       286 ~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      ++ |+++.+|..... ...++... +.++.++.++....   .+++.+++++++++++.+
T Consensus       302 ~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~  356 (398)
T TIGR01751       302 RG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP  356 (398)
T ss_pred             cC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc
Confidence            97 999999976542 12222222 24577777776544   346888999999998874

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=9.7e-37  Score=287.36  Aligned_cols=303  Identities=30%  Similarity=0.460  Sum_probs=255.9

Q ss_pred             eeEEEEecCCCC-eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           13 CKAAVAWGAGQP-LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        13 ~~a~~~~~~~~~-l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      ||++++..++++ +.+++.|.|.+++++|+||+.++++|+.|...+.+..    ++|.++|+|++|+|+.+|+++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~   80 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV   80 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence            789999999987 6888999999999999999999999999998887754    35788999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      ||+|++.+..+|+.|..|..++.+.|......  |.. .                  .|+|++|+.++.+.++++|++++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~  139 (338)
T cd08254          81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP--GLG-I------------------DGGFAEYIVVPARALVPVPDGVP  139 (338)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCcc--ccc-c------------------CCcceeeEEechHHeEECCCCCC
Confidence            99999999999999999999999999655432  211 1                  25899999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      +++++.+..++.+||+++.+..+++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++.. 
T Consensus       140 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~-  217 (338)
T cd08254         140 FAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL-  217 (338)
T ss_pred             HHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC-
Confidence            999999999999999998787889999999998879999999999999999 799999999999999999998888765 


Q ss_pred             CCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCC
Q 018627          248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP  326 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  326 (353)
                       +..+.+.+ ....+ ++|+++||+|....+..++++++++ |+++.+|.......++.. ..+.++.++.+++..   .
T Consensus       218 -~~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---~  290 (338)
T cd08254         218 -DDSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLS-DLIARELRIIGSFGG---T  290 (338)
T ss_pred             -CcCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCHH-HHhhCccEEEEeccC---C
Confidence             34555555 44444 8999999998777889999999997 999999875443333322 223458888876533   2


Q ss_pred             CCcHHHHHHHHHcCCCCCC
Q 018627          327 KTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       327 ~~~~~~~~~~l~~g~i~~~  345 (353)
                      .+.+..++++++++.|.+.
T Consensus       291 ~~~~~~~~~ll~~~~l~~~  309 (338)
T cd08254         291 PEDLPEVLDLIAKGKLDPQ  309 (338)
T ss_pred             HHHHHHHHHHHHcCCCccc
Confidence            4678899999999998764

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.1e-36  Score=288.06  Aligned_cols=305  Identities=29%  Similarity=0.461  Sum_probs=253.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH   90 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~   90 (353)
                      |||+++.+.++ +++++.|.|+++++||+||+.++++|+.|+..+.+.+  .+|.++|+|++|+|+.+|+++..|++||+
T Consensus         1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~   79 (343)
T cd08236           1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDR   79 (343)
T ss_pred             CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCCCCCcccCcceEEEEEEECCCCCcCCCCCE
Confidence            68999988876 9999999999999999999999999999998776643  45789999999999999999999999999


Q ss_pred             EEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627           91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK  170 (353)
Q Consensus        91 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~  170 (353)
                      |++++...|+.|.+|+.++...|.+...  .|..                   ..|+|++|+.+|++.++++|+++++++
T Consensus        80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~~~~~~~~~lP~~~~~~~  138 (343)
T cd08236          80 VAVNPLLPCGKCEYCKKGEYSLCSNYDY--IGSR-------------------RDGAFAEYVSVPARNLIKIPDHVDYEE  138 (343)
T ss_pred             EEEcCCCCCCCChhHHCcChhhCCCcce--Eecc-------------------cCCcccceEEechHHeEECcCCCCHHH
Confidence            9999999999999999999999988642  2211                   125899999999999999999999999


Q ss_pred             hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      ++.+ ..+++||+++. ..++.++++|||+|+|.+|++++|+|+++|+++|+++.+++++.+.++++|++.+++++  ..
T Consensus       139 aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~--~~  214 (343)
T cd08236         139 AAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK--EE  214 (343)
T ss_pred             HHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc--cc
Confidence            9888 48899999984 77899999999998899999999999999994499998899999999999998888876  33


Q ss_pred             cHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecc-h-hhhhcCcEEEeeecCCCC--
Q 018627          251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-Y-GLFLSGRTLKGSLFGGWK--  325 (353)
Q Consensus       251 ~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~--  325 (353)
                      . .+.+....++ ++|++|||+|....+..++++++++ |+++.+|.......+... . ..+.+++++.++......  
T Consensus       215 ~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (343)
T cd08236         215 D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPF  292 (343)
T ss_pred             c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccccc
Confidence            4 5666666666 7999999998767789999999997 999999976543222211 1 123568888887653321  


Q ss_pred             CCCcHHHHHHHHHcCCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~~  345 (353)
                      ..+.+.++++++.++++.+.
T Consensus       293 ~~~~~~~~~~~~~~~~l~~~  312 (343)
T cd08236         293 PGDEWRTALDLLASGKIKVE  312 (343)
T ss_pred             chhhHHHHHHHHHcCCCChH
Confidence            14578899999999998643

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.5e-36  Score=287.05  Aligned_cols=302  Identities=28%  Similarity=0.413  Sum_probs=255.3

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCC----CCcccccceeEEEEEeCCCCCCCCC
Q 018627           13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI----FPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~----~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      |||+++..++ ..+++++++.|.|.++||+||+.++++|++|...+.+...    .|.++|+|++|+|+++|+++..+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~   80 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV   80 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence            7899998876 3499999999999999999999999999999988877642    3668999999999999999999999


Q ss_pred             CCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           88 GEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        88 Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      ||+|+..+. ..|+.|.+|+.++.++|......  |..                   ..|+|++|+.++++.++++|+++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------------------~~g~~~s~~~~~~~~~~~lp~~~  139 (341)
T cd08297          81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYT-------------------VDGTFAEYAIADARYVTPIPDGL  139 (341)
T ss_pred             CCEEEEecCCCCCCCCccccCCCcccCCCcccc--ccc-------------------cCCcceeEEEeccccEEECCCCC
Confidence            999998764 67999999999999999776432  211                   12589999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++++++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.++++
T Consensus       140 ~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~  217 (341)
T cd08297         140 SFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDF  217 (341)
T ss_pred             CHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcC
Confidence            999999999999999999855 58999999999998 6799999999999999 89999999999999999999998887


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  323 (353)
                      .  ..++.+.+.+.+++ ++|++||+.+....+..++++++++ |+++.+|.... ...++....+ .+++++.++....
T Consensus       218 ~--~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  293 (341)
T cd08297         218 K--KSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVGT  293 (341)
T ss_pred             C--CccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccCC
Confidence            6  44677788877765 8999999877767889999999997 99999997653 2223333333 4588888754332


Q ss_pred             CCCCCcHHHHHHHHHcCCCCC
Q 018627          324 WKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i~~  344 (353)
                         .+++++++++++++++.+
T Consensus       294 ---~~~~~~~~~~~~~~~l~~  311 (341)
T cd08297         294 ---RQDLQEALEFAARGKVKP  311 (341)
T ss_pred             ---HHHHHHHHHHHHcCCCcc
Confidence               368999999999999865

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.4e-37  Score=288.73  Aligned_cols=295  Identities=25%  Similarity=0.372  Sum_probs=238.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC--------------CCCCcccccceeEEEEEe
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------------AIFPRIFGHEASGIVESV   78 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~--------------~~~p~~~G~e~~G~V~~v   78 (353)
                      |||+++..+  +++++++|.|+++++||+||+.++++|++|+..+.|.              ..+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            688998766  6999999999999999999999999999999888762              135789999999999999


Q ss_pred             CCCCCC-CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC
Q 018627           79 GPGVTE-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG  157 (353)
Q Consensus        79 G~~~~~-~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~  157 (353)
                      |+++++ +++||+|++++...|+.|..|..|+.+          .   .                  .|+|+||++++.+
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~----------~---~------------------~g~~~~~~~v~~~  127 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP----------E---A------------------PGGYAEYMLLSEA  127 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc----------C---C------------------CCceeeeEEechH
Confidence            999987 999999999999999999999433111          0   1                  2589999999999


Q ss_pred             ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      .++++|+++++++++ +..++++||+++ ..+++++|++|||+|+|++|.+++|+|+.+|++.++++++++++.+.++++
T Consensus       128 ~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~  205 (341)
T cd08262         128 LLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAM  205 (341)
T ss_pred             HeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHc
Confidence            999999999999887 556889999985 778999999999998899999999999999996688888899999999999


Q ss_pred             CCceEeCCCCCCc--cHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCc
Q 018627          238 GVTEFLNPNDNNE--PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR  314 (353)
Q Consensus       238 G~~~~~~~~~~~~--~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  314 (353)
                      |++.++++.....  .+. .+.....+ ++|+++|++|++..+..++++++++ |+++.+|.......+.. ...+.+++
T Consensus       206 g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~-~~~~~~~~  282 (341)
T cd08262         206 GADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEP-ALAIRKEL  282 (341)
T ss_pred             CCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCH-HHHhhcce
Confidence            9988888753111  222 33444444 8999999998755778899999996 99999997643222221 12234677


Q ss_pred             EEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627          315 TLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       315 ~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li  348 (353)
                      ++.++...   ..+++.++++++++|++++.+++
T Consensus       283 ~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i  313 (341)
T cd08262         283 TLQFSLGY---TPEEFADALDALAEGKVDVAPMV  313 (341)
T ss_pred             EEEEEecc---cHHHHHHHHHHHHcCCCChHHhe
Confidence            77655432   23578999999999999876544

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=7.7e-37  Score=288.82  Aligned_cols=303  Identities=23%  Similarity=0.362  Sum_probs=251.0

Q ss_pred             eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627           14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH   90 (353)
Q Consensus        14 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd~   90 (353)
                      |+++.++.+..+++++++.|++.++||+||++++++|++|+..+.+..   .+|.++|||++|+|+++|+++.++++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR   80 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence            578889888779999999999999999999999999999998887754   45889999999999999999999999999


Q ss_pred             EE-eecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           91 VL-TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        91 V~-~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      |+ ......|++|.+|+.+..++|+......+|.. ..+             ....|+|+||+.++.+.++++|++++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~  146 (337)
T cd05283          81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKY-PDG-------------TITQGGYADHIVVDERFVFKIPEGLDSA  146 (337)
T ss_pred             EEEecCCCCCCCCccccCCchhcCcchhhcccccc-cCC-------------CcCCCcceeEEEechhheEECCCCCCHH
Confidence            97 45556899999999999999988654332211 000             0113599999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN  249 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~  249 (353)
                      +++.+.+.+.+||+++.+ ..+++|++++|.|+|++|++++++|+++|+ +|+++++++++.+.++++|++.+++..  .
T Consensus       147 ~aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~--~  222 (337)
T cd05283         147 AAAPLLCAGITVYSPLKR-NGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATK--D  222 (337)
T ss_pred             HhhhhhhHHHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCc--c
Confidence            999999999999999744 568999999998889999999999999999 899999999999999999999888765  2


Q ss_pred             ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCCCCC
Q 018627          250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKT  328 (353)
Q Consensus       250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~  328 (353)
                      .++..   . ..+++|++|||+|....+..++++++++ |+++.+|......  .++... +.+++++.++....   .+
T Consensus       223 ~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~~  292 (337)
T cd05283         223 PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---RK  292 (337)
T ss_pred             hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---HH
Confidence            22221   1 2348999999999865688999999997 9999999765432  333333 34699999887654   46


Q ss_pred             cHHHHHHHHHcCCCCC
Q 018627          329 DLPSLVNRYLKKVRNT  344 (353)
Q Consensus       329 ~~~~~~~~l~~g~i~~  344 (353)
                      ++.++++++.++++++
T Consensus       293 ~~~~~~~~~~~~~l~~  308 (337)
T cd05283         293 ETQEMLDFAAEHGIKP  308 (337)
T ss_pred             HHHHHHHHHHhCCCcc
Confidence            8999999999998864

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.6e-36  Score=287.24  Aligned_cols=301  Identities=29%  Similarity=0.454  Sum_probs=246.5

Q ss_pred             EEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC----C--CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----A--IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        15 a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~----~--~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |+++++++. +++++.|.|.+.++||+|||.++++|+.|++.+.+.    .  .+|.++|+|++|+|+++|+++.++++|
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (343)
T cd05285           1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG   79 (343)
T ss_pred             CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence            467788865 999999999999999999999999999998865321    1  357789999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL  168 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~  168 (353)
                      |+|++.+..+|++|..|+.|++++|+.....  +....                  .|+|++|++++++.++++|+++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~~  139 (343)
T cd05285          80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPV------------------DGTLCRYVNHPADFCHKLPDNVSL  139 (343)
T ss_pred             CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccC------------------CCceeeeEEecHHHcEECcCCCCH
Confidence            9999999999999999999999999764321  10001                  258999999999999999999999


Q ss_pred             hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      ++++.+ .++.+|++++ +.+++++|++|||+|+|++|++++|+|+++|++.|+++.+++++.+.++++|++.+++++  
T Consensus       140 ~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~--  215 (343)
T cd05285         140 EEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVR--  215 (343)
T ss_pred             HHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccc--
Confidence            999877 4888999986 788999999999998899999999999999994489998999999999999999998876  


Q ss_pred             Ccc---HHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627          249 NEP---VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW  324 (353)
Q Consensus       249 ~~~---~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  324 (353)
                      ..+   +.+.+.+.+++ ++|++|||+|....+...+++++++ |+++.+|.......+++. ...++++.+.++...  
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~--  291 (343)
T cd05285         216 TEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY--  291 (343)
T ss_pred             cccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC--
Confidence            333   36667776666 8999999999755788999999997 999999865443222222 123457777765432  


Q ss_pred             CCCCcHHHHHHHHHcCCCCCCC
Q 018627          325 KPKTDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~~~  346 (353)
                        .+.+.++++++.++++.+.+
T Consensus       292 --~~~~~~~~~~l~~~~l~~~~  311 (343)
T cd05285         292 --ANTYPTAIELLASGKVDVKP  311 (343)
T ss_pred             --hHHHHHHHHHHHcCCCCchH
Confidence              26788999999999876443

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=2.6e-36  Score=285.58  Aligned_cols=306  Identities=30%  Similarity=0.395  Sum_probs=249.4

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC------CCCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+++..+++.+.|.|.|+++||+||+.++++|+.|+..+.+.      ..+|.++|+|++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            689999988877999999999999999999999999999998874332      24577899999999999999998999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++.+...|+.|..|..+++++|...  .++|.. .                  .|+|++|++++.+.++++|+++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~------------------~g~~~~~v~v~~~~~~~lP~~~  139 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNT--KILGVD-T------------------DGCFAEYVVVPEENLWKNDKDI  139 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCccc--ceEecc-C------------------CCcceEEEEechHHcEECcCCC
Confidence            999999999999999999999999999753  233322 1                  2589999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      +++++ .+...+.++++++.  ....+|++|||+|+|.+|++++|+|+++|+.+|+++++++++.+.++++|+++++++.
T Consensus       140 ~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~  216 (341)
T cd05281         140 PPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR  216 (341)
T ss_pred             CHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc
Confidence            98555 45558888888764  4567899999988899999999999999986688888899999999999998888765


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                        ..++. .+++..++ ++|++|||+|........+++++++ |+++.+|.......+++....+++++.+.+.....  
T Consensus       217 --~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  290 (341)
T cd05281         217 --EEDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK--  290 (341)
T ss_pred             --cccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC--
Confidence              44566 67776665 9999999998877788999999997 99999987654333333332345677777665222  


Q ss_pred             CCCcHHHHHHHHHcCCCCCCCCc
Q 018627          326 PKTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~~~li  348 (353)
                      ..+.+.+++++++++++++.+++
T Consensus       291 ~~~~~~~~~~~l~~~~l~~~~~~  313 (341)
T cd05281         291 MFETWYQVSALLKSGKVDLSPVI  313 (341)
T ss_pred             cchhHHHHHHHHHcCCCChhHhe
Confidence            23568889999999998765543

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=1.2e-36  Score=285.82  Aligned_cols=277  Identities=21%  Similarity=0.241  Sum_probs=227.2

Q ss_pred             eeEEEEecCCC-----CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCC
Q 018627           13 CKAAVAWGAGQ-----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus        13 ~~a~~~~~~~~-----~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      |||+++.+++.     .++++++|.|.|+++||+||+.++++|++|++.+.|.+    .+|.++|||++|+|+++|+++.
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            68999998875     38889999999999999999999999999999887754    3578999999999999999998


Q ss_pred             C-CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEEC
Q 018627           84 E-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  162 (353)
Q Consensus        84 ~-~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i  162 (353)
                      + |++||+|++.+.                             .                  .|+|+||+.+|++.++++
T Consensus        81 ~~~~vGd~V~~~~~-----------------------------~------------------~g~~a~~~~v~~~~~~~i  113 (324)
T cd08291          81 AQSLIGKRVAFLAG-----------------------------S------------------YGTYAEYAVADAQQCLPL  113 (324)
T ss_pred             ccCCCCCEEEecCC-----------------------------C------------------CCcchheeeecHHHeEEC
Confidence            6 999999987621                             0                  148999999999999999


Q ss_pred             CCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE-cC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc
Q 018627          163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF-GL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT  240 (353)
Q Consensus       163 P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~-Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~  240 (353)
                      |+++++++++.+.+.+.|||.++ +.... ++++++|+ ++ |++|++++|+|+++|+ +|+++++++++.+.++++|++
T Consensus       114 P~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~  190 (324)
T cd08291         114 PDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAE  190 (324)
T ss_pred             CCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCc
Confidence            99999999998888889997554 55555 56667776 55 9999999999999999 899999999999999999999


Q ss_pred             eEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEe
Q 018627          241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKG  318 (353)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g  318 (353)
                      +++++.  ..++.+.+++.+++ ++|++||++|+. .....+.+++++ |+++.+|.........++... +.+++++.+
T Consensus       191 ~~i~~~--~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08291         191 YVLNSS--DPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEG  266 (324)
T ss_pred             EEEECC--CccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEE
Confidence            999876  56788888888776 899999999984 467789999997 999999975442221232222 456999999


Q ss_pred             eecCCCCC---CCcHHHHHHHHHcCCCCC
Q 018627          319 SLFGGWKP---KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       319 ~~~~~~~~---~~~~~~~~~~l~~g~i~~  344 (353)
                      +....+..   .+++.+++++++ +++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  294 (324)
T cd08291         267 FWLTTWLQKLGPEVVKKLKKLVK-TELKT  294 (324)
T ss_pred             EEHHHhhcccCHHHHHHHHHHHh-Ccccc
Confidence            88766532   346788888887 76653

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-36  Score=283.82  Aligned_cols=291  Identities=29%  Similarity=0.353  Sum_probs=238.7

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      ||++++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+..  .+|.++|||++|+|+.+|+++..+++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGD   80 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCCCCCCCeecccceeEEEEEECCCCCCCCCCC
Confidence            6899987766 458999999999999999999999999999998876532  4578999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      +|++.+...|+.|+.|+.|..++|.+...  .|..                   ..|+|++|++++++.++++|++++++
T Consensus        81 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~~  139 (325)
T cd08264          81 RVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVV-------------------SNGGYAEYIVVPEKNLFKIPDSISDE  139 (325)
T ss_pred             EEEECCCcCCCCChhhcCCCccccCccce--eecc-------------------CCCceeeEEEcCHHHceeCCCCCCHH
Confidence            99999989999999999999999987543  2221                   12589999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      +++.+++.+.+||+++.. .++++|++|+|+|+ |++|++++++|+++|+ +|+++.+    .+.++++|++++++..  
T Consensus       140 ~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~--  211 (325)
T cd08264         140 LAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD--  211 (325)
T ss_pred             HhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch--
Confidence            999999999999999854 88999999999998 9999999999999999 7877752    3666789998888754  


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCCC
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKPK  327 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~  327 (353)
                        +..+.+++++ +++|+++|++|. ..+..++++++++ |+++.+|.... ....++...+. ++.++.++..+.   +
T Consensus       212 --~~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~  282 (325)
T cd08264         212 --EVEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLTG-GEVKLDLSDLYSKQISIIGSTGGT---R  282 (325)
T ss_pred             --HHHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCC-CCCccCHHHHhhcCcEEEEccCCC---H
Confidence              1245566555 689999999997 6789999999997 99999987522 22333333333 477787765443   4


Q ss_pred             CcHHHHHHHHHcCC
Q 018627          328 TDLPSLVNRYLKKV  341 (353)
Q Consensus       328 ~~~~~~~~~l~~g~  341 (353)
                      +++.++++++...+
T Consensus       283 ~~~~~~~~l~~~~~  296 (325)
T cd08264         283 KELLELVKIAKDLK  296 (325)
T ss_pred             HHHHHHHHHHHcCC
Confidence            67888998886444

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.8e-36  Score=280.37  Aligned_cols=297  Identities=31%  Similarity=0.476  Sum_probs=247.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |+|+++..+++++.++++|.|++.+++|+||+.++++|++|++.+.|..   ..|.++|+|++|+|+.+|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            6899998766669999999999999999999999999999999887753   4568999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      +|++++...|+.|.+|+.+.++.|++..  ..|..                   ..|+|++|+.++.+.++++|++++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~~  139 (332)
T cd08259          81 RVILYYYIPCGKCEYCLSGEENLCRNRA--EYGEE-------------------VDGGFAEYVKVPERSLVKLPDNVSDE  139 (332)
T ss_pred             EEEECCCCCCcCChhhhCCCcccCCCcc--ccccc-------------------cCCeeeeEEEechhheEECCCCCCHH
Confidence            9999999999999999999999998752  23322                   12589999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      +++.+++++.+||+++.. .++.+++++||+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++..  
T Consensus       140 ~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~--  215 (332)
T cd08259         140 SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS--  215 (332)
T ss_pred             HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH--
Confidence            999999999999999866 88999999999997 9999999999999999 888888888999999889987777653  


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCc-eecchhhhhcCcEEEeeecCCCCCC
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLFLSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~  327 (353)
                       . +.+.+.+..  ++|++++++|. .....+++.++++ |+++.+|....... +..... .+++..+.++..   ...
T Consensus       216 -~-~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~  285 (332)
T cd08259         216 -K-FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLL-ILKEIRIIGSIS---ATK  285 (332)
T ss_pred             -H-HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHH-HhCCcEEEEecC---CCH
Confidence             2 555555433  79999999987 4578889999996 99999987644222 122222 245777776642   224


Q ss_pred             CcHHHHHHHHHcCCCCC
Q 018627          328 TDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~  344 (353)
                      .++.++++++.+|.+.+
T Consensus       286 ~~~~~~~~~~~~~~l~~  302 (332)
T cd08259         286 ADVEEALKLVKEGKIKP  302 (332)
T ss_pred             HHHHHHHHHHHcCCCcc
Confidence            67889999999998764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.8e-35  Score=278.70  Aligned_cols=303  Identities=31%  Similarity=0.431  Sum_probs=252.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEH   90 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd~   90 (353)
                      |||+++.++++ +++.+.|.|+++++||+||+.++++|+.|+..+.|..  .+|.++|+|++|+|+.+|+++.++++||+
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~   79 (334)
T cd08234           1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDR   79 (334)
T ss_pred             CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence            68999998886 9999999999999999999999999999999887765  46789999999999999999999999999


Q ss_pred             EEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627           91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK  170 (353)
Q Consensus        91 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~  170 (353)
                      |++.+...|++|..|..++.+.|.....  .|.. .                  .|+|++|+.++.+.++++|+++++.+
T Consensus        80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~lP~~~~~~~  138 (334)
T cd08234          80 VAVDPNIYCGECFYCRRGRPNLCENLTA--VGVT-R------------------NGGFAEYVVVPAKQVYKIPDNLSFEE  138 (334)
T ss_pred             EEEcCCcCCCCCccccCcChhhCCCcce--eccC-C------------------CCcceeEEEecHHHcEECcCCCCHHH
Confidence            9998888899999999999999987653  1111 1                  24899999999999999999999999


Q ss_pred             hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      ++.+ ..+.++++++ +.+++.+|++|||+|+|.+|++++++|++.|+++|+++.+++++.+.++++|++.++++.  ..
T Consensus       139 aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~  214 (334)
T cd08234         139 AALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS--RE  214 (334)
T ss_pred             Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC--CC
Confidence            9876 6888999987 778999999999998899999999999999995488898999999999999998888775  33


Q ss_pred             cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCCCCc
Q 018627          251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKPKTD  329 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~  329 (353)
                      ++... +...++++|++|||++....+...+++++++ |+++.+|.........+....++ +++++.+....    .+.
T Consensus       215 ~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  288 (334)
T cd08234         215 DPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYT  288 (334)
T ss_pred             CHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHH
Confidence            44434 3333348999999998767888999999997 99999987654233344444333 57888776532    356


Q ss_pred             HHHHHHHHHcCCCCCCCC
Q 018627          330 LPSLVNRYLKKVRNTRKP  347 (353)
Q Consensus       330 ~~~~~~~l~~g~i~~~~l  347 (353)
                      +++++++++++++.+.++
T Consensus       289 ~~~~~~~~~~~~l~~~~~  306 (334)
T cd08234         289 FPRAIALLESGKIDVKGL  306 (334)
T ss_pred             HHHHHHHHHcCCCChhhh
Confidence            889999999999876543

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=3.1e-36  Score=264.02  Aligned_cols=282  Identities=23%  Similarity=0.328  Sum_probs=232.2

Q ss_pred             ccceeeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCC
Q 018627            9 QVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPG   81 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~   81 (353)
                      ++...|++++...+.|   ++++..++|.....+|+||..|+.|||+|+..++|.+    ++|.+-|+|++|+|+.+|++
T Consensus        16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~   95 (354)
T KOG0025|consen   16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN   95 (354)
T ss_pred             cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence            5567899999888877   8899999999888889999999999999999999998    67889999999999999999


Q ss_pred             CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627           82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (353)
Q Consensus        82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~  161 (353)
                      +..|++||+|+....                                               +.|.|++|.+.+++.+++
T Consensus        96 vkgfk~Gd~VIp~~a-----------------------------------------------~lGtW~t~~v~~e~~Li~  128 (354)
T KOG0025|consen   96 VKGFKPGDWVIPLSA-----------------------------------------------NLGTWRTEAVFSESDLIK  128 (354)
T ss_pred             cCccCCCCeEeecCC-----------------------------------------------CCccceeeEeecccceEE
Confidence            999999999998732                                               236999999999999999


Q ss_pred             CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHH----HHHh
Q 018627          162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKA  236 (353)
Q Consensus       162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~----~~~~  236 (353)
                      +++.++++.||.+.++-+|||++|.+..++.+||+|+-.|+ +++|++++|+|+++|+++|-++ |+....+    .++.
T Consensus       129 vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~  207 (354)
T KOG0025|consen  129 VDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKS  207 (354)
T ss_pred             cCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHH
Confidence            99999999999999999999999999999999999988898 8999999999999999666555 5554444    4466


Q ss_pred             CCCceEeCCCCCCccHHH-HHHHH-hcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-Cceecchhhhhc
Q 018627          237 FGVTEFLNPNDNNEPVQQ-VIKRI-TDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLS  312 (353)
Q Consensus       237 ~G~~~~~~~~~~~~~~~~-~~~~~-~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~  312 (353)
                      +||++++...    .+.. ..... ... .+.+.|||+|+.. .....+.|.++ |.++.+|....+ ..++.+++ +|+
T Consensus       208 lGA~~ViTee----el~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGMSkqPv~~~ts~l-IFK  280 (354)
T KOG0025|consen  208 LGATEVITEE----ELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGMSKQPVTVPTSLL-IFK  280 (354)
T ss_pred             cCCceEecHH----HhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCccCCCcccccchh-eec
Confidence            9999988532    2221 11111 222 7899999999954 45666889997 999999987653 23444444 588


Q ss_pred             CcEEEeeecCCCCCC--------CcHHHHHHHHHcCCCCCC
Q 018627          313 GRTLKGSLFGGWKPK--------TDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       313 ~~~i~g~~~~~~~~~--------~~~~~~~~~l~~g~i~~~  345 (353)
                      +++++|+|...|...        +.+.++..|+.+|+|.-.
T Consensus       281 dl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~  321 (354)
T KOG0025|consen  281 DLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP  321 (354)
T ss_pred             cceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc
Confidence            999999999999843        346688999999998743

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.2e-35  Score=277.68  Aligned_cols=302  Identities=25%  Similarity=0.388  Sum_probs=251.6

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++...+.  .+++.+.+.|.+.+++|+||+.++++|++|++.+.|..    .+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            68999884433  38888888888999999999999999999998887754    3478999999999999999998999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++.+...|++|.+|..+.++.|.+...  .|..                   ..|+|++|++++.+.++++|+++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-------------------~~g~~~~~~~~~~~~~~~~p~~~  139 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEH-------------------VDGGYAEYVAVPARNLLPIPDNL  139 (342)
T ss_pred             CCCEEEEccccccccchhhccccccccccccc--cccc-------------------cCcceeEEEEechHHceeCCCCC
Confidence            99999999999999999999999999986432  2211                   12589999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++++++.++..+.++++++.+..++.+++++||+|+ +.+|++++++++..|+ +++.+++++++.+.+++++.+.+++.
T Consensus       140 ~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~  218 (342)
T cd08266         140 SFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY  218 (342)
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec
Confidence            999999999999999999878888999999999998 7899999999999999 88999899999999988888777765


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecch-hhhhcCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~  323 (353)
                      .  ..++.+.+...+.+ ++|++++++|. ..+..++++++++ |+++.+|..... ...+.. ..+.+++++.+.....
T Consensus       219 ~--~~~~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  293 (342)
T cd08266         219 R--KEDFVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMGT  293 (342)
T ss_pred             C--ChHHHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecCC
Confidence            4  44566666666655 89999999987 5678899999997 999999876542 223333 2245688888776443


Q ss_pred             CCCCCcHHHHHHHHHcCCCCC
Q 018627          324 WKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i~~  344 (353)
                         ..++.+++++++++.+.+
T Consensus       294 ---~~~~~~~~~~l~~~~l~~  311 (342)
T cd08266         294 ---KAELDEALRLVFRGKLKP  311 (342)
T ss_pred             ---HHHHHHHHHHHHcCCccc
Confidence               357889999999998764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=1.1e-35  Score=279.39  Aligned_cols=279  Identities=20%  Similarity=0.231  Sum_probs=224.5

Q ss_pred             eeeEEEEecC--CCC----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCC
Q 018627           12 TCKAAVAWGA--GQP----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        12 ~~~a~~~~~~--~~~----l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      +|+||++.+.  +++    +++++.|.|+|+++||||||.+++||+.|........++|.++|+|++|+|++   .++.|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~~~~~p~v~G~e~~G~V~~---~~~~~   78 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKRLNEGDTMIGTQVAKVIES---KNSKF   78 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccccCCCCCcEecceEEEEEec---CCCCC
Confidence            6899999883  333    89999999999999999999999999987653222124688999999999995   34679


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC---ceEEC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG---CAVKV  162 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~---~v~~i  162 (353)
                      ++||||++.                                                   ++|++|+.++.+   .++++
T Consensus        79 ~~Gd~V~~~---------------------------------------------------~~~~~~~~~~~~~~~~~~~i  107 (329)
T cd08294          79 PVGTIVVAS---------------------------------------------------FGWRTHTVSDGKDQPDLYKL  107 (329)
T ss_pred             CCCCEEEee---------------------------------------------------CCeeeEEEECCccccceEEC
Confidence            999999875                                                   379999999999   99999


Q ss_pred             CCCCC--h---hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          163 SSIAP--L---EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       163 P~~l~--~---~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      |++++  +   .+++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++.+++++.+.+++
T Consensus       108 P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~  186 (329)
T cd08294         108 PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKE  186 (329)
T ss_pred             CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence            99988  2   2334677899999999988889999999999986 9999999999999999 89999999999999999


Q ss_pred             CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC--ce---e-cchhhh
Q 018627          237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EV---A-AHYGLF  310 (353)
Q Consensus       237 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~---~-~~~~~~  310 (353)
                      +|+++++++.  ..++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|......  ..   . +....+
T Consensus       187 ~Ga~~vi~~~--~~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~  262 (329)
T cd08294         187 LGFDAVFNYK--TVSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETII  262 (329)
T ss_pred             cCCCEEEeCC--CccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHh
Confidence            9999999886  5677788877766689999999998 6789999999997 9999998532211  11   1 112223


Q ss_pred             hcCcEEEeeecCCCC--CCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          311 LSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       311 ~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      ++++++.+++...+.  ..+.+.++++++++|++++....+
T Consensus       263 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~  303 (329)
T cd08294         263 FKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVT  303 (329)
T ss_pred             hhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccc
Confidence            568888887654431  123467889999999998765543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.3e-35  Score=280.38  Aligned_cols=300  Identities=28%  Similarity=0.436  Sum_probs=240.3

Q ss_pred             EEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhc-cCC-----CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627           17 VAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEH   90 (353)
Q Consensus        17 ~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~-g~~-----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~   90 (353)
                      +++++++ +++++.|.|.++++||+||+.++++|++|+..+. +..     .+|.++|+|++|+|+++|+++.+|++||+
T Consensus         2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~   80 (339)
T cd08232           2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR   80 (339)
T ss_pred             eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence            5677776 9999999999999999999999999999987653 321     35779999999999999999999999999


Q ss_pred             EEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627           91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK  170 (353)
Q Consensus        91 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~  170 (353)
                      |++.+...|++|.+|..|+.+.|.....  .+....+.              ...|+|++|+.++.+.++++|+++++++
T Consensus        81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~--------------~~~g~~~~~v~v~~~~~~~iP~~~~~~~  144 (339)
T cd08232          81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF--LGSAMRFP--------------HVQGGFREYLVVDASQCVPLPDGLSLRR  144 (339)
T ss_pred             EEEccCCcCCCChHHhCcCcccCccccc--eeeccccC--------------CCCCceeeEEEechHHeEECcCCCCHHH
Confidence            9999999999999999999999998532  11100000              0125999999999999999999999999


Q ss_pred             hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      |+. ..+++++|+++.+.... ++++|||.|+|.+|++++|+|+++|+++++++++++++.++++++|++++++++.  .
T Consensus       145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~  220 (339)
T cd08232         145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--D  220 (339)
T ss_pred             hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--h
Confidence            876 45888999998665556 9999999888999999999999999867899989999999999999988888752  2


Q ss_pred             cHHHHHHHHh-c-CCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCCCC
Q 018627          251 PVQQVIKRIT-D-GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       251 ~~~~~~~~~~-~-~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~  327 (353)
                      ++    +... . +++|++||++|+...+...+++++++ |+++.+|.....  ....... +.+++++.+....    .
T Consensus       221 ~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~----~  289 (339)
T cd08232         221 PL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGGP--VPLPLNALVAKELDLRGSFRF----D  289 (339)
T ss_pred             hh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccCcHHHHhhcceEEEEEecC----H
Confidence            22    2222 2 36999999999766788999999997 999999865422  2223222 3467888776522    3


Q ss_pred             CcHHHHHHHHHcCCCCCCCCc
Q 018627          328 TDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~~~li  348 (353)
                      +++.++++++.+|++++.+++
T Consensus       290 ~~~~~~~~~~~~~~i~~~~~~  310 (339)
T cd08232         290 DEFAEAVRLLAAGRIDVRPLI  310 (339)
T ss_pred             HHHHHHHHHHHcCCCCchhhe
Confidence            578899999999998765543

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.6e-35  Score=277.52  Aligned_cols=278  Identities=22%  Similarity=0.289  Sum_probs=234.3

Q ss_pred             eeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCC
Q 018627           13 CKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        13 ~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      |||+++.+++.+   ++++++|.|.+.++||+|||.++++|++|+..+.|..    ..|.++|||++|+|+++|+++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            689999887653   8899999999999999999999999999998887754    346899999999999999999999


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||+|++.+.                                                .|+|++|+++++..++++|++
T Consensus        81 ~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~ip~~  112 (324)
T cd08292          81 QVGQRVAVAPV------------------------------------------------HGTWAEYFVAPADGLVPLPDG  112 (324)
T ss_pred             CCCCEEEeccC------------------------------------------------CCcceeEEEEchHHeEECCCC
Confidence            99999998621                                                148999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      +++++++.+++.+.++|+++ +..++++|++|||+|+ |.+|++++|+|+++|+ +++++.+++++.+.++++|++++++
T Consensus       113 ~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (324)
T cd08292         113 ISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVS  190 (324)
T ss_pred             CCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEc
Confidence            99999999988889999987 5578999999999987 9999999999999999 7888888888888888899988887


Q ss_pred             CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecC
Q 018627          245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG  322 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  322 (353)
                      +.  +.++.+.+.+++++ ++|++|||+|+ .....++++++++ |+++.+|.... ..+.+.... +.+++++.++...
T Consensus       191 ~~--~~~~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  265 (324)
T cd08292         191 TE--QPGWQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMSG-EPMQISSGDLIFKQATVRGFWGG  265 (324)
T ss_pred             CC--CchHHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCCC-CCCcCCHHHHhhCCCEEEEEEcH
Confidence            76  56778888888877 99999999998 4678899999997 99999997533 223333322 3568999888765


Q ss_pred             CCCC-------CCcHHHHHHHHHcCCCCCC
Q 018627          323 GWKP-------KTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       323 ~~~~-------~~~~~~~~~~l~~g~i~~~  345 (353)
                      .+..       .+.+.++++++.+|++++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~  295 (324)
T cd08292         266 RWSQEMSVEYRKRMIAELLTLALKGQLLLP  295 (324)
T ss_pred             HhhhhcCHHHHHHHHHHHHHHHHCCCccCc
Confidence            4321       2467889999999998753

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.7e-35  Score=278.20  Aligned_cols=268  Identities=17%  Similarity=0.222  Sum_probs=216.9

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcc
Q 018627           25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQ  104 (353)
Q Consensus        25 l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~  104 (353)
                      +++.+.|.|+|++|||||||.++++|+.+..-.......|.++|.|++|+|+++|+   .|++||||++.          
T Consensus        19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~----------   85 (325)
T TIGR02825        19 FELKTVELPPLNNGEVLLEALFLSVDPYMRVAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS----------   85 (325)
T ss_pred             eEEEeccCCCCCCCcEEEEEEEEecCHHHhcccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe----------
Confidence            99999999999999999999999999976543222124578999999999999874   59999999875          


Q ss_pred             cccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEEC----CCCCChhhh-hhhchhhh
Q 018627          105 CKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV----SSIAPLEKI-CLLSCGLS  179 (353)
Q Consensus       105 c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i----P~~l~~~~a-a~l~~~~~  179 (353)
                                                               ++|++|+.++.+.+.++    |++++++++ +.+++++.
T Consensus        86 -----------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~  124 (325)
T TIGR02825        86 -----------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGL  124 (325)
T ss_pred             -----------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHH
Confidence                                                     26999999999888877    999999997 67888999


Q ss_pred             HHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHH
Q 018627          180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       180 ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~  258 (353)
                      |||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++.+++++.+.++++|++.++++++ ...+.+.++.
T Consensus       125 TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~  202 (325)
T TIGR02825       125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT-VKSLEETLKK  202 (325)
T ss_pred             HHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc-cccHHHHHHH
Confidence            99999888899999999999996 9999999999999999 8999999999999999999999998863 2356666666


Q ss_pred             HhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC---Ccee---cchhhhhcCcEEEeeecCCCCC---CCc
Q 018627          259 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEVA---AHYGLFLSGRTLKGSLFGGWKP---KTD  329 (353)
Q Consensus       259 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~---~~~~~~~~~~~i~g~~~~~~~~---~~~  329 (353)
                      ..++++|++||++|+ ..+..++++++++ |+++.+|.....   ...+   .....+++++++.++....+..   .+.
T Consensus       203 ~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  280 (325)
T TIGR02825       203 ASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKA  280 (325)
T ss_pred             hCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHH
Confidence            555589999999997 4678999999997 999999975321   1111   1122234688888876544322   246


Q ss_pred             HHHHHHHHHcCCCCCCCCccC
Q 018627          330 LPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       330 ~~~~~~~l~~g~i~~~~li~~  350 (353)
                      +.++++++++|++++....++
T Consensus       281 ~~~~~~l~~~g~l~~~~~~~~  301 (325)
T TIGR02825       281 LKELLKWVLEGKIQYKEYVIE  301 (325)
T ss_pred             HHHHHHHHHCCCcccceeccc
Confidence            889999999999988755543

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=2.3e-35  Score=278.96  Aligned_cols=299  Identities=28%  Similarity=0.384  Sum_probs=244.2

Q ss_pred             ecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC------CCCCcccccceeEEEEEeCCCCCCCCCCCeEE
Q 018627           19 WGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTEFNEGEHVL   92 (353)
Q Consensus        19 ~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~   92 (353)
                      +.++.++++++.|.|.|+++||+||+.++++|++|+..+.+.      ..+|.++|+|++|+|+++|+++.++++||+|+
T Consensus         5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   84 (340)
T TIGR00692         5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS   84 (340)
T ss_pred             ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence            567778999999999999999999999999999998875432      14577899999999999999999999999999


Q ss_pred             eecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhh
Q 018627           93 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC  172 (353)
Q Consensus        93 ~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa  172 (353)
                      +.+...|+.|..|..+.+..|.....  .|.. .                  .|+|++|++++++.++++|+++++++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~~~a~  143 (340)
T TIGR00692        85 VETHIVCGKCYACRRGQYHVCQNTKI--FGVD-T------------------DGCFAEYAVVPAQNIWKNPKSIPPEYAT  143 (340)
T ss_pred             ECCcCCCCCChhhhCcChhhCcCcce--Eeec-C------------------CCcceeEEEeehHHcEECcCCCChHhhh
Confidence            99999999999999999999988643  2221 1                  2589999999999999999999986654


Q ss_pred             hhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccH
Q 018627          173 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV  252 (353)
Q Consensus       173 ~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~  252 (353)
                       ++.++.++++++  .....+|+++||.|+|++|.+++|+|+++|++.|+++++++++.+.++++|++.++++.  ..++
T Consensus       144 -~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~--~~~~  218 (340)
T TIGR00692       144 -IQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPF--KEDV  218 (340)
T ss_pred             -hcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEccc--ccCH
Confidence             566888999876  34577899999988899999999999999995588888889999999999998888775  4667


Q ss_pred             HHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCcHH
Q 018627          253 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP  331 (353)
Q Consensus       253 ~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  331 (353)
                      .+.+.++.++ ++|++|||+|+...+...+++++++ |+++.+|.......+++....+++++++.+....  ...+.+.
T Consensus       219 ~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  295 (340)
T TIGR00692       219 VKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGR--HMFETWY  295 (340)
T ss_pred             HHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEecC--CchhhHH
Confidence            7888777665 8999999998777888999999997 9999999764323333222223457777665421  1235678


Q ss_pred             HHHHHHHcCCCCCCC
Q 018627          332 SLVNRYLKKVRNTRK  346 (353)
Q Consensus       332 ~~~~~l~~g~i~~~~  346 (353)
                      +++++++++++++.+
T Consensus       296 ~~~~~l~~~~l~~~~  310 (340)
T TIGR00692       296 TVSRLIQSGKLDLDP  310 (340)
T ss_pred             HHHHHHHcCCCChHH
Confidence            899999999987544

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-35  Score=278.80  Aligned_cols=282  Identities=20%  Similarity=0.247  Sum_probs=224.4

Q ss_pred             ccceeeEEEEec-CCC-----CeEEEEe---ecCC-CCCCeEEEEEeeeecchhhhhhhcc---CCCCCccccc--ceeE
Q 018627            9 QVITCKAAVAWG-AGQ-----PLVVEEV---EVNP-PQPEEIRIKVVCTSLCRSDITAWET---QAIFPRIFGH--EASG   73 (353)
Q Consensus         9 ~~~~~~a~~~~~-~~~-----~l~~~~~---~~p~-~~~~eVlVrv~~~~i~~~D~~~~~g---~~~~p~~~G~--e~~G   73 (353)
                      .+.++|.|++.+ +..     .|++.+.   +.|. +++|||||||.++++|+.|.....+   ...+|.++|+  |++|
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G   84 (348)
T PLN03154          5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG   84 (348)
T ss_pred             ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence            344678888854 322     1777774   5553 5899999999999999998764322   1146889998  8899


Q ss_pred             EEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEE
Q 018627           74 IVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTV  153 (353)
Q Consensus        74 ~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~  153 (353)
                      +|+.+|+++++|++||+|+++                                                   |+|+||..
T Consensus        85 ~v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------~~~aey~~  113 (348)
T PLN03154         85 VSKVVDSDDPNFKPGDLISGI---------------------------------------------------TGWEEYSL  113 (348)
T ss_pred             EEEEEecCCCCCCCCCEEEec---------------------------------------------------CCcEEEEE
Confidence            999999999999999999865                                                   48999999


Q ss_pred             EeCCc--eEE--CCCCCChh-hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          154 VHSGC--AVK--VSSIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       154 ~~~~~--v~~--iP~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      ++.+.  +++  +|++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|++++++
T Consensus       114 v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~  192 (348)
T PLN03154        114 IRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGS  192 (348)
T ss_pred             EeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCC
Confidence            98753  544  59999987 688999999999999988888999999999998 9999999999999999 89999999


Q ss_pred             hhhHHHHH-hCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC-ce--
Q 018627          228 PEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP-EV--  303 (353)
Q Consensus       228 ~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~--  303 (353)
                      +++.+.++ ++|++.++++++ ..++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...... ..  
T Consensus       193 ~~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~  269 (348)
T PLN03154        193 SQKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQ  269 (348)
T ss_pred             HHHHHHHHHhcCCCEEEECCC-cccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCC
Confidence            99999987 799999998752 2367777777766689999999997 5789999999997 9999999764321 10  


Q ss_pred             -ecchh-hhhcCcEEEeeecCCCC--CCCcHHHHHHHHHcCCCCCC
Q 018627          304 -AAHYG-LFLSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       304 -~~~~~-~~~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~g~i~~~  345 (353)
                       ..... .+.+++++.|++.+.+.  ..+.+.++++++++|++++.
T Consensus       270 ~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~  315 (348)
T PLN03154        270 GIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI  315 (348)
T ss_pred             CcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc
Confidence             11222 23568999988765432  12467889999999999863

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.8e-35  Score=279.65  Aligned_cols=281  Identities=20%  Similarity=0.236  Sum_probs=225.4

Q ss_pred             eeeEEEEecCCC-CeEEEEeec----CCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccce--eEEEEEeCC
Q 018627           12 TCKAAVAWGAGQ-PLVVEEVEV----NPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEA--SGIVESVGP   80 (353)
Q Consensus        12 ~~~a~~~~~~~~-~l~~~~~~~----p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~--~G~V~~vG~   80 (353)
                      -+|+|....+.. .|++++.|.    |+|++|||||||++++||+.|+..+.|..    .+|+++|++.  .|++..+|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~   86 (338)
T cd08295           7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS   86 (338)
T ss_pred             EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence            356666434433 399999987    88999999999999999999998887742    4578899754  456666788


Q ss_pred             CCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeC-Cce
Q 018627           81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCA  159 (353)
Q Consensus        81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~-~~v  159 (353)
                      ++..|++||+|+++                                                   |+|+||+++|+ ..+
T Consensus        87 ~v~~~~vGd~V~~~---------------------------------------------------g~~aey~~v~~~~~~  115 (338)
T cd08295          87 GNPDFKVGDLVWGF---------------------------------------------------TGWEEYSLIPRGQDL  115 (338)
T ss_pred             CCCCCCCCCEEEec---------------------------------------------------CCceeEEEecchhce
Confidence            88899999999865                                                   48999999999 799


Q ss_pred             EECC-CCCChh-hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          160 VKVS-SIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       160 ~~iP-~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      +++| ++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++.+++++.+.+++
T Consensus       116 ~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~  194 (338)
T cd08295         116 RKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKN  194 (338)
T ss_pred             eecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence            9995 678887 799999999999999988889999999999997 9999999999999999 89999899999999988


Q ss_pred             -CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCc------eecchhh
Q 018627          237 -FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE------VAAHYGL  309 (353)
Q Consensus       237 -~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~------~~~~~~~  309 (353)
                       +|+++++++.+ +.++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|.......      .++ ...
T Consensus       195 ~lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~-~~~  270 (338)
T cd08295         195 KLGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNL-LNI  270 (338)
T ss_pred             hcCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCH-HHH
Confidence             99999988652 3467777777665689999999997 6789999999997 99999997543211      111 222


Q ss_pred             hhcCcEEEeeecCCCCC--CCcHHHHHHHHHcCCCCCCCCc
Q 018627          310 FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       310 ~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~g~i~~~~li  348 (353)
                      +++++++.++....+..  .+.+.++++++.+|++++....
T Consensus       271 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~  311 (338)
T cd08295         271 IYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDI  311 (338)
T ss_pred             hhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeec
Confidence            35688888866544321  2347788999999999875433

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=6e-35  Score=274.65  Aligned_cols=293  Identities=27%  Similarity=0.385  Sum_probs=243.7

Q ss_pred             eeEEEEecCCC----CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCC
Q 018627           13 CKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        13 ~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      |+|+++.+++.    ++++.+.+.|.++++||+||+.++++|++|+..+.|..   ..|.++|||++|+|+.+|+++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            68999988884    58888999888999999999999999999999887754   456799999999999999999899


Q ss_pred             CCCCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           86 NEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        86 ~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      ++||+|++.+. ..|++|..|..+..++|+...+.  |.. .                  .|+|++|+.++.+.++++|+
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~~~~~~~~~~~lp~  139 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYT-V------------------DGGYAEYMVADERFAYPIPE  139 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccc-c------------------CCceEEEEEecchhEEECCC
Confidence            99999987655 47999999999999999877643  221 1                  25899999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++++.+++.+.+++.+||+++ +.+++++++++||+|+|++|+++++++++.|+ +|+++.+++++.+.++++|++.+++
T Consensus       140 ~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  217 (329)
T cd08298         140 DYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGD  217 (329)
T ss_pred             CCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEec
Confidence            999999999999999999998 88999999999999889999999999999999 8999989999999999999987776


Q ss_pred             CCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627          245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW  324 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  324 (353)
                      ...  .         ...++|+++++.+....++.++++++++ |+++.+|.... ....+....+..+..+.++.... 
T Consensus       218 ~~~--~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-  283 (329)
T cd08298         218 SDD--L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANLT-  283 (329)
T ss_pred             cCc--c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCCC-
Confidence            642  1         1237999999877767899999999997 99999885432 11122223234566776665332 


Q ss_pred             CCCCcHHHHHHHHHcCCCCC
Q 018627          325 KPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~  344 (353)
                        .+++.+++++++++.+++
T Consensus       284 --~~~~~~~~~l~~~~~l~~  301 (329)
T cd08298         284 --RQDGEEFLKLAAEIPIKP  301 (329)
T ss_pred             --HHHHHHHHHHHHcCCCCc
Confidence              357888999999998865

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=5.9e-35  Score=274.80  Aligned_cols=297  Identities=28%  Similarity=0.441  Sum_probs=245.9

Q ss_pred             eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627           14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGEH   90 (353)
Q Consensus        14 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd~   90 (353)
                      ||+++.+++..+++++.|.|.+.+++|+||+.++++|++|...+.+..   .+|.++|||++|+|+++|+++.++++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~   80 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR   80 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence            588888886669999999999999999999999999999998887653   55778999999999999999999999999


Q ss_pred             EEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           91 VLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        91 V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      |+..+. .+|+.|.+|+.+.++.|++..+...+   .                  .|+|++|+.++.+.++++|++++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------------~g~~~~~~~v~~~~~~~~p~~~~~~  139 (330)
T cd08245          81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYT---T------------------QGGYAEYMVADAEYTVLLPDGLPLA  139 (330)
T ss_pred             EEEccccCCCCCChhhhCcCcccCcCccccCcc---c------------------CCccccEEEEcHHHeEECCCCCCHH
Confidence            988665 67999999999999999986543221   1                  1489999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN  249 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~  249 (353)
                      +++.+.+.+.+||+++.+ .++.++++|||+|+|++|++++++|+.+|+ +|+++.+++++.+.++++|++.+++..  .
T Consensus       140 ~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~  215 (330)
T cd08245         140 QAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG--A  215 (330)
T ss_pred             HhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccC--C
Confidence            999999999999999855 789999999999888899999999999999 899999999999999999988887764  2


Q ss_pred             ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCCC
Q 018627          250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKT  328 (353)
Q Consensus       250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~  328 (353)
                      ......    ..+++|+++|+++.......++++++++ |+++.+|...... .......+ .++.++.++..+.   ..
T Consensus       216 ~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~  286 (330)
T cd08245         216 ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPP-FSPDIFPLIMKRQSIAGSTHGG---RA  286 (330)
T ss_pred             cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCCc-cccchHHHHhCCCEEEEeccCC---HH
Confidence            222222    2247999999988767889999999997 9999998754321 11212223 4577887776543   35


Q ss_pred             cHHHHHHHHHcCCCCC
Q 018627          329 DLPSLVNRYLKKVRNT  344 (353)
Q Consensus       329 ~~~~~~~~l~~g~i~~  344 (353)
                      .+.++++++.++++.+
T Consensus       287 ~~~~~~~ll~~~~l~~  302 (330)
T cd08245         287 DLQEALDFAAEGKVKP  302 (330)
T ss_pred             HHHHHHHHHHcCCCcc
Confidence            7888999999998864

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1e-34  Score=274.96  Aligned_cols=271  Identities=16%  Similarity=0.183  Sum_probs=210.3

Q ss_pred             eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhc---cC---CCCCcccccceeEEEEEeCCCCCCCCCCCeEEeeccc
Q 018627           25 LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWE---TQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG   97 (353)
Q Consensus        25 l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~---g~---~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~   97 (353)
                      +++.++|.|+|. ++||||||.++|||+.|.....   +.   .++|.++|||++|+|+++|+++++|++||||++..  
T Consensus        23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~--  100 (345)
T cd08293          23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN--  100 (345)
T ss_pred             eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence            899999999975 9999999999999999853221   21   15678999999999999999999999999998641  


Q ss_pred             CCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh----hhh
Q 018627           98 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK----ICL  173 (353)
Q Consensus        98 ~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~----aa~  173 (353)
                                                                      ++|+||++++++.++++|+++++.+    ++.
T Consensus       101 ------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~  132 (345)
T cd08293         101 ------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGA  132 (345)
T ss_pred             ------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhhh
Confidence                                                            2799999999999999999864432    455


Q ss_pred             hchhhhHHHHHHHHhccCCCC--CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCC
Q 018627          174 LSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNN  249 (353)
Q Consensus       174 l~~~~~ta~~al~~~~~~~~g--~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~  249 (353)
                      ++.++.|||+++.+.+++++|  ++|||+|+ |++|++++|+|+++|+++|+++++++++.+.+++ +|+++++++.  +
T Consensus       133 ~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~--~  210 (345)
T cd08293         133 VGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK--T  210 (345)
T ss_pred             cCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC--C
Confidence            667899999998787888877  99999997 9999999999999998679999999999998876 9999998876  4


Q ss_pred             ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC---Cce--ec--chhhhhc--CcEEEeee
Q 018627          250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEV--AA--HYGLFLS--GRTLKGSL  320 (353)
Q Consensus       250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~--~~--~~~~~~~--~~~i~g~~  320 (353)
                      .++.+.+++++++++|++||++|+. .+..++++++++ |+++.+|.....   ...  .+  ....+.+  ++++..+.
T Consensus       211 ~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (345)
T cd08293         211 DNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFL  288 (345)
T ss_pred             CCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEE
Confidence            6788888887666899999999984 578999999997 999999853211   111  11  1111222  44443332


Q ss_pred             cCCCCC--CCcHHHHHHHHHcCCCCCCCCcc
Q 018627          321 FGGWKP--KTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       321 ~~~~~~--~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      ...+..  .+.+.++++++.+|++++...++
T Consensus       289 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~  319 (345)
T cd08293         289 VLNYKDKFEEAIAQLSQWVKEGKLKVKETVY  319 (345)
T ss_pred             eeccHhHHHHHHHHHHHHHHCCCccceeEEe
Confidence            222110  13466788999999998764443

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.7e-34  Score=270.69  Aligned_cols=290  Identities=28%  Similarity=0.332  Sum_probs=230.1

Q ss_pred             eeEEEEecCCCC--eEEEE-eecCCCCCCeEEEEEeeeecchhhhhhhccCC-----------------------CCCcc
Q 018627           13 CKAAVAWGAGQP--LVVEE-VEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----------------------IFPRI   66 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-----------------------~~p~~   66 (353)
                      |||+++.+++.+  +++.+ .+.|++.+++|+|||.++++|++|+..+.|.+                       .+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            678888876643  56654 47788899999999999999999998776532                       35789


Q ss_pred             cccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCcc
Q 018627           67 FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS  146 (353)
Q Consensus        67 ~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g  146 (353)
                      +|||++|+|+++|+++.+|++||||++.+...|+.|..|..     |..     .|.. .                  .|
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~-----~~~~-~------------------~g  131 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY-----IGSE-R------------------DG  131 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----ccc-----cCCC-C------------------Cc
Confidence            99999999999999999999999999988777877665431     210     1100 1                  15


Q ss_pred             ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc
Q 018627          147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      +|++|+.++.+.++++|+++++.+++.+.+++.+||+++ +..++++|++|||+|+ |++|++++++|+++|+ +++++.
T Consensus       132 ~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~  209 (350)
T cd08274         132 GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVA  209 (350)
T ss_pred             cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEe
Confidence            899999999999999999999999999999999999987 7788999999999998 9999999999999999 788887


Q ss_pred             CChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCcee
Q 018627          226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA  304 (353)
Q Consensus       226 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~  304 (353)
                      +++ +.+.++++|++.+++..  ...+.+  ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|.... ....
T Consensus       210 ~~~-~~~~~~~~g~~~~~~~~--~~~~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~  281 (350)
T cd08274         210 GAA-KEEAVRALGADTVILRD--APLLAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAG-PVVE  281 (350)
T ss_pred             Cch-hhHHHHhcCCeEEEeCC--CccHHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCC-cccc
Confidence            665 78888999987555443  333333  344444 89999999997 5789999999997 99999986533 2133


Q ss_pred             cchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627          305 AHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       305 ~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      ++... +.+++++.++....   .+.+.++++++.++++++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~  319 (350)
T cd08274         282 LDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP  319 (350)
T ss_pred             CCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc
Confidence            34444 35688888877543   467899999999998864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=6.1e-34  Score=269.08  Aligned_cols=282  Identities=24%  Similarity=0.325  Sum_probs=232.1

Q ss_pred             eeEEEEecCCCC---eEEEEeecCCCCC-CeEEEEEeeeecchhhhhhhccCCC--------CCcccccceeEEEEEeCC
Q 018627           13 CKAAVAWGAGQP---LVVEEVEVNPPQP-EEIRIKVVCTSLCRSDITAWETQAI--------FPRIFGHEASGIVESVGP   80 (353)
Q Consensus        13 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~eVlVrv~~~~i~~~D~~~~~g~~~--------~p~~~G~e~~G~V~~vG~   80 (353)
                      |||+++.+.+.+   +++++.|.|.|.+ ++|+||+.++++|++|...+.|...        +|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            789999988875   8999999999988 9999999999999999988877642        567999999999999999


Q ss_pred             CCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627           81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (353)
Q Consensus        81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~  160 (353)
                      ++..+++||+|++...                                               ..|+|++|+.++.+.++
T Consensus        81 ~v~~~~~Gd~V~~~~~-----------------------------------------------~~g~~~~~~~v~~~~~~  113 (341)
T cd08290          81 GVKSLKPGDWVIPLRP-----------------------------------------------GLGTWRTHAVVPADDLI  113 (341)
T ss_pred             CCCCCCCCCEEEecCC-----------------------------------------------CCccchheEeccHHHeE
Confidence            9999999999998621                                               01589999999999999


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hhHHHHH
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAK  235 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~----~~~~~~~  235 (353)
                      ++|+++++++++.+++.+.|||+++.....+++|++|||+|+ |++|++++|+|++.|+ +++++.+++    ++.+.++
T Consensus       114 ~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~  192 (341)
T cd08290         114 KVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLK  192 (341)
T ss_pred             eCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHH
Confidence            999999999999999999999999877778999999999987 9999999999999999 677766655    6678888


Q ss_pred             hCCCceEeCCCCCCc---cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hh
Q 018627          236 AFGVTEFLNPNDNNE---PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FL  311 (353)
Q Consensus       236 ~~G~~~~~~~~~~~~---~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~  311 (353)
                      ++|+++++++.  ..   ++.+.++...++++|++|||+|+. .....+++++++ |+++.+|..... ...+.... +.
T Consensus       193 ~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~  267 (341)
T cd08290         193 ALGADHVLTEE--ELRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIF  267 (341)
T ss_pred             hcCCCEEEeCc--ccccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhh
Confidence            89999988775  33   566777766555899999999984 567788999997 999999864432 22233322 45


Q ss_pred             cCcEEEeeecCCCCC---C----CcHHHHHHHHHcCCCCCCCC
Q 018627          312 SGRTLKGSLFGGWKP---K----TDLPSLVNRYLKKVRNTRKP  347 (353)
Q Consensus       312 ~~~~i~g~~~~~~~~---~----~~~~~~~~~l~~g~i~~~~l  347 (353)
                      +++++.+.....+..   .    +.+.++++++.+|++.+...
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  310 (341)
T cd08290         268 KDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPV  310 (341)
T ss_pred             CCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcc
Confidence            689998887654321   1    24778999999999887644

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.9e-33  Score=265.10  Aligned_cols=277  Identities=18%  Similarity=0.198  Sum_probs=223.3

Q ss_pred             eEEEEecC---CCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCC
Q 018627           14 KAAVAWGA---GQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        14 ~a~~~~~~---~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      ||+++.++   +.+  +++.++|.|+|+++||+|||+++++|++|...+.+..   .+|.++|+|++|+|+++|+++.+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            57777775   433  8888999999999999999999999999998776653   457799999999999999999999


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||+|++....                                             ...|+|++|++++.+.++++|++
T Consensus        81 ~~Gd~V~~~~~~---------------------------------------------~~~g~~~~~~~v~~~~~~~ip~~  115 (336)
T TIGR02817        81 KPGDEVWYAGDI---------------------------------------------DRPGSNAEFHLVDERIVGHKPKS  115 (336)
T ss_pred             CCCCEEEEcCCC---------------------------------------------CCCCcccceEEEcHHHcccCCCC
Confidence            999999875200                                             01258999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCC-----CCEEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~-----g~~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      +++++++.+++++.|||+++.+..++++     |++|||+|+ |++|++++|+|+++ |+ +|+++.+++++.+.++++|
T Consensus       116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g  194 (336)
T TIGR02817       116 LSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELG  194 (336)
T ss_pred             CCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcC
Confidence            9999999999999999999878788877     999999987 99999999999998 99 8999989999999999999


Q ss_pred             CceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEE
Q 018627          239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLK  317 (353)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~  317 (353)
                      +++++++.   .++.+.+++...+++|+++|++++...+...+++++++ |+++.++..   ..++.  ..+. +++++.
T Consensus       195 ~~~~~~~~---~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~~~~~--~~~~~~~~~~~  265 (336)
T TIGR02817       195 AHHVIDHS---KPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---AELDI--SPFKRKSISLH  265 (336)
T ss_pred             CCEEEECC---CCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---ccccc--hhhhhcceEEE
Confidence            99988764   25677777654448999999987667889999999997 999998532   22222  2223 346665


Q ss_pred             eeecC--CCCC-------CCcHHHHHHHHHcCCCCCC
Q 018627          318 GSLFG--GWKP-------KTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       318 g~~~~--~~~~-------~~~~~~~~~~l~~g~i~~~  345 (353)
                      +....  ....       ...+.++++++.++++++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~  302 (336)
T TIGR02817       266 WEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT  302 (336)
T ss_pred             EEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc
Confidence            43322  1110       1347789999999988753

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.6e-33  Score=260.32  Aligned_cols=299  Identities=25%  Similarity=0.331  Sum_probs=241.7

Q ss_pred             eeEEEEecCC--CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++...+  +.+++++.+.|.++++||+||+.++++|++|+....+..    ..|.++|||++|+|+.+|+.+.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            7899998664  348888888888999999999999999999998877654    3467899999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++.....|+.|.+      ..|....  +.|..                   ..|+|++|+.++.+.++++|+++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~------~~~~~~~--~~~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~  133 (336)
T cd08276          81 VGDRVVPTFFPNWLDGPP------TAEDEAS--ALGGP-------------------IDGVLAEYVVLPEEGLVRAPDHL  133 (336)
T ss_pred             CCCEEEEecccccccccc------ccccccc--ccccc-------------------cCceeeeEEEecHHHeEECCCCC
Confidence            999999987666544333      3332211  11111                   12589999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++.+++.+.+.+.+||+++.+...+++|++|+|+|+|++|+++++++++.|+ +|+++++++++.+.++++|++.+++..
T Consensus       134 ~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  212 (336)
T cd08276         134 SFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYR  212 (336)
T ss_pred             CHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCC
Confidence            9999999999999999998777889999999999879999999999999999 799999999999999999999888765


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                      . +.++.+.++..+++ ++|+++|+++. ..+..++++++++ |+++.+|..............+.+++++.++..+.  
T Consensus       213 ~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  287 (336)
T cd08276         213 T-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS--  287 (336)
T ss_pred             c-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc--
Confidence            2 25677788887776 99999999985 6788999999997 99999997654221111222245699998887554  


Q ss_pred             CCCcHHHHHHHHHcCCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~~  345 (353)
                       .+.+.++++++.++.+.+.
T Consensus       288 -~~~~~~~~~l~~~~~l~~~  306 (336)
T cd08276         288 -RAQFEAMNRAIEAHRIRPV  306 (336)
T ss_pred             -HHHHHHHHHHHHcCCcccc
Confidence             4578889999988887653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.5e-33  Score=255.14  Aligned_cols=266  Identities=31%  Similarity=0.481  Sum_probs=221.7

Q ss_pred             eEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcc
Q 018627           39 EIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE  114 (353)
Q Consensus        39 eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~  114 (353)
                      ||+|||.++++|+.|+..+.+..    .+|.++|+|++|+|+++|+++..|++||+|++.+...|+.|..|+.    .|.
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~   76 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP   76 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence            69999999999999999887753    3578999999999999999999999999999999999999999997    676


Q ss_pred             cccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCC
Q 018627          115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKG  194 (353)
Q Consensus       115 ~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g  194 (353)
                      +.......                     ..|+|++|+.++.+.++++|+++++++++.+++++.+||+++.+...+.++
T Consensus        77 ~~~~~~~~---------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~  135 (271)
T cd05188          77 GGGILGEG---------------------LDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPG  135 (271)
T ss_pred             CCCEeccc---------------------cCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCC
Confidence            65532111                     125899999999999999999999999999989999999998777777999


Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD  273 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~  273 (353)
                      ++|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.++++.  ..++.+.+. ...+ ++|+++++++.
T Consensus       136 ~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~-~~~~~~~d~vi~~~~~  211 (271)
T cd05188         136 DTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR-LTGGGGADVVIDAVGG  211 (271)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH-HhcCCCCCEEEECCCC
Confidence            999999986699999999999998 999999999999999999988888765  445555555 4444 89999999997


Q ss_pred             hHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCcHHHHHHHH
Q 018627          274 TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRY  337 (353)
Q Consensus       274 ~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~l  337 (353)
                      ......++++++++ |+++.+|..............+.+++++.++..+.+   ++++++++++
T Consensus       212 ~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  271 (271)
T cd05188         212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDLL  271 (271)
T ss_pred             HHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhhC
Confidence            56788899999996 999999987654333333344567999999887653   5777777653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=7e-33  Score=260.37  Aligned_cols=284  Identities=21%  Similarity=0.259  Sum_probs=227.1

Q ss_pred             eeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCC
Q 018627           12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        12 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      +|+++++.+++.+  ++++++|.|+++++||+||+.++++|++|+....+.+   .+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            5899999887654  9999999999999999999999999999998877654   3567899999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|+....                                               ..|+|++|+.++.+.++++|+++
T Consensus        81 ~Gd~V~~~~~-----------------------------------------------~~g~~~~~v~v~~~~~~~lp~~~  113 (327)
T PRK10754         81 VGDRVVYAQS-----------------------------------------------ALGAYSSVHNVPADKAAILPDAI  113 (327)
T ss_pred             CCCEEEECCC-----------------------------------------------CCcceeeEEEcCHHHceeCCCCC
Confidence            9999985410                                               02489999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++++++.++..+.++|.++.+...+.+|++|+|+|+ |.+|++++++|+++|+ +|+++++++++.+.++++|++++++.
T Consensus       114 ~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~  192 (327)
T PRK10754        114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINY  192 (327)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcC
Confidence            999999988899999999877788999999999976 9999999999999999 88888899999999999999888876


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhc-CcEE-E-eeec
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLS-GRTL-K-GSLF  321 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i-~-g~~~  321 (353)
                      +  ..++.+.++..+++ ++|++|||+++ ......+++++++ |+++.+|..... ...+....+.+ +..+ . ....
T Consensus       193 ~--~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  267 (327)
T PRK10754        193 R--EENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGP-VTGVNLGILNQKGSLYVTRPSLQ  267 (327)
T ss_pred             C--CCcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCC-CCCcCHHHHhccCceEEecceee
Confidence            5  56677888888776 89999999987 5678899999997 999999976431 11122221112 2111 1 1111


Q ss_pred             CCCCCC----CcHHHHHHHHHcCCCCCCCCc
Q 018627          322 GGWKPK----TDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       322 ~~~~~~----~~~~~~~~~l~~g~i~~~~li  348 (353)
                      ..+...    +.+.++++++++|++++..++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~  298 (327)
T PRK10754        268 GYITTREELTEASNELFSLIASGVIKVDVAE  298 (327)
T ss_pred             cccCCHHHHHHHHHHHHHHHHCCCeeeeccc
Confidence            111111    224567899999998865443

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-32  Score=256.10  Aligned_cols=279  Identities=20%  Similarity=0.274  Sum_probs=228.6

Q ss_pred             eeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCC
Q 018627           12 TCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        12 ~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      ||||+++.+++.  .+++.+.+.|++.++||+|||.++++|+.|...+.+..    ..|.++|+|++|+|+++|+++..+
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            699999988775  37778888888999999999999999999988877644    234689999999999999999999


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||+|+++..                                                .|+|++|++++.+.++++|++
T Consensus        81 ~~Gd~V~~~~~------------------------------------------------~g~~~~~~~v~~~~~~~ip~~  112 (334)
T PTZ00354         81 KEGDRVMALLP------------------------------------------------GGGYAEYAVAHKGHVMHIPQG  112 (334)
T ss_pred             CCCCEEEEecC------------------------------------------------CCceeeEEEecHHHcEeCCCC
Confidence            99999988621                                                148999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      +++.+++.+.+++.+||+++.+...+++|++|||+|+ |.+|++++++|+++|+ .++.+.+++++.+.++++|++.+++
T Consensus       113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  191 (334)
T PTZ00354        113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIR  191 (334)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence            9999999999999999999878788999999999996 9999999999999999 6677888999999999999988887


Q ss_pred             CCCCCcc-HHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCcee-cchhhh-hcCcEEEeee
Q 018627          245 PNDNNEP-VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-AHYGLF-LSGRTLKGSL  320 (353)
Q Consensus       245 ~~~~~~~-~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~-~~~~~i~g~~  320 (353)
                      +.  ..+ +.+.++..+++ ++|++||++++ ..+..++++++++ |+++.+|.... ..+. +....+ .++.++.++.
T Consensus       192 ~~--~~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  266 (334)
T PTZ00354        192 YP--DEEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFST  266 (334)
T ss_pred             cC--ChhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeee
Confidence            65  333 67777777765 89999999986 6788999999997 99999986543 2222 333333 3466888776


Q ss_pred             cCCCCCC-------CcHHHHHHHHHcCCCCC
Q 018627          321 FGGWKPK-------TDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       321 ~~~~~~~-------~~~~~~~~~l~~g~i~~  344 (353)
                      .......       +.+.+++++++++++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  297 (334)
T PTZ00354        267 LRSRSDEYKADLVASFEREVLPYMEEGEIKP  297 (334)
T ss_pred             ccccchhhhHHHHHHHHHHHHHHHHCCCccC
Confidence            5442111       22467888999998764

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=3.2e-32  Score=255.05  Aligned_cols=279  Identities=22%  Similarity=0.242  Sum_probs=229.3

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      |||+++++++.+  +++.+.+.|.+.+++|+||+.++++|++|+..+.|..      ..|.++|||++|+|+++|+++..
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            689998876543  7777888888899999999999999999998876643      34578999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      +++||+|++....                            .                  .|+|++|++++.+.++++|+
T Consensus        81 ~~~Gd~V~~~~~~----------------------------~------------------~g~~~~~~~v~~~~~~~lp~  114 (324)
T cd08244          81 AWLGRRVVAHTGR----------------------------A------------------GGGYAELAVADVDSLHPVPD  114 (324)
T ss_pred             CCCCCEEEEccCC----------------------------C------------------CceeeEEEEEchHHeEeCCC
Confidence            9999999986210                            0                  24899999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      ++++++++.+++.+.||| ++.+..+++++++|||+|+ |++|++++++|+++|+ +|+++.+++++.+.++++|++.++
T Consensus       115 ~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  192 (324)
T cd08244         115 GLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAV  192 (324)
T ss_pred             CCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence            999999999999999995 5567788999999999996 9999999999999999 899999999999999999998888


Q ss_pred             CCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeec
Q 018627          244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLF  321 (353)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~  321 (353)
                      ++.  +.++.+.+.+..++ ++|+++|++|+. ....++++++++ |+++.+|...... ..++... +.+++++.++..
T Consensus       193 ~~~--~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~  267 (324)
T cd08244         193 DYT--RPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLLG  267 (324)
T ss_pred             ecC--CccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEeec
Confidence            775  45677777777766 899999999985 568899999996 9999999765422 2334222 345888887765


Q ss_pred             CCCCC---CCcHHHHHHHHHcCCCCC
Q 018627          322 GGWKP---KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       322 ~~~~~---~~~~~~~~~~l~~g~i~~  344 (353)
                      ....+   .+.+.+++++++++++.+
T Consensus       268 ~~~~~~~~~~~~~~~~~~l~~~~l~~  293 (324)
T cd08244         268 VQAERGGLRALEARALAEAAAGRLVP  293 (324)
T ss_pred             ccCCHHHHHHHHHHHHHHHHCCCccC
Confidence            44321   245777889999998864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=1.4e-32  Score=258.49  Aligned_cols=278  Identities=24%  Similarity=0.303  Sum_probs=229.0

Q ss_pred             eeeEEEEecCCC----CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCC
Q 018627           12 TCKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus        12 ~~~a~~~~~~~~----~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      .|||+++.+++.    ++++++++.|.+.++||+|||.++++|++|+..+.|..    .+|.++|+|++|+|+.+|+++.
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            489999988765    49999999999999999999999999999998876643    5678999999999999999999


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      ++++||+|++..                                                 .|+|++|++++.+.++++|
T Consensus        81 ~~~~Gd~V~~~~-------------------------------------------------~g~~~s~~~v~~~~~~~ip  111 (329)
T cd08250          81 DFKVGDAVATMS-------------------------------------------------FGAFAEYQVVPARHAVPVP  111 (329)
T ss_pred             CCCCCCEEEEec-------------------------------------------------CcceeEEEEechHHeEECC
Confidence            999999999862                                                 1489999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      ++  +.+++.+.+++.+||+++.+..++++|++|||+|+ |.+|++++++|++.|+ +|+++.+++++.+.++++|++.+
T Consensus       112 ~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v  188 (329)
T cd08250         112 EL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRP  188 (329)
T ss_pred             CC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceE
Confidence            97  35677888899999999877788999999999996 9999999999999999 89998899999999999999888


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC---------ceecchhhhhcC
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP---------EVAAHYGLFLSG  313 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---------~~~~~~~~~~~~  313 (353)
                      ++..  ..++.+.+....++++|++||++|+ ..+..++++++++ |+++.+|......         ...+....+.++
T Consensus       189 ~~~~--~~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (329)
T cd08250         189 INYK--TEDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKS  264 (329)
T ss_pred             EeCC--CccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcC
Confidence            7765  4556666666554589999999996 6788999999996 9999998764321         112223334568


Q ss_pred             cEEEeeecCCCC--CCCcHHHHHHHHHcCCCCCC
Q 018627          314 RTLKGSLFGGWK--PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       314 ~~i~g~~~~~~~--~~~~~~~~~~~l~~g~i~~~  345 (353)
                      +++.++....+.  ..+.+.++++++.++.+++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  298 (329)
T cd08250         265 ASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCE  298 (329)
T ss_pred             ceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeee
Confidence            888887654321  12457788899999988764

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=2.6e-32  Score=258.11  Aligned_cols=285  Identities=26%  Similarity=0.308  Sum_probs=227.1

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |+|+++.+++ ..++++++|.|+|+++||+||+.++++|++|+....+..  .+|.++|||++|+|+.+|+++..+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVGSGVTRFKVGD   80 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccccCCCceeeeeeeEEEEEeCCCcCcCCCCC
Confidence            7899999885 348999999999999999999999999999988765542  4678999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      +|++++...|+                     +.                   ...|+|++|++++.+.++++|++++++
T Consensus        81 ~V~~~~~~~~~---------------------~~-------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~  120 (339)
T cd08249          81 RVAGFVHGGNP---------------------ND-------------------PRNGAFQEYVVADADLTAKIPDNISFE  120 (339)
T ss_pred             EEEEEeccccC---------------------CC-------------------CCCCcccceEEechhheEECCCCCCHH
Confidence            99987543221                     00                   012589999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccC----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADI----------SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~----------~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      +++.+++.+.+||+++.+..++          .+++++||+|+ |.+|++++++|+++|+ +|+++. ++++.+.++++|
T Consensus       121 ~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g  198 (339)
T cd08249         121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLG  198 (339)
T ss_pred             HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcC
Confidence            9999999999999998666544          78999999997 8999999999999999 787776 568889999999


Q ss_pred             CceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhcc--CCceEEEEcCCCCCCceecchhhhhcCcEE
Q 018627          239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD--GWGLAVTLGVPKLKPEVAAHYGLFLSGRTL  316 (353)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i  316 (353)
                      +++++++.  ..++.+.+++.+++++|++||++|.+..+..+++++++  + |+++.+|......  .     +..+..+
T Consensus       199 ~~~v~~~~--~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~-----~~~~~~~  268 (339)
T cd08249         199 ADAVFDYH--DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--E-----PRKGVKV  268 (339)
T ss_pred             CCEEEECC--CchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--c-----CCCCceE
Confidence            98888876  46677788777666899999999976778999999999  8 9999998765422  0     1112222


Q ss_pred             EeeecCC---------CCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          317 KGSLFGG---------WKPKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       317 ~g~~~~~---------~~~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      .......         ......+.+++++++++++.+.++.+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  310 (339)
T cd08249         269 KFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRV  310 (339)
T ss_pred             EEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCcee
Confidence            2211111         11123466788999999998765544

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.1e-31  Score=249.49  Aligned_cols=269  Identities=21%  Similarity=0.261  Sum_probs=219.6

Q ss_pred             eeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627           13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV   91 (353)
Q Consensus        13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V   91 (353)
                      ||++++.+.+ ..+++++.|.|.++++||+||+.++++|+.|.+..... ..|.++|||++|+|+++|+++..|++||+|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V   79 (305)
T cd08270           1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER-PDGAVPGWDAAGVVERAAADGSGPAVGARV   79 (305)
T ss_pred             CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-CCCCcccceeEEEEEEeCCCCCCCCCCCEE
Confidence            6788887754 12778899999999999999999999999998876533 457889999999999999999999999999


Q ss_pred             EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhh
Q 018627           92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI  171 (353)
Q Consensus        92 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~a  171 (353)
                      ++...                                                .|+|++|+.++.+.++++|++++++++
T Consensus        80 ~~~~~------------------------------------------------~g~~~~~~~v~~~~~~~ip~~~~~~~a  111 (305)
T cd08270          80 VGLGA------------------------------------------------MGAWAELVAVPTGWLAVLPDGVSFAQA  111 (305)
T ss_pred             EEecC------------------------------------------------CcceeeEEEEchHHeEECCCCCCHHHH
Confidence            88620                                                148999999999999999999999999


Q ss_pred             hhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       172 a~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      +.+++.+.+||+++.+.... +|++|+|+|+ |++|++++++|++.|+ +|+.+.+++++.+.++++|++..++..   .
T Consensus       112 ~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~  186 (305)
T cd08270         112 ATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG---S  186 (305)
T ss_pred             HHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc---c
Confidence            99999999999998665544 5999999998 9999999999999999 899998999999999999987655332   1


Q ss_pred             cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh---cCcEEEeeecCC-CCC
Q 018627          251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL---SGRTLKGSLFGG-WKP  326 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~---~~~~i~g~~~~~-~~~  326 (353)
                             +..++++|+++|++|+ ..+..++++++.+ |+++.+|.... ....+....+.   ++.++.++.... ...
T Consensus       187 -------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (305)
T cd08270         187 -------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSSG-EPAVFNPAAFVGGGGGRRLYTFFLYDGEPL  256 (305)
T ss_pred             -------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccCC-CcccccHHHHhcccccceEEEEEccCHHHH
Confidence                   1122479999999997 4688999999997 99999997643 22333444343   388888877653 112


Q ss_pred             CCcHHHHHHHHHcCCCCCC
Q 018627          327 KTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       327 ~~~~~~~~~~l~~g~i~~~  345 (353)
                      .+.+..++++++++++++.
T Consensus       257 ~~~~~~~~~~~~~~~i~~~  275 (305)
T cd08270         257 AADLARLLGLVAAGRLDPR  275 (305)
T ss_pred             HHHHHHHHHHHHCCCccce
Confidence            3568889999999999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.3e-31  Score=250.96  Aligned_cols=267  Identities=23%  Similarity=0.336  Sum_probs=226.1

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCC
Q 018627           25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECK  100 (353)
Q Consensus        25 l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~  100 (353)
                      +++++.|.|.+.+++|+||++++++|+.|...+.+..    .+|.++|+|++|+|+.+|+++..+++||+|++.+.    
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----   89 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG----   89 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence            7788888999999999999999999999998876654    34679999999999999999999999999998731    


Q ss_pred             CCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhH
Q 018627          101 TCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA  180 (353)
Q Consensus       101 ~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~t  180 (353)
                                                +                  |+|++|+.++...++++|+++++.+++.+++.+.+
T Consensus        90 --------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~t  125 (323)
T cd05282          90 --------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLT  125 (323)
T ss_pred             --------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHH
Confidence                                      1                  48999999999999999999999999999999999


Q ss_pred             HHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHH
Q 018627          181 GLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       181 a~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~  259 (353)
                      ||+++.+...+.+|++|||+|+ |.+|++++++|+++|+ .++++.+++++.+.++++|++.++++.  ..++.+.+.+.
T Consensus       126 a~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~  202 (323)
T cd05282         126 AWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSS--PEDLAQRVKEA  202 (323)
T ss_pred             HHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEeccc--chhHHHHHHHH
Confidence            9999878778899999999987 8999999999999999 888888889999999999999888876  45677778777


Q ss_pred             hcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-cCcEEEeeecCCCCC-------CCcH
Q 018627          260 TDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKP-------KTDL  330 (353)
Q Consensus       260 ~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~~  330 (353)
                      +++ ++|++|||+|+. .....+++++++ |+++.+|..... ...+....+. +++++.++....+..       .+.+
T Consensus       203 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (323)
T cd05282         203 TGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETF  279 (323)
T ss_pred             hcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHH
Confidence            776 999999999984 467889999996 999999876553 3344444445 789998887665532       1347


Q ss_pred             HHHHHHHHcCCCCCC
Q 018627          331 PSLVNRYLKKVRNTR  345 (353)
Q Consensus       331 ~~~~~~l~~g~i~~~  345 (353)
                      .++++++.++++.+.
T Consensus       280 ~~~~~~l~~~~l~~~  294 (323)
T cd05282         280 AEVIKLVEAGVLTTP  294 (323)
T ss_pred             HHHHHHHhCCCcccC
Confidence            788899999988753

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=2.4e-31  Score=250.66  Aligned_cols=279  Identities=20%  Similarity=0.191  Sum_probs=227.5

Q ss_pred             eeEEEEecCCCC-----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCC
Q 018627           13 CKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        13 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      |+|+++.+++.+     ++++++|.|.+.+++|+||+.++++|++|+..+.+..   .+|.++|||++|+|+.+|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            579999888763     6677888888999999999999999999998876654   36779999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      +++||+|+......                           .                  .|+|++|+.++...++++|+
T Consensus        81 ~~~Gd~V~~~~~~~---------------------------~------------------~g~~~~~~~v~~~~~~~ip~  115 (336)
T cd08252          81 FKVGDEVYYAGDIT---------------------------R------------------PGSNAEYQLVDERIVGHKPK  115 (336)
T ss_pred             CCCCCEEEEcCCCC---------------------------C------------------CccceEEEEEchHHeeeCCC
Confidence            99999998752100                           1                  24899999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCC-----CCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~-----g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~  237 (353)
                      ++++++++.+++.+.+||.++.+...+.+     |++|+|+|+ |++|++++++|+.+| + +|+++++++++.+.++++
T Consensus       116 ~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~  194 (336)
T cd08252         116 SLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKEL  194 (336)
T ss_pred             CCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhc
Confidence            99999999999999999999877788877     999999986 999999999999999 7 899999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEE
Q 018627          238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTL  316 (353)
Q Consensus       238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i  316 (353)
                      |++.++++.  . ++.+.++....+++|++||++|.+..+..++++++++ |+++.+|...  ..+  +...+ .+++++
T Consensus       195 g~~~~~~~~--~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~--~~~~~~~~~~~~  266 (336)
T cd08252         195 GADHVINHH--Q-DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--EPL--DLGPLKSKSASF  266 (336)
T ss_pred             CCcEEEeCC--c-cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--Ccc--cchhhhcccceE
Confidence            998888765  2 4556666443348999999999767889999999996 9999998653  222  23333 468888


Q ss_pred             EeeecCCCC--C-------CCcHHHHHHHHHcCCCCCC
Q 018627          317 KGSLFGGWK--P-------KTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       317 ~g~~~~~~~--~-------~~~~~~~~~~l~~g~i~~~  345 (353)
                      .+.....+.  .       .+.+.++++++.+|++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  304 (336)
T cd08252         267 HWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT  304 (336)
T ss_pred             EEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence            776543211  1       1236788999999988754

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=3.1e-31  Score=248.56  Aligned_cols=260  Identities=20%  Similarity=0.253  Sum_probs=209.4

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++++++.  +++++++|.|.++++||+||+.++++|++|+..+.|..    .+|.++|||++|+|+++  ++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            78999998875  69999999999999999999999999999998887764    24789999999999998  456799


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++.+..                       .|..                   ..|+|++|++++++.++++|+++
T Consensus        79 ~Gd~V~~~~~~-----------------------~g~~-------------------~~g~~~~~~~v~~~~~~~lp~~~  116 (325)
T cd05280          79 EGDEVLVTGYD-----------------------LGMN-------------------TDGGFAEYVRVPADWVVPLPEGL  116 (325)
T ss_pred             CCCEEEEcccc-----------------------cCCC-------------------CCceeEEEEEEchhhEEECCCCC
Confidence            99999986310                       0111                   12589999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhc--cCC-CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVA--DIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~--~~~-~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      ++++++.+++.+.++++++....  ++. .+++|||+|+ |.+|++++++|+++|+ +|+++++++++.+.++++|++.+
T Consensus       117 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~  195 (325)
T cd05280         117 SLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEV  195 (325)
T ss_pred             CHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEE
Confidence            99999999999999999885543  335 3579999998 9999999999999999 79999999999999999999888


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeec
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF  321 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~  321 (353)
                      ++...  . .....+....+++|++||++|+ ..+..++++++++ |+++.+|..... ...+.+..+ .+++++.+...
T Consensus       196 ~~~~~--~-~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~  269 (325)
T cd05280         196 LDRED--L-LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGIDS  269 (325)
T ss_pred             Ecchh--H-HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEEe
Confidence            87642  1 1222233333489999999997 5789999999997 999999976442 223333334 46888888765


Q ss_pred             CC
Q 018627          322 GG  323 (353)
Q Consensus       322 ~~  323 (353)
                      ..
T Consensus       270 ~~  271 (325)
T cd05280         270 VN  271 (325)
T ss_pred             ec
Confidence            43

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.1e-31  Score=246.29  Aligned_cols=270  Identities=25%  Similarity=0.364  Sum_probs=220.1

Q ss_pred             cCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhh-ccCC-----CCCcccccceeEEEEEeCCCCCCCCCCCeEEe
Q 018627           20 GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQA-----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLT   93 (353)
Q Consensus        20 ~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~-~g~~-----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~   93 (353)
                      ++++ +++++++.|++.++||+||+.++++|++|+..+ .+..     .+|.++|+|++|+|+.+|+++.++++||+|++
T Consensus         3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   81 (312)
T cd08269           3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG   81 (312)
T ss_pred             CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence            3444 999999999999999999999999999998877 5543     13779999999999999999999999999998


Q ss_pred             ecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhh
Q 018627           94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL  173 (353)
Q Consensus        94 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~  173 (353)
                      +.                                                 .|+|++|++++++.++++|+++  .+++.
T Consensus        82 ~~-------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~  110 (312)
T cd08269          82 LS-------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAF  110 (312)
T ss_pred             ec-------------------------------------------------CCcceeeEEEchhheEECCCch--hhhHH
Confidence            62                                                 1489999999999999999988  33333


Q ss_pred             hchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHH
Q 018627          174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ  253 (353)
Q Consensus       174 l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~  253 (353)
                      +..+++++++++. ..+++++++|||+|+|.+|++++++|+++|++.|+++.+++++.++++++|++.++++.  ..++.
T Consensus       111 ~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~  187 (312)
T cd08269         111 PGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDD--SEAIV  187 (312)
T ss_pred             hhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCC--CcCHH
Confidence            3368889999875 78899999999998799999999999999994399998999999999999998888765  56678


Q ss_pred             HHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCC-CCCcH
Q 018627          254 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK-PKTDL  330 (353)
Q Consensus       254 ~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~-~~~~~  330 (353)
                      +.+.+.+++ ++|+++||+|....+..++++++++ |+++.+|.... ...++.... .++++.+.++...... ..+.+
T Consensus       188 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (312)
T cd08269         188 ERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQD-GPRPVPFQTWNWKGIDLINAVERDPRIGLEGM  265 (312)
T ss_pred             HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC-CCcccCHHHHhhcCCEEEEecccCccchhhHH
Confidence            888887776 9999999998767789999999997 99999997542 222333222 3567777766533321 23678


Q ss_pred             HHHHHHHHcCCCCCCC
Q 018627          331 PSLVNRYLKKVRNTRK  346 (353)
Q Consensus       331 ~~~~~~l~~g~i~~~~  346 (353)
                      ++++++++++++++.+
T Consensus       266 ~~~~~~~~~~~l~~~~  281 (312)
T cd08269         266 REAVKLIADGRLDLGS  281 (312)
T ss_pred             HHHHHHHHcCCCCchh
Confidence            9999999999988644

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.7e-31  Score=247.01  Aligned_cols=281  Identities=25%  Similarity=0.324  Sum_probs=224.8

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      ||++++.+.+.  .+++.+.+.|.++++||+||+.++++|++|+..+.+..   ..|.++|||++|+|+++|.  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            67888877664  37778888888999999999999999999998887653   4568899999999999995  57999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      ||+|+++...-                       +                   ....|+|++|+.++...++++|++++
T Consensus        79 Gd~V~~~~~~~-----------------------~-------------------~~~~g~~~~~~~~~~~~~~~ip~~~~  116 (320)
T cd08243          79 GQRVATAMGGM-----------------------G-------------------RTFDGSYAEYTLVPNEQVYAIDSDLS  116 (320)
T ss_pred             CCEEEEecCCC-----------------------C-------------------CCCCcccceEEEcCHHHcEeCCCCCC
Confidence            99999873210                       0                   00125899999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      +++++.+++++.+||+++.+...+.+|++|||+|+ |++|++++++|+++|+ +|+++.+++++.+.++++|++++++. 
T Consensus       117 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-  194 (320)
T cd08243         117 WAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-  194 (320)
T ss_pred             HHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-
Confidence            99999999999999999988788999999999997 9999999999999999 79999899999999999999887643 


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCce----ecchhhhhcCcEEEeeecC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV----AAHYGLFLSGRTLKGSLFG  322 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~~~~~~~~~~i~g~~~~  322 (353)
                        ..++.+.+++. +.++|+++|++|+ ..+..++++++++ |+++.+|........    ......+.+++++.++...
T Consensus       195 --~~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (320)
T cd08243         195 --DGAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSG  269 (320)
T ss_pred             --CccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchh
Confidence              34667777776 5599999999997 6788999999997 999999975332211    1111112357777666543


Q ss_pred             CCCCCCcHHHHHHHHHcCCCCCC
Q 018627          323 GWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      ... .+.+.+++++++.+++++.
T Consensus       270 ~~~-~~~~~~~~~~~~~~~~~~~  291 (320)
T cd08243         270 DVP-QTPLQELFDFVAAGHLDIP  291 (320)
T ss_pred             hhh-HHHHHHHHHHHHCCceecc
Confidence            321 2357788999999988753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=7.8e-31  Score=246.16  Aligned_cols=257  Identities=19%  Similarity=0.214  Sum_probs=206.2

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++...+.+  +++++.|.|.|.++||+||+.++++|++|.....+..    .+|.++|||++|+|+++|  +.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            789999887764  8899999999999999999999999999986654221    458899999999999954  56799


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++.+..                       .|.                   ...|+|+||++++++.++++|+++
T Consensus        79 ~Gd~V~~~~~~-----------------------~~~-------------------~~~g~~~~~~~v~~~~~~~~p~~~  116 (326)
T cd08289          79 PGDEVIVTSYD-----------------------LGV-------------------SHHGGYSEYARVPAEWVVPLPKGL  116 (326)
T ss_pred             CCCEEEEcccc-----------------------cCC-------------------CCCCcceeEEEEcHHHeEECCCCC
Confidence            99999986320                       010                   012599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhc--c-CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVA--D-ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~--~-~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      ++++++.+++.+.||+.++....  . ...+++|||+|+ |++|++++|+|+++|+ +|+++.+++++.+.++++|++.+
T Consensus       117 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v  195 (326)
T cd08289         117 TLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEV  195 (326)
T ss_pred             CHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEE
Confidence            99999999999999998875432  2 335789999998 9999999999999999 89999999999999999999888


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeee
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSL  320 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  320 (353)
                      ++.++  . ..+.++...++++|++||++|. ..+..++++++++ |+++.+|.... ..++.....+ .+++++.+..
T Consensus       196 ~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  268 (326)
T cd08289         196 IPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGID  268 (326)
T ss_pred             Ecchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEE
Confidence            87652  2 3445555544489999999997 6788999999997 99999997643 2223223333 5688888875

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=9.3e-31  Score=245.42  Aligned_cols=277  Identities=20%  Similarity=0.218  Sum_probs=215.0

Q ss_pred             eEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        14 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      ||+++...+.+  ++++++|.|.+.++||+||++++++|++|+..+.|..    .+|.++|||++|+|+.  +++..|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            57788776653  7899999999999999999999999999998887754    4478999999999998  55678999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      ||+|++.+...                       |.                   ...|+|++|+.++.+.++++|++++
T Consensus        79 Gd~V~~~~~~~-----------------------~~-------------------~~~g~~~~~~~~~~~~~~~iP~~~~  116 (323)
T TIGR02823        79 GDEVIVTGYGL-----------------------GV-------------------SHDGGYSQYARVPADWLVPLPEGLS  116 (323)
T ss_pred             CCEEEEccCCC-----------------------CC-------------------CCCccceEEEEEchhheEECCCCCC
Confidence            99999863210                       00                   0125899999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHh--ccCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          168 LEKICLLSCGLSAGLGAAWNV--ADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~--~~~~~g~-~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      +++++.+++.+.+++.++...  ..+.+|+ +|||+|+ |.+|++++++|+++|+ +++++.+++++.+.++++|++.++
T Consensus       117 ~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~  195 (323)
T TIGR02823       117 LREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVI  195 (323)
T ss_pred             HHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEE
Confidence            999999999999998876433  3478898 9999998 9999999999999999 788777888888999999998888


Q ss_pred             CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecC
Q 018627          244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG  322 (353)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  322 (353)
                      +..  +.+.  .++...++++|+++||+|+ ..+..++++++++ |+++.+|.... .........+ .+++++.+....
T Consensus       196 ~~~--~~~~--~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  268 (323)
T TIGR02823       196 DRE--DLSP--PGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDSV  268 (323)
T ss_pred             ccc--cHHH--HHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEecc
Confidence            764  2222  3444444479999999997 4688999999997 99999997643 2233332333 568888886544


Q ss_pred             CCCCCC----cHHHHHHHHHcCCCC
Q 018627          323 GWKPKT----DLPSLVNRYLKKVRN  343 (353)
Q Consensus       323 ~~~~~~----~~~~~~~~l~~g~i~  343 (353)
                      ... .+    .+..+.+++..++++
T Consensus       269 ~~~-~~~~~~~~~~~~~~~~~~~~~  292 (323)
T TIGR02823       269 YCP-MALREAAWQRLATDLKPRNLE  292 (323)
T ss_pred             ccC-chhHHHHHHHHHHHhhcCCCc
Confidence            221 12    244555666677664

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=7.5e-31  Score=246.57  Aligned_cols=279  Identities=19%  Similarity=0.198  Sum_probs=222.1

Q ss_pred             eeEEEEecCCC------CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--C----CCcccccceeEEEEEeCC
Q 018627           13 CKAAVAWGAGQ------PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--I----FPRIFGHEASGIVESVGP   80 (353)
Q Consensus        13 ~~a~~~~~~~~------~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~----~p~~~G~e~~G~V~~vG~   80 (353)
                      .|||++.+.++      .++++++|.|++.+++|+||+.++++|+.|.....+..  .    .+.++|+|++|+|+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            46777764431      29999999999999999999999999998765444321  1    245789999999999996


Q ss_pred             CCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeC-Cce
Q 018627           81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCA  159 (353)
Q Consensus        81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~-~~v  159 (353)
                      .  ++++||||+++                                                   ++|++|+.++. +.+
T Consensus        82 ~--~~~~Gd~V~~~---------------------------------------------------~~~~~~~~v~~~~~~  108 (329)
T cd05288          82 P--DFKVGDLVSGF---------------------------------------------------LGWQEYAVVDGASGL  108 (329)
T ss_pred             C--CCCCCCEEecc---------------------------------------------------cceEEEEEecchhhc
Confidence            4  79999999875                                                   37999999999 999


Q ss_pred             EECCCCCC--hhhhhh-hchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH
Q 018627          160 VKVSSIAP--LEKICL-LSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK  235 (353)
Q Consensus       160 ~~iP~~l~--~~~aa~-l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~  235 (353)
                      +++|++++  +.+++. +++++.+||+++.+...+.++++|||+|+ |++|++++++|++.|+ +|+++.+++++.+.++
T Consensus       109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~  187 (329)
T cd05288         109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV  187 (329)
T ss_pred             EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            99999985  445555 88899999999877788999999999996 9999999999999999 8999989999999998


Q ss_pred             h-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCcee----c-chhh
Q 018627          236 A-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA----A-HYGL  309 (353)
Q Consensus       236 ~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~----~-~~~~  309 (353)
                      + +|++.++++.  +.++.+.+....++++|++|||+|+ ..+..++++++++ |+++.+|.........    + ....
T Consensus       188 ~~~g~~~~~~~~--~~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  263 (329)
T cd05288         188 EELGFDAAINYK--TPDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNI  263 (329)
T ss_pred             hhcCCceEEecC--ChhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHH
Confidence            8 9998888876  4456777776665689999999997 6788999999997 9999998754422111    1 2223


Q ss_pred             hhcCcEEEeeecCCCCC--CCcHHHHHHHHHcCCCCCCCCcc
Q 018627          310 FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       310 ~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      +.++.++.++....+..  .+.+.++++++.+|++++.++.+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~  305 (329)
T cd05288         264 ITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVV  305 (329)
T ss_pred             hhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccccc
Confidence            45688888776543321  14577889999999998776554

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=2.7e-30  Score=240.51  Aligned_cols=278  Identities=26%  Similarity=0.346  Sum_probs=228.7

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+++.+  +++.+.+.|.+.+++|+||+.++++|++|+....+..    .+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            789999876543  7888888888999999999999999999998876643    3568999999999999999998999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|+++..                                                .|+|++|+.++.+.++++|+++
T Consensus        81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~  112 (323)
T cd05276          81 VGDRVCALLA------------------------------------------------GGGYAEYVVVPAGQLLPVPEGL  112 (323)
T ss_pred             CCCEEEEecC------------------------------------------------CCceeEEEEcCHHHhccCCCCC
Confidence            9999998621                                                1489999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++.+++.+..++.++|+++.+...+.++++++|+|+ |++|+++++++++.|+ +|+++.+++++.+.++++|++.+++.
T Consensus       113 ~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (323)
T cd05276         113 SLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINY  191 (323)
T ss_pred             CHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence            999999999999999999877788999999999997 8999999999999999 89999999999999999998887776


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  323 (353)
                      .  ..++.+.+.....+ ++|++|+++|+. ....++++++++ |+++.+|..... ...+....+ .+++++.++....
T Consensus       192 ~--~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  266 (323)
T cd05276         192 R--TEDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLRS  266 (323)
T ss_pred             C--chhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeeccc
Confidence            5  45666777776655 899999999974 477889999996 999999875432 123333333 4688988887654


Q ss_pred             CCCC-------CcHHHHHHHHHcCCCCC
Q 018627          324 WKPK-------TDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       324 ~~~~-------~~~~~~~~~l~~g~i~~  344 (353)
                      ....       +.+.++++++.++++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (323)
T cd05276         267 RSLEEKAALAAAFREHVWPLFASGRIRP  294 (323)
T ss_pred             hhhhccHHHHHHHHHHHHHHHHCCCccC
Confidence            3111       22467778888888864

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=4.2e-31  Score=234.02  Aligned_cols=262  Identities=20%  Similarity=0.209  Sum_probs=216.2

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeC--CCCCCCCCCCeEEeecc
Q 018627           25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVG--PGVTEFNEGEHVLTVFI   96 (353)
Q Consensus        25 l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG--~~~~~~~vGd~V~~~~~   96 (353)
                      ++++++++|+|++||||+|+.+.+++|.    .+|++      -+|+-+|...+|.++...  +....|++||-|...  
T Consensus        27 F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~--  100 (340)
T COG2130          27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV--  100 (340)
T ss_pred             ceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec--
Confidence            9999999999999999999999999983    23332      678888887776666533  456789999999886  


Q ss_pred             cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh--hhhhhh
Q 018627           97 GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL--EKICLL  174 (353)
Q Consensus        97 ~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~--~~aa~l  174 (353)
                                                                       .+|+||..++.+.+.|+.++.-+  .....+
T Consensus       101 -------------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvL  131 (340)
T COG2130         101 -------------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVL  131 (340)
T ss_pred             -------------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhhc
Confidence                                                             28999999999999999764322  234566


Q ss_pred             chhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccH
Q 018627          175 SCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPV  252 (353)
Q Consensus       175 ~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~  252 (353)
                      ..+..|||.+|.+..++++|++|+|.+| |++|..+.|+||..|+ +|+++..+++|.+.+++ +|++.++||+  .+++
T Consensus       132 GmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk--~~d~  208 (340)
T COG2130         132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYK--AEDF  208 (340)
T ss_pred             CCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecC--cccH
Confidence            6789999999999999999999999987 9999999999999999 99999999999999988 9999999998  5799


Q ss_pred             HHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC------ceecchhhhhcCcEEEeeecCCCCC
Q 018627          253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP------EVAAHYGLFLSGRTLKGSLFGGWKP  326 (353)
Q Consensus       253 ~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~~i~g~~~~~~~~  326 (353)
                      .+.+++.++.++|++||++|+ ..++..+..|+.. +|++.+|.-....      .....+..+.+.+++.|+.....+.
T Consensus       209 ~~~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~  286 (340)
T COG2130         209 AQALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD  286 (340)
T ss_pred             HHHHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhh
Confidence            999999999999999999998 6789999999995 9999999643311      1112233234588999998744332


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCC
Q 018627          327 ---KTDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       327 ---~~~~~~~~~~l~~g~i~~~~  346 (353)
                         .+-++++.+|+++|||+.++
T Consensus       287 ~~~~e~~~~l~~wv~~GKi~~~e  309 (340)
T COG2130         287 QRFPEALRELGGWVKEGKIQYRE  309 (340)
T ss_pred             hhhHHHHHHHHHHHHcCceeeEe
Confidence               24567899999999998765

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=5.6e-31  Score=249.65  Aligned_cols=233  Identities=26%  Similarity=0.327  Sum_probs=196.9

Q ss_pred             eeEEEEecCCCC---eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhccC------------------CCCCcccccc
Q 018627           13 CKAAVAWGAGQP---LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQ------------------AIFPRIFGHE   70 (353)
Q Consensus        13 ~~a~~~~~~~~~---l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~g~------------------~~~p~~~G~e   70 (353)
                      |||+++++.+++   +++++++.|.|. ++||+|||+++++|++|...+.+.                  ..+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            789998888775   899999999994 999999999999999999877652                  2457799999


Q ss_pred             eeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceee
Q 018627           71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE  150 (353)
Q Consensus        71 ~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~  150 (353)
                      ++|+|+.+|+++.++++||||++.+...                                             ..|+|++
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~---------------------------------------------~~g~~~~  115 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPPW---------------------------------------------SQGTHAE  115 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCCC---------------------------------------------CCcccee
Confidence            9999999999999999999999863210                                             1258999


Q ss_pred             eEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCC----CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc
Q 018627          151 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISK----GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       151 ~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~----g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      |+.++++.++++|+++++++++.+++.+.++|+++.+...+.+    |++|+|+|+ |++|++++++|+++|+ +|+++.
T Consensus       116 ~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~  194 (350)
T cd08248         116 YVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTC  194 (350)
T ss_pred             EEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEe
Confidence            9999999999999999999999999999999999877666654    999999996 9999999999999999 788776


Q ss_pred             CChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       226 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ++ ++.+.++++|++.+++..  ..++.+.+..  .+++|++||++|.. ....++++++++ |+++.+|...
T Consensus       195 ~~-~~~~~~~~~g~~~~~~~~--~~~~~~~l~~--~~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~  260 (350)
T cd08248         195 ST-DAIPLVKSLGADDVIDYN--NEDFEEELTE--RGKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPL  260 (350)
T ss_pred             Cc-chHHHHHHhCCceEEECC--ChhHHHHHHh--cCCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCc
Confidence            54 677888999998888765  3345554443  23799999999975 788999999996 9999998653

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.98  E-value=9.5e-30  Score=237.27  Aligned_cols=283  Identities=23%  Similarity=0.310  Sum_probs=226.7

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      ||++++...+.+  +.+.++|.|.+.+++|+|++.++++|++|+....+..    ..|.++|||++|+|+.+|+++.+|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            578887765543  8889999999999999999999999999998776643    4677899999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++.+..                         ..   +               ..|++++|+.++++.++++|+++
T Consensus        81 ~Gd~v~~~~~~-------------------------~~---~---------------~~g~~~~~~~~~~~~~~~ip~~~  117 (325)
T cd08253          81 VGDRVWLTNLG-------------------------WG---R---------------RQGTAAEYVVVPADQLVPLPDGV  117 (325)
T ss_pred             CCCEEEEeccc-------------------------cC---C---------------CCcceeeEEEecHHHcEeCCCCC
Confidence            99999987311                         00   0               02589999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++++++.+++++.+||+++.+..++.+|++++|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++.
T Consensus       118 ~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  196 (325)
T cd08253         118 SFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNY  196 (325)
T ss_pred             CHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            999999999999999999877788999999999997 9999999999999999 89999999999999999999888776


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~  323 (353)
                      .  ..++.+.+.+...+ ++|++++|++. ......+++++++ |+++.+|......  .+.... +.++.++.+.....
T Consensus       197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  270 (325)
T cd08253         197 R--AEDLADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSGGLRG--TIPINPLMAKEASIRGVLLYT  270 (325)
T ss_pred             C--CcCHHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeecCCcC--CCChhHHHhcCceEEeeehhh
Confidence            5  45677777776665 89999999987 4577888999996 9999998754222  233333 34577777665332


Q ss_pred             CCC---CCcHHHHHHHHHcCCCCCC
Q 018627          324 WKP---KTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       324 ~~~---~~~~~~~~~~l~~g~i~~~  345 (353)
                      ...   .+.+.++.+++..+.+++.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~i~~~  295 (325)
T cd08253         271 ATPEERAAAAEAIAAGLADGALRPV  295 (325)
T ss_pred             cCHHHHHHHHHHHHHHHHCCCccCc
Confidence            211   1234456677778877643

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.98  E-value=1.7e-29  Score=234.93  Aligned_cols=278  Identities=26%  Similarity=0.310  Sum_probs=226.4

Q ss_pred             eEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        14 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      +|+.+..++.+  +++.+.+.|.+.+++|+|||.++++|++|+....+..  .+|.++|||++|+|+.+|+++.++++||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGD   80 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCCCCCccCCcceeEEEEEECCCCCCCCCCC
Confidence            46666655543  6777888778899999999999999999998877654  4567899999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      +|+++.                                                ..|+|++|+.++.+.++++|+++++.
T Consensus        81 ~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~  112 (320)
T cd05286          81 RVAYAG------------------------------------------------PPGAYAEYRVVPASRLVKLPDGISDE  112 (320)
T ss_pred             EEEEec------------------------------------------------CCCceeEEEEecHHHceeCCCCCCHH
Confidence            999862                                                01489999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      +++.+...+.++++++.+..++.+|++|||+|+ |++|++++++++++|+ .|+++.+++++.+.++++|++.+++..  
T Consensus       113 ~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--  189 (320)
T cd05286         113 TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR--  189 (320)
T ss_pred             HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--
Confidence            999998899999999878888999999999996 9999999999999999 899998999999999999998888765  


Q ss_pred             CccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCC-
Q 018627          249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWK-  325 (353)
Q Consensus       249 ~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~-  325 (353)
                      ..++.+.+...+.+ ++|++|+|+++ .....++++++++ |+++.+|..... ...++...+ .+++++.+.....+. 
T Consensus       190 ~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (320)
T cd05286         190 DEDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIA  266 (320)
T ss_pred             chhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcC
Confidence            45677777777665 89999999997 5788999999997 999999875542 222333333 468887655433222 


Q ss_pred             CC----CcHHHHHHHHHcCCCCCC
Q 018627          326 PK----TDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       326 ~~----~~~~~~~~~l~~g~i~~~  345 (353)
                      ..    +.+.++++++.++++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~l~~~  290 (320)
T cd05286         267 TREELLARAAELFDAVASGKLKVE  290 (320)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCcCc
Confidence            11    234578889999988754

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=99.97  E-value=1.3e-30  Score=244.42  Aligned_cols=271  Identities=29%  Similarity=0.385  Sum_probs=197.2

Q ss_pred             eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCC-------CCcccccceeEE---EEEeC-CCCCCCCCCCeEEe
Q 018627           25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI-------FPRIFGHEASGI---VESVG-PGVTEFNEGEHVLT   93 (353)
Q Consensus        25 l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~-------~p~~~G~e~~G~---V~~vG-~~~~~~~vGd~V~~   93 (353)
                      ...++.|.|.|++++++|++.++++|+.|+.++.|...       +|.+++.++.|+   +...| ..+..+..||++..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            55678899999999999999999999999999888862       333333333333   33333 22233444554443


Q ss_pred             ecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhh
Q 018627           94 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL  173 (353)
Q Consensus        94 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~  173 (353)
                      ..                                                ..|+|+||..+|...++++|+++++++||+
T Consensus       100 ~~------------------------------------------------~~g~~aey~v~p~~~~~~~P~~l~~~~aa~  131 (347)
T KOG1198|consen  100 FL------------------------------------------------SSGGLAEYVVVPEKLLVKIPESLSFEEAAA  131 (347)
T ss_pred             cc------------------------------------------------CCCceeeEEEcchhhccCCCCccChhhhhc
Confidence            31                                                126999999999999999999999999999


Q ss_pred             hchhhhHHHHHHHHhc------cCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          174 LSCGLSAGLGAAWNVA------DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       174 l~~~~~ta~~al~~~~------~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++.++.|||.+++...      +.++|++|||+|+ |++|++++|+|++.++ ..+++.+++++.++++++|+++++||+
T Consensus       132 ~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~  210 (347)
T KOG1198|consen  132 LPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYK  210 (347)
T ss_pred             CchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCC
Confidence            9999999999999988      8999999999987 8999999999999996 455555899999999999999999998


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-Cceecc-hhhhhcCc-----EEEee
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAH-YGLFLSGR-----TLKGS  319 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~-~~~~~~~~-----~i~g~  319 (353)
                        ++++.+.+++.+.++||+||||+|++ .....+.++... |+...++..... ...... .......+     .+.+.
T Consensus       211 --~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (347)
T KOG1198|consen  211 --DENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGV  286 (347)
T ss_pred             --CHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeecc
Confidence              68899999988855999999999984 566777777775 764444433220 111111 00001111     11111


Q ss_pred             ec---CCCCCCCcHHHHHHHHHcCCCCCCCCc
Q 018627          320 LF---GGWKPKTDLPSLVNRYLKKVRNTRKPS  348 (353)
Q Consensus       320 ~~---~~~~~~~~~~~~~~~l~~g~i~~~~li  348 (353)
                      .+   ......+.+..+.++++.|+|++..-.
T Consensus       287 ~~~~~~~~~~~~~l~~l~~~ie~gkikp~i~~  318 (347)
T KOG1198|consen  287 NYRWLYFVPSAEYLKALVELIEKGKIKPVIDS  318 (347)
T ss_pred             ceeeeeecCCHHHHHHHHHHHHcCcccCCcce
Confidence            10   011123678899999999988875433

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.97  E-value=1.6e-29  Score=237.02  Aligned_cols=280  Identities=15%  Similarity=0.172  Sum_probs=217.9

Q ss_pred             eeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+++.  .+++++.|.|+|+++||+||+.++++|++|...+.+..    .+|.++|||++|+|+.  +++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            78999988775  39999999999999999999999999999998876653    3478899999999998  6777899


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++.....              |         .                   ...|+|++|++++.+.++++|+++
T Consensus        79 ~Gd~V~~~~~~~--------------~---------~-------------------~~~g~~~~~~~v~~~~~~~lp~~~  116 (324)
T cd08288          79 PGDRVVLTGWGV--------------G---------E-------------------RHWGGYAQRARVKADWLVPLPEGL  116 (324)
T ss_pred             CCCEEEECCccC--------------C---------C-------------------CCCCcceeEEEEchHHeeeCCCCC
Confidence            999999862100              0         0                   012589999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHH--HhccCC-CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          167 PLEKICLLSCGLSAGLGAAW--NVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~--~~~~~~-~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      ++++++.++..+++++.++.  +..... ++++|||+|+ |++|++++|+|+++|+ +|+++..++++.+.++++|++.+
T Consensus       117 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~  195 (324)
T cd08288         117 SARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEI  195 (324)
T ss_pred             CHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEE
Confidence            99999999999999987753  123445 6789999998 9999999999999999 78888889999999999999888


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeec
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF  321 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~  321 (353)
                      +++.+    +...++.+..+++|.+||++++ ..+...+..++.+ |+++.+|.... .........+ .+++++.+...
T Consensus       196 ~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~  268 (324)
T cd08288         196 IDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDS  268 (324)
T ss_pred             EEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEe
Confidence            87752    2224555555578999999987 4577888889986 99999997532 2222333334 56889888754


Q ss_pred             CCCCC---CCcHHHHHHHHHcCCCCC
Q 018627          322 GGWKP---KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       322 ~~~~~---~~~~~~~~~~l~~g~i~~  344 (353)
                      .....   .+.+..+.+++..+++++
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (324)
T cd08288         269 VMAPIERRRAAWARLARDLDPALLEA  294 (324)
T ss_pred             ecccchhhHHHHHHHHHHHhcCCccc
Confidence            33221   123556677787887754

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.5e-29  Score=236.35  Aligned_cols=278  Identities=23%  Similarity=0.270  Sum_probs=226.5

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++..++.+  +++++.+.|.+.+++|+|++.++++|++|.....+..    ..|.++|||++|+|+.+|+++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            689999887765  8888888888999999999999999999998876653    2377899999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|+++...                         ..   +               ..|+|++|+.++.+.++++|+++
T Consensus        81 ~Gd~V~~~~~~-------------------------~~---~---------------~~g~~~~~~~v~~~~~~~~p~~~  117 (326)
T cd08272          81 VGDEVYGCAGG-------------------------LG---G---------------LQGSLAEYAVVDARLLALKPANL  117 (326)
T ss_pred             CCCEEEEccCC-------------------------cC---C---------------CCCceeEEEEecHHHcccCCCCC
Confidence            99999986310                         00   0               12589999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++.+++.++..+.+||+++.+..++.+|++++|+|+ |.+|++++++++.+|+ +|+++.++ ++.+.++++|++.+++.
T Consensus       118 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~  195 (326)
T cd08272         118 SMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYY  195 (326)
T ss_pred             CHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEec
Confidence            999999999999999999878889999999999986 9999999999999999 88888887 88888999999887776


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC-
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG-  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~-  323 (353)
                      .  .. +.+.+...+++ ++|+++|++++ ..+..++.+++++ |+++.+|...   ..++... ..+++++.+..... 
T Consensus       196 ~--~~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~  266 (326)
T cd08272         196 R--ET-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVFTLLP  266 (326)
T ss_pred             c--hh-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEEcccc
Confidence            5  34 67777777766 89999999997 5678899999996 9999998663   2222232 24677777665432 


Q ss_pred             -CC------CCCcHHHHHHHHHcCCCCC
Q 018627          324 -WK------PKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       324 -~~------~~~~~~~~~~~l~~g~i~~  344 (353)
                       ..      ..+.+..+++++.++++.+
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~  294 (326)
T cd08272         267 LLTGEGRAHHGEILREAARLVERGQLRP  294 (326)
T ss_pred             cccccchhhHHHHHHHHHHHHHCCCccc
Confidence             10      1245778888998998764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.7e-29  Score=236.31  Aligned_cols=280  Identities=25%  Similarity=0.272  Sum_probs=221.4

Q ss_pred             eeEEEEecCC--CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        13 ~~a~~~~~~~--~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      |||+++.+++  ..++++++|.|++.+++|+||+.++++|++|+....+..   .+|.++|||++|+|+.+|+++..+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            7899999888  359999999999999999999999999999988776654   33678999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      ||+|++.+...                                             ..|+|++|+.++.+.++++|++++
T Consensus        81 Gd~V~~~~~~~---------------------------------------------~~~~~~s~~~~~~~~~~~ip~~~~  115 (325)
T cd08271          81 GDRVAYHASLA---------------------------------------------RGGSFAEYTVVDARAVLPLPDSLS  115 (325)
T ss_pred             CCEEEeccCCC---------------------------------------------CCccceeEEEeCHHHeEECCCCCC
Confidence            99999863110                                             014899999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      +.+++.+.+.+.++++++.+...+.+|++++|+|+ |.+|+++++++++.|+ .|+.+. ++++.+.++++|++.+++..
T Consensus       116 ~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~  193 (325)
T cd08271         116 FEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYN  193 (325)
T ss_pred             HHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCC
Confidence            99999999999999999888888999999999998 7899999999999999 777775 67788888889998888765


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchh---hhhcCcEEEeeecC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG---LFLSGRTLKGSLFG  322 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~---~~~~~~~i~g~~~~  322 (353)
                        ...+.+.++...++ ++|++++++++. .....+++++++ |+++.++......  .....   ..++++.+......
T Consensus       194 --~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  267 (325)
T cd08271         194 --DEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPDAS--PDPPFTRALSVHEVALGAAHDH  267 (325)
T ss_pred             --CccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCCCc--chhHHhhcceEEEEEecccccc
Confidence              44566777777665 899999999974 456789999996 9999997543311  11111   01223333322211


Q ss_pred             CC-----CCCCcHHHHHHHHHcCCCCCC
Q 018627          323 GW-----KPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       323 ~~-----~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      ..     ...+.+.++++++.++++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~  295 (325)
T cd08271         268 GDPAAWQDLRYAGEELLELLAAGKLEPL  295 (325)
T ss_pred             cchhhHHHHHHHHHHHHHHHHCCCeeec
Confidence            11     111345678899999988654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.9e-29  Score=237.13  Aligned_cols=275  Identities=21%  Similarity=0.266  Sum_probs=215.6

Q ss_pred             eEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        14 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      ||+++...+.+  +++++.+.|.|.++||+||+.++++|++|+..+.+..    .+|.++|||++|+|+.+|+++..|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            68888877654  8899999999999999999999999999998877654    34678999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      ||+|++.+.                                                .|+|++|+.++.+.++++|++++
T Consensus        82 Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~  113 (331)
T cd08273          82 GDRVAALTR------------------------------------------------VGGNAEYINLDAKYLVPVPEGVD  113 (331)
T ss_pred             CCEEEEeCC------------------------------------------------CcceeeEEEechHHeEECCCCCC
Confidence            999998731                                                14899999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      +++++.+++++.+||+++.+..++.+|++++|+|+ |++|++++++|+.+|+ +|+++.+ +++.+.++++|+.. ++..
T Consensus       114 ~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~  190 (331)
T cd08273         114 AAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR  190 (331)
T ss_pred             HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC
Confidence            99999999999999999877788999999999997 9999999999999999 8888877 88888989999754 3433


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecc--hh-----------hhhc-
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH--YG-----------LFLS-  312 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~~-----------~~~~-  312 (353)
                        ..++.+.  ....+++|++++|+++.. +..++++++++ |+++.+|.........+.  +.           .... 
T Consensus       191 --~~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (331)
T cd08273         191 --TKDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTG  264 (331)
T ss_pred             --Ccchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceecc
Confidence              2333333  233358999999999854 88999999996 999999976543221111  10           0111 


Q ss_pred             -CcEEEeeecCCC-C---CCCcHHHHHHHHHcCCCCCC
Q 018627          313 -GRTLKGSLFGGW-K---PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       313 -~~~i~g~~~~~~-~---~~~~~~~~~~~l~~g~i~~~  345 (353)
                       +.++........ .   ..+.+.++++++++|.+.+.
T Consensus       265 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~  302 (331)
T cd08273         265 RRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK  302 (331)
T ss_pred             ceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC
Confidence             333322222110 0   12567789999999988753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=8.9e-29  Score=230.90  Aligned_cols=278  Identities=24%  Similarity=0.317  Sum_probs=226.7

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |+|+.+..++.+  +++.+.+.|.+++++|+||+.++++|++|+..+.+..    .+|.++|||++|+|+.+|+++.+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            678888776654  6777777777899999999999999999988876643    2457999999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++...                                                .|+|++|+.++...++++|+++
T Consensus        81 ~Gd~V~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~  112 (325)
T TIGR02824        81 VGDRVCALVA------------------------------------------------GGGYAEYVAVPAGQVLPVPEGL  112 (325)
T ss_pred             CCCEEEEccC------------------------------------------------CCcceeEEEecHHHcEeCCCCC
Confidence            9999988621                                                1489999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++.+++.+..++.++|+++.+...+.++++++|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.+++.
T Consensus       113 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  191 (325)
T TIGR02824       113 SLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINY  191 (325)
T ss_pred             CHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            999999999999999999878889999999999997 9999999999999999 88888889999998889998777766


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  323 (353)
                      .  ..++.+.++...++ ++|++++++|. ......+.+++++ |+++.+|....... .++...+ .+++++.+.....
T Consensus       192 ~--~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  266 (325)
T TIGR02824       192 R--EEDFVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRA  266 (325)
T ss_pred             C--chhHHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhh
Confidence            4  45566777776665 89999999987 4678899999996 99999987543222 3334333 5699998887554


Q ss_pred             CCC-------CCcHHHHHHHHHcCCCCC
Q 018627          324 WKP-------KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       324 ~~~-------~~~~~~~~~~l~~g~i~~  344 (353)
                      ...       ...+.+++++++++++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~  294 (325)
T TIGR02824       267 RPVAEKAAIAAELREHVWPLLASGRVRP  294 (325)
T ss_pred             cchhhhHHHHHHHHHHHHHHHHCCcccC
Confidence            211       112356778888888764

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.7e-28  Score=229.24  Aligned_cols=284  Identities=24%  Similarity=0.339  Sum_probs=225.4

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+.+.+.+.+  +++.+.+.|.+++++|+|||.++++|+.|.....+..    .+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            678888776543  7788888888999999999999999999988766543    3477899999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|++++...+                                           ...|+|++|+.++.+.++++|+++
T Consensus        81 ~Gd~V~~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~  117 (328)
T cd08268          81 VGDRVSVIPAADL-------------------------------------------GQYGTYAEYALVPAAAVVKLPDGL  117 (328)
T ss_pred             CCCEEEecccccc-------------------------------------------CCCccceEEEEechHhcEeCCCCC
Confidence            9999998742110                                           012589999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++++++.+.+++.++|.++.+...+.++++++|+|+ |.+|++++++++..|+ +++.+.+++++.+.++++|++.+++.
T Consensus       118 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  196 (328)
T cd08268         118 SFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVT  196 (328)
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEec
Confidence            999999999999999999877888999999999997 9999999999999999 88888889999999988998888776


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchh-hhhcCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~  323 (353)
                      .  ...+.+.+.....+ ++|++++++++ .....++++++++ |+++.+|.... ....+... .+.+++++.+.....
T Consensus       197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  271 (328)
T cd08268         197 D--EEDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLDE  271 (328)
T ss_pred             C--CccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEeccc
Confidence            5  45666677776665 89999999998 5678889999996 99999986543 21222322 245688887765443


Q ss_pred             CC-CCCc----HHHHHHHHHcCCCCCC
Q 018627          324 WK-PKTD----LPSLVNRYLKKVRNTR  345 (353)
Q Consensus       324 ~~-~~~~----~~~~~~~l~~g~i~~~  345 (353)
                      .. ..++    +..+..++.++++.+.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (328)
T cd08268         272 ITLDPEARRRAIAFILDGLASGALKPV  298 (328)
T ss_pred             ccCCHHHHHHHHHHHHHHHHCCCCcCC
Confidence            11 1123    3344455667776643

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=8e-29  Score=235.34  Aligned_cols=237  Identities=20%  Similarity=0.327  Sum_probs=192.4

Q ss_pred             eEEEEecCCCCeEEEEeecCCC---CCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCC-CC
Q 018627           14 KAAVAWGAGQPLVVEEVEVNPP---QPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT-EF   85 (353)
Q Consensus        14 ~a~~~~~~~~~l~~~~~~~p~~---~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~-~~   85 (353)
                      |++++.+++.++++++++.|.|   .+++|+||+.++++|++|+..+.+..    ..|.++|+|++|+|+++|+++. .|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            6899999988888888887776   89999999999999999988765432    1377899999999999999998 89


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC----ceEE
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG----CAVK  161 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~----~v~~  161 (353)
                      ++||+|++.....|+                                           ..|+|++|++++..    .+++
T Consensus        82 ~~Gd~V~~~~~~~~~-------------------------------------------~~g~~~~~~~v~~~~~~~~~~~  118 (352)
T cd08247          82 KVGDEVCGIYPHPYG-------------------------------------------GQGTLSQYLLVDPKKDKKSITR  118 (352)
T ss_pred             CCCCEEEEeecCCCC-------------------------------------------CCceeeEEEEEccccccceeEE
Confidence            999999987322110                                           12589999999987    7899


Q ss_pred             CCCCCChhhhhhhchhhhHHHHHHHHhc-cCCCCCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhCC
Q 018627          162 VSSIAPLEKICLLSCGLSAGLGAAWNVA-DISKGSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       162 iP~~l~~~~aa~l~~~~~ta~~al~~~~-~~~~g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      +|+++++++++.+++.+.|||+++.+.. ++++|++|||+|+ +.+|++++++|++++ .+.++++. ++++.+.++++|
T Consensus       119 lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g  197 (352)
T cd08247         119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLG  197 (352)
T ss_pred             CCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhC
Confidence            9999999999999999999999987766 7999999999998 789999999999984 43677775 455566778899


Q ss_pred             CceEeCCCCCCc--cHHHHHHHHh-cCCccEEEeccCChHHHHHHHHHhc---cCCceEEEEc
Q 018627          239 VTEFLNPNDNNE--PVQQVIKRIT-DGGADYSFECIGDTGMITTALQSCC---DGWGLAVTLG  295 (353)
Q Consensus       239 ~~~~~~~~~~~~--~~~~~~~~~~-~~~~dvv~d~~g~~~~~~~~~~~l~---~~~G~~v~~g  295 (353)
                      ++.+++..+...  .+.+.++... ++++|++|||+|+......++++++   ++ |+++.++
T Consensus       198 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~  259 (352)
T cd08247         198 ADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIV  259 (352)
T ss_pred             CCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEe
Confidence            988887652110  2334444444 3499999999998667888899999   96 9999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=1.4e-28  Score=227.42  Aligned_cols=262  Identities=24%  Similarity=0.335  Sum_probs=211.4

Q ss_pred             cCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCccccc
Q 018627           32 VNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKS  107 (353)
Q Consensus        32 ~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~  107 (353)
                      .|++.+++|+||+.++++|+.|+....+.+    .+|.++|+|++|+|+++|+++.++++||+|+++...          
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----------   71 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE----------   71 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence            577899999999999999999998877653    357799999999999999999999999999987311          


Q ss_pred             CCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHH
Q 018627          108 DKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN  187 (353)
Q Consensus       108 g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~  187 (353)
                                                          ..|+|++|+.++++.++++|+++++++++.++..+.+||+++ +
T Consensus        72 ------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~  114 (303)
T cd08251          72 ------------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-A  114 (303)
T ss_pred             ------------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-H
Confidence                                                124899999999999999999999999999999999999997 5


Q ss_pred             hccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-Ccc
Q 018627          188 VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GAD  265 (353)
Q Consensus       188 ~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~d  265 (353)
                      ...+++|++++|+++ |.+|++++++++++|+ +|+++.+++++.+.++++|++.+++..  ..++.+.+...+++ ++|
T Consensus       115 ~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~~~d  191 (303)
T cd08251         115 RAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIMRLTGGRGVD  191 (303)
T ss_pred             hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHcCCCCce
Confidence            788999999999976 9999999999999999 899998999999999999998888775  45677778777776 899


Q ss_pred             EEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC------CCCcHHHHHHHHHc
Q 018627          266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK------PKTDLPSLVNRYLK  339 (353)
Q Consensus       266 vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~------~~~~~~~~~~~l~~  339 (353)
                      +++|++++ ......+++++++ |+++.+|.........+....+.++..+.........      ..+.+.++++++.+
T Consensus       192 ~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (303)
T cd08251         192 VVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEE  269 (303)
T ss_pred             EEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHC
Confidence            99999975 6778889999996 9999998754322222333333345444333221111      11346678889999


Q ss_pred             CCCCCC
Q 018627          340 KVRNTR  345 (353)
Q Consensus       340 g~i~~~  345 (353)
                      |++++.
T Consensus       270 g~~~~~  275 (303)
T cd08251         270 GELRPT  275 (303)
T ss_pred             CCccCC
Confidence            987653

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=5.6e-28  Score=225.11  Aligned_cols=277  Identities=28%  Similarity=0.430  Sum_probs=225.8

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCC-CCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~-~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      |+|+++..++.+  +++.+.+ |.+. +++|+|++.++++|++|+..+.+..    .+|.++|||++|+|+.+|+++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            678888754432  7777777 7766 4999999999999999998876654    236689999999999999999899


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||+|++++.                              +                  |+|++|+.++.+.++++|++
T Consensus        80 ~~G~~V~~~~~------------------------------~------------------~~~~~~~~~~~~~~~~ip~~  111 (323)
T cd08241          80 KVGDRVVALTG------------------------------Q------------------GGFAEEVVVPAAAVFPLPDG  111 (323)
T ss_pred             CCCCEEEEecC------------------------------C------------------ceeEEEEEcCHHHceeCCCC
Confidence            99999998720                              1                  48999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      +++.+++.+...+.+|+.++.+...+.++++|+|+|+ |.+|++++++++..|+ .|+.+++++++.+.++++|++.+++
T Consensus       112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (323)
T cd08241         112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID  190 (323)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeee
Confidence            9999998888899999999877788999999999998 9999999999999999 7999989999999999999887776


Q ss_pred             CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecch-hhhhcCcEEEeeecC
Q 018627          245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFG  322 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~  322 (353)
                      ..  ..++.+.++..+++ ++|.+++++|. .....++++++++ |+++.+|....... .+.. ..+.+++++.+....
T Consensus       191 ~~--~~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  265 (323)
T cd08241         191 YR--DPDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYWG  265 (323)
T ss_pred             cC--CccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEecc
Confidence            65  45677778877766 89999999997 6778899999996 99999987543221 1122 224568888887655


Q ss_pred             CCCC------CCcHHHHHHHHHcCCCCC
Q 018627          323 GWKP------KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       323 ~~~~------~~~~~~~~~~l~~g~i~~  344 (353)
                      .+..      .+.+.++++++.++++.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (323)
T cd08241         266 AYARREPELLRANLAELFDLLAEGKIRP  293 (323)
T ss_pred             cccchhHHHHHHHHHHHHHHHHCCCccc
Confidence            4321      145678889999998754

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.97  E-value=2e-28  Score=226.86  Aligned_cols=271  Identities=24%  Similarity=0.334  Sum_probs=217.1

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      |+|+++..++..  +++++.+.|.++++||+||+.++++|++|+..+.+..      .+|.++|||++|+|+.+|+++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            678998877653  5677888888999999999999999999998876642      34789999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      +++||+|++++...                                             ..|+|++|+.++...++++|+
T Consensus        81 ~~~G~~V~~~~~~~---------------------------------------------~~g~~~~~~~~~~~~~~~~p~  115 (309)
T cd05289          81 FKVGDEVFGMTPFT---------------------------------------------RGGAYAEYVVVPADELALKPA  115 (309)
T ss_pred             CCCCCEEEEccCCC---------------------------------------------CCCcceeEEEecHHHhccCCC
Confidence            99999999873110                                             014899999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      ++++.+++.+++.+.++++++.+...+.+|++|||+|+ |.+|++++++++..|+ +|+++.+++ +.+.++++|++.++
T Consensus       116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~  193 (309)
T cd05289         116 NLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVI  193 (309)
T ss_pred             CCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEE
Confidence            99999999999999999999877777999999999997 9999999999999999 788887777 88888889987777


Q ss_pred             CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC
Q 018627          244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG  323 (353)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  323 (353)
                      +..  ..++.+   ....+++|++|+++++. ....++++++++ |+++.+|.......     ..+.+++.+.......
T Consensus       194 ~~~--~~~~~~---~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~~  261 (309)
T cd05289         194 DYT--KGDFER---AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVEP  261 (309)
T ss_pred             eCC--CCchhh---ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEecc
Confidence            665  223332   22223899999999974 788999999996 99999987544211     2233466665554322


Q ss_pred             CCCCCcHHHHHHHHHcCCCCC
Q 018627          324 WKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      .  .+.+.+++++++++++++
T Consensus       262 ~--~~~~~~~~~~~~~~~~~~  280 (309)
T cd05289         262 D--GEQLAELAELVEAGKLRP  280 (309)
T ss_pred             c--HHHHHHHHHHHHCCCEEE
Confidence            1  457888999999888754

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=3.1e-27  Score=222.08  Aligned_cols=278  Identities=22%  Similarity=0.320  Sum_probs=218.6

Q ss_pred             eEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           14 KAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        14 ~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      ||+++...+.  .+.+.+.+.|++.+++|+||+.++++|++|...+.+..    ..|.++|||++|+|+.+|+++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            4566665554  37788888888999999999999999999998877654    23678999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      ||+|+++..                                                .|+|++|+.++.+.++++|++++
T Consensus        81 G~~V~~~~~------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~~  112 (337)
T cd08275          81 GDRVMGLTR------------------------------------------------FGGYAEVVNVPADQVFPLPDGMS  112 (337)
T ss_pred             CCEEEEecC------------------------------------------------CCeeeeEEEecHHHeEECCCCCC
Confidence            999998721                                                14899999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +.+++.+.+++.++|+++.+...+++|++|+|+|+ |.+|++++++|+++ +. .++.. .++++.+.++++|++.+++.
T Consensus       113 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~  190 (337)
T cd08275         113 FEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDY  190 (337)
T ss_pred             HHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeC
Confidence            99999999999999999888888999999999998 99999999999998 43 33333 34557788888999888776


Q ss_pred             CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC--ce-------------ecc-hhh
Q 018627          246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EV-------------AAH-YGL  309 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~-------------~~~-~~~  309 (353)
                      .  ..++.+.++..+++++|+++||+|+ .....++++++++ |+++.+|......  .+             ... ...
T Consensus       191 ~--~~~~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (337)
T cd08275         191 R--TQDYVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKL  266 (337)
T ss_pred             C--CCcHHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHH
Confidence            5  4567777777765689999999997 4678889999997 9999998654311  11             111 122


Q ss_pred             hhcCcEEEeeecCCCCCC-----CcHHHHHHHHHcCCCCCC
Q 018627          310 FLSGRTLKGSLFGGWKPK-----TDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       310 ~~~~~~i~g~~~~~~~~~-----~~~~~~~~~l~~g~i~~~  345 (353)
                      +.+++++.++........     ..+.++++++.++++.+.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (337)
T cd08275         267 ISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK  307 (337)
T ss_pred             hhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc
Confidence            345888888765422111     236678888989987654

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=1e-27  Score=223.72  Aligned_cols=264  Identities=26%  Similarity=0.295  Sum_probs=204.3

Q ss_pred             EEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCC
Q 018627           26 VVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC   99 (353)
Q Consensus        26 ~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c   99 (353)
                      ++++.|.|.++++||+||+.++++|++|...+.+..      .+|.++|||++|+|+++|+++.++++||+|++..... 
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~-   93 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK-   93 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence            788999999999999999999999999998877653      2577899999999999999999999999998873210 


Q ss_pred             CCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhh
Q 018627          100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS  179 (353)
Q Consensus       100 ~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~  179 (353)
                                                                  ..|+|++|+.++.+.++++|+++++++++.+++++.
T Consensus        94 --------------------------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~  129 (319)
T cd08267          94 --------------------------------------------GGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL  129 (319)
T ss_pred             --------------------------------------------CCceeeEEEEechhheEECCCCCCHHHHHhhhhHHH
Confidence                                                        024899999999999999999999999999999999


Q ss_pred             HHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHH
Q 018627          180 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       180 ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~  258 (353)
                      +||+++.+...+++|++|+|+|+ |++|++++++|+.+|+ +|+++.++ ++.+.++++|++.+++...  .++.   ..
T Consensus       130 ~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~  202 (319)
T cd08267         130 TALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---AL  202 (319)
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hh
Confidence            99999877777999999999997 9999999999999999 88888765 7888889999988877652  2332   33


Q ss_pred             HhcC-CccEEEeccCCh-HHHHHHHHHhccCCceEEEEcCCCCCCceec---chhhhhcCcEEEeeecCCCCCCCcHHHH
Q 018627          259 ITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAA---HYGLFLSGRTLKGSLFGGWKPKTDLPSL  333 (353)
Q Consensus       259 ~~~~-~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~~  333 (353)
                      ...+ ++|++++|+++. ......+..++++ |+++.+|..........   ..........+.......  ..+.+.++
T Consensus       203 ~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  279 (319)
T cd08267         203 TAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLEQL  279 (319)
T ss_pred             ccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHHHH
Confidence            3344 899999999842 2333344448996 99999997654222221   111112223332222221  15678899


Q ss_pred             HHHHHcCCCCC
Q 018627          334 VNRYLKKVRNT  344 (353)
Q Consensus       334 ~~~l~~g~i~~  344 (353)
                      ++++.++++++
T Consensus       280 ~~~l~~~~~~~  290 (319)
T cd08267         280 AELVEEGKLKP  290 (319)
T ss_pred             HHHHHCCCeee
Confidence            99999998764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.96  E-value=1.5e-27  Score=218.62  Aligned_cols=253  Identities=21%  Similarity=0.270  Sum_probs=207.2

Q ss_pred             CeEEEEEeeeecchhhhhhhccCC-CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccc
Q 018627           38 EEIRIKVVCTSLCRSDITAWETQA-IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL  116 (353)
Q Consensus        38 ~eVlVrv~~~~i~~~D~~~~~g~~-~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~  116 (353)
                      +||+||+.++++|++|++...+.. .+|.++|||++|+|+.+|+++..+++||+|+++.                     
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~---------------------   59 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA---------------------   59 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCCCCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe---------------------
Confidence            589999999999999999887754 4688999999999999999999999999999862                     


Q ss_pred             cccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCE
Q 018627          117 GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGST  196 (353)
Q Consensus       117 ~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~  196 (353)
                                                  .|+|+||+.++.+.++++|+++++.+++.+.+++.+++.++.+...+++|++
T Consensus        60 ----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~  111 (293)
T cd05195          60 ----------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGES  111 (293)
T ss_pred             ----------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCE
Confidence                                        1489999999999999999999999999998999999999878888999999


Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC--CceEeCCCCCCccHHHHHHHHhcC-CccEEEeccC
Q 018627          197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG  272 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G--~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g  272 (353)
                      |+|+|+ |.+|++++++++.+|+ +++++.+++++.+.++++|  ++.+++..  ..++.+.++..+.+ ++|++++++|
T Consensus       112 vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~  188 (293)
T cd05195         112 VLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRATGGRGVDVVLNSLS  188 (293)
T ss_pred             EEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHhCCCCceEEEeCCC
Confidence            999986 9999999999999999 8999988889999998888  67777665  45677778877766 8999999999


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC--C----CCcHHHHHHHHHcCCCCC
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK--P----KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~--~----~~~~~~~~~~l~~g~i~~  344 (353)
                      +. .+..++++++++ |+++.+|.........+....+.+++.+.......+.  .    .+.+.+++++++++++++
T Consensus       189 ~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (293)
T cd05195         189 GE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKP  264 (293)
T ss_pred             ch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCccc
Confidence            85 788999999996 9999998765422122233333346666554433221  0    134678889999998764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>smart00829 PKS_ER Enoylreductase

Probab=99.96  E-value=3.7e-27  Score=215.87  Aligned_cols=250  Identities=20%  Similarity=0.306  Sum_probs=204.8

Q ss_pred             EEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCccccccccc
Q 018627           42 IKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR  121 (353)
Q Consensus        42 Vrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~  121 (353)
                      ||+.++++|++|++.+.+.+..|.++|||++|+|+.+|+++..+++||+|++..                          
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~--------------------------   55 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA--------------------------   55 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCCCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc--------------------------
Confidence            899999999999998888766678999999999999999999999999999862                          


Q ss_pred             ccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEc
Q 018627          122 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG  201 (353)
Q Consensus       122 g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~G  201 (353)
                                             .|+|++|+.++.+.++++|+++++.+++.+.+.+.+++.++.+...+.+|++|+|+|
T Consensus        56 -----------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g  112 (288)
T smart00829       56 -----------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHA  112 (288)
T ss_pred             -----------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEec
Confidence                                   148999999999999999999999999999999999999987878899999999998


Q ss_pred             C-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC--ceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHH
Q 018627          202 L-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMI  277 (353)
Q Consensus       202 a-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~--~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~  277 (353)
                      + |.+|+++++++++.|+ +|+++.+++++.+.++++|+  +.++++.  ..++.+.+....++ ++|+++|++++ ...
T Consensus       113 ~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~  188 (288)
T smart00829      113 AAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRATGGRGVDVVLNSLAG-EFL  188 (288)
T ss_pred             CCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHhCCCCcEEEEeCCCH-HHH
Confidence            6 9999999999999999 89999899999999999998  6677665  45677777777666 89999999986 678


Q ss_pred             HHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC-----CCCcHHHHHHHHHcCCCCCC
Q 018627          278 TTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK-----PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       278 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~l~~g~i~~~  345 (353)
                      ..+++.++++ |+++.+|.........+....+.+++++.+.....+.     ..+.+.+++++++++++++.
T Consensus       189 ~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (288)
T smart00829      189 DASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL  260 (288)
T ss_pred             HHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc
Confidence            8899999996 9999999754221222233333456666555432211     11346678888988988653

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=2.6e-24  Score=190.31  Aligned_cols=278  Identities=22%  Similarity=0.239  Sum_probs=208.9

Q ss_pred             eeeEEEEec--CCCC----eEE--EEee-cCCCCCCeEEEEEeeeecchhhhhhhccC----CCCCcccc----cceeEE
Q 018627           12 TCKAAVAWG--AGQP----LVV--EEVE-VNPPQPEEIRIKVVCTSLCRSDITAWETQ----AIFPRIFG----HEASGI   74 (353)
Q Consensus        12 ~~~a~~~~~--~~~~----l~~--~~~~-~p~~~~~eVlVrv~~~~i~~~D~~~~~g~----~~~p~~~G----~e~~G~   74 (353)
                      +.++|++..  ++-|    +.+  .+.+ ..++++++||||..+.+.+|.-.......    +-.|+.+|    ...+|+
T Consensus         3 ~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~k   82 (343)
T KOG1196|consen    3 TNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAK   82 (343)
T ss_pred             cccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEE
Confidence            356677654  2222    443  3444 34578899999999999998643322111    13344444    367889


Q ss_pred             EEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEE
Q 018627           75 VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV  154 (353)
Q Consensus        75 V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~  154 (353)
                      |++.  +..++++||.|.+..                                                   +|.||.++
T Consensus        83 Vi~S--~~~~~~~GD~v~g~~---------------------------------------------------gWeeysii  109 (343)
T KOG1196|consen   83 VIDS--GHPNYKKGDLVWGIV---------------------------------------------------GWEEYSVI  109 (343)
T ss_pred             EEec--CCCCCCcCceEEEec---------------------------------------------------cceEEEEe
Confidence            9885  457899999998872                                                   79999999


Q ss_pred             eCC--ceEECC--CCCChhhh-hhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          155 HSG--CAVKVS--SIAPLEKI-CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       155 ~~~--~v~~iP--~~l~~~~a-a~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +++  ..+++|  .+.++... ..+..+..|||..+.+...++.|++|+|-|| |.+|+.+.|+|+.+|+ .|+++..++
T Consensus       110 ~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~  188 (343)
T KOG1196|consen  110 TPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSK  188 (343)
T ss_pred             cCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCCh
Confidence            765  344544  34555543 5566788999999999999999999999987 9999999999999999 999999999


Q ss_pred             hhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC---Ccee
Q 018627          229 EKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEVA  304 (353)
Q Consensus       229 ~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---~~~~  304 (353)
                      +|.++++. +|.+..+||++ +.+..+++++..++++|+.||++|+ ..++..+..|+.. ||++.+|.-...   .+..
T Consensus       189 EKv~ll~~~~G~d~afNYK~-e~~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~  265 (343)
T KOG1196|consen  189 EKVDLLKTKFGFDDAFNYKE-ESDLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEG  265 (343)
T ss_pred             hhhhhhHhccCCccceeccC-ccCHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCcc
Confidence            99998855 79999999984 5589999999888899999999998 6789999999996 999999975431   1112


Q ss_pred             cc--hhhhhcCcEEEeeecCCCCCC--CcHHHHHHHHHcCCCCCCC
Q 018627          305 AH--YGLFLSGRTLKGSLFGGWKPK--TDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       305 ~~--~~~~~~~~~i~g~~~~~~~~~--~~~~~~~~~l~~g~i~~~~  346 (353)
                      +.  ...+.+++++.|+....+.++  +-++.+..++++|||+..+
T Consensus       266 ~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e  311 (343)
T KOG1196|consen  266 LHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE  311 (343)
T ss_pred             ccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence            21  233467888888776665433  3457888999999998543

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.94  E-value=1.7e-24  Score=198.65  Aligned_cols=219  Identities=28%  Similarity=0.341  Sum_probs=176.7

Q ss_pred             CCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCcccc
Q 018627           62 IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYH  141 (353)
Q Consensus        62 ~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~  141 (353)
                      ++|.++|||++|+|+++|+++.++++||+|+++                                               
T Consensus        19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-----------------------------------------------   51 (277)
T cd08255          19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-----------------------------------------------   51 (277)
T ss_pred             cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence            788999999999999999999999999999986                                               


Q ss_pred             ccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeE
Q 018627          142 YCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI  221 (353)
Q Consensus       142 ~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~v  221 (353)
                          +.|++|++++.+.++++|+++++++++.+ +.+.+||+++ ...++++|+++||+|+|.+|++++++|+++|+++|
T Consensus        52 ----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~v  125 (277)
T cd08255          52 ----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREV  125 (277)
T ss_pred             ----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcE
Confidence                26999999999999999999999999888 7899999997 46889999999999889999999999999999449


Q ss_pred             EEEcCChhhHHHHHhCC-CceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          222 IGVDTNPEKCEKAKAFG-VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       222 i~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +++++++++.+.++++| ++.++...  +        ....+ ++|++||+++........+++++++ |+++.+|....
T Consensus       126 i~~~~~~~~~~~~~~~g~~~~~~~~~--~--------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~  194 (277)
T cd08255         126 VGVDPDAARRELAEALGPADPVAADT--A--------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGL  194 (277)
T ss_pred             EEECCCHHHHHHHHHcCCCccccccc--h--------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCC
Confidence            99999999999999999 45444332  1        11233 8999999998777889999999997 99999997655


Q ss_pred             CCceecchhhhhcCcEEEeeecCCCC---------CCCcHHHHHHHHHcCCCCCC
Q 018627          300 KPEVAAHYGLFLSGRTLKGSLFGGWK---------PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       300 ~~~~~~~~~~~~~~~~i~g~~~~~~~---------~~~~~~~~~~~l~~g~i~~~  345 (353)
                      . ..........+.+++.+.......         ..+.+.++++++.++++++.
T Consensus       195 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~  248 (277)
T cd08255         195 K-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL  248 (277)
T ss_pred             C-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc
Confidence            3 222221112345577666544321         12578999999999987643

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.90  E-value=3.6e-23  Score=207.59  Aligned_cols=253  Identities=19%  Similarity=0.191  Sum_probs=212.2

Q ss_pred             eEEEEeecC---CCCCCeEEEEEeeeecchhhhhhhccCC----------CCCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627           25 LVVEEVEVN---PPQPEEIRIKVVCTSLCRSDITAWETQA----------IFPRIFGHEASGIVESVGPGVTEFNEGEHV   91 (353)
Q Consensus        25 l~~~~~~~p---~~~~~eVlVrv~~~~i~~~D~~~~~g~~----------~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V   91 (353)
                      +.|.+-|..   +..++.=+.-|.|+.||..|+.+..|+.          ...+++|-|++|+          .+-|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence            777777754   3467888999999999999999999987          2336888888886          4669999


Q ss_pred             EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhh
Q 018627           92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI  171 (353)
Q Consensus        92 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~a  171 (353)
                      +++...                                                -++++.+.++.+++|.+|++..++||
T Consensus      1499 M~mvpA------------------------------------------------ksLATt~l~~rd~lWevP~~WTleeA 1530 (2376)
T KOG1202|consen 1499 MGMVPA------------------------------------------------KSLATTVLASRDFLWEVPSKWTLEEA 1530 (2376)
T ss_pred             EEeeeh------------------------------------------------hhhhhhhhcchhhhhhCCcccchhhc
Confidence            997421                                                17999999999999999999999999


Q ss_pred             hhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C---CCceEeCCC
Q 018627          172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F---GVTEFLNPN  246 (353)
Q Consensus       172 a~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~---G~~~~~~~~  246 (353)
                      +..|+.|+|+|+||+.+..+++|++||||++ |++|++++.+|.++|+ +|+.+..+++|++.+.+ |   -..++-|.+
T Consensus      1531 stVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSR 1609 (2376)
T KOG1202|consen 1531 STVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSR 1609 (2376)
T ss_pred             ccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccccc
Confidence            9999999999999999999999999999955 9999999999999999 99999999999998865 3   333444544


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                        +.+|...+++.+.| |+|+|+++... +-++.+++|++.+ |||..+|-..-...-++-+..|++|.+++|...-+..
T Consensus      1610 --dtsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvm 1685 (2376)
T KOG1202|consen 1610 --DTSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVM 1685 (2376)
T ss_pred             --cccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhh
Confidence              77899999999998 99999999986 6789999999997 9999999877666667778878899999998766544


Q ss_pred             C--CCcHHHHHHHHHcC
Q 018627          326 P--KTDLPSLVNRYLKK  340 (353)
Q Consensus       326 ~--~~~~~~~~~~l~~g  340 (353)
                      .  .+++.++..++++|
T Consensus      1686 ege~e~~~ev~~Lv~eG 1702 (2376)
T KOG1202|consen 1686 EGEEEMWREVAALVAEG 1702 (2376)
T ss_pred             cCcHHHHHHHHHHHHhh
Confidence            2  24555677777666

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.89  E-value=5.4e-23  Score=162.35  Aligned_cols=105  Identities=37%  Similarity=0.641  Sum_probs=91.9

Q ss_pred             CCeEEEEEeeeecchhhhhhhccC----CCCCcccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCC
Q 018627           37 PEEIRIKVVCTSLCRSDITAWETQ----AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT  112 (353)
Q Consensus        37 ~~eVlVrv~~~~i~~~D~~~~~g~----~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~  112 (353)
                      |+||||||++++||++|++.+.+.    ..+|.++|||++|+|+++|+++++|++||||++.+...|+.|.+|+.+.++.
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            789999999999999999999883    2889999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEEC
Q 018627          113 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  162 (353)
Q Consensus       113 c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i  162 (353)
                      |.+......+.                     .|+||||+.+|++.++|+
T Consensus        81 c~~~~~~g~~~---------------------~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVLGLGL---------------------DGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEETTTSS---------------------TCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEeEcCC---------------------CCcccCeEEEehHHEEEC
Confidence            97776544332                     269999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.74  E-value=3.4e-17  Score=133.08  Aligned_cols=128  Identities=27%  Similarity=0.414  Sum_probs=112.8

Q ss_pred             hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHH
Q 018627          204 TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ  282 (353)
Q Consensus       204 ~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~  282 (353)
                      ++|++++|+|+++|+ +|++++++++|++.++++|++.+++++  +.++.+.+++.+++ ++|+||||+|....++.+++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~--~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~   77 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYS--DDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK   77 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETT--TSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhccccccccc--ccccccccccccccccceEEEEecCcHHHHHHHHH
Confidence            589999999999996 999999999999999999999999987  56799999999988 99999999998899999999


Q ss_pred             HhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCCCCcHHHHHHHHHc
Q 018627          283 SCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYLK  339 (353)
Q Consensus       283 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~l~~  339 (353)
                      +++++ |+++.+|.... ...+++...+ ++++++.|++.+.   .++++++++++.+
T Consensus        78 ~l~~~-G~~v~vg~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~  130 (130)
T PF00107_consen   78 LLRPG-GRIVVVGVYGG-DPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ  130 (130)
T ss_dssp             HEEEE-EEEEEESSTST-SEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred             HhccC-CEEEEEEccCC-CCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence            99997 99999999873 4555555555 5699999998776   5789999998864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.36  E-value=1.5e-11  Score=120.57  Aligned_cols=153  Identities=20%  Similarity=0.235  Sum_probs=114.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCC-----------ccHHHHHHH
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNN-----------EPVQQVIKR  258 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~-----------~~~~~~~~~  258 (353)
                      ..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+           .++.+..++
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4679999999999999999999999999 89999999999999999999864 5443211           133333333


Q ss_pred             H-hc--CCccEEEeccCCh-----HH-HHHHHHHhccCCceEEEEcCCC-CCCceecchhhh-h-cCcEEEeeecCCCCC
Q 018627          259 I-TD--GGADYSFECIGDT-----GM-ITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGLF-L-SGRTLKGSLFGGWKP  326 (353)
Q Consensus       259 ~-~~--~~~dvv~d~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~-~-~~~~i~g~~~~~~~~  326 (353)
                      . .+  +++|++|+|++.+     .. .+.+++.++++ |+++++|... +....+.....+ . +++++.|.+..    
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~----  315 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDL----  315 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCCC----
Confidence            3 22  3799999999963     35 49999999997 9999999853 322233322223 3 68888887632    


Q ss_pred             CCcHH-HHHHHHHcCCCCCCCCcc
Q 018627          327 KTDLP-SLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       327 ~~~~~-~~~~~l~~g~i~~~~li~  349 (353)
                      ..+++ ++.+++.++.+++.++++
T Consensus       316 P~~~p~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        316 PSRLPTQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             chhHHHHHHHHHHhCCccHHHHhc
Confidence            23566 699999999999888887

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.27  E-value=1.4e-10  Score=111.11  Aligned_cols=149  Identities=18%  Similarity=0.201  Sum_probs=114.1

Q ss_pred             HHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhc
Q 018627          183 GAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       183 ~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      .++.+..+ ..+|++|+|.|+|.+|+.+++.++.+|+ +|++++.++.|++.++++|+..+ +       ..+.+     
T Consensus       190 ~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v-----  255 (413)
T cd00401         190 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV-----  255 (413)
T ss_pred             HHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH-----
Confidence            34444444 3689999999999999999999999999 89999999999999999998432 1       11222     


Q ss_pred             CCccEEEeccCChHHHHHH-HHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCCCcHH--HHHHHHH
Q 018627          262 GGADYSFECIGDTGMITTA-LQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP--SLVNRYL  338 (353)
Q Consensus       262 ~~~dvv~d~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~--~~~~~l~  338 (353)
                      .++|+||+|+|....+... +..++++ |+++.+|..  +..++.... ..+++++.++.....  ..+|+  +.+.++.
T Consensus       256 ~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~~~L-~~~el~i~g~~~~~~--~~~~~~g~aI~LLa  329 (413)
T cd00401         256 KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDVKGL-KENAVEVVNIKPQVD--RYELPDGRRIILLA  329 (413)
T ss_pred             cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCHHHH-HhhccEEEEccCCcc--eEEcCCcchhhhhh
Confidence            2589999999988878776 8999997 999999964  233443332 235888887764431  22566  7999999


Q ss_pred             cCCC-CCCCCccCC
Q 018627          339 KKVR-NTRKPSCGN  351 (353)
Q Consensus       339 ~g~i-~~~~li~~~  351 (353)
                      +|++ ++..+++|+
T Consensus       330 ~Grlvnl~~~~gH~  343 (413)
T cd00401         330 EGRLVNLGCATGHP  343 (413)
T ss_pred             CcCCCCCcccCCCc
Confidence            9999 999998887

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.44  E-value=4e-06  Score=80.86  Aligned_cols=104  Identities=23%  Similarity=0.334  Sum_probs=79.8

Q ss_pred             HHHHHHHhccCC-CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHH
Q 018627          181 GLGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       181 a~~al~~~~~~~-~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~  259 (353)
                      .|.++.+..++. .|++|+|.|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +.+       +.+.+   
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal---  265 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA---  265 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence            344554443544 89999999999999999999999999 899999998887777666754 221       22222   


Q ss_pred             hcCCccEEEeccCChHHHH-HHHHHhccCCceEEEEcCCCC
Q 018627          260 TDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       260 ~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~  299 (353)
                        .++|++|+++|....+. ..+..++++ +.++.+|....
T Consensus       266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d~  303 (425)
T PRK05476        266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFDN  303 (425)
T ss_pred             --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCCC
Confidence              26999999999877675 677889997 99999997654

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.42  E-value=2.3e-06  Score=84.13  Aligned_cols=106  Identities=20%  Similarity=0.282  Sum_probs=81.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCC-----------CccHHHHHHHH
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDN-----------NEPVQQVIKRI  259 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~-----------~~~~~~~~~~~  259 (353)
                      .++++|+|+|+|.+|++++++++.+|+ .|++.+.+.++++.++++|++.+. +..+.           ..++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            457999999999999999999999999 799999999999999999987632 22110           02333333333


Q ss_pred             hc---CCccEEEecc---CChH---HHHHHHHHhccCCceEEEEcCCCC
Q 018627          260 TD---GGADYSFECI---GDTG---MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       260 ~~---~~~dvv~d~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      ..   .++|++|+|+   |.+.   ..++.++.++++ +.+|+++...+
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G  288 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG  288 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence            33   2799999999   5433   467778999997 99999987655

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.30  E-value=1.7e-05  Score=73.62  Aligned_cols=98  Identities=20%  Similarity=0.343  Sum_probs=76.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+++|+|+|.|.+|+.+++.++.+|+ +|++++++.++.+.++++|+..+ .+    .++.+.+     ..+|+||+|++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~~l~~~l-----~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----SELAEEV-----GKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----HHHHHHh-----CCCCEEEECCC
Confidence            58999999999999999999999999 99999999988888888886532 11    1222222     25999999987


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCc
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPE  302 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~  302 (353)
                      ........++.++++ +.+++++..++..+
T Consensus       220 ~~~i~~~~l~~~~~g-~vIIDla~~pggtd  248 (296)
T PRK08306        220 ALVLTKEVLSKMPPE-ALIIDLASKPGGTD  248 (296)
T ss_pred             hhhhhHHHHHcCCCC-cEEEEEccCCCCcC
Confidence            644456677889997 99999998766443

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.26  E-value=8.1e-08  Score=93.29  Aligned_cols=160  Identities=16%  Similarity=0.173  Sum_probs=103.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCc
Q 018627           66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV  145 (353)
Q Consensus        66 ~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~  145 (353)
                      .-|.|+++.+.+|+++..+     +|++.+-. |+.|-+|    ++.|......+...+                     
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~~l~---------------------  137 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGKVLE---------------------  137 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchHHHH---------------------
Confidence            4588999999999988765     56666666 6666666    555665554332222                     


Q ss_pred             cceeeeEEEeCCceEE---C-CCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeE
Q 018627          146 SSFSEYTVVHSGCAVK---V-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI  221 (353)
Q Consensus       146 g~~a~~~~~~~~~v~~---i-P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~v  221 (353)
                      +.|++++.++. .+..   + +..++...+|.         ....+.....++++|+|+|+|.+|..+++.+...|+.+|
T Consensus       138 ~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av---------~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V  207 (417)
T TIGR01035       138 RLFQKAFSVGK-RVRTETDISAGAVSISSAAV---------ELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKI  207 (417)
T ss_pred             HHHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH---------HHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEE
Confidence            48888888765 3332   2 22222222211         111233344678999999999999999999999997689


Q ss_pred             EEEcCChhhHH-HHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHH
Q 018627          222 IGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM  276 (353)
Q Consensus       222 i~~~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~  276 (353)
                      ++++++.++.+ .++++|.. .+..    .++.+.+.     ++|+||.|++.+..
T Consensus       208 ~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l~-----~aDvVi~aT~s~~~  253 (417)
T TIGR01035       208 LIANRTYERAEDLAKELGGE-AVKF----EDLEEYLA-----EADIVISSTGAPHP  253 (417)
T ss_pred             EEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHHh-----hCCEEEECCCCCCc
Confidence            99999988755 55667754 2221    12222222     59999999987543

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.23  E-value=1.9e-05  Score=75.84  Aligned_cols=100  Identities=22%  Similarity=0.372  Sum_probs=77.5

Q ss_pred             HHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          184 AAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       184 al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ++.+..+ ...|++|+|.|.|.+|+.+++.++.+|+ +|++++.++.+...++..|+. +.+       ..+.+     .
T Consensus       184 ~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal-----~  249 (406)
T TIGR00936       184 GILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA-----K  249 (406)
T ss_pred             HHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----h
Confidence            3334334 3689999999999999999999999999 899999888887777777763 221       12222     2


Q ss_pred             CccEEEeccCChHHHHH-HHHHhccCCceEEEEcCCC
Q 018627          263 GADYSFECIGDTGMITT-ALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       263 ~~dvv~d~~g~~~~~~~-~~~~l~~~~G~~v~~g~~~  298 (353)
                      +.|++|+++|....+.. .+..++++ +.++.+|...
T Consensus       250 ~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~  285 (406)
T TIGR00936       250 IGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD  285 (406)
T ss_pred             cCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence            57999999998777764 78899997 9999998764

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.17  E-value=6.5e-06  Score=76.97  Aligned_cols=109  Identities=22%  Similarity=0.230  Sum_probs=81.0

Q ss_pred             CceEECCCCCChhhhhhhchhhhHHHHHHHHhcc---CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhH-H
Q 018627          157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC-E  232 (353)
Q Consensus       157 ~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~---~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~-~  232 (353)
                      ...+++|+.+..+.+.... +.++++.++.....   ..++++|+|+|+|.+|..+++.++..|..+|++++++.++. +
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            3577889999888887776 78888887633222   14799999999999999999999988877899999998875 5


Q ss_pred             HHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHH
Q 018627          233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM  276 (353)
Q Consensus       233 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~  276 (353)
                      .++++|+. +++.    .++.+.+.     .+|+||.|++.+..
T Consensus       218 la~~~g~~-~~~~----~~~~~~l~-----~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPL----DELLELLN-----EADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeH----HHHHHHHh-----cCCEEEECCCCCch
Confidence            66778873 3322    12222222     48999999998655

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02494 adenosylhomocysteinase

Probab=98.16  E-value=2.5e-05  Score=75.79  Aligned_cols=102  Identities=24%  Similarity=0.355  Sum_probs=79.1

Q ss_pred             HHHHHHhccC-CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh
Q 018627          182 LGAAWNVADI-SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       182 ~~al~~~~~~-~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      +.++.+..++ -.|++|+|.|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. +       .+.+.++   
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal~---  308 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVVS---  308 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHHh---
Confidence            3344444443 579999999999999999999999999 8999999888776777777652 1       1223332   


Q ss_pred             cCCccEEEeccCChHH-HHHHHHHhccCCceEEEEcCCC
Q 018627          261 DGGADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                        ..|+++.+.|.... ....+..|+++ +.++.+|...
T Consensus       309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~  344 (477)
T PLN02494        309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD  344 (477)
T ss_pred             --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence              48999999997655 48899999997 9999999854

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.11  E-value=6.5e-05  Score=67.99  Aligned_cols=132  Identities=19%  Similarity=0.184  Sum_probs=84.9

Q ss_pred             ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      +|.+|.. +...++++++++++..+..-...  .....+.+  ...++++||.+|+|. |..++.++ ..|+.+|++++.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~tt~--~~l~~l~~--~~~~~~~VLDiGcGs-G~l~i~~~-~~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHPTTR--LCLEALEK--LVLPGKTVLDVGCGS-GILAIAAA-KLGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCHHHH--HHHHHHHh--hcCCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEEEC
Confidence            5666644 66788999998888776432211  12222211  256899999999986 77766544 467757999999


Q ss_pred             ChhhHHHHHhC----CCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCCh---HHHHHHHHHhccCCceEEEEcCCC
Q 018627          227 NPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT---GMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       227 ~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ++...+.+++.    +....+...             .+. .||+|+.+....   ..+....+.|+++ |+++..|...
T Consensus       151 s~~~l~~A~~n~~~~~~~~~~~~~-------------~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~  216 (250)
T PRK00517        151 DPQAVEAARENAELNGVELNVYLP-------------QGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE  216 (250)
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEc-------------cCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence            99988877542    221111000             011 599999766542   2356677889997 9999987654


Q ss_pred             C
Q 018627          299 L  299 (353)
Q Consensus       299 ~  299 (353)
                      .
T Consensus       217 ~  217 (250)
T PRK00517        217 E  217 (250)
T ss_pred             h
Confidence            3

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.05  E-value=3.1e-05  Score=71.40  Aligned_cols=98  Identities=17%  Similarity=0.305  Sum_probs=73.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++++|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|...+ .+    .++.+.+     ..+|+||++++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~~----~~l~~~l-----~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-PL----NKLEEKV-----AEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-cH----HHHHHHh-----ccCCEEEECCC
Confidence            47999999999999999999999999 99999999988877777775422 11    1222222     25999999987


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCc
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPE  302 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~  302 (353)
                      ....-...++.++++ ..+++++..+...+
T Consensus       219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~td  247 (287)
T TIGR02853       219 ALVLTADVLSKLPKH-AVIIDLASKPGGTD  247 (287)
T ss_pred             hHHhCHHHHhcCCCC-eEEEEeCcCCCCCC
Confidence            543335566788886 88999988765433

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.01  E-value=1.4e-05  Score=73.19  Aligned_cols=104  Identities=25%  Similarity=0.358  Sum_probs=72.0

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      .+.+++|++||.+|+|. |..+.++++..+.. +|++++.+++.++.+++    +|...+...   ..++. .+ ...++
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~---~~d~~-~l-~~~~~  145 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR---LGEIE-AL-PVADN  145 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE---Ecchh-hC-CCCCC
Confidence            35678999999999876 88888888877653 79999999999888866    343322111   11111 11 11234


Q ss_pred             CccEEEecc------CChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          263 GADYSFECI------GDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       263 ~~dvv~d~~------g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .||+|+...      .....+..+++.|+++ |+++..+...
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~  186 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVL  186 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeec
Confidence            899998643      2245789999999997 9999887643

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.96  E-value=0.00013  Score=71.06  Aligned_cols=126  Identities=21%  Similarity=0.304  Sum_probs=85.9

Q ss_pred             ceEECCCCCChhhhhhhchhhhHHHHHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      .++.+|+...-..+-...-.....+.++.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+..
T Consensus       217 PV~nv~d~~tk~~aD~~~G~~~s~~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~  295 (476)
T PTZ00075        217 PAINVNDSVTKSKFDNIYGCRHSLIDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAM  295 (476)
T ss_pred             eEEEeCCcchHHHHHHHHHHHHHHHHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHh
Confidence            355667765444332221111222234434333 4479999999999999999999999999 89999888777655555


Q ss_pred             CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHH-HHHHHhccCCceEEEEcCCC
Q 018627          237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       237 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .|+.. .       ++.+.++     ..|+|+.++|....+. ..+..|+++ +.++.+|...
T Consensus       296 ~G~~~-~-------~leell~-----~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~d  344 (476)
T PTZ00075        296 EGYQV-V-------TLEDVVE-----TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHFD  344 (476)
T ss_pred             cCcee-c-------cHHHHHh-----cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence            56532 1       2233332     5899999998766664 788999997 9999998764

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.87  E-value=0.0001  Score=70.59  Aligned_cols=99  Identities=19%  Similarity=0.252  Sum_probs=70.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|++++++.++.+.+.. ++........+ ...+.+.+     ..+|++|+|+
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l~~~l-----~~aDvVI~a~  238 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEIEDAV-----KRADLLIGAV  238 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHHHHHH-----ccCCEEEEcc
Confidence            34569999999999999999999999 89999999888877654 55432222211 12222222     2589999997


Q ss_pred             C---C--hH-HHHHHHHHhccCCceEEEEcCCCC
Q 018627          272 G---D--TG-MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       272 g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +   .  +. .....++.++++ +.+++++...+
T Consensus       239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G  271 (370)
T TIGR00518       239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG  271 (370)
T ss_pred             ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence            3   2  11 236777889997 99999987544

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK08324 short chain dehydrogenase; Validated

Probab=97.85  E-value=0.00011  Score=76.13  Aligned_cols=138  Identities=22%  Similarity=0.243  Sum_probs=88.1

Q ss_pred             ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc
Q 018627          147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      ++++|..+++..++.+ +..+.+++.....          .......|+++||+|+ |++|..+++.+...|+ +|++++
T Consensus       386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~  453 (681)
T PRK08324        386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD  453 (681)
T ss_pred             hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence            5778888887777777 6666666642110          0122346899999997 9999999999999999 899999


Q ss_pred             CChhhHHHHHh-CCC--c-eE--eCCCCCCccHHHHHHHHh--cCCccEEEeccCCh-----------------------
Q 018627          226 TNPEKCEKAKA-FGV--T-EF--LNPNDNNEPVQQVIKRIT--DGGADYSFECIGDT-----------------------  274 (353)
Q Consensus       226 ~~~~~~~~~~~-~G~--~-~~--~~~~~~~~~~~~~~~~~~--~~~~dvv~d~~g~~-----------------------  274 (353)
                      ++.++.+.+.+ ++.  . ..  .|..+ ...+.+.+.+..  .+++|++|+++|..                       
T Consensus       454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g  532 (681)
T PRK08324        454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG  532 (681)
T ss_pred             CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence            99887665533 432  1 11  23321 223333333321  24799999999831                       


Q ss_pred             --HHHHHHHHHhcc---CCceEEEEcCCC
Q 018627          275 --GMITTALQSCCD---GWGLAVTLGVPK  298 (353)
Q Consensus       275 --~~~~~~~~~l~~---~~G~~v~~g~~~  298 (353)
                        ..++.++..+++   + |+++.+++..
T Consensus       533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~~  560 (681)
T PRK08324        533 HFLVAREAVRIMKAQGLG-GSIVFIASKN  560 (681)
T ss_pred             HHHHHHHHHHHHHhcCCC-cEEEEECCcc
Confidence              123344555555   4 8999998743

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=97.81  E-value=2.6e-06  Score=68.46  Aligned_cols=93  Identities=17%  Similarity=0.310  Sum_probs=53.3

Q ss_pred             CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC--ChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCc
Q 018627          237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG--DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR  314 (353)
Q Consensus       237 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~  314 (353)
                      +||+++++|+  ..++      ...+++|+|||++|  .+..+..+++++ ++ |+++.++.     ... ......+..
T Consensus         1 LGAd~vidy~--~~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-----~~~-~~~~~~~~~   64 (127)
T PF13602_consen    1 LGADEVIDYR--DTDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-----DLP-SFARRLKGR   64 (127)
T ss_dssp             CT-SEEEETT--CSHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-----HHH-HHHHHHHCH
T ss_pred             CCcCEEecCC--Cccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-----ccc-chhhhhccc
Confidence            6999999997  4445      22459999999999  544446666777 96 99999984     111 111111222


Q ss_pred             EEEeeecCC--CC--CCCcHHHHHHHHHcCCCCCC
Q 018627          315 TLKGSLFGG--WK--PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       315 ~i~g~~~~~--~~--~~~~~~~~~~~l~~g~i~~~  345 (353)
                      .+.+..+..  ..  ..+.++++++++.+|+|+|.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~   99 (127)
T PF13602_consen   65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP   99 (127)
T ss_dssp             HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---
T ss_pred             ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe
Confidence            222233221  10  23459999999999999874

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.81  E-value=6.3e-05  Score=65.17  Aligned_cols=118  Identities=17%  Similarity=0.184  Sum_probs=82.8

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHH----HHhCCCce
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTE  241 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~G~~~  241 (353)
                      ++....-.++.+...|.  +.+...+++|++||=+|+| .|..++-+++..+  +|+.+++.++-.+.    ++.+|...
T Consensus        47 lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~n  121 (209)
T COG2518          47 LPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYEN  121 (209)
T ss_pred             ccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence            33334444444444554  3477899999999999986 6999999999887  89999999875444    45688865


Q ss_pred             EeCC-CCCCccHHHHHHHHhc-CCccEEEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          242 FLNP-NDNNEPVQQVIKRITD-GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       242 ~~~~-~~~~~~~~~~~~~~~~-~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +... .+...       .... ++||.|+-+.+.+......+++|+++ |++|.--.
T Consensus       122 V~v~~gDG~~-------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG  170 (209)
T COG2518         122 VTVRHGDGSK-------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG  170 (209)
T ss_pred             eEEEECCccc-------CCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence            4322 21111       1123 38999999988877778899999997 99876543

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.79  E-value=2.1e-05  Score=79.62  Aligned_cols=79  Identities=22%  Similarity=0.320  Sum_probs=58.9

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC---------------------hhhHHHHHhCCCceEeCCCC-
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---------------------PEKCEKAKAFGVTEFLNPND-  247 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~---------------------~~~~~~~~~~G~~~~~~~~~-  247 (353)
                      ....|++|+|+|+|+.|+++++.++.+|+ +|++++..                     +.+++.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            36789999999999999999999999999 78888742                     35667788899887766532 


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      .+... +.+    ..++|+||+++|..
T Consensus       212 ~~~~~-~~~----~~~~D~Vi~AtG~~  233 (564)
T PRK12771        212 EDITL-EQL----EGEFDAVFVAIGAQ  233 (564)
T ss_pred             CcCCH-HHH----HhhCCEEEEeeCCC
Confidence            11111 122    23699999999974

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.61  E-value=0.0013  Score=59.49  Aligned_cols=81  Identities=22%  Similarity=0.292  Sum_probs=56.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCce-EeCCCCCCccHHHHHH-HHh-cC
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE-FLNPNDNNEPVQQVIK-RIT-DG  262 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~-~~~~~~~~~~~~~~~~-~~~-~~  262 (353)
                      ..++++||+|| +++|...+..+...|. +++.+.|+++|++.+.+     .|..- ++..+-.+.+-.+.+. ++. .+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            46789999998 8999999999999999 99999999999887633     33322 3222211333333333 332 22


Q ss_pred             -CccEEEeccCC
Q 018627          263 -GADYSFECIGD  273 (353)
Q Consensus       263 -~~dvv~d~~g~  273 (353)
                       .+|+.++++|.
T Consensus        83 ~~IdvLVNNAG~   94 (265)
T COG0300          83 GPIDVLVNNAGF   94 (265)
T ss_pred             CcccEEEECCCc
Confidence             79999999985

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.58  E-value=0.00013  Score=71.11  Aligned_cols=161  Identities=20%  Similarity=0.181  Sum_probs=99.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCc
Q 018627           66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV  145 (353)
Q Consensus        66 ~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~  145 (353)
                      .-|+|+++.+.+|+++..+.-+|+     +-.    |.+|+ +.+..|..........+                     
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI----lgQvk-~a~~~a~~~g~~g~~l~---------------------  139 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI----LGQVK-DAYALAQEAGTVGTILN---------------------  139 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCC-----hHH----HHHHH-HHHHHHHHcCCchHHHH---------------------
Confidence            459999999999999877644444     322    34555 22333433332111111                     


Q ss_pred             cceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhcc---CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEE
Q 018627          146 SSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGLGTVGLSVAQGAKARGASRII  222 (353)
Q Consensus       146 g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~---~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi  222 (353)
                      +.|++.+        ++|+.+..+.+ ....+.++++.++.....   ..++++|+|+|+|.+|.++++.+...|+.+|+
T Consensus       140 ~lf~~a~--------~~~k~v~~~t~-i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~  210 (423)
T PRK00045        140 RLFQKAF--------SVAKRVRTETG-IGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKIT  210 (423)
T ss_pred             HHHHHHH--------HHHhhHhhhcC-CCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEE
Confidence            2455433        33444333333 222356677777633222   25789999999999999999999999987899


Q ss_pred             EEcCChhhHH-HHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHH
Q 018627          223 GVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM  276 (353)
Q Consensus       223 ~~~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~  276 (353)
                      ++.++.++.+ +++++|.. ++++    .++.+.+     .++|+||+|++.+..
T Consensus       211 v~~r~~~ra~~la~~~g~~-~~~~----~~~~~~l-----~~aDvVI~aT~s~~~  255 (423)
T PRK00045        211 VANRTLERAEELAEEFGGE-AIPL----DELPEAL-----AEADIVISSTGAPHP  255 (423)
T ss_pred             EEeCCHHHHHHHHHHcCCc-EeeH----HHHHHHh-----ccCCEEEECCCCCCc
Confidence            9999988865 56777753 3222    1222222     258999999987543

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.56  E-value=0.00088  Score=56.92  Aligned_cols=103  Identities=19%  Similarity=0.242  Sum_probs=72.4

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ...++++|+.++-+|+| .|...+++++..-..+|++++++++.+++.    ++||.+.+....   .+..+.+..+.  
T Consensus        28 s~L~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~---g~Ap~~L~~~~--  101 (187)
T COG2242          28 SKLRPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE---GDAPEALPDLP--  101 (187)
T ss_pred             HhhCCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe---ccchHhhcCCC--
Confidence            45678999988888885 466677888655555999999999988766    558877654432   22233333221  


Q ss_pred             CccEEEeccCC--hHHHHHHHHHhccCCceEEEEcC
Q 018627          263 GADYSFECIGD--TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       263 ~~dvv~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+|.+|---|.  +..++.+|..++++ |++|.--.
T Consensus       102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai  136 (187)
T COG2242         102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI  136 (187)
T ss_pred             CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence            59999965443  45688999999997 99886544

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.54  E-value=0.0005  Score=60.78  Aligned_cols=79  Identities=22%  Similarity=0.329  Sum_probs=58.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC--ce--EeCCCCCCccHHHHHHHHhcC--Cc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TE--FLNPNDNNEPVQQVIKRITDG--GA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~--~~--~~~~~~~~~~~~~~~~~~~~~--~~  264 (353)
                      .++.++|+|+ +++|.+.++.+...|+ +|+.+.|++++++.+ .+++.  ..  .+|..+ .....+.+..+...  .+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence            4578899998 8999999999999999 999999999998877 44773  11  234332 23444455555444  79


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+++++.|.
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999999985

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.54  E-value=0.0003  Score=57.34  Aligned_cols=97  Identities=26%  Similarity=0.368  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCc--eEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT--EFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      -.++++||+|+|++|.+++..+...|+++|+++.|+.+|.+.+. .++..  ..+.+.    ++.+.+.     .+|+||
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~~~~-----~~DivI   80 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEEALQ-----EADIVI   80 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCHHHH-----TESEEE
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHHHHh-----hCCeEE
Confidence            36899999999999999999999999988999999999887664 45322  233332    2222222     599999


Q ss_pred             eccCChHH--HHHHHHHhccCCceEEEEcCC
Q 018627          269 ECIGDTGM--ITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       269 d~~g~~~~--~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +|++.+..  ....+....+..+.++.++.+
T Consensus        81 ~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P  111 (135)
T PF01488_consen   81 NATPSGMPIITEEMLKKASKKLRLVIDLAVP  111 (135)
T ss_dssp             E-SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred             EecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence            99886432  122222222210467788653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.50  E-value=0.00055  Score=63.30  Aligned_cols=98  Identities=21%  Similarity=0.289  Sum_probs=64.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-EeCCCCCCccHHHHHHHHhcCCcc
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      ..++++||-+|+|. |..++.+++ .|+.+|++++.++...+.+++    .+... +....   .+    ......++||
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~---~~----~~~~~~~~fD  227 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL---IY----LEQPIEGKAD  227 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cc----cccccCCCce
Confidence            45789999999875 776666655 577799999999988777654    22221 11110   11    1112234899


Q ss_pred             EEEeccCCh---HHHHHHHHHhccCCceEEEEcCCC
Q 018627          266 YSFECIGDT---GMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       266 vv~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|+.+....   ..+....+.++++ |+++..|...
T Consensus       228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~~  262 (288)
T TIGR00406       228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGILE  262 (288)
T ss_pred             EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCcH
Confidence            999765432   3456667899997 9999987643

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.44  E-value=0.0021  Score=58.89  Aligned_cols=79  Identities=19%  Similarity=0.317  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHH---hcCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRI---TDGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~---~~~~~dvv  267 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++...+...   ..+.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence            4678999998 9999999999988999 89999999988887777665443 24331 22333333322   23579999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      ++++|.
T Consensus        81 i~~Ag~   86 (277)
T PRK05993         81 FNNGAY   86 (277)
T ss_pred             EECCCc
Confidence            998763

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.40  E-value=0.0024  Score=58.28  Aligned_cols=77  Identities=26%  Similarity=0.391  Sum_probs=55.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEEec
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~d~  270 (353)
                      +++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ...+.+.+....  .+++|++|++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence            57899998 8999999999999999 89999999888777766665433 34431 233333333332  2379999999


Q ss_pred             cCC
Q 018627          271 IGD  273 (353)
Q Consensus       271 ~g~  273 (353)
                      .|.
T Consensus        80 ag~   82 (274)
T PRK05693         80 AGY   82 (274)
T ss_pred             CCC
Confidence            983

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.38  E-value=0.0033  Score=55.82  Aligned_cols=103  Identities=22%  Similarity=0.313  Sum_probs=66.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-Hh---CCCceEe--CCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTEFL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~---~G~~~~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      ++++|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++   .+....+  |..+ ...+.+.+.+..  -++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            4789999998 8999999999999999 899999988877655 22   2322222  2221 222333232221  136


Q ss_pred             ccEEEeccCChH-----------------------HHHHHHHHhccCCceEEEEcCCC
Q 018627          264 ADYSFECIGDTG-----------------------MITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       264 ~dvv~d~~g~~~-----------------------~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|.++.+.+...                       .++..+..++++ |+++.++...
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~  138 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS  138 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence            899999887421                       133444566676 8999998753

>PRK06182 short chain dehydrogenase; Validated

Probab=97.36  E-value=0.0025  Score=58.15  Aligned_cols=79  Identities=20%  Similarity=0.374  Sum_probs=56.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      +++++||+|+ |++|..+++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++.+.+.+..  .+++|++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence            4678999998 8999999999988999 89999999888776665554432 23331 233333344332  23799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus        80 ~~ag~   84 (273)
T PRK06182         80 NNAGY   84 (273)
T ss_pred             ECCCc
Confidence            99874

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.35  E-value=0.0021  Score=53.60  Aligned_cols=94  Identities=21%  Similarity=0.396  Sum_probs=63.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      +-.|++++|.|-|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|+. +.       .+.+.+     ...|++|-+
T Consensus        20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~~~~a~-----~~adi~vta   85 (162)
T PF00670_consen   20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------TLEEAL-----RDADIFVTA   85 (162)
T ss_dssp             --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEEE-
T ss_pred             eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------CHHHHH-----hhCCEEEEC
Confidence            4579999999999999999999999999 999999999887777666754 21       122222     258999999


Q ss_pred             cCChHH-HHHHHHHhccCCceEEEEcCCCC
Q 018627          271 IGDTGM-ITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       271 ~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +|.... -.+.+..|+++ ..+..+|....
T Consensus        86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~d~  114 (162)
T PF00670_consen   86 TGNKDVITGEHFRQMKDG-AILANAGHFDV  114 (162)
T ss_dssp             SSSSSSB-HHHHHHS-TT-EEEEESSSSTT
T ss_pred             CCCccccCHHHHHHhcCC-eEEeccCcCce
Confidence            997553 46778999996 77777776543

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.24  E-value=0.0023  Score=55.28  Aligned_cols=110  Identities=21%  Similarity=0.276  Sum_probs=75.1

Q ss_pred             CCCCEEEEEcC--ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceE-eCCCCCCcc---HHHHHHHHhcCCc
Q 018627          192 SKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF-LNPNDNNEP---VQQVIKRITDGGA  264 (353)
Q Consensus       192 ~~g~~vLV~Ga--g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~-~~~~~~~~~---~~~~~~~~~~~~~  264 (353)
                      +..+.|||+|+  |++|.+++.-....|+ .|+++.|+-+..+.+. ++|.... +|..+ +++   +...++...+|+.
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~-~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSK-PEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCC-hHHHHHHHHHHhhCCCCce
Confidence            34578999974  8999999998889999 9999999999988886 6775432 33321 233   3344555566799


Q ss_pred             cEEEeccCChH----------H--------------HHHHH--HHhccCCceEEEEcCCCCCCcee
Q 018627          265 DYSFECIGDTG----------M--------------ITTAL--QSCCDGWGLAVTLGVPKLKPEVA  304 (353)
Q Consensus       265 dvv~d~~g~~~----------~--------------~~~~~--~~l~~~~G~~v~~g~~~~~~~~~  304 (353)
                      |+.++++|.+-          .              +..++  .+++. .|++|.+|+...-.+++
T Consensus        83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika-KGtIVnvgSl~~~vpfp  147 (289)
T KOG1209|consen   83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA-KGTIVNVGSLAGVVPFP  147 (289)
T ss_pred             EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc-cceEEEecceeEEeccc
Confidence            99999888630          0              11122  24556 49999999866544444

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.24  E-value=0.004  Score=59.39  Aligned_cols=98  Identities=19%  Similarity=0.206  Sum_probs=69.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC---Cce-EeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---VTE-FLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G---~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .+|||+|+|.+|+.+++.+.+.+-.+|++.+++.++.+.+.+..   ... .+|..+ .+.+.+.++     ++|+||++
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-~~al~~li~-----~~d~VIn~   75 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-VDALVALIK-----DFDLVINA   75 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-hHHHHHHHh-----cCCEEEEe
Confidence            57999999999999999998888559999999999998887653   222 233331 223333333     36999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      .+....+...-.+++.+ =.++++.....
T Consensus        76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~~  103 (389)
T COG1748          76 APPFVDLTILKACIKTG-VDYVDTSYYEE  103 (389)
T ss_pred             CCchhhHHHHHHHHHhC-CCEEEcccCCc
Confidence            98766554444566664 67888776654

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.22  E-value=0.0027  Score=61.05  Aligned_cols=109  Identities=17%  Similarity=0.159  Sum_probs=73.9

Q ss_pred             hhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHH
Q 018627          177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI  256 (353)
Q Consensus       177 ~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~  256 (353)
                      +-...+..+.+..++++|++||.+|+| .|..+..+++..|+ +|++++.+++..+.+++......+...  ..++.   
T Consensus       151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~--~~D~~---  223 (383)
T PRK11705        151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIR--LQDYR---  223 (383)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEE--ECchh---
Confidence            334445556677888999999999985 56777888888898 999999999999988764321111110  11221   


Q ss_pred             HHHhcCCccEEEec-----cCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          257 KRITDGGADYSFEC-----IGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       257 ~~~~~~~~dvv~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                       .. .+.||.|+..     +|.   ...+....+.|+|+ |+++...
T Consensus       224 -~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~  267 (383)
T PRK11705        224 -DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT  267 (383)
T ss_pred             -hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence             11 3479988743     332   24577788899997 9988754

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.20  E-value=0.0046  Score=56.47  Aligned_cols=112  Identities=22%  Similarity=0.278  Sum_probs=73.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee----CCCCCCccHHHHHHHH--
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL----NPNDNNEPVQQVIKRI--  259 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~----~~~~~~~~~~~~~~~~--  259 (353)
                      -.|+.|+|+|| +++|.+++.-....|+ +++.+.+..++++.+    ++.+... ++    |.. +..+..+.+.+.  
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs-~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVS-DEESVKKFVEWAIR   87 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccC-CHHHHHHHHHHHHH
Confidence            36889999998 8999999998889999 777776777776655    4445444 22    221 123333333332  


Q ss_pred             hcCCccEEEeccCCh-------------------------HHHHHHHHHhccCC-ceEEEEcCCCCCCceec
Q 018627          260 TDGGADYSFECIGDT-------------------------GMITTALQSCCDGW-GLAVTLGVPKLKPEVAA  305 (353)
Q Consensus       260 ~~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~  305 (353)
                      .-+++|+.++++|-.                         .....++..|++.. |++|.+++..+...+++
T Consensus        88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~  159 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF  159 (282)
T ss_pred             hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence            234899999998842                         12344555555544 99999998777555554

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.20  E-value=0.005  Score=53.59  Aligned_cols=102  Identities=18%  Similarity=0.284  Sum_probs=69.5

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHH----hCC-CceEeCCCCCCccHHHHHHHHh
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFG-VTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~G-~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      ...++.++++||.+|+|. |..++.+++..+. .+|++++.+++..+.++    ++| .+.+....   .+..+.+.. .
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~-~  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT-I  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-c
Confidence            456788999999999976 8888888887642 38999999998887653    356 33322111   122222222 2


Q ss_pred             cCCccEEEeccCC---hHHHHHHHHHhccCCceEEEE
Q 018627          261 DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       261 ~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .+.+|.||...+.   ...+..+.+.|+++ |+++..
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence            3479999986543   34577788899997 998853

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.17  E-value=0.0025  Score=54.88  Aligned_cols=79  Identities=22%  Similarity=0.269  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC--Cce-EeCCCCC--CccHHHHHHHHhcCCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTE-FLNPNDN--NEPVQQVIKRITDGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G--~~~-~~~~~~~--~~~~~~~~~~~~~~~~dv  266 (353)
                      .|.+|||+|+ +++|+++++-...+|- +||.+.|++++++.+++.-  ... +.|..+.  ...+++.+++-.+ ..++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P-~lNv   81 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYP-NLNV   81 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCC-chhe
Confidence            4789999976 8899999999999998 9999999999999987732  111 2333311  1224444443222 5789


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      +++|+|-
T Consensus        82 liNNAGI   88 (245)
T COG3967          82 LINNAGI   88 (245)
T ss_pred             eeecccc
Confidence            9988873

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.17  E-value=0.0036  Score=58.65  Aligned_cols=101  Identities=20%  Similarity=0.255  Sum_probs=71.3

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      +..+++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++    +.|.+.+....   .+..+.+..  .
T Consensus        74 ~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~~--~  147 (322)
T PRK13943         74 EWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVPE--F  147 (322)
T ss_pred             HhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhcccc--c
Confidence            55678899999999987 58888899987763 36999999998766554    36665433221   122221111  1


Q ss_pred             CCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627          262 GGADYSFECIGDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       262 ~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      +.+|+|+.+.+........++.++++ |+++..
T Consensus       148 ~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        148 APYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             CCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence            37999999888766667788999997 998763

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.16  E-value=0.0027  Score=54.37  Aligned_cols=115  Identities=27%  Similarity=0.336  Sum_probs=74.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -.|++|.|+|.|.+|..++++++.+|+ +|++.+++....+...+.++.        ..++.+.+.+     .|+|+.+.
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE--------YVSLDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce--------eeehhhhcch-----hhhhhhhh
Confidence            358999999999999999999999999 999999988877655555542        1234445544     88999887


Q ss_pred             CChH-----HHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC
Q 018627          272 GDTG-----MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG  323 (353)
Q Consensus       272 g~~~-----~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  323 (353)
                      ....     .-...+..|+++ ..+|.++-..- .+.. .....+++-.+.|...--
T Consensus       100 plt~~T~~li~~~~l~~mk~g-a~lvN~aRG~~-vde~-aL~~aL~~g~i~ga~lDV  153 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPG-AVLVNVARGEL-VDED-ALLDALESGKIAGAALDV  153 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTT-EEEEESSSGGG-B-HH-HHHHHHHTTSEEEEEESS
T ss_pred             ccccccceeeeeeeeeccccc-eEEEeccchhh-hhhh-HHHHHHhhccCceEEEEC
Confidence            7321     125667889986 88888875322 1111 122234555565554433

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK12742 oxidoreductase; Provisional

Probab=97.15  E-value=0.0098  Score=52.73  Aligned_cols=102  Identities=19%  Similarity=0.290  Sum_probs=63.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH-HhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~-~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+.+.+ ++++.+.+ .++++..+ .|..+ ...+.+.+.+  .+++|+++
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence            4789999998 8999999999999999 7776644 44554443 44565433 23221 2223333322  24799999


Q ss_pred             eccCChH-------------------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          269 ECIGDTG-------------------------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       269 d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +++|...                         ....+...++.. |+++.++....
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~~  135 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVNG  135 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecccc
Confidence            9987420                         012333445665 89998886543

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.06  E-value=0.049  Score=50.52  Aligned_cols=140  Identities=14%  Similarity=0.152  Sum_probs=87.4

Q ss_pred             ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhcc---CCCCCEEEEEcC-ChHHHHHHHHHH-HCCCCeE
Q 018627          147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD---ISKGSTVVIFGL-GTVGLSVAQGAK-ARGASRI  221 (353)
Q Consensus       147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~---~~~g~~vLV~Ga-g~vG~~a~~la~-~~g~~~v  221 (353)
                      .|-+|.++..+....-  .....++..-+ .+.|.|-. .+...   .-..+.|+|.+| +-.++.++..++ ..+.-++
T Consensus        90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            5667777765543311  12222233333 55666643 23222   233466777787 568888888888 4554488


Q ss_pred             EEEcCChhhHHHHHhCCC-ceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          222 IGVDTNPEKCEKAKAFGV-TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       222 i~~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +++ +|+.+.+..+.+|. +.++.|+        .+..+.....-+++|..|+.......-+.+...--..+.+|..+.
T Consensus       166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd--------~i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~  235 (314)
T PF11017_consen  166 VGL-TSARNVAFVESLGCYDEVLTYD--------DIDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW  235 (314)
T ss_pred             EEE-ecCcchhhhhccCCceEEeehh--------hhhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence            888 66777778888995 4466664        344443346779999999988777777777775345677776554

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.98  E-value=0.013  Score=51.98  Aligned_cols=79  Identities=23%  Similarity=0.309  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCC---CceEe--CCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG---VTEFL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G---~~~~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++.   ....+  +.. +..++.+.+....  .++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVR-DEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCC-CHHHHHHHHHHHHHHcCC
Confidence            4688999998 8999999999888899 899999988776544 2232   11122  222 1233333333322  137


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998764

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.97  E-value=0.0099  Score=56.16  Aligned_cols=79  Identities=27%  Similarity=0.256  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++++.+    ++.|....   .|..+ ..++.+.+....  -+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence            4678999998 8999999999999999 899888988776543    33454332   23321 223333332221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.96  E-value=0.011  Score=53.53  Aligned_cols=79  Identities=20%  Similarity=0.344  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|..++..+...|+ +|++++++.++.+.+ ++++... .  .|..+ ..++.+.+....  .+.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence            4689999998 8999999999999999 999999988765544 4444321 1  23321 233333333321  23789


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      +++.+.|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.011  Score=54.77  Aligned_cols=79  Identities=24%  Similarity=0.311  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC--ceE---eCCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TEF---LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~--~~~---~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .|+++||+|+ |++|..+++.+...|+ +|+++++++++++.+ ++++.  ...   .|..+ ..+..+.+.+..  .++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~   85 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence            5789999998 8999999999999999 899999988876654 33442  111   23321 223333333322  247


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus        86 id~vI~nAG~   95 (296)
T PRK05872         86 IDVVVANAGI   95 (296)
T ss_pred             CCEEEECCCc
Confidence            9999999984

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.87  E-value=0.016  Score=51.83  Aligned_cols=101  Identities=20%  Similarity=0.231  Sum_probs=61.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh-hHHH----HHhCCCce-E--eCCCCCCccHHHHHHHHhc--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~-~~~~----~~~~G~~~-~--~~~~~~~~~~~~~~~~~~~--  261 (353)
                      .++++||+|+ |++|..++..+...|+ +|+++.++.+ +.+.    ++..+... .  .|..+ ..++.+.+.+...  
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence            4689999998 8999999999988999 8888777643 3322    22333221 1  23321 2233333332221  


Q ss_pred             CCccEEEeccCCh-------------------HHHHHHHHHhccCCceEEEEcC
Q 018627          262 GGADYSFECIGDT-------------------GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       262 ~~~dvv~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +++|+++.+.+..                   ..++.+...+... |+++.+++
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence            3689999887642                   1234444555565 89998876

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.87  E-value=0.015  Score=45.92  Aligned_cols=103  Identities=17%  Similarity=0.241  Sum_probs=67.1

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      +...+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++    ++...+....   .+....... ..+
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~   87 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVE---GDAPEALED-SLP   87 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEe---ccccccChh-hcC
Confidence            445677788999999864 8888888888754489999999988777643    4443321111   011000111 123


Q ss_pred             CccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          263 GADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       263 ~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .+|+|+...+.   ...++.+.+.|+++ |+++...
T Consensus        88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        88 EPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             CCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence            79999975433   23678888999997 9988653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.84  E-value=0.019  Score=50.67  Aligned_cols=79  Identities=22%  Similarity=0.261  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHH----HHhCCCceE-eCCCCCCccHHHHHHHHh--cCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      +++++||+|+ |.+|..+++.+...|+ +|++++++.++...    +++.+...+ .|..+ ..++.+.+....  -+++
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   83 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL   83 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence            4789999998 8999999999988899 89999887765332    223333221 22221 222333233221  2379


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+++++.|.
T Consensus        84 d~vi~~ag~   92 (239)
T PRK12828         84 DALVNIAGA   92 (239)
T ss_pred             CEEEECCcc
Confidence            999998874

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.84  E-value=0.01  Score=50.54  Aligned_cols=94  Identities=21%  Similarity=0.290  Sum_probs=62.5

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC--
Q 018627          197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD--  273 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~--  273 (353)
                      |+|+|+ |.+|..+++.+...|. +|++..|++++.+.  ..++..+. .+  -.+. +.+.+... ++|+||.++|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d--~~d~-~~~~~al~-~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GD--LFDP-DSVKAALK-GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SC--TTCH-HHHHHHHT-TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-ee--ehhh-hhhhhhhh-hcchhhhhhhhhc
Confidence            789998 9999999999999998 99999999998877  44444332 22  1122 23333222 69999999984  


Q ss_pred             --hHHHHHHHHHhccC-CceEEEEcCCC
Q 018627          274 --TGMITTALQSCCDG-WGLAVTLGVPK  298 (353)
Q Consensus       274 --~~~~~~~~~~l~~~-~G~~v~~g~~~  298 (353)
                        .......++.++.. -.+++.++...
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccccceeeeccc
Confidence              23344555555443 14788777544

...

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.82  E-value=0.0082  Score=53.02  Aligned_cols=77  Identities=22%  Similarity=0.331  Sum_probs=52.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE--eCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +++||+|+ |++|..++..+...|+ +|+++++++++.+.+++++-...  .|..+ ..++.+.+.....+++|++|.++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a   79 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA   79 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence            57899998 9999999999988999 99999998877766655432222  23221 22333333333334899999987


Q ss_pred             CC
Q 018627          272 GD  273 (353)
Q Consensus       272 g~  273 (353)
                      |.
T Consensus        80 g~   81 (225)
T PRK08177         80 GI   81 (225)
T ss_pred             cc
Confidence            64

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.82  E-value=0.025  Score=48.63  Aligned_cols=102  Identities=23%  Similarity=0.163  Sum_probs=62.6

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhcC-CccE
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDG-GADY  266 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~-~~dv  266 (353)
                      ..+++|++||.+|+|+-+.+.....+..+..+|++++.++..    +..++..+ .+..  +....+.+++..+. ++|+
T Consensus        28 ~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~--~~~~~~~l~~~~~~~~~D~  101 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFT--DEEVLNKIRERVGDDKVDV  101 (188)
T ss_pred             cccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCC--ChhHHHHHHHHhCCCCccE
Confidence            457899999999987545444443344344489999998864    11233322 1222  23334445554444 8999


Q ss_pred             EEecc-----CC------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627          267 SFECI-----GD------------TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       267 v~d~~-----g~------------~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      |+...     |.            ...+..+.+.|+++ |+++.....
T Consensus       102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~~~  148 (188)
T TIGR00438       102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKVFQ  148 (188)
T ss_pred             EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEEcc
Confidence            99532     21            24677788999997 999986543

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=96.82  E-value=0.0019  Score=56.67  Aligned_cols=103  Identities=21%  Similarity=0.299  Sum_probs=66.2

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHH----HhCCCceEe-CCCCCCccHHHHHHHH
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKA----KAFGVTEFL-NPNDNNEPVQQVIKRI  259 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~----~~~G~~~~~-~~~~~~~~~~~~~~~~  259 (353)
                      .+..++++|++||-+|+| .|..++.+++..|.. .|+.+++.++-.+.+    +++|...+. ...  +.  ..-.  .
T Consensus        65 l~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g--dg--~~g~--~  137 (209)
T PF01135_consen   65 LEALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG--DG--SEGW--P  137 (209)
T ss_dssp             HHHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES---G--GGTT--G
T ss_pred             HHHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc--ch--hhcc--c
Confidence            467789999999999875 477777777776642 699999998766555    335665432 111  11  0001  1


Q ss_pred             hcCCccEEEeccCChHHHHHHHHHhccCCceEEE-EcC
Q 018627          260 TDGGADYSFECIGDTGMITTALQSCCDGWGLAVT-LGV  296 (353)
Q Consensus       260 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~-~g~  296 (353)
                      ..++||.|+-+.+.+......++.|+++ |++|. ++.
T Consensus       138 ~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~~  174 (209)
T PF01135_consen  138 EEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIGQ  174 (209)
T ss_dssp             GG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEESS
T ss_pred             cCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEcc
Confidence            1238999999888777778888999997 99887 544

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK08017 oxidoreductase; Provisional

Probab=96.81  E-value=0.0079  Score=54.02  Aligned_cols=77  Identities=27%  Similarity=0.425  Sum_probs=54.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHH---HHHHHhcCCccEEEe
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQ---VIKRITDGGADYSFE  269 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~---~~~~~~~~~~dvv~d  269 (353)
                      +++||+|+ |++|..+++.+...|+ +|++++++.++.+.+++.++..+. |..+ ...+.+   .+.+...+.+|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence            57999998 9999999999999999 899999999988888777765432 3321 222222   222223357899998


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      +.|.
T Consensus        81 ~ag~   84 (256)
T PRK08017         81 NAGF   84 (256)
T ss_pred             CCCC
Confidence            8763

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.81  E-value=0.012  Score=59.06  Aligned_cols=47  Identities=17%  Similarity=0.207  Sum_probs=39.9

Q ss_pred             HhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627          187 NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~  234 (353)
                      +..+.+.|++|||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+
T Consensus        73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l  120 (576)
T PLN03209         73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL  120 (576)
T ss_pred             cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence            3456778999999998 9999999999999999 899988998877644

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.80  E-value=0.017  Score=56.91  Aligned_cols=79  Identities=20%  Similarity=0.350  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHH-HHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCE-KAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~-~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      +++++||+|+ |++|..+++.+...|+ +|+++++++  ++++ ..++++...+ .|..+ .....+.+....  .+++|
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id  286 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD  286 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence            5789999998 9999999999999999 888887643  2222 3344554332 23331 222222222221  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|++.|.
T Consensus       287 ~vi~~AG~  294 (450)
T PRK08261        287 IVVHNAGI  294 (450)
T ss_pred             EEEECCCc
Confidence            99999883

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=96.78  E-value=0.0047  Score=48.02  Aligned_cols=94  Identities=22%  Similarity=0.169  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHH-HCCCCeEEEEcCChhhHHHHHhC----CC-ceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKAF----GV-TEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~-~~g~~~vi~~~~~~~~~~~~~~~----G~-~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      ||++||-+|+| .|..++.+++ ..++ +|++++.+++.++.+++.    +. +.+...   ..++  .......++||+
T Consensus         1 p~~~vLDlGcG-~G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~---~~d~--~~~~~~~~~~D~   73 (112)
T PF12847_consen    1 PGGRVLDLGCG-TGRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFV---QGDA--EFDPDFLEPFDL   73 (112)
T ss_dssp             TTCEEEEETTT-TSHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEE---ESCC--HGGTTTSSCEEE
T ss_pred             CCCEEEEEcCc-CCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEE---ECcc--ccCcccCCCCCE
Confidence            68899999986 4777777777 4677 999999999988877552    22 222111   1122  111112337999


Q ss_pred             EEecc-CC---hH------HHHHHHHHhccCCceEEEE
Q 018627          267 SFECI-GD---TG------MITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       267 v~d~~-g~---~~------~~~~~~~~l~~~~G~~v~~  294 (353)
                      |+... ..   ..      .++...+.|+|+ |+++.-
T Consensus        74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   74 VICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            99876 21   11      367788899997 998863

...

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.76  E-value=0.01  Score=51.98  Aligned_cols=100  Identities=16%  Similarity=0.179  Sum_probs=65.9

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHH----hCCCce---EeCCCCCCccHHHHHH
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVTE---FLNPNDNNEPVQQVIK  257 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~----~~G~~~---~~~~~~~~~~~~~~~~  257 (353)
                      .+..+++++++||-+|+| .|..++.+++..+ ..+|++++.+++-.+.++    +.|...   ++..+     ..+.+.
T Consensus        65 ~~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d-----~~~~~~  138 (205)
T PRK13944         65 CELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD-----GKRGLE  138 (205)
T ss_pred             HHhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC-----cccCCc
Confidence            356678899999999875 4666677777664 238999999988766554    345421   22211     111111


Q ss_pred             HHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627          258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                        ..+.||+|+-+.......+...+.|+++ |+++..
T Consensus       139 --~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        139 --KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             --cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence              1237999987766555667778999997 998764

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.72  E-value=0.017  Score=51.59  Aligned_cols=79  Identities=22%  Similarity=0.328  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC--Cce-Ee--CCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG--VTE-FL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G--~~~-~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ +.  ... .+  |.. +...+...+.+..  .+.
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVS-DEADVEAAVAAALERFGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhCC
Confidence            4678999998 8999999999988999 79999999877655422 22  111 12  222 1233333333221  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.72  E-value=0.01  Score=54.91  Aligned_cols=137  Identities=19%  Similarity=0.257  Sum_probs=74.1

Q ss_pred             ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      .|.++-.-+.+.++.+.+++.|-....-.+.++  ..+|.+  -..+|++||-+|+| .|..++. |..+|+++|+++|.
T Consensus       119 ~w~~~~~~~~~~~I~idPg~AFGTG~H~TT~lc--l~~l~~--~~~~g~~vLDvG~G-SGILaia-A~klGA~~v~a~Di  192 (295)
T PF06325_consen  119 SWEEYPEPPDEIVIEIDPGMAFGTGHHPTTRLC--LELLEK--YVKPGKRVLDVGCG-SGILAIA-AAKLGAKKVVAIDI  192 (295)
T ss_dssp             TT----SSTTSEEEEESTTSSS-SSHCHHHHHH--HHHHHH--HSSTTSEEEEES-T-TSHHHHH-HHHTTBSEEEEEES
T ss_pred             CCcccCCCCCcEEEEECCCCcccCCCCHHHHHH--HHHHHH--hccCCCEEEEeCCc-HHHHHHH-HHHcCCCeEEEecC
Confidence            455552224456778877776554432221111  112222  26788999999864 2333333 33469989999999


Q ss_pred             ChhhHHHHHh----CCCce-E-eCCCCCCccHHHHHHHHhcCCccEEEeccCChHH---HHHHHHHhccCCceEEEEcCC
Q 018627          227 NPEKCEKAKA----FGVTE-F-LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM---ITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       227 ~~~~~~~~~~----~G~~~-~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~---~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ++...+.+++    -|... + +...   .+.       ..++||+|+-++-....   .....+.++++ |.+++.|..
T Consensus       193 Dp~Av~~a~~N~~~N~~~~~~~v~~~---~~~-------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl  261 (295)
T PF06325_consen  193 DPLAVEAARENAELNGVEDRIEVSLS---EDL-------VEGKFDLVVANILADVLLELAPDIASLLKPG-GYLILSGIL  261 (295)
T ss_dssp             SCHHHHHHHHHHHHTT-TTCEEESCT---SCT-------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCeeEEEEEe---ccc-------ccccCCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEcccc
Confidence            9976665543    23222 2 2111   111       12589999988765333   33344678997 999999987


Q ss_pred             CCC
Q 018627          298 KLK  300 (353)
Q Consensus       298 ~~~  300 (353)
                      ..+
T Consensus       262 ~~~  264 (295)
T PF06325_consen  262 EEQ  264 (295)
T ss_dssp             GGG
T ss_pred             HHH
Confidence            653

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.71  E-value=0.0081  Score=56.69  Aligned_cols=79  Identities=24%  Similarity=0.390  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHH--hcC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRI--TDG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~--~~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++++.+    ++.|....   .|..+ .++..+.+.+.  ..+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence            5789999998 8999999999999999 899999998877543    34565432   23321 22222222222  124


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999983

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.013  Score=52.17  Aligned_cols=77  Identities=21%  Similarity=0.380  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceE-eCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ .+...+ .|..  +......+.+. .+++|++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~~v~~~~~~-~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVG--DDAAIRAALAA-AGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCC--CHHHHHHHHHH-hCCCCEEEE
Confidence            5689999998 8999999999999999 89999898877765533 444332 2332  22211222111 237999999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      +.|.
T Consensus        84 ~ag~   87 (245)
T PRK07060         84 CAGI   87 (245)
T ss_pred             CCCC
Confidence            9874

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=96.68  E-value=0.022  Score=50.15  Aligned_cols=100  Identities=21%  Similarity=0.325  Sum_probs=67.2

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CCCceE--eCCCCCCccHHHHHHH
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKR  258 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G~~~~--~~~~~~~~~~~~~~~~  258 (353)
                      .+..+++++++||-+|+| .|..+..+++..+. .+|++++.+++-.+.+++    .|...+  +..+. ...+      
T Consensus        69 ~~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~-~~~~------  140 (212)
T PRK13942         69 CELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG-TLGY------  140 (212)
T ss_pred             HHHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc-ccCC------
Confidence            456788999999999875 46677777777653 389999999988776644    454322  21110 0001      


Q ss_pred             HhcCCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627          259 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       259 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ...+.||+|+-...........++.|+++ |+++..
T Consensus       141 ~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        141 EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence            01237999887655556667788999997 998775

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.031  Score=50.43  Aligned_cols=77  Identities=22%  Similarity=0.231  Sum_probs=52.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC-C-ceE--eCCCCCCccHHHHHHHHh---cCCcc
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG-V-TEF--LNPNDNNEPVQQVIKRIT---DGGAD  265 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G-~-~~~--~~~~~~~~~~~~~~~~~~---~~~~d  265 (353)
                      +++||+|+ |++|..+++.+...|+ +|++++++.++.+.+.+ ++ . ..+  .|..+ ...+.+.+....   .+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence            57999998 8999999999988999 89999898887766643 32 1 112  23331 233333333321   34899


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      +++.++|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99999885

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.031  Score=49.86  Aligned_cols=79  Identities=20%  Similarity=0.232  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..++..+...|+ +|+++++++++.+.+    +..+... ++  |..+ ..++.+.+.+..  -+
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4789999998 8999999999999999 888888887765543    2233222 22  3321 222222222221  14


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++.++|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999885

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.65  E-value=0.03  Score=49.91  Aligned_cols=79  Identities=25%  Similarity=0.367  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE-e--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      +++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++.... +  |..+ ..+....+....  .+++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence            4689999998 9999999999999999 899998887765544 44554321 1  2221 222222222221  23789


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|.++|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.64  E-value=0.013  Score=52.70  Aligned_cols=79  Identities=27%  Similarity=0.380  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      .|++|||+|+ |++|..+++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ ...+.+.+....  .+++|++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            5789999998 9999999999999999 899998888776544 34443322 23321 222333333221  1378999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      +.++|.
T Consensus        84 i~~ag~   89 (255)
T PRK06057         84 FNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            998874

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.62  E-value=0.012  Score=57.03  Aligned_cols=97  Identities=21%  Similarity=0.222  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      --.+.+|||+|+|.+|.+++..+...|+.+++++.|+.++.+.+ .+++....+.+    .++.+.+     ..+|+||.
T Consensus       178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~----~~l~~~l-----~~aDiVI~  248 (414)
T PRK13940        178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL----SELPQLI-----KKADIIIA  248 (414)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH----HHHHHHh-----ccCCEEEE
Confidence            34688999999999999999999999988899999998886655 44552222222    1122222     25999999


Q ss_pred             ccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          270 CIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       270 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      |++.+..+-. .+.++...=-+++++.+
T Consensus       249 aT~a~~~vi~-~~~~~~~~~~~iDLavP  275 (414)
T PRK13940        249 AVNVLEYIVT-CKYVGDKPRVFIDISIP  275 (414)
T ss_pred             CcCCCCeeEC-HHHhCCCCeEEEEeCCC
Confidence            9998654321 11222110235677654

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.57  E-value=0.027  Score=47.68  Aligned_cols=97  Identities=19%  Similarity=0.291  Sum_probs=63.7

Q ss_pred             hhhchhhhHHHHHHHHhccCCCCCEEEEEcCCh-HHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       172 a~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~-vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      ...|+....+...+.+...--.|++|||+|+|. +|..++..++..|+ +|+.+.++.+                     
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------   79 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------   79 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence            334443333333333333345789999999986 69989999999999 7888765421                     


Q ss_pred             cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ++.+.++     .+|+||.+++.+..+..  +.++++ -.++.++.+.
T Consensus        80 ~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr  119 (168)
T cd01080          80 NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR  119 (168)
T ss_pred             hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence            2223333     38999999998664433  356775 7788887654

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.016  Score=50.93  Aligned_cols=77  Identities=21%  Similarity=0.288  Sum_probs=53.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +++||+|+ |++|..+++.+...|+ +|++++++.++.+.++..+... ..|..+ ...+.+.+.....+++|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence            47899987 8999999998888899 8999989888877776666432 223331 223333322332337999999887


Q ss_pred             C
Q 018627          273 D  273 (353)
Q Consensus       273 ~  273 (353)
                      .
T Consensus        80 ~   80 (222)
T PRK06953         80 V   80 (222)
T ss_pred             c
Confidence            5

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.032  Score=50.18  Aligned_cols=79  Identities=16%  Similarity=0.215  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh---CCCce-Ee--CCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-FL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .|+++||+|+ |++|..+++.+...|+ +|+++++++++.+..++   .+... .+  |..+ ...+...+.+..  .++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence            4679999998 8999999999999999 78888888776544333   34321 22  2221 222333333322  247


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.++|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            8999999983

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.56  E-value=0.0064  Score=51.49  Aligned_cols=103  Identities=21%  Similarity=0.235  Sum_probs=67.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC-CCCC--------------CccHHHHHHH
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN-PNDN--------------NEPVQQVIKR  258 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~-~~~~--------------~~~~~~~~~~  258 (353)
                      ..+|+|+|+|.+|+.|+.+++.+|+ +++..+...++++..+..++..+.. +.+.              .....+.+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            4789999999999999999999999 9999999999998888887765432 1110              1122222222


Q ss_pred             HhcCCccEEEeccC-----ChH-HHHHHHHHhccCCceEEEEcCCCC
Q 018627          259 ITDGGADYSFECIG-----DTG-MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       259 ~~~~~~dvv~d~~g-----~~~-~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      ... .+|+++.+.-     .+. ..+..++.|+++ ..++++....+
T Consensus        99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g  143 (168)
T PF01262_consen   99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG  143 (168)
T ss_dssp             HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred             HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence            211 4788885431     122 235667889986 88888876444

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.55  E-value=0.017  Score=52.30  Aligned_cols=81  Identities=20%  Similarity=0.318  Sum_probs=53.4

Q ss_pred             CCCCCEEEEEcC-C-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCceE--e--CCCCCCccHHHHHHHH
Q 018627          191 ISKGSTVVIFGL-G-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTEF--L--NPNDNNEPVQQVIKRI  259 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~~--~--~~~~~~~~~~~~~~~~  259 (353)
                      +..++++||+|+ | ++|.++++.+...|+ +|+++++++++.+...+     +|...+  +  |..+ ...+...+...
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~   91 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA   91 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence            345789999987 6 799999999999999 89998888876654422     453322  2  3321 22233333322


Q ss_pred             h--cCCccEEEeccCC
Q 018627          260 T--DGGADYSFECIGD  273 (353)
Q Consensus       260 ~--~~~~dvv~d~~g~  273 (353)
                      .  .+++|++|+++|.
T Consensus        92 ~~~~g~id~li~~ag~  107 (262)
T PRK07831         92 VERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            1  2478999999984

>PRK06128 oxidoreductase; Provisional

Probab=96.55  E-value=0.029  Score=51.99  Aligned_cols=79  Identities=24%  Similarity=0.286  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh--h----HHHHHhCCCceE-e--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--K----CEKAKAFGVTEF-L--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~--~----~~~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ |++|.+++..+...|+ +|+.+.++.+  .    .+.+++.|.... +  |..+ ...+.+.+.+..  
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence            5789999998 8999999999999999 7777655432  1    223344453322 1  2221 222333333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++|.++|.
T Consensus       132 ~g~iD~lV~nAg~  144 (300)
T PRK06128        132 LGGLDILVNIAGK  144 (300)
T ss_pred             hCCCCEEEECCcc
Confidence            2379999999874

>PRK06484 short chain dehydrogenase; Validated

Probab=96.52  E-value=0.03  Score=56.03  Aligned_cols=105  Identities=24%  Similarity=0.298  Sum_probs=68.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceE---eCCCCCCccHHHHHHHHh--cCCc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEF---LNPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      ..|+.+||+|+ +++|..+++.+...|+ +|+++++++++++.+.+ ++....   .|..+ ..+..+.+.+..  -+.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            35789999998 8999999999999999 89999998887776644 443321   23321 223333333322  2479


Q ss_pred             cEEEeccCChH--------------------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          265 DYSFECIGDTG--------------------------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       265 dvv~d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      |++|+++|...                          ..+.++..++.+ |+++.+++...
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~~  404 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIAS  404 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchhh
Confidence            99999987420                          122333455565 99999987433

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.51  E-value=0.015  Score=52.68  Aligned_cols=78  Identities=21%  Similarity=0.255  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CCce-E--eCCCCCCccHHHHHHHHhc--CCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTE-F--LNPNDNNEPVQQVIKRITD--GGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~~~-~--~~~~~~~~~~~~~~~~~~~--~~~d  265 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+++. +... .  .|..+ ..+..+.+.+...  +.+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence            4789999998 8999999999999999 899998988877666543 3211 1  13221 2233333333222  3789


Q ss_pred             EEEeccC
Q 018627          266 YSFECIG  272 (353)
Q Consensus       266 vv~d~~g  272 (353)
                      +++++.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999987

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.50  E-value=0.053  Score=48.26  Aligned_cols=93  Identities=22%  Similarity=0.276  Sum_probs=61.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCC--eEEEEcCC----hhh--------HHHHHhCCCceEeCCCCCCccHHHHHH
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGAS--RIIGVDTN----PEK--------CEKAKAFGVTEFLNPNDNNEPVQQVIK  257 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~--~vi~~~~~----~~~--------~~~~~~~G~~~~~~~~~~~~~~~~~~~  257 (353)
                      -.+++++|+|+|+.|..++..+...|++  +++.++++    .++        .+++++++... .     ..++.+.++
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~l~   96 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEALK   96 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHHHh
Confidence            4578999999999999999999999997  89999998    443        33444443211 0     113333442


Q ss_pred             HHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                           .+|+++++++....-...++.+.+. ..+..+..
T Consensus        97 -----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~lsn  129 (226)
T cd05311          97 -----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALAN  129 (226)
T ss_pred             -----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeCC
Confidence                 3899999987322224556777775 65555543

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.49  E-value=0.046  Score=49.74  Aligned_cols=77  Identities=22%  Similarity=0.312  Sum_probs=49.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce----EeCCCCCCccHHHHHHHHh--cCC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE----FLNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~----~~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      +++||+|+ |++|..+++.+...|+ +|+++++++++.+.+    +..+...    ..|..+ .....+.+.+..  .++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   78 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGS   78 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCC
Confidence            36899998 8999999999999999 888888887765433    3334322    123331 222222222221  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|+++|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK04148 hypothetical protein; Provisional

Probab=96.48  E-value=0.089  Score=42.56  Aligned_cols=98  Identities=21%  Similarity=0.214  Sum_probs=67.1

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      ....++.++|++|.| .|..++..+..+|. .|+++|.+++..+.+++.+...+.+--. +.++  .+    -+++|+++
T Consensus        12 ~~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~--~~----y~~a~liy   82 (134)
T PRK04148         12 YEKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL--EI----YKNAKLIY   82 (134)
T ss_pred             cccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH--HH----HhcCCEEE
Confidence            334457889999998 88766666668898 9999999999999998888765543211 1221  11    13799999


Q ss_pred             eccCChHHHHHHHHHhccCCceEEEEc
Q 018627          269 ECIGDTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       269 d~~g~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .+=..++.....++..++-...++..-
T Consensus        83 sirpp~el~~~~~~la~~~~~~~~i~~  109 (134)
T PRK04148         83 SIRPPRDLQPFILELAKKINVPLIIKP  109 (134)
T ss_pred             EeCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence            888777776666666665423444443

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.014  Score=52.68  Aligned_cols=83  Identities=20%  Similarity=0.224  Sum_probs=54.4

Q ss_pred             ccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCc--eE--eCCCCCCccHHHHHHHHh--
Q 018627          189 ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT--EF--LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       189 ~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~--~~--~~~~~~~~~~~~~~~~~~--  260 (353)
                      ...-+++++||+|+ |.+|..++..+...|+ +|++++++++..+.+.+ ..-.  ..  .|..+ ...+.+.+.+..  
T Consensus         6 ~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   83 (264)
T PRK12829          6 LKPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVER   83 (264)
T ss_pred             hhccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHH
Confidence            34457899999998 8999999999999999 89999998776665543 2211  12  22221 222222222221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|+||.+.|.
T Consensus        84 ~~~~d~vi~~ag~   96 (264)
T PRK12829         84 FGGLDVLVNNAGI   96 (264)
T ss_pred             hCCCCEEEECCCC
Confidence            1379999998875

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.48  E-value=0.017  Score=52.28  Aligned_cols=79  Identities=20%  Similarity=0.268  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCc-eEe--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~-~~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      +++++||+|+ +++|..+++.+...|+ +|+.+++++++.+.+.+ ++.. ..+  |..+ ..++...+.+..  .+.+|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence            5789999998 8999999999999999 89999999887776644 3321 122  2221 223333333322  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        83 ~li~~ag~   90 (263)
T PRK06200         83 CFVGNAGI   90 (263)
T ss_pred             EEEECCCC
Confidence            99999873

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=96.47  E-value=0.031  Score=50.33  Aligned_cols=79  Identities=28%  Similarity=0.306  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH---hCCCceE---eCCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK---AFGVTEF---LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~---~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++...+..+   +.+....   .|..+ ..+..+.+.+..  .+.
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence            4689999998 8999999999999999 8998888754333332   3343321   23321 223333333322  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|+++.++|.
T Consensus        85 id~lv~nAg~   94 (260)
T PRK12823         85 IDVLINNVGG   94 (260)
T ss_pred             CeEEEECCcc
Confidence            9999999873

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.45  E-value=0.016  Score=52.03  Aligned_cols=80  Identities=18%  Similarity=0.277  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCC-ceEe--CCCCCCccHHHHHHHHh--c
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV-TEFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~-~~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      ..++++||+|+ |.+|..++..+...|+ +|+++.+++++++.+.+    .+. ..++  |..+ ..++.+.+.+..  .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence            35789999998 9999999999999999 89999998887654422    221 1222  2221 233333333321  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|+++++.|.
T Consensus        85 ~~~d~li~~ag~   96 (258)
T PRK06949         85 GTIDILVNNSGV   96 (258)
T ss_pred             CCCCEEEECCCC
Confidence            378999999883

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.016  Score=52.47  Aligned_cols=79  Identities=14%  Similarity=0.201  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc-eE--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EF--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~-~~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      +++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+    .+.. .+  .|..+ ...+.+.+.+..  -+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 8899999999999999 99999898876554422    2322 12  23321 222222222221  14


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.018  Score=51.66  Aligned_cols=79  Identities=22%  Similarity=0.265  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~--~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+.+.++++..+...++....  .  .|..+ ..++.+.+.+..  .+++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence            5789999998 8999999999998999 8999988877655554442211  2  23221 223333333221  13789


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      +++.++|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99999874

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.41  E-value=0.02  Score=53.68  Aligned_cols=80  Identities=19%  Similarity=0.291  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCce----EeCCCCCCccHHHHHHHHhcC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE----FLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~----~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      .|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+.+     .+...    ..|..++..+..+.+.+..++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            4899999998 8999999998888999 89999999988765422     22111    123321112334444444444


Q ss_pred             -CccEEEeccCC
Q 018627          263 -GADYSFECIGD  273 (353)
Q Consensus       263 -~~dvv~d~~g~  273 (353)
                       .+|++++++|.
T Consensus       131 ~didilVnnAG~  142 (320)
T PLN02780        131 LDVGVLINNVGV  142 (320)
T ss_pred             CCccEEEEecCc
Confidence             57799998873

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.41  E-value=0.061  Score=49.21  Aligned_cols=104  Identities=18%  Similarity=0.258  Sum_probs=65.4

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChh---hHHHH-HhCCCceE--eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~-~~~G~~~~--~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++.+||+|+   +++|+++++.+...|+ +|+.++++++   +.+.+ ++++....  .|..+ .....+.+.+..  .
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence            4789999986   4899999999999999 8888888753   33333 44553322  23331 223333333332  2


Q ss_pred             CCccEEEeccCCh--------------H---------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          262 GGADYSFECIGDT--------------G---------------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       262 ~~~dvv~d~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +.+|++++++|..              +               ..+..+..+.++ |+++.+++...
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~~  147 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLGG  147 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCCC
Confidence            4799999998831              0               123344556776 99998876543

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.40  E-value=0.023  Score=56.55  Aligned_cols=73  Identities=22%  Similarity=0.253  Sum_probs=55.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      +.+|++|+|+|.|..|++++++++..|+ +|+++|.++++.+.++++|+..+. ..    ...+.+.     .+|+|+.+
T Consensus         9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~-~~----~~~~~l~-----~~D~VV~S   77 (488)
T PRK03369          9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVS-TS----DAVQQIA-----DYALVVTS   77 (488)
T ss_pred             ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEc-Cc----chHhHhh-----cCCEEEEC
Confidence            5678999999999999999999999999 999999887777777778874332 11    1112222     47999998


Q ss_pred             cCCh
Q 018627          271 IGDT  274 (353)
Q Consensus       271 ~g~~  274 (353)
                      .|-+
T Consensus        78 pGi~   81 (488)
T PRK03369         78 PGFR   81 (488)
T ss_pred             CCCC
Confidence            8864

>PRK09186 flagellin modification protein A; Provisional

Probab=96.39  E-value=0.044  Score=49.12  Aligned_cols=78  Identities=23%  Similarity=0.472  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-Hh----CCCce--E--eCCCCCCccHHHHHHHHhc-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA----FGVTE--F--LNPNDNNEPVQQVIKRITD-  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~----~G~~~--~--~~~~~~~~~~~~~~~~~~~-  261 (353)
                      .++++||+|+ |++|..++..+...|+ +|+.+.+++++.+.+ ++    ++...  +  .|..+ ..++.+.+.+... 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence            5789999998 8999999999999999 898888887776543 22    22221  1  23321 2333333433221 


Q ss_pred             -CCccEEEeccC
Q 018627          262 -GGADYSFECIG  272 (353)
Q Consensus       262 -~~~dvv~d~~g  272 (353)
                       +++|+++.+.+
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence             36899999985

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.37  E-value=0.011  Score=54.08  Aligned_cols=99  Identities=18%  Similarity=0.257  Sum_probs=60.6

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E-eCCCCCCccHHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F-LNPNDNNEPVQQVIKR  258 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~-~~~~~~~~~~~~~~~~  258 (353)
                      +.+++++++|++||-+|+| -|..+..+++..|+ +|+++..|+++.+.++    +.|... + +...    ++    ++
T Consensus        54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~----D~----~~  123 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ----DY----RD  123 (273)
T ss_dssp             HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-----G----GG
T ss_pred             HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe----ec----cc
Confidence            4578899999999999986 56677788888899 9999999999988774    456432 1 1111    11    11


Q ss_pred             HhcCCccEEEe-----ccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          259 ITDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       259 ~~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      + .+.||.|+.     .+|.   +..+....+.|+|+ |++++-.
T Consensus       124 ~-~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~  166 (273)
T PF02353_consen  124 L-PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT  166 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred             c-CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            1 227998875     3432   34577777899997 9987543

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.023  Score=51.64  Aligned_cols=78  Identities=23%  Similarity=0.283  Sum_probs=52.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE--eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~--~~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      ++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++....  .|..+ ..++.+.+....  .+++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            678999998 8999999998888999 898888988877654 33441222  23331 233333333322  2479999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      ++++|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999874

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.36  E-value=0.025  Score=49.86  Aligned_cols=102  Identities=19%  Similarity=0.242  Sum_probs=65.2

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHh
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      .+..+++++++||-+|+| .|..++.+++..+. .+|++++.+++-.+.++    ++|.+.+....   .+..+...  .
T Consensus        70 ~~~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~---~d~~~~~~--~  143 (215)
T TIGR00080        70 TELLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIV---GDGTQGWE--P  143 (215)
T ss_pred             HHHhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEE---CCcccCCc--c
Confidence            356678999999999875 46666667766542 26999999998777664    35543321111   11111110  1


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627          261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .+.||+|+-....+......++.|+++ |+++..
T Consensus       144 ~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       144 LAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             cCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence            237998886554445667788999997 998765

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.34  E-value=0.054  Score=47.72  Aligned_cols=104  Identities=24%  Similarity=0.277  Sum_probs=72.9

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      .++.+..++||=+|.+ +|..++++|..+. -.+++.+++++++.+.+++    .|..+.+.... ..+..+.+.+...+
T Consensus        54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~-~gdal~~l~~~~~~  131 (219)
T COG4122          54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL-GGDALDVLSRLLDG  131 (219)
T ss_pred             HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe-cCcHHHHHHhccCC
Confidence            3556678888888753 6888888888886 3389999999999887744    68776432220 12455555554456


Q ss_pred             CccEEEeccC---ChHHHHHHHHHhccCCceEEEE
Q 018627          263 GADYSFECIG---DTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       263 ~~dvv~d~~g---~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .||.||--+.   .+..++.++++++++ |.+|.=
T Consensus       132 ~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~D  165 (219)
T COG4122         132 SFDLVFIDADKADYPEYLERALPLLRPG-GLIVAD  165 (219)
T ss_pred             CccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEe
Confidence            9998876444   256789999999996 777643

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.32  E-value=0.036  Score=47.78  Aligned_cols=97  Identities=18%  Similarity=0.184  Sum_probs=61.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      ++++++||-+|+| .|..++.+++.....+|++++.+++..+.++    +.+...+-..   ..+..+ +..  .+.||+
T Consensus        43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~---~~d~~~-~~~--~~~fDl  115 (187)
T PRK00107         43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVV---HGRAEE-FGQ--EEKFDV  115 (187)
T ss_pred             cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEE---eccHhh-CCC--CCCccE
Confidence            4568999999874 3455555555443339999999998776664    3554432111   122221 111  348999


Q ss_pred             EEeccCC--hHHHHHHHHHhccCCceEEEEc
Q 018627          267 SFECIGD--TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       267 v~d~~g~--~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      |+-....  ...+..+.+.++++ |+++.+-
T Consensus       116 V~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        116 VTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             EEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            9974322  35677888999997 9999884

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=96.32  E-value=0.026  Score=50.42  Aligned_cols=79  Identities=22%  Similarity=0.333  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh--hHHHHHhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      .|+++||+|+ |++|..++..+...|+ +|+.+++++.  ..+.+++.+... .+  |..+ ..++...+.+..  .+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence            5789999998 8999999999999999 8988887652  233344455322 22  3221 233333333322  2379


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+++.+.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.02  Score=51.44  Aligned_cols=79  Identities=22%  Similarity=0.254  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ +++|.++++.+...|+ +|++++++.++.+.+.    +.+... .  .|..+ ..++.+.+.+..  -+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            4789999998 8999999999999999 8999989887765442    223221 1  23321 233333333321  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++.+.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.30  E-value=0.043  Score=50.58  Aligned_cols=44  Identities=25%  Similarity=0.372  Sum_probs=39.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK  235 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~  235 (353)
                      ..+++|+|+|+|+.|.+++..+..+|+++|++++++.+|.+.+.
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la  168 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA  168 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            35689999999999999999999999989999999998877663

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.29  E-value=0.053  Score=49.44  Aligned_cols=78  Identities=18%  Similarity=0.220  Sum_probs=51.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCc-eEe--CCCCCCccHHHHHHHHh--cCCccE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EFL--NPNDNNEPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~-~~~--~~~~~~~~~~~~~~~~~--~~~~dv  266 (353)
                      +++|||+|+ |++|..+++.+...|. +|++++++.++++.+.+ ++.. ..+  |..+ ...+.+.+....  -+++|+
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            468999998 8999999999888898 89999898887665543 2211 112  2221 223333333221  237899


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      ++.++|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999884

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.043  Score=50.38  Aligned_cols=95  Identities=20%  Similarity=0.364  Sum_probs=65.9

Q ss_pred             hhchhhhHHHHHHHHhccC-CCCCEEEEEcCCh-HHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       173 ~l~~~~~ta~~al~~~~~~-~~g~~vLV~Gag~-vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      .+||+....+..+ +..++ -.|++|+|+|.|. +|.-++.++...|+ +|+.+.+..                     .
T Consensus       137 ~~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~  193 (286)
T PRK14175        137 FVPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------K  193 (286)
T ss_pred             CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------h
Confidence            3454433333333 44442 3699999999865 99999999999999 888885431                     1


Q ss_pred             cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ++.+.++     .+|+||.++|.+..+..  ..++++ ..++.+|...
T Consensus       194 ~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~  233 (286)
T PRK14175        194 DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP  233 (286)
T ss_pred             hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence            2333333     38999999998766655  458886 8889998754

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.29  E-value=0.029  Score=46.44  Aligned_cols=98  Identities=20%  Similarity=0.213  Sum_probs=62.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      ..+++++|+|+|.+|..+++.+...|..+|++++++.++.+.+ ++++... +...  ..+..+.     -+++|+|+.|
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~--~~~~~~~-----~~~~Dvvi~~   88 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIA--YLDLEEL-----LAEADLIINT   88 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-ccee--ecchhhc-----cccCCEEEeC
Confidence            4578999999999999999999888644899999998876654 4455321 0000  1111111     1369999999


Q ss_pred             cCChHH----HHHHHHHhccCCceEEEEcCCC
Q 018627          271 IGDTGM----ITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       271 ~g~~~~----~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ++....    .......++++ ..++.++..+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~~  119 (155)
T cd01065          89 TPVGMKPGDELPLPPSLLKPG-GVVYDVVYNP  119 (155)
T ss_pred             cCCCCCCCCCCCCCHHHcCCC-CEEEEcCcCC
Confidence            886432    11122446675 7777776553

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.28  E-value=0.013  Score=54.06  Aligned_cols=75  Identities=13%  Similarity=0.104  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-EeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .++++||+|+|+.+.+++..+..+|+++|+++.|+.+|.+.+.+ ++... +....    .+ +.+... -..+|+|++|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~-~~~~~~-~~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GD-SGGLAI-EKAAEVLVST  197 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----ch-hhhhhc-ccCCCEEEEC
Confidence            57899999999999999999999999899999999888776633 33211 11110    00 111111 1368999999


Q ss_pred             cCC
Q 018627          271 IGD  273 (353)
Q Consensus       271 ~g~  273 (353)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            875

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.28  E-value=0.042  Score=51.24  Aligned_cols=92  Identities=21%  Similarity=0.416  Sum_probs=62.4

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      .+|.|+|.|.+|.+.+..++..|. .+|+++++++++.+.+++.|......     .+..+.+     ...|+||.|+..
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~~-----~~aDvViiavp~   76 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEAV-----KGADLVILCVPV   76 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHHh-----cCCCEEEECCCH
Confidence            679999999999999999888884 37999999999988888887532211     1122222     258999999876


Q ss_pred             hHH---HHHHHHHhccCCceEEEEcCC
Q 018627          274 TGM---ITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       274 ~~~---~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ...   +......++++ ..++.+|..
T Consensus        77 ~~~~~v~~~l~~~l~~~-~iv~dvgs~  102 (307)
T PRK07502         77 GASGAVAAEIAPHLKPG-AIVTDVGSV  102 (307)
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEeCccc
Confidence            322   22223345664 666676653

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.025  Score=51.70  Aligned_cols=79  Identities=23%  Similarity=0.278  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--E--eCCCCCCccHHHHHHHHhc--CCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRITD--GGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~--~~~~~~~~~~~~~~~~~~~--~~~d  265 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+.+.....  .  .|..+ ...+.+.+.....  +.+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence            3578999998 8999999999999999 8999999988877665432211  1  23321 2223333333221  3689


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999885

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.28  E-value=0.07  Score=47.78  Aligned_cols=76  Identities=14%  Similarity=0.295  Sum_probs=51.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-E--eCCCCCCccHHHHHHHHhc--CCccEEE
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRITD--GGADYSF  268 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~--~~~~~~~~~~~~~~~~~~~--~~~dvv~  268 (353)
                      ++||+|+ |++|.+++..+...|+ +|+++++++++.+.+.+ ++... .  .|..+ ..++.+.+.....  +++|+++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            6899997 8999999999999999 89999999887766543 34322 1  23221 2233333333221  3799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      .++|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            98874

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.27  E-value=0.048  Score=48.70  Aligned_cols=108  Identities=19%  Similarity=0.203  Sum_probs=75.2

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC----CCceEeCCCCCCccHHHHHHHHh
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      +.+.....+|++||=+++| .|-.+..+++..|-.+|+++|.++.-++.+++-    |... +.+.  ..+ ++.+. +.
T Consensus        43 ~i~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv--~~d-Ae~LP-f~  116 (238)
T COG2226          43 LISLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFV--VGD-AENLP-FP  116 (238)
T ss_pred             HHHhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEE--Eec-hhhCC-CC
Confidence            3445566799999999775 688999999999766999999999988887652    2221 1110  111 11222 23


Q ss_pred             cCCccEEEeccCC------hHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          261 DGGADYSFECIGD------TGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       261 ~~~~dvv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +..||+|.-+.|-      +..+.+..+-++|+ |+++.+.....
T Consensus       117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p  160 (238)
T COG2226         117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP  160 (238)
T ss_pred             CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence            3489988876663      45688889999997 99998887654

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.27  E-value=0.026  Score=51.94  Aligned_cols=140  Identities=20%  Similarity=0.237  Sum_probs=78.6

Q ss_pred             ceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHh-ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEc
Q 018627          147 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       147 ~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~-~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      +|.+|..-....++++.+++.+-..    ..-+|.+ +|.-. .-+++|++||-+|+| .|..++. +..+|++.|+++|
T Consensus       120 sw~~~~~~~~~~~i~lDPGlAFGTG----~HpTT~l-cL~~Le~~~~~g~~vlDvGcG-SGILaIA-a~kLGA~~v~g~D  192 (300)
T COG2264         120 SWREYPEPSDELNIELDPGLAFGTG----THPTTSL-CLEALEKLLKKGKTVLDVGCG-SGILAIA-AAKLGAKKVVGVD  192 (300)
T ss_pred             CCccCCCCCCceEEEEccccccCCC----CChhHHH-HHHHHHHhhcCCCEEEEecCC-hhHHHHH-HHHcCCceEEEec
Confidence            3444432223567777777644322    1222222 22111 125699999999975 2444433 4456888999999


Q ss_pred             CChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh---HHHHHHHHHhccCCceEEEEcCCC
Q 018627          226 TNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       226 ~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .++-..+.+++    -+.... +... ..+   ......++.||+|+-++=..   .........++|+ |++++.|-..
T Consensus       193 iDp~AV~aa~eNa~~N~v~~~-~~~~-~~~---~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~  266 (300)
T COG2264         193 IDPQAVEAARENARLNGVELL-VQAK-GFL---LLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGILE  266 (300)
T ss_pred             CCHHHHHHHHHHHHHcCCchh-hhcc-ccc---chhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehH
Confidence            99876665544    233320 0000 000   11111234899999776321   2356667889997 9999999765


Q ss_pred             C
Q 018627          299 L  299 (353)
Q Consensus       299 ~  299 (353)
                      .
T Consensus       267 ~  267 (300)
T COG2264         267 D  267 (300)
T ss_pred             h
Confidence            5

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=96.26  E-value=0.063  Score=46.40  Aligned_cols=76  Identities=29%  Similarity=0.365  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CCceE-eCCCCCCccHHHHHHHHhcCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTEF-LNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~~~~-~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      .+.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+.+ +    +..-. .+.. +..++.+.+     .+.|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~-~~~~~~~~~-----~~~d   99 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETS-DDAARAAAI-----KGAD   99 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCC-CHHHHHHHH-----hcCC
Confidence            5789999997 9999999988888897 89988898887765533 2    22211 1111 012222222     2589


Q ss_pred             EEEeccCChH
Q 018627          266 YSFECIGDTG  275 (353)
Q Consensus       266 vv~d~~g~~~  275 (353)
                      +||.+++...
T Consensus       100 iVi~at~~g~  109 (194)
T cd01078         100 VVFAAGAAGV  109 (194)
T ss_pred             EEEECCCCCc
Confidence            9999887543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.25  E-value=0.027  Score=50.25  Aligned_cols=78  Identities=29%  Similarity=0.372  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHhc--C
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~~--~  262 (353)
                      +++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+    +..+... .  .|..+ ...+.+.+.....  +
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            4789999998 9999999999999999 899998888765543    2334332 1  22221 2233333333222  3


Q ss_pred             CccEEEeccC
Q 018627          263 GADYSFECIG  272 (353)
Q Consensus       263 ~~dvv~d~~g  272 (353)
                      ++|++|+++|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            7899999987

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.25  E-value=0.031  Score=51.67  Aligned_cols=79  Identities=19%  Similarity=0.350  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++++.+.+    .+... .+  |..+ ..++.+.+....  .+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4688999998 8999999999988999 89999999877654422    23322 22  2221 223333333221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++++++|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.24  E-value=0.029  Score=50.89  Aligned_cols=79  Identities=23%  Similarity=0.339  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CCce-E--eCCCCCCccHHHHHHHHh-cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-F--LNPNDNNEPVQQVIKRIT-DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~~~-~--~~~~~~~~~~~~~~~~~~-~~  262 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++++.+.+ +    +... .  .|..+ ..+..+.+.+.. -+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g   84 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG   84 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence            5789999998 8999999999999999 89999998877654432 1    3221 2  23321 223333333321 24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus        85 ~iD~lv~nag~   95 (263)
T PRK08339         85 EPDIFFFSTGG   95 (263)
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.22  E-value=0.16  Score=44.38  Aligned_cols=100  Identities=16%  Similarity=0.074  Sum_probs=59.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .|++|||+|+|.+|...+..+...|+ +|+++.... +.+..+.+.+.-.....     .+.+.    .-.++|+||-++
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~~~~~-----~~~~~----~l~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIRWKQK-----EFEPS----DIVDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEEEEec-----CCChh----hcCCceEEEEcC
Confidence            57899999999999999988888898 888885432 12222222222111111     11100    012689999998


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCcee
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA  304 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~  304 (353)
                      +.++ ++..+...... +.++.....+...++-
T Consensus        79 ~d~e-lN~~i~~~a~~-~~lvn~~d~~~~~~f~  109 (202)
T PRK06718         79 NDPR-VNEQVKEDLPE-NALFNVITDAESGNVV  109 (202)
T ss_pred             CCHH-HHHHHHHHHHh-CCcEEECCCCccCeEE
Confidence            8754 55555544454 6677775544434443

>PRK06484 short chain dehydrogenase; Validated

Probab=96.21  E-value=0.054  Score=54.26  Aligned_cols=79  Identities=18%  Similarity=0.339  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce---EeCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~---~~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+.++++.++++.+ ++++...   ..|..+ ..++.+.+.+..  .+++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence            5789999998 8899999999999999 999998888876654 4455432   123321 233333333322  24799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      +++++.|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK06398 aldose dehydrogenase; Validated

Probab=96.21  E-value=0.047  Score=49.32  Aligned_cols=74  Identities=20%  Similarity=0.267  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .|+++||+|+ +++|.+++..+...|+ +|+.+++++++..     .... ..|..+ ..++.+.+.+..  .+.+|+++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999998 8999999999999999 8988888765432     1111 123321 233333333332  23799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      ++.|.
T Consensus        78 ~~Ag~   82 (258)
T PRK06398         78 NNAGI   82 (258)
T ss_pred             ECCCC
Confidence            98874

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.19  E-value=0.085  Score=49.64  Aligned_cols=96  Identities=14%  Similarity=0.107  Sum_probs=66.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHH-HHCCCCeEEEEcCChhhHHHHHh-----CCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGA-KARGASRIIGVDTNPEKCEKAKA-----FGVTEFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la-~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      ....++++|+|+|..|...+..+ ...++++|.+.++++++.+.+.+     ++.. +..+    .++.+.++     ..
T Consensus       124 ~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~----~~~~~~~~-----~a  193 (325)
T PRK08618        124 REDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV----NSADEAIE-----EA  193 (325)
T ss_pred             CCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe----CCHHHHHh-----cC
Confidence            34568899999999998777554 45688899999999988765532     3432 2212    22333332     48


Q ss_pred             cEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      |+|+.|++....+- . ..++++ -++..+|....
T Consensus       194 DiVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~p  225 (325)
T PRK08618        194 DIIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFMP  225 (325)
T ss_pred             CEEEEccCCCCcch-H-HhcCCC-cEEEecCCCCc
Confidence            99999998754433 3 788996 88889998654

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.19  E-value=0.052  Score=48.61  Aligned_cols=79  Identities=25%  Similarity=0.356  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+    ++.+... .  .|..+ ..++.+.+....  .+
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            4679999997 8999999999888999 899998888766543    2233222 1  23321 223333333321  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|.+++.
T Consensus        81 ~~d~vi~~a~~   91 (258)
T PRK12429         81 GVDILVNNAGI   91 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.17  E-value=0.048  Score=48.32  Aligned_cols=96  Identities=18%  Similarity=0.207  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE--eCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      -+|.+||-+|+| .|+....+ ..+|+ +|+++|.+++..+.++......-  ++|.   ....+.+... ++.||+|+.
T Consensus        58 l~g~~vLDvGCG-gG~Lse~m-Ar~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~---~~~~edl~~~-~~~FDvV~c  130 (243)
T COG2227          58 LPGLRVLDVGCG-GGILSEPL-ARLGA-SVTGIDASEKPIEVAKLHALESGVNIDYR---QATVEDLASA-GGQFDVVTC  130 (243)
T ss_pred             CCCCeEEEecCC-ccHhhHHH-HHCCC-eeEEecCChHHHHHHHHhhhhccccccch---hhhHHHHHhc-CCCccEEEE
Confidence            488999999984 14444444 44588 99999999999999876543332  3343   2233333321 249999885


Q ss_pred             -----ccCCh-HHHHHHHHHhccCCceEEEEc
Q 018627          270 -----CIGDT-GMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       270 -----~~g~~-~~~~~~~~~l~~~~G~~v~~g  295 (353)
                           .+..+ ..+..+.++++|+ |.++..-
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST  161 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPG-GILFLST  161 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence                 44443 3567888999997 9887763

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.031  Score=50.13  Aligned_cols=74  Identities=18%  Similarity=0.166  Sum_probs=50.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-E--eCCCCCCccHHHHHHHHhcCCcc
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~--~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      ++++||+|+ |++|..+++.+...|+ +|+++.+++++.+.+++    .+..- +  .|..    +. +.+.....+++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~----~~-~~~~~~~~~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT----DA-IDRAQAAEWDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCC----CH-HHHHHHhcCCCC
Confidence            468999998 8999999999999999 89988888776654432    23221 1  1222    11 233333344899


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|.+.|.
T Consensus        76 ~vi~~ag~   83 (257)
T PRK09291         76 VLLNNAGI   83 (257)
T ss_pred             EEEECCCc
Confidence            99999873

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.15  E-value=0.042  Score=48.71  Aligned_cols=78  Identities=17%  Similarity=0.206  Sum_probs=51.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-HHHHHhCCCceE-eCCCCCCccHHHHHHHHhc--CCccEEE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTEF-LNPNDNNEPVQQVIKRITD--GGADYSF  268 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~--~~~dvv~  268 (353)
                      ++++||+|+ +++|..+++.+...|+ +|+++++++++ .+.+++.|+..+ .|..+ ..+..+.+.....  +++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence            468999998 8999999999989999 88888877643 344455554322 23221 2333333333322  3699999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      ++.|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            99874

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.14  E-value=0.11  Score=47.38  Aligned_cols=107  Identities=17%  Similarity=0.216  Sum_probs=73.4

Q ss_pred             HHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-E-eCCCCCCccHHHH
Q 018627          182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F-LNPNDNNEPVQQV  255 (353)
Q Consensus       182 ~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~-~~~~~~~~~~~~~  255 (353)
                      +..+.+..++++|++||=+|+| =|.+++.+|+..|+ +|++++.|+++.+.+++    .|... + +...+ -.+    
T Consensus        61 ~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d-~rd----  133 (283)
T COG2230          61 LDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD-YRD----  133 (283)
T ss_pred             HHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-ccc----
Confidence            3345688999999999999985 46777788888899 99999999998877644    56552 1 11111 011    


Q ss_pred             HHHHhcCCccEEEe-----ccCC---hHHHHHHHHHhccCCceEEEEcCCCCC
Q 018627          256 IKRITDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTLGVPKLK  300 (353)
Q Consensus       256 ~~~~~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~  300 (353)
                          ..+.||.|+.     .+|.   +..+..+.+.|+++ |++++-......
T Consensus       134 ----~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~  181 (283)
T COG2230         134 ----FEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD  181 (283)
T ss_pred             ----cccccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence                1235787764     3443   35677788899997 998876655443

>PRK06701 short chain dehydrogenase; Provisional

Probab=96.13  E-value=0.077  Score=48.94  Aligned_cols=80  Identities=20%  Similarity=0.206  Sum_probs=48.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-H----HHHHhCCCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-C----EKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-~----~~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      -.++++||+|+ |++|..++..+...|+ +|+.+.+++++ .    +.++..|... .+  |..+ ...+.+.+.+..  
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~  121 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVRE  121 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            35789999998 8999999999988999 88888766432 2    2223334322 12  2221 222323333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      .+++|++|.++|.
T Consensus       122 ~~~iD~lI~~Ag~  134 (290)
T PRK06701        122 LGRLDILVNNAAF  134 (290)
T ss_pred             cCCCCEEEECCcc
Confidence            1378999998874

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.034  Score=49.96  Aligned_cols=79  Identities=20%  Similarity=0.309  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ +++|..++..+...|+ +|+.+++++++.+.+    ++.+... .+  |..+ .....+.+.+..  -+
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence            4678999998 8999999999999999 899988888776544    2334322 22  3221 222223333322  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|+++.++|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.12  E-value=0.033  Score=49.75  Aligned_cols=79  Identities=23%  Similarity=0.342  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+    ++.+... .  .|..+ ...+.....+..  .+
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence            4688999998 9999999999988999 899998887655433    2222221 1  23221 222222222221  13


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|.++|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999999883

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.11  E-value=0.02  Score=52.48  Aligned_cols=98  Identities=17%  Similarity=0.206  Sum_probs=70.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC--
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG--  272 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g--  272 (353)
                      .+|.|+|+|.+|.-++.+|..+|+ +|...+.+.+|+..+..+-...+........++.+.++     +.|+++.++=  
T Consensus       169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~-----~aDlvIgaVLIp  242 (371)
T COG0686         169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVK-----KADLVIGAVLIP  242 (371)
T ss_pred             ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhh-----hccEEEEEEEec
Confidence            457788999999999999999999 99999999999999977433332222112445555554     4898888652  


Q ss_pred             C---h-HHHHHHHHHhccCCceEEEEcCCCC
Q 018627          273 D---T-GMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       273 ~---~-~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +   | -..++.++.|+|+ +.+|++....+
T Consensus       243 gakaPkLvt~e~vk~MkpG-sVivDVAiDqG  272 (371)
T COG0686         243 GAKAPKLVTREMVKQMKPG-SVIVDVAIDQG  272 (371)
T ss_pred             CCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence            1   1 2356778999997 99998875444

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.11  E-value=0.057  Score=49.76  Aligned_cols=44  Identities=25%  Similarity=0.342  Sum_probs=38.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK  235 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~  235 (353)
                      ..++++||+|+|+.+.+++..+..+|+++++++.|+.+|.+.+.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La  168 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA  168 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence            34789999999999999999888899989999999998877663

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.11  E-value=0.037  Score=49.79  Aligned_cols=79  Identities=18%  Similarity=0.257  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+ ..+..+.+....  .+++|++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            4689999998 8999999999999999 7766544 4444555544443322 23321 333333333322  2379999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      +.++|.
T Consensus        84 i~~ag~   89 (255)
T PRK06463         84 VNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            999874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=96.09  E-value=0.031  Score=50.25  Aligned_cols=79  Identities=22%  Similarity=0.341  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh--HHHHHhCCCce-E--eCCCCCCccHHHHHHHHh--cCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++..  .+.+++.+... .  .|..+ ..++.+.+.+..  -+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence            5789999998 8999999999999999 88888765422  23344455332 1  23331 333333333322  2479


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999999874

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.035  Score=50.82  Aligned_cols=79  Identities=25%  Similarity=0.293  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.+++..+...|+ +|+++++++++++.+    ++.|... .+  |..+ ..++.+.+.+..  .+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence            5789999997 8999999999999999 888888887765543    2234322 12  2221 223333333221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++|++.|.
T Consensus        83 ~id~li~nAg~   93 (275)
T PRK05876         83 HVDVVFSNAGI   93 (275)
T ss_pred             CCCEEEECCCc
Confidence            78999999873

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.08  E-value=0.037  Score=49.71  Aligned_cols=79  Identities=25%  Similarity=0.390  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+    ++.|... .+  |..+ ..++.+.+....  .+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence            5789999998 9999999999988999 899998888765433    2333222 12  3321 223333333321  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++|.++|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.08  E-value=0.078  Score=47.92  Aligned_cols=78  Identities=17%  Similarity=0.363  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hhHHHH-HhC-CCc-eE--eCCCCCCccHHHHHHHHhc
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKA-KAF-GVT-EF--LNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~---~~~~~~-~~~-G~~-~~--~~~~~~~~~~~~~~~~~~~  261 (353)
                      .|+++||+|+   +++|.++++.+...|+ +|+.+.+++   ++++.+ +++ +.. ..  .|..+ ..+..+.+.+...
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence            5789999986   4899999999999999 888876543   333333 333 211 11  23321 2333333333322


Q ss_pred             --CCccEEEeccC
Q 018627          262 --GGADYSFECIG  272 (353)
Q Consensus       262 --~~~dvv~d~~g  272 (353)
                        +++|++++++|
T Consensus        84 ~~g~ld~lv~nag   96 (257)
T PRK08594         84 EVGVIHGVAHCIA   96 (257)
T ss_pred             hCCCccEEEECcc
Confidence              47999999886

>PRK06179 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.02  Score=51.92  Aligned_cols=77  Identities=22%  Similarity=0.400  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .+++++|+|+ |++|..+++.+...|+ +|++++++.++.+...  +...+ .|..+ ..++.+.+....  .+.+|++|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li   78 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD-DASVQAAVDEVIARAGRIDVLV   78 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence            3568999998 8999999999988999 8999988876654321  22221 23321 333444444332  23789999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      ++.|.
T Consensus        79 ~~ag~   83 (270)
T PRK06179         79 NNAGV   83 (270)
T ss_pred             ECCCC
Confidence            99984

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.07  E-value=0.044  Score=52.77  Aligned_cols=97  Identities=23%  Similarity=0.305  Sum_probs=66.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHH-HHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.++++||+|+|-+|..++..+...|.+.|+..-|..+|... ++++|+.. +.+    .++.+.+.     .+|+||.+
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~l----~el~~~l~-----~~DvViss  245 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VAL----EELLEALA-----EADVVISS  245 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ecH----HHHHHhhh-----hCCEEEEe
Confidence            478899999999999999999999998899999999888764 47788443 222    22333333     49999999


Q ss_pred             cCChHHH---HHHHHHhccCCc-eEEEEcCCC
Q 018627          271 IGDTGMI---TTALQSCCDGWG-LAVTLGVPK  298 (353)
Q Consensus       271 ~g~~~~~---~~~~~~l~~~~G-~~v~~g~~~  298 (353)
                      ++.+..+   ......++.... -+++++.+.
T Consensus       246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         246 TSAPHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             cCCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            8875431   222234444312 466776653

>PRK07904 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.052  Score=48.99  Aligned_cols=81  Identities=20%  Similarity=0.347  Sum_probs=51.2

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhh-HHH----HHhCCCc--eEe--CCCCCCccHHHHHHHH
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEK-CEK----AKAFGVT--EFL--NPNDNNEPVQQVIKRI  259 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~-~~~----~~~~G~~--~~~--~~~~~~~~~~~~~~~~  259 (353)
                      +..+++|||+|+ |++|.++++-+...| + +|+++++++++ ++.    +++.+..  .++  |..+ ..+..+.+.+.
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~   82 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA   82 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence            456789999998 899999998877774 7 89888888765 332    3333421  222  3321 23333333333


Q ss_pred             hc-CCccEEEeccCC
Q 018627          260 TD-GGADYSFECIGD  273 (353)
Q Consensus       260 ~~-~~~dvv~d~~g~  273 (353)
                      .. +.+|+++.+.|.
T Consensus        83 ~~~g~id~li~~ag~   97 (253)
T PRK07904         83 FAGGDVDVAIVAFGL   97 (253)
T ss_pred             HhcCCCCEEEEeeec
Confidence            22 489999988765

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.041  Score=49.56  Aligned_cols=78  Identities=17%  Similarity=0.170  Sum_probs=51.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCC--c-eE--eCCCCCCccHHHHHHHHh--cCCc
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGV--T-EF--LNPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~--~-~~--~~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      ++++||+|+ |++|..++..+...|+ +|++++++.++++.+.+ +..  . ..  .|..+ ..++.+.+....  .+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence            468999997 8999999999998999 89999998887765533 221  1 11  23321 233333333322  2368


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+++.++|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999998873

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.04  E-value=0.17  Score=44.26  Aligned_cols=101  Identities=17%  Similarity=0.152  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-hHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .|++|||+|+|.+|..-++.+...|+ +|++++.... .+..+.+.|--..+.-.   .. ...+     .++++||-++
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~~~---~~-~~dl-----~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLARC---FD-ADIL-----EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEeCC---CC-HHHh-----CCcEEEEECC
Confidence            47899999999999999999999999 8888855432 33333344422222111   11 1111     3699999998


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCcee
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA  304 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~  304 (353)
                      +.+..-.......+.. |..|.+-......++.
T Consensus        78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~  109 (205)
T TIGR01470        78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFI  109 (205)
T ss_pred             CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEE
Confidence            8865545555666664 8888765544434443

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK06196 oxidoreductase; Provisional

Probab=96.03  E-value=0.043  Score=51.19  Aligned_cols=79  Identities=22%  Similarity=0.301  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceEe--CCCCCCccHHHHHHHHh--cCCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~dv  266 (353)
                      .+++|||+|+ |++|.+++..+...|+ +|++++++.++.+.+. ++.....+  |..+ ..++.+.+.+..  .+++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence            4689999998 8999999999988999 8999989887765442 22211222  3221 223333333322  247999


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      +|+++|.
T Consensus       103 li~nAg~  109 (315)
T PRK06196        103 LINNAGV  109 (315)
T ss_pred             EEECCCC
Confidence            9999873

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.02  E-value=0.045  Score=49.49  Aligned_cols=79  Identities=27%  Similarity=0.384  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C--CCc-eEe--CCCCCCccHHHHHHHHh-cCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GVT-EFL--NPNDNNEPVQQVIKRIT-DGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--G~~-~~~--~~~~~~~~~~~~~~~~~-~~~~  264 (353)
                      +++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ +  +.. ..+  |..+ ...+.+...... .+.+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i   81 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI   81 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence            4678999987 8999999999999999 89999998887665532 1  211 122  2221 122222222211 2478


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+++.++|.
T Consensus        82 d~lv~~ag~   90 (263)
T PRK09072         82 NVLINNAGV   90 (263)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.039  Score=49.51  Aligned_cols=79  Identities=19%  Similarity=0.248  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..++..+...|+ +|+++++++++.+.+.+    .+... .  .|.. +...+...+.+..  -+
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDIT-DEDQCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCC-CHHHHHHHHHHHHHHcC
Confidence            5788999998 8999999999999999 89999888876654422    23221 1  2222 1233333333321  13


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++|.+.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            68999998874

>PRK08703 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.054  Score=48.13  Aligned_cols=80  Identities=26%  Similarity=0.321  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce----EeCCCCC-CccH---HHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE----FLNPNDN-NEPV---QQVIKRI  259 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~----~~~~~~~-~~~~---~~~~~~~  259 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.    +.+...    ..|..+. ..++   .+.+...
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            4679999998 8999999999999999 8999999887765442    222111    1222110 1122   2233333


Q ss_pred             hcCCccEEEeccCC
Q 018627          260 TDGGADYSFECIGD  273 (353)
Q Consensus       260 ~~~~~dvv~d~~g~  273 (353)
                      ..+.+|++|.++|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            33578999999884

>PRK07985 oxidoreductase; Provisional

Probab=96.00  E-value=0.1  Score=48.29  Aligned_cols=103  Identities=16%  Similarity=0.159  Sum_probs=61.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++.++.  ++.+.+    ++.|... .  .|..+ ..++.+.+.+..  
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            5689999998 8999999999999999 888876542  233222    2334322 1  23321 223333333322  


Q ss_pred             cCCccEEEeccCCh--------------------------HHHHHHHHHhccCCceEEEEcCCC
Q 018627          261 DGGADYSFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       261 ~~~~dvv~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      -+++|+++.+.|..                          ..++.++..++.+ |++|.+++..
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~  188 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQ  188 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCch
Confidence            23789999987731                          1122333445665 8999987643

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.00  E-value=0.039  Score=49.59  Aligned_cols=79  Identities=20%  Similarity=0.301  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+    ++.+.... +  |..+ ...+.+.+....  .+
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            4789999998 9999999999999999 888888888655433    33454322 1  2221 222222222221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++.++|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999999874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.99  E-value=0.016  Score=56.94  Aligned_cols=95  Identities=14%  Similarity=0.154  Sum_probs=63.5

Q ss_pred             HhccCCCCCEEE----EEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHh
Q 018627          187 NVADISKGSTVV----IFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       187 ~~~~~~~g~~vL----V~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~  260 (353)
                      ...++++|+++|    |+|+ |++|.+++|+++..|+ .|+++.+.+.+....+..+... +++..  ...+.+.+....
T Consensus        27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~l~~~~  103 (450)
T PRK08261         27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDAT--GITDPADLKALY  103 (450)
T ss_pred             cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECC--CCCCHHHHHHHH
Confidence            456778899988    8876 9999999999999999 8998866666444333344442 33332  222233333221


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                                    ......++.+.++ |+++.++....
T Consensus       104 --------------~~~~~~l~~l~~~-griv~i~s~~~  127 (450)
T PRK08261        104 --------------EFFHPVLRSLAPC-GRVVVLGRPPE  127 (450)
T ss_pred             --------------HHHHHHHHhccCC-CEEEEEccccc
Confidence                          3456677888886 99999987544

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.99  E-value=0.052  Score=47.96  Aligned_cols=74  Identities=18%  Similarity=0.247  Sum_probs=49.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      ++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ ..++.+.+... .+.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~-~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLF-PHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHH-hhcCcEEEECCC
Confidence            5899987 8999999999988999 898898988877655 34444332 23321 22333333322 236899999865

>CHL00194 ycf39 Ycf39; Provisional

Probab=95.99  E-value=0.085  Score=49.30  Aligned_cols=95  Identities=12%  Similarity=0.148  Sum_probs=60.0

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      +|||+|+ |.+|..+++.+...|. +|+++.++.++...+...++..+. |..  +.   +.+..... ++|+||++++.
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~--d~---~~l~~al~-g~d~Vi~~~~~   74 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLS--LP---ETLPPSFK-GVTAIIDASTS   74 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCC--CH---HHHHHHHC-CCCEEEECCCC
Confidence            6999998 8999999999999998 899888887766655555654332 222  11   12222222 58999998753


Q ss_pred             hH------------HHHHHHHHhccC-CceEEEEcCC
Q 018627          274 TG------------MITTALQSCCDG-WGLAVTLGVP  297 (353)
Q Consensus       274 ~~------------~~~~~~~~l~~~-~G~~v~~g~~  297 (353)
                      ..            .....++.++.. -.++|.++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            11            112333444443 1378887764

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.057  Score=48.00  Aligned_cols=80  Identities=19%  Similarity=0.209  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-Ee--CCCCCCccHHHHHHHHhc--
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~--~~~~~~~~~~~~~~~~~~--  261 (353)
                      ..++++||+|+ |.+|..++..+...|. +|+++++++++.+.+.+    .+... .+  |..+ ..++...+.....  
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   81 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQF   81 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            34678999997 8999999999999999 89999998876654422    23221 22  2221 2233333333221  


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|+++.++|.
T Consensus        82 ~~id~lv~~ag~   93 (241)
T PRK07454         82 GCPDVLINNAGM   93 (241)
T ss_pred             CCCCEEEECCCc
Confidence            369999999874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.97  E-value=0.045  Score=48.52  Aligned_cols=79  Identities=25%  Similarity=0.382  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHhc--C
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRITD--G  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~~--~  262 (353)
                      ++++|||+|+ |.+|..++..+...|. +|+++.+++++.+.+    ++.+....   .|..+ ...+.+.+.+...  +
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            4578999998 9999999999988999 799999988765433    33443322   23321 2233333333221  3


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|.++.++|.
T Consensus        82 ~id~vi~~ag~   92 (246)
T PRK05653         82 ALDILVNNAGI   92 (246)
T ss_pred             CCCEEEECCCc
Confidence            68999999864

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.045  Score=49.65  Aligned_cols=78  Identities=23%  Similarity=0.273  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      +++++||+|+ |++|..+++.+...|+ +|+++++++++.+..    .+.+... .  .|..+ ..++...+.+..  .+
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 899998887765433    2233221 1  23321 223333333332  23


Q ss_pred             CccEEEeccC
Q 018627          263 GADYSFECIG  272 (353)
Q Consensus       263 ~~dvv~d~~g  272 (353)
                      ++|++|.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            7899998876

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.96  E-value=0.022  Score=47.47  Aligned_cols=79  Identities=24%  Similarity=0.309  Sum_probs=50.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC--hhhHHHH----HhCCCceE-eCCCC-CCccHHHHHHHHh--cCC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN--PEKCEKA----KAFGVTEF-LNPND-NNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~--~~~~~~~----~~~G~~~~-~~~~~-~~~~~~~~~~~~~--~~~  263 (353)
                      +++||+|+ +++|..+++.+...|.++|+.+.++  .++.+.+    +..+.... +..+. +..++...+.+..  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            47899998 8999999999988877688999888  4444433    44453222 21111 1233333444332  348


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.|.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            9999999886

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.044  Score=49.36  Aligned_cols=79  Identities=20%  Similarity=0.276  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C-----CCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F-----GVTE-FL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~-----G~~~-~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ +     +... .+  |..+ ..++...+....  
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            4789999998 8999999999999999 89999888876654422 1     2111 12  3221 223333333322  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      .+.+|+++.++|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence            2479999999884

>PRK07062 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.041  Score=49.77  Aligned_cols=79  Identities=22%  Similarity=0.289  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCceE----eCCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTEF----LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~~----~~~~~~~~~~~~~~~~~~--  260 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+     .+...+    .|..+ ..+..+.+.+..  
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence            4789999998 8999999999999999 89999898876654321     221121    23321 222333333222  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+.+|++++++|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999984

>PRK07402 precorrin-6B methylase; Provisional

Probab=95.96  E-value=0.15  Score=44.15  Aligned_cols=105  Identities=15%  Similarity=0.190  Sum_probs=62.1

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      ....++.++++||=.|+| .|..++.+++.....+|++++.+++..+.+++    ++...+....   .+..+.+.... 
T Consensus        33 ~~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~~-  107 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQLA-  107 (196)
T ss_pred             HHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhCC-
Confidence            345577889999888864 34445555655432399999999988777643    5554321111   12222222221 


Q ss_pred             CCccE-EEeccCC-hHHHHHHHHHhccCCceEEEEcC
Q 018627          262 GGADY-SFECIGD-TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       262 ~~~dv-v~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ..+|. +++.... ...++.+.+.|+++ |+++....
T Consensus       108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence            23444 4443222 35678888899997 99888754

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.96  E-value=0.11  Score=45.37  Aligned_cols=90  Identities=27%  Similarity=0.333  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++|+|+|.|.+|..+++.+...|+ +|++++++.++.+.+++ +|+. .++..        .+   .....|+++-|
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~--------~l---~~~~~Dv~vp~   92 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPE--------EI---YSVDADVFAPC   92 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcch--------hh---ccccCCEEEec
Confidence            367899999999999999999999999 89999999888776654 4643 22221        11   11258898877


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ......-...++.++.  ..++.-++
T Consensus        93 A~~~~I~~~~~~~l~~--~~v~~~AN  116 (200)
T cd01075          93 ALGGVINDDTIPQLKA--KAIAGAAN  116 (200)
T ss_pred             ccccccCHHHHHHcCC--CEEEECCc
Confidence            6543444555566653  34444433

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.043  Score=49.17  Aligned_cols=79  Identities=20%  Similarity=0.373  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+    ++.+... .  .|..+ ..++.+.+....  .+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence            4789999998 8999999998888999 899998987765433    3334322 2  22221 222323222221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PRK06194 hypothetical protein; Provisional

Probab=95.95  E-value=0.038  Score=50.62  Aligned_cols=79  Identities=23%  Similarity=0.318  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..++..+...|+ +|++++++.++.+..    +..+..- .+  |..+ ..++.+.+....  .+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG   82 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            3678999997 8999999999999999 899998887655433    2223322 12  2221 223333333221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        83 ~id~vi~~Ag~   93 (287)
T PRK06194         83 AVHLLFNNAGV   93 (287)
T ss_pred             CCCEEEECCCC
Confidence            78999999885

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.95  E-value=0.041  Score=49.35  Aligned_cols=78  Identities=26%  Similarity=0.300  Sum_probs=51.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCc-eEe--CCCCCCccHHHHHHHHh--cCC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-EFL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~-~~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      |+++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.    +.+.. ..+  |.. +...+.+.+.+..  -+.
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR-NPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-CHHHHHHHHHHHHHHhCC
Confidence            578999988 8899999999999999 8999988887665442    22322 122  322 1233333333321  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|+++++.|.
T Consensus        79 id~lI~~ag~   88 (252)
T PRK07677         79 IDALINNAAG   88 (252)
T ss_pred             ccEEEECCCC
Confidence            8999999873

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.94  E-value=0.046  Score=49.92  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=50.3

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChhhHH---HH-HhCCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCE---KA-KAFGVTEFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~~~~---~~-~~~G~~~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++.+||+|+ +  ++|.++++.+...|+ +|+.++++++..+   .+ ++.|....+  |..+ ..+..+.+.+..  -
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence            5789999998 4  899999999999999 8888877653322   22 334543222  3321 222333333322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|++++++|.
T Consensus        84 g~iD~lVnnAG~   95 (271)
T PRK06505         84 GKLDFVVHAIGF   95 (271)
T ss_pred             CCCCEEEECCcc
Confidence            479999999873

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.94  E-value=0.16  Score=46.27  Aligned_cols=105  Identities=16%  Similarity=0.184  Sum_probs=61.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------hHHH----HHhCCCc-eEeCCCCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------KCEK----AKAFGVT-EFLNPNDN  248 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-------------------~~~~----~~~~G~~-~~~~~~~~  248 (353)
                      .+.+|+|+|+|++|..++..+...|.++++.+|.+.-                   |.+.    ++++... .+..+.  
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~--  106 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD--  106 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe--
Confidence            5678999999999999999999999889999976531                   1111    1222211 111111  


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +.-..+.+..+....+|+|+||+.....-....+.+....-.++.+|...+
T Consensus       107 ~~i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag~  157 (268)
T PRK15116        107 DFITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGG  157 (268)
T ss_pred             cccChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCccc
Confidence            000012222333347999999998744433344444443145676766544

>PLN00203 glutamyl-tRNA reductase

Probab=95.92  E-value=0.071  Score=53.26  Aligned_cols=99  Identities=17%  Similarity=0.329  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .+.+|+|+|+|.+|.++++.+...|+++|+++.++.++.+.+.+ ++...+....  ..+..+.+     ...|+||.|+
T Consensus       265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~--~~dl~~al-----~~aDVVIsAT  337 (519)
T PLN00203        265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKP--LDEMLACA-----AEADVVFTST  337 (519)
T ss_pred             CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeec--HhhHHHHH-----hcCCEEEEcc
Confidence            37899999999999999999999998789999999888776644 5321111100  11222222     2589999998


Q ss_pred             CChHH--HHHHHHHhccC---Cc---eEEEEcCCC
Q 018627          272 GDTGM--ITTALQSCCDG---WG---LAVTLGVPK  298 (353)
Q Consensus       272 g~~~~--~~~~~~~l~~~---~G---~~v~~g~~~  298 (353)
                      +.+..  ....++.+.+.   .+   .+++++.+.
T Consensus       338 ~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPR  372 (519)
T PLN00203        338 SSETPLFLKEHVEALPPASDTVGGKRLFVDISVPR  372 (519)
T ss_pred             CCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence            76432  34444444321   02   477777653

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.91  E-value=0.048  Score=52.54  Aligned_cols=93  Identities=23%  Similarity=0.304  Sum_probs=58.1

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHh--CCCce-EeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          197 VVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKA--FGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       197 vLV~Gag~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~--~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      |+|+|+|.+|..+++.+....-. +|++.+++.++++.+.+  .+... .+..+  ..+.. .+.++.. +.|+|++|+|
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d--~~~~~-~l~~~~~-~~dvVin~~g   76 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVD--VNDPE-SLAELLR-GCDVVINCAG   76 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE----TTTHH-HHHHHHT-TSSEEEE-SS
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEe--cCCHH-HHHHHHh-cCCEEEECCc
Confidence            68999999999999999888643 89999999999887754  22211 11111  12222 2444433 4699999998


Q ss_pred             ChHHHHHHHHHhccCCceEEEE
Q 018627          273 DTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ......-+-.++..+ -++++.
T Consensus        77 p~~~~~v~~~~i~~g-~~yvD~   97 (386)
T PF03435_consen   77 PFFGEPVARACIEAG-VHYVDT   97 (386)
T ss_dssp             GGGHHHHHHHHHHHT--EEEES
T ss_pred             cchhHHHHHHHHHhC-CCeecc
Confidence            754444555667765 778883

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.91  E-value=0.15  Score=42.84  Aligned_cols=88  Identities=20%  Similarity=0.356  Sum_probs=56.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      .+|-++|.|.+|..+++-+...|+ +|++.+++.++.+.+.+.|+...       .+..+.+..     .|+||-|+...
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~~~-----~dvvi~~v~~~   68 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAAEQ-----ADVVILCVPDD   68 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHHHH-----BSEEEE-SSSH
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHhhc-----ccceEeecccc
Confidence            468889999999999999999999 99999999999999888774432       122333332     57777777765


Q ss_pred             HHHHHHHH------HhccCCceEEEEcC
Q 018627          275 GMITTALQ------SCCDGWGLAVTLGV  296 (353)
Q Consensus       275 ~~~~~~~~------~l~~~~G~~v~~g~  296 (353)
                      ...+..+.      .+.++ ..+++++.
T Consensus        69 ~~v~~v~~~~~i~~~l~~g-~iiid~sT   95 (163)
T PF03446_consen   69 DAVEAVLFGENILAGLRPG-KIIIDMST   95 (163)
T ss_dssp             HHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred             hhhhhhhhhhHHhhccccc-eEEEecCC
Confidence            44444333      23443 45555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.14  Score=45.45  Aligned_cols=103  Identities=16%  Similarity=0.210  Sum_probs=60.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhHH----HHHhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~~----~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      +++++||+|+ |++|..+++.+...|+ +++.+.++. +..+    .+++.+... .+  |..+ ..++.+.+.+..  .
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            5689999997 9999999999999999 676665543 2222    223334321 22  2221 223333333221  2


Q ss_pred             CCccEEEeccCChH-------------------------HHHHHHHHhccCCceEEEEcCCC
Q 018627          262 GGADYSFECIGDTG-------------------------MITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       262 ~~~dvv~d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +++|++|.++|...                         .+..+++.+... |+++.++...
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~  142 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTSV  142 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeecc
Confidence            47999999987410                         122334455665 8999887643

>PRK14967 putative methyltransferase; Provisional

Probab=95.89  E-value=0.13  Score=45.58  Aligned_cols=99  Identities=17%  Similarity=0.152  Sum_probs=64.2

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcCC
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      ...+.++++||-.|+|. |..+..+++. +..+|++++.+++.++.+++    .+....+..    .++.+.+   ..+.
T Consensus        31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~----~d~~~~~---~~~~  101 (223)
T PRK14967         31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR----GDWARAV---EFRP  101 (223)
T ss_pred             hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE----Cchhhhc---cCCC
Confidence            34577889999999875 7777777765 55599999999988776543    343222211    2222211   2348


Q ss_pred             ccEEEeccCC---------------------------hHHHHHHHHHhccCCceEEEEcC
Q 018627          264 ADYSFECIGD---------------------------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       264 ~dvv~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ||+|+.+.+-                           ...+..+.+.|+++ |+++.+-.
T Consensus       102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~~  160 (223)
T PRK14967        102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQS  160 (223)
T ss_pred             eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            9999975320                           11345677899997 99997643

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.89  E-value=0.072  Score=47.53  Aligned_cols=36  Identities=25%  Similarity=0.438  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ...+|+|+|.|++|..++..+...|..+++.+|.+.
T Consensus        10 ~~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755          10 RNAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            347899999999999999999999999999997654

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.05  Score=49.10  Aligned_cols=78  Identities=22%  Similarity=0.338  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHhc--CC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD--GG  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~~--~~  263 (353)
                      +.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+    +..+... ++  |..+ ...+...+.+...  ++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence            357999998 9999999999999999 899998887665433    2334322 11  2221 2233333333221  36


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.++|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.89  E-value=0.052  Score=49.59  Aligned_cols=80  Identities=23%  Similarity=0.339  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh----HHHHHhCC-Cce-EeCCCCCCccHHHHHHHHhc--C
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK----CEKAKAFG-VTE-FLNPNDNNEPVQQVIKRITD--G  262 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~----~~~~~~~G-~~~-~~~~~~~~~~~~~~~~~~~~--~  262 (353)
                      -.|+.|||+|+ +++|.+.++=...+|+ +++..|.+++.    .+..++.| +.. ..|..+ .++.....++.-.  |
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVG  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence            36899999987 7899988888888899 88888777653    34445555 222 233332 3444443333322  3


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++++++|-
T Consensus       114 ~V~ILVNNAGI  124 (300)
T KOG1201|consen  114 DVDILVNNAGI  124 (300)
T ss_pred             CceEEEecccc
Confidence            88999999884

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.89  E-value=0.067  Score=41.27  Aligned_cols=94  Identities=19%  Similarity=0.257  Sum_probs=60.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|||+|+|.+|..-++.+...|+ +|+++....   +..+  +-.....     ..+.+.     -.++++||-+.+
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~~-----l~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEED-----LDGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GGG-----CTTESEEEE-SS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHHH-----HhhheEEEecCC
Confidence            57899999999999999999999999 898886664   2122  2122221     112101     126999999988


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCce
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEV  303 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~  303 (353)
                      .+..-+...+..+.. |.++.+...+...++
T Consensus        70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF   99 (103)
T PF13241_consen   70 DPELNEAIYADARAR-GILVNVVDDPELCDF   99 (103)
T ss_dssp             -HHHHHHHHHHHHHT-TSEEEETT-CCCCSE
T ss_pred             CHHHHHHHHHHHhhC-CEEEEECCCcCCCeE
Confidence            866555556667765 999998776554443

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.052  Score=49.44  Aligned_cols=77  Identities=26%  Similarity=0.342  Sum_probs=51.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCc-eE--eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EF--LNPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~-~~--~~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      +++||+|+ |.+|..+++.+...|. +|+++.+++++.+.+++ .+.. .+  .|..+ ...+.+.+.+..  .+++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            57999997 9999999999888999 89999899887776644 2221 11  22221 222333333321  2378999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      |.++|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            999874

>PRK05717 oxidoreductase; Validated

Probab=95.85  E-value=0.051  Score=48.87  Aligned_cols=79  Identities=23%  Similarity=0.322  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-E--eCCCCCCccHHHHHHHHhc--CCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~--~~~~~~~~~~~~~~~~~~~--~~~d  265 (353)
                      .|+++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+ ++++... .  .|..+ ..++.+.+.+...  +.+|
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id   86 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD   86 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence            4789999997 8999999999998999 888888877655443 3444321 1  23321 2223233333222  3689


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|.+.|.
T Consensus        87 ~li~~ag~   94 (255)
T PRK05717         87 ALVCNAAI   94 (255)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.84  E-value=0.058  Score=50.39  Aligned_cols=79  Identities=22%  Similarity=0.238  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----h-CC-Cc-eE--eCCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----A-FG-VT-EF--LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~-~G-~~-~~--~~~~~~~~~~~~~~~~~~--  260 (353)
                      .|++++|+|+ +++|.+++..+...|+ +|+.+.+++++.+.+.    + .+ .. .+  .|..+ ..+..+.+.+..  
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence            4789999998 8999999999989999 8988889887655332    1 11 11 11  23321 222222222221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      .+.+|++|+++|.
T Consensus        91 ~~~iD~li~nAG~  103 (313)
T PRK05854         91 GRPIHLLINNAGV  103 (313)
T ss_pred             CCCccEEEECCcc
Confidence            2379999998874

>PRK09242 tropinone reductase; Provisional

Probab=95.83  E-value=0.051  Score=48.88  Aligned_cols=79  Identities=19%  Similarity=0.256  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----C--CCce-E--eCCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVTE-F--LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~--G~~~-~--~~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ |++|..++..+...|+ +|++++++.++.+.+.+    .  +... .  .|..+ ..++...+.+..  
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            4789999998 8999999999999999 89999888877654422    1  2221 1  23321 223333333321  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|+++.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999984

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.82  E-value=0.071  Score=48.16  Aligned_cols=79  Identities=20%  Similarity=0.307  Sum_probs=49.6

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHCCCCeEEEEcCChhhH---HHH-HhCCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKC---EKA-KAFGVTEFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Gag---~vG~~a~~la~~~g~~~vi~~~~~~~~~---~~~-~~~G~~~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|++   ++|.++++.+...|+ +|+.++++++..   +.+ ++++....+  |.. +..+..+.+....  .
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVR-EPGQLEAVFARIAEEW   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcC-CHHHHHHHHHHHHHHc
Confidence            57899999873   799999999999999 888887875432   222 334432222  222 1223333333322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|++++++|.
T Consensus        87 g~ld~lv~nAg~   98 (258)
T PRK07533         87 GRLDFLLHSIAF   98 (258)
T ss_pred             CCCCEEEEcCcc
Confidence            479999999873

>PLN02366 spermidine synthase

Probab=95.82  E-value=0.075  Score=49.54  Aligned_cols=101  Identities=17%  Similarity=0.167  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CC------ceEeCCCCCCccHHHHHHHHhcCC
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GV------TEFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~------~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      ....++||++|+|. |..+..+++.-+..+|++++.+++-.+.++++ ..      +.-+...  ..+..+.+++..++.
T Consensus        89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi--~~Da~~~l~~~~~~~  165 (308)
T PLN02366         89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH--IGDGVEFLKNAPEGT  165 (308)
T ss_pred             CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE--EChHHHHHhhccCCC
Confidence            35578999998754 55666777776666899999999888888773 21      1000000  123333444333448


Q ss_pred             ccEEEeccCC----------hHHHHHHHHHhccCCceEEEEc
Q 018627          264 ADYSFECIGD----------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       264 ~dvv~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ||+||--...          .+.++.+.+.|+++ |.++.-.
T Consensus       166 yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        166 YDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             CCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            9988864332          24577888999997 9997643

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.80  E-value=0.056  Score=48.69  Aligned_cols=79  Identities=23%  Similarity=0.414  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E--eCCCCCCccHHHHHHHHhc--C
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRITD--G  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~--~~~~~~~~~~~~~~~~~~~--~  262 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.    +.+... .  .|..+ ...+.+.+.+...  +
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            5789999997 9999999999999999 8999989887765443    223221 2  23321 2233332332221  3


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++.++|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.057  Score=48.54  Aligned_cols=79  Identities=16%  Similarity=0.268  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh-hHH----HHHhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~-~~~----~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ +++|.++++.+...|+ +|++++++++ ..+    .+++.+... .+  |..+ ..++.+.+.+..  .
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4789999987 8999999999999999 8888877643 222    233334322 22  2221 223333333321  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|+++.+.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            478999999884

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.78  E-value=0.068  Score=47.94  Aligned_cols=79  Identities=28%  Similarity=0.371  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+    +..+... .+  |..+ ..++.+.+....  .+
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence            5788999998 8999999999999999 899998887765433    2223222 22  2221 223333333221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.77  E-value=0.09  Score=45.91  Aligned_cols=35  Identities=31%  Similarity=0.411  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      ...+|+|+|+|++|..+++.+...|.++++.+|.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            56789999999999999999999999999999877

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08589 short chain dehydrogenase; Validated

Probab=95.77  E-value=0.051  Score=49.51  Aligned_cols=79  Identities=23%  Similarity=0.301  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH---hCCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK---AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~---~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .++++||+|+ +++|.++++.+...|+ +|++++++++..+.++   +.+... .  .|..+ ..+....+....  .+.
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence            5789999998 8999999999988999 8998888843322232   233221 1  23321 223333333322  247


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            8999999874

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.051  Score=48.53  Aligned_cols=79  Identities=22%  Similarity=0.292  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C--CCc-eEe--CCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GVT-EFL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~--G~~-~~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .++++||+|+ |.+|..+++.+...|+ +|+++.++.++.+...+ +  +.. ..+  |.. +.....+.+.+..  .++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVG-SAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCC-CHHHHHHHHHHHHHHcCC
Confidence            4679999998 8999999998888898 89999888776544322 2  322 122  222 1223333333221  137


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|+++.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999999884

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.75  E-value=0.064  Score=48.29  Aligned_cols=79  Identities=20%  Similarity=0.303  Sum_probs=50.4

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--E--eCCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--F--LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Gag---~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~--~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .|+++||+|++   ++|.++++.+...|+ +|+.+.++++..+.++++....  .  .|..+ ..+..+.+....  -+.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence            57899999874   899999999999999 8888888754444444432211  1  22221 223333333322  247


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus        84 iD~lv~nAg~   93 (252)
T PRK06079         84 IDGIVHAIAY   93 (252)
T ss_pred             CCEEEEcccc
Confidence            9999998873

>PLN02253 xanthoxin dehydrogenase

Probab=95.75  E-value=0.051  Score=49.61  Aligned_cols=79  Identities=18%  Similarity=0.220  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC--c-eE--eCCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-EF--LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~--~-~~--~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++.  . ..  .|..+ ...+.+.+....  -++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence            4789999987 8999999998888999 899888877655433 33321  1 11  23321 223333333221  147


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.1  Score=47.06  Aligned_cols=77  Identities=23%  Similarity=0.317  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCc-eEe--CCCCCCccHHHHHHHHhcCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVT-EFL--NPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~-~~~--~~~~~~~~~~~~~~~~~~~~  263 (353)
                      .++++||+|+ +++|..+++.+...|+ +|+++++++++.+.+.+     .+.. ..+  |..+ ..++.+.+..  -+.
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~--~g~   81 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAE--AGD   81 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHH--hCC
Confidence            4789999998 8999999999999999 99999888876654322     2322 122  2221 2222222222  147


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.+.|.
T Consensus        82 id~lv~~ag~   91 (259)
T PRK06125         82 IDILVNNAGA   91 (259)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK08643 acetoin reductase; Validated

Probab=95.74  E-value=0.056  Score=48.53  Aligned_cols=78  Identities=18%  Similarity=0.267  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      ++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.    +.+... .  .|..+ ...+.+.+.+..  .++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            578999998 8999999999999999 8999988877654432    223222 1  13221 222333333321  247


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|+++.++|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.74  E-value=0.042  Score=50.41  Aligned_cols=45  Identities=31%  Similarity=0.426  Sum_probs=40.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      ..|+++||+|+|+.+.+++.-+...|+++|+++.|+.+|.+.+.+
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            358999999999999999999999998899999999999777754

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.73  E-value=0.076  Score=48.77  Aligned_cols=79  Identities=20%  Similarity=0.271  Sum_probs=57.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-----hCCCce---EeCCCCCCccHHHHHHHHhcC-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-----AFGVTE---FLNPNDNNEPVQQVIKRITDG-  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-----~~G~~~---~~~~~~~~~~~~~~~~~~~~~-  262 (353)
                      -|++.+|+|+ .++|.+-+.=+...|. +|+.+.|+++|++..+     +.++.-   ++|+.+.+. ..+.+++...+ 
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~~~  125 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLAGL  125 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhcCC
Confidence            4788999998 7899876665555899 8999999999988663     345322   356654333 45667766666 


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+-+.++|+|-
T Consensus       126 ~VgILVNNvG~  136 (312)
T KOG1014|consen  126 DVGILVNNVGM  136 (312)
T ss_pred             ceEEEEecccc
Confidence            88899999985

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=95.72  E-value=0.11  Score=46.55  Aligned_cols=103  Identities=18%  Similarity=0.196  Sum_probs=67.1

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh--
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~--  260 (353)
                      ..+..+.++||-+|.| .|..++.+++.++ ..+|+.++.+++..+.+++    .|...-+...  ..+..+.+.++.  
T Consensus        63 l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~--~gda~~~L~~l~~~  139 (234)
T PLN02781         63 LVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFI--QSDALSALDQLLNN  139 (234)
T ss_pred             HHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHHhC
Confidence            4566778899998864 5676777777653 3499999999988877744    4644322111  233444444442  


Q ss_pred             --cCCccEEEeccCC---hHHHHHHHHHhccCCceEEEE
Q 018627          261 --DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       261 --~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~  294 (353)
                        .+.||+||--...   ...++.+++.++++ |.++.-
T Consensus       140 ~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d  177 (234)
T PLN02781        140 DPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD  177 (234)
T ss_pred             CCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence              2489988865432   34577788999997 887753

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.053  Score=48.77  Aligned_cols=80  Identities=24%  Similarity=0.333  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHH----HHHhCCCceE---eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTEF---LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~----~~~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .+++++|+|+ |++|..+++.+...|++.|++++++.++.+    .+++.+....   .|..+ ...+.+.+....  -+
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            5788999998 899999999999999944999988876554    2333443321   23321 222333332221  13


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.061  Score=48.18  Aligned_cols=79  Identities=18%  Similarity=0.294  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+.++++.++.+.+.+    .+... .+  +..+ ..+..+.+.+..  -+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   84 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG   84 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            4678999997 8999999999999999 89999888776554422    33221 22  2221 223333333322  13


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|+++.+.|.
T Consensus        85 ~id~li~~ag~   95 (252)
T PRK07035         85 RLDILVNNAAA   95 (252)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.69  E-value=0.05  Score=48.82  Aligned_cols=77  Identities=18%  Similarity=0.253  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+.+++++++.  .....+.. ..|..+ ..++.+.+....  -+.+|++|
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999998 8999999999999999 899998877651  11111111 123221 223333333321  23789999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      .++|.
T Consensus        81 ~~ag~   85 (252)
T PRK07856         81 NNAGG   85 (252)
T ss_pred             ECCCC
Confidence            99873

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.69  E-value=0.067  Score=48.09  Aligned_cols=79  Identities=20%  Similarity=0.301  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh--hHHHHHhCCCce-E--eCCCCCCccHHHHHHHHh--cCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      .|+++||+|+ |++|.++++.+...|+ +|+.+++++.  ..+.+++.+... .  .|.. +..+..+.+.+..  .+.+
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLR-KIDGIPALLERAVAEFGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCC-CHHHHHHHHHHHHHHhCCC
Confidence            4789999998 8999999999999999 8888765432  223344444322 1  2222 1223333333321  2379


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++++++|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.68  E-value=0.13  Score=45.90  Aligned_cols=74  Identities=27%  Similarity=0.325  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~dv  266 (353)
                      .++++||+|+ |.+|..++..+...|+ +|++++++.     .+..+... .+  |..+ ...+.+.+.+..  .+++|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            4689999998 8899999999988999 888887775     22222211 11  2221 223333333322  236899


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      ++.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9999874

>PRK06720 hypothetical protein; Provisional

Probab=95.67  E-value=0.083  Score=44.74  Aligned_cols=80  Identities=21%  Similarity=0.248  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-EeCCCC-CCccHHHHHHHH--hcCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FLNPND-NNEPVQQVIKRI--TDGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~~~~~-~~~~~~~~~~~~--~~~~  263 (353)
                      .++.++|+|+ +++|..++..+...|+ +|++++++++..+..    ++.+... .+..+- +..++.+.+.+.  .-++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5788999997 7899999998888898 899998887655332    2334332 222211 112233322221  1247


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus        94 iDilVnnAG~  103 (169)
T PRK06720         94 IDMLFQNAGL  103 (169)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.15  Score=46.51  Aligned_cols=77  Identities=22%  Similarity=0.316  Sum_probs=48.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh-cCCcc
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT-DGGAD  265 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~-~~~~d  265 (353)
                      ++.+||+|+|++|.+++..+. .|+ +|+.+++++++.+.+    ++.|... .  .|..+ ..++.+.+.... .+++|
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT   78 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence            357888898899999998885 798 899998887765433    2234322 2  23321 233333333221 24799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        79 ~li~nAG~   86 (275)
T PRK06940         79 GLVHTAGV   86 (275)
T ss_pred             EEEECCCc
Confidence            99999984

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.66  E-value=0.071  Score=48.50  Aligned_cols=78  Identities=27%  Similarity=0.412  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCC--Cc-eEe--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFG--VT-EFL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G--~~-~~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ |.+|..+++.+...|+ +|+++.+++++.+...    +.+  .. .++  |..+ ..++...+.+..  
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            4689999998 8999999999999999 8999988876654332    221  11 122  3221 223333333322  


Q ss_pred             cCCccEEEeccC
Q 018627          261 DGGADYSFECIG  272 (353)
Q Consensus       261 ~~~~dvv~d~~g  272 (353)
                      .+++|++|.++|
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence            237899999987

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.65  E-value=0.046  Score=47.47  Aligned_cols=98  Identities=16%  Similarity=0.234  Sum_probs=59.8

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      +.....++.+||-.|+| .|..+..+++. |. +|++++.+++-++.+++    .+...+. ..  ..++.+.  . .++
T Consensus        24 ~~l~~~~~~~vLDiGcG-~G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~-~~--~~d~~~~--~-~~~   94 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCG-NGRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLH-TA--VVDLNNL--T-FDG   94 (197)
T ss_pred             HhcccCCCCcEEEECCC-CCHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcce-EE--ecChhhC--C-cCC
Confidence            34455677899999886 36667777764 77 99999999987666543    2322111 10  1111110  1 134


Q ss_pred             CccEEEeccCC--------hHHHHHHHHHhccCCceEEEE
Q 018627          263 GADYSFECIGD--------TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       263 ~~dvv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .||+|+.+..-        ...+....+.|+++ |.++.+
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~  133 (197)
T PRK11207         95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV  133 (197)
T ss_pred             CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            79999975431        24466677789997 996544

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.65  E-value=0.06  Score=53.33  Aligned_cols=77  Identities=23%  Similarity=0.375  Sum_probs=54.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh---------------------hhHHHHHhCCCceEeCCCCCCcc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP---------------------EKCEKAKAFGVTEFLNPNDNNEP  251 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~---------------------~~~~~~~~~G~~~~~~~~~~~~~  251 (353)
                      .+++|+|+|+|+.|+.++..++..|. .|++.+..+                     ...+.++++|++..++... ..+
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~  217 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD  217 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence            68899999999999999999999999 788887653                     2456778899876655431 111


Q ss_pred             HHHHHHHHhcCCccEEEeccCCh
Q 018627          252 VQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       252 ~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +  .+.... ..+|.||.++|..
T Consensus       218 ~--~~~~~~-~~~D~vilAtGa~  237 (467)
T TIGR01318       218 I--SLDDLL-EDYDAVFLGVGTY  237 (467)
T ss_pred             c--CHHHHH-hcCCEEEEEeCCC
Confidence            1  111111 2699999999974

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.65  E-value=0.072  Score=47.89  Aligned_cols=79  Identities=22%  Similarity=0.386  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+ ++... .+  |.. +.....+.+.+..  .+.+|
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~~id   82 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVT-RQDSIDRIVAAAVERFGGID   82 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCC-CHHHHHHHHHHHHHHcCCCC
Confidence            4678999998 8999999999999999 89999998887665533 33211 12  222 1223333333321  23789


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      +++.+.|.
T Consensus        83 ~li~~ag~   90 (257)
T PRK07067         83 ILFNNAAL   90 (257)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.65  E-value=0.066  Score=50.12  Aligned_cols=78  Identities=24%  Similarity=0.319  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC---c-eE--eCCCCCCccHHHHHHHH--hcC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV---T-EF--LNPNDNNEPVQQVIKRI--TDG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~---~-~~--~~~~~~~~~~~~~~~~~--~~~  262 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +++..   . ..  .|..+ .....+.+.+.  ..+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence            5788999998 8999999999988998 899998888776544 22321   1 11  23321 22222223222  123


Q ss_pred             CccEEEeccC
Q 018627          263 GADYSFECIG  272 (353)
Q Consensus       263 ~~dvv~d~~g  272 (353)
                      ++|++|+++|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6999999987

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.076  Score=47.38  Aligned_cols=77  Identities=23%  Similarity=0.342  Sum_probs=50.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----C--CCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~--G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      ++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+    .  +..- ++  |..+ ...+.+.+.+..  -
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            568999998 8999999998888898 89888888877654422    1  2111 22  3321 223333333322  2


Q ss_pred             CCccEEEeccC
Q 018627          262 GGADYSFECIG  272 (353)
Q Consensus       262 ~~~dvv~d~~g  272 (353)
                      +++|++|.++|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            37999999987

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.068  Score=48.18  Aligned_cols=79  Identities=28%  Similarity=0.325  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh---CCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .++++||+|+ |++|..++..+...|+ +|+.++++++..+..++   .+... .  .|..+ ..++...+.+..  .+.
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            4689999997 8999999999999999 89999888754433322   23221 1  22221 222333333221  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (263)
T PRK08226         83 IDILVNNAGV   92 (263)
T ss_pred             CCEEEECCCc
Confidence            8999998883

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.61  E-value=0.077  Score=47.84  Aligned_cols=76  Identities=26%  Similarity=0.388  Sum_probs=49.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEe--CCCCCCccHHHHHHHHh--cCCccE
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~dv  266 (353)
                      ++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+    ++.+....+  |..+ .+++.+.+.+..  .+++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence            6899997 8999999999999999 899998988765543    222322222  2221 233333333322  247999


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      ++++.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9999874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.61  E-value=0.076  Score=47.65  Aligned_cols=79  Identities=25%  Similarity=0.386  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |.+|..++..+...|+ +|+.+++++++.+.+    ++.+... .+  |..+ ..++...+....  -+
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence            5889999998 8999999998888999 899999987765443    2334222 22  3321 223333333322  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++.++|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            78999998884

>PRK00811 spermidine synthase; Provisional

Probab=95.60  E-value=0.08  Score=48.81  Aligned_cols=99  Identities=14%  Similarity=0.142  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-C-----C--ceEeCCCCCCccHHHHHHHHhcCC
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-G-----V--TEFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G-----~--~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      ...++||++|+|. |..+..+++..+.++|++++.+++-.+.++++ .     .  +.-+...  ..+..+.++. ..+.
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~--~~Da~~~l~~-~~~~  150 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV--IGDGIKFVAE-TENS  150 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE--ECchHHHHhh-CCCc
Confidence            4568999998753 66666777776777999999999998888763 1     1  1101000  1223333433 3458


Q ss_pred             ccEEEeccCC----------hHHHHHHHHHhccCCceEEEEc
Q 018627          264 ADYSFECIGD----------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       264 ~dvv~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +|+|+-....          .+.++...+.|+++ |.++.-.
T Consensus       151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            9988864321          23456777899997 9988753

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.60  E-value=0.086  Score=48.75  Aligned_cols=37  Identities=19%  Similarity=0.320  Sum_probs=32.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ..++++||+|+|+.|.+++..+...|+++|+++.++.
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            3578999999999999999988899997799998885

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.084  Score=47.39  Aligned_cols=78  Identities=18%  Similarity=0.302  Sum_probs=50.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC---Cce-EeCCCCCCccHHHHHHHHh--cCCcc
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG---VTE-FLNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G---~~~-~~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      ++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+.+ +.   +.. ..|..+ ...+...+.+..  .+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            468999998 8999999998888898 89999888877654432 21   111 122221 222222333221  13699


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.28  Score=43.91  Aligned_cols=104  Identities=18%  Similarity=0.192  Sum_probs=60.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHHH----HhCCCce-E--eCCCCCCccHH---HHHHHH-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQ---QVIKRI-  259 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~---~~~~~~-  259 (353)
                      .++++||+|+ +++|.++++.+...|+ +|++.. +++++.+.+    ++.+... .  .|..+ ..+..   +.+.+. 
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   80 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES-LHGVEALYSSLDNEL   80 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC-HHHHHHHHHHHHHHh
Confidence            4789999997 8999999999999999 777653 444443322    2223221 1  12221 11222   222221 


Q ss_pred             ---hc-CCccEEEeccCCh----------H---------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          260 ---TD-GGADYSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       260 ---~~-~~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                         .+ +++|++++++|..          +               ..+.++..+.+. |++|.+++...
T Consensus        81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~~  148 (252)
T PRK12747         81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAAT  148 (252)
T ss_pred             hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCccc
Confidence               12 2799999998731          0               112344556675 99999987544

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.58  E-value=0.085  Score=49.17  Aligned_cols=96  Identities=10%  Similarity=0.047  Sum_probs=66.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHH-hCCCc--eEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAK-AFGVT--EFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~-~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      .....+++|+|+|..|.+.+..+.. .+.++|.+.+++.++.+.+. ++...  .+. .    .++.+.++     ..|+
T Consensus       122 ~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~----~~~~~av~-----~aDi  191 (304)
T PRK07340        122 PAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P----LDGEAIPE-----AVDL  191 (304)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E----CCHHHHhh-----cCCE
Confidence            3466889999999999998888864 67778999999998876553 33211  111 1    22333333     5999


Q ss_pred             EEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          267 SFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       267 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      |+.|++++..+-..+  ++++ -++..+|....
T Consensus       192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p  221 (304)
T PRK07340        192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFTP  221 (304)
T ss_pred             EEEccCCCCceeCcc--CCCC-CEEEecCCCCC
Confidence            999998765544443  7886 88999997655

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.58  E-value=0.22  Score=41.55  Aligned_cols=90  Identities=19%  Similarity=0.251  Sum_probs=56.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|.+|||+|+|.+|..-++.+...|+ .|++++  ++..+.+++++..... ..    .+.    +..-.++|+||-+++
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~-~~----~~~----~~dl~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWK-QK----TFS----NDDIKDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEE-ec----ccC----hhcCCCceEEEECCC
Confidence            67899999999999999988888899 888773  4444444555432221 11    111    000126899999988


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcC
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ..+ .+..+....+. +.++..-.
T Consensus        80 d~e-~N~~i~~~a~~-~~~vn~~d  101 (157)
T PRK06719         80 QHA-VNMMVKQAAHD-FQWVNVVS  101 (157)
T ss_pred             CHH-HHHHHHHHHHH-CCcEEECC
Confidence            744 55665555554 44555433

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.57  E-value=0.079  Score=49.16  Aligned_cols=79  Identities=22%  Similarity=0.268  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----Hh-C-CCc-eE--eCCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KA-F-GVT-EF--LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~-~-G~~-~~--~~~~~~~~~~~~~~~~~~--  260 (353)
                      .+++|||+|+ |++|..+++.+...|+ +|+++.++.++.+.+    .+ . +.. ..  .|..+ ..+..+.+.+..  
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence            5789999998 8999999998888899 888888887765432    11 1 111 12  23321 223333333322  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++|.++|.
T Consensus        93 ~~~iD~li~nAg~  105 (306)
T PRK06197         93 YPRIDLLINNAGV  105 (306)
T ss_pred             CCCCCEEEECCcc
Confidence            2379999999873

>PRK07574 formate dehydrogenase; Provisional

Probab=95.57  E-value=0.13  Score=49.47  Aligned_cols=45  Identities=29%  Similarity=0.382  Sum_probs=36.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      .|++|.|+|.|.+|+.+++.++..|. +|++.++.....+..+.+|
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g  235 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG  235 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence            57899999999999999999999999 9999988753333333444

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.096  Score=48.18  Aligned_cols=80  Identities=23%  Similarity=0.254  Sum_probs=49.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh---------hhHHH----HHhCCCce-E--eCCCCCCccHHH
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCEK----AKAFGVTE-F--LNPNDNNEPVQQ  254 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~---------~~~~~----~~~~G~~~-~--~~~~~~~~~~~~  254 (353)
                      -.++++||+|+ +++|.++++.+...|+ +|++++++.         ++.+.    +++.|... .  .|..+ ..+..+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence            46789999987 8999999999988999 788776654         33322    22334322 1  12221 223333


Q ss_pred             HHHHHh--cCCccEEEeccCC
Q 018627          255 VIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       255 ~~~~~~--~~~~dvv~d~~g~  273 (353)
                      .+....  -+.+|++++++|.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            333322  2479999999874

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.56  E-value=0.23  Score=44.25  Aligned_cols=104  Identities=18%  Similarity=0.157  Sum_probs=60.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhH----HHHHhCCCce-E--eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKC----EKAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~----~~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |.+|..++.-+...|+ +++.+.+ +.++.    ..+++.+... .  .|..+ ..++...+....  -
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   82 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRY   82 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHc
Confidence            3678999998 8899999998888999 6665543 32322    2233444332 1  23321 222322333221  1


Q ss_pred             CCccEEEeccCCh----------H---------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          262 GGADYSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       262 ~~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +.+|++|.+.|..          .               ..+.+.+.++.. |+++.+++...
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~~  144 (252)
T PRK06077         83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVAG  144 (252)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchhc
Confidence            3789999999730          0               122334455675 89999987543

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.55  E-value=0.068  Score=55.10  Aligned_cols=75  Identities=24%  Similarity=0.346  Sum_probs=55.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh---------------------hHHHHHhCCCceEeCCCC-CCc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPND-NNE  250 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~G~~~~~~~~~-~~~  250 (353)
                      .+++|+|+|+|+.|+.++..++..|+ .|++.++.+.                     ..+.++++|++..++... .+.
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 7888876653                     456778889876665432 111


Q ss_pred             cHHHHHHHHhcCCccEEEeccCC
Q 018627          251 PVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      .+.+ +.    ..+|.||.++|.
T Consensus       388 ~~~~-l~----~~~DaV~latGa  405 (639)
T PRK12809        388 TFSD-LT----SEYDAVFIGVGT  405 (639)
T ss_pred             CHHH-HH----hcCCEEEEeCCC
Confidence            2221 11    269999999986

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.089  Score=47.33  Aligned_cols=75  Identities=19%  Similarity=0.317  Sum_probs=46.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++ +..+... .+....+..+  -.+. +.+.+.. +.+|++|++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D--~~~~-~~~~~~~-~~iDilVnn   86 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWE--CGKE-ESLDKQL-ASLDVLILN   86 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEee--CCCH-HHHHHhc-CCCCEEEEC
Confidence            4689999998 8999999999999999 888887776 2222211 1111222111  1111 1222222 369999999


Q ss_pred             cCC
Q 018627          271 IGD  273 (353)
Q Consensus       271 ~g~  273 (353)
                      +|.
T Consensus        87 AG~   89 (245)
T PRK12367         87 HGI   89 (245)
T ss_pred             Ccc
Confidence            874

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=95.55  E-value=0.15  Score=45.92  Aligned_cols=100  Identities=12%  Similarity=0.126  Sum_probs=59.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC--CCceE-eCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF--GVTEF-LNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~--G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      .+++|||+|+ |.+|..++..+...|. +|++..++.++.......  ++..+ .|..  +.  .+.+.+....++|+||
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~--d~--~~~l~~~~~~~~d~vi   90 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVT--EG--SDKLVEAIGDDSDAVI   90 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCC--CC--HHHHHHHhhcCCCEEE
Confidence            4689999998 8999999998888898 898888887765443221  22221 2332  11  1222222222699999


Q ss_pred             eccCChH-------------HHHHHHHHhccC-CceEEEEcCC
Q 018627          269 ECIGDTG-------------MITTALQSCCDG-WGLAVTLGVP  297 (353)
Q Consensus       269 d~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~  297 (353)
                      .+.|...             .....++.+... .+++|.++..
T Consensus        91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            8876421             122334444432 2688887764

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.11  Score=46.17  Aligned_cols=76  Identities=17%  Similarity=0.241  Sum_probs=48.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce--Ee--CCCCCCccHHHHHHHHhcCCcc
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FL--NPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~--~~--~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      ++++|+|+ |++|..+++.+...|+ +|+++++++++.+.+.+    .+...  ++  |..+ ..+..+.+.+. ...+|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~-~~~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSL-PALPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHH-hhcCC
Confidence            57999997 9999999999999999 89999998877654321    11112  22  2221 22233333322 22579


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      +++.++|.
T Consensus        79 ~vv~~ag~   86 (243)
T PRK07102         79 IVLIAVGT   86 (243)
T ss_pred             EEEECCcC
Confidence            99988764

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.53  E-value=0.074  Score=47.33  Aligned_cols=79  Identities=20%  Similarity=0.236  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHH----HHhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .+++|||+|+ |.+|..++..+...|+ +|++++++.++...    +++.+... ++  |..+ ...+.+.+.+..  -+
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            4678999997 8999999998888899 89999888655433    23333221 22  2221 222333332222  13


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++|.+.+.
T Consensus        83 ~~d~vi~~ag~   93 (251)
T PRK12826         83 RLDILVANAGI   93 (251)
T ss_pred             CCCEEEECCCC
Confidence            68999998864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.53  E-value=0.076  Score=48.40  Aligned_cols=78  Identities=32%  Similarity=0.382  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.+++..+...|+ +|+++++++++.+.+    ++.+... .  .|..+ ..++...+....  -+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            4788999997 8999999999999999 899998887665433    2233321 1  22221 222333333222  24


Q ss_pred             CccEEEeccC
Q 018627          263 GADYSFECIG  272 (353)
Q Consensus       263 ~~dvv~d~~g  272 (353)
                      ++|++|.++|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999987

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.51  E-value=0.18  Score=47.19  Aligned_cols=95  Identities=16%  Similarity=0.116  Sum_probs=61.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHH-HCCCCeEEEEcCChhhHHHHHh-C---CCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKA-F---GVTEFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~-~~g~~~vi~~~~~~~~~~~~~~-~---G~~~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      ....++++|+|+|..|...+..+. ..+.++|.+..++.++.+.+.+ +   |.. +...    .+..+.++     ..|
T Consensus       122 ~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~----~~~~~av~-----~aD  191 (314)
T PRK06141        122 RKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV----TDLEAAVR-----QAD  191 (314)
T ss_pred             CCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe----CCHHHHHh-----cCC
Confidence            356789999999999999886444 3677799999999888766533 3   321 1111    12333332     589


Q ss_pred             EEEeccCChHH-HHHHHHHhccCCceEEEEcCCC
Q 018627          266 YSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       266 vv~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|+.+++.+.. +..  +.++++ -++..+|...
T Consensus       192 IVi~aT~s~~pvl~~--~~l~~g-~~i~~ig~~~  222 (314)
T PRK06141        192 IISCATLSTEPLVRG--EWLKPG-THLDLVGNFT  222 (314)
T ss_pred             EEEEeeCCCCCEecH--HHcCCC-CEEEeeCCCC
Confidence            99988876433 222  567885 6666777543

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.51  E-value=0.13  Score=45.02  Aligned_cols=75  Identities=13%  Similarity=0.121  Sum_probs=47.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcC--CccEEEe
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDG--GADYSFE  269 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~--~~dvv~d  269 (353)
                      .+++||+|+ |.+|..++..+... . +|++++++.++.+.+.+ .....++..+  -.+ .+.+.+...+  ++|.+|.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D--~~~-~~~~~~~~~~~~~id~vi~   77 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVD--LTD-PEAIAAAVEQLGRLDVLVH   77 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecC--CCC-HHHHHHHHHhcCCCCEEEE
Confidence            367999998 89999998877776 6 89999998877665543 2112222221  111 1233333222  6999999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      ++|.
T Consensus        78 ~ag~   81 (227)
T PRK08219         78 NAGV   81 (227)
T ss_pred             CCCc
Confidence            9874

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.47  E-value=0.1  Score=46.93  Aligned_cols=78  Identities=22%  Similarity=0.299  Sum_probs=49.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----h-CCCce--Ee--CCCCCCccHHHHHHHHh--c
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----A-FGVTE--FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~-~G~~~--~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      ++++||+|+ |.+|..++..+...|+ +|+.++++.++.+.+.    + .+...  .+  |..+ ..+....+.+..  .
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            568999998 8999999999999999 8999988876554332    1 22111  22  2221 222333333321  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|+++++.|.
T Consensus        80 ~~id~vv~~ag~   91 (259)
T PRK12384         80 GRVDLLVYNAGI   91 (259)
T ss_pred             CCCCEEEECCCc
Confidence            478999999873

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.46  E-value=0.066  Score=48.98  Aligned_cols=80  Identities=18%  Similarity=0.216  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc---e---EeCCCCCCccHH---HHHH
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---E---FLNPNDNNEPVQ---QVIK  257 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~---~---~~~~~~~~~~~~---~~~~  257 (353)
                      -.|+.+||+|+ .++|.+.+..+...|+ +|+.+++++++.+..++    .+..   .   ..|..+ +++..   +...
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~~   83 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFAV   83 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHHH
Confidence            46889999987 8899999999999999 99999999888665432    2322   1   122221 22222   2222


Q ss_pred             HHhcCCccEEEeccCC
Q 018627          258 RITDGGADYSFECIGD  273 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g~  273 (353)
                      +...+++|+.+++.|.
T Consensus        84 ~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGA   99 (270)
T ss_pred             HHhCCCCCEEEEcCCc
Confidence            3345689999998875

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.087  Score=49.06  Aligned_cols=34  Identities=21%  Similarity=0.312  Sum_probs=30.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~   41 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS   41 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence            5789999998 8999999999999999 88888776

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.43  E-value=0.093  Score=47.48  Aligned_cols=78  Identities=18%  Similarity=0.307  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChh---hHHHH-HhCCCceE--eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~-~~~G~~~~--~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+.+||+|+ +  ++|.++++.+...|+ +|+..+++++   ..+.+ ++.|....  .|..+ ..+..+.+....  .
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence            5788999987 4  799999988888999 8888877642   22222 23353332  23331 233333333332  2


Q ss_pred             CCccEEEeccC
Q 018627          262 GGADYSFECIG  272 (353)
Q Consensus       262 ~~~dvv~d~~g  272 (353)
                      +.+|++++++|
T Consensus        85 g~iDilVnnag   95 (260)
T PRK06603         85 GSFDFLLHGMA   95 (260)
T ss_pred             CCccEEEEccc
Confidence            47999999887

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.15  Score=45.26  Aligned_cols=78  Identities=15%  Similarity=0.187  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHH---hc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRI---TD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~---~~  261 (353)
                      .|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+    ++.+... .+  |..+ .+++.+.+.+.   .+
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            4789999998 7899999999999999 899998988876543    2334332 12  2221 22333233322   22


Q ss_pred             CCccEEEeccC
Q 018627          262 GGADYSFECIG  272 (353)
Q Consensus       262 ~~~dvv~d~~g  272 (353)
                      +.+|++|.+.|
T Consensus        82 ~~iD~li~nag   92 (227)
T PRK08862         82 RAPDVLVNNWT   92 (227)
T ss_pred             CCCCEEEECCc
Confidence            27999999986

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.42  E-value=0.12  Score=48.81  Aligned_cols=37  Identities=35%  Similarity=0.524  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK  230 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~  230 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++.+.
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~  185 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP  185 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence            57899999999999999999999999 89999876543

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.42  E-value=0.099  Score=46.38  Aligned_cols=79  Identities=24%  Similarity=0.273  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCce-E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      +++++||+|+ |.+|..++..+...|+ .|+..+++.++++.+. .++... +  .|..+ ...+.+.+.+..  -+++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4679999998 8999999999988998 8888888877766543 334221 2  22221 222332222221  13799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.42  E-value=0.093  Score=47.23  Aligned_cols=78  Identities=21%  Similarity=0.267  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHH----HHhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~----~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ +++|.+.++.+...|+ +|+++.++ ++.+.    +.+.+... .  .|..+ .......+.+..  .+
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g   90 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFG   90 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 88888776 33222    23334321 2  23221 222333333322  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|+++.+.|.
T Consensus        91 ~id~li~~ag~  101 (258)
T PRK06935         91 KIDILVNNAGT  101 (258)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PRK08264 short chain dehydrogenase; Validated

Probab=95.42  E-value=0.073  Score=47.15  Aligned_cols=75  Identities=21%  Similarity=0.328  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc-eEe--CCCCCCccHHHHHHHHhcCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFL--NPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~-~~~--~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      .++++||+|+ |.+|..+++.+...|+++|++++++.++.+.   .+.. ..+  |..+ ...+.+.+..  -+.+|++|
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~vi   78 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEA--ASDVTILV   78 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHh--cCCCCEEE
Confidence            5678999987 9999999999999998678888888776543   2221 122  2221 1222222222  12689999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      .++|.
T Consensus        79 ~~ag~   83 (238)
T PRK08264         79 NNAGI   83 (238)
T ss_pred             ECCCc
Confidence            99876

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.39  E-value=0.22  Score=44.25  Aligned_cols=106  Identities=18%  Similarity=0.196  Sum_probs=62.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-------------------hHHHHHh----CCCceEeCCCCCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------KCEKAKA----FGVTEFLNPNDNN  249 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-------------------~~~~~~~----~G~~~~~~~~~~~  249 (353)
                      +.++|+|.|.|++|.+++..+.+.|+.++..+|-+.=                   |.+.+++    ....--+... .+
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~-~~  107 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAI-ND  107 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeeh-Hh
Confidence            4678999999999999999999999999988865441                   1111111    1110001111 01


Q ss_pred             ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      .-..+.+.++...+||+|+||.-.-..--.++..+.+..-.++..+..++
T Consensus       108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~  157 (263)
T COG1179         108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG  157 (263)
T ss_pred             hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence            11223444555568999999987633333444434443256777766554

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.076  Score=46.85  Aligned_cols=74  Identities=19%  Similarity=0.255  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHhcC-CccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDG-GADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~-~~dvv~d  269 (353)
                      .++++||+|+ |++|..+++.+...|. +|+++.++.++     ...... ..|..+ ...+.+.+.+.... ++|+++.
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~   74 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD-IEQTAATLAQINEIHPVDAIVN   74 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEE
Confidence            3678999998 8999999999999998 89988887654     111111 123321 23333344433333 6899999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      +.|.
T Consensus        75 ~ag~   78 (234)
T PRK07577         75 NVGI   78 (234)
T ss_pred             CCCC
Confidence            8874

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.38  E-value=0.11  Score=47.26  Aligned_cols=77  Identities=19%  Similarity=0.302  Sum_probs=50.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc---eE--eCCCCCCccHHHHHHHHh--c
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EF--LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~---~~--~~~~~~~~~~~~~~~~~~--~  261 (353)
                      ++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+.+    .+..   .+  .|..+ ..++.+ +.+..  -
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence            568999998 8999999999988999 89998888776554422    2221   12  23321 233333 43322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            378999999874

>PLN03139 formate dehydrogenase; Provisional

Probab=95.36  E-value=0.17  Score=48.62  Aligned_cols=46  Identities=26%  Similarity=0.255  Sum_probs=36.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV  239 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~  239 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++....+..++.|+
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~  243 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA  243 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence            57899999999999999999999999 89999877544444444443

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.14  Score=45.58  Aligned_cols=75  Identities=13%  Similarity=0.163  Sum_probs=48.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC-ceE--eCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TEF--LNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~-~~~--~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      +++||+|+ |++|..++..+...|+ +|+++++++++++.+.+.+. ...  .|..+ ..++.+.+.+. ....|.++.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~-~~~~d~~i~~   78 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQL-PFIPELWIFN   78 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhc-ccCCCEEEEc
Confidence            57899998 9999999988888999 89999999888777655331 111  23321 23333333332 2246777766


Q ss_pred             cC
Q 018627          271 IG  272 (353)
Q Consensus       271 ~g  272 (353)
                      +|
T Consensus        79 ag   80 (240)
T PRK06101         79 AG   80 (240)
T ss_pred             Cc
Confidence            65

>PLN02476 O-methyltransferase

Probab=95.34  E-value=0.19  Score=46.10  Aligned_cols=103  Identities=17%  Similarity=0.211  Sum_probs=67.9

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHh-
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~-  260 (353)
                      ...+..+.++||=+|.+ +|..++.+|+.++ -.+|+.++.+++..+.+    ++.|..+-+...  ..+..+.+.++. 
T Consensus       112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li--~GdA~e~L~~l~~  188 (278)
T PLN02476        112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVK--HGLAAESLKSMIQ  188 (278)
T ss_pred             HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHh
Confidence            34566778999999863 5777777787763 22799999999988777    446765423222  234445554432 


Q ss_pred             ---cCCccEEEeccCC---hHHHHHHHHHhccCCceEEE
Q 018627          261 ---DGGADYSFECIGD---TGMITTALQSCCDGWGLAVT  293 (353)
Q Consensus       261 ---~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~  293 (353)
                         .+.||.||--...   ...++.++++++++ |.++.
T Consensus       189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~  226 (278)
T PLN02476        189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVM  226 (278)
T ss_pred             cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEE
Confidence               2479988765543   34577888899996 88764

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.30  E-value=0.16  Score=46.39  Aligned_cols=95  Identities=15%  Similarity=0.167  Sum_probs=60.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhC---CCceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---GVTEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~---G~~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      ...+++++|+|+|++|.+++..+...|+ +|+++.+++++.+.+ +++   +.......       .+    .....+|+
T Consensus       114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-------~~----~~~~~~Di  181 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSM-------DE----LPLHRVDL  181 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEech-------hh----hcccCccE
Confidence            3457899999999999999998888898 899998988776554 333   22112111       11    11125899


Q ss_pred             EEeccCChHH--H---HHHHHHhccCCceEEEEcCCC
Q 018627          267 SFECIGDTGM--I---TTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       267 v~d~~g~~~~--~---~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      |++|++....  .   ......++++ ..++++...+
T Consensus       182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y~p  217 (270)
T TIGR00507       182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVYNP  217 (270)
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEeccCC
Confidence            9999875210  1   0113456775 6777775543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.30  E-value=0.1  Score=47.23  Aligned_cols=79  Identities=16%  Similarity=0.297  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+   +++|.+.++.+...|+ +|+.+.++++..+.++    +.|....+  |.. +.++..+.+....  .
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVA-SDDEINQVFADLGKHW   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCC-CHHHHHHHHHHHHHHh
Confidence            5789999984   4899999999999999 8887766543333332    23432222  322 1233333333322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            479999999874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.28  E-value=0.098  Score=46.72  Aligned_cols=78  Identities=23%  Similarity=0.349  Sum_probs=50.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      ++++||+|+ |.+|..++..+...|+ +|++++++.++.+.+.+    .+... .  .|..+ ..++...+....  .++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence            357999998 8999999999988999 89999898877655533    23221 1  23321 223333333321  236


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.+.+.
T Consensus        79 ~d~vi~~a~~   88 (255)
T TIGR01963        79 LDILVNNAGI   88 (255)
T ss_pred             CCEEEECCCC
Confidence            8999988864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.28  E-value=0.58  Score=35.12  Aligned_cols=85  Identities=24%  Similarity=0.413  Sum_probs=55.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC---CCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          196 TVVIFGLGTVGLSVAQGAKARG---ASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g---~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      +|.|+|+|.+|.+++.-+...|   . +|+ ++++++++.+.+ +++++....      .+..+.+.+     .|+||-|
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~~-----advvila   68 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQE-----ADVVILA   68 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHHH-----TSEEEE-
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhcc-----CCEEEEE
Confidence            4678899999999999998888   6 777 548999988877 556643221      234445543     8999999


Q ss_pred             cCChHHHHHHHHH---hccCCceEEEE
Q 018627          271 IGDTGMITTALQS---CCDGWGLAVTL  294 (353)
Q Consensus       271 ~g~~~~~~~~~~~---l~~~~G~~v~~  294 (353)
                      +.. ..+...+..   ..++ ..++.+
T Consensus        69 v~p-~~~~~v~~~i~~~~~~-~~vis~   93 (96)
T PF03807_consen   69 VKP-QQLPEVLSEIPHLLKG-KLVISI   93 (96)
T ss_dssp             S-G-GGHHHHHHHHHHHHTT-SEEEEE
T ss_pred             ECH-HHHHHHHHHHhhccCC-CEEEEe
Confidence            976 344444443   3443 445544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.26  E-value=0.18  Score=46.48  Aligned_cols=77  Identities=17%  Similarity=0.259  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCCh-HHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag~-vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++|+|+|.|. +|..++.++...|+ +|+.+.+..+                     ++.+.+     ..+|+++++
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~L~~~~-----~~aDIvI~A  209 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------NLPELV-----KQADIIVGA  209 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------hHHHHh-----ccCCEEEEc
Confidence            4789999999976 99999999999999 8888854211                     111222     258999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|.+..+..  +.++++ -.++.+|...
T Consensus       210 tG~~~~v~~--~~lk~g-avViDvg~n~  234 (283)
T PRK14192        210 VGKPELIKK--DWIKQG-AVVVDAGFHP  234 (283)
T ss_pred             cCCCCcCCH--HHcCCC-CEEEEEEEee
Confidence            987664443  568886 8888888654

>PRK01581 speE spermidine synthase; Validated

Probab=95.25  E-value=0.32  Score=46.18  Aligned_cols=100  Identities=14%  Similarity=0.072  Sum_probs=65.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC-----------ceEeCCCCCCccHHHHHHHH
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-----------TEFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~-----------~~~~~~~~~~~~~~~~~~~~  259 (353)
                      ....++|||+|+| .|.++..+++..+..+|++++.+++-.+.++++..           ..+-..   ..+..+.++. 
T Consensus       148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv---i~Da~~fL~~-  222 (374)
T PRK01581        148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH---VCDAKEFLSS-  222 (374)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE---ECcHHHHHHh-
Confidence            3455799999875 56677777777666699999999999999886311           111100   1233344443 


Q ss_pred             hcCCccEEEeccCC-----------hHHHHHHHHHhccCCceEEEEcC
Q 018627          260 TDGGADYSFECIGD-----------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       260 ~~~~~dvv~d~~g~-----------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ..+.||+||--...           .+.+..+.+.|+++ |.++.-..
T Consensus       223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~  269 (374)
T PRK01581        223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN  269 (374)
T ss_pred             cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            34489988865432           23567778899997 99877643

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.25  E-value=0.11  Score=46.16  Aligned_cols=80  Identities=21%  Similarity=0.332  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-EeCCCC-CCccHHHHHHHHhc--CC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FLNPND-NNEPVQQVIKRITD--GG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~~~~~-~~~~~~~~~~~~~~--~~  263 (353)
                      .+.++||+|+ |++|..++..+...|+ +|++++++.++.+.+    +..+... .+..+. +...+.+.+++...  ++
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999997 8999999998888999 899998887765433    2233221 121111 12233333333221  37


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.+.|.
T Consensus        85 id~vi~~ag~   94 (239)
T PRK07666         85 IDILINNAGI   94 (239)
T ss_pred             ccEEEEcCcc
Confidence            8999998874

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.21  E-value=0.13  Score=45.80  Aligned_cols=78  Identities=23%  Similarity=0.308  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      +++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.    +.+... ++  |.. +...+.+.+....  .+
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDIT-DRDSVDTAVAAAEQALG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCC-CHHHHHHHHHHHHHHcC
Confidence            4688999998 8999999999999999 8999988887655442    223222 22  222 1222333333322  23


Q ss_pred             CccEEEeccC
Q 018627          263 GADYSFECIG  272 (353)
Q Consensus       263 ~~dvv~d~~g  272 (353)
                      ++|++|.+.|
T Consensus        80 ~~d~vi~~ag   89 (250)
T TIGR03206        80 PVDVLVNNAG   89 (250)
T ss_pred             CCCEEEECCC
Confidence            7899999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.20  E-value=0.091  Score=45.53  Aligned_cols=98  Identities=13%  Similarity=0.172  Sum_probs=58.2

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      .+.....++.+||-.|+| .|..+..+++ .|. +|+++|.+++-++.+++    .+..  +...  ..++.. . . ..
T Consensus        23 ~~~~~~~~~~~vLDiGcG-~G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~--~~d~~~-~-~-~~   92 (195)
T TIGR00477        23 REAVKTVAPCKTLDLGCG-QGRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTD--AYDINA-A-A-LN   92 (195)
T ss_pred             HHHhccCCCCcEEEeCCC-CCHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeE--eccchh-c-c-cc
Confidence            344455566789999875 4566666665 477 99999999987766543    2322  1110  011110 0 1 12


Q ss_pred             CCccEEEeccC-----C---hHHHHHHHHHhccCCceEEEE
Q 018627          262 GGADYSFECIG-----D---TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       262 ~~~dvv~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      +.+|+|+.+.-     .   ...+....+.|+++ |.++.+
T Consensus        93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~  132 (195)
T TIGR00477        93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIV  132 (195)
T ss_pred             CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEE
Confidence            47999986422     1   24566777889997 985554

Part of a tellurite-reducing operon tehA and tehB

>PRK12743 oxidoreductase; Provisional

Probab=95.19  E-value=0.12  Score=46.54  Aligned_cols=78  Identities=17%  Similarity=0.191  Sum_probs=47.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHH----HHhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEK----AKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~----~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      ++++||+|+ +++|..+++.+...|+ +|+.+. ++.++.+.    +++.|... .  .|..+ ..++...+.+..  -+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            568999998 8999999999999999 776664 44444332    33445432 2  23321 222222222221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.18  E-value=0.12  Score=46.39  Aligned_cols=79  Identities=16%  Similarity=0.253  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .+++|||+|+ +++|..++..+...|+ +++.+++++++.+.+    ++.+... .  .|..+ ..+..+.+....  .+
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~   87 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG   87 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            4789999998 8999999999999999 888888877765443    2334322 2  23321 223333333322  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++.+.|.
T Consensus        88 ~~d~li~~ag~   98 (255)
T PRK06113         88 KVDILVNNAGG   98 (255)
T ss_pred             CCCEEEECCCC
Confidence            78999999873

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.18  E-value=0.13  Score=46.52  Aligned_cols=79  Identities=27%  Similarity=0.387  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHhc--C
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~~--~  262 (353)
                      .++++||+|+ +++|..++..+...|+ +|+.+++++++.+.+    ++.|... .  .|..+ .....+.+.+...  +
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence            5789999998 8999999998888999 788888888765433    3334332 1  22221 2223333332211  3


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++.+.|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=95.15  E-value=0.1  Score=46.57  Aligned_cols=83  Identities=24%  Similarity=0.292  Sum_probs=52.9

Q ss_pred             cCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce--E--eCCCC-CCccHHHHHHHH
Q 018627          190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--F--LNPND-NNEPVQQVIKRI  259 (353)
Q Consensus       190 ~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~--~--~~~~~-~~~~~~~~~~~~  259 (353)
                      +..+++++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+    ++.+...  +  .+... ...++.+.....
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            3457899999998 8999999999988999 899998887765433    3333221  1  12211 122333333222


Q ss_pred             hc--CCccEEEeccCC
Q 018627          260 TD--GGADYSFECIGD  273 (353)
Q Consensus       260 ~~--~~~dvv~d~~g~  273 (353)
                      ..  +.+|+++.+++.
T Consensus        87 ~~~~~~id~vi~~Ag~  102 (247)
T PRK08945         87 EEQFGRLDGVLHNAGL  102 (247)
T ss_pred             HHHhCCCCEEEECCcc
Confidence            21  378999998764

>PRK08317 hypothetical protein; Provisional

Probab=95.15  E-value=0.11  Score=45.82  Aligned_cols=102  Identities=23%  Similarity=0.350  Sum_probs=67.4

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhC--CC-c--eEeCCCCCCccHHHHHHHH
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF--GV-T--EFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~--G~-~--~~~~~~~~~~~~~~~~~~~  259 (353)
                      .+..++.++++||.+|+|. |..+..+++..+ ..++++++.+++.++.+++.  .. .  .++..+  ...+     ..
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~~-----~~   83 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADGL-----PF   83 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--cccC-----CC
Confidence            3567788999999999864 788888888763 23899999999988877664  11 1  111111  0100     11


Q ss_pred             hcCCccEEEecc-----CC-hHHHHHHHHHhccCCceEEEEcC
Q 018627          260 TDGGADYSFECI-----GD-TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       260 ~~~~~dvv~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .++.||+|+...     .. ...+....+.|+++ |.++....
T Consensus        84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  125 (241)
T PRK08317         84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLDT  125 (241)
T ss_pred             CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEec
Confidence            234789887532     12 34678888999997 99987653

>PRK08278 short chain dehydrogenase; Provisional

Probab=95.13  E-value=0.11  Score=47.37  Aligned_cols=79  Identities=25%  Similarity=0.351  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-------H----HHHHhCCCceE---eCCCCCCccHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------C----EKAKAFGVTEF---LNPNDNNEPVQQVIK  257 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-------~----~~~~~~G~~~~---~~~~~~~~~~~~~~~  257 (353)
                      .++++||+|+ |++|..++..+...|+ +|++++++.++       +    +.+++.+....   .|..+ ...+.+.+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~   82 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA   82 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence            5678999998 8999999999989999 88888876542       1    12233443221   23321 223333333


Q ss_pred             HHh--cCCccEEEeccCC
Q 018627          258 RIT--DGGADYSFECIGD  273 (353)
Q Consensus       258 ~~~--~~~~dvv~d~~g~  273 (353)
                      +..  -+.+|++|+++|.
T Consensus        83 ~~~~~~g~id~li~~ag~  100 (273)
T PRK08278         83 KAVERFGGIDICVNNASA  100 (273)
T ss_pred             HHHHHhCCCCEEEECCCC
Confidence            221  1379999999874

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.12  E-value=0.098  Score=54.13  Aligned_cols=76  Identities=25%  Similarity=0.330  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh---------------------hHHHHHhCCCceEeCCCCC-C
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPNDN-N  249 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~---------------------~~~~~~~~G~~~~~~~~~~-~  249 (353)
                      ..+++|+|+|+|+.|++++..++.+|+ +|+++++.+.                     ..+.++++|++...+..-. +
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            358999999999999999999999999 7888876543                     3456677887654443210 1


Q ss_pred             ccHHHHHHHHhcCCccEEEeccCC
Q 018627          250 EPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       250 ~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      ..+. .+.    ..||.||.++|.
T Consensus       404 i~~~-~~~----~~~DavilAtGa  422 (654)
T PRK12769        404 ISLE-SLL----EDYDAVFVGVGT  422 (654)
T ss_pred             CCHH-HHH----hcCCEEEEeCCC
Confidence            1111 111    269999998885

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.12  E-value=0.12  Score=46.97  Aligned_cols=77  Identities=23%  Similarity=0.275  Sum_probs=49.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--cCCc
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      +++||+|+ |++|..++..+...|+ +|++++++.++.+.+    ++.+.... +  |..+ ..++.+.+....  .+++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence            36899998 8999999999888999 898888888765533    22333321 2  2221 222233332221  2379


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++|.++|.
T Consensus        79 d~lI~~ag~   87 (270)
T PRK05650         79 DVIVNNAGV   87 (270)
T ss_pred             CEEEECCCC
Confidence            999999884

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.09  E-value=0.16  Score=46.27  Aligned_cols=82  Identities=18%  Similarity=0.314  Sum_probs=51.1

Q ss_pred             cCCCCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hhHHHH-HhCCCceEe--CCCCCCccHHHHHHHHh
Q 018627          190 DISKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKA-KAFGVTEFL--NPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       190 ~~~~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~---~~~~~~-~~~G~~~~~--~~~~~~~~~~~~~~~~~  260 (353)
                      ++-.++++||+|+   +++|+++++.+...|+ +|+.+.+++   ++++.+ ++++....+  |..+ ..+..+.+.+..
T Consensus         6 ~~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~   83 (272)
T PRK08159          6 GLMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLE   83 (272)
T ss_pred             ccccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHH
Confidence            3446789999986   4799999999999999 888876664   333333 344532222  2221 223333333322


Q ss_pred             --cCCccEEEeccCC
Q 018627          261 --DGGADYSFECIGD  273 (353)
Q Consensus       261 --~~~~dvv~d~~g~  273 (353)
                        .+.+|++++++|.
T Consensus        84 ~~~g~iD~lv~nAG~   98 (272)
T PRK08159         84 KKWGKLDFVVHAIGF   98 (272)
T ss_pred             HhcCCCcEEEECCcc
Confidence              2479999999873

>PLN02928 oxidoreductase family protein

Probab=95.03  E-value=0.26  Score=46.80  Aligned_cols=35  Identities=26%  Similarity=0.535  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .|+++.|+|.|.+|..+++.++.+|+ +|++.+++.
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~  192 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW  192 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence            57999999999999999999999999 999998763

>PLN03075 nicotianamine synthase; Provisional

Probab=95.01  E-value=0.17  Score=46.70  Aligned_cols=98  Identities=16%  Similarity=0.147  Sum_probs=64.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhCC-----CceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFG-----VTEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~G-----~~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      +.++|+-+|+|+.++.++.+++.+. -.+++.+|.+++..+.+++.-     ...-+...  ..+..+...  ..+.||+
T Consensus       123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~--~~Da~~~~~--~l~~FDl  198 (296)
T PLN03075        123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFH--TADVMDVTE--SLKEYDV  198 (296)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEE--ECchhhccc--ccCCcCE
Confidence            7899999999999998888887653 238999999999988886632     11211111  111211110  1247999


Q ss_pred             EEecc-------CChHHHHHHHHHhccCCceEEEEc
Q 018627          267 SFECI-------GDTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       267 v~d~~-------g~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ||-.+       .....++...+.|+++ |.++.=.
T Consensus       199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             EEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            99875       1234567778889996 7776554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.99  E-value=0.15  Score=49.19  Aligned_cols=81  Identities=20%  Similarity=0.331  Sum_probs=50.6

Q ss_pred             cCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHH-------HHHhC-CCceE-eCCCCCCccHHHHHHHH
Q 018627          190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-------KAKAF-GVTEF-LNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       190 ~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~-------~~~~~-G~~~~-~~~~~~~~~~~~~~~~~  259 (353)
                      +...+.+|||+|+ |.+|..+++.+...|. +|+++.++..+.+       ..+.. ++..+ .|..+ ...+.+.++..
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~  133 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSE  133 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHh
Confidence            4566889999998 9999999999988998 8998888765432       11122 22222 23221 22232223221


Q ss_pred             hcCCccEEEeccCC
Q 018627          260 TDGGADYSFECIGD  273 (353)
Q Consensus       260 ~~~~~dvv~d~~g~  273 (353)
                       ..++|+||+|++.
T Consensus       134 -~~~~D~Vi~~aa~  146 (390)
T PLN02657        134 -GDPVDVVVSCLAS  146 (390)
T ss_pred             -CCCCcEEEECCcc
Confidence             1169999998864

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.99  E-value=0.12  Score=46.72  Aligned_cols=104  Identities=19%  Similarity=0.232  Sum_probs=61.4

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCC------hhhHHHHHhCCCc-eE--eCCCCCCccHHHHHHHHh
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTN------PEKCEKAKAFGVT-EF--LNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~------~~~~~~~~~~G~~-~~--~~~~~~~~~~~~~~~~~~  260 (353)
                      .|+++||+|+   +++|.++++.+...|+ +|+.+.++      ++..+.+++.+.. ..  .|..+ .++..+.+....
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~   82 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK   82 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence            5789999986   4899999999999999 77766432      2233333332221 12  23321 233333333322


Q ss_pred             --cCCccEEEeccCCh-------H----------------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          261 --DGGADYSFECIGDT-------G----------------------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       261 --~~~~dvv~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                        -+.+|++++++|..       .                      ..+..+..++++ |+++.+++...
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~~  151 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLGG  151 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecccc
Confidence              24799999998731       0                      112344566675 99998876443

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=94.98  E-value=0.19  Score=47.61  Aligned_cols=36  Identities=22%  Similarity=0.376  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .+.+|||+|+|++|..++..+...|.++++.+|.+.
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            457899999999999999999999998999998864

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.96  E-value=0.088  Score=47.30  Aligned_cols=36  Identities=33%  Similarity=0.473  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .+.+|+|.|+|++|..+++.+...|.++++.+|.+.
T Consensus        23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            347899999999999999999999999999987654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.95  E-value=0.16  Score=45.68  Aligned_cols=36  Identities=31%  Similarity=0.465  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ...+|+|+|+|++|..++..+...|.++++.+|.+.
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~   66 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT   66 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            457899999999999999999999998998886554

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.95  E-value=0.49  Score=41.66  Aligned_cols=101  Identities=19%  Similarity=0.172  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeC-------CCCCCcc-HHHHHHHHh--
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLN-------PNDNNEP-VQQVIKRIT--  260 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~-------~~~~~~~-~~~~~~~~~--  260 (353)
                      .++.+||+.|+| .|.-++.+|. .|. +|++++.++.-++.+ ++.+......       +....-. +...+.++.  
T Consensus        33 ~~~~rvLd~GCG-~G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~  109 (213)
T TIGR03840        33 PAGARVFVPLCG-KSLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA  109 (213)
T ss_pred             CCCCeEEEeCCC-chhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence            577899999986 5777777775 699 999999999888765 3333221000       0000000 000000111  


Q ss_pred             -cCCccEEEeccCC--------hHHHHHHHHHhccCCceEEEEcC
Q 018627          261 -DGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       261 -~~~~dvv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                       .+.||.|+|+..-        +..+....++|+|+ |+++.++.
T Consensus       110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence             1368999997531        23466777899997 98776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.91  E-value=0.11  Score=46.63  Aligned_cols=75  Identities=19%  Similarity=0.252  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .|+++||+|+ |++|..+++.+...|+ +|+++++++++..   .-....+ .|..+ .....+.+.+..  .+++|+++
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            5789999998 8999999999999999 8999988765421   1011111 22221 222222222221  23799999


Q ss_pred             eccC
Q 018627          269 ECIG  272 (353)
Q Consensus       269 d~~g  272 (353)
                      +++|
T Consensus        83 ~~ag   86 (260)
T PRK06523         83 HVLG   86 (260)
T ss_pred             ECCc
Confidence            9987

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.91  E-value=0.1  Score=46.44  Aligned_cols=79  Identities=20%  Similarity=0.282  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhH----HHHHhCCCceE---eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKC----EKAKAFGVTEF---LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~----~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++.+||+|+ |++|..+++.+...|+ +|++. .++..+.    +.+++.+....   .|..+ ..++.+.+.+..  .
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence            3678999997 8999999999999999 66664 3333322    22233454332   23221 222333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|+++++.|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            479999999985

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.89  E-value=0.26  Score=45.24  Aligned_cols=95  Identities=20%  Similarity=0.263  Sum_probs=65.2

Q ss_pred             hhchhhhHHHHHHHHhccCC-CCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       173 ~l~~~~~ta~~al~~~~~~~-~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      .+||+....+. +.+..++. .|++|+|+|.| .+|.-++.++...|+ +|+.+.+.                     ..
T Consensus       136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~---------------------t~  192 (285)
T PRK14191        136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHIL---------------------TK  192 (285)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCC---------------------cH
Confidence            34444333333 33544543 69999999985 899999999999999 88777321                     12


Q ss_pred             cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ++.+.++     .+|+++-++|.+..+..  ..++++ ..++.+|...
T Consensus       193 ~l~~~~~-----~ADIvV~AvG~p~~i~~--~~vk~G-avVIDvGi~~  232 (285)
T PRK14191        193 DLSFYTQ-----NADIVCVGVGKPDLIKA--SMVKKG-AVVVDIGINR  232 (285)
T ss_pred             HHHHHHH-----hCCEEEEecCCCCcCCH--HHcCCC-cEEEEeeccc
Confidence            2333444     38999999998776554  467886 8999998643

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.88  E-value=0.16  Score=45.24  Aligned_cols=79  Identities=18%  Similarity=0.258  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEE-EcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~-~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      +++++||+|+ |.+|..++..+...|+ +|+. ..++.++.+.+    +..+... .+  |.. +..+....+.+..  .
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~   80 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVG-DVEKIKEMFAQIDEEF   80 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-CHHHHHHHHHHHHHHc
Confidence            4678999998 8999999999999999 6655 46666554332    3334332 22  222 1223333333322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (250)
T PRK08063         81 GRLDVFVNNAAS   92 (250)
T ss_pred             CCCCEEEECCCC
Confidence            378999998873

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=94.86  E-value=0.23  Score=43.45  Aligned_cols=100  Identities=17%  Similarity=0.153  Sum_probs=62.0

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      +..+++++++||-+|+| .|..+..+++.. . +|++++.+++..+.+++    .|...+....   .+..+...  ..+
T Consensus        72 ~~l~~~~~~~VLeiG~G-sG~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~--~~~  143 (212)
T PRK00312         72 ELLELKPGDRVLEIGTG-SGYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRH---GDGWKGWP--AYA  143 (212)
T ss_pred             HhcCCCCCCEEEEECCC-ccHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEE---CCcccCCC--cCC
Confidence            55678899999999875 244444555553 3 89999999887665543    4543321111   11111110  124


Q ss_pred             CccEEEeccCChHHHHHHHHHhccCCceEEEEc
Q 018627          263 GADYSFECIGDTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       263 ~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .||+|+-............+.|+++ |+++..-
T Consensus       144 ~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~  175 (212)
T PRK00312        144 PFDRILVTAAAPEIPRALLEQLKEG-GILVAPV  175 (212)
T ss_pred             CcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence            7998887655555667778999997 9987653

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=94.85  E-value=0.075  Score=50.31  Aligned_cols=77  Identities=14%  Similarity=0.201  Sum_probs=48.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC--c-eEeCCCCCCccHHHHHHHHhcC-CccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-EFLNPNDNNEPVQQVIKRITDG-GADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~--~-~~~~~~~~~~~~~~~~~~~~~~-~~dv  266 (353)
                      .|++|||+|+ |.+|..+++.+...|. +|+++++++...... +.++.  . ..+..+  -.+ .+.+.+...+ ++|+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D--l~~-~~~~~~~~~~~~~d~   78 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGD--IRD-AAKLRKAIAEFKPEI   78 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEcc--CCC-HHHHHHHHhhcCCCE
Confidence            4789999997 8999999999999998 888887766543221 22221  1 111111  111 1233333333 6899


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      ||++++.
T Consensus        79 vih~A~~   85 (349)
T TIGR02622        79 VFHLAAQ   85 (349)
T ss_pred             EEECCcc
Confidence            9999873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=94.85  E-value=0.13  Score=53.30  Aligned_cols=113  Identities=25%  Similarity=0.324  Sum_probs=66.4

Q ss_pred             eeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          148 FSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       148 ~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      ..+|.-+++...+.+ +-.+++++=.-..+          ....-.++++||+|+ |++|.++++.+...|+ +|+++++
T Consensus       379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r  446 (676)
T TIGR02632       379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL  446 (676)
T ss_pred             ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence            355666666666655 44444444111000          011124789999998 8999999999999999 8999988


Q ss_pred             ChhhHHHHHh-----CCCce--E--eCCCCCCccHHHHHHHHh--cCCccEEEeccCC
Q 018627          227 NPEKCEKAKA-----FGVTE--F--LNPNDNNEPVQQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       227 ~~~~~~~~~~-----~G~~~--~--~~~~~~~~~~~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      +.++.+.+.+     .+...  .  .|..+ ..++.+.+.+..  -+++|++|+++|.
T Consensus       447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~~g~iDilV~nAG~  503 (676)
T TIGR02632       447 NLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALAYGGVDIVVNNAGI  503 (676)
T ss_pred             CHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence            8876654421     23221  1  22221 223333333321  2479999999984

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=94.84  E-value=0.42  Score=42.11  Aligned_cols=79  Identities=18%  Similarity=0.319  Sum_probs=51.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC----ceEe--CCCC-CCccHHHHHHHHh--cCC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV----TEFL--NPND-NNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~----~~~~--~~~~-~~~~~~~~~~~~~--~~~  263 (353)
                      |++++++|+ |++|+....-+...|+ .+.+++-+.|+.+...++-+    ..++  .++- ...++.+..++..  -+.
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgi-k~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~   83 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGI-KVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT   83 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCc-hheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence            899999976 9999999999999999 77777777777666655432    1121  1110 1233333444332  247


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|+.++..|-
T Consensus        84 iDIlINgAGi   93 (261)
T KOG4169|consen   84 IDILINGAGI   93 (261)
T ss_pred             eEEEEccccc
Confidence            8999998774

>TIGR02415 23BDH acetoin reductases

Probab=94.83  E-value=0.17  Score=45.25  Aligned_cols=77  Identities=19%  Similarity=0.252  Sum_probs=49.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCc
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      +++||+|+ |++|..+++.+...|+ +|+.+.+++++.+.+    ++.+... .+  |..+ ...+.+.+....  .+.+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence            46899997 8999999999999999 888888887654433    3334322 11  3221 223333333322  2368


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+++.+.|.
T Consensus        79 d~vi~~ag~   87 (254)
T TIGR02415        79 DVMVNNAGV   87 (254)
T ss_pred             CEEEECCCc
Confidence            999999874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=94.83  E-value=0.21  Score=43.91  Aligned_cols=35  Identities=29%  Similarity=0.355  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      ...+|+|+|+|++|..+++.+...|..+++.+|.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45789999999999999999999999889999877

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=94.80  E-value=0.24  Score=45.76  Aligned_cols=36  Identities=22%  Similarity=0.377  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .++++||+|+|+.+.+++..+..+|+++++++.|++
T Consensus       123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~  158 (288)
T PRK12749        123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD  158 (288)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            578999999999999888877788998999998984

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.79  E-value=0.22  Score=45.16  Aligned_cols=78  Identities=18%  Similarity=0.331  Sum_probs=48.2

Q ss_pred             CCCEEEEEcCC---hHHHHHHHHHHHCCCCeEEEEcCChh---hHHHHHh-CCCceEe--CCCCCCccHHHHHHHHhc--
Q 018627          193 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPE---KCEKAKA-FGVTEFL--NPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       193 ~g~~vLV~Gag---~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~~~-~G~~~~~--~~~~~~~~~~~~~~~~~~--  261 (353)
                      .|+++||+|++   ++|.++++.+...|+ +|+.++++++   ..+.+++ .+....+  |..+ ..++...+.+...  
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence            57899999873   799999999988999 8888877632   2222222 2322222  3321 2333333333322  


Q ss_pred             CCccEEEeccC
Q 018627          262 GGADYSFECIG  272 (353)
Q Consensus       262 ~~~dvv~d~~g  272 (353)
                      +.+|++++++|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            47999999997

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.78  E-value=0.093  Score=45.93  Aligned_cols=101  Identities=20%  Similarity=0.293  Sum_probs=65.9

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc-
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD-  261 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~-  261 (353)
                      .+....++||-+|.+ +|..++.+|+++  +. +|+.++.++++.+.+++    .|...-+...  ..+..+.+.++.+ 
T Consensus        41 ~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~--~gda~~~l~~l~~~  116 (205)
T PF01596_consen   41 VRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVI--EGDALEVLPELAND  116 (205)
T ss_dssp             HHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEE--ES-HHHHHHHHHHT
T ss_pred             HHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEE--EeccHhhHHHHHhc
Confidence            344566899999864 688888999887  44 99999999999887744    5654322222  2344555555432 


Q ss_pred             ---CCccEEEeccCC---hHHHHHHHHHhccCCceEEEE
Q 018627          262 ---GGADYSFECIGD---TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       262 ---~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~  294 (353)
                         +.||.||--...   ...++.++++++++ |.++.=
T Consensus       117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~D  154 (205)
T PF01596_consen  117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIAD  154 (205)
T ss_dssp             TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEc
Confidence               369987754443   23467778899995 766644

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.75  E-value=0.27  Score=45.49  Aligned_cols=94  Identities=19%  Similarity=0.242  Sum_probs=64.6

Q ss_pred             hhchhhhHHHHHHHHhccC-CCCCEEEEEc-CChHHHHHHHHHHHCCCCeEEEEc-CChhhHHHHHhCCCceEeCCCCCC
Q 018627          173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVD-TNPEKCEKAKAFGVTEFLNPNDNN  249 (353)
Q Consensus       173 ~l~~~~~ta~~al~~~~~~-~~g~~vLV~G-ag~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~~~~~G~~~~~~~~~~~  249 (353)
                      .+||+....+. +.+..++ -.|++|+|+| .+.+|.-++.++...|+ +|++.. ++.                     
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~---------------------  193 (296)
T PRK14188        137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR---------------------  193 (296)
T ss_pred             CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence            34544333333 2344443 4699999999 48899999999999999 888883 322                     


Q ss_pred             ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       250 ~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                       ++.+.++     ..|+|+-++|.+..+...+  ++++ ..++.+|...
T Consensus       194 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~  233 (296)
T PRK14188        194 -DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR  233 (296)
T ss_pred             -CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence             1222222     4899999999977666654  8886 8899998653

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.74  E-value=0.42  Score=39.07  Aligned_cols=82  Identities=20%  Similarity=0.229  Sum_probs=59.0

Q ss_pred             HhccC-CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627          187 NVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       187 ~~~~~-~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      +..++ -.|++|+|+|. ..+|.-++.++...|+ +|+.+.+...                     ++.+.++     ..
T Consensus        20 ~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------~l~~~v~-----~A   72 (140)
T cd05212          20 NKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------QLQSKVH-----DA   72 (140)
T ss_pred             HHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------CHHHHHh-----hC
Confidence            43443 36999999997 7799999999999999 8888864321                     2233333     38


Q ss_pred             cEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      |+|+-++|.+..+..  +.++++ -.++.+|...
T Consensus        73 DIVvsAtg~~~~i~~--~~ikpG-a~Vidvg~~~  103 (140)
T cd05212          73 DVVVVGSPKPEKVPT--EWIKPG-ATVINCSPTK  103 (140)
T ss_pred             CEEEEecCCCCccCH--HHcCCC-CEEEEcCCCc
Confidence            999999998655443  568886 7888777543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK04266 fibrillarin; Provisional

Probab=94.73  E-value=0.49  Score=42.08  Aligned_cols=102  Identities=16%  Similarity=0.136  Sum_probs=60.1

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      +...+++|++||=.|+| .|.....+++..+..+|++++.+++.++.+.+    ......+.-+  ..+. ..... ..+
T Consensus        66 ~~l~i~~g~~VlD~G~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D--~~~~-~~~~~-l~~  140 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILAD--ARKP-ERYAH-VVE  140 (226)
T ss_pred             hhCCCCCCCEEEEEccC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECC--CCCc-chhhh-ccc
Confidence            44688999999999874 24444555665543489999999976664422    2111122111  1110 00011 123


Q ss_pred             CccEEEeccCChH----HHHHHHHHhccCCceEEEE
Q 018627          263 GADYSFECIGDTG----MITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       263 ~~dvv~d~~g~~~----~~~~~~~~l~~~~G~~v~~  294 (353)
                      .+|+++.....+.    .+..+.+.|+++ |+++..
T Consensus       141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            6999996554322    356777899997 999884

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.71  E-value=0.41  Score=43.24  Aligned_cols=97  Identities=19%  Similarity=0.191  Sum_probs=66.1

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      .+.....++++||-+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+...+. .     +.. .+  ...+.|
T Consensus        22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-~-----d~~-~~--~~~~~f   90 (255)
T PRK14103         22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-G-----DVR-DW--KPKPDT   90 (255)
T ss_pred             HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-c-----Chh-hC--CCCCCc
Confidence            3555677889999998853 66666777765 55 899999999998888776543222 1     111 11  112479


Q ss_pred             cEEEeccC-----C-hHHHHHHHHHhccCCceEEEE
Q 018627          265 DYSFECIG-----D-TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       265 dvv~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      |+|+....     . ...+....+.|+|+ |+++..
T Consensus        91 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         91 DVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             eEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            99987543     1 34567788889997 998865

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.70  E-value=0.19  Score=48.73  Aligned_cols=74  Identities=20%  Similarity=0.327  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCc-eEe--CCCCCCccHHHHHHHHhcCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT-EFL--NPNDNNEPVQQVIKRITDGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~-~~~--~~~~~~~~~~~~~~~~~~~~~dvv  267 (353)
                      .++++||+|+ |++|.+++..+...|+ +|+++++++++.+... +.+.. ..+  |..  +   .+.+.+.. +++|++
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs--d---~~~v~~~l-~~IDiL  249 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVG--Q---EAALAELL-EKVDIL  249 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC--C---HHHHHHHh-CCCCEE
Confidence            4789999998 8999999999888999 8888888876654322 11111 112  222  1   12233322 369999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      +.+.|.
T Consensus       250 InnAGi  255 (406)
T PRK07424        250 IINHGI  255 (406)
T ss_pred             EECCCc
Confidence            998774

>PLN02244 tocopherol O-methyltransferase

Probab=94.68  E-value=0.16  Score=48.13  Aligned_cols=95  Identities=20%  Similarity=0.314  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce---EeCCCCCCccHHHHHHHHhcCCc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~---~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      +++++||-+|+| .|..+..+++..|+ +|++++.++...+.+++    .|...   ++..+  ..++     ...++.|
T Consensus       117 ~~~~~VLDiGCG-~G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~~-----~~~~~~F  187 (340)
T PLN02244        117 KRPKRIVDVGCG-IGGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALNQ-----PFEDGQF  187 (340)
T ss_pred             CCCCeEEEecCC-CCHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--cccC-----CCCCCCc
Confidence            688999999875 45666777877788 99999999987776644    34321   11111  0000     1123479


Q ss_pred             cEEEeccCC------hHHHHHHHHHhccCCceEEEEcC
Q 018627          265 DYSFECIGD------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       265 dvv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      |+|+..-..      ...+....+.|+++ |+++.+..
T Consensus       188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        188 DLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             cEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            999864321      24567788999997 99998754

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.66  E-value=0.37  Score=44.45  Aligned_cols=69  Identities=25%  Similarity=0.346  Sum_probs=50.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG  275 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~  275 (353)
                      +|.|+|.|.+|..++..+...|. +|++.++++++.+.+.+.|....       .+..+.+.     ..|+||.|+..+.
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivi~~vp~~~   67 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETARQVTE-----QADVIFTMVPDSP   67 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHHHHHh-----cCCEEEEecCCHH
Confidence            37788999999999888888898 89999999999988887775321       12222222     4788888887643


Q ss_pred             HH
Q 018627          276 MI  277 (353)
Q Consensus       276 ~~  277 (353)
                      ..
T Consensus        68 ~~   69 (291)
T TIGR01505        68 QV   69 (291)
T ss_pred             HH
Confidence            33

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12746 short chain dehydrogenase; Provisional

Probab=94.66  E-value=0.62  Score=41.60  Aligned_cols=79  Identities=15%  Similarity=0.271  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEE-EcCChhhHHHH-Hh---CCCce-Ee--CCCCCCccHHHHHHHH---h
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA-KA---FGVTE-FL--NPNDNNEPVQQVIKRI---T  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~-~~~~~~~~~~~-~~---~G~~~-~~--~~~~~~~~~~~~~~~~---~  260 (353)
                      .+.+++|+|+ |++|..+++.+...|+ +|++ ..+++++.+.+ .+   .+... ++  |..+ ..++.+.+.+.   .
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~   82 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence            4678999998 8999999999988899 6655 45666554322 22   23221 22  3321 23333333332   1


Q ss_pred             ----c-CCccEEEeccCC
Q 018627          261 ----D-GGADYSFECIGD  273 (353)
Q Consensus       261 ----~-~~~dvv~d~~g~  273 (353)
                          + +++|++|.+.|.
T Consensus        83 ~~~~~~~~id~vi~~ag~  100 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccccCCCCccEEEECCCC
Confidence                1 368999998874

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=94.66  E-value=0.22  Score=44.88  Aligned_cols=78  Identities=23%  Similarity=0.289  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHHH----H-hCCCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA----K-AFGVTE-FL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~-~~G~~~-~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ +++|.+++..+...|+ +|+.+. +++++.+.+    + +.+... .+  |..+ ..++.+.+.+..  
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~   84 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence            5789999998 8999999999999999 777764 444444322    1 123221 22  3321 223333333322  


Q ss_pred             cCCccEEEeccC
Q 018627          261 DGGADYSFECIG  272 (353)
Q Consensus       261 ~~~~dvv~d~~g  272 (353)
                      .+.+|++++++|
T Consensus        85 ~g~id~lv~nAg   96 (260)
T PRK08416         85 FDRVDFFISNAI   96 (260)
T ss_pred             cCCccEEEECcc
Confidence            247899999885

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.63  E-value=0.34  Score=44.44  Aligned_cols=93  Identities=16%  Similarity=0.275  Sum_probs=65.4

Q ss_pred             hchhhhHHHHHHHHhccCC-CCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCcc
Q 018627          174 LSCGLSAGLGAAWNVADIS-KGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP  251 (353)
Q Consensus       174 l~~~~~ta~~al~~~~~~~-~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~  251 (353)
                      .||+....+..+ +..++. .|++|+|+|-| .+|.-++.++...|+ +|+.+.+.                     ..+
T Consensus       139 ~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~---------------------T~~  195 (285)
T PRK10792        139 RPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRF---------------------TKN  195 (285)
T ss_pred             CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECC---------------------CCC
Confidence            454433333333 444543 59999999974 599999999999999 88887432                     123


Q ss_pred             HHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          252 VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       252 ~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +.+.++     .+|+++.++|.+..+..  ..++++ ..++.+|..
T Consensus       196 l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin  233 (285)
T PRK10792        196 LRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN  233 (285)
T ss_pred             HHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence            333444     39999999998776554  678986 889999843

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.61  E-value=0.18  Score=46.20  Aligned_cols=69  Identities=16%  Similarity=0.132  Sum_probs=50.7

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      ....++++||+|+|+.+.+++..+..+|+++|+++.|+.++.+.+.+ ++..    +       .+.+   ....+|+|+
T Consensus       118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-------~~~~---~~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-------RPDL---GGIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-------hhhc---ccccCCEEE
Confidence            44456799999999999999999999999889999999988776643 3311    1       0111   112589999


Q ss_pred             eccC
Q 018627          269 ECIG  272 (353)
Q Consensus       269 d~~g  272 (353)
                      +|++
T Consensus       184 NaTp  187 (272)
T PRK12550        184 NVTP  187 (272)
T ss_pred             ECCc
Confidence            9986

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.60  E-value=0.22  Score=44.00  Aligned_cols=79  Identities=23%  Similarity=0.373  Sum_probs=46.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh-hHH----HHHhCCCce-Ee--CCCCCCccHHHHHHHHhc--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVTE-FL--NPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~-~~~----~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~~--  261 (353)
                      .++++||+|+ |.+|..++..+...|+ +|+++.++.. +.+    .++..+... .+  |..+ ...+.+.+.+...  
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4578999998 8999999999999999 6755545443 222    222233222 22  3321 2223333333222  


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|.++.++|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            368999998874

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=94.59  E-value=0.47  Score=42.86  Aligned_cols=96  Identities=21%  Similarity=0.185  Sum_probs=60.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcCCccEE
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGGADYS  267 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv  267 (353)
                      .++.+||-+|+| .|..+..+++. |. +|++++.+++.++.+++    .|...-+...  ..+.. .+.....+.||+|
T Consensus        43 ~~~~~vLDiGcG-~G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~--~~d~~-~l~~~~~~~fD~V  116 (255)
T PRK11036         43 PRPLRVLDAGGG-EGQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFI--HCAAQ-DIAQHLETPVDLI  116 (255)
T ss_pred             CCCCEEEEeCCC-chHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEE--EcCHH-HHhhhcCCCCCEE
Confidence            456789988875 46667777764 77 99999999998887755    3322111110  11221 2222234589999


Q ss_pred             EeccC-----C-hHHHHHHHHHhccCCceEEEE
Q 018627          268 FECIG-----D-TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       268 ~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      +-...     . ...+..+.+.|+|+ |+++.+
T Consensus       117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~  148 (255)
T PRK11036        117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM  148 (255)
T ss_pred             EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            85421     2 24577888999997 999765

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.59  E-value=0.26  Score=46.13  Aligned_cols=36  Identities=25%  Similarity=0.317  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.++..+
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~  170 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK  170 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence            57999999999999999999999999 8999876544

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=94.59  E-value=0.6  Score=43.10  Aligned_cols=111  Identities=17%  Similarity=0.109  Sum_probs=72.0

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC---Cce--EeCCCCCCccHH---HHHHHHhc
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---VTE--FLNPNDNNEPVQ---QVIKRITD  261 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G---~~~--~~~~~~~~~~~~---~~~~~~~~  261 (353)
                      ..+++-|+|+|+ +++|..++.-+-..|. +|++.--.++..+.++..-   --.  .+|.. +++.+.   +.+++..+
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT-~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVT-KPESVKEAAQWVKKHLG  103 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccC-CHHHHHHHHHHHHHhcc
Confidence            445677999999 9999999999999999 8888877777766664421   111  12322 133333   33444445


Q ss_pred             C-CccEEEeccCCh--------------------------HHHHHHHHHhccCCceEEEEcCCCCCCce
Q 018627          262 G-GADYSFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPKLKPEV  303 (353)
Q Consensus       262 ~-~~dvv~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~~~~~  303 (353)
                      + +.-.+++++|..                          ......+.++++..||+|.+++..+....
T Consensus       104 ~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~  172 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVAL  172 (322)
T ss_pred             cccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccC
Confidence            5 788899998832                          11223334566656999999987775443

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.59  E-value=0.13  Score=43.30  Aligned_cols=44  Identities=20%  Similarity=0.277  Sum_probs=38.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      .|..||++|+ -++|...++-+...|+ +|+++.++++.+..+-+.
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e   50 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKE   50 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhh
Confidence            5788999998 4799999999999999 999999999998877543

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.55  E-value=0.31  Score=44.73  Aligned_cols=82  Identities=18%  Similarity=0.323  Sum_probs=61.0

Q ss_pred             HhccCC-CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627          187 NVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       187 ~~~~~~-~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      +..++. .|++|+|+|. ..+|.-++.++...|+ +|+.+.+.                     ..++.+.++     ..
T Consensus       150 ~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~---------------------t~~l~~~~~-----~A  202 (285)
T PRK14189        150 ESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK---------------------TRDLAAHTR-----QA  202 (285)
T ss_pred             HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC---------------------CCCHHHHhh-----hC
Confidence            444433 6999999998 5579999999999999 88876321                     223444444     38


Q ss_pred             cEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      |+|+-++|.+..+..  ..++++ ..++.+|...
T Consensus       203 DIVV~avG~~~~i~~--~~ik~g-avVIDVGin~  233 (285)
T PRK14189        203 DIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMNR  233 (285)
T ss_pred             CEEEEcCCCcCccCH--HHcCCC-CEEEEccccc
Confidence            999999998766554  789997 8999999653

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=94.55  E-value=0.022  Score=47.02  Aligned_cols=95  Identities=22%  Similarity=0.210  Sum_probs=58.1

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC----CCccHHHHHHHHhcCCccEEEeccC
Q 018627          197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND----NNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       197 vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      |+|.|+|.+|...+..+...|. .|..+.+++ +.+.+++.|..-.....+    ........  ....+.+|++|-|+-
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6899999999999988888998 899998888 777777765432211100    00000000  112347999999986


Q ss_pred             ChHHHHHHHHH----hccCCceEEEEcCC
Q 018627          273 DTGMITTALQS----CCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~~~~~~~~~~----l~~~~G~~v~~g~~  297 (353)
                      ... ...+++.    +.++ ..++.+.+.
T Consensus        77 a~~-~~~~l~~l~~~~~~~-t~iv~~qNG  103 (151)
T PF02558_consen   77 AYQ-LEQALQSLKPYLDPN-TTIVSLQNG  103 (151)
T ss_dssp             GGG-HHHHHHHHCTGEETT-EEEEEESSS
T ss_pred             ccc-hHHHHHHHhhccCCC-cEEEEEeCC
Confidence            533 3444444    4443 567777654

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.52  E-value=0.39  Score=44.41  Aligned_cols=94  Identities=18%  Similarity=0.248  Sum_probs=65.4

Q ss_pred             hhchhhhHHHHHHHHhccC-CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       173 ~l~~~~~ta~~al~~~~~~-~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      .+||+....+. +.+..++ -.|++|.|+|. +.+|.-++.++...|+ +|++..+...                     
T Consensus       138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~---------------------  194 (301)
T PRK14194        138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST---------------------  194 (301)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence            34544333333 3344444 36999999998 5899999999999999 8888854321                     


Q ss_pred             cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +..+.++     ..|+|+-++|.+..+...+  ++++ ..++.+|..
T Consensus       195 ~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin  233 (301)
T PRK14194        195 DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN  233 (301)
T ss_pred             CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence            2222333     3899999999877766654  8886 889999854

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.50  E-value=0.26  Score=41.26  Aligned_cols=82  Identities=20%  Similarity=0.321  Sum_probs=51.9

Q ss_pred             Hhcc-CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627          187 NVAD-ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       187 ~~~~-~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      +..+ --.|++|+|+|. ..+|.-++.++...|+ +|....+.-                     .++.+.++     ..
T Consensus        28 ~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T---------------------~~l~~~~~-----~A   80 (160)
T PF02882_consen   28 EYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKT---------------------KNLQEITR-----RA   80 (160)
T ss_dssp             HHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTS---------------------SSHHHHHT-----TS
T ss_pred             HhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCC---------------------Ccccceee-----ec
Confidence            4444 347999999997 6799999999999999 888874432                     22333333     48


Q ss_pred             cEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      |+|+.++|.+..+..  +.++++ ..++.+|...
T Consensus        81 DIVVsa~G~~~~i~~--~~ik~g-avVIDvG~~~  111 (160)
T PF02882_consen   81 DIVVSAVGKPNLIKA--DWIKPG-AVVIDVGINY  111 (160)
T ss_dssp             SEEEE-SSSTT-B-G--GGS-TT-EEEEE--CEE
T ss_pred             cEEeeeecccccccc--ccccCC-cEEEecCCcc
Confidence            999999998766543  478886 8888888643

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.50  E-value=0.11  Score=46.87  Aligned_cols=76  Identities=18%  Similarity=0.268  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.   ..+..+ .|..+ ..++.+.+....  .+++|+++
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            4688999997 8999999999999999 88888777655321   111111 23321 223333333322  23789999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      .+.|.
T Consensus        83 ~~Ag~   87 (266)
T PRK06171         83 NNAGI   87 (266)
T ss_pred             ECCcc
Confidence            99873

>TIGR00417 speE spermidine synthase

Probab=94.49  E-value=0.3  Score=44.63  Aligned_cols=99  Identities=14%  Similarity=0.114  Sum_probs=60.8

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC-Cc------eEeCCCCCCccHHHHHHHHhcCCc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-VT------EFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G-~~------~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      ...++||++|+|. |..+..+++....+++++++.+++-.+.++++- ..      .-+...  ..+..+.++. ..+.+
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~--~~D~~~~l~~-~~~~y  146 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQ--IDDGFKFLAD-TENTF  146 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEE--ECchHHHHHh-CCCCc
Confidence            4456999998753 445556666665668999999988877776631 10      000000  1222333333 24589


Q ss_pred             cEEEeccC----------ChHHHHHHHHHhccCCceEEEEc
Q 018627          265 DYSFECIG----------DTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       265 dvv~d~~g----------~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      |+|+-...          ..+.++.+.+.|+++ |.++...
T Consensus       147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            98875332          124467788899997 9998764

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.48  E-value=0.51  Score=43.58  Aligned_cols=71  Identities=20%  Similarity=0.304  Sum_probs=51.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      .+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...       .++.+.+.     ..|+||.|+..+
T Consensus         3 ~~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~~~~e~~~-----~~d~vi~~vp~~   69 (296)
T PRK11559          3 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA-------STAKAVAE-----QCDVIITMLPNS   69 (296)
T ss_pred             ceEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHh-----cCCEEEEeCCCH
Confidence            368899999999988888888898 89999999998888877765311       12222222     478888888764


Q ss_pred             HHHH
Q 018627          275 GMIT  278 (353)
Q Consensus       275 ~~~~  278 (353)
                      ....
T Consensus        70 ~~~~   73 (296)
T PRK11559         70 PHVK   73 (296)
T ss_pred             HHHH
Confidence            4433

>PRK09135 pteridine reductase; Provisional

Probab=94.48  E-value=0.27  Score=43.59  Aligned_cols=78  Identities=14%  Similarity=0.146  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhhHHHH----HhC-CC-ceE--eCCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCEKA----KAF-GV-TEF--LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~-~~~~~~~----~~~-G~-~~~--~~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ |.+|..++..+...|+ +|++++++ +++.+.+    +.. +. ...  .|..+ .+.+...+....  
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   82 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            4578999998 8999999999988999 88888775 3333332    122 11 111  23321 222333333221  


Q ss_pred             cCCccEEEeccC
Q 018627          261 DGGADYSFECIG  272 (353)
Q Consensus       261 ~~~~dvv~d~~g  272 (353)
                      -+.+|++|.++|
T Consensus        83 ~~~~d~vi~~ag   94 (249)
T PRK09135         83 FGRLDALVNNAS   94 (249)
T ss_pred             cCCCCEEEECCC
Confidence            236899999987

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=94.48  E-value=0.25  Score=46.77  Aligned_cols=36  Identities=25%  Similarity=0.388  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ...+|+|+|+|++|..++..+...|..++..+|.+.
T Consensus        23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            457899999999999999999999999999998763

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.47  E-value=0.6  Score=37.57  Aligned_cols=87  Identities=17%  Similarity=0.292  Sum_probs=52.2

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCC--CCeEEEEcCC--hhh-HHHHHhCCCceEeCCCCCCccHHHHHH-------------
Q 018627          197 VVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTN--PEK-CEKAKAFGVTEFLNPNDNNEPVQQVIK-------------  257 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g--~~~vi~~~~~--~~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~-------------  257 (353)
                      |.|+|+ |++|..++.+++...  + +|++....  -++ .+++++|....+...+   +...+.++             
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~---~~~~~~l~~~~~~~~~~~~v~   76 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIAD---EEAYEELKKALPSKGPGIEVL   76 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESS---HHHHHHHHHHHHHTTSSSEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHHhhhcCCCCEEE
Confidence            568898 999999999999986  5 66665332  233 3345778777766553   22222332             


Q ss_pred             -------HHhc-CCccEEEeccCChHHHHHHHHHhccC
Q 018627          258 -------RITD-GGADYSFECIGDTGMITTALQSCCDG  287 (353)
Q Consensus       258 -------~~~~-~~~dvv~d~~g~~~~~~~~~~~l~~~  287 (353)
                             ++.. ..+|+++.++.+...+...+..++.+
T Consensus        77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g  114 (129)
T PF02670_consen   77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG  114 (129)
T ss_dssp             ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred             eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence                   2222 36777777776666677777777763

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=94.46  E-value=0.14  Score=44.66  Aligned_cols=35  Identities=37%  Similarity=0.522  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      ...+|+|.|+|++|...++.+...|.++++.+|.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45789999999999999999999999889999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=94.44  E-value=0.42  Score=46.79  Aligned_cols=106  Identities=10%  Similarity=0.104  Sum_probs=63.2

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEe-CCCCCCccHHHHHHHHhc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFL-NPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~-~~~~~~~~~~~~~~~~~~  261 (353)
                      ...++++|++||-+|+| .|..++.+++.++..+|++++.++++++.+    +++|....+ ....+..... .  ....
T Consensus       232 ~~L~~~~g~~VLDlcag-~G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~-~--~~~~  307 (426)
T TIGR00563       232 TWLAPQNEETILDACAA-PGGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPS-Q--WAEN  307 (426)
T ss_pred             HHhCCCCCCeEEEeCCC-ccHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccccccc-c--cccc
Confidence            44578899999999764 233333445544433899999999998766    346765211 1110011000 0  0012


Q ss_pred             CCccEEEe---ccCC-------------------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627          262 GGADYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       262 ~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +.||.||-   |+|.                         ...+..+++.++++ |++|..-.+
T Consensus       308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystcs  370 (426)
T TIGR00563       308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATCS  370 (426)
T ss_pred             cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeCC
Confidence            37998874   4442                         13667788899997 999976544

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.44  E-value=0.49  Score=35.00  Aligned_cols=35  Identities=34%  Similarity=0.569  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      -.+++++|.|.|.+|..+++.+...+..++.+.++
T Consensus        21 ~~~~~v~i~G~G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGAGEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            46789999999999999999999986557877765

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.44  E-value=0.36  Score=44.29  Aligned_cols=88  Identities=17%  Similarity=0.291  Sum_probs=57.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG  275 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~  275 (353)
                      +|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|......     .+. +.+     ...|+||-|+....
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~-----~~~-~~~-----~~aDlVilavp~~~   69 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAS-----TDL-SLL-----KDCDLVILALPIGL   69 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccccc-----CCH-hHh-----cCCCEEEEcCCHHH
Confidence            58899999999999988888898 8999999999988888877432111     111 111     25788888887533


Q ss_pred             H---HHHHHHHhccCCceEEEEcC
Q 018627          276 M---ITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       276 ~---~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .   +......++++ -.++.+++
T Consensus        70 ~~~~~~~l~~~l~~~-~ii~d~~S   92 (279)
T PRK07417         70 LLPPSEQLIPALPPE-AIVTDVGS   92 (279)
T ss_pred             HHHHHHHHHHhCCCC-cEEEeCcc
Confidence            2   22222334443 44555554

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=94.42  E-value=0.65  Score=43.26  Aligned_cols=37  Identities=27%  Similarity=0.363  Sum_probs=30.2

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChhhH
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKC  231 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~~~  231 (353)
                      .|+++||+|+   .++|.++++.+...|+ +|+. .++.+++
T Consensus         8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l   47 (303)
T PLN02730          8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPAL   47 (303)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchh
Confidence            5899999988   7899999999999999 7777 3454443

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.42  E-value=0.43  Score=45.00  Aligned_cols=37  Identities=38%  Similarity=0.504  Sum_probs=33.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK  230 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~  230 (353)
                      .|.+|.|+|.|.+|..+++.++..|. +|++.+++.+.
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~  181 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNK  181 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhH
Confidence            57899999999999999999999999 99999887654

>PRK08223 hypothetical protein; Validated

Probab=94.41  E-value=0.2  Score=46.06  Aligned_cols=36  Identities=28%  Similarity=0.258  Sum_probs=32.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ...+|||.|+|++|..++..+.++|.+++..+|.+.
T Consensus        26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            457899999999999999999999999999987654

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=94.41  E-value=0.67  Score=36.08  Aligned_cols=92  Identities=23%  Similarity=0.303  Sum_probs=60.0

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHH
Q 018627          197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM  276 (353)
Q Consensus       197 vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~  276 (353)
                      |+|.|.|.+|..+++.++..+. .|++++.++++.+.+++.|.. ++.-+   ..-.+.+++..-..++.++-+++....
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd---~~~~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGD---ATDPEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES----TTSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-ccccc---chhhhHHhhcCccccCEEEEccCCHHH
Confidence            5788999999999999999776 899999999999999998854 33222   112234444322378888888776432


Q ss_pred             ---HHHHHHHhccCCceEEEE
Q 018627          277 ---ITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       277 ---~~~~~~~l~~~~G~~v~~  294 (353)
                         .....+.+.+. .+++..
T Consensus        76 n~~~~~~~r~~~~~-~~ii~~   95 (116)
T PF02254_consen   76 NLLIALLARELNPD-IRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHTTT-SEEEEE
T ss_pred             HHHHHHHHHHHCCC-CeEEEE
Confidence               12222334444 555544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.41  E-value=0.52  Score=42.50  Aligned_cols=99  Identities=19%  Similarity=0.261  Sum_probs=66.2

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHh--
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~--  260 (353)
                      .+....++||=+|.+ +|..++.+|+.+  +. +|+.++.+++..+.++    +.|..+-+...  ..+..+.+.++.  
T Consensus        75 ~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~--~G~a~e~L~~l~~~  150 (247)
T PLN02589         75 LKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFR--EGPALPVLDQMIED  150 (247)
T ss_pred             HHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEE--eccHHHHHHHHHhc
Confidence            445566788888763 688888888877  34 8999999998877664    45654433332  334555665543  


Q ss_pred             ---cCCccEEEeccCC---hHHHHHHHHHhccCCceEE
Q 018627          261 ---DGGADYSFECIGD---TGMITTALQSCCDGWGLAV  292 (353)
Q Consensus       261 ---~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v  292 (353)
                         .+.||.||--...   ...++.++++++++ |.++
T Consensus       151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv  187 (247)
T PLN02589        151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIG  187 (247)
T ss_pred             cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEE
Confidence               2489988865442   24467778899996 7765

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=94.41  E-value=0.22  Score=42.40  Aligned_cols=96  Identities=16%  Similarity=0.249  Sum_probs=61.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +|.|+|+ |-+|...++=|+..|- .|+++.|+++|....+..   .++. . +-.+..+....+  .++|+||++.|..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q-~-Difd~~~~a~~l--~g~DaVIsA~~~~   73 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQ-K-DIFDLTSLASDL--AGHDAVISAFGAG   73 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeec-c-cccChhhhHhhh--cCCceEEEeccCC
Confidence            5788898 8899999999999998 999999999998664221   1111 0 011111111111  2799999998863


Q ss_pred             --H-------HHHHHHHHhccC-CceEEEEcCCCC
Q 018627          275 --G-------MITTALQSCCDG-WGLAVTLGVPKL  299 (353)
Q Consensus       275 --~-------~~~~~~~~l~~~-~G~~v~~g~~~~  299 (353)
                        .       ..+..+..++.. --|+..+|..++
T Consensus        74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS  108 (211)
T COG2910          74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS  108 (211)
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence              1       123355666662 247888886543

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.38  E-value=0.44  Score=38.86  Aligned_cols=32  Identities=28%  Similarity=0.511  Sum_probs=28.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      +|+|.|+|++|..++..+...|.++++.+|.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            48899999999999999999999889999765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=94.37  E-value=0.78  Score=43.06  Aligned_cols=39  Identities=23%  Similarity=0.319  Sum_probs=34.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~  234 (353)
                      ++|.|+|+|.+|...++.+...|. .|++.+.+++.++.+
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~   46 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL   46 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence            679999999999999999999999 999999998765543

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=94.37  E-value=0.2  Score=45.98  Aligned_cols=96  Identities=18%  Similarity=0.155  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      ..++++||+|+|++|.+++..+...|+.+|+++.|+.++.+.+.+ ++....+...   .+..+.     -..+|+|++|
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~---~~~~~~-----~~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD---LELQEE-----LADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec---ccchhc-----cccCCEEEEC
Confidence            457899999999999999999999996699999999988766643 3321101110   001111     1368999999


Q ss_pred             cCChHH-----HHHHHHHhccCCceEEEEcC
Q 018627          271 IGDTGM-----ITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       271 ~g~~~~-----~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ++....     .......+++. ..++++-.
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~DivY  222 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMIY  222 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence            874211     01123566775 77777744

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=94.36  E-value=0.72  Score=39.47  Aligned_cols=100  Identities=19%  Similarity=0.190  Sum_probs=62.3

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      +..++.++++||=+|+| .|..++.+++.....+|++++.+++..+.+++    ++...+-...   .+...    ...+
T Consensus        25 ~~l~~~~~~~vLDiG~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~---~d~~~----~~~~   96 (187)
T PRK08287         25 SKLELHRAKHLIDVGAG-TGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIP---GEAPI----ELPG   96 (187)
T ss_pred             HhcCCCCCCEEEEECCc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEe---cCchh----hcCc
Confidence            45567789999999875 25556666665532389999999987776643    4433221111   11111    1124


Q ss_pred             CccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          263 GADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       263 ~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .+|+|+.....   ...+..+.+.|+++ |+++...
T Consensus        97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~  131 (187)
T PRK08287         97 KADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF  131 (187)
T ss_pred             CCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence            79999864321   23567788999997 9987753

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.36  E-value=0.24  Score=43.89  Aligned_cols=78  Identities=22%  Similarity=0.378  Sum_probs=48.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHHH----hCCCce-Ee--CCCCCCccHHHHHHHHhc--C
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRITD--G  262 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~~----~~G~~~-~~--~~~~~~~~~~~~~~~~~~--~  262 (353)
                      ++++||+|+ |.+|..++..+...|+ +|+.+ +++.++.+.+.    ..+... ++  |..+ ...+.+.+.....  +
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            578999998 8999999988888899 78777 88776654332    222211 22  2221 2223232332221  3


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (247)
T PRK05565         83 KIDILVNNAGI   93 (247)
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>PRK05855 short chain dehydrogenase; Validated

Probab=94.35  E-value=0.2  Score=50.51  Aligned_cols=79  Identities=20%  Similarity=0.350  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .+.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+    ++.|... .  .|..+ .....+.+.+..  .+
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g  391 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG  391 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence            4678999998 9999999999999999 899999988776543    3334322 1  23321 222333333322  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++|+++|.
T Consensus       392 ~id~lv~~Ag~  402 (582)
T PRK05855        392 VPDIVVNNAGI  402 (582)
T ss_pred             CCcEEEECCcc
Confidence            79999999875

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.34  E-value=0.19  Score=45.75  Aligned_cols=104  Identities=14%  Similarity=0.163  Sum_probs=65.4

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc-eEeCCCCCCccHHHHHHHHhcCCc
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      ....++.++.+||-+|+| .|..+..+++..++ +|++++.+++-.+.+++.-.. ..+...  ..++.+  ....++.|
T Consensus        45 l~~l~l~~~~~VLDiGcG-~G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~--~~D~~~--~~~~~~~F  118 (263)
T PTZ00098         45 LSDIELNENSKVLDIGSG-LGGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFE--ANDILK--KDFPENTF  118 (263)
T ss_pred             HHhCCCCCCCEEEEEcCC-CChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEE--ECCccc--CCCCCCCe
Confidence            356788999999999875 35555666776787 999999999888877663211 111000  011110  01112379


Q ss_pred             cEEEecc-----C---ChHHHHHHHHHhccCCceEEEEcC
Q 018627          265 DYSFECI-----G---DTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       265 dvv~d~~-----g---~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      |+|+..-     +   ....+..+.+.|+|+ |+++....
T Consensus       119 D~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~  157 (263)
T PTZ00098        119 DMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY  157 (263)
T ss_pred             EEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            9998621     1   124567778999997 99998754

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=94.33  E-value=0.45  Score=42.62  Aligned_cols=106  Identities=22%  Similarity=0.253  Sum_probs=72.5

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      ...++.+|++|+=.|.| .|.+++.+|++.|. .+|+..+..++.++.++    ++|....+...  ..|..+.+   ..
T Consensus        88 ~~~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~~Dv~~~~---~~  161 (256)
T COG2519          88 ARLGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--LGDVREGI---DE  161 (256)
T ss_pred             HHcCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--eccccccc---cc
Confidence            46789999999877654 57888888888765 69999999999888774    35655432222  12222111   12


Q ss_pred             CCccEEEeccCC-hHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          262 GGADYSFECIGD-TGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       262 ~~~dvv~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      ..+|.+|=-... -..++.+.+.|+++ |.++.+-....
T Consensus       162 ~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~ve  199 (256)
T COG2519         162 EDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPTVE  199 (256)
T ss_pred             cccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCCHH
Confidence            278877655544 35688899999997 99999965443

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=94.32  E-value=0.29  Score=45.07  Aligned_cols=76  Identities=16%  Similarity=0.197  Sum_probs=45.6

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CC---ceE-eCCCCCCccHHHHHHHHhcC-Ccc
Q 018627          197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GV---TEF-LNPNDNNEPVQQVIKRITDG-GAD  265 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~---~~~-~~~~~~~~~~~~~~~~~~~~-~~d  265 (353)
                      |||+|+ |.+|..+++-+...+.++++.+++++.++-.++. +    ..   ... ...-. +-.-.+.+...... ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vig-Dvrd~~~l~~~~~~~~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIG-DVRDKERLNRIFEEYKPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CT-SCCHHHHHHHHTT--T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceee-cccCHHHHHHHHhhcCCC
Confidence            799987 8999999988888888899999999988776633 4    21   111 11110 12224456665555 899


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      +||.++.-
T Consensus        80 iVfHaAA~   87 (293)
T PF02719_consen   80 IVFHAAAL   87 (293)
T ss_dssp             EEEE----
T ss_pred             EEEEChhc
Confidence            99998764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.29  E-value=0.39  Score=43.71  Aligned_cols=79  Identities=20%  Similarity=0.269  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      +.+++||+|+ |.+|..+++.+...|+ +|+++.++.++.+.+    +..+... .+  |..+ ...+.+.+.+..  -+
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence            4568999998 8999999999988999 888887877655433    2234322 11  2221 222333333221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|.++|.
T Consensus        87 ~id~vi~~Ag~   97 (274)
T PRK07775         87 EIEVLVSGAGD   97 (274)
T ss_pred             CCCEEEECCCc
Confidence            78999999874

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=94.28  E-value=0.2  Score=42.79  Aligned_cols=77  Identities=23%  Similarity=0.297  Sum_probs=45.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-------hhHHHHHhCCCceEe---CCCCCCccHHHHHHHHhc--C
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-------EKCEKAKAFGVTEFL---NPNDNNEPVQQVIKRITD--G  262 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-------~~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~--~  262 (353)
                      ++||+|+ |++|+.+++.+...+..+++.+.++.       +..+.+++.|+.-.+   |.. +..++.+.+.....  +
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~-d~~~v~~~~~~~~~~~~   80 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVT-DPEAVAAALAQLRQRFG   80 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TT-SHHHHHHHHHTSHTTSS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCcc-CHHHHHHHHHHHHhccC
Confidence            6899987 99999999999999888999998882       234455666764322   222 12333333333322  3


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      +++.||.+.|.
T Consensus        81 ~i~gVih~ag~   91 (181)
T PF08659_consen   81 PIDGVIHAAGV   91 (181)
T ss_dssp             -EEEEEE----
T ss_pred             Ccceeeeeeee
Confidence            77889988775

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.28  E-value=0.23  Score=47.77  Aligned_cols=35  Identities=26%  Similarity=0.310  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      .+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56789999999999999999999999999999887

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=94.27  E-value=0.48  Score=42.78  Aligned_cols=99  Identities=18%  Similarity=0.201  Sum_probs=64.9

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC-ceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-TEFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      ....+.++++||-+|+| .|..+..+++.....+|++++.++.-++.+++.-. ..++..     +... .  ...+.+|
T Consensus        25 ~~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~-----d~~~-~--~~~~~fD   95 (258)
T PRK01683         25 ARVPLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA-----DIAS-W--QPPQALD   95 (258)
T ss_pred             hhCCCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC-----chhc-c--CCCCCcc
Confidence            44567788999999875 45666777777643499999999998888866421 122211     1111 1  1123799


Q ss_pred             EEEeccCC------hHHHHHHHHHhccCCceEEEEc
Q 018627          266 YSFECIGD------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       266 vv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +|+....-      ...+....+.|+++ |+++...
T Consensus        96 ~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~  130 (258)
T PRK01683         96 LIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM  130 (258)
T ss_pred             EEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence            99865431      24577788899997 9988753

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=94.26  E-value=0.29  Score=44.04  Aligned_cols=79  Identities=20%  Similarity=0.162  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhhHH----HHHhCCCce-E--eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~-~~~~~----~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+.+.++ ++..+    .+++.+... .  .|..+ .....+.+....  .
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~   83 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF   83 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence            5789999987 8999999999999999 67666553 33322    223334322 1  23331 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|+++.+.|.
T Consensus        84 g~id~lv~~ag~   95 (261)
T PRK08936         84 GTLDVMINNAGI   95 (261)
T ss_pred             CCCCEEEECCCC
Confidence            379999999884

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=94.26  E-value=0.18  Score=39.29  Aligned_cols=95  Identities=23%  Similarity=0.291  Sum_probs=57.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc-eEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~-~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      |.+||-.|+| .|..++.+++.. ..++++++.++...+.++.    .+.. .+-..   ..++.+.......+.+|+|+
T Consensus         1 g~~vlD~~~G-~G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~D~Iv   75 (117)
T PF13659_consen    1 GDRVLDPGCG-SGTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVI---VGDARDLPEPLPDGKFDLIV   75 (117)
T ss_dssp             TEEEEEETST-TCHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEE---ESHHHHHHHTCTTT-EEEEE
T ss_pred             CCEEEEcCcc-hHHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEE---ECchhhchhhccCceeEEEE
Confidence            5678887653 344444455544 4499999999998887755    3331 11111   23444444334455999998


Q ss_pred             eccCC--------------hHHHHHHHHHhccCCceEEEE
Q 018627          269 ECIGD--------------TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       269 d~~g~--------------~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      -+-.-              ...++.+.+.|+++ |.++.+
T Consensus        76 ~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~  114 (117)
T PF13659_consen   76 TNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI  114 (117)
T ss_dssp             E--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence            75432              13477888999997 998876

...

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.26  E-value=0.51  Score=44.36  Aligned_cols=95  Identities=18%  Similarity=0.170  Sum_probs=63.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE------eCC-CCCCccHHHHHHHHhcCCccE
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF------LNP-NDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~------~~~-~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      ..+|.|+|+|.+|.+.+..+...|. .|.+.++++++.+.+++.+....      +.. .....+..+.+     +..|+
T Consensus         4 ~m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~   77 (328)
T PRK14618          4 GMRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADF   77 (328)
T ss_pred             CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCE
Confidence            3479999999999999999988898 89999999888777765421100      000 00011222222     25899


Q ss_pred             EEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          267 SFECIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       267 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      |+-++... .+...++.++++ -.++.+..
T Consensus        78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence            99999875 467777888875 66666644

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=94.25  E-value=0.74  Score=40.07  Aligned_cols=98  Identities=18%  Similarity=0.180  Sum_probs=63.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh-cCCccEE
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT-DGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~-~~~~dvv  267 (353)
                      ++.+||-+|+| .|..+..+++.....+|++++.+++.++.+++    .+...+...   ..+..+.+.... ++.+|.|
T Consensus        40 ~~~~VLDiGcG-tG~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~---~~d~~~~l~~~~~~~~~D~V  115 (202)
T PRK00121         40 DAPIHLEIGFG-KGEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLL---CGDAVEVLLDMFPDGSLDRI  115 (202)
T ss_pred             CCCeEEEEccC-CCHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEE---ecCHHHHHHHHcCccccceE
Confidence            67889889886 46667777776543489999999998887754    233222111   122322333222 3479988


Q ss_pred             EeccC--------------ChHHHHHHHHHhccCCceEEEEc
Q 018627          268 FECIG--------------DTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       268 ~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +-...              ....+..+.+.|+++ |.++...
T Consensus       116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            76432              134678888999997 9998874

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=94.24  E-value=0.96  Score=41.18  Aligned_cols=103  Identities=16%  Similarity=0.134  Sum_probs=62.8

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ..++++|++||-.|+|+ |..++.++..++ ...|++++.++++++.++    ..|...+....   .+.. .+.. ..+
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~---~D~~-~~~~-~~~  139 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTN---FDGR-VFGA-AVP  139 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEec---CCHH-Hhhh-hcc
Confidence            34678999999987642 333444454442 238999999999987663    46765432222   1111 1111 123


Q ss_pred             CccEEEe---ccCC-------------------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627          263 GADYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       263 ~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .||+|+-   |+|.                         ...+..+++.++++ |++|-...+
T Consensus       140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstcs  201 (264)
T TIGR00446       140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTCS  201 (264)
T ss_pred             CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeCC
Confidence            6998874   4442                         13677888899997 999866544

>PRK06849 hypothetical protein; Provisional

Probab=94.24  E-value=0.42  Score=46.09  Aligned_cols=96  Identities=16%  Similarity=0.113  Sum_probs=61.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--EeC-CCCCCccHHHHHHHHhcC-CccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLN-PNDNNEPVQQVIKRITDG-GADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~~~-~~~~~~~~~~~~~~~~~~-~~dvv  267 (353)
                      ...+|||+|+ .+.|+.+++.+...|. +|+++++++.......+ .++.  .+. ...+...+.+.+.++... ++|++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence            4588999998 5699999999999999 99999887654432211 1222  221 222234567777776655 89999


Q ss_pred             EeccCChHHHHHHHHHhccCCceE
Q 018627          268 FECIGDTGMITTALQSCCDGWGLA  291 (353)
Q Consensus       268 ~d~~g~~~~~~~~~~~l~~~~G~~  291 (353)
                      +-+......+......+.+. .++
T Consensus        81 IP~~e~~~~~a~~~~~l~~~-~~v  103 (389)
T PRK06849         81 IPTCEEVFYLSHAKEELSAY-CEV  103 (389)
T ss_pred             EECChHHHhHHhhhhhhcCC-cEE
Confidence            98765432233334456553 443

>PRK08328 hypothetical protein; Provisional

Probab=94.23  E-value=0.34  Score=43.20  Aligned_cols=36  Identities=33%  Similarity=0.497  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .+.+|+|+|+|++|..++..+...|.++++.+|.+.
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~   61 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT   61 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            457899999999999999999999999999997553

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.19  E-value=0.28  Score=43.89  Aligned_cols=77  Identities=21%  Similarity=0.289  Sum_probs=46.9

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhH----HHHHhCCCc-eE--eCCCCCCccHHHHHHHHhc--CC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKC----EKAKAFGVT-EF--LNPNDNNEPVQQVIKRITD--GG  263 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~----~~~~~~G~~-~~--~~~~~~~~~~~~~~~~~~~--~~  263 (353)
                      +++||+|+ |++|..++..+...|+ +|++++++. ++.    +.+++.+.. .+  .|..+ ..++.+.+.....  +.
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   80 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR   80 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence            57899998 9999999999999999 888887653 222    222333332 12  23321 2233333333221  37


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.+.|.
T Consensus        81 id~vi~~ag~   90 (256)
T PRK12745         81 IDCLVNNAGV   90 (256)
T ss_pred             CCEEEECCcc
Confidence            8999999874

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.17  E-value=0.63  Score=44.50  Aligned_cols=94  Identities=16%  Similarity=0.216  Sum_probs=62.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHC--CCCeEEEE--cCChhhHH-HHHhCCCceEeCCCCCCccHHHHH------------
Q 018627          195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGV--DTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVI------------  256 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~--g~~~vi~~--~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~------------  256 (353)
                      ++|.|+|+ |++|..++.+++..  .+ +|++.  +++.++++ .+++++...+...+   +...+.+            
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~---~~~~~~l~~~l~~~~~~v~   77 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVAD---EEAAKELKEALAAAGIEVL   77 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHhhccCCceEE
Confidence            57899997 88999999988765  45 66666  34444433 45778877765543   1112222            


Q ss_pred             ------HHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEE
Q 018627          257 ------KRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVT  293 (353)
Q Consensus       257 ------~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~  293 (353)
                            .++... .+|+|+.++++...+...+..++.+ -++.+
T Consensus        78 ~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL  120 (385)
T PRK05447         78 AGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL  120 (385)
T ss_pred             EChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence                  222222 6899999998877788888899874 55554

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.16  E-value=0.35  Score=44.97  Aligned_cols=79  Identities=19%  Similarity=0.292  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhH----HHHHhCCCceEe---CCCCCCccHHHHHHHHh-cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKC----EKAKAFGVTEFL---NPNDNNEPVQQVIKRIT-DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~----~~~~~~G~~~~~---~~~~~~~~~~~~~~~~~-~~  262 (353)
                      .|+++||+|+ +++|...++.+...|+ +|++.+++. ++.    +.+++.|.....   |..+ .+...+.+.... -+
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g   88 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG   88 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence            5789999998 8999999999999999 788876542 222    223334433221   2221 112222222111 24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++|+++|.
T Consensus        89 ~iD~li~nAG~   99 (306)
T PRK07792         89 GLDIVVNNAGI   99 (306)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK14982 acyl-ACP reductase; Provisional

Probab=94.15  E-value=0.23  Score=46.89  Aligned_cols=94  Identities=19%  Similarity=0.240  Sum_probs=61.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      -.+++|+|+|+ |.+|..+++.+.. .|.++++.+.+++++++.+.+ ++...       ..++.+.+     ...|+|+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~-------i~~l~~~l-----~~aDiVv  220 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGK-------ILSLEEAL-----PEADIVV  220 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcccc-------HHhHHHHH-----ccCCEEE
Confidence            46789999998 8999999888864 476689999998887776543 32111       11122222     2589999


Q ss_pred             eccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          269 ECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       269 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .+++.+..+..-...++++ -.+++++.+.
T Consensus       221 ~~ts~~~~~~I~~~~l~~~-~~viDiAvPR  249 (340)
T PRK14982        221 WVASMPKGVEIDPETLKKP-CLMIDGGYPK  249 (340)
T ss_pred             ECCcCCcCCcCCHHHhCCC-eEEEEecCCC
Confidence            9988644421222455775 7778887653

>PLN02256 arogenate dehydrogenase

Probab=94.14  E-value=0.56  Score=43.67  Aligned_cols=93  Identities=17%  Similarity=0.192  Sum_probs=59.8

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      ..-..+.+|.|+|.|.+|.+.+..++..|. +|+++++++. .+.++++|+..   +    .+..+.+    ....|+||
T Consensus        31 ~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~----~~~~e~~----~~~aDvVi   97 (304)
T PLN02256         31 LEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---F----RDPDDFC----EEHPDVVL   97 (304)
T ss_pred             hccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---e----CCHHHHh----hCCCCEEE
Confidence            344456789999999999999999888887 8999988864 35566677532   1    1122211    12478888


Q ss_pred             eccCChHHHHHHHHH-----hccCCceEEEEcC
Q 018627          269 ECIGDTGMITTALQS-----CCDGWGLAVTLGV  296 (353)
Q Consensus       269 d~~g~~~~~~~~~~~-----l~~~~G~~v~~g~  296 (353)
                      -|+... .+...++.     ++++ ..++.++.
T Consensus        98 lavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256         98 LCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             EecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence            888753 33333332     3454 66777766

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.14  E-value=0.32  Score=43.94  Aligned_cols=79  Identities=19%  Similarity=0.336  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCC---hhhHHHH-HhCCCceE--eCCCCCCccHHHHHHHHhc--
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTN---PEKCEKA-KAFGVTEF--LNPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~---~~~~~~~-~~~G~~~~--~~~~~~~~~~~~~~~~~~~--  261 (353)
                      .++++||+|+   +++|+++++.+...|+ +|+.+.+.   +++++.+ ++++....  .|.. +.++..+.+.....  
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVA-SDEQIDALFASLGQHW   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCC-CHHHHHHHHHHHHHHh
Confidence            5789999984   5899999999988999 78776443   3343333 33453222  2322 13334444433322  


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|+++++.|.
T Consensus        83 g~iD~lvnnAG~   94 (260)
T PRK06997         83 DGLDGLVHSIGF   94 (260)
T ss_pred             CCCcEEEEcccc
Confidence            479999998874

>PRK00536 speE spermidine synthase; Provisional

Probab=94.12  E-value=0.2  Score=45.55  Aligned_cols=100  Identities=12%  Similarity=-0.064  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEE-e
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSF-E  269 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~-d  269 (353)
                      ...++|||+|+| =|.++-.++|.-  ++|+.++.+++-.+..++ +..-.- ..++....+...+.+...+.||+|+ |
T Consensus        71 ~~pk~VLIiGGG-DGg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~-~~~DpRv~l~~~~~~~~~~~fDVIIvD  146 (262)
T PRK00536         71 KELKEVLIVDGF-DLELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHE-VKNNKNFTHAKQLLDLDIKKYDLIICL  146 (262)
T ss_pred             CCCCeEEEEcCC-chHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHH-hhcCCCEEEeehhhhccCCcCCEEEEc
Confidence            455999999764 245555777775  389999999999988888 321100 0111111111123332335899765 4


Q ss_pred             ccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          270 CIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       270 ~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +.-.++..+...++|+++ |.+|.-..
T Consensus       147 s~~~~~fy~~~~~~L~~~-Gi~v~Qs~  172 (262)
T PRK00536        147 QEPDIHKIDGLKRMLKED-GVFISVAK  172 (262)
T ss_pred             CCCChHHHHHHHHhcCCC-cEEEECCC
Confidence            455567778888999997 99887643

>PRK04457 spermidine synthase; Provisional

Probab=94.08  E-value=1.2  Score=40.59  Aligned_cols=96  Identities=15%  Similarity=0.149  Sum_probs=63.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CCc----eEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVT----EFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~~----~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      .++++||++|+| .|..+..+++.....++++++.+++-.+.+++. +..    .+-..   ..+..+.+.. ..+.+|+
T Consensus        65 ~~~~~vL~IG~G-~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~-~~~~yD~  139 (262)
T PRK04457         65 PRPQHILQIGLG-GGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAV-HRHSTDV  139 (262)
T ss_pred             CCCCEEEEECCC-HhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHh-CCCCCCE
Confidence            456889999876 366777777776444899999999999998773 321    11111   1234444443 2347998


Q ss_pred             EEe-ccC-C--------hHHHHHHHHHhccCCceEEE
Q 018627          267 SFE-CIG-D--------TGMITTALQSCCDGWGLAVT  293 (353)
Q Consensus       267 v~d-~~g-~--------~~~~~~~~~~l~~~~G~~v~  293 (353)
                      |+- ... .        .+.++.+.+.|+++ |.++.
T Consensus       140 I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi  175 (262)
T PRK04457        140 ILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV  175 (262)
T ss_pred             EEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence            873 211 1        36678888999997 99886

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.07  E-value=0.27  Score=44.38  Aligned_cols=79  Identities=20%  Similarity=0.348  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHHHH-HhCCCce-E--eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~~~-~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+   +++|.++++.+...|+ +|+.++++.  +..+.+ ++++... .  .|..+ ..+..+.+.+..  .
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~   83 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV   83 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence            5789999985   6899999999888999 888887653  333333 3344211 1  23221 223333333322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        84 g~iD~li~nAG~   95 (256)
T PRK07889         84 DGLDGVVHSIGF   95 (256)
T ss_pred             CCCcEEEEcccc
Confidence            479999998874

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=94.06  E-value=0.74  Score=42.34  Aligned_cols=97  Identities=16%  Similarity=0.151  Sum_probs=63.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CCceEe--CCCC--CCccHHHHHHHHhcCCccEEEe
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFL--NPND--NNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~~~~~--~~~~--~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      ++|||+|+| -|-.+-.+++....++++.++.+++=.+.++++ +-...-  +.+-  ...+-.+.+++. ..+||+|+-
T Consensus        78 k~VLiiGgG-dG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~-~~~fDvIi~  155 (282)
T COG0421          78 KRVLIIGGG-DGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDC-EEKFDVIIV  155 (282)
T ss_pred             CeEEEECCC-ccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhC-CCcCCEEEE
Confidence            699999764 455566788888788999999999999999883 211100  0000  012334445543 237997765


Q ss_pred             -ccCC---------hHHHHHHHHHhccCCceEEEE
Q 018627          270 -CIGD---------TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       270 -~~g~---------~~~~~~~~~~l~~~~G~~v~~  294 (353)
                       +...         .+.++...++|+++ |.++.-
T Consensus       156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q  189 (282)
T COG0421         156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ  189 (282)
T ss_pred             cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence             3322         45678888999997 988876

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=94.05  E-value=0.32  Score=41.60  Aligned_cols=94  Identities=17%  Similarity=0.146  Sum_probs=56.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      ++++||-+|+| .|..++.+++.....+|++++.+++..+.+    ++.+...+...   ..+..+ +  ...+.||+|+
T Consensus        42 ~~~~vLDiGcG-tG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i---~~d~~~-~--~~~~~fD~I~  114 (181)
T TIGR00138        42 DGKKVIDIGSG-AGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIV---NGRAED-F--QHEEQFDVIT  114 (181)
T ss_pred             CCCeEEEecCC-CCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEE---ecchhh-c--cccCCccEEE
Confidence            38899999874 344444555544333899999999866554    33554332111   112221 1  1134899888


Q ss_pred             eccC--ChHHHHHHHHHhccCCceEEEE
Q 018627          269 ECIG--DTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       269 d~~g--~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      -..-  -+..++.+.+.++++ |+++..
T Consensus       115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       115 SRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            6531  134556677889997 998876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.04  E-value=0.46  Score=42.24  Aligned_cols=36  Identities=28%  Similarity=0.400  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ...+|+|.|+|++|..++..+...|.++++.+|.+.
T Consensus        20 ~~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~   55 (228)
T cd00757          20 KNARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV   55 (228)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence            357899999999999999999999999998885543

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=94.00  E-value=0.18  Score=45.72  Aligned_cols=73  Identities=16%  Similarity=0.119  Sum_probs=52.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~  273 (353)
                      +|||.|+++-|..++..+...|. +|+++.+++...+.+.+.|...++.-.   .+-. .+.++..+ ++|+|+|++..
T Consensus         2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~---l~~~-~l~~~l~~~~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGA---LDPQ-ELREFLKRHSIDILVDATHP   75 (256)
T ss_pred             eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECC---CCHH-HHHHHHHhcCCCEEEEcCCH
Confidence            69999995569999988888898 898888888888788777766655322   1222 24344334 89999998763

This enzyme was found to be a monomer by gel filtration.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=93.98  E-value=0.45  Score=44.39  Aligned_cols=78  Identities=24%  Similarity=0.285  Sum_probs=50.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHH-HhCCC---c-eE--eCCCCCCccHHHHHHHHh--cC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA-KAFGV---T-EF--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~-~~~G~---~-~~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      ++++||+|+ +++|.+++..+...| + +|+.+.+++++.+.+ +++..   . ..  .|..+ ..+....+.+..  .+
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence            578999998 899999999888889 7 888888888776544 33321   1 11  23321 222333333321  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|.++|.
T Consensus        81 ~iD~lI~nAG~   91 (314)
T TIGR01289        81 PLDALVCNAAV   91 (314)
T ss_pred             CCCEEEECCCc
Confidence            79999998873

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=93.97  E-value=0.37  Score=44.28  Aligned_cols=130  Identities=17%  Similarity=0.160  Sum_probs=84.0

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC---------CCccHHHHHHH
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND---------NNEPVQQVIKR  258 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~---------~~~~~~~~~~~  258 (353)
                      .+...++..+|+.|.|..|+.++..++.+|+ .|...+....+.+..+.+|+...-..++         -.++|..+-.+
T Consensus       158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~  236 (356)
T COG3288         158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE  236 (356)
T ss_pred             hcccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHH
Confidence            3345567889999999999999999999999 8998888888888888788765322111         01123332223


Q ss_pred             Hhc---CCccEEEeccCC-----hHH-HHHHHHHhccCCceEEEEcCCCCCCceec-chhhh-h-cCcEEEeee
Q 018627          259 ITD---GGADYSFECIGD-----TGM-ITTALQSCCDGWGLAVTLGVPKLKPEVAA-HYGLF-L-SGRTLKGSL  320 (353)
Q Consensus       259 ~~~---~~~dvv~d~~g~-----~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~-~-~~~~i~g~~  320 (353)
                      +..   .++|+||-+.=-     |.+ .......|+|+ ..+|++....+ ....+ .+... . ++++|+|-.
T Consensus       237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~G-GNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETG-GNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcC-CCcccccCCeEEEeCCeEEEeec
Confidence            222   289999987532     222 45666899997 99998876444 12121 12222 2 377887764

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=93.94  E-value=0.33  Score=40.42  Aligned_cols=84  Identities=12%  Similarity=0.171  Sum_probs=55.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc-------eEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-------EFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~-------~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      +|.|+|+|..|.+++..+...|. +|....++++..+.+++-+..       ..-..-....++.+.++     +.|+++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII   74 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence            57899999999999999999997 999999999888877653221       00000000123444443     589999


Q ss_pred             eccCChHHHHHHHHHhcc
Q 018627          269 ECIGDTGMITTALQSCCD  286 (353)
Q Consensus       269 d~~g~~~~~~~~~~~l~~  286 (353)
                      -++.. ..++..++.+++
T Consensus        75 iavPs-~~~~~~~~~l~~   91 (157)
T PF01210_consen   75 IAVPS-QAHREVLEQLAP   91 (157)
T ss_dssp             E-S-G-GGHHHHHHHHTT
T ss_pred             ecccH-HHHHHHHHHHhh
Confidence            99886 456677776666

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=93.94  E-value=0.26  Score=43.61  Aligned_cols=70  Identities=17%  Similarity=0.297  Sum_probs=49.1

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh--hHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      |+|.|+ |.+|..+++.+...+. +|.+..|+..  ..+.+++.|+.-+. .+   .+-.+.+.+... ++|.||.+++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~-~d---~~~~~~l~~al~-g~d~v~~~~~   73 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVE-AD---YDDPESLVAALK-GVDAVFSVTP   73 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEE-S----TT-HHHHHHHHT-TCSEEEEESS
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEee-cc---cCCHHHHHHHHc-CCceEEeecC
Confidence            789998 9999999999999888 7888777753  45667888986542 21   111233333222 7999999888

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=93.93  E-value=0.45  Score=40.46  Aligned_cols=33  Identities=27%  Similarity=0.276  Sum_probs=29.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +|+|.|+|++|...++.+...|.++++.+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999999999998899998775

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=93.89  E-value=2.5  Score=39.02  Aligned_cols=58  Identities=26%  Similarity=0.390  Sum_probs=43.3

Q ss_pred             HhccCCCCCEEEEEc-CChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCC
Q 018627          187 NVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       187 ~~~~~~~g~~vLV~G-ag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +...+++|++| |=+ +|.+|.+++.+|+.+|++-+++.  .-+.+|.++++.+|+.-+...
T Consensus        55 ~~G~l~pG~tI-VE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~  115 (300)
T COG0031          55 KRGLLKPGGTI-VEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTP  115 (300)
T ss_pred             HcCCCCCCCEE-EEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcC
Confidence            44569999954 545 48899999999999999444444  346688899999998766543

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=93.87  E-value=0.38  Score=42.73  Aligned_cols=79  Identities=15%  Similarity=0.242  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHH----HHhCCCce-Ee--CCCCCCccHHHHHHHHhc--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~----~~~~G~~~-~~--~~~~~~~~~~~~~~~~~~--  261 (353)
                      .++++||+|+ |++|..++..+...|+ +|+++. +++++.+.    +++.+... .+  |..+ ...+.+.+.+...  
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   82 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSK-VEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4789999997 8999999998888999 676653 34444332    22334322 12  2221 2233333333222  


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|++|.++|.
T Consensus        83 ~~id~vi~~ag~   94 (247)
T PRK12935         83 GKVDILVNNAGI   94 (247)
T ss_pred             CCCCEEEECCCC
Confidence            368999999875

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=93.87  E-value=0.9  Score=41.77  Aligned_cols=89  Identities=20%  Similarity=0.306  Sum_probs=63.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh-HHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~-~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +|-++|-|.+|.-+++-+...|. .+.+.++++++ .+.+++.|+...-       +..+.+.     ..|+||-+++.+
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~-------s~~eaa~-----~aDvVitmv~~~   68 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAA-------SPAEAAA-----EADVVITMLPDD   68 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccC-------CHHHHHH-----hCCEEEEecCCH
Confidence            57788999999999999999999 99999999999 8888888876432       1223332     378888888775


Q ss_pred             HHHHHHH-------HHhccCCceEEEEcCCC
Q 018627          275 GMITTAL-------QSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       275 ~~~~~~~-------~~l~~~~G~~v~~g~~~  298 (353)
                      ...+..+       ..++++ ..+|++....
T Consensus        69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis   98 (286)
T COG2084          69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTIS   98 (286)
T ss_pred             HHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence            5544433       234454 6666665543

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=93.87  E-value=0.36  Score=49.62  Aligned_cols=77  Identities=21%  Similarity=0.388  Sum_probs=57.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      .++|+|.|.|.+|+.+++.++..|. .+++++.++++.+.+++.|...++ -+   ..-.+.+++.--+.+|.++-+++.
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GD---at~~~~L~~agi~~A~~vvv~~~d  474 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GD---ATRMDLLESAGAAKAEVLINAIDD  474 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-Ee---CCCHHHHHhcCCCcCCEEEEEeCC
Confidence            3679999999999999999999999 899999999999999998865332 11   112234443322378999988887


Q ss_pred             hH
Q 018627          274 TG  275 (353)
Q Consensus       274 ~~  275 (353)
                      ++
T Consensus       475 ~~  476 (621)
T PRK03562        475 PQ  476 (621)
T ss_pred             HH
Confidence            44

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=93.85  E-value=0.33  Score=45.23  Aligned_cols=38  Identities=16%  Similarity=0.161  Sum_probs=31.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC  231 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~  231 (353)
                      .|++|||+|+ |.+|..++..+...|. +|+++.++.++.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~   42 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR   42 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence            4789999998 9999999998888899 888776766543

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=93.78  E-value=0.85  Score=42.92  Aligned_cols=97  Identities=16%  Similarity=0.142  Sum_probs=63.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHH-HCCCCeEEEEcCChhhHHHHH-hC----CCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAK-AF----GVTEFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~-~~g~~~vi~~~~~~~~~~~~~-~~----G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      .+..++++|+|+|..+.+.+..+. ..++++|.+..++.++.+.+. ++    |.. +...    .+..+.++     ..
T Consensus       126 ~~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av~-----~a  195 (326)
T TIGR02992       126 REDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAMS-----GA  195 (326)
T ss_pred             CCCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHhc-----cC
Confidence            345678999999999988877775 578778999999998877553 22    432 2211    22333332     59


Q ss_pred             cEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      |+|+.|++....+- ..+.++++ -++..+|....
T Consensus       196 DiVvtaT~s~~p~i-~~~~l~~g-~~i~~vg~~~p  228 (326)
T TIGR02992       196 DIIVTTTPSETPIL-HAEWLEPG-QHVTAMGSDAE  228 (326)
T ss_pred             CEEEEecCCCCcEe-cHHHcCCC-cEEEeeCCCCC
Confidence            99999987643321 12457885 67777886543

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=93.78  E-value=0.71  Score=43.16  Aligned_cols=87  Identities=21%  Similarity=0.258  Sum_probs=59.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -.|++|.|+|-|.+|.+.++.++..|. +|++..+.....+.+++.|+. +       .++.+.++     ..|+|+-++
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v-------~sl~Eaak-----~ADVV~llL   79 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-V-------MSVSEAVR-----TAQVVQMLL   79 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-E-------CCHHHHHh-----cCCEEEEeC
Confidence            368999999999999999999999999 887776655555666666753 1       12333333     489999988


Q ss_pred             CChHH---H-HHHHHHhccCCceEEEE
Q 018627          272 GDTGM---I-TTALQSCCDGWGLAVTL  294 (353)
Q Consensus       272 g~~~~---~-~~~~~~l~~~~G~~v~~  294 (353)
                      ..+..   + ...+..++++  .++.+
T Consensus        80 Pd~~t~~V~~~eil~~MK~G--aiL~f  104 (335)
T PRK13403         80 PDEQQAHVYKAEVEENLREG--QMLLF  104 (335)
T ss_pred             CChHHHHHHHHHHHhcCCCC--CEEEE
Confidence            75332   2 2344566764  44444

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=93.76  E-value=0.93  Score=44.44  Aligned_cols=105  Identities=13%  Similarity=0.141  Sum_probs=64.4

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ..++++|++||=.|+| .|..+++++..+ +..+|+++|.++++++.++    ++|...+....   .+.. .+.....+
T Consensus       232 ~l~~~~g~~VLD~cag-pGgkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~---~Da~-~l~~~~~~  306 (431)
T PRK14903        232 LMELEPGLRVLDTCAA-PGGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKI---ADAE-RLTEYVQD  306 (431)
T ss_pred             HhCCCCCCEEEEeCCC-ccHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEE---Cchh-hhhhhhhc
Confidence            4578899999998764 233444555555 2238999999999988774    46765421111   1111 11112234


Q ss_pred             CccEEEe---ccCC-------------------------hHHHHHHHHHhccCCceEEEEcCCC
Q 018627          263 GADYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       263 ~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .||.|+-   |+|.                         ...+..+++.++++ |+++..-.+-
T Consensus       307 ~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs~  369 (431)
T PRK14903        307 TFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCTV  369 (431)
T ss_pred             cCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECCC
Confidence            7998874   4432                         12366788899997 9988765543

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=93.75  E-value=0.38  Score=48.77  Aligned_cols=94  Identities=13%  Similarity=0.190  Sum_probs=63.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      ++++|.|.|.+|+.+++.++..|. .++++|.++++.+.+++.|...+.--    ..-.+.+++.--+.+|.++-++++.
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD----~~~~~~L~~a~i~~a~~viv~~~~~  492 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN----AANEEIMQLAHLDCARWLLLTIPNG  492 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC----CCCHHHHHhcCccccCEEEEEcCCh
Confidence            678999999999999999999998 89999999999999999886654421    1112334433223788888776653


Q ss_pred             HH---HHHHHHHhccCCceEEEE
Q 018627          275 GM---ITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       275 ~~---~~~~~~~l~~~~G~~v~~  294 (353)
                      ..   +-...+...+. .+++.-
T Consensus       493 ~~~~~iv~~~~~~~~~-~~iiar  514 (558)
T PRK10669        493 YEAGEIVASAREKRPD-IEIIAR  514 (558)
T ss_pred             HHHHHHHHHHHHHCCC-CeEEEE
Confidence            22   22233444444 455543

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=93.74  E-value=0.55  Score=41.72  Aligned_cols=73  Identities=23%  Similarity=0.378  Sum_probs=54.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh--CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA--FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      +++|.|+|.+|..+++.+...|. .|++++.++++.+...+  ++...+.-.    ..-.+.+++.--..+|+++-++|.
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~gd----~t~~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIGD----ATDEDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEec----CCCHHHHHhcCCCcCCEEEEeeCC
Confidence            68899999999999999999999 99999999999887433  554443322    122345555433389999988886

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=93.71  E-value=0.96  Score=39.65  Aligned_cols=100  Identities=22%  Similarity=0.247  Sum_probs=58.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh-cCCccEEE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGGADYSF  268 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~dvv~  268 (353)
                      ++++++||=+|+| .|.....+++..+. .+|++++.++..    ..-++ .++.-+-.+....+.+.+.. .+.+|+|+
T Consensus        49 ~~~~~~VLDlG~G-tG~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~~~~~~~~~i~~~~~~~~~D~V~  122 (209)
T PRK11188         49 FKPGMTVVDLGAA-PGGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDFRDELVLKALLERVGDSKVQVVM  122 (209)
T ss_pred             CCCCCEEEEEccc-CCHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCCCChHHHHHHHHHhCCCCCCEEe
Confidence            5789999999874 24444455555542 389999987621    11122 23322211223334444433 34899999


Q ss_pred             ecc-----CC------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627          269 ECI-----GD------------TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       269 d~~-----g~------------~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ...     |.            ...+..+.+.|+++ |+++..-..
T Consensus       123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~~~~  167 (209)
T PRK11188        123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVKVFQ  167 (209)
T ss_pred             cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEEec
Confidence            743     21            12467778899997 999885443

>PRK09134 short chain dehydrogenase; Provisional

Probab=93.70  E-value=0.38  Score=43.18  Aligned_cols=79  Identities=16%  Similarity=0.212  Sum_probs=47.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++.+ +.++.+.+    +..+... .+  |..+ ..++.+.+.+..  .
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~   85 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL   85 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5678999998 8999999999988999 7766544 44443322    2224321 12  3221 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|.+.|.
T Consensus        86 ~~iD~vi~~ag~   97 (258)
T PRK09134         86 GPITLLVNNASL   97 (258)
T ss_pred             CCCCEEEECCcC
Confidence            479999999874

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=93.69  E-value=0.67  Score=38.72  Aligned_cols=87  Identities=24%  Similarity=0.293  Sum_probs=54.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-hHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .+++|.|+|.|.-|.+.++-+|-.|. +|++..+..+ ..+.+++.|..        ..+..+.++     ..|+|+-.+
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~--------v~~~~eAv~-----~aDvV~~L~   68 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE--------VMSVAEAVK-----KADVVMLLL   68 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E--------CCEHHHHHH-----C-SEEEE-S
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe--------eccHHHHHh-----hCCEEEEeC
Confidence            57899999999999999999999999 6665555554 88888888864        234555555     389999887


Q ss_pred             CCh---HHH-HHHHHHhccCCceEEEEc
Q 018627          272 GDT---GMI-TTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       272 g~~---~~~-~~~~~~l~~~~G~~v~~g  295 (353)
                      ...   ..+ +.....|++  |..+.+.
T Consensus        69 PD~~q~~vy~~~I~p~l~~--G~~L~fa   94 (165)
T PF07991_consen   69 PDEVQPEVYEEEIAPNLKP--GATLVFA   94 (165)
T ss_dssp             -HHHHHHHHHHHHHHHS-T--T-EEEES
T ss_pred             ChHHHHHHHHHHHHhhCCC--CCEEEeC
Confidence            642   222 222246676  4555443

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>PLN02686 cinnamoyl-CoA reductase

Probab=93.69  E-value=0.38  Score=46.01  Aligned_cols=45  Identities=18%  Similarity=0.172  Sum_probs=35.4

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      ...+++|||+|+ |.+|..++..+...|+ +|+++.++.++.+.+++
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l~~   95 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKLRE   95 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence            345789999998 8999999999999999 88877677665544433

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=93.67  E-value=0.41  Score=42.27  Aligned_cols=77  Identities=18%  Similarity=0.257  Sum_probs=46.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH-Hh---CCCc-eE--eCCCCCCccHHHHHHHHh--cCC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KA---FGVT-EF--LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~-~~---~G~~-~~--~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      +++||+|+ |++|..++..+...|+ +|+++.+ ++++.+.. .+   .+.. ..  .|..+ ..++.+.+.+..  .+.
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence            46899997 8999999999999999 7777766 44443322 22   2211 11  23321 222333333221  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.+.|.
T Consensus        79 id~vi~~ag~   88 (242)
T TIGR01829        79 IDVLVNNAGI   88 (242)
T ss_pred             CcEEEECCCC
Confidence            8999999874

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08291 ectoine utilization protein EutC; Validated

Probab=93.66  E-value=1.1  Score=42.21  Aligned_cols=96  Identities=17%  Similarity=0.162  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHHHh-----CCCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKA-----FGVTEFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~~~-----~G~~~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      +..++++|+|+|..|.+.+..+.. .+.++|.+..+++++.+.+.+     +|.. +..+    .++.+.+.     ..|
T Consensus       130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al~-----~aD  199 (330)
T PRK08291        130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAVA-----GAD  199 (330)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHHc-----cCC
Confidence            445789999999999887776664 577789999999988776633     2432 2222    22333332     489


Q ss_pred             EEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       266 vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +|+.+++....+-.. ..++++ -++..+|....
T Consensus       200 iVi~aT~s~~p~i~~-~~l~~g-~~v~~vg~d~~  231 (330)
T PRK08291        200 IIVTTTPSEEPILKA-EWLHPG-LHVTAMGSDAE  231 (330)
T ss_pred             EEEEeeCCCCcEecH-HHcCCC-ceEEeeCCCCC
Confidence            999998764332211 347775 67888876543

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=93.64  E-value=1.7  Score=33.88  Aligned_cols=88  Identities=16%  Similarity=0.255  Sum_probs=60.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHC--CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          196 TVVIFGLGTVGLSVAQGAKAR--GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~--g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +|.|+|.|..|......++..  +. +++ ++++++++.+.+ +++|.. .+      .++.+.+..   ..+|+|+-++
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~------~~~~~ll~~---~~~D~V~I~t   70 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY------TDLEELLAD---EDVDAVIIAT   70 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE------SSHHHHHHH---TTESEEEEES
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch------hHHHHHHHh---hcCCEEEEec
Confidence            588999999998887666655  45 444 567777777654 567776 32      123333332   2699999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ......+.+..++..  |.-|.+.-
T Consensus        71 p~~~h~~~~~~~l~~--g~~v~~EK   93 (120)
T PF01408_consen   71 PPSSHAEIAKKALEA--GKHVLVEK   93 (120)
T ss_dssp             SGGGHHHHHHHHHHT--TSEEEEES
T ss_pred             CCcchHHHHHHHHHc--CCEEEEEc
Confidence            987888888888887  55666643

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK07578 short chain dehydrogenase; Provisional

Probab=93.64  E-value=1  Score=38.62  Aligned_cols=63  Identities=17%  Similarity=0.395  Sum_probs=40.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      ++||+|+ +++|..++..+... . +|++++++...          ...|..+ .+++.+.+.+.  +++|+++.+.|.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~-~vi~~~r~~~~----------~~~D~~~-~~~~~~~~~~~--~~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-H-EVITAGRSSGD----------VQVDITD-PASIRALFEKV--GKVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-C-cEEEEecCCCc----------eEecCCC-hHHHHHHHHhc--CCCCEEEECCCC
Confidence            6899987 89999888877766 6 88888776531          1123321 22333333221  378999988874

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=93.64  E-value=0.35  Score=43.04  Aligned_cols=77  Identities=22%  Similarity=0.206  Sum_probs=46.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      +++||+|+ |++|..+++.+...|+ +|+.+ .+++++.+.+    ++.+... .+  |.. +..++.+.+.+..  -++
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~   80 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVA-NEADVIAMFDAVQSAFGR   80 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccC-CHHHHHHHHHHHHHhcCC
Confidence            57999998 8999999999999999 66554 4555544332    3333322 11  222 1233333333322  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|.++|.
T Consensus        81 id~li~~ag~   90 (248)
T PRK06947         81 LDALVNNAGI   90 (248)
T ss_pred             CCEEEECCcc
Confidence            9999998873

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.62  E-value=0.46  Score=41.94  Aligned_cols=78  Identities=18%  Similarity=0.289  Sum_probs=46.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEE-EcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~-~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      +.++|||+|+ |.+|..++..+...|. +|++ +.++.+..+.+    ++.+... .+  |..+ ...+.+.+....  .
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   82 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD-KAALEAAVAAAVERF   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC-HHHHHHHHHHHHHHc
Confidence            3578999998 8999999999999999 6655 44444333322    2233221 22  2221 223333333221  1


Q ss_pred             CCccEEEeccC
Q 018627          262 GGADYSFECIG  272 (353)
Q Consensus       262 ~~~dvv~d~~g  272 (353)
                      +++|+++.++|
T Consensus        83 ~~id~vi~~ag   93 (249)
T PRK12825         83 GRIDILVNNAG   93 (249)
T ss_pred             CCCCEEEECCc
Confidence            37999999887

>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed

Probab=93.61  E-value=1  Score=44.47  Aligned_cols=102  Identities=15%  Similarity=0.125  Sum_probs=64.1

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      ++++|++||-..|++=|. ..++|..+ +-..|++.+.++.|++.+    +++|...+.....+...+    .....+.|
T Consensus       110 ~~~pg~~VLD~CAAPGgK-Tt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~----~~~~~~~f  184 (470)
T PRK11933        110 DDNAPQRVLDMAAAPGSK-TTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVF----GAALPETF  184 (470)
T ss_pred             CCCCCCEEEEeCCCccHH-HHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhh----hhhchhhc
Confidence            678999999986533232 33444444 223799999999998766    558887654332112212    22223468


Q ss_pred             cEEEe---ccCC-------------------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627          265 DYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       265 dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      |.|+-   |+|.                         ...+..+++.++++ |++|-.-.+
T Consensus       185 D~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpG-G~LVYSTCT  244 (470)
T PRK11933        185 DAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPG-GTLVYSTCT  244 (470)
T ss_pred             CeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEECCC
Confidence            86664   6654                         14567788999997 998755543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=93.61  E-value=0.5  Score=44.74  Aligned_cols=42  Identities=21%  Similarity=0.221  Sum_probs=34.4

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHH
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK  233 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~  233 (353)
                      -..+.+|||+|+ |.+|..+++.+...|. +|++++++.++.+.
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~-~V~~~~r~~~~~~~   49 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGY-TVHATLRDPAKSLH   49 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChHHHHH
Confidence            346789999997 8999999999999999 88888777665443

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=93.60  E-value=0.75  Score=40.41  Aligned_cols=75  Identities=27%  Similarity=0.350  Sum_probs=44.9

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhHH----HHHhCCCce-E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          197 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~~----~~~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      +||+|+ |.+|..++..+...|+ +|++++++. ++.+    .+++.|... .  .|..+ ...+.+.+....  -+++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGA-KVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSD-REDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence            578887 8999999999988899 788887654 3322    233345322 1  23221 222222222221  13789


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      .++.+.|.
T Consensus        79 ~vi~~ag~   86 (239)
T TIGR01830        79 ILVNNAGI   86 (239)
T ss_pred             EEEECCCC
Confidence            99998884

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.59  E-value=0.67  Score=42.56  Aligned_cols=94  Identities=19%  Similarity=0.282  Sum_probs=65.7

Q ss_pred             hhchhhhHHHHHHHHhccCC-CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          173 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       173 ~l~~~~~ta~~al~~~~~~~-~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      ..||+....+.. .+..++. .|++|+|+|- ..+|.-++.++...|+ +|+.+.+.                     ..
T Consensus       143 ~~PcTp~av~~l-l~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVtv~hs~---------------------T~  199 (287)
T PRK14176        143 LVPCTPHGVIRA-LEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNA-TVSVCHVF---------------------TD  199 (287)
T ss_pred             CCCCcHHHHHHH-HHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-EEEEEecc---------------------CC
Confidence            345443333333 3445543 7999999997 4599999999999999 88887432                     12


Q ss_pred             cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ++.+.++     .+|+++.++|.+..+..  ..++++ ..++.+|..
T Consensus       200 ~l~~~~~-----~ADIvv~AvG~p~~i~~--~~vk~g-avVIDvGin  238 (287)
T PRK14176        200 DLKKYTL-----DADILVVATGVKHLIKA--DMVKEG-AVIFDVGIT  238 (287)
T ss_pred             CHHHHHh-----hCCEEEEccCCccccCH--HHcCCC-cEEEEeccc
Confidence            3333443     38999999998776533  588986 889999974

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=93.57  E-value=0.44  Score=45.06  Aligned_cols=99  Identities=21%  Similarity=0.149  Sum_probs=62.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .++.+||-+|+|. |..+..+++..+..+++++|.+++-++.+++.....-+...  ..+..+ + ...++.||+|+.+.
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i--~gD~e~-l-p~~~~sFDvVIs~~  186 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKII--EGDAED-L-PFPTDYADRYVSAG  186 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEE--eccHHh-C-CCCCCceeEEEEcC
Confidence            4678999998864 66666777776544899999999888877663211101110  111111 1 11233799888643


Q ss_pred             C------ChHHHHHHHHHhccCCceEEEEcC
Q 018627          272 G------DTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       272 g------~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .      ....+..+.+.|+++ |+++.++.
T Consensus       187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~  216 (340)
T PLN02490        187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP  216 (340)
T ss_pred             hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            2      124577888999997 99988764

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=93.56  E-value=2.2  Score=37.75  Aligned_cols=100  Identities=12%  Similarity=0.064  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      ++.+|||+|+|.++.-=+..+...|+ +|+++...- +.+..+.+.|....+...     +.+.-  +  .++++||-++
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~r~-----~~~~d--l--~g~~LViaAT   93 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIKGN-----YDKEF--I--KDKHLIVIAT   93 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEeCC-----CChHH--h--CCCcEEEECC
Confidence            57899999999999887888888899 787774322 223333333433333211     11110  1  3689999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCce
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEV  303 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~  303 (353)
                      +.+..-.......+.. +.++.....+...++
T Consensus        94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dF  124 (223)
T PRK05562         94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLC  124 (223)
T ss_pred             CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeE
Confidence            8755434444445553 667766544333343

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=93.53  E-value=0.82  Score=40.37  Aligned_cols=47  Identities=32%  Similarity=0.427  Sum_probs=38.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh----------hhHHHHHhCC
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP----------EKCEKAKAFG  238 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~----------~~~~~~~~~G  238 (353)
                      -.|.+|+|.|-|.+|..+++.+...|.+.|.+++++.          +.++..++.+
T Consensus        21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~   77 (217)
T cd05211          21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG   77 (217)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence            3689999999999999999999999986666777777          6666665554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=93.52  E-value=0.41  Score=44.59  Aligned_cols=97  Identities=12%  Similarity=0.036  Sum_probs=57.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CCceEeCCCCCCccHHH-HHHHHhcCCccEEEeccC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVTEFLNPNDNNEPVQQ-VIKRITDGGADYSFECIG  272 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~-~~~~~~~~~~dvv~d~~g  272 (353)
                      .+|+|+|+|++|...+..+...|. .|+.+.+..++++.+++- |.. +..... ...+.. .......+.+|+||-|+-
T Consensus         3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK   79 (305)
T PRK05708          3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLYAIPAETADAAEPIHRLLLACK   79 (305)
T ss_pred             ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceeeccCCCCcccccccCEEEEECC
Confidence            369999999999888888778898 888888887787777653 432 211110 000000 000001137899999986


Q ss_pred             ChHHHHHHHH----HhccCCceEEEEcC
Q 018627          273 DTGMITTALQ----SCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~~~~~~~~~----~l~~~~G~~v~~g~  296 (353)
                      .. ....+++    .+.++ ..++.+.+
T Consensus        80 ~~-~~~~al~~l~~~l~~~-t~vv~lQN  105 (305)
T PRK05708         80 AY-DAEPAVASLAHRLAPG-AELLLLQN  105 (305)
T ss_pred             HH-hHHHHHHHHHhhCCCC-CEEEEEeC
Confidence            53 2334443    44555 66666654

>PRK07201 short chain dehydrogenase; Provisional

Probab=93.52  E-value=0.33  Score=50.11  Aligned_cols=78  Identities=28%  Similarity=0.361  Sum_probs=51.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      ++++||+|+ |++|..++..+...|+ +|+++++++++.+.+.    +.+... +  .|..+ ..++.+.+.+..  .+.
T Consensus       371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~  448 (657)
T PRK07201        371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD-SAAVDHTVKDILAEHGH  448 (657)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence            678999998 8999999999988999 8999999887765442    223222 1  23221 223333333322  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|+++.++|.
T Consensus       449 id~li~~Ag~  458 (657)
T PRK07201        449 VDYLVNNAGR  458 (657)
T ss_pred             CCEEEECCCC
Confidence            9999999884

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	353
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		3e-89
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		2e-84
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		7e-74
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		3e-70
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		3e-70
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		4e-70
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		3e-69
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		2e-67
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		3e-67
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		3e-67
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		4e-67
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		4e-67
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		5e-67
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		5e-67
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		5e-67
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		6e-67
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		1e-66
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		2e-66
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		2e-66
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-66
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		3e-66
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		1e-65
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-65
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-65
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		2e-64
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		2e-64
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		4e-64
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		2e-63
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		2e-62
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		3e-62
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		1e-59
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		3e-31
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		5e-17
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		2e-14
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		5e-14
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		3e-13
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		3e-13
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		8e-13
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		1e-12
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		4e-12
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		4e-12
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		5e-12
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		6e-12
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		6e-12
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		6e-12
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		1e-11
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		2e-11
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		5e-11
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		5e-11
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		7e-11
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		1e-10
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		6e-10
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		3e-09
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		4e-09
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		6e-08
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		7e-08
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		1e-07
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-07
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		2e-07
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		4e-07
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		5e-07
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		5e-07
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		3e-06
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		3e-06
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		3e-06
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		4e-06
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		4e-06
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		5e-06
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		9e-06
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		3e-05
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		3e-05
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		4e-05
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		1e-04
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		1e-04
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		3e-04

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  325 bits (832), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 161/343 (46%), Positives = 224/343 (65%), Gaps = 4/343 (1%)
Query: 2   STSIKQPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAW---E 58
           S+S  Q QVITCKAAVAW   +                +R+KV+ T+LC +D   W   +
Sbjct: 16  SSSATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKD 75
Query: 59  TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC-EVLG 117
            + +FP + GHEA+GIVESVG GVTE   G+HV+  +  EC+ C+ CKS K+N C +V  
Sbjct: 76  PEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRA 135
Query: 118 LERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXX 177
               GVM +D+++RFSI GKP+YH+   S+FS+YTVVH     K+  +APLEK+      
Sbjct: 136 ATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCG 195
Query: 178 XXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
                   WN A +  GS V +FGLGTVGL+VA+GAKA GASRIIG+D + +K ++AK F
Sbjct: 196 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNF 255
Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
           GVTEF+NP ++ +P+QQVI  +TDGG DYSFECIG+  ++ +AL+ C  GWG +V +GV 
Sbjct: 256 GVTEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVA 315
Query: 298 KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
               E++      ++GR  KG+ FGG+K ++ +PSLV++YLKK
Sbjct: 316 ASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKK 358

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  308 bits (790), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 154/338 (45%), Positives = 214/338 (63%), Gaps = 4/338 (1%)
Query: 7   QPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAW---ETQAIF 63
           Q QVITCKAAVA+   +                +RIK++ T+LC +D   W   + + +F
Sbjct: 3   QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLF 62
Query: 64  PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC-EVLGLERRG 122
           P I GHEA+GIVESVG GVTE   G+HV+  +  EC+ C+ CKS K+N C +V      G
Sbjct: 63  PCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVG 122
Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXX 182
           +M +D+++RFS+ GKP+YH+   S+FS+YTVVH     K+   APL+K+           
Sbjct: 123 IMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGL 182
Query: 183 XXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
              WN A +  GS V IFGLGTVGL+VA+GAK  GASRIIG+D + +K E AK FGV EF
Sbjct: 183 GAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF 242
Query: 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 302
           +NP D+++P+Q+VI  +TDGG DYSFECIG+  ++  AL+ C  GWG +V +GV     E
Sbjct: 243 VNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQE 302
Query: 303 VAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           ++      ++GR  KG+ FGG+K +T +P LV +Y+ K
Sbjct: 303 ISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNK 340

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  274 bits (700), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 142/335 (42%), Positives = 200/335 (59%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAW---ETQAIFPR 65
           +VI CKAAVAW A +                IRIK++ T +C +D+      + +  FP 
Sbjct: 5   KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPV 64
Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           + GHE +GIVESVGPGVTEF  GE V+ +FI +C  CR C+S K+N C          + 
Sbjct: 65  VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
           S ++TRF+ KG+ V  +   S+FS+YTVV+     K+   APL+ +              
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAA 184
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            N A +  GST  +FGLG VGL+   G  + GA RII VD NP+K EKAK FG T+F+NP
Sbjct: 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP 244
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
           ND++EP+ QV+ ++T+GG D+S EC+G+ G++  AL+SC  GWG++V +G   L  +VA 
Sbjct: 245 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-DVAT 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                ++GRT KGS+FGG+K K  +P +V  YL K
Sbjct: 304 RPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 338

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  261 bits (668), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 200/335 (59%), Gaps = 3/335 (0%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
           +VI CKAAVAW AG+                +RIK++ T++C +D   ++  + +  FP 
Sbjct: 4   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I GHE +GIVESVG GVT+   G+ V+ ++I +C  C+ C + K+N C+ + + +   + 
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+              
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            N A +  GS   +FGLG VGL+V  G K  GASRIIGVD N +K  +AK FG TE +NP
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A 
Sbjct: 244 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIAT 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                ++GRT KG+ FGGWK    +P LV+ Y+ K
Sbjct: 304 RPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  261 bits (668), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 200/335 (59%), Gaps = 3/335 (0%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
           +VI CKAAVAW AG+                +RIK++ T++C +D   ++  + +  FP 
Sbjct: 4   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I GHE +GIVESVG GVT+   G+ V+ ++I +C  C+ C + K+N C+ + + +   + 
Sbjct: 64  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 123
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+              
Sbjct: 124 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            N A +  GS   +FGLG VGL+V  G K  GASRIIGVD N +K  +AK FG TE +NP
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A 
Sbjct: 244 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIAT 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                ++GRT KG+ FGGWK    +P LV+ Y+ K
Sbjct: 304 RPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 338

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  261 bits (668), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 200/335 (59%), Gaps = 3/335 (0%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
           +VI CKAAVAW AG+                +RIK++ T++C +D   ++  + +  FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I GHE +GIVESVG GVT+   G+ V+ ++I +C  C+ C + K+N C+ + + +   + 
Sbjct: 63  ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+              
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            N A +  GS   +FGLG VGL+V  G K  GASRIIGVD N +K  +AK FG TE +NP
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 242
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A 
Sbjct: 243 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIAT 302
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                ++GRT KG+ FGGWK    +P LV+ Y+ K
Sbjct: 303 RPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  258 bits (660), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 137/335 (40%), Positives = 199/335 (59%), Gaps = 3/335 (0%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD---ITAWETQAIFPR 65
           +VI CKAAVAW AG+                +RIK++ T++C +D   ++  + +  FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62
Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I GH  +GIVESVG GVT+   G+ V+ ++I +C  C+ C + K+N C+ + + +   + 
Sbjct: 63  ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+              
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            N A +  GS   +FGLG VGL+V  G K  GASRIIGVD N +K  +AK FG TE +NP
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 242
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A 
Sbjct: 243 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIAT 302
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                ++GRT KG+ FGGWK    +P LV+ Y+ K
Sbjct: 303 RPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  252 bits (644), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 194/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ +F  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 137/335 (40%), Positives = 194/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ +F  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N ++  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 193/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ +F  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V  GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  251 bits (641), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 193/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ +F  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V  GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  251 bits (641), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 190/335 (56%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V   +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
            GHEA+GIVESVG GVT    G+ V+ +F  +C  CR CK+ +SN C    L   RG + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D   RF+  GKP++H+  VS+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA ++ GST  +FGLG VGLSV  G KA GA+RII VD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+K +TDGG D+SFE IG    +  +L  C +  G +V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSI 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L L+GRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAK 338

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  251 bits (641), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 193/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ +F  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG +FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAK 338

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  251 bits (640), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 136/334 (40%), Positives = 192/334 (57%), Gaps = 3/334 (0%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V   +CRSD  + +    A  P I
Sbjct: 5   KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHEA+GIVES+G GVT    G+ V+ +FI +C  C  CK  + N C       RG M  
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQ- 123
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
           D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+               
Sbjct: 124 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAV 183
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
            VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP 
Sbjct: 184 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 243
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
           D  +P+Q+V+  +++GG D+SFE IG    +  AL  C + +G++V +GVP     ++ +
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMN 303
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
             L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  251 bits (640), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 136/334 (40%), Positives = 192/334 (57%), Gaps = 3/334 (0%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V   +CRSD  + +    A  P I
Sbjct: 5   KVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHEA+GIVES+G GVT    G+ V+ +FI +C  C  CK  + N C       RG M  
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQ- 123
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
           D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+               
Sbjct: 124 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAV 183
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
            VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP 
Sbjct: 184 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 243
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
           D  +P+Q+V+  +++GG D+SFE IG    +  AL  C + +G++V +GVP     ++ +
Sbjct: 244 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMN 303
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
             L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 PMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  251 bits (640), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 137/335 (40%), Positives = 193/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ +F  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG  GLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  249 bits (637), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 137/335 (40%), Positives = 194/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ ++  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  249 bits (635), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/335 (40%), Positives = 193/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ +   +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  249 bits (635), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/335 (40%), Positives = 190/335 (56%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V   +CR+D  + +       P I
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
            GHEA+GIVESVG GVT    G+ V+ +F  +C  CR CK+ +SN C    L   RG + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D   RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            NVA ++ GST  +FGLG VGLS   G KA GA+RII VD N +K  KAK  G TE +NP
Sbjct: 184 VNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+K +TDGG D+SFE IG    +  +L  C +  G +V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSI 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L L+GRT KG+++GG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  249 bits (635), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/335 (40%), Positives = 190/335 (56%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V   +CR+D  + +       P I
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
            GHEA+GIVESVG GVT    G+ V+ +F  +C  CR CK+ +SN C    L   RG + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D   RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            NVA ++ GST  +FGLG VGLS   G KA GA+RII VD N +K  KAK  G TE +NP
Sbjct: 184 VNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+K +TDGG D+SFE IG    +  +L  C +  G +V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSI 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L L+GRT KG+++GG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 136/335 (40%), Positives = 193/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ ++  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG  GLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  246 bits (629), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 136/335 (40%), Positives = 192/335 (57%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V T +CRSD  + +       P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ +F  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V + V      ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSM 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  246 bits (629), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 189/335 (56%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V   +C +D  + +       P I
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
            GHEA+GIVESVG GVT    G+ V+ +F  +C  CR CK+ +SN C    L   RG + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D   RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            NVA ++ GST  +FGLG VGLS   G KA GA+RII VD N +K  KAK  G TE +NP
Sbjct: 184 VNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+K +TDGG D+SFE IG    +  +L  C +  G +V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSI 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L L+GRT KG+++GG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  245 bits (626), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 189/335 (56%), Gaps = 4/335 (1%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V   +C +D  + +       P I
Sbjct: 5   KVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMH 125
            GHEA+GIVESVG GVT    G+ V+ +F  +C  CR CK+ +SN C    L   RG + 
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQ 124
Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXX 185
            D   RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+              
Sbjct: 125 -DGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSA 183
Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            NVA ++ GST  +FGLG VGLS   G KA GA+RII VD N +K  KAK  G TE +NP
Sbjct: 184 VNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINP 243
Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+K +TDGG D+SFE IG    +  +L  C +  G +V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSI 303
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L L+GRT KG+++GG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK 338

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  242 bits (618), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 184/334 (55%), Gaps = 3/334 (0%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQAI--FPRI 66
           +VI CKAAV W   Q                +RIK++ T +CR+D    +   +  FP I
Sbjct: 5   KVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKFPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHEA+GIVES+G GVT    G+ V+ +F+ +C+ C  C++   N C    +  RGV+ +
Sbjct: 65  VGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL-A 123
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
           D  TRF+ KGKPV+H+   S+F+EYTVV      K+   AP EK+               
Sbjct: 124 DGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAV 183
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
               +  GST V+FGLG VGLSV  G K+ GASRIIG+D N +K EKA A G TE ++P 
Sbjct: 184 KTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK 243
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
           D+ +P+ +V+  +T     Y+FE IG    +  AL SC   +G +V +GVP     +   
Sbjct: 244 DSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYD 303
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
             L  +GRT KG +FGG K + D+P LV  +L K
Sbjct: 304 PMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  242 bits (618), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 132/334 (39%), Positives = 184/334 (55%), Gaps = 3/334 (0%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQAI--FPRI 66
           +VI CKAAV W   Q                +RIK++ T +CR+D    +   +  FP I
Sbjct: 5   KVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTMVSKFPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHEA+GIVES+G GVT    G+ V+ +F+ +C+ C  C++   N C    +  RGV+ +
Sbjct: 65  VGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVL-A 123
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
           D  TRF+ KGKPV+H+   S+F+EYTVV      K+   AP EK+               
Sbjct: 124 DGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAV 183
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
               +  GST V+FGLG VGLSV  G K+ GASRIIG+D N +K EKA A G TE ++P 
Sbjct: 184 KTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK 243
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
           D+ +P+ +V+  +T     Y+FE IG    +  AL SC   +G +V +GVP     +   
Sbjct: 244 DSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYD 303
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
             L  +GRT KG +FGG K + D+P LV  +L K
Sbjct: 304 PMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  241 bits (615), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 134/342 (39%), Positives = 188/342 (54%), Gaps = 7/342 (2%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQ---AIFPR 65
           +VI CKAA+AW AG+                +RI+++ TSLC +D T  +++     FP 
Sbjct: 7   KVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLAFPV 66
Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC-EVLGLERRGV- 123
           I GHEA+GIVES+GPGVT    G+ V+ ++   C+ C+ C S  +N C ++  L+     
Sbjct: 67  IVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASD 126
Query: 124 --MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXX 181
             +  D+ +RF+ KGKPVYH+   S+FS+YTVV      K+   A LE++          
Sbjct: 127 QQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGFSTG 186
Query: 182 XXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
                N A ++ GST  +FGLG VGLS   G KA GASRIIG+D N EK  KAKA G T+
Sbjct: 187 YGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATD 246
Query: 242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
            LNP D ++P+Q+VI  +T GG D++ +C G +  +  AL     GWG    +GV     
Sbjct: 247 CLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSK 306
Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN 343
            +       + GRT+ G+ FGGWK    +P LV  Y  K  N
Sbjct: 307 GLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFN 348

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  239 bits (609), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 130/334 (38%), Positives = 186/334 (55%), Gaps = 2/334 (0%)
Query: 9   QVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSD--ITAWETQAIFPRI 66
           +VI CKAAV W   +                +RIK+V   +C +D  + +       P I
Sbjct: 5   KVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTPLPVI 64
Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHEA+GIVESVG GVT    G+ V+ + I +C  CR CK+ +SN C    +        
Sbjct: 65  LGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQ 124
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
           D  +RF+ + KP++H+  +S+FS+YTVV      K+ + +PLEK+               
Sbjct: 125 DGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAV 184
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
           NVA ++ GST  +FGLG VGLS   G KA GA+RII VD N +K  KAK  G TE +NP 
Sbjct: 185 NVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQ 244
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
           D  +P+Q+V+K +TDGG D+SFE IG    +  +L  C +  G +V +GVP     ++ +
Sbjct: 245 DYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMN 304
Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
             L L+GRT KG++ GG+K K  +P LV  ++ K
Sbjct: 305 PMLLLTGRTWKGAILGGFKSKECVPKLVADFMAK 338

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  236 bits (601), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 184/340 (54%), Gaps = 8/340 (2%)
Query: 7   QPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWE--TQAIFP 64
           Q +VI CKAA+AW  G                 +RI+V+ T +C +DI A +   +A+FP
Sbjct: 3   QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALFP 62
Query: 65  RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV- 123
            + GHE +GIVESVGPGVT F  G+ V+  F  +CK C+ C S  +N C  L   +    
Sbjct: 63  VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 124 ---MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXX 180
              +  D+ +RF+ KG+ +YH+  VSSFS+YTVV      +V   A LE++         
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSS 182
Query: 181 XXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
                 N A ++ GST  +FGLG VGLS   G K  GASRII +D N EK  KAKA G T
Sbjct: 183 GYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT 242
Query: 241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300
           + LNP + ++PVQ VI  +T GG DYS +C G    +  A+     GWG    +G  K+ 
Sbjct: 243 DCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA-KVD 301
Query: 301 PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                   + L GR++ G+ FGGWK    +P+LV+ Y  K
Sbjct: 302 EMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  235 bits (599), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 184/340 (54%), Gaps = 8/340 (2%)
Query: 7   QPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWE--TQAIFP 64
           Q +VI CKAA+AW  G                 +RI+V+ T +C +DI A +   +A+FP
Sbjct: 3   QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFP 62
Query: 65  RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV- 123
            + GHE +GIVESVGPGVT F  G+ V+  F  +CK C+ C S  +N C  L   +    
Sbjct: 63  VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122
Query: 124 ---MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXX 180
              +  D+ +RF+ KG+ +YH+  VSSFS+YTVV      +V   A LE++         
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSS 182
Query: 181 XXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
                 N A ++ GST  +FGLG VGLS   G K  GASRII +D N EK  KAKA G T
Sbjct: 183 GYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT 242
Query: 241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK 300
           + LNP + ++PVQ VI  +T GG DYS +C G    +  A+     GWG    +G  K+ 
Sbjct: 243 DCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGA-KVD 301
Query: 301 PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                   + L GR++ G+ FGGWK    +P+LV+ Y  K
Sbjct: 302 EMTIPTVDVIL-GRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/335 (40%), Positives = 187/335 (55%), Gaps = 4/335 (1%)
Query: 11  ITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWE--TQAIFPRIFG 68
           ITCKAAVAW   +                +RIK++ + +C SD +  +    + FP I G
Sbjct: 8   ITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILG 67
Query: 69  HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
           HEA G+VES+G GVT    G+ V+ +F+ +C +CR CKS  SN CE   +  +  + +D 
Sbjct: 68  HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADM 127
Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNV 188
            +RF+ +GKP+Y+    S+F+EYTVV      K+   APLE                 N 
Sbjct: 128 TSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAV-NT 186
Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
           A ++ GST  +FGLG VG S   G KA GASRIIGV T+ +K  KA   G TE LNP D 
Sbjct: 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDY 246
Query: 249 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG 308
           ++P+ +VI   T+GG DY+ EC G    +  ALQS   G G+ V LG+      +     
Sbjct: 247 DKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPL 306
Query: 309 LFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN 343
           L L+GR+LKGS+FGG+K + ++  LV+ Y+KK  N
Sbjct: 307 LLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKIN 340

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score =  132 bits (331), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 144/306 (47%), Gaps = 15/306 (4%)
Query: 40  IRIKVVCTSLCRSDITAWETQ--AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97
           + +KVV T +C +D+   + +     P + GHE SGI+E++GP VTE   G+HV+  + G
Sbjct: 34  VLVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVVLSY-G 92
Query: 98  ECKTCRQCKSDKSNTC-EVLGLERRGVMHSDQQTRFSI----KGKPVYHYCAVSSFSEYT 152
            C  C QC +     C E  G   R    +D +   ++    +G    H+ A SSF+ Y 
Sbjct: 93  YCGKCTQCNTGNPAYCSEFFG---RNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYA 149
Query: 153 VVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQG 212
           +      VKV+   P+E +               N   ++  S+ V +G G VGLS    
Sbjct: 150 LSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLA 209
Query: 213 AKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272
           AK  GAS II VD    + E AK  G T  +N +   +PV   IK ITDGG +++ E  G
Sbjct: 210 AKVCGASIIIAVDIVESRLELAKQLGATHVIN-SKTQDPV-AAIKEITDGGVNFALESTG 267
Query: 273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWKPKTDLP 331
              ++   + +      +AV +G P+L          L L G+T+ G + G   PK  +P
Sbjct: 268 SPEILKQGVDALGILGKIAV-VGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIP 326
Query: 332 SLVNRY 337
            LV  Y
Sbjct: 327 ELVRLY 332

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 115/267 (43%), Gaps = 39/267 (14%)
Query: 40  IRIKVVCTSLCRSDITAWETQAIF------PRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
           I ++V   S+C +D+  W+  A        P + GHE SG+VE+VGPGV     G+HV  
Sbjct: 28  ILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGDHVSL 87
Query: 94  VFIGECKTCRQCKSDKSNTC---EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
                C  C  C++   + C   ++LG++R G                         F+E
Sbjct: 88  ESHIVCHACPACRTGNYHVCLNTQILGVDRDG------------------------GFAE 123
Query: 151 YTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVA 210
           Y VV +  A       P E +              +  + +S G +V+I G G +GL  A
Sbjct: 124 YVVVPAENAWVNPKDLPFE-VAAILEPFGNAVHTVYAGSGVS-GKSVLITGAGPIGLMAA 181
Query: 211 QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270
              +A GA  I+  D NP +   A+ +     +NP +  E + +V++R+T  G +   E 
Sbjct: 182 MVVRASGAGPILVSDPNPYRLAFARPYA-DRLVNPLE--EDLLEVVRRVTGSGVEVLLEF 238
Query: 271 IGDTGMITTALQSCCDGWGLAVTLGVP 297
            G+   I   L +   G G A  LG+P
Sbjct: 239 SGNEAAIHQGLMALIPG-GEARILGIP 264

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 31/224 (13%)
Query: 40  IRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIG 97
           +R+K+  + LC SD+          +P   GHE SG +++VG GV + + G+ V  V + 
Sbjct: 28  VRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLL 87
Query: 98  ECKTCRQCKSDKSNTC---EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
            C TC +C     + C   + +G  R G                         F+EY VV
Sbjct: 88  PCFTCPECLKGFYSQCAKYDFIGSRRDG------------------------GFAEYIVV 123
Query: 155 HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
                  + +  P+E                +++A   +   V+I G GT+GL   Q A 
Sbjct: 124 KRKNVFALPTDMPIED--GAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAV 181
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 258
           A GA  +  +D + EK   AK+FG  +  N ++ + P  Q + R
Sbjct: 182 ALGAKSVTAIDISSEKLALAKSFGAMQTFNSSEMSAPQMQSVLR 225

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 131/305 (42%), Gaps = 45/305 (14%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
           ++ +  S C SDI      A+  R   I GHEA G V  VG  V +F  G+ V+      
Sbjct: 29  VRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV----- 83
Query: 99  CKTCRQCKSDKSNTCEV-LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157
                 C +    + EV  G +        Q +   + G    ++     F EY   H  
Sbjct: 84  -----PCTTPDWRSLEVQAGFQ--------QHSNGMLAGWKFSNFKD-GVFGEY--FHVN 127
Query: 158 CAVKVSSIAPLEKIXXXXXXXXXXXXXXWN---VADISKGSTVVIFGLGTVGLSVAQGAK 214
            A    +I P +                ++   +ADI  G+TV + G+G VGL    GAK
Sbjct: 128 DADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273
            RGA RII V + P   + AK +G T+ +N  D   P++  I  +T+G G D +    G+
Sbjct: 188 LRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDG--PIESQIMNLTEGKGVDAAIIAGGN 245
Query: 274 TGMITTALQSCCDG--------WGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325
             ++ TA++    G        +G    L VP+L+      +G  ++ +T+KG L  G +
Sbjct: 246 ADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLE------WGCGMAHKTIKGGLCPGGR 299
Query: 326 PKTDL 330
            + ++
Sbjct: 300 LRAEM 304

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
           ++ +  + C SDI      AI  R   I GHEA G V  VG  V +F  G+ V+   I  
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99  CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT---RFSIKGKPVYHYCAVSSFSEYTVVH 155
                   +    T EV   +R    HS       +FS     V+      + ++  + H
Sbjct: 87  --------TPDWRTSEV---QRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH 135
Query: 156 SGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKA 215
                 +    PLE                  +ADI  G+TV + G+G VGL    GAK 
Sbjct: 136 ------LPKEIPLEAAVMIPDMMTTGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAKL 188
Query: 216 RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT 274
           RGA RII V + P   + AK +G T+ +N  D   P++  I  +T+G G D +    G+ 
Sbjct: 189 RGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDG--PIESQIMNLTEGKGVDAAIIAGGNA 246
Query: 275 GMITTALQSCCDG--------WGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320
            ++ TA++    G        +G    L VP+L+      +G  ++ +T+KG L
Sbjct: 247 DIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLE------WGCGMAHKTIKGGL 294

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
           ++ +  + C SDI      AI  R   I GHEA G V  VG  V +F  G+ V+   I  
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99  CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT---RFSIKGKPVYHYCAVSSFSEYTVVH 155
                   +    T EV   +R    HS       +FS     V+      + ++  + H
Sbjct: 87  --------TPDWRTSEV---QRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH 135
Query: 156 SGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKA 215
                 +    PLE                  +ADI  G+TV + G+G VGL    GAK 
Sbjct: 136 ------LPKEIPLEAAVMIPDMMTTGFHGA-ELADIELGATVAVLGIGPVGLMAVAGAKL 188
Query: 216 RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT 274
           RGA RII V + P   + AK +G T+ +N  D   P++  I  +T+G G D +    G+ 
Sbjct: 189 RGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDG--PIESQIMNLTEGKGVDAAIIAGGNA 246
Query: 275 GMITTALQSCCDG--------WGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320
            ++ TA++    G        +G    L VP+L+      +G  ++ +T+KG L
Sbjct: 247 DIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLE------WGCGMAHKTIKGGL 294

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 71.2 bits (173), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 126/301 (41%), Gaps = 37/301 (12%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
           ++ +  S C SDI      A+  R   I GHEA G V  VG  V +F  G+ V+      
Sbjct: 29  VRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV----- 83
Query: 99  CKTCRQCKSDKSNTCEV-LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157
                 C +    + EV  G +        Q +   + G    ++     F EY   H  
Sbjct: 84  -----PCTTPDWRSLEVQAGFQ--------QHSNGMLAGWKFSNFKD-GVFGEY--FHVN 127
Query: 158 CAVKVSSIAPLEKIXXXXXXXXXXXXXXWN---VADISKGSTVVIFGLGTVGLSVAQGAK 214
            A    +I P +                ++   +ADI  GS+VV+ G+G VGL    GAK
Sbjct: 128 DADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274
            RGA RIIGV + P   E AK +G T+ LN   N   V QV+K     G D      G +
Sbjct: 188 LRGAGRIIGVGSRPICVEAAKFYGATDILNYK-NGHIVDQVMKLTNGKGVDRVIMAGGGS 246
Query: 275 GMITTALQSCCDGWGLAVTL-----GVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD 329
             ++ A+     G G+   +     G   L P V   +G  ++ +T+KG L  G + + +
Sbjct: 247 ETLSQAVSMVKPG-GIISNINYHGSGDALLIPRV--EWGCGMAHKTIKGGLCPGGRLRAE 303
Query: 330 L 330
           +
Sbjct: 304 M 304

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 126/300 (42%), Gaps = 35/300 (11%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
           ++ +  S C SDI      A+  R   I GHEA G V  VG  V +F  G+ V+      
Sbjct: 29  VRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV----- 83
Query: 99  CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 158
                 C +    + EV    + G     Q +   + G    ++     F EY   H   
Sbjct: 84  -----PCTTPDWRSLEV----QAGF---PQHSNGMLAGWKFSNFKD-GVFGEY--FHVND 128
Query: 159 AVKVSSIAPLEKIXXXXXXXXXXXXXXWN---VADISKGSTVVIFGLGTVGLSVAQGAKA 215
           A    +I P +                ++   +ADI  GS+VV+ G+G VGL    GAK 
Sbjct: 129 ADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKL 188
Query: 216 RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275
           RGA RIIGV + P   E AK +G T+ LN   N   V QV+K     G D      G + 
Sbjct: 189 RGAGRIIGVGSRPICVEAAKFYGATDILN-YKNGHIVDQVMKLTNGKGVDRVIMAGGGSE 247
Query: 276 MITTALQSCCDGWGLAVTL-----GVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDL 330
            ++ A+     G G+   +     G   L P V   +G  ++ +T+KG L  G + + ++
Sbjct: 248 TLSQAVSMVKPG-GIISNINYHGSGDALLIPRV--EWGCGMAHKTIKGGLCPGGRLRAEM 304

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 121/293 (41%), Gaps = 41/293 (13%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
           ++ +  + C SDI      AI  R   I GHEA G V  VG  V +F  G+ V+   I  
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99  CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT---RFSIKGKPVYHYCAVSSFSEYTVVH 155
                   +    T EV   +R    HS       +FS     V+      + ++  + H
Sbjct: 87  --------TPDWRTSEV---QRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH 135
Query: 156 SGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKA 215
                 +    PLE                  +ADI  GS+VV+ G+G VGL    GAK 
Sbjct: 136 ------LPKEIPLEAAVMIPDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKL 188
Query: 216 RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275
           RGA RIIGV + P   E AK +G T+ LN   N   V QV+K     G D      G + 
Sbjct: 189 RGAGRIIGVGSRPICVEAAKFYGATDILN-YKNGHIVDQVMKLTNGKGVDRVIMAGGGSE 247
Query: 276 MITTALQSCCDG--------WGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320
            ++ A++    G         G    L +P+++      +G  ++ +T+KG L
Sbjct: 248 TLSQAVKMVKPGGIISNINYHGSGDALLIPRVE------WGCGMAHKTIKGGL 294

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 124/301 (41%), Gaps = 40/301 (13%)
Query: 40  IRIKVVCTSLCRSDI----TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTV 94
           + I ++   +C SDI    + W+ + I+P I GHE +GI++ VG GV +F  G+ V +  
Sbjct: 32  VLIDILYAGICHSDIHSAYSEWK-EGIYPMIPGHEIAGIIKEVGKGVKKFKIGDVVGVGC 90
Query: 95  FIGECKTCRQCKSDKSNTCE--VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYT 152
           F+  CK C+ CK  +   C   V   +     H ++                +  +S   
Sbjct: 91  FVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEP--------------HMGGYSNNI 136
Query: 153 VVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQG 212
           VV     + V   APLEK+                 + ++KG+ V + G G +G    + 
Sbjct: 137 VVDENYVISVDKNAPLEKV-APLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKY 195
Query: 213 AKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECI 271
           A A GA   +    N  K + A + GV  F  +P    E +  +I  I      Y     
Sbjct: 196 AVAMGAEVSV-FARNEHKKQDALSMGVKHFYTDPKQCKEELDFIISTIP---THYD---- 247
Query: 272 GDTGMITTALQSCCDGWGLAVTLGVP--KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD 329
                +   L+       LA+ +G+P  ++ P ++    + L  R + GSL GG K   +
Sbjct: 248 -----LKDYLKLLTYNGDLAL-VGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQE 301
Query: 330 L 330
           +
Sbjct: 302 M 302

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/316 (25%), Positives = 122/316 (38%), Gaps = 31/316 (9%)
Query: 12  TCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITA----WETQAIFPRIF 67
           T KAAV    G+                I++ +  + +C +D+ A    W  +   P I 
Sbjct: 25  TMKAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIP 84
Query: 68  GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
           GHE  G V +VG GV    EG+ V +      C  CR C       CE            
Sbjct: 85  GHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE-----------E 133
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW 186
              T +S+ G    +  A  +F    V H    +  + IAP+                  
Sbjct: 134 QLNTGYSVNGGFAEYVVADPNF----VGHLPKNIDFNEIAPV-------LCAGVTVYKGL 182
Query: 187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 246
            V D   G  VVI G+G +G    Q A+A G + +  VD +  K + A+  G T  +N  
Sbjct: 183 KVTDTKPGDWVVISGIGGLGHMAVQYARAMGLN-VAAVDIDDRKLDLARRLGATVTVNAK 241
Query: 247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
              +P    I++ TDGGA               AL     G  +++  G+P     ++  
Sbjct: 242 TVADPA-AYIRKETDGGAQGVLVTAVSPKAFEQALGMVARGGTVSLN-GLPPGDFPLSI- 298
Query: 307 YGLFLSGRTLKGSLFG 322
           + + L+G T++GS+ G
Sbjct: 299 FNMVLNGVTVRGSIVG 314

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 120/293 (40%), Gaps = 41/293 (13%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
           ++ +  + C SDI      AI  R   I GHEA G V  VG  V +F  G+ V+   I  
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99  CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT---RFSIKGKPVYHYCAVSSFSEYTVVH 155
                   +    T EV   +R    HS       +FS     V+      + ++  + H
Sbjct: 87  --------TPDWRTSEV---QRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH 135
Query: 156 SGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKA 215
                 +    PLE                  +ADI  GS+VV+ G+G VGL    GAK 
Sbjct: 136 ------LPKEIPLEAAVMIPDMMTTGFHGA-ELADIQMGSSVVVIGIGAVGLMGIAGAKL 188
Query: 216 RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275
           RGA RIIGV + P   E AK +G T+ LN   N   V QV+K     G D      G + 
Sbjct: 189 RGAGRIIGVGSRPICVEAAKFYGATDILN-YKNGHIVDQVMKLTNGKGVDRVIMAGGGSE 247
Query: 276 MITTALQSCCDG--------WGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320
            ++ A+     G         G    L +P+++      +G  ++ +T+KG L
Sbjct: 248 TLSQAVSMVKPGGIISNINYHGSGDALLIPRVE------WGCGMAHKTIKGGL 294

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 121/291 (41%), Gaps = 37/291 (12%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
           ++ +  S C SDI      A+  R   I GHEA G V  VG  V +F  G+ V+      
Sbjct: 29  VRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDRVIV----- 83
Query: 99  CKTCRQCKSDKSNTCEV-LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 157
                 C +    + EV  G +        Q +   + G    ++     F EY   H  
Sbjct: 84  -----PCTTPDWRSLEVQAGFQ--------QHSNGMLAGWKFSNFKD-GVFGEY--FHVN 127
Query: 158 CAVKVSSIAPLEKIXXXXXXXXXXXXXXWN---VADISKGSTVVIFGLGTVGLSVAQGAK 214
            A    +I P +                ++   +ADI  GS+VV+ G+G VGL    GAK
Sbjct: 128 DADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAK 187
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 274
            RGA RIIGV + P   E AK +G T+ LN   N     QV+K     G D      G +
Sbjct: 188 LRGAGRIIGVGSRPICVEAAKFYGATDILNYK-NGHIEDQVMKLTNGKGVDRVIMAGGGS 246
Query: 275 GMITTALQSCCDGWGLAVTL-----GVPKLKPEVAAHYGLFLSGRTLKGSL 320
             ++ A++    G G+   +     G   L P V   +G  ++ +T+KG L
Sbjct: 247 ETLSQAVKMVKPG-GIISNINYHGSGDALLIPRV--EWGCGMAHKTIKGGL 294

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 82/211 (38%), Gaps = 28/211 (13%)
Query: 40  IRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTV 94
           + +++    +C +D+ A    W  +   P I GHE  GIVE VGPGVT    G+ V +  
Sbjct: 28  VLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPW 87
Query: 95  FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
               C  C  C S +   CE             +   +S+ G           ++EY   
Sbjct: 88  LYSACGHCDYCLSGQETLCE-----------HQKNAGYSVDG----------GYAEYCRA 126
Query: 155 HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
            +   VK+      E+                 V     G  V I+G+G +G    Q AK
Sbjct: 127 AADYVVKIPDNLSFEE-AAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
           A G + ++ VD   EK E AK  G    +NP
Sbjct: 186 AMGLN-VVAVDIGDEKLELAKELGADLVVNP 215

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 81/211 (38%), Gaps = 28/211 (13%)
Query: 40  IRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTV 94
           + +++    +C +D+ A    W  +   P I GHE  GIVE VGPGVT    G+ V +  
Sbjct: 28  VLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGIPW 87
Query: 95  FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
               C  C  C S +   CE             +   +S+ G           ++EY   
Sbjct: 88  LYSACGHCDYCLSGQETLCE-----------HQKNAGYSVDG----------GYAEYCRA 126
Query: 155 HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAK 214
            +   VK+      E+                 V     G  V I+G+G  G    Q AK
Sbjct: 127 AADYVVKIPDNLSFEE-AAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
           A G + ++ VD   EK E AK  G    +NP
Sbjct: 186 AMGLN-VVAVDIGDEKLELAKELGADLVVNP 215

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 94/250 (37%), Gaps = 26/250 (10%)
Query: 40  IRIKVVCTSLCRSDITAWETQAI-----FPRIFGHEASGIVESVGPGVTEFNEGEHVLTV 94
           I +KV    LC SDI   +  A       P   GHE  G V  +G GVT F  G+ V   
Sbjct: 28  ILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVY 87
Query: 95  FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
               C  C  C   + N C                TR +  G       +  S +EY +V
Sbjct: 88  GPWGCGACHACARGRENYC----------------TRAADLGITPPGLGSPGSMAEYMIV 131
Query: 155 HSG-CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGA 213
            S    V +  + P+                   +  +  GST V+ G+G +G    Q  
Sbjct: 132 DSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQIL 191
Query: 214 KARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
           +A  A+R+I VD + ++   A+  G    +    +       I+ +T G GA   F+ +G
Sbjct: 192 RAVSAARVIAVDLDDDRLALAREVGADAAVK---SGAGAADAIRELTGGQGATAVFDFVG 248
Query: 273 DTGMITTALQ 282
               I TA Q
Sbjct: 249 AQSTIDTAQQ 258

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 105/255 (41%), Gaps = 39/255 (15%)
Query: 40  IRIKVVCTSLCRSDITAWE------TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
           + IKV+ TS+C +D+  +E      ++   P+I GHE +G V  +GPGV     G++V  
Sbjct: 31  VLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVSV 90
Query: 94  ---VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
              +  G+C  CR+ +       ++ G++  GV                        F+E
Sbjct: 91  ETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGV------------------------FAE 126
Query: 151 YTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVA 210
           Y VV +    K     P E                  +A    G +V+I G G +GL   
Sbjct: 127 YAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTV---LAGPISGKSVLITGAGPLGLLGI 183
Query: 211 QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269
             AKA GA  +I  + +  + E AK  G    +NP +  E V + +  ITDG G D   E
Sbjct: 184 AVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVXDITDGNGVDVFLE 241
Query: 270 CIGDTGMITTALQSC 284
             G    +   LQ+ 
Sbjct: 242 FSGAPKALEQGLQAV 256

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 105/255 (41%), Gaps = 39/255 (15%)
Query: 40  IRIKVVCTSLCRSDITAWE------TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
           + IKV+ TS+C +D+  +E      ++   P+I GHE +G V  +GPGV     G++V  
Sbjct: 32  VLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGDYVSV 91
Query: 94  ---VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
              +  G+C  CR+ +       ++ G++  GV                        F+E
Sbjct: 92  ETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGV------------------------FAE 127
Query: 151 YTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVA 210
           Y VV +    K     P E                  +A    G +V+I G G +GL   
Sbjct: 128 YAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTV---LAGPISGKSVLITGAGPLGLLGI 184
Query: 211 QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269
             AKA GA  +I  + +  + E AK  G    +NP +  E V + +  ITDG G D   E
Sbjct: 185 AVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVXDITDGNGVDVFLE 242
Query: 270 CIGDTGMITTALQSC 284
             G    +   LQ+ 
Sbjct: 243 FSGAPKALEQGLQAV 257

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 40  IRIKVVCTSLCRSDITAWE------TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
           + IKV+ TS+C +D+  +E      ++   P+I GHE +G V  VGPGV +   G+++  
Sbjct: 32  VLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGDYISV 91
Query: 94  VFIGECKTCRQCKSDKSNTCE---VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
                C  C  CK ++ + C+   + G++  GV                        F+ 
Sbjct: 92  ETHIVCGKCYACKHNRYHVCQNTKIFGVDMDGV------------------------FAH 127
Query: 151 YTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVA 210
           Y +V +  A K     P E                  +A    G + +I G G +GL   
Sbjct: 128 YAIVPAKNAWKNPKDMPPEYAALQEPLGNAVDTV---LAGPIAGRSTLITGAGPLGLLGI 184
Query: 211 QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269
             AKA GA  +I  + +  + + AK  G    +NP + + PV+ V+  ITDG G +   E
Sbjct: 185 AVAKASGAYPVIVSEPSEFRRKLAKKVGADYVVNPFEED-PVKFVMD-ITDGAGVEVFLE 242
Query: 270 CIGDTGMITTALQSCCDG 287
             G    +   L++   G
Sbjct: 243 FSGAPKALEQGLKAVTPG 260

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 86/212 (40%), Gaps = 33/212 (15%)
Query: 40  IRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFI 96
           +R+KV    +C SD   +      A +PR+ GHE  G++++VG GV     GE V    +
Sbjct: 47  VRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPV 106
Query: 97  GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS 156
             C  C  C   K N C  L +   GV H+D                    FSEY VV +
Sbjct: 107 VSCGHCYPCSIGKPNVCTTLAV--LGV-HAD------------------GGFSEYAVVPA 145
Query: 157 GCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNV---ADISKGSTVVIFGLGTVGLSVAQGA 213
             A K+      E +               NV      ++  TV+++G G +GL++ Q  
Sbjct: 146 KNAWKIP-----EAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVL 200
Query: 214 K-ARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
           K       +I  D   E+ EKAK  G    +N
Sbjct: 201 KGVYNVKNVIVADRIDERLEKAKESGADWAIN 232

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 110/301 (36%), Gaps = 59/301 (19%)
Query: 40  IRIKVVCTSLCRSDITA----WETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVF 95
           +++K+  + +C +D+ A    W  +   P I GHE  G V +VG GV+   EG+ V   +
Sbjct: 30  VQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVGVPW 89
Query: 96  I-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
           +   C  C  C       CE             Q T +S+ G           + EY V 
Sbjct: 90  LYSACGYCEHCLQGWETLCE-----------KQQNTGYSVNG----------GYGEYVVA 128
Query: 155 HSGCA------VKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLS 208
                      V    IAP+                   V D   G  VVI G+G +G  
Sbjct: 129 DPNYVGLLPDKVGFVEIAPI-------LCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHV 181
Query: 209 VAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 268
             Q A+A G  R+  VD +  K   A+  G    +N  D            TD  A    
Sbjct: 182 AVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD------------TDPAAWLQK 228
Query: 269 ECIGDTGMITTAL--QSCCDGWGLAVTLGVPKLKPEVAAHYG-----LFLSGRTLKGSLF 321
           E  G  G++ TA+  ++     G+    G   L       +G     + L G T++GS+ 
Sbjct: 229 EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIV 288
Query: 322 G 322
           G
Sbjct: 289 G 289

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 44/246 (17%)
Query: 40  IRIKVVCTSLCRSDITAWETQAI------FPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
           +R+++   +L   D+  W  + +       P + G + SG+V++VGPGV  F  G+ V+ 
Sbjct: 30  VRVRLKAAALNHLDV--WVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVI 87
Query: 94  VFIGECKTCRQCKSDKSNTC---EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 150
                C  C +C + + N C   ++LG  R G                        +++E
Sbjct: 88  NPGLSCGRCERCLAGEDNLCPRYQILGEHRHG------------------------TYAE 123
Query: 151 YTVV-HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSV 209
           Y V+  +  A K  +++  E+                +   +  G  V++   G+ G+SV
Sbjct: 124 YVVLPEANLAPKPKNLS-FEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGS-GVSV 181
Query: 210 A--QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADY 266
           A  Q AK  GA R+I    + +K  +AKA G  E +N    + P +  ++R+T G GAD 
Sbjct: 182 AAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTHPDWPKE--VRRLTGGKGADK 238
Query: 267 SFECIG 272
             +  G
Sbjct: 239 VVDHTG 244

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 98/264 (37%), Gaps = 43/264 (16%)
Query: 12  TCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITA----WETQAIFPRIF 67
           T KAAV    G                 + +K+  + +C +D+ A    W  +   P I 
Sbjct: 6   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 65
Query: 68  GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
           GHE  G V +VG GVT   EG+ V +      C  C  C +     CE           S
Sbjct: 66  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCE-----------S 114
Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA------VKVSSIAPLEKIXXXXXXXXX 180
            Q T +S+ G           ++EY +            V+ + IAP+            
Sbjct: 115 QQNTGYSVNG----------GYAEYVLADPNYVGILPKNVEFAEIAPI-------LCAGV 157
Query: 181 XXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
                    +   G  V I G+G +G    Q A+A G   +  +D +  K E A+  G +
Sbjct: 158 TVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGAS 216
Query: 241 EFLNPNDNNEPVQQVIKRITDGGA 264
             +N     +PV+ + + I  GGA
Sbjct: 217 LTVNAR-QEDPVEAIQRDI--GGA 237

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 80/199 (40%), Gaps = 27/199 (13%)
Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVM 124
           + GHE  GIV+ +G  V+    G+ V   +  E C  C  C S     C  +        
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREV-------- 108
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKIXXXXXXXXXXXX 183
              +   +S+ G            +E  +V +  AVKV   + P+E              
Sbjct: 109 ---KNAGYSVDG----------GMAEEAIVVADYAVKVPDGLDPIE--ASSITCAGVTTY 153
Query: 184 XXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
               V+ +  G   VIFG G +G    Q AK    +++I VD N +K   AK  G    +
Sbjct: 154 KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVII 213
Query: 244 NPNDNNEPVQQVIKRITDG 262
           N  D N PV + IK+IT G
Sbjct: 214 NSGDVN-PVDE-IKKITGG 230

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 95/256 (37%), Gaps = 40/256 (15%)
Query: 40  IRIKVVCTSLCRSDITAWETQAIF------PRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
           + +++    +C SD+  +E   I       P + GHEASG V  VG  V    +G+ V  
Sbjct: 31  VLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAV 90
Query: 94  VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS----SFS 149
                C+ C+ CK  K N C                        P   +CA      + +
Sbjct: 91  EPGVPCRRCQFCKEGKYNLC------------------------PDLTFCATPPDDGNLA 126
Query: 150 EYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSV 209
            Y V  +    K+     LE+                  A +  G+TV++ G G +GL  
Sbjct: 127 RYYVHAADFCHKLPDNVSLEE--GALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVS 184
Query: 210 AQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADY--- 266
              AKA GA  ++    +P + E AK  G    L  +   E    +I+RI     D    
Sbjct: 185 VLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243
Query: 267 SFECIGDTGMITTALQ 282
           + +C G+   IT  + 
Sbjct: 244 TIDCSGNEKCITIGIN 259

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 96/256 (37%), Gaps = 38/256 (14%)
Query: 40  IRIKVVCTSLCRSDITAWET----QAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVF 95
           I ++ +  SL   D    ET       FP +   + SG+VE+VG  VT F  G+ V++ F
Sbjct: 56  IIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPGDRVISTF 115
Query: 96  IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH 155
                   +  + ++   E LG    GV+                        SEY V+ 
Sbjct: 116 APGWLDGLRPGTGRTPAYETLGGAHPGVL------------------------SEYVVLP 151
Query: 156 SGCAVKVSSIAPLEKIXXXXXXXXXXXXXXW----NVADISKGSTVVIFGLGTVGLSVAQ 211
            G  V     AP                  W        +  G  VV+ G G V L   Q
Sbjct: 152 EGWFVA----APKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQ 207
Query: 212 GAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 271
            AKA GA  I+   ++ EK ++A A G    +N  + +  V++V     D GAD+  E  
Sbjct: 208 IAKATGAEVIV-TSSSREKLDRAFALGADHGINRLEEDW-VERVYALTGDRGADHILEIA 265
Query: 272 GDTGMITTALQSCCDG 287
           G  G+  +      DG
Sbjct: 266 GGAGLGQSLKAVAPDG 281

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 80/199 (40%), Gaps = 27/199 (13%)
Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVM 124
           + GHE  GIV+ +G  V+    G+ V   +  E C  C  C S     C  +        
Sbjct: 57  VLGHEGIGIVKEIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREV-------- 108
Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKIXXXXXXXXXXXX 183
              +   +S+ G            +E  +V +  AVKV   + P+E              
Sbjct: 109 ---KNAGYSVDG----------GMAEEAIVVADYAVKVPDGLDPIE--ASSITCAGVTTY 153
Query: 184 XXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
               V+ +  G   VIFG G +G    Q AK    +++I VD N +K   AK  G    +
Sbjct: 154 KAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTI 213
Query: 244 NPNDNNEPVQQVIKRITDG 262
           N  D N PV + IK+IT G
Sbjct: 214 NSGDVN-PVDE-IKKITGG 230

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/315 (22%), Positives = 120/315 (38%), Gaps = 52/315 (16%)
Query: 40  IRIKVVCTSLCRSDITAWETQ---AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVF 95
           +R KV+   +C SD+ + +     +++P + GHE  G V  VG  V + N G+ V +   
Sbjct: 44  VRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCL 103
Query: 96  IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH 155
           +G C +C  C +D  N C  + L    + H    T                 +S + V +
Sbjct: 104 VGACHSCESCANDLENYCPKMILTYASIYHDGTIT--------------YGGYSNHMVAN 149
Query: 156 SGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLS------- 208
               ++     PL+                   A I+  S +  FGL   G         
Sbjct: 150 ERYIIRFPDNMPLD------------GGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLG 197
Query: 209 -----VAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDG 262
                  + AKA G S++  + T+P K E+A K FG   FL   D  +   Q      DG
Sbjct: 198 GLGHVAVKFAKAFG-SKVTVISTSPSKKEEALKNFGADSFLVSRDQEQ--MQAAAGTLDG 254
Query: 263 GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG 322
             D +   +     +   L+S     G  + +G P+   E+ A + L    + + GS  G
Sbjct: 255 IID-TVSAVHPLLPLFGLLKS----HGKLILVGAPEKPLELPA-FSLIAGRKIVAGSGIG 308
Query: 323 GWKPKTDLPSLVNRY 337
           G K   ++     ++
Sbjct: 309 GMKETQEMIDFAAKH 323

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 99/261 (37%), Gaps = 33/261 (12%)
Query: 42  IKVVCTSLCRSD--ITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99
           +KV    +C +D  +   E  +  P   GHE  GIV   G  V +   G  +       C
Sbjct: 52  VKVEACGICGTDRHLLHGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISC 111
Query: 100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA 159
             C QC++ + N C  L   R   +H D                    F+EY +V    A
Sbjct: 112 GRCPQCQAGRVNLCRNL---RAIGIHRD------------------GGFAEYVLVPRKQA 150
Query: 160 VKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS 219
            ++     L+ +               +++ I  GSTV I G G +GL   Q A+  GA+
Sbjct: 151 FEIPLT--LDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGAT 208
Query: 220 RIIGVDTNPEKCEKAKAFGVTEFLNPN--DNNEPVQQVIKRITDGGADYSFECIGDTGMI 277
            +I       K   A+  G T  ++P+  D  E +   +  +  GG D   EC    G+ 
Sbjct: 209 TVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVG-LVPGGVDVVIEC---AGVA 264
Query: 278 TTALQS--CCDGWGLAVTLGV 296
            T  QS       G  V LGV
Sbjct: 265 ETVKQSTRLAKAGGTVVILGV 285

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 97/252 (38%), Gaps = 27/252 (10%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR---IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE 98
           ++ +  + C SDI      AI  R   I GHEA G V  VG  V +F  G+ V+   I  
Sbjct: 29  VRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAI-- 86
Query: 99  CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT---RFSIKGKPVYHYCAVSSFSEYTVVH 155
                   +    T EV   +R    HS       +FS     V+      + ++  + H
Sbjct: 87  --------TPDWRTSEV---QRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH 135
Query: 156 SGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKA 215
                 +    PLE                  +A+I  G TV + G+G VGL    GA  
Sbjct: 136 ------LPKEIPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANH 188
Query: 216 RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 275
            GA RI  V +    C+ A  +G T+ +N   N + V+Q++K     G D      GD  
Sbjct: 189 LGAGRIFAVGSRKHCCDIALEYGATDIIN-YKNGDIVEQILKATDGKGVDKVVIAGGDVH 247
Query: 276 MITTALQSCCDG 287
               A++    G
Sbjct: 248 TFAQAVKMIKPG 259

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 130/341 (38%), Gaps = 55/341 (16%)
Query: 2   STSIKQPQVITCKAAVAWGAGQXXXXXXXXXXXXXXXXIRIKVVCTSLCRSDITAWETQ- 60
           STS+ +   +  KA  A+ A Q                ++I++    +C SD+    ++ 
Sbjct: 12  STSLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW 71
Query: 61  --AIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLG 117
              ++P + GHE  G V +VG  V ++  G+ V +   +  CK C +C+    N C    
Sbjct: 72  AGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC---- 127
Query: 118 LERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-------SSIAPLEK 170
                    D  T       P      +  +S+  VVH    +++       +++APL  
Sbjct: 128 ---------DHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPL-- 176
Query: 171 IXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 230
                          W      K   V I GLG +G+ +A    A GA  ++   T+  K
Sbjct: 177 --LCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAH---AMGA-HVVAFTTSEAK 230
Query: 231 CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT-------GMITTALQS 283
            E AKA G  E +N  + +E    +           SF+ I +T          TT L+ 
Sbjct: 231 REAAKALGADEVVNSRNADEMAAHL----------KSFDFILNTVAAPHNLDDFTTLLKR 280
Query: 284 CCDG-WGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323
             DG   L      P   PEV   + L +  R + GS+ GG
Sbjct: 281 --DGTMTLVGAPATPHKSPEV---FNLIMKRRAIAGSMIGG 316

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 98/242 (40%), Gaps = 43/242 (17%)
Query: 40  IRIKVVCTSLCRSDITAWETQ-----------AIFPRIFGHEASGIVESVGPGVTEFNEG 88
           + IK+    +C SD+   + +              P   GHE +G +E VG  V  +++G
Sbjct: 28  VLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKG 87
Query: 89  EHV-LTVFIGE--CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV 145
           + V +  + GE  C  CR  +    ++   LG+   G                       
Sbjct: 88  DLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDG----------------------- 124
Query: 146 SSFSEYTVV-HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGT 204
            +++EY +V H     K+  ++ +E                    D SK + VVI   G 
Sbjct: 125 -AYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSK-TLVVIGAGGG 182
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-G 263
           +G    Q AKA   + IIGVD   E  E AK  G    +N + + +PV + I+RIT G G
Sbjct: 183 LGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINAS-SQDPVSE-IRRITQGKG 240
Query: 264 AD 265
           AD
Sbjct: 241 AD 242

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 101/243 (41%), Gaps = 36/243 (14%)
Query: 40  IRIKVVCTSLCRSDITAW---ETQAIF--PRIFGHEASGIVESVGPGVTEFNEGEHVLTV 94
           + I++    +CR+D+  W   E +  F  P I GHE +G +  VG  + +  +G++V+  
Sbjct: 31  VLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGE-LAKVKKGDNVVVY 89
Query: 95  FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
                 TCR C+  K N C                     K + +        FSEY +V
Sbjct: 90  ATWGDLTCRYCREGKFNIC---------------------KNQIIPGQTTNGGFSEYMLV 128
Query: 155 HSG-CAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGS--TVVIFGLGTVGLSVAQ 211
            S    VK++S++P+E                  +  ISK +   V++ G+G + +   Q
Sbjct: 129 KSSRWLVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQ 188
Query: 212 GAKARGAS-RIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE 269
             KA   +  I+G+  + +  + A   G        D     + +I ++TDG GA  + +
Sbjct: 189 ILKALMKNITIVGISRSKKHRDFALELGADYVSEMKD----AESLINKLTDGLGASIAID 244
Query: 270 CIG 272
            +G
Sbjct: 245 LVG 247

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
           +A+I  G TV + G+G VGL    GA   GA RI  V +    C+ A  +G T+ +N   
Sbjct: 161 LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIIN-YK 219
Query: 248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDG--WGLAVTLGVPKLKPEVAA 305
           N + V+Q++K     G D      GD      A++    G   G    LG     P   +
Sbjct: 220 NGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRS 279
Query: 306 HYGLFLSGRTLKGSLFGGWKPKTD-LPSLVN 335
            +G+ +  + + G L  G + + + L SL++
Sbjct: 280 EWGVGMGHKHIHGGLTPGGRVRMEKLASLIS 310

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 94/271 (34%), Gaps = 51/271 (18%)
Query: 40  IRIKVVCTSLCRSDITAWETQAI----------FPRIFGHEASGIVESVGPGVT------ 83
           I IKV    +C SD+   +T             FP   GHE SG+V   GP         
Sbjct: 58  IIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNK 117
Query: 84  EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYC 143
            F  GE V       C  CR C     N CE L            +  F++ G       
Sbjct: 118 RFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENL-----------NELGFNVDG------- 159
Query: 144 AVSSFSEYTVVHSGCAVKVSSIAPLEKIXX-----XXXXXXXXXXXXWNV-----ADISK 193
              +F+EY  V +  A    S+  LE +                   +N        I  
Sbjct: 160 ---AFAEYVKVDAKYA---WSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRP 213
Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 253
           G  VVI G G +GL+     K  GAS++I  + +  +   AK  G    ++P   N  V+
Sbjct: 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENF-VE 272
Query: 254 QVIKRITDGGADYSFECIGDTGMITTALQSC 284
            V+      GA    E  G   ++   ++  
Sbjct: 273 AVLDYTNGLGAKLFLEATGVPQLVWPQIEEV 303

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 89/231 (38%), Gaps = 30/231 (12%)
Query: 40  IRIKVVCTSLCRSDITAWETQ----AIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVF 95
           + I V  + +C +D+ AW          P + GHE +G+V  +G  V  +  G++    +
Sbjct: 33  LLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKW 92
Query: 96  I-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 154
           + G C  C  C+    + C           H+D              Y    SF +Y   
Sbjct: 93  LNGSCMACEYCELGNESNCP----------HADLSG-----------YTHDGSFQQYATA 131
Query: 155 HSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGL-GTVGLSVAQGA 213
            +  A  +     L ++                 A++  G  V I G  G +G    Q A
Sbjct: 132 DAVQAAHIPQGTDLAQVAPILCAGITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYA 190
Query: 214 KARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGA 264
           KA G  R++G+D    K E  ++ G   F++     + V  V+K  TDGGA
Sbjct: 191 KAMG-YRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKA-TDGGA 239

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 42  IKVVCTSLCRSDITAWETQAIFPR--IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99
           +KVV T++C SD   +  + I P+  + GHE +G V   G  V   + G+ V   F   C
Sbjct: 37  LKVVSTNICGSDQHIYRGRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVAC 96
Query: 100 KTCRQCKSDKSNTCE 114
             CR CK  +S+ CE
Sbjct: 97  GRCRNCKEARSDVCE 111

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
           +A+I  G TV + G+G VGL    GA   GA RI  V +    C+ A  +G T+ +N   
Sbjct: 161 LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK- 219
Query: 248 NNEPVQQVIKRITDGGAD 265
           N + V+Q++K     G D
Sbjct: 220 NGDIVEQILKATDGKGVD 237

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 6/150 (4%)
Query: 116 LGLERRGVMHS--DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXX 173
           LG E  GV+ +  D+ TRF +  +  Y    + ++SE  V+     VK++     E+   
Sbjct: 61  LGAEGAGVVEAVGDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAA 120
Query: 174 XXXXXXXXXXXXWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
                            +  G  ++     G VG    Q AKA GA ++IG  ++PEK  
Sbjct: 121 LMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAA 179
Query: 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG 262
            AKA G  E +  + ++E V + +  +TDG
Sbjct: 180 HAKALGAWETI--DYSHEDVAKRVLELTDG 207

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 80/200 (40%), Gaps = 10/200 (5%)
Query: 42  IKVVCTSLCRSD--ITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGEC 99
           +KVV T++C SD  +    T A    + GHE +G V   G  V     G+ V   F   C
Sbjct: 38  LKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVAC 97
Query: 100 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA 159
             CR CK   +  C  +   R G  +          G+  Y     + F+   +     A
Sbjct: 98  GRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA 157
Query: 160 V-KVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA 218
           + K+  +  L  I                 A +  GSTV + G G VGL+ A  A+  GA
Sbjct: 158 MEKIRDLTCLSDILPTGYHGAV-------TAGVGPGSTVYVAGAGPVGLAAAASARLLGA 210
Query: 219 SRIIGVDTNPEKCEKAKAFG 238
           + +I  D NP +   AKA G
Sbjct: 211 AVVIVGDLNPARLAHAKAQG 230

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 92/255 (36%), Gaps = 70/255 (27%)
Query: 64  PRIFGHEASGIVESVGPGVTEFNEGEHVLTV----FIGECKTCRQ---CKSDKSNTCEVL 116
           P + G EASG V + G GVT F  G+ V  +    F    K   Q    K  K  + E L
Sbjct: 64  PYVLGREASGTVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEEL 123
Query: 117 GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXX 176
            L   G++       F+      YH                                   
Sbjct: 124 KLYAAGLLQVLTALSFT---NEAYH----------------------------------- 145
Query: 177 XXXXXXXXXWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK 235
                         + KG  V++F   G VGL + Q  K +GA   I V +  EK + AK
Sbjct: 146 --------------VKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAK 190
Query: 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG-DTGMITTA-------LQSCCDG 287
            +G  E+L      + ++QV+K     G D SF+ +G DT  I+ A         S  + 
Sbjct: 191 EYG-AEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNA 249
Query: 288 WGLAVTLGVPKLKPE 302
            GL     + +L P+
Sbjct: 250 SGLIPPFSITRLSPK 264

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 94/260 (36%), Gaps = 50/260 (19%)
Query: 40  IRIKVVCTSLCRSDITAWETQAIFPRI------FGHEASGIVESVGPGVTEFNEGEHVLT 93
           + + V  T +C SD+  W+   I P I       GHE++G V +V P V     G+ V  
Sbjct: 43  VTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAI 102
Query: 94  VFIGECKTCRQCKSDKSNTCE---------VLGLERRGVMHSDQQTRFSIKGKPVYHYCA 144
                C  C  C + + N CE         V GL RR V H            P      
Sbjct: 103 EPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNH------------PAVWCHK 150
Query: 145 VSSFSEYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGT 204
           + + S      +G  ++  S+A                      A +  G  V+I G G 
Sbjct: 151 IGNMS----YENGAMLEPLSVA----------------LAGLQRAGVRLGDPVLICGAGP 190
Query: 205 VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF---GVTEFLNPNDNNEPVQQVIKRITD 261
           +GL     AKA GA  ++  D +  + + AK      VT  +      E  +++++    
Sbjct: 191 IGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGG 250
Query: 262 GGADYSFECIGDTGMITTAL 281
                + EC G    I  A+
Sbjct: 251 IEPAVALECTGVESSIAAAI 270

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 95/255 (37%), Gaps = 41/255 (16%)
Query: 40  IRIKVVCTSLCRSDITAWETQAI------FPRIFGHEASGIVESVGPGVTEFNEGEHVLT 93
           + +K+    +C SD+  W+   I       P + GHEASG V  VG  V     G+ V  
Sbjct: 33  VLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAI 92
Query: 94  VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS----SFS 149
                 +T   CK  + N                          P   +CA      +  
Sbjct: 93  QPGAPRQTDEFCKIGRYNL------------------------SPTIFFCATPPDDGNLC 128
Query: 150 EYTVVHSGCAVKVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVGLSV 209
            +   ++    K+      E+                  A ++ G+ V++ G G +GL  
Sbjct: 129 RFYKHNANFCYKLPDNVTFEE--GALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVN 186
Query: 210 AQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN-PNDNNEPVQQVIKRITDGGADYSF 268
              AKA GA++++  D +  +  KAK  G    L   N++ E + + ++ +     + + 
Sbjct: 187 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGLLGSKPEVTI 246
Query: 269 ECIGDTGMITTALQS 283
           EC G    + T++Q+
Sbjct: 247 ECTG----VETSIQA 257

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 112/295 (37%), Gaps = 32/295 (10%)
Query: 40  IRIKVVCTSLCRSDITAW---ETQAIFPRIFGHEASGIVESVGPGVTEFN-----EGEHV 91
           I ++++   +C SD+  +   + +   P I GHE +G V  V     + N      G+ +
Sbjct: 45  ILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLI 104
Query: 92  LTVFIGECKTCRQCKSDKSNTC----EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS 147
           +      C  C  CK  K        +V G+ R                 P    C    
Sbjct: 105 VWNRGITCGECYWCKVSKEPYLCPNRKVYGINR------------GCSEYPHLRGC---- 148
Query: 148 FSEYTVVHSGCAV-KVSSIAPLEKIXXXXXXXXXXXXXXWNVADISKGSTVVIFGLGTVG 206
           +S + V+     V KVS    L+ +                  +   G TVVI G G +G
Sbjct: 149 YSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLG 208
Query: 207 LSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN-EPVQQVIKRITDG-GA 264
           L     A++ GA  +I +  +P + + A+  G    LN  + + E  ++ I  IT G GA
Sbjct: 209 LFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGA 268
Query: 265 DYSFECIGDTGMITTALQSCCDGWGLAVT-LGVPKLKPEVAAHYGLFLSGRTLKG 318
           D+  E  GD+  +    +    G   +V  + VP+       +  L L   T KG
Sbjct: 269 DFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKG 323

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	353
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	0.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	0.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	1e-179
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	1e-178
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	1e-178
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-145
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-118
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	1e-70
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-59
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-56
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	4e-56
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	7e-55
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-54
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-53
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	4e-53
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-50
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-49
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	3e-48
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	7e-48
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	2e-46
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-42
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	3e-42
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	4e-41
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	5e-41
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	2e-40
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-35
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	5e-35
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-31
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	6e-29
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	2e-26
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	3e-25
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	6e-25
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-24
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	6e-23
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	3e-22
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	3e-22
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	5e-22
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	5e-22
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	1e-21
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-21
3gms_A	340	Putative NADPH:quinone reductase; structural genom	2e-21
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	2e-21
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	3e-21
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	4e-21
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	9e-20
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-17
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	3e-17
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	3e-16
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	3e-16
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-15
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	5e-15
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-14
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	3e-14
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	7e-14
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	4e-12
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	3e-11
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-10
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	8e-09
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	7e-08
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	5e-04
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	1e-06
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	3e-06
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	5e-06
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	7e-06
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	8e-06
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	8e-06
3c85_A	183	Putative glutathione-regulated potassium-efflux S	9e-06
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	1e-05
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	2e-05
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	6e-05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	8e-05
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	1e-04
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	1e-04
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	1e-04
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	2e-04
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	3e-04
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	3e-04
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	3e-04
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	7e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  507 bits (1308), Expect = 0.0
 Identities = 156/335 (46%), Positives = 219/335 (65%), Gaps = 3/335 (0%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPR 65
           +VI CKAAVAW AG+PL +EE+EV PP+  E+RIK++ T++C +D         +  FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I GH  +GIVESVG GVT+   G+ V+ ++I +C  C+ C + K+N C+ + + +   + 
Sbjct: 63  ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
            D  +RF+ KGK + HY   S+FSEYTVV      K+  +APL+K+CLL CG+S G GAA
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 182

Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            N A +  GS   +FGLG VGL+V  G K  GASRIIGVD N +K  +AK FG TE +NP
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINP 242

Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A 
Sbjct: 243 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIAT 302

Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                ++GRT KG+ FGGWK    +P LV+ Y+ K
Sbjct: 303 RPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 337

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  505 bits (1303), Expect = 0.0
 Identities = 150/338 (44%), Positives = 206/338 (60%), Gaps = 8/338 (2%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRI 66
           +VI CKAA+AW  G PL +EE+EV+PP+  E+RI+V+ T +C +DI A +   +A+FP +
Sbjct: 5   KVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVV 64

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RG 122
            GHE +GIVESVGPGVT F  G+ V+  F  +CK C+ C S  +N C  L   +      
Sbjct: 65  LGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQ 124

Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGL 182
            +  D+ +RF+ KG+ +YH+  VSSFS+YTVV      +V   A LE++CL+ CG S+G 
Sbjct: 125 ELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGY 184

Query: 183 GAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
           GAA N A ++ GST  +FGLG VGLS   G K  GASRII +D N EK  KAKA G T+ 
Sbjct: 185 GAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC 244

Query: 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 302
           LNP + ++PVQ VI  +T GG DYS +C G    +  A+     GWG    +G      E
Sbjct: 245 LNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK--VDE 302

Query: 303 VAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +       + GR++ G+ FGGWK    +P+LV+ Y  K
Sbjct: 303 MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  500 bits (1289), Expect = e-179
 Identities = 155/335 (46%), Positives = 213/335 (63%), Gaps = 4/335 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRI 66
           +VI CKAAV W   +P  +EEVEV PP+  E+RIK+V T +CRSD            P I
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMH 125
            GHEA+GIVES+G GVT    G+ V+ +F  +C  CR CK  + N C    L   RG M 
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM- 123

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
            D  +RF+ +GKP++H+   S+FS+YTVV      K+ + +PLEK+CL+ CG S G G+A
Sbjct: 124 QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSA 183

Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD N +K  KAK  G TE +NP
Sbjct: 184 VKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNP 243

Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
            D  +P+Q+V+  +++GG D+SFE IG    + TAL  C + +G++V +GVP     ++ 
Sbjct: 244 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSM 303

Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 304 NPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  499 bits (1286), Expect = e-178
 Identities = 161/335 (48%), Positives = 222/335 (66%), Gaps = 4/335 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET---QAIFPR 65
           +VI CKAAVAW A +PLV+EE+EV+ P   EIRIK++ T +C +D+        +  FP 
Sbjct: 5   KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPV 64

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           + GHE +GIVESVGPGVTEF  GE V+ +FI +C  CR C+S K+N C          + 
Sbjct: 65  VLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM 124

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
           S ++TRF+ KG+ V  +   S+FS+YTVV+     K+   APL+ +CLL CG+S G GAA
Sbjct: 125 SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAA 184

Query: 186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
            N A +  GST  +FGLG VGL+   G  + GA RII VD NP+K EKAK FG T+F+NP
Sbjct: 185 VNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNP 244

Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
           ND++EP+ QV+ ++T+GG D+S EC+G+ G++  AL+SC  GWG++V +G   L  +VA 
Sbjct: 245 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-DVAT 303

Query: 306 HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                ++GRT KGS+FGG+K K  +P +V  YL K
Sbjct: 304 RPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 338

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  498 bits (1285), Expect = e-178
 Identities = 150/342 (43%), Positives = 209/342 (61%), Gaps = 7/342 (2%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-- 58
           M T     + ITCKAAVAW   +PL +E + V PP+  E+RIK++ + +C SD +  +  
Sbjct: 1   MCT---AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEI 57

Query: 59  TQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGL 118
             + FP I GHEA G+VES+G GVT    G+ V+ +F+ +C +CR CKS  SN CE   +
Sbjct: 58  IPSKFPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDM 117

Query: 119 ERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGL 178
             +  + +D  +RF+ +GKP+Y+    S+F+EYTVV      K+   APLE  CL+ CG 
Sbjct: 118 GAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGF 176

Query: 179 SAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
           + G GAA N A ++ GST  +FGLG VG S   G KA GASRIIGV T+ +K  KA   G
Sbjct: 177 ATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELG 236

Query: 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298
            TE LNP D ++P+ +VI   T+GG DY+ EC G    +  ALQS   G G+ V LG+  
Sbjct: 237 ATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLAS 296

Query: 299 LKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
               +     L L+GR+LKGS+FGG+K + ++  LV+ Y+KK
Sbjct: 297 PNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 337

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  414 bits (1067), Expect = e-145
 Identities = 105/338 (31%), Positives = 158/338 (46%), Gaps = 11/338 (3%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI--FPRI 66
           ++    AAV    G    ++ +++  PQ +E+ +KVV T +C +D+   + +     P +
Sbjct: 3   ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAV 62

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE-VLGLERRGVMH 125
            GHE SGI+E++GP VTE   G+HV+  + G C  C QC +     C    G    G   
Sbjct: 63  LGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD- 120

Query: 126 SDQQTRFSIKGKPVY--HYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
           S+         + V   H+ A SSF+ Y +      VKV+   P+E +  L CG+  G G
Sbjct: 121 SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAG 180

Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
           A  N   ++  S+ V +G G VGLS    AK  GAS II VD    + E AK  G T  +
Sbjct: 181 ACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI 240

Query: 244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV 303
           N     +     IK ITDGG +++ E  G   ++   + +     G    +G P+L    
Sbjct: 241 NSKT--QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTA 297

Query: 304 AAH-YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
                 L L G+T+ G + G   PK  +P LV  Y + 
Sbjct: 298 QFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQG 335

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  345 bits (888), Expect = e-118
 Identities = 76/343 (22%), Positives = 127/343 (37%), Gaps = 29/343 (8%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIF 67
           +   A V     QPLV +E E++      I ++++   +C SD+  +     +   P I 
Sbjct: 16  LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 75

Query: 68  GHEASGIVESVGPGVT-----EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
           GHE +G V  V              G+ ++      C  C  CK  K          R+ 
Sbjct: 76  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYL---CPNRKV 132

Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAG 181
              +   + +        H      +S + V+      +KVS    L+ + +  C  +  
Sbjct: 133 YGINRGCSEYP-------HL--RGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATA 183

Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
             A     +   G TVVI G G +GL     A++ GA  +I +  +P + + A+  G   
Sbjct: 184 YHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADL 243

Query: 242 FLNPND-NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 299
            LN  + + E  ++ I  IT G GAD+  E  GD+  +    +    G G     GV   
Sbjct: 244 TLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVP 302

Query: 300 KPEVA--AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           +  V    +  L L   T KG         +     V+   + 
Sbjct: 303 QDPVPFKVYEWLVLKNATFKGIWVSDT---SHFVKTVSITSRN 342

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  222 bits (569), Expect = 1e-70
 Identities = 79/328 (24%), Positives = 121/328 (36%), Gaps = 31/328 (9%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI-----FPRIFG 68
           KA      G   VV ++    P P EI +KV    LC SDI   +  A       P   G
Sbjct: 2   KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61

Query: 69  HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
           HE  G V  +G GVT F  G+ V       C  C  C   + N C               
Sbjct: 62  HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCT-------------- 107

Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWN 187
             R +  G       +  S +EY +V S   +     + P+    L   GL+     +  
Sbjct: 108 --RAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISRV 165

Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 247
           +  +  GST V+ G+G +G    Q  +A  A+R+I VD + ++   A+  G    +    
Sbjct: 166 LPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA 225

Query: 248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH 306
                   I+ +T G GA   F+ +G    I TA Q      G    +G+          
Sbjct: 226 G---AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGAHAKVG- 280

Query: 307 YGLFLSGRTLKGSLFGGWKPKTDLPSLV 334
           + +   G ++    +G      +L  +V
Sbjct: 281 FFMIPFGASVVTPYWGTRS---ELMEVV 305

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  194 bits (494), Expect = 4e-59
 Identities = 67/333 (20%), Positives = 125/333 (37%), Gaps = 42/333 (12%)

Query: 14  KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPRI 66
           KAA      +PL +E+V+        ++ +++    +C +D+   +       Q   P  
Sbjct: 17  KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 76

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHE  G +E V  GV    +G+ V+        TC  C++ +   CE           +
Sbjct: 77  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCE-----------N 125

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC----LLSCGLSAGL 182
            +    +I G           F+E+        +K+      EK+     L   G++A  
Sbjct: 126 LEFPGLNIDG----------GFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYR 175

Query: 183 GAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
                   +  G+ V I G+G +G    Q  K    + +I +D   EK + A+  G    
Sbjct: 176 AVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHV 235

Query: 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP-KLKP 301
           ++   +  PV+QV++     G + + + +G    +           G  + +G   +L+ 
Sbjct: 236 VDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGGELRF 292

Query: 302 EVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLV 334
                  +  S  + +GSL G      +L  LV
Sbjct: 293 PTI---RVISSEVSFEGSLVG---NYVELHELV 319

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  187 bits (476), Expect = 2e-56
 Identities = 76/319 (23%), Positives = 117/319 (36%), Gaps = 47/319 (14%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAIFPRIFGHEA 71
           KA      G  + V  V +  P P+++ +KV    +C +D  +   E  +  P   GHE 
Sbjct: 25  KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTPPVTLGHEF 83

Query: 72  SGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCE---VLGLERRGVMHSD 127
            GIV   G  V +   G  + T      C  C QC++ + N C     +G+ R G     
Sbjct: 84  CGIVVEAGSAVRDIAPGARI-TGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDG----- 137

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSAGLGA 184
                               F+EY +V    A ++              L+C L      
Sbjct: 138 -------------------GFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL-----H 173

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
             +++ I  GSTV I G G +GL   Q A+  GA+ +I       K   A+  G T  ++
Sbjct: 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVD 233

Query: 245 PNDNNEPVQQVIKRITDG---GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP 301
           P+     V + I         G D   EC G    +  + +    G G  V LGV     
Sbjct: 234 PSA--GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGE 290

Query: 302 EVA-AHYGLFLSGRTLKGS 319
           +V    + +      + GS
Sbjct: 291 KVEIEPFDILFRELRVLGS 309

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  185 bits (472), Expect = 4e-56
 Identities = 84/323 (26%), Positives = 126/323 (39%), Gaps = 54/323 (16%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI------FPRIF 67
            A +    G    + EV+V  P P E+ IKV+ TS+C +D+  +E           P+I 
Sbjct: 6   VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKSDKSNTCE---VLGLER 120
           GHE +G V  +GPGV     G++V      E    C  C  C+  + + C+   + G++ 
Sbjct: 66  GHEVAGEVVEIGPGVEGIEVGDYV----SVETHIVCGKCYACRRGQYHVCQNTKIFGVDT 121

Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCG 177
            G                         F+EY VV +    K     P E   L   L   
Sbjct: 122 DG------------------------VFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNA 157

Query: 178 LSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
           +   L           G +V+I G G +GL     AKA GA  +I  + +  + E AK  
Sbjct: 158 VDTVLAG------PISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV 211

Query: 238 GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
           G    +NP +  E V + +  ITDG G D   E  G    +   LQ+     G    LG+
Sbjct: 212 GADYVINPFE--EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGL 268

Query: 297 PKLKPEVAAHYGLFLSGRTLKGS 319
              K  +  +  +     T+ G 
Sbjct: 269 YPGKVTIDFNNLIIFKALTIYGI 291

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  182 bits (464), Expect = 7e-55
 Identities = 73/319 (22%), Positives = 120/319 (37%), Gaps = 47/319 (14%)

Query: 14  KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWETQAI--FPRIFGHE 70
           K+ V    G  + V E  +      +E+R+K+  + LC SD+          +P   GHE
Sbjct: 2   KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHE 60

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGE-CKTCRQCKSDKSNTCE---VLGLERRGVMHS 126
            SG +++VG GV + + G+ V        C TC +C     + C     +G  R G    
Sbjct: 61  FSGYIDAVGSGVDDLHPGDAV-ACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDG---- 115

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSAGLG 183
                                F+EY VV       + +  P+E       ++ GL     
Sbjct: 116 --------------------GFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL----- 150

Query: 184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
            A+++A   +   V+I G GT+GL   Q A A GA  +  +D + EK   AK+FG  +  
Sbjct: 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTF 210

Query: 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK--LK 300
           N ++      Q+   + +        E  G    +  A++           +G     L 
Sbjct: 211 NSSE--MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLH 267

Query: 301 PEVAAHYGLFLSGRTLKGS 319
              A    +     T+ GS
Sbjct: 268 LTSATFGKILRKELTVIGS 286

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  181 bits (462), Expect = 1e-54
 Identities = 83/322 (25%), Positives = 127/322 (39%), Gaps = 53/322 (16%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI------FPRIF 67
           +A       + L + +  V  P P EI ++V   S+C +D+  W+  A        P + 
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKSDKSNTCE---VLGLER 120
           GHE SG+VE+VGPGV     G+HV      E    C  C  C++   + C    +LG++R
Sbjct: 62  GHEFSGVVEAVGPGVRRPQVGDHV----SLESHIVCHACPACRTGNYHVCLNTQILGVDR 117

Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCG 177
            G                         F+EY VV +  A       P E   +       
Sbjct: 118 DG------------------------GFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNA 153

Query: 178 LSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
           +               G +V+I G G +GL  A   +A GA  I+  D NP +   A+ +
Sbjct: 154 V-----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY 208

Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
                +NP +  E + +V++R+T  G +   E  G+   I   L +   G G A  LG+P
Sbjct: 209 A-DRLVNPLE--EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIP 264

Query: 298 KLKPEVAAHYGLFLSGRTLKGS 319
                      L + G T  G 
Sbjct: 265 SDPIRFDLAGELVMRGITAFGI 286

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  178 bits (454), Expect = 2e-53
 Identities = 71/338 (21%), Positives = 131/338 (38%), Gaps = 44/338 (13%)

Query: 12  TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-----TQAIFPRI 66
             KAA+     +PL +E+V +  PQ EE+ I++    +CR+D+  W+          P I
Sbjct: 3   KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPII 62

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGV 123
            GHE +G +  VG  + +  +G++V+        TCR C+  K N C+   + G    G 
Sbjct: 63  LGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNG- 120

Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSC-GLSA-- 180
                                   FSEY +V S   +   +     +   L+  G ++  
Sbjct: 121 -----------------------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMG 157

Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGV 239
            +  A           V++ G+G + +   Q  KA   +  I+G+  + +  + A   G 
Sbjct: 158 AIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGA 217

Query: 240 TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298
                  D     + +I ++TDG GA  + + +G         +      G  + +G+  
Sbjct: 218 DYVSEMKD----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEG 272

Query: 299 LKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336
            +  + A +   +  + L GS +G      D+  L   
Sbjct: 273 KRVSLEA-FDTAVWNKKLLGSNYGSLNDLEDVVRLSES 309

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  177 bits (452), Expect = 4e-53
 Identities = 71/338 (21%), Positives = 127/338 (37%), Gaps = 50/338 (14%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-----------TQAI 62
           +A      G+PL ++E+ V  P+  ++ IKV    +C SD+   +               
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 63  FPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLE 119
            P   GHE +G +E VG  V  +++G+ V          C  C+  + + C+    LG+ 
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121

Query: 120 RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 179
             G                        +++EY +V     +         +   L+C   
Sbjct: 122 FDG------------------------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTC--- 154

Query: 180 AGLGA--AWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
           +G+    A   A +    T+++ G  G +G    Q AKA   + IIGVD   E  E AK 
Sbjct: 155 SGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214

Query: 237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV 296
            G    +N +  + P+ ++ +     G D   +       ++   ++     G  V +G+
Sbjct: 215 AGADYVINASMQD-PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGL 272

Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLV 334
                   A   + LS     GSL G    ++D   ++
Sbjct: 273 FGADLHYHA-PLITLSEIQFVGSLVG---NQSDFLGIM 306

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  172 bits (438), Expect = 1e-50
 Identities = 75/341 (21%), Positives = 109/341 (31%), Gaps = 66/341 (19%)

Query: 14  KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWETQAI---------- 62
             +  W   + + VEEV      +P EI IKV    +C SD+   +T             
Sbjct: 32  LGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTG 90

Query: 63  FPRIFGHEASGIVESVGPGVTE------FNEGEHVLTVFIGECKTCRQCKSDKSNTCE-- 114
           FP   GHE SG+V   GP          F  GE V    +  C  CR C     N CE  
Sbjct: 91  FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENL 150

Query: 115 -VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-------SSIA 166
             LG    G                        +F+EY  V +  A  +           
Sbjct: 151 NELGFNVDG------------------------AFAEYVKVDAKYAWSLRELEGVYEGDR 186

Query: 167 PLEKICL---LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIG 223
                 L    S   +A          I  G  VVI G G +GL+     K  GAS++I 
Sbjct: 187 LFLAGSLVEPTSVAYNA---VIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVIL 243

Query: 224 VDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ 282
            + +  +   AK  G    ++P    E   + +   T+G GA    E  G   ++   ++
Sbjct: 244 SEPSEVRRNLAKELGADHVIDP--TKENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIE 301

Query: 283 SCCD----GWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS 319
                          +     K  +       +    + GS
Sbjct: 302 EVIWRARGINATVAIVARADAKIPLTGEV-FQVRRAQIVGS 341

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  167 bits (426), Expect = 3e-49
 Identities = 67/301 (22%), Positives = 112/301 (37%), Gaps = 49/301 (16%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF------PRIF 67
            + V  G G  L +E   +  P P E+ +++    +C SD+  WE   I       P + 
Sbjct: 9   LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKSDKSNTCEVLGLERRGV 123
           GHEASG VE VG  V     G+ V      E     +    CK  + N      +     
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRV----AIEPGAPRENDEFCKMGRYNLSP--SIFFCAT 121

Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSA 180
              D        G          +   +   ++    K+      E+  L   LS G+  
Sbjct: 122 PPDD--------G----------NLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI-- 161

Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
               A     ++ G  V++ G G +G+     AKA GA++++  D +  +  KAK  G  
Sbjct: 162 ---HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD 218

Query: 241 EFLNPNDNNEPVQQVIKRITD---GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 297
             L  +   E  Q++ +++        + + EC G    I   + +   G G  V +G+ 
Sbjct: 219 LVLQISK--ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLG 275

Query: 298 K 298
            
Sbjct: 276 S 276

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  165 bits (420), Expect = 3e-48
 Identities = 77/321 (23%), Positives = 123/321 (38%), Gaps = 47/321 (14%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF------PRIF 67
            +AV +     L +E+  +  P+ +E+ +++    +C SD+  +E   I       P + 
Sbjct: 6   LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64

Query: 68  GHEASGIVESVGPGVTEFNEGEHVL---TVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
           GHEASG V  VG  V    +G+ V     V    C+ C+ CK  K N C    L      
Sbjct: 65  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVP---CRRCQFCKEGKYNLCP--DLTFCATP 119

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL---LSCGLSAG 181
             D        G          + + Y V  +    K+     LE+  L   LS G+   
Sbjct: 120 PDD--------G----------NLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV--- 158

Query: 182 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
              A   A +  G+TV++ G G +GL     AKA GA  ++    +P + E AK  G   
Sbjct: 159 --HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADV 215

Query: 242 FLNPNDNNEPVQQVIKRITDG---GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 298
            L  +   E    +I+RI        + + +C G+   IT  +     G G  + +G+  
Sbjct: 216 TLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGS 274

Query: 299 LKPEVAAHYGLFLSGRTLKGS 319
               V            +K  
Sbjct: 275 QMVTVPLVN-ACAREIDIKSV 294

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  164 bits (417), Expect = 7e-48
 Identities = 67/317 (21%), Positives = 112/317 (35%), Gaps = 50/317 (15%)

Query: 1   MSTSIKQPQ--VITCKAAVAWGAGQPLVVEEVEVNP-PQPEEIRIKVVCTSLCRSDITAW 57
           M++S  +    V T      W +     +E V+     +  E+ + V  T +C SD+  W
Sbjct: 1   MASSASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFW 60

Query: 58  ETQAIF------PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGE----CKTCRQCKS 107
           +   I         + GHE++G V +V P V     G+ V      E    C  C  C +
Sbjct: 61  KHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRV----AIEPQVICNACEPCLT 116

Query: 108 DKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 167
            + N CE   ++                G              Y    +    K+ ++  
Sbjct: 117 GRYNGCE--RVDFLSTPPVP--------G----------LLRRYVNHPAVWCHKIGNM-S 155

Query: 168 LEKICL---LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV 224
            E   +   LS  L     A    A +  G  V+I G G +GL     AKA GA  ++  
Sbjct: 156 YENGAMLEPLSVAL-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVIT 210

Query: 225 DTNPEKCEKAKAFGVTEFLNPNDNN---EPVQQVIKRITDGGADYSFECIGDTGMITTAL 281
           D +  + + AK        +  +     E  +++++         + EC G    I  A+
Sbjct: 211 DIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAI 270

Query: 282 QSCCDGWGLAVTLGVPK 298
            +   G G    +GV K
Sbjct: 271 WAVKFG-GKVFVIGVGK 286

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  160 bits (407), Expect = 2e-46
 Identities = 72/332 (21%), Positives = 120/332 (36%), Gaps = 34/332 (10%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TAWE--TQAIFPRIFGHE 70
           K       G+ +   E E   P P +  ++ +  + C SDI T +E         I GHE
Sbjct: 2   KGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHE 60

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
           A G V  VG  V +F  G+ V+   I       + +         +              
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGML----AGWKFSNV- 115

Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVH--SGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
                G           F E+  V+        +    PLE   ++   ++ G   A   
Sbjct: 116 ---KDG----------VFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAEL- 161

Query: 189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 248
           A+I  G TV + G+G VGL    GA   GA RI  V +    C+ A  +G T+ +N  + 
Sbjct: 162 ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN- 220

Query: 249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA--- 304
              + + I + TDG G D      GD      A++    G  +   +        +    
Sbjct: 221 -GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGN-VNYLGEGDNIDIPR 278

Query: 305 AHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336
           + +G+ +  + + G L  G   +  +  L++ 
Sbjct: 279 SEWGVGMGHKHIHGGLCPG--GRLRMERLIDL 308

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  150 bits (381), Expect = 1e-42
 Identities = 73/321 (22%), Positives = 126/321 (39%), Gaps = 37/321 (11%)

Query: 12  TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIF 67
           T K  + + +   L  +++ V  P+  E+ I V  + +C +D+ A    W      P + 
Sbjct: 5   TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64

Query: 68  GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
           GHE +G+V  +G  V  +  G++  +    G C  C  C+    + C             
Sbjct: 65  GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCP-----------H 113

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG--A 184
              + ++  G          SF +Y    +  A  +     L ++  + C   AG+    
Sbjct: 114 ADLSGYTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPILC---AGITVYK 160

Query: 185 AWNVADISKGSTVVIFGLGTVGL-SVA-QGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
           A   A++  G  V I G    GL S+A Q AKA G  R++G+D    K E  ++ G   F
Sbjct: 161 ALKSANLMAGHWVAISGAAG-GLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVF 218

Query: 243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 302
           ++     + V  V+K  TDGGA            I  + +      G  V +G+P     
Sbjct: 219 IDFTKEKDIVGAVLK-ATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAGAKC 276

Query: 303 VAAHYGLFLSGRTLKGSLFGG 323
            +  +   +   ++ GS  G 
Sbjct: 277 CSDVFNQVVKSISIVGSYVGN 297

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  148 bits (377), Expect = 3e-42
 Identities = 85/319 (26%), Positives = 125/319 (39%), Gaps = 37/319 (11%)

Query: 12  TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIF 67
             KAAV    G PL ++EV V  P P ++++K+  + +C +D+ A    W  +   P I 
Sbjct: 2   MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIP 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
           GHE  G V +VG GV+   EG+ V +      C  C  C       CE            
Sbjct: 62  GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCE-----------K 110

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-- 184
            Q T +S+ G           + EY V        +       +I  + C   AG+    
Sbjct: 111 QQNTGYSVNG----------GYGEYVVADPNYVGLLPDKVGFVEIAPILC---AGVTVYK 157

Query: 185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
              V D   G  VVI G+G +G    Q A+A G  R+  VD +  K   A+  G    +N
Sbjct: 158 GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVN 216

Query: 245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 304
             D + P   + K I  GGA             + A+     G G     G+P       
Sbjct: 217 ARDTD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGDFGTP 272

Query: 305 AHYGLFLSGRTLKGSLFGG 323
             + + L G T++GS+ G 
Sbjct: 273 I-FDVVLKGITIRGSIVGT 290

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  146 bits (371), Expect = 4e-41
 Identities = 64/330 (19%), Positives = 102/330 (30%), Gaps = 50/330 (15%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF------PRIF 67
           KA          VV E     P+  E  ++ +   +C +D                  + 
Sbjct: 2   KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHV-LTVFIGE-CKTCRQCKSDKSNTCEVLGLERRGVMH 125
           GHEA G+V  V P  TE  EG+ V  TV       T    + D+ +              
Sbjct: 62  GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAP----------- 108

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK----VSSIAPLEKICLLSCGLSA- 180
                 +  +G    H       SE+        V+     + +  L  I  +S    A 
Sbjct: 109 ---DGMYFERGIVGAH----GYMSEFFTSPEKYLVRIPRSQAELGFL--IEPISITEKAL 159

Query: 181 GLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA--RGASRIIGV---DTNPEKCEKAK 235
               A   A     S+  + G G++GL      K   +G   +  +   D      +  +
Sbjct: 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE 219

Query: 236 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG 295
               T   +     E V  V         D+ +E  G       ++Q+     G+   LG
Sbjct: 220 ELDATYVDSRQTPVEDVPDVY-----EQMDFIYEATGFPKHAIQSVQALAPN-GVGALLG 273

Query: 296 VPK----LKPEVAAHYGLFLSGRTLKGSLF 321
           VP          A H  + L  + L GS+ 
Sbjct: 274 VPSDWAFEVDAGAFHREMVLHNKALVGSVN 303

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  145 bits (369), Expect = 5e-41
 Identities = 85/318 (26%), Positives = 128/318 (40%), Gaps = 39/318 (12%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITA----WETQAIFPRIFGH 69
           KAAV     +PL ++EVE       E+ +++    +C +D+ A    W  +   P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 70  EASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
           E  GIVE VGPGVT    G+ V +      C  C  C S +   CE             +
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCE-----------HQK 110

Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN- 187
              +S+ G           ++EY    +   VK+      E+   + C   AG+   +  
Sbjct: 111 NAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFC---AGV-TTYKA 156

Query: 188 --VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 245
             V     G  V I+G+G +G    Q AKA G   ++ VD   EK E AK  G    +NP
Sbjct: 157 LKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP 215

Query: 246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA 305
               E   + +K    GG   +           +A  S   G G  V +G+P  +  +  
Sbjct: 216 LK--EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPI 271

Query: 306 HYGLFLSGRTLKGSLFGG 323
            +   L+G  + GS+ G 
Sbjct: 272 -FDTVLNGIKIIGSIVGT 288

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  145 bits (367), Expect = 2e-40
 Identities = 54/331 (16%), Positives = 103/331 (31%), Gaps = 52/331 (15%)

Query: 14  KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWE--------TQAIFP 64
           KA +       + V++V+        +I+I+ +   +C +D              +    
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61

Query: 65  RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
            + GHEA G+VE    G ++   G+ V+ V    C  CR C   + + CE       G+ 
Sbjct: 62  LVLGHEAIGVVEESYHGFSQ---GDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIH 118

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK----VSSIA----PL---EKICL 173
             D        G             E+        VK    +  I     PL   EK   
Sbjct: 119 KMD--------G----------FMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSIE 160

Query: 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
               +   +              V++ G G +G+      +  G    +     P + E+
Sbjct: 161 EILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQ 220

Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG-DTGMITTALQSCCDGWGLAV 292
                     N  +++    ++  + + G  D   +  G D  ++   +       G+  
Sbjct: 221 TVIEETK--TNYYNSSNGYDKL--KDSVGKFDVIIDATGADVNILGNVIPLLGRN-GVLG 275

Query: 293 TLGVPKLKPEVAAHYG----LFLSGRTLKGS 319
             G       V   Y     +  + +T+ G 
Sbjct: 276 LFGFST-SGSVPLDYKTLQEIVHTNKTIIGL 305

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  133 bits (336), Expect = 1e-35
 Identities = 70/282 (24%), Positives = 111/282 (39%), Gaps = 45/282 (15%)

Query: 14  KAAVAWGAGQPLVVEEVE----VNP---PQPEEIRIKVVCTSLCRSDITAW----ETQAI 62
           +  V  G+G+ + V++++     +P        + +KVV T++C SD         T A 
Sbjct: 4   RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQ--HMVRGRTTAQ 60

Query: 63  FPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
              + GHE +G V   G  V     G+ V   F   C  CR CK   +  C  +   R G
Sbjct: 61  VGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAG 120

Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFS----EYTVV---HSGCAVKV----SSIAPLEKI 171
                            Y Y  +  ++    EY +V        +K+     ++  +  +
Sbjct: 121 GA---------------YGYVDMGDWTGGQAEYVLVPYADFNL-LKLPDRDKAMEKIRDL 164

Query: 172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC 231
             LS  L  G   A   A +  GSTV + G G VGL+ A  A+  GA+ +I  D NP + 
Sbjct: 165 TCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL 223

Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
             AKA G        D   P+ + I  +      D + + +G
Sbjct: 224 AHAKAQGFEIADLSLD--TPLHEQIAALLGEPEVDCAVDAVG 263

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  131 bits (331), Expect = 5e-35
 Identities = 67/279 (24%), Positives = 107/279 (38%), Gaps = 39/279 (13%)

Query: 14  KAAVAWGAGQPLVVEEVE----VNP--PQPEEIRIKVVCTSLCRSD------ITAWETQA 61
           K+ V  G    L VE V      +        + +KVV T++C SD              
Sbjct: 4   KSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPK-- 60

Query: 62  IFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 121
               + GHE +G V   G  V   + G+ V   F   C  CR CK  +S+ CE   +   
Sbjct: 61  --GHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPD 118

Query: 122 GVMHSDQQTRFSIKGKPVYHYCAVS-SFSEYTVVH--SGCAVKV----SSIAPLEKICLL 174
             +           G   +     S   +EY +V       +K      ++  ++ + L+
Sbjct: 119 ADL-----------GAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLI 167

Query: 175 SCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234
           S  L  G     + A +  GS V I G G VG   A GA+  GA+ +I  D NPE+ +  
Sbjct: 168 SDILPTGFHGCVS-AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLL 226

Query: 235 KAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
              G    ++  + + P++  I +I      D   + +G
Sbjct: 227 SDAGFET-IDLRN-SAPLRDQIDQILGKPEVDCGVDAVG 263

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  120 bits (303), Expect = 3e-31
 Identities = 74/308 (24%), Positives = 114/308 (37%), Gaps = 44/308 (14%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIFGHEASGIVESVGP 80
           L + E  V      +I ++ +  SL   D             FP +   + SG+VE+VG 
Sbjct: 41  LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGK 100

Query: 81  GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVY 140
            VT F  G+ V++ F        +  + ++   E LG    GV                 
Sbjct: 101 SVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGV----------------- 143

Query: 141 HYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN----VADISKGST 196
                   SEY V+  G  V         +   L C   AGL  AW        +  G  
Sbjct: 144 -------LSEYVVLPEGWFVAAPKSLDAAEASTLPC---AGL-TAWFALVEKGHLRAGDR 192

Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI 256
           VV+ G G V L   Q AKA GA  +I   ++ EK ++A A G    +N  +  E   + +
Sbjct: 193 VVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLE--EDWVERV 249

Query: 257 KRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGLFLSGR 314
             +T   GAD+  E  G    +  +L++     G    +GV +  +        L L   
Sbjct: 250 YALTGDRGADHILEIAG-GAGLGQSLKAVAPD-GRISVIGVLEGFEVSGPVGP-LLLKSP 306

Query: 315 TLKGSLFG 322
            ++G   G
Sbjct: 307 VVQGISVG 314

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  113 bits (285), Expect = 6e-29
 Identities = 66/274 (24%), Positives = 109/274 (39%), Gaps = 46/274 (16%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE----TQAIFPRIF 67
           +A V    G P  L V ++ V  P P+E+R+++   +L   D+   +     +   P + 
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE---VLGLERRGVM 124
           G + SG+V++VGPGV  F  G+ V+      C  C +C + + N C    +LG  R G  
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGT- 120

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
                                  ++EY V+              E+   +       L  
Sbjct: 121 -----------------------YAEYVVLPEANLAPKPKNLSFEEAAAIPL---TFL-T 153

Query: 185 AWN----VADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
           AW        +  G  V++      V ++  Q AK  GA R+I    + +K  +AKA G 
Sbjct: 154 AWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGA 212

Query: 240 TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
            E +N         + ++R+T G GAD   +  G
Sbjct: 213 DETVNYTH--PDWPKEVRRLTGGKGADKVVDHTG 244

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  108 bits (271), Expect = 2e-26
 Identities = 65/363 (17%), Positives = 112/363 (30%), Gaps = 75/363 (20%)

Query: 7   QPQVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDI--------- 54
                   A +      P   + +++V V    P E  + V+ +S+  + +         
Sbjct: 37  HKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLS 96

Query: 55  -----------TAWETQAIFP-RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTC 102
                      +    +   P  + G + +G+V   GPGV  +  G+ V+   +      
Sbjct: 97  TFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELES 156

Query: 103 RQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162
               +D     E                   I G            +E  +V S   +  
Sbjct: 157 SDGHNDTMLDPE-----------------QRIWGFETNF----GGLAEIALVKSNQLMPK 195

Query: 163 SSIAPLEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR 216
                 E+             A     + N A + +G  V+I+G  G +G    Q A A 
Sbjct: 196 PDHLSWEEAAAPGL---VNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG 252

Query: 217 GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ---------------QVIKRITD 261
           GA   I V ++P+K E  +A G    ++ N                      + I+ +T 
Sbjct: 253 GA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTG 311

Query: 262 G-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGLFLSGRTLKGS 319
           G   D  FE  G       ++     G G   T         E    Y L++S + + GS
Sbjct: 312 GEDIDIVFEHPGR-ETFGASVFVTRKG-GTITTCASTSGYMHEYDNRY-LWMSLKRIIGS 368

Query: 320 LFG 322
            F 
Sbjct: 369 HFA 371

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  103 bits (260), Expect = 3e-25
 Identities = 77/345 (22%), Positives = 129/345 (37%), Gaps = 62/345 (17%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA--- 56
           MS S ++   +      A      L            E++R KV+   +C SD+ +    
Sbjct: 5   MSKSPEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKND 64

Query: 57  WETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEV 115
           W   +++P + GHE  G V  VG  V + N G+ V +   +G C +C  C +D  N C  
Sbjct: 65  WG-FSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCP- 122

Query: 116 LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS--------FSEYTVVHSGCAVKVSSIAP 167
                                K +  Y ++          +S + V +    ++     P
Sbjct: 123 ---------------------KMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMP 161

Query: 168 LEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRII 222
           L+    L C   AG+        + +     G  + I GLG +G    + AKA G+ ++ 
Sbjct: 162 LDGGAPLLC---AGITVYSPLKYFGLD--EPGKHIGIVGLGGLGHVAVKFAKAFGS-KVT 215

Query: 223 GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMIT 278
            + T+P K E+A K FG   FL   D  +     ++         + + I DT       
Sbjct: 216 VISTSPSKKEEALKNFGADSFLVSRDQEQ-----MQAAAG-----TLDGIIDTVSAVHPL 265

Query: 279 TALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323
             L       G  + +G P+   E+ A + L    + + GS  GG
Sbjct: 266 LPLFGLLKSHGKLILVGAPEKPLELPA-FSLIAGRKIVAGSGIGG 309

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  103 bits (258), Expect = 6e-25
 Identities = 76/344 (22%), Positives = 131/344 (38%), Gaps = 61/344 (17%)

Query: 2   STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET-- 59
           STS+ +   +  KA  A+ A QPL   ++    P P +++I++    +C SD+    +  
Sbjct: 12  STSLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEW 71

Query: 60  -QAIFPRIFGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLG 117
              ++P + GHE  G V +VG  V ++  G+ V +   +  CK C +C+    N C+   
Sbjct: 72  AGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCD--- 128

Query: 118 LERRGVMHSDQQTRFSIKGKPVYHYCAVSS---------FSEYTVVHSGCAVKV-SSIAP 167
                                   Y + +          +S+  VVH    +++      
Sbjct: 129 -------------------HMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQ 169

Query: 168 LEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRII 222
           L  +  L C   AG+        W       G  V + G+G +G    + A A GA  ++
Sbjct: 170 LAAVAPLLC---AGITTYSPLRHWQA---GPGKKVGVVGIGGLGHMGIKLAHAMGA-HVV 222

Query: 223 GVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITT 279
              T+  K E AKA G  E +N  + +E     +          SF+ I +T        
Sbjct: 223 AFTTSEAKREAAKALGADEVVNSRNADE-----MAAHLK-----SFDFILNTVAAPHNLD 272

Query: 280 ALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323
              +     G    +G P    +    + L +  R + GS+ GG
Sbjct: 273 DFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG 316

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  103 bits (258), Expect = 1e-24
 Identities = 50/361 (13%), Positives = 99/361 (27%), Gaps = 70/361 (19%)

Query: 5   IKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI---------- 54
           ++       K        + L + EV +    P+E+ + V+ +S+  + +          
Sbjct: 30  LRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPT 89

Query: 55  -----------TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCR 103
                                 + G + SG+V   G GV  +  G+HV+ V         
Sbjct: 90  FHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQE 148

Query: 104 QCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 163
                                           G            +EY VV +   +   
Sbjct: 149 PATHGDGMLGT----------------EQRAWGFETNFG----GLAEYGVVRASQLLPKP 188

Query: 164 SIAPLEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARG 217
           +    E+  +          A     +   A + +G  V+I+G  G +G    Q  K  G
Sbjct: 189 AHLTWEEAAVSPL---CAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGG 245

Query: 218 ASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN----------------EPVQQVIKRITD 261
               + V ++ +K    +A G    +N  +                    + +++     
Sbjct: 246 G-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAG 304

Query: 262 GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 321
              D  FE  G       ++     G  +                Y L++  + + GS  
Sbjct: 305 REPDIVFEHTGR-VTFGLSVIVARRGGTVVTCGSSSGYLHTFDNRY-LWMKLKKIVGSHG 362

Query: 322 G 322
            
Sbjct: 363 A 363

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score = 96.9 bits (242), Expect = 6e-23
 Identities = 76/330 (23%), Positives = 122/330 (36%), Gaps = 54/330 (16%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA---WETQAIFPRI 66
           +  K    +   +     +   +   P ++ I ++   +C SDI +A   W+ + I+P I
Sbjct: 3   VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWK-EGIYPMI 61

Query: 67  FGHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
            GHE +GI++ VG GV +F  G+ V +  F+  CK C+ CK  +   C            
Sbjct: 62  PGHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT----------- 110

Query: 126 SDQQTRFSIKGKPVYHYCAVSS--FSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
              +  F+      +H        +S   VV     + V   APLEK+  L C   AG+ 
Sbjct: 111 ---KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLC---AGIT 164

Query: 184 A-----AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
                    V   +KG+ V + G G +G    + A A GA  +     N  K + A + G
Sbjct: 165 TYSPLKFSKV---TKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMG 220

Query: 239 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITTALQSCCDGWGLAVTLG 295
           V  F                          + I  T                 G    +G
Sbjct: 221 VKHFY---------------TDPKQCKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVG 265

Query: 296 VPK--LKPEVAAHYGLFLSGRTLKGSLFGG 323
           +P   + P ++    + L  R + GSL GG
Sbjct: 266 LPPVEVAPVLSVFDFIHLGNRKVYGSLIGG 295

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 95.5 bits (238), Expect = 3e-22
 Identities = 58/356 (16%), Positives = 101/356 (28%), Gaps = 93/356 (26%)

Query: 10  VITCKAAVAWGAGQP---LVVEEVEVNPPQPE--EIRIKVVCTSLCRSDI---------- 54
           +IT +A +    G+P   L  +  E++       E+ +K + + +  SDI          
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60

Query: 55  ---TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSN 111
              T            G+E    V  VG  V+    G+ V+   +               
Sbjct: 61  PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG------------ 108

Query: 112 TCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 171
                                              ++  + + +    +K+ + A  +  
Sbjct: 109 -----------------------------------TWRTHALGNDDDFIKLPNPAQSKAN 133

Query: 172 CLLSCGLSAGLGAAWNV------------ADISKGSTVVIF--GLGTVGLSVAQGAKARG 217
              + GL+   GA  +V              ++ G    I   G   VG   +Q  K   
Sbjct: 134 GKPN-GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN 192

Query: 218 ASRIIGV----DTNPEKCEKAKAFGVTEFLNPNDNNEP-VQQVIKRITD---GGADYSFE 269
               I V        E     K  G T+ +  + NN       IK       G A  +  
Sbjct: 193 F-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALN 251

Query: 270 CIGDTGMITTALQSCCDGWGLAVTLGVP-KLKPEVAAHYGLFLSGRTLKGSLFGGW 324
           C+G  G  +T +    +  GL +T G        +     +F    T  G      
Sbjct: 252 CVG--GKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIF-KNFTSAGFWVTEL 304

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score = 95.0 bits (237), Expect = 3e-22
 Identities = 70/334 (20%), Positives = 120/334 (35%), Gaps = 62/334 (18%)

Query: 12  TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA---WETQAIFPRIF 67
                 A      L      +    PE++ I+++C  +C +D+          + +P + 
Sbjct: 9   KTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLG-MSNYPMVP 67

Query: 68  GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
           GHE  G V  VG  V++F  G+ V +   +G C  C  C+ D    C             
Sbjct: 68  GHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCP------------ 115

Query: 127 DQQTRFSIKGKPVYHYCAVSS--------FSEYTVVHSGCAVKVSSIAPLEKICLLSCGL 178
                     K ++ Y  V          F++ TVVH    VK+     +E+   L C  
Sbjct: 116 ----------KKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLC-- 163

Query: 179 SAGLGA-----AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
            AG+        + +     G    I GLG VG    + AKA G   +  + ++ +K E+
Sbjct: 164 -AGVTVYSPLSHFGLK--QPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREE 219

Query: 234 A-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITTALQSCCDGWG 289
           A +  G  +++  +D  +     +  + D     S + + DT           S     G
Sbjct: 220 ALQDLGADDYVIGSDQAK-----MSELAD-----SLDYVIDTVPVHHALEPYLSLLKLDG 269

Query: 290 LAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323
             + +GV     +      L L  + + GS  G 
Sbjct: 270 KLILMGVINNPLQFLT-PLLMLGRKVITGSFIGS 302

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 94.2 bits (235), Expect = 5e-22
 Identities = 76/337 (22%), Positives = 120/337 (35%), Gaps = 85/337 (25%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSL------CRS 52
           M  +I +      K  +    G    +  E+  V     EE+ IK   T +       R 
Sbjct: 1   MKCTIPE----QQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRK 56

Query: 53  DITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT 112
            I   E     P + G EASG V + G GVT F  G+ V                     
Sbjct: 57  GIYPCE----KPYVLGREASGTVVAKGKGVTNFEVGDQVA-------------------- 92

Query: 113 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCAVKVSSIAPLEKI 171
                                        Y + S+F++Y+ + S G  +K+      E++
Sbjct: 93  -----------------------------YISNSTFAQYSKISSQGPVMKLPKGTSDEEL 123

Query: 172 CLLSCGLSAGLGA---AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227
            L + GL   L A         + KG  V++F   G VGL + Q  K +GA   I V + 
Sbjct: 124 KLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVAST 182

Query: 228 PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQS--C 284
            EK + AK +G    +N +  +  + + + + T+G G D SF+ +G      T   S   
Sbjct: 183 DEKLKIAKEYGAEYLINASKED--ILRQVLKFTNGKGVDASFDSVGK----DTFEISLAA 236

Query: 285 CDGWGLAVTLG-----VPKLKPEVAAHYGLFLSGRTL 316
               G+ V+ G     +P       +   + L    L
Sbjct: 237 LKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQL 273

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 94.2 bits (235), Expect = 5e-22
 Identities = 65/275 (23%), Positives = 104/275 (37%), Gaps = 65/275 (23%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPR 65
            AAV    G P   V EEV+V  P P ++R++     +       R+ I         P 
Sbjct: 3   MAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           + G EA+ +VE VGPGVT+F  GE V                                  
Sbjct: 63  VVGFEAAAVVEEVGPGVTDFTVGERV---------------------------------- 88

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
                              + ++S+  +  +   +KV     L+ + L    L  G+ A 
Sbjct: 89  -------------CTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLK-GMTAQ 134

Query: 186 WNVAD---ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
           + +     +  G  V+I    G +G  +   A+  GA  +IG  +  EK E A+  G   
Sbjct: 135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHH 193

Query: 242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIG-DT 274
            +N +  +    +V++ IT G G D  ++ IG DT
Sbjct: 194 TINYSTQD--FAEVVREITGGKGVDVVYDSIGKDT 226

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 93.6 bits (233), Expect = 1e-21
 Identities = 55/342 (16%), Positives = 95/342 (27%), Gaps = 64/342 (18%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIF---PRIFGHE 70
            A       +  V           +++ ++V   ++  SD      +  F       G +
Sbjct: 13  TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAFLGTD 69

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
            +G V +VG  VT    G+ V                                  ++   
Sbjct: 70  YAGTVVAVGSDVTHIQVGDRVYG------------------------------AQNEMCP 99

Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK------------ICLLSCGL 178
           R   +G          +FS+YTV       K+      E+            + +   GL
Sbjct: 100 RTPDQG----------AFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGL 149

Query: 179 SAGLGAAWNVADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 237
                +A      SK   V+++G  T       Q  +  G    I    +P   + AK+ 
Sbjct: 150 PLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT-CSPHNFDLAKSR 207

Query: 238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWG-LAVTLGV 296
           G  E  +       + Q I+  T     Y+ +CI +    T    +     G        
Sbjct: 208 GAEEVFDYRA--PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPF 265

Query: 297 PKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYL 338
           P+           +  G T+ G       P     S   R  
Sbjct: 266 PEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEERQF 307

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 93.1 bits (232), Expect = 1e-21
 Identities = 63/322 (19%), Positives = 104/322 (32%), Gaps = 77/322 (23%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPR 65
                   G P  L   E     P   EI+++     +       RS +    +    P 
Sbjct: 3   TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPS---LPS 59

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
             G EA+GIV  VG GV     G+ V                                  
Sbjct: 60  GLGTEAAGIVSKVGSGVKHIKAGDRV---------------------------------- 85

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGA 184
                        VY   A+ ++S    + +  A  + ++I+  +       GL+     
Sbjct: 86  -------------VYAQSALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTV-YYL 131

Query: 185 AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
                +I      +     G VGL   Q AKA GA ++IG     +K + A   G  + +
Sbjct: 132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVI 190

Query: 244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQS--CCDGWGLAVTLG----- 295
             N   E + + +K IT G      ++ +G      T  +S  C    GL V+ G     
Sbjct: 191 --NYREEDLVERLKEITGGKKVRVVYDSVGR----DTWERSLDCLQRRGLMVSFGNSSGA 244

Query: 296 VPKLKPEV-AAHYGLFLSGRTL 316
           V  +   +      L+++  +L
Sbjct: 245 VTGVNLGILNQKGSLYVTRPSL 266

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 93.0 bits (232), Expect = 2e-21
 Identities = 51/269 (18%), Positives = 94/269 (34%), Gaps = 62/269 (23%)

Query: 14  KAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRI 66
           K       G P   L VE   + P +  E+ ++++   +  SD+     A+  +   P I
Sbjct: 6   KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNI 65

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            G+E  GIVE+VG  V+    G+                         VL L   G    
Sbjct: 66  PGYEGVGIVENVGAFVSRELIGKR------------------------VLPLRGEG---- 97

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAA 185
                               ++ EY    +   V +  SI       +    L+A     
Sbjct: 98  --------------------TWQEYVKTSADFVVPIPDSIDDFTAAQMYINPLTA-WVTC 136

Query: 186 WNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 244
               ++ +   +++      +G   AQ ++     R+I V  N +  E+    G    ++
Sbjct: 137 TETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVID 195

Query: 245 PNDNNEPVQQVIKRITDG-GADYSFECIG 272
            +    P+ + +  +T+G GAD + + IG
Sbjct: 196 TST--APLYETVMELTNGIGADAAIDSIG 222

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score = 93.0 bits (232), Expect = 2e-21
 Identities = 65/348 (18%), Positives = 106/348 (30%), Gaps = 70/348 (20%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI-TA--- 56
           MS     P+     A  +    +     + +  P    +I IK+    +C SDI  A   
Sbjct: 1   MSY----PEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGH 56

Query: 57  WETQAIFPRIFGHEASGIVESVGPGV-TEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCE 114
           W      P + GHE  G V  +GP   +    G+ V +   +  C  C +CK+D    C 
Sbjct: 57  WG-NMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT 115

Query: 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSS--------FSEYTVVHSGCAVKVSSIA 166
                                 K V  Y             ++ Y  VH    V +    
Sbjct: 116 ----------------------KFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENI 153

Query: 167 PLEKICLLSCGLSAGLGA-----AWNVADISKGSTVVIFGLGTVG-LSVAQGAKARGASR 220
           P      L C    GL                G  V I GLG +G +     +KA GA  
Sbjct: 154 PSHLAAPLLC---GGLTVYSPLVRNGC---GPGKKVGIVGLGGIGSMGT-LISKAMGA-E 205

Query: 221 IIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT-----G 275
              +  +  K E A   G   ++   +  +  +             +F+ I         
Sbjct: 206 TYVISRSSRKREDAMKMGADHYIATLEEGDWGE---------KYFDTFDLIVVCASSLTD 256

Query: 276 MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 323
           +    +       G  V++ +P+    ++      L   ++  S  G 
Sbjct: 257 IDFNIMPKAMKVGGRIVSISIPEQHEMLSL-KPYGLKAVSISYSALGS 303

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score = 91.9 bits (229), Expect = 3e-21
 Identities = 62/336 (18%), Positives = 104/336 (30%), Gaps = 79/336 (23%)

Query: 14  KAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFP 64
           +A V    G P   + ++ +E+   +  ++R+K++   +  SDI     Q         P
Sbjct: 28  RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDI--NMIQGNYGLLPELP 85

Query: 65  RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
            + G+E    V +VG  VT    G+ V+    G                  LG       
Sbjct: 86  AVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAG------------------LG------- 120

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
                                 ++    V      ++V S  PL+     +  L      
Sbjct: 121 ----------------------TWRTEAVFSEEALIQVPSDIPLQS----AATLGVNPCT 154

Query: 185 AWN----VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AK 235
           A+        +  G +V+       VG +V Q A A G  R I V  +    +K     K
Sbjct: 155 AYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLK 213

Query: 236 AFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTL 294
           + G    +   +      ++     D      +  C+G  G  +T L       G  VT 
Sbjct: 214 SLGAEHVITEEE--LRRPEMKNFFKDMPQPRLALNCVG--GKSSTELLRQLARGGTMVTY 269

Query: 295 GVP-KLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD 329
           G   K     +    +F     L+G     WK    
Sbjct: 270 GGMAKQPVVASVSLLIF-KDLKLRGFWLSQWKKDHS 304

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 91.5 bits (228), Expect = 4e-21
 Identities = 61/273 (22%), Positives = 98/273 (35%), Gaps = 66/273 (24%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPR 65
           K       G P  L   + E   P P+ + ++     L       RS +         P 
Sbjct: 3   KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPF---LPS 59

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
             G E +G+VE+VG  VT F  G+ V                                  
Sbjct: 60  GLGAEGAGVVEAVGDEVTRFKVGDRV---------------------------------- 85

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGA 184
                         Y    + ++SE  V+     VK+  S++  +   L+  GL+     
Sbjct: 86  -------------AYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTV-QYL 131

Query: 185 AWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 243
                 +  G  ++     G VG    Q AKA GA ++IG  ++PEK   AKA G  E +
Sbjct: 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETI 190

Query: 244 NPNDNNEPVQQVIKRITDG-GADYSFECIG-DT 274
             + ++E V + +  +TDG      ++ +G DT
Sbjct: 191 --DYSHEDVAKRVLELTDGKKCPVVYDGVGQDT 221

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 88.1 bits (219), Expect = 9e-20
 Identities = 43/328 (13%), Positives = 81/328 (24%), Gaps = 67/328 (20%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIFGHEASGIVESVGP 80
           L    + V  P P ++ IKV   S+  SD+      +    +  R  G E  G + + G 
Sbjct: 37  LEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGD 96

Query: 81  GV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPV 139
               +   G+ V                         GL   G                 
Sbjct: 97  EPYAKSLVGKRV---------------------AFATGLSNWG----------------- 118

Query: 140 YHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV---ADISKGST 196
                  S++EY V  +   + +      E        +      A  +           
Sbjct: 119 -------SWAEYAVAEAAACIPLLDTVRDED----GAAMIVNPLTAIAMFDIVKQEGEKA 167

Query: 197 VVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQV 255
            V+      +   +   AK  G  R I      E+    K  G    LN        +  
Sbjct: 168 FVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKA--PDFEAT 224

Query: 256 IKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSG 313
           ++ +          + +    + +    +        +  G       V    G L    
Sbjct: 225 LREVMKAEQPRIFLDAVTGP-LASAIFNAMPKR-ARWIIYGRLDPDATVIREPGQLIFQH 282

Query: 314 RTLKGSLFGGWKPKTDLPSLVNRYLKKV 341
           + ++G     W  +          + + 
Sbjct: 283 KHIEGFWLSEWMRQF--KERRGPAILEA 308

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 58/361 (16%), Positives = 99/361 (27%), Gaps = 98/361 (27%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE----TQAIFPRIF 67
           +A V  G G    L +    +  PQ  E++I+V    L   D+   +         P + 
Sbjct: 5   RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVP 64

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           G E SGIVE++G  V  +  G+                         V+           
Sbjct: 65  GFECSGIVEALGDSVKGYEIGD------------------------RVMAFVNYN----- 95

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA-- 185
                              +++E          K+               +S    AA  
Sbjct: 96  -------------------AWAEVVCTPVEFVYKIPD------------DMSFSEAAAFP 124

Query: 186 ------WN----VADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 234
                 +     VA++ +G +V++    G VG +VAQ         + G  +   K E  
Sbjct: 125 MNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS-TFKHEAI 183

Query: 235 KAFGVTEFLNPNDNNEPVQQVIKRITDGGAD---------Y---SFECIGDTG-MITTAL 281
           K        +  D N    Q +KRI+  G D                 +   G  I    
Sbjct: 184 KDSVT----HLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLKPLGTYILYGS 239

Query: 282 QSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR-TLKGSLFGGWKPKTDLPSLVNRYLKK 340
            +   G   +              +          + G        K     L+   ++K
Sbjct: 240 SNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEK 299

Query: 341 V 341
           +
Sbjct: 300 L 300

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 81.2 bits (201), Expect = 3e-17
 Identities = 54/280 (19%), Positives = 94/280 (33%), Gaps = 67/280 (23%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----A 56
             + +++   +              +  +  V  P   ++ ++     +  SDI      
Sbjct: 20  FQSMMQK---LVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGR 76

Query: 57  WETQAIFPRIFGHEASGIVESVGPGVTE-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEV 115
           ++     P   G E  G V ++G   +  +  G+ V  +  G                  
Sbjct: 77  YDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQAVAYMAPG------------------ 118

Query: 116 LGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLS 175
                                          SF+EYTVV +  A  V S+ P E + LL 
Sbjct: 119 -------------------------------SFAEYTVVPASIATPVPSVKP-EYLTLLV 146

Query: 176 CGLSA--GLGAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
            G +A   L     +  +S+G  V++    G  G    Q +K      +IG  ++ EK  
Sbjct: 147 SGTTAYISLK---ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSA 202

Query: 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272
             K+ G    +  N   EPV  V+K+    G D  +E +G
Sbjct: 203 FLKSLGCDRPI--NYKTEPVGTVLKQEYPEGVDVVYESVG 240

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 78.0 bits (193), Expect = 3e-16
 Identities = 50/310 (16%), Positives = 91/310 (29%), Gaps = 100/310 (32%)

Query: 1   MSTSIKQPQVITCKAAVAWGAGQP--LVVE-EVEVNPPQPEEIRIKVVCTSLCRSDIT-- 55
           M+T  K  + +          G P  L +  ++ V  P+  ++ IKV    +   +    
Sbjct: 23  MATGQKLMRAVRVFEF-----GGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIR 77

Query: 56  --AWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC 113
              +  + + P   G + +G++E+VG   + F +G+ V T                    
Sbjct: 78  SGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRVFT-------------------- 117

Query: 114 EVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL 173
                   G                         ++EY +       K+           
Sbjct: 118 ---SSTISG------------------------GYAEYALAADHTVYKLPE--------- 141

Query: 174 LSCGLSAGLGAA--------W-NV---ADISKGSTVVIFG-LGTVGLSVAQGAKARGASR 220
               L    GAA        +  +   A +  G +V++ G  G VGL+  Q A+A G  +
Sbjct: 142 ---KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-K 197

Query: 221 IIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG----------GADY---S 267
           I+G     E  +     G  E  N  +        IK+                      
Sbjct: 198 ILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVGEKGIDIIIEMLANVNLSKD 255

Query: 268 FECIGDTGMI 277
              +   G +
Sbjct: 256 LSLLSHGGRV 265

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 77.2 bits (191), Expect = 3e-16
 Identities = 56/307 (18%), Positives = 96/307 (31%), Gaps = 77/307 (25%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDI--------TAWETQAIF 63
           KA      G P  L + +      +  ++ IKV   SL   D          A + +   
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67

Query: 64  PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
           P   G++ SG V  +G  V   N G+                        +V+G+     
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGD------------------------KVMGI----- 98

Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGL 182
                   F               ++EY          K+  ++ L+     +  L    
Sbjct: 99  ------AGFPDHP---------CCYAEYVCASPDTIIQKLEKLSFLQ-----AASLPTAG 138

Query: 183 GAAWNV---ADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
             A      A++ +G  V+I    G VG    Q AK +G   +I    +       KA G
Sbjct: 139 LTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITT-ASKRNHAFLKALG 196

Query: 239 VTEFLNPNDNNEPVQQVIKRITD------GGA--DYSFECIGDTG-MITTALQSCCDGWG 289
             + +N ++  E     I    D      GG     S +C+ +TG +++    +      
Sbjct: 197 AEQCINYHE--EDFLLAISTPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITAGRVIE 254

Query: 290 LAVTLGV 296
           +A     
Sbjct: 255 VAKQKHR 261

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 75.3 bits (186), Expect = 2e-15
 Identities = 57/320 (17%), Positives = 95/320 (29%), Gaps = 76/320 (23%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIF 67
           KA  A     P  LV  +VE     P  + + V    +C  D       ++ +   P + 
Sbjct: 23  KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVP 82

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           G E +G+V S   G +    G+                         V+     G     
Sbjct: 83  GIETAGVVRSAPEG-SGIKPGD------------------------RVMAFNFIG----- 112

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW- 186
                               ++E   V     +         +    +  L A     + 
Sbjct: 113 -------------------GYAERVAVAPSNILPTPPQLDDAE----AVALIANYHTMYF 149

Query: 187 ---NVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
                  +  G TV++ G  G +G +  Q AK  GA ++I V       E  K+ G    
Sbjct: 150 AYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIV 208

Query: 243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLG-----V 296
           L      E   + ++  T G G D   + IG       A+++     G  + +G     +
Sbjct: 209 LP---LEEGWAKAVREATGGAGVDMVVDPIGGP-AFDDAVRTLASE-GRLLVVGFAAGGI 263

Query: 297 PKLKPEVAAHYGLFLSGRTL 316
           P +K          L G   
Sbjct: 264 PTIKVNRLLLRNASLIGVAW 283

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 73.8 bits (182), Expect = 5e-15
 Identities = 39/292 (13%), Positives = 79/292 (27%), Gaps = 93/292 (31%)

Query: 14  KAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSL-------CRSDITAWETQAIF 63
           +    W        + +  V++     ++I ++     +        +++   W      
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWS----N 58

Query: 64  PRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEV---LGLER 120
             + G + +G++  VG  V     G                          V     L+R
Sbjct: 59  GHVPGVDGAGVIVKVGAKVDSKMLGR------------------------RVAYHTSLKR 94

Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSI-------APLEKIC 172
            G                        SF+E+TV+++   + +  ++        P     
Sbjct: 95  HG------------------------SFAEFTVLNTDRVMTLPDNLSFERAAALPC---- 126

Query: 173 LLSCGLSAGLGAAW---NVADISKGSTVVIFGLGTVGLSVA-QGAKARGASRIIGVDTNP 228
                    L  AW       ++K   V+I G G V  ++  Q     G   +  V +  
Sbjct: 127 -------PLL-TAWQAFEKIPLTKQREVLIVGFGAVN-NLLTQMLNNAGY-VVDLV-SAS 175

Query: 229 EKCEKAKAFGVTEFLN-PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITT 279
                A   GV      P+   +    +   +    A      +   G I  
Sbjct: 176 LSQALAAKRGVRHLYREPSQVTQKYFAIFDAVNSQNAAALVPSLKANGHIIC 227

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 58/281 (20%), Positives = 94/281 (33%), Gaps = 88/281 (31%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPR 65
           +       G P  +V+ +  +      E+ ++     + R DI   +        A    
Sbjct: 30  RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDA--SP 87

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I G E SG +  VGPGV+ +  G+                        +V GL   G   
Sbjct: 88  ILGLELSGEIVGVGPGVSGYAVGD------------------------KVCGLANGG--- 120

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
                                +++EY ++ +G  +                G  A   AA
Sbjct: 121 ---------------------AYAEYCLLPAGQILPFPK------------GYDAVKAAA 147

Query: 186 --------WN----VADISKGSTVVIFGLGT--VGLSVAQGAKARGASRIIGVDTNPEKC 231
                   W     +A +++G +V+I G GT  +G +  Q A+A GA  +     +  KC
Sbjct: 148 LPETFFTVWANLFQMAGLTEGESVLIHG-GTSGIGTTAIQLARAFGA-EVYATAGSTGKC 205

Query: 232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 272
           E  +  G    +N     E    VIK  T  G D   + IG
Sbjct: 206 EACERLGAKRGINYRS--EDFAAVIKAETGQGVDIILDMIG 244

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 71.9 bits (177), Expect = 3e-14
 Identities = 58/281 (20%), Positives = 90/281 (32%), Gaps = 86/281 (30%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDI------TAWETQAIFPRIF 67
            AAV   A  P V+ ++    P P ++ +++  +     D            Q   P I 
Sbjct: 9   IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQP-LPAIL 67

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           G + +G V +VGP V  F  G+                         V GL         
Sbjct: 68  GMDLAGTVVAVGPEVDSFRVGD------------------------AVFGLTGGV----- 98

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS----AGL- 182
                 ++G          + +++  V +          P          L+    + L 
Sbjct: 99  ----GGLQG----------THAQFAAVDARLLASK----PA--------ALTMRQASVLP 132

Query: 183 ---GAAW----NVADISKGSTVVIFGLGT--VGLSVA-QGAKARGASRIIGVDTNPEKCE 232
                AW    + A +  G TV+I G G   VG  VA Q A ARGA R+          E
Sbjct: 133 LVFITAWEGLVDRAQVQDGQTVLIQG-GGGGVG-HVAIQIALARGA-RVFAT-ARGSDLE 188

Query: 233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
             +  G T      D +   +      T G G D  ++ +G
Sbjct: 189 YVRDLGATPI----DASREPEDYAAEHTAGQGFDLVYDTLG 225

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 71.1 bits (174), Expect = 7e-14
 Identities = 34/286 (11%), Positives = 74/286 (25%), Gaps = 94/286 (32%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSDI------------------------------ 54
           L ++ ++   P P+E+ I++  + L  SD+                              
Sbjct: 20  LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG 79

Query: 55  --TAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT 112
              +   +       G+E +G+V   G            +    G               
Sbjct: 80  AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIGG--------------- 124

Query: 113 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKI 171
                                            + +S+Y  + +   + +     P +  
Sbjct: 125 ---------------------------------AMYSQYRCIPADQCLVLPEGATPADGA 151

Query: 172 CLLSCGLSAGLGAAWNVADISK---GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN 227
                 L+A       + +  +    S +V       +G  + Q     G  +++ +   
Sbjct: 152 SSFVNPLTA-----LGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRK 205

Query: 228 PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
            E+ +  KA G     N         Q +       GA  +F+  G
Sbjct: 206 QEQADLLKAQGAVHVCNAAS--PTFMQDLTEALVSTGATIAFDATG 249

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 65.3 bits (160), Expect = 4e-12
 Identities = 56/283 (19%), Positives = 88/283 (31%), Gaps = 90/283 (31%)

Query: 14  KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPR 65
            A      G P  L V+EV    P   E+ +KV  ++L R+D+   +        A    
Sbjct: 24  LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA--SN 81

Query: 66  IFGHEASGIVESVGPGV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
           I G EASG V  +GPG    +  G+                          + L   G  
Sbjct: 82  ILGLEASGHVAELGPGCQGHWKIGD------------------------TAMALLPGG-- 115

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
                                   ++Y  V  G  + +              GL+    A
Sbjct: 116 ----------------------GQAQYVTVPEGLLMPIPE------------GLTLTQAA 141

Query: 185 A--------WN----VADISKGSTVVIFGLGT--VGLSVAQGAKARGASRIIGVDTNPEK 230
           A        +     V ++  G  V+I   G   VG +  Q  +  GA   +    + +K
Sbjct: 142 AIPEAWLTAFQLLHLVGNVQAGDYVLIHA-GLSGVGTAAIQLTRMAGA-IPLVTAGSQKK 199

Query: 231 CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
            + A+  G     N     E   +   + T G G +   +CIG
Sbjct: 200 LQMAEKLGAAAGFNYKK--EDFSEATLKFTKGAGVNLILDCIG 240

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 49/273 (17%), Positives = 88/273 (32%), Gaps = 65/273 (23%)

Query: 23  QPLVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFPRIFGHEASGIVE 76
             L+  E+    P   +I ++V   S+       R       T     ++ G++A+GIV 
Sbjct: 38  ASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTD---WKVIGYDAAGIVS 94

Query: 77  SVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKG 136
           +VGP VT F  G+ V                          + R G              
Sbjct: 95  AVGPDVTLFRPGDEVFY---------------------AGSIIRPG-------------- 119

Query: 137 KPVYHYCAVSSFSEYTVVHSGC-AVKVSSIAPLEKICLLSCGLSA--GLGAAWNV--ADI 191
                     + +E+ +V       K  ++   E   L    ++A        +V     
Sbjct: 120 ----------TNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVP 169

Query: 192 SKGSTV-VIFGLGTVGLSVA-QGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 249
                + ++ G G VG S+A Q A+ R    +I   + PE  E  K+ G    +   D++
Sbjct: 170 GAAPAILIVGGAGGVG-SIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVI---DHS 225

Query: 250 EPVQQVIKRITDGGADYSFECIGDTGMITTALQ 282
           +P+   +  +  G   + F              
Sbjct: 226 KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIAD 258

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 57/314 (18%), Positives = 95/314 (30%), Gaps = 84/314 (26%)

Query: 14  KAAVAWGAGQPLV---VEEVEV-NPPQPEEIRIKVVCTSL------------------CR 51
            A V    G+  V    + + +     P E+ +KV   S+                   R
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 52  SDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSN 111
             +        FP   G + SG+V   G  V  F  G+ V                    
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWA------------------ 124

Query: 112 TCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC-AVKVSSIAPLEK 170
               +   ++G                        + SE+ VV     + K  S+   + 
Sbjct: 125 ---AVPPWKQG------------------------TLSEFVVVSGNEVSHKPKSLTHTQA 157

Query: 171 ICLLSCGLSAGLGAAWNVADI----SKGSTVVIFG-LGTVGLSVA-QGAKARGASRIIGV 224
             L    L+A   A   V  +      G  V+I G  G VG + A Q  KA  A  +  V
Sbjct: 158 ASLPYVALTA-WSAINKVGGLNDKNCTGKRVLILGASGGVG-TFAIQVMKAWDA-HVTAV 214

Query: 225 DTNPEKCEKAKAFGVTEFLNPND-NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQS 283
             + +  E  +  G  + +   D  +  V++ +K +     D+  + +G +         
Sbjct: 215 -CSQDASELVRKLGADDVI---DYKSGSVEEQLKSL--KPFDFILDNVGGSTETWAPDFL 268

Query: 284 CCDGWGLAVTLGVP 297
                   VTL  P
Sbjct: 269 KKWSGATYVTLVTP 282

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 55.3 bits (134), Expect = 8e-09
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 11/87 (12%)

Query: 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSL------CRSDITAWETQAIFP 64
          I  +       G       +++  P+  EI +K+   S+       R  +   +     P
Sbjct: 6  IGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRL-MDVSK----AP 60

Query: 65 RIFGHEASGIVESVGPGVTEFNEGEHV 91
          R+ G +A G+VESVG  VT FN+G+ V
Sbjct: 61 RVLGFDAIGVVESVGNEVTMFNQGDIV 87

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 52.1 bits (126), Expect = 7e-08
 Identities = 32/164 (19%), Positives = 53/164 (32%), Gaps = 27/164 (16%)

Query: 115 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLL 174
           + G+E  GV          ++G+           +E   V  G  + +      E+    
Sbjct: 58  IPGMEVVGV----------VEGRRYAALVPQGGLAERVAVPKGALLPLPEGLSPEE---- 103

Query: 175 SCGLSAGLGAAWNV---ADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEK 230
           +         A+     A    G  V++    G +G +  Q A+A G  R++   + PEK
Sbjct: 104 AAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEK 162

Query: 231 CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 273
                A G  E     +       V +R     G D   E  G 
Sbjct: 163 LALPLALGAEEAATYAE-------VPERAKAWGGLDLVLEVRGK 199

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 40.2 bits (95), Expect = 5e-04
 Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT----AWETQAIFPRIFGH 69
          KA V    G PL + ++     +  E+ ++V    L  +D      A+ T+   P I G 
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGM 61

Query: 70 EASGIVE 76
          E  G+VE
Sbjct: 62 EVVGVVE 68

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 34/230 (14%), Positives = 64/230 (27%), Gaps = 79/230 (34%)

Query: 25  LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTE 84
           LV E     P    E+RI +    +   D              G E +G+V   GPGVT 
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPGVASLGSEGAGVVVETGPGVTG 285

Query: 85  FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCA 144
              G+ V+ +                                                  
Sbjct: 286 LAPGDRVMGMIPK----------------------------------------------- 298

Query: 145 VSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS----AGLGAAW--------NVADIS 192
             +F    V       ++ +            G S    A +   +        ++A + 
Sbjct: 299 --AFGPLAVADHRMVTRIPA------------GWSFARAASVPIVFLTAYYALVDLAGLR 344

Query: 193 KGSTVVI-FGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 241
            G ++++    G VG++  Q A+  GA  +    +  +     +A  ++ 
Sbjct: 345 PGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASEDKW----QAVELSR 389

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A Length = 290

 Score = 47.2 bits (113), Expect = 3e-06
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
           T+ I GLG +G S+A G K      +I+G + +    + A   G+
Sbjct: 8   TIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI 52

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 46.5 bits (110), Expect = 5e-06
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
           G+ V + GLG VG+SVA+   A GA ++       +   +    G+ 
Sbjct: 155 GANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGME 200

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 Length = 279

 Score = 46.0 bits (110), Expect = 7e-06
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
           + + GLG +G S+A   + RG   +IGV      CEKA    +
Sbjct: 3   IGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQL 44

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* Length = 314

 Score = 46.1 bits (110), Expect = 8e-06
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
            V+I G+G +G S A+  +  G   +I G D NPE   KA   G+
Sbjct: 35  NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI 79

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 Length = 281

 Score = 45.6 bits (109), Expect = 8e-06
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGV 239
            V+I G+G +G S A+  +  G   +I G D NPE   KA   G+
Sbjct: 3   NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI 47

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Length = 183

 Score = 44.8 bits (106), Expect = 9e-06
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
           V+I G+G +G       +AR     +G++   E  ++ ++ G 
Sbjct: 42  VLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR 84

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} Length = 341

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 11/44 (25%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
            V I GLG +G S+ +   A     + G + +    + A   G 
Sbjct: 10  PVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGF 52

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 32/143 (22%), Positives = 54/143 (37%), Gaps = 22/143 (15%)

Query: 150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-------AW----NVADISKGSTVV 198
            + +       K+ +  P +        LS  LG        A+     V  +  G TV+
Sbjct: 97  THFISDGKGLEKLLTEWPDK------LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVL 150

Query: 199 IFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIK 257
           +    G VG  V Q AK +G  +++G   + EK    K  G     N    N  +++ +K
Sbjct: 151 VSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVN-SLEEALK 208

Query: 258 RITDGGADYSFECIGDTGMITTA 280
           + +  G D  F+ +G  G     
Sbjct: 209 KASPDGYDCYFDNVG--GEFLNT 229

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Length = 144

 Score = 41.5 bits (98), Expect = 6e-05
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)

Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
           K     + GLG  G S+ +     G   ++ VD N EK     ++ 
Sbjct: 5   KNKQFAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYA 49

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 43.0 bits (101), Expect = 8e-05
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 250
           T++ FG G     +++    +G  RIIG   NP++ E  +A G    L P +   
Sbjct: 7   TLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGEEPS 60

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Length = 141

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 10/42 (23%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 238
            ++ G    G+ + +   A G  +++ VD + EK E  +  G
Sbjct: 9   YIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEG 49

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
            G TV++ GLG VG S+A  A   GA +++  DT+ E+   A A G T
Sbjct: 174 DGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT 220

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 32/146 (21%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 150 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA-------AW----NVADISKGS--T 196
              ++      KV               LS  LGA       +         I+ GS  T
Sbjct: 111 TKVILDGNSLEKVDPQLVDGH-------LSYFLGAIGMPGLTSLIGIQEKGHITAGSNKT 163

Query: 197 VVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQ 254
           +V+ G  G  G    Q     G SR++G+    EKC    +  G    +N     + V +
Sbjct: 164 MVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKK--DNVAE 221

Query: 255 VIKRITDGGADYSFECIGDTGMITTA 280
            ++     G D  F+ +G  G I+  
Sbjct: 222 QLRESCPAGVDVYFDNVG--GNISDT 245

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 8/44 (18%), Positives = 14/44 (31%)

Query: 197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 240
           + + G G +G  +A   K      +   D +          GV 
Sbjct: 8   ICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVA 51

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
           GS V + GLG  G+++A+   A GA  +     +     +    G+  F
Sbjct: 157 GSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVPF 204

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 232
           G  ++I+G G +G S+A  A A G   +IGV+T     +
Sbjct: 137 GQQLLIYGTGQIGQSLAAKASALGM-HVIGVNTTGHPAD 174

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 Length = 364

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 236
           G+ A    A+    + +G  V + GLG V  ++ +     GA +++  D N      A A
Sbjct: 157 GMKAAAKEAFGSDSL-EGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVA 214

Query: 237 FGVTEFLNPND 247
               + + PN 
Sbjct: 215 EEGADAVAPNA 225

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp} Length = 324

 Score = 40.0 bits (94), Expect = 7e-04
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 6/49 (12%)

Query: 194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 242
           G T++I G G++G  +A   K  G  +++GV  +  +       G  + 
Sbjct: 140 GRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSGRERA-----GFDQV 182

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	353
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.9
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.2
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.91
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.71
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.54
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.54
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.51
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.48
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.46
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.23
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.18
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.11
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.07
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.02
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.01
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.99
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.93
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.92
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.86
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.83
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.81
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.81
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.75
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.74
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.68
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.65
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.64
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.63
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.63
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.6
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.58
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.58
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.52
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.47
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.42
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.4
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.4
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.4
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.39
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.39
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.38
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.37
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.31
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.31
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.29
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.26
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.25
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.25
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.24
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	97.23
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.22
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.21
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.2
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.19
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.18
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.18
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.18
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.18
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.17
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.16
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.16
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.16
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.15
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.15
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	97.14
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.13
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.13
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.12
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.12
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.12
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.11
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	97.1
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.1
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.1
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.1
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.1
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.1
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.1
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.1
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.09
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.09
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.07
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.06
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.06
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	97.05
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.05
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.05
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.05
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.04
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.04
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	97.03
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.02
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.01
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.01
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.01
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.01
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	97.01
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.98
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.98
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.96
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.96
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.96
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.94
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.93
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.92
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.92
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.92
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.92
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.91
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.9
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.9
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.9
1spx_A	278	Short-chain reductase family member (5L265); paral	96.9
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	96.89
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.88
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.88
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.88
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.88
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.87
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.86
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.86
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.86
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.86
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.85
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.85
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.85
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.85
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.85
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.84
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.83
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.82
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.82
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.81
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.8
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.8
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.8
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.79
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	96.78
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.78
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.78
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.77
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.77
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.76
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.76
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.75
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.75
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.75
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.74
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.74
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.74
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.74
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.73
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	96.73
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.73
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.73
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.73
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.73
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.73
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.72
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.72
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.72
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.72
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.72
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.72
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.71
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.71
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.71
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.7
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.69
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	96.69
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.68
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.68
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.68
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.67
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.66
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.65
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.65
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.64
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.64
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.64
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.64
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.63
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.63
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.62
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.62
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.62
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.62
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.61
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.61
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.61
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.6
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.6
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.6
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.6
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.59
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.59
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.58
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.58
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.58
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.58
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.58
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.57
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.57
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.56
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.56
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.56
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.55
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.55
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.55
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.55
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.55
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.54
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.54
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.53
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.51
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.51
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.5
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.5
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.49
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.49
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.48
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.48
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.48
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.48
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.48
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.47
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.46
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.44
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.43
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.43
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	96.43
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.42
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.42
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.42
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.41
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	96.41
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.4
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.4
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.39
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.39
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.38
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.37
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.36
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.36
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.35
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.35
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.35
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.35
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.34
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.34
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.33
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.33
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.32
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.32
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.32
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.32
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.32
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.31
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.31
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.3
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.3
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.3
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.29
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.28
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.27
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.25
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.25
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.24
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.24
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.23
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.23
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.2
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.2
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.19
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.19
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.19
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.18
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.18
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.17
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.16
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.14
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.14
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.14
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.12
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.11
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.11
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.11
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.1
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.1
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.09
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.09
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.09
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	96.09
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.08
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.08
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.08
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.07
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.07
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.06
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.06
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	96.05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.05
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.05
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	96.02
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.02
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	96.01
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.01
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.01
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.0
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.0
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.0
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.99
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	95.98
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.98
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.96
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.96
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.96
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	95.95
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.93
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	95.92
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	95.91
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.91
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.88
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.85
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.84
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.83
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.83
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.79
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.79
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.77
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.77
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	95.77
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	95.76
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.76
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.75
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.75
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	95.74
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	95.74
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.73
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.73
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.71
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	95.71
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	95.71
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.69
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.68
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.68
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.67
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.64
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.63
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.61
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.61
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.58
1id1_A	153	Putative potassium channel protein; RCK domain, E.	95.57
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.57
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	95.56
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.56
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.55
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.54
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.53
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	95.52
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.52
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.52
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.5
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.5
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.5
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.46
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.42
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.41
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.41
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	95.41
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	95.4
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.39
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.39
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.39
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.37
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.37
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.36
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	95.35
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.33
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.31
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	95.3
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	95.29
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	95.29
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.28
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.28
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.27
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	95.26
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.25
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.24
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	95.23
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.21
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.2
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.2
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.17
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	95.16
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	95.14
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.14
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	95.14
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.13
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	95.12
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	95.1
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.1
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	95.09
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	95.08
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	95.07
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.07
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.06
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.05
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.05
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	95.02
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.02
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.01
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	95.01
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.01
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	94.98
4had_A	350	Probable oxidoreductase protein; structural genomi	94.96
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	94.92
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	94.91
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	94.9
3f4k_A	257	Putative methyltransferase; structural genomics, P	94.9
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	94.88
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	94.88
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	94.86
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	94.83
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	94.83
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	94.82

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=1.8e-59  Score=448.74  Aligned_cols=344  Identities=50%  Similarity=0.943  Sum_probs=306.1

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCC
Q 018627            7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      +.+|++|||+++++++++++++++|.|+|+++||||||++++||++|++.+.|..   .+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~   82 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT   82 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             cccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCC
Confidence            4567899999999999999999999999999999999999999999999998875   5799999999999999999999


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCccccccc-ccccccCCccccccccCCccccccCccceeeeEEEeCCceEEC
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  162 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i  162 (353)
                      +|++||||++.+...|+.|.+|++|+++.|++.... ..|....+|..++..+|.+.++....|+|+||+++|++.++++
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  162 (378)
T 3uko_A           83 EVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKI  162 (378)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEEC
Confidence            999999999999999999999999999999987532 1333324555555566666666667789999999999999999


Q ss_pred             CCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       163 P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      |+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|++++
T Consensus       163 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v  242 (378)
T 3uko_A          163 DPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF  242 (378)
T ss_dssp             CTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEE
T ss_pred             CCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEE
Confidence            99999999999999999999999888999999999999999999999999999999889999999999999999999999


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecC
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG  322 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  322 (353)
                      +++.+.+.++.+.+++++++++|++|||+|.+..+..+++++++++|+++.+|.......+++.+..+++++++.|++++
T Consensus       243 i~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  322 (378)
T 3uko_A          243 VNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG  322 (378)
T ss_dssp             ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             EccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEec
Confidence            98864356789999998888999999999998889999999999229999999876556667777666779999999887


Q ss_pred             CCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          323 GWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      .+..+++++++++++.+|+++++++|++
T Consensus       323 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~  350 (378)
T 3uko_A          323 GFKSRTQVPWLVEKYMNKEIKVDEYITH  350 (378)
T ss_dssp             GCCHHHHHHHHHHHHHTTSSCCGGGEEE
T ss_pred             CCCchHHHHHHHHHHHcCCCChhHheee
Confidence            7666788999999999999999888865

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=2e-56  Score=426.78  Aligned_cols=339  Identities=44%  Similarity=0.763  Sum_probs=284.8

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCC
Q 018627            7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      .++|++|||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|..  .+|.++|||++|+|+++|+++++
T Consensus         4 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~   83 (373)
T 1p0f_A            4 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILGHEAVGVVESIGAGVTC   83 (373)
T ss_dssp             TTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             cCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCCCCCCcccCcCceEEEEEECCCCCc
Confidence            4567899999999998789999999999999999999999999999999998864  47999999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      |++||||++.+...|+.|.+|+.|+++.|++..... .|.. .+|..++..+|.+.++....|+|+||+++|++.++++|
T Consensus        84 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  162 (373)
T 1p0f_A           84 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  162 (373)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             cCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccc-cCCccccccCCcccccccCCccceeEEEEchhhEEECC
Confidence            999999999999999999999999999999764311 1221 12211111112222222234799999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      ++++++ ||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|+++++
T Consensus       163 ~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  241 (373)
T 1p0f_A          163 PKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL  241 (373)
T ss_dssp             TTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEE
T ss_pred             CCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEE
Confidence            999999 9999999999999988888999999999999999999999999999997899999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCC-ceEEEEcCCCCCCceecchhhhh-cCcEEEeeec
Q 018627          244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW-GLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLF  321 (353)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~  321 (353)
                      ++.+.+.++.+.+++.+++++|+||||+|.+..+..+++++++ + |+++.+|.......+.+.+..++ ++ ++.|++.
T Consensus       242 ~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~  319 (373)
T 1p0f_A          242 NPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SLKGSVF  319 (373)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred             ecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eEEeecc
Confidence            8763225688888888777999999999987889999999999 7 99999998654334455554444 46 9999876


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      +.+. .++++++++++++|++++.++|++
T Consensus       320 ~~~~-~~~~~~~~~l~~~g~i~~~~~i~~  347 (373)
T 1p0f_A          320 GGFK-GEEVSRLVDDYMKKKINVNFLVST  347 (373)
T ss_dssp             GGCC-GGGHHHHHHHHHTTSSCGGGGEEE
T ss_pred             CCcC-HHHHHHHHHHHHcCCCCchheEEE
Confidence            5443 368999999999999998877764

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=7.9e-56  Score=422.87  Aligned_cols=341  Identities=45%  Similarity=0.786  Sum_probs=285.3

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCC
Q 018627            7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +..|++|||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|..  .+|.++|||++|+|+++|+++++
T Consensus         3 ~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~   82 (374)
T 2jhf_A            3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTT   82 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCSSBCCCCSEEEEEEEECTTCCS
T ss_pred             CCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCCCCcccCcCceEEEEEECCCCCC
Confidence            3457899999999998789999999999999999999999999999999988865  37899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      |++||||++.+...|+.|.+|+.|+++.|++..... .|.. .+|..++..+|...++....|+|+||+++|++.++++|
T Consensus        83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  161 (374)
T 2jhf_A           83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (374)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccc-cCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence            999999999999999999999999999998764311 1221 11111111111111222224799999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      +++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++
T Consensus       162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  241 (374)
T 2jhf_A          162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV  241 (374)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEE
T ss_pred             CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEe
Confidence            99999999999999999999988888999999999999999999999999999997899999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCC-ceEEEEcCCCCCCceecchhhhh-cCcEEEeeec
Q 018627          244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW-GLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLF  321 (353)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~  321 (353)
                      ++.+.+.++.+.+++.+++++|++||++|.+..+..+++++++ + |+++.+|.......+++.+..++ ++ ++.|++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~  319 (374)
T 2jhf_A          242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAIF  319 (374)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred             cccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEecc
Confidence            8763225688888888777999999999987889999999999 7 99999998654334455544444 46 9999876


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      +.+...++++++++++++|++++.++|++
T Consensus       320 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~  348 (374)
T 2jhf_A          320 GGFKSKDSVPKLVADFMAKKFALDPLITH  348 (374)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCCGGGEEE
T ss_pred             CCCChHHHHHHHHHHHHcCCCCchhheEE
Confidence            65544568999999999999998887764

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=5.5e-56  Score=424.25  Aligned_cols=339  Identities=43%  Similarity=0.788  Sum_probs=283.9

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCC
Q 018627            7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +..|++|||+++.+++++++++++|.|+|+++||||||++++||++|++.+.|..  .+|.++|||++|+|+++|+++++
T Consensus         3 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~   82 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLGHECAGIVESVGPGVTN   82 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCCCCCCCCcccCccccEEEEEECCCCcc
Confidence            4578899999999998779999999999999999999999999999999988752  57899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCccccc----cc-ccccccCCccccccccCCccccccCccceeeeEEEeCCce
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLG----LE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA  159 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~----~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v  159 (353)
                      |++||||++.+...|+.|.+|++|+++.|++..    .. ..|.. .+|..++..+|.+.++....|+|+||+++|++.+
T Consensus        83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  161 (376)
T 1e3i_A           83 FKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELM-EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (376)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCCCCEEEECCcCCCCCCccccCCCcccCcCcCcccccccccccc-ccCccccccCCcccccccCCccceeEEEeccccE
Confidence            999999999999999999999999999998754    10 01221 1221111111111222222479999999999999


Q ss_pred             EECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627          160 VKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV  239 (353)
Q Consensus       160 ~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~  239 (353)
                      +++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+
T Consensus       162 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa  241 (376)
T 1e3i_A          162 ARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA  241 (376)
T ss_dssp             EECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC
T ss_pred             EECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence            99999999999999999999999998888899999999999999999999999999999789999999999999999999


Q ss_pred             ceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCC-ceEEEEcCCCCCCceecchhhhh-cCcEEE
Q 018627          240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW-GLAVTLGVPKLKPEVAAHYGLFL-SGRTLK  317 (353)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~  317 (353)
                      ++++++.+.+.++.+.+++.+++++|+||||+|.+..+..+++++++ + |+++.+|...  ..+++.+..++ ++ ++.
T Consensus       242 ~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~~--~~~~~~~~~~~~~~-~i~  317 (376)
T 1e3i_A          242 TDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAKV--DEMTIPTVDVILGR-SIN  317 (376)
T ss_dssp             SEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCSS--SEEEEEHHHHHTTC-EEE
T ss_pred             cEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCCC--CccccCHHHhhccC-eEE
Confidence            99998763235688888888777999999999987888999999999 6 9999999843  34445554444 46 999


Q ss_pred             eeecCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          318 GSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       318 g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      |++.+.+...++++++++++++|+|++.++|++
T Consensus       318 g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~  350 (376)
T 1e3i_A          318 GTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTH  350 (376)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEE
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCCcHHhEee
Confidence            987665444578999999999999998887764

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=3.1e-56  Score=425.48  Aligned_cols=340  Identities=45%  Similarity=0.844  Sum_probs=285.2

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCC
Q 018627            8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      ++|++|||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|..   .+|.++|||++|+|+++|+++++
T Consensus         2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~   81 (373)
T 2fzw_A            2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (373)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCC
Confidence            467899999999998789999999999999999999999999999999988864   46899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      |++||||++.+...|+.|.+|+.|+++.|++..... .|.. .+|..++..+|...++....|+|+||+++|++.++++|
T Consensus        82 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (373)
T 2fzw_A           82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (373)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccc-cCCcccccccccccccccCCccceeEEEEchhheEECC
Confidence            999999999999999999999999999998753210 1221 12211111111122222234799999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      +++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|+++++
T Consensus       161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi  240 (373)
T 2fzw_A          161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI  240 (373)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEE
T ss_pred             CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe
Confidence            99999999999999999999988888999999999999999999999999999997899999999999999999999999


Q ss_pred             CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCC-ceEEEEcCCCCCCceecchhhhh-cCcEEEeeec
Q 018627          244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW-GLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLF  321 (353)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~  321 (353)
                      ++.+.+.++.+.+++.+++++|++||++|.+..+..+++++++ + |+++.+|.......+++.+..++ ++ ++.|+++
T Consensus       241 ~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~  318 (373)
T 2fzw_A          241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAF  318 (373)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSG
T ss_pred             ccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEecc
Confidence            8763225688888888777999999999987788999999999 7 99999998654334455554444 46 9999876


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      +.+..+++++++++++++|++++.++|++
T Consensus       319 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~  347 (373)
T 2fzw_A          319 GGWKSVESVPKLVSEYMSKKIKVDEFVTH  347 (373)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCSGGGEEE
T ss_pred             CCCCcHHHHHHHHHHHHcCCCCchheEeE
Confidence            65544578999999999999998887764

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-55  Score=420.70  Aligned_cols=340  Identities=47%  Similarity=0.851  Sum_probs=285.3

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhh-hhccCC--CCCcccccceeEEEEEeCCCCC
Q 018627            7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT-AWETQA--IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~-~~~g~~--~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      ...|++|||+++.+++++++++++|.|+|+++||||||.+++||++|++ .+.|..  .+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~V~   82 (374)
T 1cdo_A            3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVT   82 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCC
T ss_pred             CCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCCCCCCcccCccceEEEEEECCCCc
Confidence            4467899999999998789999999999999999999999999999999 888764  5799999999999999999999


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEEC
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV  162 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~i  162 (353)
                      +|++||||++.+...|+.|.+|+.|+++.|++..... .|.. .+|..++..+|...++....|+|+||+++|++.++++
T Consensus        83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~  161 (374)
T 1cdo_A           83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (374)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccc-cCCccccccCCcccccccCCccceeEEEEchhheEEC
Confidence            9999999999999999999999999999998764311 1221 1221111111212222223479999999999999999


Q ss_pred             CCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          163 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       163 P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      |+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|++++
T Consensus       162 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v  241 (374)
T 1cdo_A          162 DPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF  241 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE
Confidence            99999999999999999999998888899999999999999999999999999999789999999999999999999999


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCC-ceEEEEcCCCCCCceecchhhhh-cCcEEEeee
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGW-GLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSL  320 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~  320 (353)
                      +++.+.+.++.+.+++.+++++|++||++|.+..+..+++++++ + |+++.+|.... ..+.+.+..++ ++ ++.|++
T Consensus       242 i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i~g~~  318 (374)
T 1cdo_A          242 VNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-TWKGSM  318 (374)
T ss_dssp             ECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-EEEECS
T ss_pred             EeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-eEEEEe
Confidence            98763225688888888777999999999987788999999999 7 99999998654 34445554444 46 999987


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          321 FGGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      ++.+...++++++++++++|++++.++|++
T Consensus       319 ~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~  348 (374)
T 1cdo_A          319 FGGFKGKDGVPKMVKAYLDKKVKLDEFITH  348 (374)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCCGGGEEE
T ss_pred             cCCCCcHHHHHHHHHHHHcCCCChHHheee
Confidence            665544568999999999999998887754

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=3e-55  Score=418.19  Aligned_cols=313  Identities=23%  Similarity=0.315  Sum_probs=277.9

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCC
Q 018627            7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      ..+|.+|||+++.+++. ++++++|.|+|++|||||||.+++||++|++.+.|.+  .+|.++|||++|+|+++|+++++
T Consensus        18 ~~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~p~v~G~e~~G~V~~vG~~v~~   96 (370)
T 4ej6_A           18 LYFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPSTPPVTLGHEFCGIVVEAGSAVRD   96 (370)
T ss_dssp             ---CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSEECCCSEEEEEEEECTTCCS
T ss_pred             cccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCCCCCCeecCcceEEEEEEECCCCCC
Confidence            34778999999999976 9999999999999999999999999999999998875  78899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||++.+...|+.|.+|+.|+++.|.+....  |.. .                  .|+|+||+++|++.++++|+
T Consensus        97 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~~P~  155 (370)
T 4ej6_A           97 IAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAI--GIH-R------------------DGGFAEYVLVPRKQAFEIPL  155 (370)
T ss_dssp             SCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEB--TTT-B------------------CCSSBSEEEEEGGGEEEECT
T ss_pred             CCCCCEEEECCCCCCCCChHHhCcCcccCCCcccc--CCC-C------------------CCcceEEEEEchhhEEECCC
Confidence            99999999999999999999999999999987542  222 2                  25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++++++|| +..+++|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|++.+++
T Consensus       156 ~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~  233 (370)
T 4ej6_A          156 TLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVD  233 (370)
T ss_dssp             TSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEEC
T ss_pred             CCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEC
Confidence            99999998 556999999998 7789999999999999999999999999999988999999999999999999999999


Q ss_pred             CCCCCccHHHHHHH---HhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeee
Q 018627          245 PNDNNEPVQQVIKR---ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSL  320 (353)
Q Consensus       245 ~~~~~~~~~~~~~~---~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~  320 (353)
                      +.  +.++.+.+++   ++++++|+||||+|.+..+..++++++++ |+++.+|........+++...+ .+++++.|++
T Consensus       234 ~~--~~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~  310 (370)
T 4ej6_A          234 PS--AGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGSF  310 (370)
T ss_dssp             TT--SSCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEECC
T ss_pred             CC--CcCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEec
Confidence            87  5678888887   66679999999999878899999999997 9999999876533445555444 4699999987


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          321 FGGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      .+.    ++++++++++++|+++++++|+.
T Consensus       311 ~~~----~~~~~~~~l~~~g~i~~~~~i~~  336 (370)
T 4ej6_A          311 INP----FVHRRAADLVATGAIEIDRMISR  336 (370)
T ss_dssp             SCT----TCHHHHHHHHHTTCSCCGGGEEE
T ss_pred             cCh----HHHHHHHHHHHcCCCChhHcEEE
Confidence            543    57999999999999999988864

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-55  Score=419.74  Aligned_cols=336  Identities=31%  Similarity=0.502  Sum_probs=280.2

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      +++|||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|..  .+|.++|||++|+|+++|+++++|++
T Consensus         4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~~~~~   83 (371)
T 1f8f_A            4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQV   83 (371)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCCCCCCcccCcccceEEEEeCCCCCCCCC
Confidence            3579999999998779999999999999999999999999999999998865  57899999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCccccccc-ccccccCCcccccc-ccCCcc-ccccCccceeeeEEEeCCceEECCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFS-IKGKPV-YHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~g~~~~~-~~~~~~-~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      ||||++.+ ..|+.|.+|+.|+++.|++.... ..|.. .+|..++. .+|.+. .+....|+|+||+++|++.++++|+
T Consensus        84 GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP~  161 (371)
T 1f8f_A           84 GDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK  161 (371)
T ss_dssp             TCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred             CCEEEecC-CCCCCChhhhCcCcccccccccccccccc-ccccccccccCCccccccccCCccccCeEEechhheEECCC
Confidence            99999999 99999999999999999876421 11111 11110000 000000 0011236999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++.+++
T Consensus       162 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~  241 (371)
T 1f8f_A          162 DVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVIN  241 (371)
T ss_dssp             TSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEE
T ss_pred             CCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEec
Confidence            99999999999999999999988889999999999999999999999999999977999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCC
Q 018627          245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG  323 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~  323 (353)
                      +.  +.++.+.+++.+++++|+|||++|.+..++.++++++++ |+++.+|.........++...+ .+++++.|++.+.
T Consensus       242 ~~--~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  318 (371)
T 1f8f_A          242 SK--TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGS  318 (371)
T ss_dssp             TT--TSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGG
T ss_pred             CC--ccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCCC
Confidence            86  567888888887779999999999877899999999997 9999999865323334444333 5699999987765


Q ss_pred             CCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          324 WKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      +...++++++++++++|++++.+++++
T Consensus       319 ~~~~~~~~~~~~l~~~g~l~~~~~i~~  345 (371)
T 1f8f_A          319 GSPKKFIPELVRLYQQGKFPFDQLVKF  345 (371)
T ss_dssp             SCHHHHHHHHHHHHHTTSCCGGGGEEE
T ss_pred             CchHHHHHHHHHHHHcCCCCcccceeE
Confidence            444467999999999999998877753

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=8.8e-54  Score=404.39  Aligned_cols=312  Identities=23%  Similarity=0.347  Sum_probs=273.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCC-CCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNP-PQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~-~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.+++. ++++|+|.|+ ++||||||||.++|||++|++.+.+..  .+|+++|||++|+|+++|++++++++||
T Consensus         1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~~~~P~i~G~E~~G~V~~vG~~V~~~~~Gd   79 (346)
T 4a2c_A            1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGD   79 (346)
T ss_dssp             CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCSSSSSBCCCCEEEEEEEEECTTCCSCCTTC
T ss_pred             CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCCCCCCccccEEEEEEEEEECCCcccccCCC
Confidence            89999999987 9999999998 579999999999999999998887765  7899999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChh
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE  169 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~  169 (353)
                      ||++.+...|+.|..|+.|+++.|.+.......   .                  .|+|+||+++|++.++++|++++++
T Consensus        80 rV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~---~------------------~G~~aey~~v~~~~~~~iP~~l~~~  138 (346)
T 4a2c_A           80 AVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR---R------------------DGGFAEYIVVKRKNVFALPTDMPIE  138 (346)
T ss_dssp             EEEECCEECCSCSHHHHTTCGGGCSSCEEBTTT---B------------------CCSSBSEEEEEGGGEEECCTTSCGG
T ss_pred             eEEeeeccCCCCcccccCCccccCCCcccccCC---C------------------CcccccccccchheEEECCCCCCHH
Confidence            999999999999999999999999987653322   2                  2599999999999999999999999


Q ss_pred             hhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627          170 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN  249 (353)
Q Consensus       170 ~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~  249 (353)
                      +||+++ .+++++++ .+..++++|++|||+|+|++|++++|+|+++|++.+++++++++|+++++++|++++++++  +
T Consensus       139 ~aa~l~-~~~~~~~~-~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~--~  214 (346)
T 4a2c_A          139 DGAFIE-PITVGLHA-FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSS--E  214 (346)
T ss_dssp             GGGGHH-HHHHHHHH-HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETT--T
T ss_pred             HHHhch-HHHHHHHH-HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCC--C
Confidence            999886 56666665 4778999999999999999999999999999997889999999999999999999999987  5


Q ss_pred             ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceec-chhh-hhcCcEEEeeecCCC--
Q 018627          250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA-HYGL-FLSGRTLKGSLFGGW--  324 (353)
Q Consensus       250 ~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~-~~~~~~i~g~~~~~~--  324 (353)
                      .++.+.++.++++ ++|++||++|.+..++.++++++++ |+++.+|.......+.. .... +.++++++|++.+..  
T Consensus       215 ~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~  293 (346)
T 4a2c_A          215 MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSP  293 (346)
T ss_dssp             SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSS
T ss_pred             CCHHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCc
Confidence            6777888887776 9999999999988999999999997 99999998776443332 2222 356999999876542  


Q ss_pred             CCCCcHHHHHHHHHcCCCCCCCCccCC
Q 018627          325 KPKTDLPSLVNRYLKKVRNTRKPSCGN  351 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~~~li~~~  351 (353)
                      ...++++++++++++|+++++++|++.
T Consensus       294 ~~~~~~~~~~~l~~~g~l~~~~lI~~~  320 (346)
T 4a2c_A          294 WPGQEWETASRLLTERKLSLEPLIAHR  320 (346)
T ss_dssp             TTCHHHHHHHHHHHTTCSCCGGGEEEE
T ss_pred             chHHHHHHHHHHHHcCCCCCCccEeEE
Confidence            235689999999999999999998753

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=8.3e-54  Score=403.78  Aligned_cols=301  Identities=26%  Similarity=0.396  Sum_probs=268.7

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      +|||+++.+++++++++++|.|+|++|||||||.+++||++|++.+.|..    .+|.++|||++|+|+++|+++++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            69999999998889999999999999999999999999999999998875    47899999999999999999999999


Q ss_pred             CCeE-EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           88 GEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        88 Gd~V-~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      |||| +.++...|+.|.+|+.|+++.|.+....  |.. .                  .|+|+||+++|++.++++|+++
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~iP~~~  140 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT--GYS-V------------------NGGYGEYVVADPNYVGLLPDKV  140 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB--TTT-B------------------CCSSBSEEEECTTTSEECCTTS
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCcccccc--CCC-C------------------CCcceeEEEechHHEEECCCCC
Confidence            9999 5567789999999999999999987643  222 2                  2599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|++.+++++
T Consensus       141 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~  218 (340)
T 3s2e_A          141 GFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNAR  218 (340)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             CHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCC
Confidence            9999999999999999998 66799999999999999999999999999999 999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~  325 (353)
                        +.++.+.+++ +.+++|++||++|....++.++++++++ |+++.+|.....  .++.... +.+++++.|+..+.  
T Consensus       219 --~~~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~--  290 (340)
T 3s2e_A          219 --DTDPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGD--FGTPIFDVVLKGITIRGSIVGT--  290 (340)
T ss_dssp             --TSCHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCSSE--EEEEHHHHHHTTCEEEECCSCC--
T ss_pred             --CcCHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCCCC--CCCCHHHHHhCCeEEEEEecCC--
Confidence              5678888887 4458999999999888999999999997 999999987643  3333333 35699999987654  


Q ss_pred             CCCcHHHHHHHHHcCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~  344 (353)
                       +++++++++++++|++++
T Consensus       291 -~~~~~~~~~l~~~g~l~~  308 (340)
T 3s2e_A          291 -RSDLQESLDFAAHGDVKA  308 (340)
T ss_dssp             -HHHHHHHHHHHHTTSCCC
T ss_pred             -HHHHHHHHHHHHhCCCCc
Confidence             478999999999999986

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1e-53  Score=404.40  Aligned_cols=309  Identities=28%  Similarity=0.345  Sum_probs=260.5

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhcc-C-----CCCCcccccceeEEEEEeCCCCCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET-Q-----AIFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g-~-----~~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      ++|||+++.+++..++++++|.|+|+++||||||.+++||++|++.+.| .     ..+|.++|||++|+|+++|+++++
T Consensus         3 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   82 (348)
T 2d8a_A            3 EKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEG   82 (348)
T ss_dssp             CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCc
Confidence            4799999999985699999999999999999999999999999999888 3     257899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||++.+...|+.|.+|+.|+++.|++....  |.. .                  .|+|+||+++|++.++++|+
T Consensus        83 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~iP~  141 (348)
T 2d8a_A           83 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIF--GVD-T------------------DGVFAEYAVVPAQNIWKNPK  141 (348)
T ss_dssp             CCTTCEEEECCEECCSCCC------------CEET--TTS-S------------------CCSSBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCee--cCC-C------------------CCcCcceEEeChHHeEECCC
Confidence            99999999999999999999999999999876542  222 1                  25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++++++||.+. ++.|||+++ +.+++ +|++|||+|+|++|++++|+|+.+|+++|+++++++++++.++++|++.+++
T Consensus       142 ~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~  218 (348)
T 2d8a_A          142 SIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVIN  218 (348)
T ss_dssp             TSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEEC
T ss_pred             CCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEC
Confidence            99999999886 889999998 77889 9999999999999999999999999878999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecch-hhh-hcCcEEEeeec
Q 018627          245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLF-LSGRTLKGSLF  321 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~-~~~~~i~g~~~  321 (353)
                      +.  +.++.+.+++.+++ ++|++||++|.+..+..++++++++ |+++.+|......  .++. ..+ .+++++.|++.
T Consensus       219 ~~--~~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~--~~~~~~~~~~~~~~i~g~~~  293 (348)
T 2d8a_A          219 PF--EEDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGKV--TIDFNNLIIFKALTIYGITG  293 (348)
T ss_dssp             TT--TSCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSSCC--CCCHHHHTTTTTCEEEECCC
T ss_pred             CC--CcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCCc--ccCchHHHHhCCcEEEEecC
Confidence            86  56788889888877 8999999999878889999999997 9999999865433  3333 333 56999998864


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      ..  ..++++++++++++|+++++++++.
T Consensus       294 ~~--~~~~~~~~~~l~~~g~i~~~~~i~~  320 (348)
T 2d8a_A          294 RH--LWETWYTVSRLLQSGKLNLDPIITH  320 (348)
T ss_dssp             CC--SHHHHHHHHHHHHHTCCCCTTTEEE
T ss_pred             CC--cHHHHHHHHHHHHcCCCChHHhhee
Confidence            42  1467999999999999998888764

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.2e-53  Score=406.14  Aligned_cols=311  Identities=21%  Similarity=0.272  Sum_probs=269.6

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecC--------CCCCCeEEEEEeeeecchhhhhhhccC----C--CCCcccccceeEE
Q 018627            9 QVITCKAAVAWGAGQPLVVEEVEVN--------PPQPEEIRIKVVCTSLCRSDITAWETQ----A--IFPRIFGHEASGI   74 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~l~~~~~~~p--------~~~~~eVlVrv~~~~i~~~D~~~~~g~----~--~~p~~~G~e~~G~   74 (353)
                      ++++|||+++.+++. ++++++|.|        +|+++||||||.+++||++|++.+.+.    .  .+|.++|||++|+
T Consensus         5 ~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~   83 (363)
T 3m6i_A            5 ASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE   83 (363)
T ss_dssp             CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             CcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence            456899999998877 999999999        999999999999999999999988632    1  5689999999999


Q ss_pred             EEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEE
Q 018627           75 VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV  154 (353)
Q Consensus        75 V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~  154 (353)
                      |+++|+++++|++||||++.+...|+.|.+|+.|+++.|.+....  |...                  ..|+|+||+++
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~--g~~~------------------~~G~~aey~~v  143 (363)
T 3m6i_A           84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFL--STPP------------------VPGLLRRYVNH  143 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEET--TSTT------------------SCCSCBSEEEE
T ss_pred             EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCcccc--CCCC------------------CCccceeEEEE
Confidence            999999999999999999999999999999999999999987642  2110                  12599999999


Q ss_pred             eCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627          155 HSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       155 ~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~  234 (353)
                      |++.++++|+ +++++||.+. +++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|+++++++++++++
T Consensus       144 ~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a  220 (363)
T 3m6i_A          144 PAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA  220 (363)
T ss_dssp             EGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH
T ss_pred             ehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence            9999999999 9999999885 889999998 778999999999999999999999999999996699999999999999


Q ss_pred             HhCCCceEeCCC---CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh
Q 018627          235 KAFGVTEFLNPN---DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF  310 (353)
Q Consensus       235 ~~~G~~~~~~~~---~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~  310 (353)
                      +++ ++.++++.   ....++.+.+++.+++ ++|++|||+|++..+..++++++++ |+++.+|.......+++.. .+
T Consensus       221 ~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~  297 (363)
T 3m6i_A          221 KEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKNEIQIPFMR-AS  297 (363)
T ss_dssp             HHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCSCCCCCHHH-HH
T ss_pred             HHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCCCccccHHH-HH
Confidence            999 66655442   1236788889988877 9999999999977899999999997 9999999876544444332 23


Q ss_pred             hcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          311 LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       311 ~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      ++++++.+++..    .++++++++++++|++++++++++
T Consensus       298 ~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~  333 (363)
T 3m6i_A          298 VREVDLQFQYRY----CNTWPRAIRLVENGLVDLTRLVTH  333 (363)
T ss_dssp             HHTCEEEECCSC----SSCHHHHHHHHHTTSSCCGGGEEE
T ss_pred             hcCcEEEEccCC----HHHHHHHHHHHHhCCCChHHceee
Confidence            569999988644    578999999999999999888764

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=7.4e-53  Score=399.72  Aligned_cols=310  Identities=21%  Similarity=0.318  Sum_probs=267.9

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC------CCCCcccccceeEEEEEeCCCCCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------AIFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~------~~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      ++|||+++.+++. ++++++|.|+|+++||||||.+++||++|++.+.+.      ..+|.++|||++|+|+++|+++++
T Consensus         6 ~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~   84 (356)
T 1pl8_A            6 PNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (356)
T ss_dssp             CCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             cCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence            5799999999875 999999999999999999999999999999988742      156899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||++.+...|+.|.+|+.|+++.|++....  |....                  .|+|+||+++|++.++++|+
T Consensus        85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~------------------~G~~aey~~v~~~~~~~iP~  144 (356)
T 1pl8_A           85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC--ATPPD------------------DGNLCRFYKHNAAFCYKLPD  144 (356)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET--TBTTB------------------CCSCBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEEeccCCCCCChHHHCcCcccCCCcccc--CcCCC------------------CCccccEEEeehHHEEECcC
Confidence            99999999999999999999999999999876542  22101                  25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++++++|+.+ .++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++++++++|++.+++
T Consensus       145 ~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~  222 (356)
T 1pl8_A          145 NVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQ  222 (356)
T ss_dssp             TSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEc
Confidence            9999999877 4889999998 7789999999999999999999999999999988999999999999999999999888


Q ss_pred             CCCC-CccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecC
Q 018627          245 PNDN-NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG  322 (353)
Q Consensus       245 ~~~~-~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  322 (353)
                      ++.. ..++.+.+++.+++++|+|||++|.+..+..++++++++ |+++.+|.......  ++... +.+++++.|++..
T Consensus       223 ~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~--~~~~~~~~~~~~i~g~~~~  299 (356)
T 1pl8_A          223 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTT--VPLLHAAIREVDIKGVFRY  299 (356)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSCCC--CCHHHHHHTTCEEEECCSC
T ss_pred             CcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCCCCCc--cCHHHHHhcceEEEEeccc
Confidence            7521 146777777776668999999999877889999999997 99999997543333  33333 3569999987643


Q ss_pred             CCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          323 GWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                          .++++++++++++|+++++++++.
T Consensus       300 ----~~~~~~~~~l~~~g~i~~~~~i~~  323 (356)
T 1pl8_A          300 ----CNTWPVAISMLASKSVNVKPLVTH  323 (356)
T ss_dssp             ----SSCHHHHHHHHHTTSCCCGGGEEE
T ss_pred             ----HHHHHHHHHHHHcCCCChHHheEE
Confidence                468999999999999998887754

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.1e-53  Score=404.79  Aligned_cols=312  Identities=23%  Similarity=0.327  Sum_probs=274.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhh-hhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDIT-AWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~-~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.++++ ++++++|.|+|+++||||||.+++||++|++ .+.|..  .+|.++|||++|+|+++|+++++|++||
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGd   79 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGD   79 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTCCCSSEECCCEEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCCCCCCcccCCcceEEEEEECCCCCcCCCCC
Confidence            89999999998 9999999999999999999999999999999 557765  6789999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCccccccc-ccccccCCccccccccCCccccccCccceeeeEEEeCC--ceEECCCCC
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA  166 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~v~~iP~~l  166 (353)
                      ||++.+...|+.|.+|+.|+.+.|.+.... ..+..                   ..|+|+||+++|++  .++++|+++
T Consensus        80 rV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~-------------------~~G~~aey~~v~~~~~~~~~iP~~~  140 (352)
T 3fpc_A           80 RVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNV-------------------KDGVFGEFFHVNDADMNLAHLPKEI  140 (352)
T ss_dssp             EEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTT-------------------BCCSSBSCEEESSHHHHCEECCTTS
T ss_pred             EEEEccccCCCCchhhcCCCcCCccccccccccccC-------------------CCCcccceEEeccccCeEEECCCCC
Confidence            999999999999999999999998765321 01111                   23699999999976  899999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++|+.++++++|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++|++++++++++++++++|++++++++
T Consensus       141 ~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~  219 (352)
T 3fpc_A          141 PLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK  219 (352)
T ss_dssp             CHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGG
T ss_pred             CHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCC
Confidence            9999999998999999998 778999999999999999999999999999997899999999999999999999999987


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh---hcCcEEEeeecC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF---LSGRTLKGSLFG  322 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~  322 (353)
                        +.++.+.+++.+++ ++|++||++|.+..+..++++++++ |+++.+|.......+++....+   ++++++.++...
T Consensus       220 --~~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~  296 (352)
T 3fpc_A          220 --NGDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCP  296 (352)
T ss_dssp             --GSCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCC
T ss_pred             --CcCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeecc
Confidence              56889999999888 9999999999978899999999997 9999999876555555544332   468888887643


Q ss_pred             CCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          323 GWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      .  .+++++++++++++|++++.+++++
T Consensus       297 ~--~~~~~~~~~~l~~~g~i~~~~~i~~  322 (352)
T 3fpc_A          297 G--GRLRMERLIDLVFYKRVDPSKLVTH  322 (352)
T ss_dssp             C--HHHHHHHHHHHHHTTSCCGGGGEEE
T ss_pred             C--chhHHHHHHHHHHcCCCChhHhhee
Confidence            2  2467999999999999999888764

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=6.9e-53  Score=398.28  Aligned_cols=304  Identities=25%  Similarity=0.352  Sum_probs=267.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-----CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-----~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      |||+++.+++++++++++|.|+|++|||||||++++||++|++.+.|..     .+|.++|||++|+|+++|+++++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            8999999999889999999999999999999999999999999988753     57899999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccc---cccccCCccccccccCCccccccCccceeeeEEEe-CCceEECC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER---RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGCAVKVS  163 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~---~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~-~~~v~~iP  163 (353)
                      ||||++.+...|+.|.+|+.|+++.|.......   .|..                   ..|+|+||+++| ++.++++|
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~-------------------~~G~~aey~~v~~~~~~~~~p  141 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLG-------------------SPGSMAEYMIVDSARHLVPIG  141 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTT-------------------BCCSSBSEEEESCGGGEEECT
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcC-------------------CCceeeEEEEecchhceEeCC
Confidence            999999999999999999999999994332210   1111                   235999999999 99999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHH-hccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWN-VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~-~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      + +++++||.+++++.|||+++.+ ..++++|++|||+|+|++|++++|+|+++|..+|++++++++|++.++++|++.+
T Consensus       142 ~-~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~  220 (345)
T 3jv7_A          142 D-LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAA  220 (345)
T ss_dssp             T-CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEE
T ss_pred             C-CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEE
Confidence            9 9999999999999999999966 4589999999999999999999999999944499999999999999999999999


Q ss_pred             eCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeec
Q 018627          243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF  321 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  321 (353)
                      ++++  + ++.+.+++.+++ ++|++|||+|.+..++.++++++++ |+++.+|..... ...++...+.+++++.++..
T Consensus       221 i~~~--~-~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~  295 (345)
T 3jv7_A          221 VKSG--A-GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGA-HAKVGFFMIPFGASVVTPYW  295 (345)
T ss_dssp             EECS--T-THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTTC-CEEESTTTSCTTCEEECCCS
T ss_pred             EcCC--C-cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-CCCcCHHHHhCCCEEEEEec
Confidence            9885  3 788899998887 9999999999977899999999997 999999987651 23333333456999998875


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCC
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      +.   .++++++++++++|++++
T Consensus       296 ~~---~~~~~~~~~l~~~g~l~~  315 (345)
T 3jv7_A          296 GT---RSELMEVVALARAGRLDI  315 (345)
T ss_dssp             CC---HHHHHHHHHHHHTTCCCC
T ss_pred             CC---HHHHHHHHHHHHcCCCce
Confidence            54   478999999999999986

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.7e-53  Score=402.27  Aligned_cols=302  Identities=22%  Similarity=0.312  Sum_probs=261.9

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCC-CCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCC
Q 018627            9 QVITCKAAVAWGAGQPLVVEEVEVNP-PQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPG   81 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~l~~~~~~~p~-~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~   81 (353)
                      .|++|||+++.+++.+++++++|.|+ |+++||||||.+++||++|++.+.|.+      .+|.++|||++|+|+++|++
T Consensus        12 ~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   91 (359)
T 1h2b_A           12 GVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEG   91 (359)
T ss_dssp             -----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTT
T ss_pred             ChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCC
Confidence            45689999999998779999999999 999999999999999999999988753      47899999999999999999


Q ss_pred             CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627           82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (353)
Q Consensus        82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~  161 (353)
                      +++|++||||++++...|+.|.+|+.|+++.|++...  .|.. .                  .|+|+||+++|++.+++
T Consensus        92 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~-~------------------~G~~aey~~v~~~~~~~  150 (359)
T 1h2b_A           92 VEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF--PGLN-I------------------DGGFAEFMRTSHRSVIK  150 (359)
T ss_dssp             CCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC--BTTT-B------------------CCSSBSEEEECGGGEEE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc--cccC-C------------------CCcccceEEechHhEEE
Confidence            9999999999999889999999999999999987653  2322 1                  25999999999999999


Q ss_pred             CCCCCChhhhh---hhchhhhHHHHHHHHh-ccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHh
Q 018627          162 VSSIAPLEKIC---LLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       162 iP~~l~~~~aa---~l~~~~~ta~~al~~~-~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~  236 (353)
                      +|+++++++||   .+++++.|||+++.+. +++++|++|||+|+|++|++++|+|+++ |+ +|+++++++++++.+++
T Consensus       151 iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~  229 (359)
T 1h2b_A          151 LPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAER  229 (359)
T ss_dssp             CCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHH
T ss_pred             CCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH
Confidence            99999999999   7888899999998665 8999999999999999999999999999 99 89999999999999999


Q ss_pred             CCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChH--HHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhc
Q 018627          237 FGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTG--MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLS  312 (353)
Q Consensus       237 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~  312 (353)
                      +|++++++++  +. +.+.+++++++ ++|++||++|.+.  .+..++++  ++ |+++.+|..... .  ++... +.+
T Consensus       230 lGa~~vi~~~--~~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~~-~--~~~~~~~~~  300 (359)
T 1h2b_A          230 LGADHVVDAR--RD-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGEL-R--FPTIRVISS  300 (359)
T ss_dssp             TTCSEEEETT--SC-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSCC-C--CCHHHHHHT
T ss_pred             hCCCEEEecc--ch-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCCC-C--CCHHHHHhC
Confidence            9999999987  34 78888888877 8999999999865  77787777  76 999999986543 3  33333 357


Q ss_pred             CcEEEeeecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627          313 GRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       313 ~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      ++++.|++...   .++++++++++++|++++
T Consensus       301 ~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~  329 (359)
T 1h2b_A          301 EVSFEGSLVGN---YVELHELVTLALQGKVRV  329 (359)
T ss_dssp             TCEEEECCSCC---HHHHHHHHHHHHTTSCCC
T ss_pred             CcEEEEecCCC---HHHHHHHHHHHHcCCCcc
Confidence            99999886543   468999999999999875

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.2e-52  Score=397.60  Aligned_cols=307  Identities=24%  Similarity=0.344  Sum_probs=265.2

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC-C-----CCCcccccceeEEEEEeCCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-A-----IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~-~-----~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      +|||+++.+++. ++++++|.|+|+++||||||.+++||++|++.+.+. .     .+|.++|||++|+|+++|+++++|
T Consensus         4 ~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~   82 (352)
T 1e3j_A            4 DNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHL   82 (352)
T ss_dssp             CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSC
T ss_pred             cCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCC
Confidence            699999999875 999999999999999999999999999999988732 2     468999999999999999999999


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||||++.+...|+.|.+|+.|+++.|++....  |....                  .|+|+||+++|++.++++|++
T Consensus        83 ~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~~~------------------~G~~aey~~v~~~~~~~iP~~  142 (352)
T 1e3j_A           83 KKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC--ATPPD------------------DGNLARYYVHAADFCHKLPDN  142 (352)
T ss_dssp             CTTCEEEECCEECCSSSHHHHTTCGGGCTTCEET--TBTTB------------------CCSCBSEEEEEGGGEEECCTT
T ss_pred             CCCCEEEEcCcCCCCCChhhhCcCcccCCCCccc--CcCCC------------------CccceeEEEeChHHeEECcCC
Confidence            9999999999999999999999999999876532  22101                  259999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +++++||.+ .++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|++.++++
T Consensus       143 ~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~  219 (352)
T 1e3j_A          143 VSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV  219 (352)
T ss_dssp             SCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcC
Confidence            999999877 4889999998 77899999999999999999999999999999 69999999999999999999999887


Q ss_pred             CCCCccHHHHHHHHhc---C-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeee
Q 018627          246 NDNNEPVQQVIKRITD---G-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL  320 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~---~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  320 (353)
                      .+ ..++.+.+++.++   + ++|++||++|.+..++.++++++++ |+++.+|.......++  ... +.+++++.|++
T Consensus       220 ~~-~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~--~~~~~~~~~~i~g~~  295 (352)
T 1e3j_A          220 DP-AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTVP--LVNACAREIDIKSVF  295 (352)
T ss_dssp             CT-TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCCCCC--HHHHHTTTCEEEECC
T ss_pred             cc-cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCcccc--HHHHHhcCcEEEEec
Confidence            62 1456677777665   4 8999999999877889999999997 9999999754333333  333 35699999876


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          321 FGGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      ..    .++++++++++++|+++++++++.
T Consensus       296 ~~----~~~~~~~~~l~~~g~i~~~~~i~~  321 (352)
T 1e3j_A          296 RY----CNDYPIALEMVASGRCNVKQLVTH  321 (352)
T ss_dssp             SC----SSCHHHHHHHHHTTSCCCGGGEEE
T ss_pred             cc----hHHHHHHHHHHHcCCCChHHheeE
Confidence            43    468999999999999998887754

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=4.8e-53  Score=399.09  Aligned_cols=307  Identities=26%  Similarity=0.395  Sum_probs=269.3

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|..      .+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            7899999998779999999999999999999999999999999988753      5789999999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||||++.+...|+.|.+|+.|++++|++....  |.. .                  .|+|+||+++|++.++++|+++
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~iP~~~  139 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQIL--GVD-R------------------DGGFAEYVVVPAENAWVNPKDL  139 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEB--TTT-B------------------CCSSBSEEEEEGGGEEEECTTS
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCccee--cCC-C------------------CCcceeEEEEchHHeEECCCCC
Confidence            999999999999999999999999999877542  221 1                  2599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++|+.+. ++.|||+++.+.+++ +|++|||+|+|++|++++|+|+.+|+++|+++++++++++.++++ ++.++++.
T Consensus       140 ~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~  216 (343)
T 2dq4_A          140 PFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPL  216 (343)
T ss_dssp             CHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTT
T ss_pred             CHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcC
Confidence            999999885 888999998547889 999999999999999999999999997899999999999999999 99999887


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecch-hh-hhcCcEEEeeecCCC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GL-FLSGRTLKGSLFGGW  324 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~-~~~~~~i~g~~~~~~  324 (353)
                        +.++.+.+++.++.++|++||++|.+..++.++++++++ |+++.+|.....  ..++. .. +.+++++.|++... 
T Consensus       217 --~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~~i~g~~~~~-  290 (343)
T 2dq4_A          217 --EEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDP--IRFDLAGELVMRGITAFGIAGRR-  290 (343)
T ss_dssp             --TSCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--EEECHHHHTGGGTCEEEECCSCC-
T ss_pred             --ccCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ceeCcHHHHHhCceEEEEeecCC-
Confidence              467888888877449999999999877889999999997 999999986543  34443 32 45799999886542 


Q ss_pred             CCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          325 KPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                       ..++++++++++++|++++++++++
T Consensus       291 -~~~~~~~~~~l~~~g~~~~~~~i~~  315 (343)
T 2dq4_A          291 -LWQTWMQGTALVYSGRVDLSPLLTH  315 (343)
T ss_dssp             -TTHHHHHHHHHHHHTSSCCGGGEEE
T ss_pred             -CHHHHHHHHHHHHcCCCChHHheeE
Confidence             2578999999999999988888754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.2e-51  Score=388.92  Aligned_cols=301  Identities=28%  Similarity=0.391  Sum_probs=264.1

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |||+++.+++.+++++++|.|+|+++||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            7899999998679999999999999999999999999999999988754    468999999999999999999999999


Q ss_pred             CeEEeeccc-CCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           89 EHVLTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        89 d~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      |||++.+.. .|+.|.+|+.|+++.|++....  |.. .                  .|+|+||+++|++.++++|++++
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~~P~~~~  139 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNA--GYS-V------------------DGGYAEYCRAAADYVVKIPDNLS  139 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEB--TTT-B------------------CCSSBSEEEEEGGGCEECCTTSC
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCccee--ecC-C------------------CCcceeeEEechHHEEECCCCCC
Confidence            999987654 5999999999999999876532  222 1                  25999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      +++||.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|++.++++. 
T Consensus       140 ~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~-  216 (339)
T 1rjw_A          140 FEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL-  216 (339)
T ss_dssp             HHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT-
T ss_pred             HHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCC-
Confidence            99999999999999999855 489999999999998899999999999999 999999999999999999999998886 


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCC
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKP  326 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~  326 (353)
                       +.++.+.+++.+ +++|++||++|.+..++.++++++++ |+++.+|.....  +.++...+ .+++++.|+..+.   
T Consensus       217 -~~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~---  288 (339)
T 1rjw_A          217 -KEDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE--MPIPIFDTVLNGIKIIGSIVGT---  288 (339)
T ss_dssp             -TSCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSE--EEEEHHHHHHTTCEEEECCSCC---
T ss_pred             -CccHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCC--CccCHHHHHhCCcEEEEeccCC---
Confidence             457777887776 68999999999878899999999997 999999987643  34444333 5699999876543   


Q ss_pred             CCcHHHHHHHHHcCCCCCC
Q 018627          327 KTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       327 ~~~~~~~~~~l~~g~i~~~  345 (353)
                      .++++++++++++|++++.
T Consensus       289 ~~~~~~~~~l~~~g~l~~~  307 (339)
T 1rjw_A          289 RKDLQEALQFAAEGKVKTI  307 (339)
T ss_dssp             HHHHHHHHHHHHTTSCCCC
T ss_pred             HHHHHHHHHHHHcCCCCcc
Confidence            4689999999999999763

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.7e-51  Score=386.74  Aligned_cols=308  Identities=22%  Similarity=0.363  Sum_probs=267.0

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCC
Q 018627            9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +|.+|||+++.+++.+++++++|.|+|+++||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|+++++
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG   81 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence            45689999999998679999999999999999999999999999999988754    46899999999999999999999


Q ss_pred             CCCCCeEEeeccc-CCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           85 FNEGEHVLTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        85 ~~vGd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      |++||||++.+.. .|+.|.+|+.|+++.|++....  |.. .                  .|+|+||+++|++.++++|
T Consensus        82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~-~------------------~G~~aey~~v~~~~~~~iP  140 (347)
T 2hcy_A           82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS--GYT-H------------------DGSFQQYATADAVQAAHIP  140 (347)
T ss_dssp             CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEB--TTT-B------------------CCSSBSEEEEETTTSEEEC
T ss_pred             CcCCCEEEEecCCCCCCCChhhhCCCcccCcccccc--ccC-C------------------CCcceeEEEeccccEEECC
Confidence            9999999987654 5999999999999999876532  222 2                  2599999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      +++++++||.+++++.|||+++.+ .++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.+
T Consensus       141 ~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~  218 (347)
T 2hcy_A          141 QGTDLAQVAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVF  218 (347)
T ss_dssp             TTCCHHHHGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEE
T ss_pred             CCCCHHHHHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceE
Confidence            999999999999999999999854 58999999999998 8999999999999999 99999999999999999999988


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeec
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF  321 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~  321 (353)
                      +++.+ ..++.+.+++.+.+++|++||++|.+..++.+++.++++ |+++.+|.... ..+++....+ .+++++.|++.
T Consensus       219 ~d~~~-~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~  295 (347)
T 2hcy_A          219 IDFTK-EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAG-AKCCSDVFNQVVKSISIVGSYV  295 (347)
T ss_dssp             EETTT-CSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCTT-CEEEEEHHHHHHTTCEEEECCC
T ss_pred             EecCc-cHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCCC-CCCCCCHHHHhhCCcEEEEccC
Confidence            87653 456777888776558999999999877889999999997 99999998754 2344444433 46999998865


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCCC
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      ..   .++++++++++++|++++.
T Consensus       296 ~~---~~~~~~~~~l~~~g~l~~~  316 (347)
T 2hcy_A          296 GN---RADTREALDFFARGLVKSP  316 (347)
T ss_dssp             CC---HHHHHHHHHHHHTTSCCCC
T ss_pred             CC---HHHHHHHHHHHHhCCCccc
Confidence            43   4689999999999999763

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=5.4e-52  Score=392.62  Aligned_cols=305  Identities=23%  Similarity=0.357  Sum_probs=256.9

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      ++|||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|..   .+|.++|||++|+|+++|+++++|++
T Consensus         3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~v   82 (348)
T 3two_A            3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKI   82 (348)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence            589999999998889999999999999999999999999999999998875   67999999999999999999999999


Q ss_pred             CCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           88 GEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        88 Gd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      ||||++.+. ..|+.|.+|+.|+++.|. ....  +.. .+...    +    .+....|+|+||+++|++.++++|+++
T Consensus        83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~--~~~-~~~~~----~----~~~~~~G~~aey~~v~~~~~~~iP~~~  150 (348)
T 3two_A           83 GDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVF--TYD-CLDSF----H----DNEPHMGGYSNNIVVDENYVISVDKNA  150 (348)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCT-TCEE--SSS-SEEGG----G----TTEECCCSSBSEEEEEGGGCEECCTTS
T ss_pred             CCEEEEeCCcCCCCCChhHhCCCcccCc-cccc--ccc-ccccc----c----cCCcCCccccceEEechhhEEECCCCC
Confidence            999988654 689999999999999998 3221  111 00000    0    001113699999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++||.+++++.|||+++. ..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|++.++ .+
T Consensus       151 ~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~~  227 (348)
T 3two_A          151 PLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-TD  227 (348)
T ss_dssp             CHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-SS
T ss_pred             CHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-CC
Confidence            99999999999999999985 4699999999999999999999999999999 999999999999999999999988 32


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC-CCCc-eecchhhhhcCcEEEeeecCCC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPE-VAAHYGLFLSGRTLKGSLFGGW  324 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~-~~~~~~~~~~~~~i~g~~~~~~  324 (353)
                        ...+        ..++|++||++|++..+..++++++++ |+++.+|... .... ++.....+.+++++.|++.+. 
T Consensus       228 --~~~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~-  295 (348)
T 3two_A          228 --PKQC--------KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG-  295 (348)
T ss_dssp             --GGGC--------CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCC-
T ss_pred             --HHHH--------hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCC-
Confidence              2211        127999999999876899999999997 9999999876 3222 332222125699999987665 


Q ss_pred             CCCCcHHHHHHHHHcCCCCC
Q 018627          325 KPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~~  344 (353)
                        .+++.++++++++|++++
T Consensus       296 --~~~~~~~~~l~~~g~l~~  313 (348)
T 3two_A          296 --IKETQEMVDFSIKHNIYP  313 (348)
T ss_dssp             --HHHHHHHHHHHHHTTCCC
T ss_pred             --HHHHHHHHHHHHhCCCCc
Confidence              468999999999999987

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=2.9e-51  Score=387.40  Aligned_cols=303  Identities=24%  Similarity=0.322  Sum_probs=267.6

Q ss_pred             eeEEEEecC-CCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGA-GQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~-~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++... ...++++++|.|+|+||||||||.++|||++|++.++|.+  ++|.++|||++|+|+++|++|++|++||
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~~~p~i~GhE~aG~V~~vG~~V~~~~~Gd   80 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGNKAGTVLGHEGIGIVKEIGADVSSLQVGD   80 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCCCTTCBCCSEEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCCCCCcccceeEEEEEEEECceeeecccCC
Confidence            899998643 4459999999999999999999999999999999998876  7899999999999999999999999999


Q ss_pred             eEEeeccc-CCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627           90 HVLTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL  168 (353)
Q Consensus        90 ~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~  168 (353)
                      ||++.+.. .|+.|.+|..+..+.|..........                     .|+|+||+.++++.++++|+++++
T Consensus        81 rV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------------------~G~~ae~~~~~~~~~~~iP~~~~~  139 (348)
T 4eez_A           81 RVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSV---------------------DGGMAEEAIVVADYAVKVPDGLDP  139 (348)
T ss_dssp             EEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTB---------------------CCSSBSEEEEEGGGSCBCCTTSCH
T ss_pred             eEeecccccccCccccccCCccccccccccccccc---------------------CCcceeeccccccceeecCCCCCH
Confidence            99887765 57999999999999998876533322                     259999999999999999999999


Q ss_pred             hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      ++|+++++++.|+|+++ +..++++|++|||+|+|++|.+++|+|+.++..+|++++++++|+++++++|++.++++.  
T Consensus       140 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~--  216 (348)
T 4eez_A          140 IEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSG--  216 (348)
T ss_dssp             HHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC---
T ss_pred             HHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCC--
Confidence            99999999999999997 667899999999999999999999999987545999999999999999999999999997  


Q ss_pred             CccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627          249 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       249 ~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  327 (353)
                      +.++.+.+++.+++ ++|+++++++++..+..++++++++ |+++.+|.......+++... +++++++.|+..+.   +
T Consensus       217 ~~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~gs~~~~---~  291 (348)
T 4eez_A          217 DVNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPNTEMTLSVPTV-VFDGVEVAGSLVGT---R  291 (348)
T ss_dssp             CCCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCSCEEEECHHHH-HHSCCEEEECCSCC---H
T ss_pred             CCCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccCCCCccCHHHH-HhCCeEEEEEecCC---H
Confidence            67889999999988 9999999999989999999999997 99999998765444443332 46799999987664   5


Q ss_pred             CcHHHHHHHHHcCCCCC
Q 018627          328 TDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       328 ~~~~~~~~~l~~g~i~~  344 (353)
                      ++++++++++++|+|+|
T Consensus       292 ~~~~~~~~l~~~g~i~p  308 (348)
T 4eez_A          292 LDLAEAFQFGAEGKVKP  308 (348)
T ss_dssp             HHHHHHHHHHHTTSCCC
T ss_pred             HHHHHHHHHHHcCCCEE
Confidence            78999999999999875

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=2.3e-51  Score=395.77  Aligned_cols=311  Identities=25%  Similarity=0.322  Sum_probs=265.2

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCC-CCCCeEEEEEeeeecchhhhhhhccC----------CCCCcccccceeEEEEEeC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNP-PQPEEIRIKVVCTSLCRSDITAWETQ----------AIFPRIFGHEASGIVESVG   79 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~-~~~~eVlVrv~~~~i~~~D~~~~~g~----------~~~p~~~G~e~~G~V~~vG   79 (353)
                      .+|++.++..++. ++++++|.|+ |+++||||||.+++||++|++.+.|.          ..+|.++|||++|+|+++|
T Consensus        29 ~~m~a~~~~~~~~-l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG  107 (404)
T 3ip1_A           29 LTWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAG  107 (404)
T ss_dssp             BBSCGGGTEEEEE-EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEEC
T ss_pred             hhcceEEEEeCCc-eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEEC
Confidence            3444444444443 8999999999 99999999999999999999988753          1578999999999999999


Q ss_pred             CCC------CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEE
Q 018627           80 PGV------TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTV  153 (353)
Q Consensus        80 ~~~------~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~  153 (353)
                      +++      ++|++||||++.+...|+.|.+|+.|+++.|.+....  |.. .                  .|+|+||++
T Consensus       108 ~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~--g~~-~------------------~G~~aey~~  166 (404)
T 3ip1_A          108 PEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNEL--GFN-V------------------DGAFAEYVK  166 (404)
T ss_dssp             TTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEB--TTT-B------------------CCSSBSEEE
T ss_pred             CCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCcccccc--CCC-C------------------CCCCcceEE
Confidence            999      8899999999999999999999999999999987642  222 2                  259999999


Q ss_pred             EeCCceEECCCCCC------hhhhhhhchhhhHHHHHHHHh-ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          154 VHSGCAVKVSSIAP------LEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       154 ~~~~~v~~iP~~l~------~~~aa~l~~~~~ta~~al~~~-~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      +|++.++++|++++      +.++|+++.+++|||+++... +++++|++|||+|+|++|++++|+|+.+|+++|+++++
T Consensus       167 v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~  246 (404)
T 3ip1_A          167 VDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEP  246 (404)
T ss_dssp             EEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred             echHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence            99999999999875      456888888999999998655 48999999999999999999999999999989999999


Q ss_pred             ChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCCh-HHHHHHHHHh----ccCCceEEEEcCCCCC
Q 018627          227 NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT-GMITTALQSC----CDGWGLAVTLGVPKLK  300 (353)
Q Consensus       227 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~-~~~~~~~~~l----~~~~G~~v~~g~~~~~  300 (353)
                      +++++++++++|+++++++.  +.++.+.+++.+++ ++|+||||+|.+ ..+..+++++    +++ |+++.+|.....
T Consensus       247 ~~~~~~~~~~lGa~~vi~~~--~~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~~~~~  323 (404)
T 3ip1_A          247 SEVRRNLAKELGADHVIDPT--KENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVARADAK  323 (404)
T ss_dssp             CHHHHHHHHHHTCSEEECTT--TSCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSCCCSC
T ss_pred             CHHHHHHHHHcCCCEEEcCC--CCCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCCCCCC
Confidence            99999999999999999987  57899999999888 999999999986 3667777788    997 999999987764


Q ss_pred             CceecchhhhhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCccC
Q 018627          301 PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       301 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      ..+++... +.+++++.|+....  ..++++++++++++| +++.+++++
T Consensus       324 ~~~~~~~~-~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~~~~i~~  369 (404)
T 3ip1_A          324 IPLTGEVF-QVRRAQIVGSQGHS--GHGTFPRVISLMASG-MDMTKIISK  369 (404)
T ss_dssp             EEECHHHH-HHTTCEEEECCCCC--STTHHHHHHHHHHTT-CCGGGGCCE
T ss_pred             CcccHHHH-hccceEEEEecCCC--chHHHHHHHHHHHcC-CChhheEEE
Confidence            44433322 35699999887433  247899999999999 998888765

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.9e-51  Score=388.25  Aligned_cols=299  Identities=24%  Similarity=0.372  Sum_probs=254.1

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-----CCCcccccceeEEEEEeCCCCCCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-----~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      .+|||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|.+     .+|.++|||++|+|+++|++ ++|
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~   80 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV   80 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence            379999999998779999999999999999999999999999999988754     46899999999999999999 999


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEe-CCceEECCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGCAVKVSS  164 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~-~~~v~~iP~  164 (353)
                      ++||||++.+...|+.|.+|+.|+++.|++...  .|.. .                  .|+|+||+++| ++.++++ +
T Consensus        81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~--~G~~-~------------------~G~~aey~~v~~~~~~~~i-~  138 (344)
T 2h6e_A           81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQII--PGQT-T------------------NGGFSEYMLVKSSRWLVKL-N  138 (344)
T ss_dssp             CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC--BTTT-B------------------CCSSBSEEEESCGGGEEEE-S
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCCCccc--cccc-c------------------CCcceeeEEecCcccEEEe-C
Confidence            999999998888999999999999999987643  2222 1                  25999999999 9999999 9


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHh----ccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHhCC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNV----ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~----~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      ++++++||.+++++.|||+++.+.    .++ +|++|||+|+|++|++++|+|+++  |+ +|+++++++++++.++++|
T Consensus       139 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lG  216 (344)
T 2h6e_A          139 SLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELG  216 (344)
T ss_dssp             SSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHT
T ss_pred             CCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhC
Confidence            999999999999999999998654    288 999999999999999999999999  99 8999999999999999999


Q ss_pred             CceEeCCCCCC-ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcE
Q 018627          239 VTEFLNPNDNN-EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRT  315 (353)
Q Consensus       239 ~~~~~~~~~~~-~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~  315 (353)
                      +++++++.  + .++   +.+++++ ++|+|||++|.+..++.++++++++ |+++.+|......  .++... +.++++
T Consensus       217 a~~vi~~~--~~~~~---~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~--~~~~~~~~~~~~~  288 (344)
T 2h6e_A          217 ADYVSEMK--DAESL---INKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKRV--SLEAFDTAVWNKK  288 (344)
T ss_dssp             CSEEECHH--HHHHH---HHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSCC--CCCHHHHHHTTCE
T ss_pred             CCEEeccc--cchHH---HHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCCCc--ccCHHHHhhCCcE
Confidence            99998764  2 233   3444545 8999999999976899999999997 9999999865433  333333 357999


Q ss_pred             EEeeecCCCCCCCcHHHHHHHHHcCCCCCC
Q 018627          316 LKGSLFGGWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       316 i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      +.|++.+.   .++++++++++++|++++.
T Consensus       289 i~g~~~~~---~~~~~~~~~l~~~g~i~~~  315 (344)
T 2h6e_A          289 LLGSNYGS---LNDLEDVVRLSESGKIKPY  315 (344)
T ss_dssp             EEECCSCC---HHHHHHHHHHHHTTSSCCC
T ss_pred             EEEEecCC---HHHHHHHHHHHHcCCCCcc
Confidence            99886543   4689999999999999764

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=5.3e-52  Score=394.44  Aligned_cols=309  Identities=20%  Similarity=0.246  Sum_probs=259.5

Q ss_pred             ccceeeEEEEecCCCCeEEEE--eecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCC
Q 018627            9 QVITCKAAVAWGAGQPLVVEE--VEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~l~~~~--~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      +|.+|||+++.+++.++++++  +|.|+|+++||||||.+++||++|++.+.|.+   .+|.++|||++|+|+++|++++
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~   82 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCC
Confidence            455899999999987799999  99999999999999999999999999998864   4689999999999999999999


Q ss_pred             -CCCCCCeEEee-cccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627           84 -EFNEGEHVLTV-FIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (353)
Q Consensus        84 -~~~vGd~V~~~-~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~  161 (353)
                       +|++||||++. ....|+.|.+|+.|+++.|++......+.. ..|             ....|+|+||+++|++.+++
T Consensus        83 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~  148 (360)
T 1piw_A           83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY-EDG-------------YVSQGGYANYVRVHEHFVVP  148 (360)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBC-TTS-------------CBCCCSSBSEEEEEGGGEEE
T ss_pred             CCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhcccccc-CCC-------------ccCCCcceeEEEEchhheEE
Confidence             99999999554 457899999999999999987511000000 001             01135999999999999999


Q ss_pred             CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      +|+++++++||.+++++.|||+++.+ +++++|++|||+|+|++|++++|+|+++|+ +|+++++++++++.++++|++.
T Consensus       149 iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  226 (360)
T 1piw_A          149 IPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADH  226 (360)
T ss_dssp             CCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSE
T ss_pred             CCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCE
Confidence            99999999999999999999999855 899999999999999999999999999999 8999999999999999999999


Q ss_pred             EeCCCCCCc-cHHHHHHHHhcCCccEEEeccCC--hHHHHHHHHHhccCCceEEEEcCCCCCC-ceecchhhhhcCcEEE
Q 018627          242 FLNPNDNNE-PVQQVIKRITDGGADYSFECIGD--TGMITTALQSCCDGWGLAVTLGVPKLKP-EVAAHYGLFLSGRTLK  317 (353)
Q Consensus       242 ~~~~~~~~~-~~~~~~~~~~~~~~dvv~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~i~  317 (353)
                      ++++.  +. ++.+.++    +++|++||++|.  +..+..++++++++ |+++.+|.... . .++.... +.+++++.
T Consensus       227 v~~~~--~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~-~~~~~~i~  297 (360)
T 1piw_A          227 YIATL--EEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-HEMLSLKPY-GLKAVSIS  297 (360)
T ss_dssp             EEEGG--GTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-SCCEEECGG-GCBSCEEE
T ss_pred             EEcCc--CchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-ccccCHHHH-HhCCeEEE
Confidence            99876  33 5554443    589999999998  67788899999997 99999998654 3 3443322 35699999


Q ss_pred             eeecCCCCCCCcHHHHHHHHHcCCCCCC
Q 018627          318 GSLFGGWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       318 g~~~~~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      |++.+.   .++++++++++++|++++.
T Consensus       298 g~~~~~---~~~~~~~~~l~~~g~l~~~  322 (360)
T 1piw_A          298 YSALGS---IKELNQLLKLVSEKDIKIW  322 (360)
T ss_dssp             ECCCCC---HHHHHHHHHHHHHTTCCCC
T ss_pred             EEecCC---HHHHHHHHHHHHhCCCcce
Confidence            886543   4689999999999998754

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.5e-51  Score=392.50  Aligned_cols=316  Identities=24%  Similarity=0.305  Sum_probs=266.7

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCC----
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT----   83 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~----   83 (353)
                      .+|||+++.++++.++++++|.|+|+++||||||.+++||++|++.+.|.+   .+|.++|||++|+|+++| +++    
T Consensus        16 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~~   94 (380)
T 1vj0_A           16 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDLN   94 (380)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCTT
T ss_pred             hheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Ccccccc
Confidence            579999999998569999999999999999999999999999999998864   578999999999999999 998    


Q ss_pred             --CCCCCCeEEeecccCCCCCcccc-cCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEE-eCCce
Q 018627           84 --EFNEGEHVLTVFIGECKTCRQCK-SDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV-HSGCA  159 (353)
Q Consensus        84 --~~~vGd~V~~~~~~~c~~c~~c~-~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~-~~~~v  159 (353)
                        +|++||||++.+...|+.|.+|+ .|+++.|++....  |.....+           ......|+|+||+++ |++.+
T Consensus        95 ~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~--g~~~~~~-----------~~~~~~G~~aey~~v~~~~~~  161 (380)
T 1vj0_A           95 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY--GINRGCS-----------EYPHLRGCYSSHIVLDPETDV  161 (380)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET--TTTCCSS-----------STTCCCSSSBSEEEECTTCCE
T ss_pred             CCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCccee--ccccccC-----------CCCCCCccccceEEEcccceE
Confidence              99999999999999999999999 9999999876432  2100000           000113699999999 99999


Q ss_pred             EECCCCCChh-hhhhhchhhhHHHHHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          160 VKVSSIAPLE-KICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       160 ~~iP~~l~~~-~aa~l~~~~~ta~~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      +++|++++++ +|+.+. +++|||+++ +.++ +++|++|||+|+|++|++++|+|+.+|+.+|+++++++++++.++++
T Consensus       162 ~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l  239 (380)
T 1vj0_A          162 LKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI  239 (380)
T ss_dssp             EEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT
T ss_pred             EECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc
Confidence            9999999999 666666 999999998 6678 99999999999999999999999999944999999999999999999


Q ss_pred             CCceEeCCCC-CCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC-CCCceecchhh--hhc
Q 018627          238 GVTEFLNPND-NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGL--FLS  312 (353)
Q Consensus       238 G~~~~~~~~~-~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~--~~~  312 (353)
                      |++.++++.. .+.++.+.+++.+++ ++|+||||+|.+..+..++++++++ |+++.+|... . ...+++...  +.+
T Consensus       240 Ga~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~  317 (380)
T 1vj0_A          240 GADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQ-DPVPFKVYEWLVLK  317 (380)
T ss_dssp             TCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCC-CCEEECHHHHTTTT
T ss_pred             CCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC-CCeeEchHHHHHhC
Confidence            9999988641 124677888888877 8999999999877899999999997 9999999875 3 123444433  456


Q ss_pred             CcEEEeeecCCCCCCCcHHHHHHHHHc--CCCCCCCCcc
Q 018627          313 GRTLKGSLFGGWKPKTDLPSLVNRYLK--KVRNTRKPSC  349 (353)
Q Consensus       313 ~~~i~g~~~~~~~~~~~~~~~~~~l~~--g~i~~~~li~  349 (353)
                      ++++.|++.+.   .++++++++++++  |++  +++++
T Consensus       318 ~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l--~~~i~  351 (380)
T 1vj0_A          318 NATFKGIWVSD---TSHFVKTVSITSRNYQLL--SKLIT  351 (380)
T ss_dssp             TCEEEECCCCC---HHHHHHHHHHHHTCHHHH--GGGCC
T ss_pred             CeEEEEeecCC---HHHHHHHHHHHHhhcCCe--eeEEE
Confidence            99999987553   4689999999999  988  44544

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.5e-51  Score=390.92  Aligned_cols=318  Identities=22%  Similarity=0.341  Sum_probs=255.3

Q ss_pred             CccccCCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEe
Q 018627            2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESV   78 (353)
Q Consensus         2 ~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~v   78 (353)
                      |+|......++|+|++..+++++++++++|.|+|+++||||||.+++||++|++.+.|..   .+|.++|||++|+|+++
T Consensus        12 ~~~~~~~~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~v   91 (369)
T 1uuf_A           12 STSLYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAV   91 (369)
T ss_dssp             -----------CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEE
T ss_pred             hhhhhHhcCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEE
Confidence            344444566789999998887889999999999999999999999999999999988764   47899999999999999


Q ss_pred             CCCCCCCCCCCeEEeeccc-CCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC
Q 018627           79 GPGVTEFNEGEHVLTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG  157 (353)
Q Consensus        79 G~~~~~~~vGd~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~  157 (353)
                      |+++++|++||||++.+.. .|+.|.+|+.|+++.|++......+.....|             ....|+|+||+++|++
T Consensus        92 G~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g-------------~~~~G~~aeyv~v~~~  158 (369)
T 1uuf_A           92 GDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEP-------------GHTLGGYSQQIVVHER  158 (369)
T ss_dssp             CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTT-------------SBCCCSSBSEEEEEGG
T ss_pred             CCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCC-------------CCCCCcccceEEEcch
Confidence            9999999999999987764 6999999999999999876321111000000             0013599999999999


Q ss_pred             ceEECCCC-CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          158 CAVKVSSI-APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       158 ~v~~iP~~-l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      .++++|++ +++++||.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+++
T Consensus       159 ~~~~~P~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~  236 (369)
T 1uuf_A          159 YVLRIRHPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKA  236 (369)
T ss_dssp             GCEECCSCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH
T ss_pred             hEEECCCCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence            99999999 9999999999999999999855 689999999999999999999999999999 79999999999999999


Q ss_pred             CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcE
Q 018627          237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRT  315 (353)
Q Consensus       237 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~  315 (353)
                      +|++.++++.  +.++.+   +.. +++|++||++|.+..++.++++++++ |+++.+|...... ..++... +.++++
T Consensus       237 lGa~~vi~~~--~~~~~~---~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~  308 (369)
T 1uuf_A          237 LGADEVVNSR--NADEMA---AHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPH-KSPEVFNLIMKRRA  308 (369)
T ss_dssp             HTCSEEEETT--CHHHHH---TTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCE
T ss_pred             cCCcEEeccc--cHHHHH---Hhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCCc-cccCHHHHHhCCcE
Confidence            9999999876  333332   222 58999999999866789999999997 9999999865422 1233333 356999


Q ss_pred             EEeeecCCCCCCCcHHHHHHHHHcCCCCCC
Q 018627          316 LKGSLFGGWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       316 i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      +.|++.+.   .++++++++++++|++++.
T Consensus       309 i~g~~~~~---~~~~~~~~~l~~~g~i~~~  335 (369)
T 1uuf_A          309 IAGSMIGG---IPETQEMLDFCAEHGIVAD  335 (369)
T ss_dssp             EEECCSCC---HHHHHHHHHHHHHHTCCCC
T ss_pred             EEEeecCC---HHHHHHHHHHHHhCCCCcc
Confidence            99886543   4679999999999998753

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-50  Score=382.99  Aligned_cols=302  Identities=23%  Similarity=0.382  Sum_probs=264.5

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+++++  ++++++|.|+|+++||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            789999999875  9999999999999999999999999999999988764    4689999999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||||++.+...|+.|.+|+.|+++.|++...  .|.. .                  .|+|+||+++|++.++++|+++
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~--~G~~-~------------------~G~~aey~~v~~~~~~~~P~~~  139 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQI--LGEH-R------------------HGTYAEYVVLPEANLAPKPKNL  139 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE--TTTS-S------------------CCSSBSEEEEEGGGEEECCTTS
T ss_pred             CCCEEEECCCCCcccchhhccCcccccccccc--cCcC-C------------------CccceeEEEeChHHeEECCCCC
Confidence            99999999999999999999999999987653  2322 1                  2599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++++||.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.++++
T Consensus       140 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~  218 (343)
T 2eih_A          140 SFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNY  218 (343)
T ss_dssp             CHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcC
Confidence            999999999999999999966678999999999998 9999999999999999 99999999999999999999998887


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCC
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG  323 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~  323 (353)
                      .  +.++.+.+++.+++ ++|++||++| ...+..++++++++ |+++.+|...... ..++... +.+++++.|+....
T Consensus       219 ~--~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~g~~~~~  293 (343)
T 2eih_A          219 T--HPDWPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIAIAGASSGYE-GTLPFAHVFYRQLSILGSTMAS  293 (343)
T ss_dssp             T--STTHHHHHHHHTTTTCEEEEEESSC-SSSHHHHHHHEEEE-EEEEESSCCCSCC-CCCCTTHHHHTTCEEEECCSCC
T ss_pred             C--cccHHHHHHHHhCCCCceEEEECCC-HHHHHHHHHhhccC-CEEEEEecCCCCc-CccCHHHHHhCCcEEEEecCcc
Confidence            6  45677888887766 8999999999 47789999999997 9999999865431 1233322 35799999876432


Q ss_pred             CCCCCcHHHHHHHHHcCCCCC
Q 018627          324 WKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i~~  344 (353)
                         .++++++++++++|++++
T Consensus       294 ---~~~~~~~~~l~~~g~l~~  311 (343)
T 2eih_A          294 ---KSRLFPILRFVEEGKLKP  311 (343)
T ss_dssp             ---GGGHHHHHHHHHHTSSCC
T ss_pred             ---HHHHHHHHHHHHcCCCCC
Confidence               578999999999999863

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=2.7e-51  Score=394.58  Aligned_cols=313  Identities=23%  Similarity=0.294  Sum_probs=264.3

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCC-CC-----CeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPP-QP-----EEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~-~~-----~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      +|||+++.+++. ++++++|.|+| ++     +||||||.+++||++|++.+.|..  .+|.++|||++|+|+++|++++
T Consensus         2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~~~~p~v~GhE~~G~V~~vG~~v~   80 (398)
T 2dph_A            2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPKGHVLGHEITGEVVEKGSDVE   80 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSCCCTTCBCCCCEEEEEEEECTTCC
T ss_pred             ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCcccCCceEEEEEEECCCCC
Confidence            699999999875 99999999998 68     999999999999999999998864  6789999999999999999999


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCccccccc------ccccccCCccccccccCCccccccCccceeeeEEEeCC
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE------RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG  157 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~------~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~  157 (353)
                      +|++||||++.+...|+.|.+|++|+++.|.+....      ..|.. .               ....|+|+||+++|++
T Consensus        81 ~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~-~---------------~~~~G~~aey~~v~~~  144 (398)
T 2dph_A           81 LMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFD-L---------------KGWSGGQAEYVLVPYA  144 (398)
T ss_dssp             SCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTT-B---------------SSCCCSSBSEEEESSH
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccc-c---------------CCCCceeeeeEEeccc
Confidence            999999999999999999999999999999872110      11110 0               0013699999999987


Q ss_pred             --ceEECCCCCChhh----hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhH
Q 018627          158 --CAVKVSSIAPLEK----ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC  231 (353)
Q Consensus       158 --~v~~iP~~l~~~~----aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~  231 (353)
                        .++++|+++++++    ||+++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++++
T Consensus       145 ~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~  223 (398)
T 2dph_A          145 DYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERL  223 (398)
T ss_dssp             HHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHH
T ss_pred             cCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence              8999999999998    899999999999998 778999999999999999999999999999998899999999999


Q ss_pred             HHHHhCCCceEeCCCCCCccH-HHHHHHHhcC-CccEEEeccCChH--------------HHHHHHHHhccCCceEEEEc
Q 018627          232 EKAKAFGVTEFLNPNDNNEPV-QQVIKRITDG-GADYSFECIGDTG--------------MITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       232 ~~~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~-~~dvv~d~~g~~~--------------~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +.++++|++ ++++.  +.++ .+.+++.+++ ++|+|||++|...              .+..++++++++ |+++.+|
T Consensus       224 ~~a~~lGa~-~i~~~--~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~G  299 (398)
T 2dph_A          224 KLLSDAGFE-TIDLR--NSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIPG  299 (398)
T ss_dssp             HHHHTTTCE-EEETT--SSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECCS
T ss_pred             HHHHHcCCc-EEcCC--CcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEec
Confidence            999999995 78776  3454 7888888877 8999999999742              689999999997 9999999


Q ss_pred             CCCC-----------CCceecchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCC--CCCCcc
Q 018627          296 VPKL-----------KPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN--TRKPSC  349 (353)
Q Consensus       296 ~~~~-----------~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~--~~~li~  349 (353)
                      ....           ...+.++... +.+++++.++...   ..++++++++++++|+++  +.++|+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~~i~  364 (398)
T 2dph_A          300 IYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMPYLSKVMNI  364 (398)
T ss_dssp             CCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCHHHHHHHCE
T ss_pred             cccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCCccchhhEE
Confidence            7621           1223344333 3569999876533   256799999999999998  766654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=3.1e-51  Score=388.71  Aligned_cols=303  Identities=19%  Similarity=0.218  Sum_probs=258.0

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CC---CcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IF---PRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~---p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+++++++++++|.|+|+++||||||.+++||++|++.+.|.+   .+   |.++|||++| |+++|++ ++|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            7899999998889999999999999999999999999999999998864   35   8999999999 9999999 9999


Q ss_pred             CCCeEEeecccC--CCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           87 EGEHVLTVFIGE--CKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        87 vGd~V~~~~~~~--c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      +||||++.+...  |+.|.+|+.|+++.|++......|....                  .|+|+||+++|++.++++|+
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~------------------~G~~aey~~v~~~~~~~iP~  140 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGA------------------HGYMSEFFTSPEKYLVRIPR  140 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEE------------------CCSCBSEEEEEGGGEEECCG
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCC------------------CcceeeEEEEchHHeEECCC
Confidence            999999998888  9999999999999999865421122101                  25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCC------CEEEEEcCChHHHHH-HHHH-HHCCCCeEEEEcCChh---hHHH
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKG------STVVIFGLGTVGLSV-AQGA-KARGASRIIGVDTNPE---KCEK  233 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g------~~vLV~Gag~vG~~a-~~la-~~~g~~~vi~~~~~~~---~~~~  233 (353)
                      +++ ++| +++.+++|||+++ +.+++++|      ++|||+|+|++|+++ +|+| +.+|+++|++++++++   +++.
T Consensus       141 ~~~-~~a-al~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~  217 (357)
T 2b5w_A          141 SQA-ELG-FLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDI  217 (357)
T ss_dssp             GGS-TTG-GGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHH
T ss_pred             Ccc-hhh-hhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHH
Confidence            999 654 5667999999998 67889999      999999999999999 9999 9999955999999999   9999


Q ss_pred             HHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh---
Q 018627          234 AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF---  310 (353)
Q Consensus       234 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---  310 (353)
                      ++++|++++ +++  +.++.+ +++. ++++|+|||++|.+..+..++++++++ |+++.+|.... ....++...+   
T Consensus       218 ~~~lGa~~v-~~~--~~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~  290 (357)
T 2b5w_A          218 IEELDATYV-DSR--QTPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAGAFHRE  290 (357)
T ss_dssp             HHHTTCEEE-ETT--TSCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHHHHHHH
T ss_pred             HHHcCCccc-CCC--ccCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHHHHhHH
Confidence            999999988 876  456666 7776 559999999999877889999999997 99999998762 2233444333   


Q ss_pred             --hcCcEEEeeecCCCCCCCcHHHHHHHHHcC--CCCCCCCcc
Q 018627          311 --LSGRTLKGSLFGGWKPKTDLPSLVNRYLKK--VRNTRKPSC  349 (353)
Q Consensus       311 --~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g--~i~~~~li~  349 (353)
                        .+++++.|++.+.   .++++++++++++|  ++ ++++++
T Consensus       291 ~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~~-~~~~i~  329 (357)
T 2b5w_A          291 MVLHNKALVGSVNSH---VEHFEAATVTFTKLPKWF-LEDLVT  329 (357)
T ss_dssp             HHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHHH-HHHHEE
T ss_pred             HHhCCeEEEEeccCC---HHHHHHHHHHHHhCchhh-hhhhcc
Confidence              5699999886543   47899999999999  85 444443

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=4e-50  Score=381.05  Aligned_cols=310  Identities=21%  Similarity=0.301  Sum_probs=259.4

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCC
Q 018627            9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      ++++|++++.+++.+.++++++|.|+|+++||||||.+++||++|++.+.|..   .+|.++|||++|+|+++|+++++|
T Consensus         6 ~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~   85 (357)
T 2cf5_A            6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKF   85 (357)
T ss_dssp             CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSC
T ss_pred             CcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCC
Confidence            45689999998887779999999999999999999999999999999988754   578999999999999999999999


Q ss_pred             CCCCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           86 NEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        86 ~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      ++||||++.+. ..|+.|.+|+.|+++.|.+....+.+.. ..|             ....|+|+||+++|++.++++|+
T Consensus        86 ~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~P~  151 (357)
T 2cf5_A           86 TVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVY-ING-------------QPTQGGFAKATVVHQKFVVKIPE  151 (357)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBC-TTS-------------CBCCCSSBSCEEEEGGGEEECCS
T ss_pred             CCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccc-cCC-------------CCCCCccccEEEechhhEEECcC
Confidence            99999987554 5899999999999999975543222211 011             11236999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCC-CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceE
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF  242 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~-~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~  242 (353)
                      ++++++||.+++++.|||+++. ..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++++
T Consensus       152 ~ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v  229 (357)
T 2cf5_A          152 GMAVEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDY  229 (357)
T ss_dssp             SCCHHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCE
T ss_pred             CCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCcee
Confidence            9999999999999999999984 46888 99999999999999999999999999 8999999999999888 8999999


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecC
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG  322 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  322 (353)
                      +++.  +.   +.+++.+ +++|++||++|.+..++.++++++++ |+++.+|....... .+....+.+++++.|++.+
T Consensus       230 i~~~--~~---~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~-~~~~~~~~~~~~i~g~~~~  301 (357)
T 2cf5_A          230 VIGS--DQ---AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINNPLQ-FLTPLLMLGRKVITGSFIG  301 (357)
T ss_dssp             EETT--CH---HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSSCCC-CCHHHHHHHTCEEEECCSC
T ss_pred             eccc--cH---HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCCCcc-ccCHHHHhCccEEEEEccC
Confidence            9876  22   3444444 37999999999866788999999997 99999998654322 1233334579999988754


Q ss_pred             CCCCCCcHHHHHHHHHcCCCCCC
Q 018627          323 GWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      .   .++++++++++++|++++.
T Consensus       302 ~---~~~~~~~~~l~~~g~l~~~  321 (357)
T 2cf5_A          302 S---MKETEEMLEFCKEKGLSSI  321 (357)
T ss_dssp             C---HHHHHHHHHHHHHTTCCCC
T ss_pred             C---HHHHHHHHHHHHcCCCCCc
Confidence            3   4689999999999999763

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=2.9e-50  Score=380.62  Aligned_cols=302  Identities=25%  Similarity=0.340  Sum_probs=263.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-----------CCCcccccceeEEEEEeCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----------IFPRIFGHEASGIVESVGPG   81 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-----------~~p~~~G~e~~G~V~~vG~~   81 (353)
                      |||+++.+++.+++++++|.|+|+++||||||.+++||++|++.+.|..           .+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            7899999998779999999999999999999999999999999887642           46899999999999999999


Q ss_pred             CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeC-CceE
Q 018627           82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCAV  160 (353)
Q Consensus        82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~-~~v~  160 (353)
                      +++|++||||++++...|+.|.+|+.|+++.|++....  |.. .                  .|+|+||+++|+ +.++
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~--G~~-~------------------~G~~aey~~v~~~~~~~  139 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL--GIN-F------------------DGAYAEYVIVPHYKYMY  139 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB--TTT-B------------------CCSSBSEEEESCGGGEE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccc--ccc-C------------------CCcceeEEEecCccceE
Confidence            99999999999988899999999999999999876532  222 1                  259999999999 9999


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCC
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      ++ +++++++|+.+++++.|||+++ +.+++++|++|||+|+ |++|++++|+++.. |+ +|+++++++++++.++++|
T Consensus       140 ~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g  216 (347)
T 1jvb_A          140 KL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAG  216 (347)
T ss_dssp             EC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHT
T ss_pred             Ee-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhC
Confidence            99 9999999999999999999998 4588999999999998 59999999999999 99 8999999999999999999


Q ss_pred             CceEeCCCCCCccHHHHHHHHhc-CCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC-CCCceecchhh-hhcCcE
Q 018627          239 VTEFLNPNDNNEPVQQVIKRITD-GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK-LKPEVAAHYGL-FLSGRT  315 (353)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~-~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~-~~~~~~  315 (353)
                      ++.++++.  +.++.+.+.+.+. +++|++||++|.+..++.++++++++ |+++.+|... ..   .++... +.++++
T Consensus       217 ~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~---~~~~~~~~~~~~~  290 (347)
T 1jvb_A          217 ADYVINAS--MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADL---HYHAPLITLSEIQ  290 (347)
T ss_dssp             CSEEEETT--TSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCC---CCCHHHHHHHTCE
T ss_pred             CCEEecCC--CccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCCC---CCCHHHHHhCceE
Confidence            99988876  4567777877776 58999999999876889999999997 9999999876 32   333333 356999


Q ss_pred             EEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          316 LKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       316 i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      +.|+....   .++++++++++++|+++  ++++
T Consensus       291 i~g~~~~~---~~~~~~~~~l~~~g~l~--~~i~  319 (347)
T 1jvb_A          291 FVGSLVGN---QSDFLGIMRLAEAGKVK--PMIT  319 (347)
T ss_dssp             EEECCSCC---HHHHHHHHHHHHTTSSC--CCCE
T ss_pred             EEEEeccC---HHHHHHHHHHHHcCCCC--ceEE
Confidence            99886543   46899999999999986  3453

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=1.3e-49  Score=378.30  Aligned_cols=304  Identities=24%  Similarity=0.247  Sum_probs=261.3

Q ss_pred             ccceeeEEEEecCC-CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCC
Q 018627            9 QVITCKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus         9 ~~~~~~a~~~~~~~-~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      +|.+|||+++.+++ +.++++++|.|+|++|||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|++++
T Consensus        24 m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~  103 (363)
T 3uog_A           24 MSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVT  103 (363)
T ss_dssp             CCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCC
Confidence            56789999999764 359999999999999999999999999999999988764    5789999999999999999999


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCccccccc--ccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE--RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~--~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~  161 (353)
                      +|++||||++.+..      .|+.|. +.|.+....  ..|..                   ..|+|+||+++|++.+++
T Consensus       104 ~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~-------------------~~G~~aey~~v~~~~~~~  157 (363)
T 3uog_A          104 RFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGA-------------------HPGVLSEYVVLPEGWFVA  157 (363)
T ss_dssp             SCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTT-------------------SCCCCBSEEEEEGGGEEE
T ss_pred             CCCCCCEEEEeccc------cccccc-cccccccccccccCcC-------------------CCCcceeEEEechHHeEE
Confidence            99999999987543      678888 888753210  01211                   235999999999999999


Q ss_pred             CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      +|+++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++++|++.
T Consensus       158 iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  236 (363)
T 3uog_A          158 APKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADH  236 (363)
T ss_dssp             CCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSE
T ss_pred             CCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCE
Confidence            999999999999999999999999888999999999999999999999999999999 9999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEee
Q 018627          242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGS  319 (353)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~  319 (353)
                      +++..  ..++.+.+++.+++ ++|++|||+|. ..+..++++++++ |+++.+|.... ....++... +.+++++.|+
T Consensus       237 vi~~~--~~~~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~  311 (363)
T 3uog_A          237 GINRL--EEDWVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGVLEG-FEVSGPVGPLLLKSPVVQGI  311 (363)
T ss_dssp             EEETT--TSCHHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEE-EEEEEECCCSS-CEECCBTTHHHHTCCEEEEC
T ss_pred             EEcCC--cccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcC-CEEEEEecCCC-cccCcCHHHHHhCCcEEEEE
Confidence            99843  57889999998888 99999999995 6789999999997 99999998765 233344333 3569999998


Q ss_pred             ecCCCCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          320 LFGGWKPKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       320 ~~~~~~~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      ..+.   +++++++++++++|+++  ++++
T Consensus       312 ~~~~---~~~~~~~~~l~~~g~l~--~~i~  336 (363)
T 3uog_A          312 SVGH---RRALEDLVGAVDRLGLK--PVID  336 (363)
T ss_dssp             CCCC---HHHHHHHHHHHHHHTCC--CCEE
T ss_pred             ecCC---HHHHHHHHHHHHcCCCc--ccee
Confidence            7654   57899999999999875  4554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=3.1e-49  Score=376.11  Aligned_cols=309  Identities=21%  Similarity=0.326  Sum_probs=256.5

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCC
Q 018627            9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      .+++|+++..+++.+.++++++|.|+|+++||||||.+++||++|++.+.|.+   .+|.++|||++|+|+++|+++++|
T Consensus        13 ~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   92 (366)
T 1yqd_A           13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKV   92 (366)
T ss_dssp             SSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcC
Confidence            35567777776666679999999999999999999999999999999988754   579999999999999999999999


Q ss_pred             CCCCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           86 NEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        86 ~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      ++||||++.+. ..|+.|.+|+.|+++.|........+.. ..|             ....|+|+||+++|++.++++|+
T Consensus        93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~P~  158 (366)
T 1yqd_A           93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIY-HDG-------------TITYGGYSNHMVANERYIIRFPD  158 (366)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBC-TTS-------------CBCCCSSBSEEEEEGGGCEECCT
T ss_pred             CCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccc-cCC-------------CcCCCccccEEEEchhhEEECCC
Confidence            99999987554 5899999999999999965543222211 111             11236999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCC-CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceE
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF  242 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~-~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~  242 (353)
                      ++++++||.+++++.|||+++.+ .+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++.+
T Consensus       159 ~ls~~~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v  236 (366)
T 1yqd_A          159 NMPLDGGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSF  236 (366)
T ss_dssp             TSCTTTTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEE
T ss_pred             CCCHHHhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceE
Confidence            99999999999999999999854 6788 99999999999999999999999999 8999999999998877 8999999


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeec
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF  321 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~  321 (353)
                      +++.  +.   +.+++.+ +++|++||++|.+..++.++++++++ |+++.+|.....  ..+....+ .+++++.|++.
T Consensus       237 ~~~~--~~---~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~i~g~~~  307 (366)
T 1yqd_A          237 LVSR--DQ---EQMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEKP--LELPAFSLIAGRKIVAGSGI  307 (366)
T ss_dssp             EETT--CH---HHHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSSC--EEECHHHHHTTTCEEEECCS
T ss_pred             Eecc--CH---HHHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCCC--CCcCHHHHHhCCcEEEEecC
Confidence            8876  22   3444444 48999999999766678999999997 999999986543  23343333 56999998865


Q ss_pred             CCCCCCCcHHHHHHHHHcCCCCCC
Q 018627          322 GGWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      +.   .+++.++++++++|++++.
T Consensus       308 ~~---~~~~~~~~~l~~~g~l~~~  328 (366)
T 1yqd_A          308 GG---MKETQEMIDFAAKHNITAD  328 (366)
T ss_dssp             CC---HHHHHHHHHHHHHTTCCCC
T ss_pred             CC---HHHHHHHHHHHHcCCCCCc
Confidence            43   4679999999999999864

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.6e-50  Score=384.93  Aligned_cols=314  Identities=23%  Similarity=0.322  Sum_probs=260.5

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCC-CCe------EEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQ-PEE------IRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGV   82 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~-~~e------VlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~   82 (353)
                      +|||+++.+++. ++++++|.|+|+ ++|      |||||.+++||++|++.+.|..  ++|.++|||++|+|+++|+++
T Consensus         2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~p~v~GhE~~G~V~~vG~~v   80 (398)
T 1kol_A            2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDV   80 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCCCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCCCCCCcccCcccEEEEEEECCCC
Confidence            699999998875 999999999997 898      9999999999999999998865  578999999999999999999


Q ss_pred             CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccc----cccccCCccccccccCCccccccCccceeeeEEEeCC-
Q 018627           83 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-  157 (353)
Q Consensus        83 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-  157 (353)
                      ++|++||||++.+...|+.|.+|+.|++++|+......    .|.. ..              ....|+|+||+++|++ 
T Consensus        81 ~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~-~~--------------~~~~G~~aey~~v~~~~  145 (398)
T 1kol_A           81 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV-DM--------------GDWTGGQAEYVLVPYAD  145 (398)
T ss_dssp             CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT-TS--------------CCBCCCSBSEEEESSHH
T ss_pred             CcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeec-cC--------------CCCCceeeeEEEecchh
Confidence            99999999999888899999999999999998764211    1110 00              0012699999999986 


Q ss_pred             -ceEECCCCCChhh----hhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHH
Q 018627          158 -CAVKVSSIAPLEK----ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE  232 (353)
Q Consensus       158 -~v~~iP~~l~~~~----aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~  232 (353)
                       .++++|+++++++    ++.+++++.|||+++. .+++++|++|||+|+|++|++++|+|+++|+++|++++++++|++
T Consensus       146 ~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~  224 (398)
T 1kol_A          146 FNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLA  224 (398)
T ss_dssp             HHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred             CeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHH
Confidence             8999999999988    7889989999999984 689999999999999999999999999999978999999999999


Q ss_pred             HHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCCh---------------HHHHHHHHHhccCCceEEEEcC
Q 018627          233 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT---------------GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       233 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~---------------~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .++++|++ ++++.+ +.++.+.+++.+++ ++|+|||++|.+               ..+..++++++++ |+++.+|.
T Consensus       225 ~a~~lGa~-~i~~~~-~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~  301 (398)
T 1kol_A          225 HAKAQGFE-IADLSL-DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGL  301 (398)
T ss_dssp             HHHHTTCE-EEETTS-SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSC
T ss_pred             HHHHcCCc-EEccCC-cchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEecc
Confidence            99999997 777752 33478888888877 899999999975               2688999999997 99999997


Q ss_pred             CC-CC----------Cceecchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCC-CCCCc
Q 018627          297 PK-LK----------PEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN-TRKPS  348 (353)
Q Consensus       297 ~~-~~----------~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~-~~~li  348 (353)
                      .. ..          ..+.+.... +.+++++.++...   ..++++++++++.+|+++ +.+++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l~~~~~~i  363 (398)
T 1kol_A          302 YVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP---VMKYNRALMQAIMWDRINIAEVVG  363 (398)
T ss_dssp             CCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC---HHHHHHHHHHHHHTTSCCHHHHHT
T ss_pred             ccCCcccccccccccccccccHHHHhhcccEEEecccC---hHHHHHHHHHHHHcCCCCCcccee
Confidence            52 11          112333332 3468888875422   235688999999999998 33444

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=6.7e-48  Score=367.61  Aligned_cols=299  Identities=18%  Similarity=0.143  Sum_probs=247.0

Q ss_pred             cCCccceeeEEEEecCCCCeEEE-EeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCC
Q 018627            6 KQPQVITCKAAVAWGAGQPLVVE-EVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         6 ~~~~~~~~~a~~~~~~~~~l~~~-~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      ++++|.+|||+++.+++. ++++ ++|.|+|++|||||||.+++||++|++.+.+...+|.++|||++|+|+++|+++++
T Consensus         5 tm~~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~p~v~G~e~~G~V~~vG~~v~~   83 (371)
T 3gqv_A            5 PFIPPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQFATPWAFLGTDYAGTVVAVGSDVTH   83 (371)
T ss_dssp             CCCCCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----CCTTSCCCSEEEEEEEEECTTCCS
T ss_pred             CCCCchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcCCCCCccCccccEEEEEEeCCCCCC
Confidence            356788999999999976 9999 99999999999999999999999999988776678999999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||++.       |..|..+.              . .                  .|+|+||+++|++.++++|+
T Consensus        84 ~~~GdrV~~~-------~~~~~~~~--------------~-~------------------~G~~aey~~v~~~~~~~~P~  123 (371)
T 3gqv_A           84 IQVGDRVYGA-------QNEMCPRT--------------P-D------------------QGAFSQYTVTRGRVWAKIPK  123 (371)
T ss_dssp             CCTTCEEEEE-------CCTTCTTC--------------T-T------------------CCSSBSEEECCTTCEEECCT
T ss_pred             CCCCCEEEEe-------ccCCCCCC--------------C-C------------------CCcCcCeEEEchhheEECCC
Confidence            9999999765       33343321              0 1                  25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHh-ccC-----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhH
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNV-ADI-----------SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC  231 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~-~~~-----------~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~  231 (353)
                      ++++++|+.+++++.|||+++.+. .++           ++|++|||+|+ |++|++++|+|+.+|+ +|+++. +++|+
T Consensus       124 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~  201 (371)
T 3gqv_A          124 GLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNF  201 (371)
T ss_dssp             TCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGH
T ss_pred             CCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHH
Confidence            999999999999999999999777 553           89999999998 8999999999999999 888885 78999


Q ss_pred             HHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHh-ccCCceEEEEcCCCC----CCceecc
Q 018627          232 EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC-CDGWGLAVTLGVPKL----KPEVAAH  306 (353)
Q Consensus       232 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~----~~~~~~~  306 (353)
                      ++++++|++++++++  +.++.+.+++++++++|++|||+|++..+..+++++ +++ |+++.+|....    ...+...
T Consensus       202 ~~~~~lGa~~vi~~~--~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~  278 (371)
T 3gqv_A          202 DLAKSRGAEEVFDYR--APNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVTTD  278 (371)
T ss_dssp             HHHHHTTCSEEEETT--STTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEEEE
T ss_pred             HHHHHcCCcEEEECC--CchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCcccccccccccee
Confidence            999999999999987  578899999998888999999999988899999999 586 99999996543    1122211


Q ss_pred             ----hhhhhcCcEEEeeecCCCCCC------CcHHHHHHHHHcCCCCCCCCccC
Q 018627          307 ----YGLFLSGRTLKGSLFGGWKPK------TDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       307 ----~~~~~~~~~i~g~~~~~~~~~------~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                          ...+.+++++.|++.......      +.++++++++++|+|++.+++++
T Consensus       279 ~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  332 (371)
T 3gqv_A          279 WTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVV  332 (371)
T ss_dssp             ECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEE
T ss_pred             eeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeec
Confidence                222346888877754432211      12458889999999999988764

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=4.7e-48  Score=378.25  Aligned_cols=310  Identities=19%  Similarity=0.234  Sum_probs=261.0

Q ss_pred             CCccceeeEEEEecC---------------CCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC-----------
Q 018627            7 QPQVITCKAAVAWGA---------------GQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-----------   60 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~---------------~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~-----------   60 (353)
                      +++|.+|||+++.++               .++++++++|.|+|++|||||||.+++||++|++...+.           
T Consensus        25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~  104 (456)
T 3krt_A           25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY  104 (456)
T ss_dssp             SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHH
T ss_pred             CCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhc
Confidence            457889999999987               245999999999999999999999999999998653211           


Q ss_pred             ---------CCCC-cccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccc
Q 018627           61 ---------AIFP-RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT  130 (353)
Q Consensus        61 ---------~~~p-~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~  130 (353)
                               ..+| .++|||++|+|+++|+++++|++||||++.+ ..|..|..|..+..+.|++....  |....    
T Consensus       105 g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-~~c~~~~~~~~~~~~~c~~~~~~--G~~~~----  177 (456)
T 3krt_A          105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHC-LSVELESSDGHNDTMLDPEQRIW--GFETN----  177 (456)
T ss_dssp             HTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECC-EECCCCSGGGTTSGGGCTTCEET--TTTSS----
T ss_pred             cccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeC-CcccccccccccccccCcccccc--ccCCC----
Confidence                     1456 6999999999999999999999999999864 36888999999999999876542  22211    


Q ss_pred             cccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHh--ccCCCCCEEEEEcC-ChHHH
Q 018627          131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV--ADISKGSTVVIFGL-GTVGL  207 (353)
Q Consensus       131 ~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~--~~~~~g~~vLV~Ga-g~vG~  207 (353)
                                    .|+|+||+++|++.++++|+++++++||.+++++.|||+++...  +++++|++|||+|+ |++|+
T Consensus       178 --------------~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~  243 (456)
T 3krt_A          178 --------------FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGS  243 (456)
T ss_dssp             --------------SCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHH
T ss_pred             --------------CCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHH
Confidence                          25999999999999999999999999999999999999998654  78999999999998 99999


Q ss_pred             HHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC---------------ccHHHHHHHHhcC-CccEEEecc
Q 018627          208 SVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN---------------EPVQQVIKRITDG-GADYSFECI  271 (353)
Q Consensus       208 ~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~---------------~~~~~~~~~~~~~-~~dvv~d~~  271 (353)
                      +++|+|+++|+ +|+++++++++++.++++|++.++++.+.+               ..+.+.+++++++ ++|+||||+
T Consensus       244 ~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~  322 (456)
T 3krt_A          244 YATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHP  322 (456)
T ss_dssp             HHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECS
T ss_pred             HHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcC
Confidence            99999999999 888888999999999999999999886422               1245788888887 999999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      |+ ..+..++++++++ |+++.+|.... ....+.... +++++++.|++.+.+   +++.++++++++|+|++
T Consensus       323 G~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~~  390 (456)
T 3krt_A          323 GR-ETFGASVFVTRKG-GTITTCASTSG-YMHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRIHP  390 (456)
T ss_dssp             CH-HHHHHHHHHEEEE-EEEEESCCTTC-SEEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSCC
T ss_pred             Cc-hhHHHHHHHhhCC-cEEEEEecCCC-cccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCccc
Confidence            98 7899999999997 99999998765 333333333 356889999876653   57888999999999864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=2.5e-47  Score=361.36  Aligned_cols=285  Identities=19%  Similarity=0.242  Sum_probs=248.4

Q ss_pred             CCccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCC
Q 018627            7 QPQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGP   80 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~   80 (353)
                      +++|.+|||+++.+++.+  ++++++|.|+|+++||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|+
T Consensus        23 ~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~  102 (353)
T 4dup_A           23 MSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGP  102 (353)
T ss_dssp             CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECT
T ss_pred             CCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECC
Confidence            357789999999998765  9999999999999999999999999999999998876    3589999999999999999


Q ss_pred             CCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627           81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (353)
Q Consensus        81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~  160 (353)
                      ++++|++||||++..                              .                  .|+|+||+++|++.++
T Consensus       103 ~v~~~~vGdrV~~~~------------------------------~------------------~G~~aey~~v~~~~~~  134 (353)
T 4dup_A          103 GVSGYAVGDKVCGLA------------------------------N------------------GGAYAEYCLLPAGQIL  134 (353)
T ss_dssp             TCCSCCTTCEEEEEC------------------------------S------------------SCCSBSEEEEEGGGEE
T ss_pred             CCCCCCCCCEEEEec------------------------------C------------------CCceeeEEEEcHHHcE
Confidence            999999999998862                              1                  1599999999999999


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV  239 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~  239 (353)
                      ++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|+
T Consensus       135 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa  213 (353)
T 4dup_A          135 PFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGA  213 (353)
T ss_dssp             ECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC
T ss_pred             eCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC
Confidence            999999999999999999999999988899999999999965 9999999999999999 89999999999999999999


Q ss_pred             ceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEe
Q 018627          240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKG  318 (353)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g  318 (353)
                      +.++++.  +.++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|.........++... +.+++++.|
T Consensus       214 ~~~~~~~--~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g  289 (353)
T 4dup_A          214 KRGINYR--SEDFAAVIKAETGQGVDIILDMIGA-AYFERNIASLAKD-GCLSIIAFLGGAVAEKVNLSPIMVKRLTVTG  289 (353)
T ss_dssp             SEEEETT--TSCHHHHHHHHHSSCEEEEEESCCG-GGHHHHHHTEEEE-EEEEECCCTTCSEEEEEECHHHHHTTCEEEE
T ss_pred             CEEEeCC--chHHHHHHHHHhCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEEecCCCcccCCCHHHHHhcCceEEE
Confidence            9999887  5678888888885599999999997 5788999999997 999999987653221133333 357999999


Q ss_pred             eecCCCCCC-------CcHHHHHHHHHcCCCCC
Q 018627          319 SLFGGWKPK-------TDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       319 ~~~~~~~~~-------~~~~~~~~~l~~g~i~~  344 (353)
                      +..+.+...       +.++++++++++|++++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  322 (353)
T 4dup_A          290 STMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAP  322 (353)
T ss_dssp             CCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCC
T ss_pred             EeccccchhhhHHHHHHHHHHHHHHHHCCCccC
Confidence            987665321       11788999999999854

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=6.9e-49  Score=373.77  Aligned_cols=303  Identities=17%  Similarity=0.209  Sum_probs=254.7

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCC-CeEEEEEeeeecchhhhhhhcc--CC---CC---CcccccceeEEEEEeCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQP-EEIRIKVVCTSLCRSDITAWET--QA---IF---PRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~-~eVlVrv~~~~i~~~D~~~~~g--~~---~~---p~~~G~e~~G~V~~vG~~~~   83 (353)
                      |||+++.+++++++++++|.|+|++ +||||||.+++||++|++.+.|  .+   .+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            7899999988779999999999999 9999999999999999999988  43   45   99999999999999  67 8


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      +|++||||++.+...|+.|.+|+.|++++|++......|...                  ..|+|+||+++|++.++++|
T Consensus        78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~------------------~~G~~aey~~v~~~~~~~iP  139 (366)
T 2cdc_A           78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHK------------------MDGFMREWWYDDPKYLVKIP  139 (366)
T ss_dssp             SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBE------------------ECCSCBSEEEECGGGEEEEC
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccC------------------CCCceeEEEEechHHeEECc
Confidence            899999999999999999999999999999876532112110                  12599999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHH--H--hccCC--C-------CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh--
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAW--N--VADIS--K-------GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP--  228 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~--~--~~~~~--~-------g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~--  228 (353)
                      ++++ ++|+ ++.++.|||+++.  +  .++++  +       |++|||+|+|++|++++|+|+.+|+ +|+++++++  
T Consensus       140 ~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~  216 (366)
T 2cdc_A          140 KSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPT  216 (366)
T ss_dssp             GGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCC
T ss_pred             CCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccc
Confidence            9999 8875 5669999999986  4  67888  8       9999999999999999999999999 999999998  


Q ss_pred             -hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHH-HHHHHHhccCCceEEEEcCCCCCCceecc
Q 018627          229 -EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMI-TTALQSCCDGWGLAVTLGVPKLKPEVAAH  306 (353)
Q Consensus       229 -~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~~~~~~~~  306 (353)
                       ++++.++++|++.+ + .  + ++.+.+++ +++++|++||++|.+..+ +.+++.++++ |+++.+|..... ...++
T Consensus       217 ~~~~~~~~~~ga~~v-~-~--~-~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~  288 (366)
T 2cdc_A          217 EVEQTVIEETKTNYY-N-S--S-NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSG-SVPLD  288 (366)
T ss_dssp             HHHHHHHHHHTCEEE-E-C--T-TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCSC-EEEEE
T ss_pred             hHHHHHHHHhCCcee-c-h--H-HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCCC-ccccC
Confidence             89999999999888 6 5  3 55566666 446899999999986677 8999999997 999999987653 23344


Q ss_pred             hhh----hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCC----CCCCccC
Q 018627          307 YGL----FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN----TRKPSCG  350 (353)
Q Consensus       307 ~~~----~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~----~~~li~~  350 (353)
                      ...    +.+++++.|+..+.   .++++++++++++|+++    +++++++
T Consensus       289 ~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~~~~~~~i~~  337 (366)
T 2cdc_A          289 YKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLYPKAAKMLITK  337 (366)
T ss_dssp             HHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHHHHHSHHHHTTSEEE
T ss_pred             hhhhHHHHhcCcEEEEecCCC---HHHHHHHHHHHHcCCCCcccchhhcEEE
Confidence            332    45799999876542   47899999999999987    7777653

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.7e-47  Score=373.41  Aligned_cols=314  Identities=17%  Similarity=0.180  Sum_probs=259.4

Q ss_pred             cCCccceeeEEEEecCC-------------CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhc--------------
Q 018627            6 KQPQVITCKAAVAWGAG-------------QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--------------   58 (353)
Q Consensus         6 ~~~~~~~~~a~~~~~~~-------------~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~--------------   58 (353)
                      ..++|.+|||+++.+++             ++++++++|.|+|++|||||||.+++||++|++...              
T Consensus        18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~   97 (447)
T 4a0s_A           18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA   97 (447)
T ss_dssp             HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred             ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence            34688899999999988             349999999999999999999999999999975321              


Q ss_pred             --cCC----CCC-cccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCcccc
Q 018627           59 --TQA----IFP-RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTR  131 (353)
Q Consensus        59 --g~~----~~p-~~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~  131 (353)
                        +.+    .+| .++|||++|+|+++|+++++|++||||++.+...|+.|. |..+..+.|.+....  |.. .     
T Consensus        98 ~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~~--G~~-~-----  168 (447)
T 4a0s_A           98 RQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRAW--GFE-T-----  168 (447)
T ss_dssp             TTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEET--TTT-S-----
T ss_pred             ccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-ccccccccccccccc--ccc-C-----
Confidence              111    456 699999999999999999999999999999888887776 555778899876542  222 1     


Q ss_pred             ccccCCccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHH--hccCCCCCEEEEEcC-ChHHHH
Q 018627          132 FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGL-GTVGLS  208 (353)
Q Consensus       132 ~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~--~~~~~~g~~vLV~Ga-g~vG~~  208 (353)
                                  ..|+|+||+++|++.++++|+++++++||++++++.|||+++.+  .+++++|++|||+|+ |++|++
T Consensus       169 ------------~~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~  236 (447)
T 4a0s_A          169 ------------NFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSY  236 (447)
T ss_dssp             ------------SSCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHH
T ss_pred             ------------CCCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHH
Confidence                        12599999999999999999999999999999999999999864  388999999999998 999999


Q ss_pred             HHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC----------------ccHHHHHHHHhcCCccEEEeccC
Q 018627          209 VAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN----------------EPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       209 a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~----------------~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      ++|+|+++|+ +|+++++++++++.++++|++.++++.+.+                ..+.+.+++.++.++|++|||+|
T Consensus       237 a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          237 AIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSC
T ss_pred             HHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCC
Confidence            9999999999 888888999999999999999988764211                11366777777449999999999


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      . ..+..++.+++++ |+++.+|.... ....+.... +++++++.|++...   .+++.++++++++|+|++  +++
T Consensus       316 ~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~--~i~  385 (447)
T 4a0s_A          316 R-VTFGLSVIVARRG-GTVVTCGSSSG-YLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFESGAVVP--AMS  385 (447)
T ss_dssp             H-HHHHHHHHHSCTT-CEEEESCCTTC-SEEEEEHHHHHHTTCEEEECCSCC---HHHHHHHHHHHHTTSSCC--CEE
T ss_pred             c-hHHHHHHHHHhcC-CEEEEEecCCC-cccccCHHHHHhCCCEEEecCCCC---HHHHHHHHHHHHcCCccc--cee
Confidence            7 5789999999997 99999998755 233333333 35689999887654   367889999999999864  554

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1e-46  Score=354.47  Aligned_cols=283  Identities=24%  Similarity=0.277  Sum_probs=247.3

Q ss_pred             CccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCC
Q 018627            8 PQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      ++|.+|||+++.+++++  ++++++|.|+|++|||||||.+++||++|++.+.|.+  ++|.++|||++|+|+++|++++
T Consensus         4 ~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~P~i~G~e~~G~V~~vG~~v~   83 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEKPYVLGREASGTVVAKGKGVT   83 (334)
T ss_dssp             -CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSCCCSSEECCSEEEEEEEEECTTCC
T ss_pred             CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCccccceEEEEEEECCCCC
Confidence            46679999999998876  9999999999999999999999999999999988876  5789999999999999999999


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEe-CCceEEC
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGCAVKV  162 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~-~~~v~~i  162 (353)
                      +|++||||++.                               .                  .|+|+||++++ ++.++++
T Consensus        84 ~~~~GdrV~~~-------------------------------~------------------~G~~aey~~v~~~~~~~~~  114 (334)
T 3qwb_A           84 NFEVGDQVAYI-------------------------------S------------------NSTFAQYSKISSQGPVMKL  114 (334)
T ss_dssp             SCCTTCEEEEE-------------------------------C------------------SSCSBSEEEEETTSSEEEC
T ss_pred             CCCCCCEEEEe-------------------------------e------------------CCcceEEEEecCcceEEEC
Confidence            99999999986                               2                  25999999999 9999999


Q ss_pred             CCCCChhh---hhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627          163 SSIAPLEK---ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       163 P~~l~~~~---aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      |+++++++   |+.+++.+.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|
T Consensus       115 P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g  193 (334)
T 3qwb_A          115 PKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYG  193 (334)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTT
T ss_pred             CCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC
Confidence            99999999   88888899999999988889999999999995 9999999999999999 9999999999999999999


Q ss_pred             CceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEE
Q 018627          239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTL  316 (353)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i  316 (353)
                      ++.++++.  +.++.+.+++.+++ ++|++|||+|. ..+..++++++++ |+++.+|...... .++....+ .+++++
T Consensus       194 a~~~~~~~--~~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~~  268 (334)
T 3qwb_A          194 AEYLINAS--KEDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVSFGNASGLI-PPFSITRLSPKNITL  268 (334)
T ss_dssp             CSEEEETT--TSCHHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEE-EEEEECCCTTCCC-CCBCGGGGTTTTCEE
T ss_pred             CcEEEeCC--CchHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEcCCCCCC-CCcchhhhhhCceEE
Confidence            99999887  57788899988877 99999999997 7789999999997 9999999875532 22333333 569999


Q ss_pred             EeeecCCCCC-CC----cHHHHHHHHHcCCCCCC
Q 018627          317 KGSLFGGWKP-KT----DLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       317 ~g~~~~~~~~-~~----~~~~~~~~l~~g~i~~~  345 (353)
                      .++....+.. ++    .++++++++++|++++.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  302 (334)
T 3qwb_A          269 VRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK  302 (334)
T ss_dssp             ECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             EEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc
Confidence            8876554431 22    34689999999999875

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=3.7e-47  Score=358.62  Aligned_cols=285  Identities=21%  Similarity=0.274  Sum_probs=240.8

Q ss_pred             cCCccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeC
Q 018627            6 KQPQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVG   79 (353)
Q Consensus         6 ~~~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG   79 (353)
                      ++++|.+|||+++.+++++  ++++++|.|+|++|||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|
T Consensus        15 ~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG   94 (342)
T 4eye_A           15 QTQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAP   94 (342)
T ss_dssp             ---CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECC
T ss_pred             cccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEEC
Confidence            4567899999999987766  9999999999999999999999999999999998865    578999999999999999


Q ss_pred             CCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCce
Q 018627           80 PGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA  159 (353)
Q Consensus        80 ~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v  159 (353)
                      ++++ |++||||+++..                                                .|+|+||++++++.+
T Consensus        95 ~~v~-~~vGDrV~~~~~------------------------------------------------~G~~aey~~v~~~~~  125 (342)
T 4eye_A           95 EGSG-IKPGDRVMAFNF------------------------------------------------IGGYAERVAVAPSNI  125 (342)
T ss_dssp             TTSS-CCTTCEEEEECS------------------------------------------------SCCSBSEEEECGGGE
T ss_pred             CCCC-CCCCCEEEEecC------------------------------------------------CCcceEEEEEcHHHe
Confidence            9999 999999998621                                                259999999999999


Q ss_pred             EECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627          160 VKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       160 ~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      +++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|
T Consensus       126 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g  204 (342)
T 4eye_A          126 LPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVG  204 (342)
T ss_dssp             EECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHT
T ss_pred             EECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcC
Confidence            9999999999999999999999999988899999999999998 9999999999999999 9999999999999999999


Q ss_pred             CceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-CceecchhhhhcCcEE
Q 018627          239 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTL  316 (353)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i  316 (353)
                      ++.++++.   .++.+.+++.+++ ++|++|||+|. ..+..++++++++ |+++.+|..... ..+++... +.+++++
T Consensus       205 a~~v~~~~---~~~~~~v~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~-~~~~~~i  278 (342)
T 4eye_A          205 ADIVLPLE---EGWAKAVREATGGAGVDMVVDPIGG-PAFDDAVRTLASE-GRLLVVGFAAGGIPTIKVNRL-LLRNASL  278 (342)
T ss_dssp             CSEEEESS---TTHHHHHHHHTTTSCEEEEEESCC---CHHHHHHTEEEE-EEEEEC----------CCCCG-GGTTCEE
T ss_pred             CcEEecCc---hhHHHHHHHHhCCCCceEEEECCch-hHHHHHHHhhcCC-CEEEEEEccCCCCCccCHHHH-hhcCCEE
Confidence            99998875   5788889988887 99999999998 4788999999997 999999976542 23333322 4579999


Q ss_pred             EeeecCCCC------CCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          317 KGSLFGGWK------PKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       317 ~g~~~~~~~------~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      .|+..+.+.      ..++++++++++++| +  +++++
T Consensus       279 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l--~~~i~  314 (342)
T 4eye_A          279 IGVAWGEFLRTHADYLYETQAGLEKLVAEG-M--RPPVS  314 (342)
T ss_dssp             EECCHHHHHHHCTTHHHHHHHHHHHHHHTT-C--CCCEE
T ss_pred             EEEehhhhhhcCHHHHHHHHHHHHHHHHcC-C--CCCcc
Confidence            998765431      114588999999999 4  44554

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1.1e-46  Score=355.20  Aligned_cols=282  Identities=18%  Similarity=0.215  Sum_probs=242.7

Q ss_pred             ceeeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCC
Q 018627           11 ITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus        11 ~~~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      ++|||+++.+++++   ++++++|.|+|++|||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|++++
T Consensus         3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~   82 (340)
T 3gms_A            3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVS   82 (340)
T ss_dssp             CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSC
T ss_pred             cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCC
Confidence            48999999999987   9999999999999999999999999999999998864    6789999999999999999999


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      +|++||||+++.                              .                  .|+|+||+++|++.++++|
T Consensus        83 ~~~vGdrV~~~~------------------------------~------------------~G~~aey~~v~~~~~~~vP  114 (340)
T 3gms_A           83 RELIGKRVLPLR------------------------------G------------------EGTWQEYVKTSADFVVPIP  114 (340)
T ss_dssp             GGGTTCEEEECS------------------------------S------------------SCSSBSEEEEEGGGEEECC
T ss_pred             CCCCCCEEEecC------------------------------C------------------CccceeEEEcCHHHeEECC
Confidence            999999998752                              1                  2599999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      +++++++||++++.+.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.+
T Consensus       115 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~  193 (340)
T 3gms_A          115 DSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYV  193 (340)
T ss_dssp             TTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEE
T ss_pred             CCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEE
Confidence            999999999999999999999988899999999999998 6999999999999999 99999999999999999999999


Q ss_pred             eCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeec
Q 018627          243 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF  321 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  321 (353)
                      +++.  +.++.+.+++.+++ ++|++|||+|.+. ...++++++++ |+++.+|.... ..+++.......++.+..+..
T Consensus       194 ~~~~--~~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~~~  268 (340)
T 3gms_A          194 IDTS--TAPLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSG-IQVNWAEIVTKAKVHANIFHL  268 (340)
T ss_dssp             EETT--TSCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTS-CCCCHHHHHHTSCCEEEECCH
T ss_pred             EeCC--cccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCC-CEEEEEeecCC-CCCCHHHhhhcccceEEEEEe
Confidence            9887  57788899998887 9999999999754 45677999997 99999998654 333332221123555554433


Q ss_pred             CCCC-------CCCcHHHHHHHHHcCCCCCCC
Q 018627          322 GGWK-------PKTDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       322 ~~~~-------~~~~~~~~~~~l~~g~i~~~~  346 (353)
                      ..+.       ..++++++++++++|++++..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  300 (340)
T 3gms_A          269 RHWNDEVSPYKWQETFRHLIRLVENEQLRFMK  300 (340)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             hhhhhhcCHHHHHHHHHHHHHHHHcCCCcccc
Confidence            2211       135788999999999999865

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=1.3e-45  Score=348.16  Aligned_cols=280  Identities=20%  Similarity=0.223  Sum_probs=241.1

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-----CCCcccccceeEEEEEeCCCCCC
Q 018627           10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-----~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      |.+|||+++.+++++++++++|.|+|++|||||||.+++||++|++.+.|..     .+|.++|||++|+|+++|+++++
T Consensus         5 ~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~~   84 (343)
T 3gaz_A            5 TPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDS   84 (343)
T ss_dssp             -CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             chhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCCC
Confidence            4589999999999889999999999999999999999999999999988753     57899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||++....                         ..                  ...|+|+||+++|++.++++|+
T Consensus        85 ~~vGdrV~~~~~g-------------------------~~------------------~~~G~~aey~~v~~~~~~~~P~  121 (343)
T 3gaz_A           85 FRVGDAVFGLTGG-------------------------VG------------------GLQGTHAQFAAVDARLLASKPA  121 (343)
T ss_dssp             CCTTCEEEEECCS-------------------------ST------------------TCCCSSBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEEEeCC-------------------------CC------------------CCCcceeeEEEecHHHeeeCCC
Confidence            9999999875211                         00                  0125999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      ++++++||.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++ .++++++.++++|++. +
T Consensus       122 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i  198 (343)
T 3gaz_A          122 ALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-I  198 (343)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-E
T ss_pred             CCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-e
Confidence            99999999999999999999988899999999999995 9999999999999999 89999 8899999999999998 6


Q ss_pred             CCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecC
Q 018627          244 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG  322 (353)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  322 (353)
                      + .  ..++.+.+++.+++ ++|++|||+|+ ..+..++++++++ |+++.+|....   ++.... +++++++.+++..
T Consensus       199 ~-~--~~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~---~~~~~~-~~~~~~~~g~~~~  269 (343)
T 3gaz_A          199 D-A--SREPEDYAAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRF-GHVVSCLGWGT---HKLAPL-SFKQATYSGVFTL  269 (343)
T ss_dssp             E-T--TSCHHHHHHHHHTTSCEEEEEESSCT-HHHHHHHHHEEEE-EEEEESCCCSC---CCCHHH-HHTTCEEEECCTT
T ss_pred             c-c--CCCHHHHHHHHhcCCCceEEEECCCc-HHHHHHHHHHhcC-CeEEEEcccCc---cccchh-hhcCcEEEEEEec
Confidence            6 3  56788888888877 99999999997 6789999999997 99999987652   232222 4679999887643


Q ss_pred             CC----C----CCCcHHHHHHHHHcCCCCC
Q 018627          323 GW----K----PKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       323 ~~----~----~~~~~~~~~~~l~~g~i~~  344 (353)
                      ..    .    ..++++++++++++|+|++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  299 (343)
T 3gaz_A          270 HTLLANEGLAHFGEMLREADALVQTGKLAP  299 (343)
T ss_dssp             HHHHHTCSHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             cchhcccchHHHHHHHHHHHHHHHCCCccc
Confidence            21    0    1257889999999999864

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=2.3e-45  Score=346.98  Aligned_cols=282  Identities=22%  Similarity=0.221  Sum_probs=240.4

Q ss_pred             ceeeEEEEecCC-----CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-CCCcccccceeEEEEEeCCCCCC
Q 018627           11 ITCKAAVAWGAG-----QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        11 ~~~~a~~~~~~~-----~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      |+|||+++.+++     +.++++++|.|+|++|||||||.+++||++|++.+.|.. .+|.++|||++|+|+++|+++++
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~p~i~G~e~~G~V~~vG~~v~~   80 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKAPRVLGFDAIGVVESVGNEVTM   80 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSCCSSSCBCCCCCEEEEEEEECTTCCS
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCCCCCCCcCcCCccEEEEEEeCCCCCc
Confidence            479999999876     349999999999999999999999999999999888764 78999999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||++.....                           .                  .|+|+||+++|++.++++|+
T Consensus        81 ~~~GdrV~~~~~~~---------------------------~------------------~G~~aey~~v~~~~~~~iP~  115 (346)
T 3fbg_A           81 FNQGDIVYYSGSPD---------------------------Q------------------NGSNAEYQLINERLVAKAPK  115 (346)
T ss_dssp             CCTTCEEEECCCTT---------------------------S------------------CCSSBSEEEEEGGGEEECCS
T ss_pred             CCCCCEEEEcCCCC---------------------------C------------------CcceeEEEEEChHHeEECCC
Confidence            99999998752100                           1                  25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCC------CCCEEEEEc-CChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADIS------KGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~------~g~~vLV~G-ag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      ++++++||.+++++.|||+++.+..+++      +|++|||+| +|++|++++|+|+.+|+ +|+++++++++++.++++
T Consensus       116 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l  194 (346)
T 3fbg_A          116 NISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM  194 (346)
T ss_dssp             SSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH
T ss_pred             CCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc
Confidence            9999999999999999999998888888      999999996 59999999999999999 999999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEE
Q 018627          238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK  317 (353)
Q Consensus       238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~  317 (353)
                      |++.++++.   .++.+.+++..++++|++|||+|.+..+..++++++++ |+++.++...  ..+++... ..+++++.
T Consensus       195 Ga~~vi~~~---~~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~~--~~~~~~~~-~~~~~~~~  267 (346)
T 3fbg_A          195 GADIVLNHK---ESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAFE--NDQDLNAL-KPKSLSFS  267 (346)
T ss_dssp             TCSEEECTT---SCHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCCS--SCBCGGGG-TTTTCEEE
T ss_pred             CCcEEEECC---ccHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCccccc-cccceEEE
Confidence            999999886   36788888874449999999999877789999999997 9999998543  23333322 24688988


Q ss_pred             eeecCCC---CC------CCcHHHHHHHHHcCCCCCC
Q 018627          318 GSLFGGW---KP------KTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       318 g~~~~~~---~~------~~~~~~~~~~l~~g~i~~~  345 (353)
                      +++....   ..      .+.+.++++++++|+|++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  304 (346)
T 3fbg_A          268 HEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPT  304 (346)
T ss_dssp             ECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             EEEEecccccchhhHHHHHHHHHHHHHHHHCCCEECC
Confidence            8654321   10      2457899999999998753

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=2.7e-45  Score=343.55  Aligned_cols=280  Identities=24%  Similarity=0.288  Sum_probs=242.3

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      |||+++.+++++  ++++++|.|+|++|||||||.+++||++|++.+.|.+   .+|.++|||++|+|+++|+++++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999998876  9999999999999999999999999999999998876   56899999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      ||||+....                             .                  .|+|+||+++|++.++++|++++
T Consensus        82 GdrV~~~~~-----------------------------~------------------~G~~aey~~v~~~~~~~~P~~~~  114 (325)
T 3jyn_A           82 GDRVAYGTG-----------------------------P------------------LGAYSEVHVLPEANLVKLADSVS  114 (325)
T ss_dssp             TCEEEESSS-----------------------------S------------------SCCSBSEEEEEGGGEEECCTTSC
T ss_pred             CCEEEEecC-----------------------------C------------------CccccceEEecHHHeEECCCCCC
Confidence            999987521                             1                  25999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      +++||.+++.+.|+|+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++++.
T Consensus       115 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~  193 (325)
T 3jyn_A          115 FEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYS  193 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETT
T ss_pred             HHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC
Confidence            99999999999999999988889999999999995 9999999999999999 999999999999999999999999887


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC-ceecchhhhhc-CcEEEeeecCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP-EVAAHYGLFLS-GRTLKGSLFGG  323 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~i~g~~~~~  323 (353)
                        +.++.+.+++.+++ ++|++|||+|. ..+..++++++++ |+++.+|...... .+++... +.+ ++.+.+...+.
T Consensus       194 --~~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  268 (325)
T 3jyn_A          194 --HEDVAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFGNASGPVSGVNLGIL-AQKDSVYVTRPTLGS  268 (325)
T ss_dssp             --TSCHHHHHHHHTTTCCEEEEEESSCG-GGHHHHHTTEEEE-EEEEECCCTTCCCCSCCTHHH-HHTTSCEEECCCHHH
T ss_pred             --CccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhcCC-CEEEEEecCCCCCCCCCHHHH-hhcCcEEEEeeeeee
Confidence              57788999998887 99999999998 6789999999997 9999999876532 2333222 234 56666544322


Q ss_pred             CC-CCCcH----HHHHHHHHcCCCCCC
Q 018627          324 WK-PKTDL----PSLVNRYLKKVRNTR  345 (353)
Q Consensus       324 ~~-~~~~~----~~~~~~l~~g~i~~~  345 (353)
                      +. .++++    +++++++++|++++.
T Consensus       269 ~~~~~~~~~~~~~~~~~l~~~g~l~~~  295 (325)
T 3jyn_A          269 YANNAQNLQTMADELFDMLASGKLKVD  295 (325)
T ss_dssp             HSCSTTHHHHHHHHHHHHHHTTSSCCC
T ss_pred             ecCCHHHHHHHHHHHHHHHHCCCeeCc
Confidence            21 23444    488999999999886

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=3.5e-45  Score=347.75  Aligned_cols=283  Identities=17%  Similarity=0.183  Sum_probs=240.4

Q ss_pred             ccceeeEEEEecC---CC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCC
Q 018627            9 QVITCKAAVAWGA---GQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGP   80 (353)
Q Consensus         9 ~~~~~~a~~~~~~---~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~   80 (353)
                      .+++|||+++.++   +.  .++++++|.|+|+++||||||.+++||++|++.+.|..   .+|.++|||++|+|+++|+
T Consensus        19 ~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~   98 (363)
T 4dvj_A           19 YFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGP   98 (363)
T ss_dssp             CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECT
T ss_pred             hhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCC
Confidence            5578999999766   22  39999999999999999999999999999999988875   5789999999999999999


Q ss_pred             CCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627           81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (353)
Q Consensus        81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~  160 (353)
                      ++++|++||||++....                          . .                  .|+|+||+++|++.++
T Consensus        99 ~v~~~~vGdrV~~~~~~--------------------------~-~------------------~G~~aey~~v~~~~~~  133 (363)
T 4dvj_A           99 DVTLFRPGDEVFYAGSI--------------------------I-R------------------PGTNAEFHLVDERIVG  133 (363)
T ss_dssp             TCCSCCTTCEEEECCCT--------------------------T-S------------------CCSCBSEEEEEGGGCE
T ss_pred             CCCCCCCCCEEEEccCC--------------------------C-C------------------CccceEEEEeCHHHee
Confidence            99999999999875210                          0 1                  2599999999999999


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCC-----CCCEEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHH
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADIS-----KGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEK  233 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~-----~g~~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~  233 (353)
                      ++|+++++++||.+++++.|||+++.+..+++     +|++|||+|+ |++|++++|+|+++ |+ +|+++++++++++.
T Consensus       134 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~  212 (363)
T 4dvj_A          134 RKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEW  212 (363)
T ss_dssp             ECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHH
T ss_pred             ECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence            99999999999999999999999998888888     8999999985 99999999999984 77 99999999999999


Q ss_pred             HHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcC
Q 018627          234 AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSG  313 (353)
Q Consensus       234 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~  313 (353)
                      ++++|++.++++.   .++.+.+++..++++|+||||+|++..++.++++++++ |+++.+|..   ..+++... ..++
T Consensus       213 ~~~lGad~vi~~~---~~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~---~~~~~~~~-~~k~  284 (363)
T 4dvj_A          213 VKSLGAHHVIDHS---KPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDP---SAFDIMLF-KRKA  284 (363)
T ss_dssp             HHHTTCSEEECTT---SCHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCC---SSCCGGGG-TTTT
T ss_pred             HHHcCCCEEEeCC---CCHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCC---CccchHHH-hhcc
Confidence            9999999999885   36788888875459999999999877889999999997 999999753   23333222 2468


Q ss_pred             cEEEeeecCCC-----CC----CCcHHHHHHHHHcCCCCCC
Q 018627          314 RTLKGSLFGGW-----KP----KTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       314 ~~i~g~~~~~~-----~~----~~~~~~~~~~l~~g~i~~~  345 (353)
                      +++.++.....     ..    .+.+.++++++++|+|++.
T Consensus       285 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  325 (363)
T 4dvj_A          285 VSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRTT  325 (363)
T ss_dssp             CEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCCC
T ss_pred             ceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeecc
Confidence            89888654321     01    2457899999999999863

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=3.3e-45  Score=346.88  Aligned_cols=288  Identities=20%  Similarity=0.261  Sum_probs=240.7

Q ss_pred             CccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCC
Q 018627            8 PQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPG   81 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~   81 (353)
                      ..+.+|||+++.+++.+  ++++++|.|+|+++||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|++
T Consensus        18 ~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~   97 (354)
T 2j8z_A           18 LYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPG   97 (354)
T ss_dssp             ---CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSC
T ss_pred             cchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCC
Confidence            46778999999988864  9999999999999999999999999999999988865    35899999999999999999


Q ss_pred             C-CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627           82 V-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (353)
Q Consensus        82 ~-~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~  160 (353)
                      + ++|++||||+++.                              .                  .|+|+||+++|++.++
T Consensus        98 v~~~~~vGdrV~~~~------------------------------~------------------~G~~aey~~v~~~~~~  129 (354)
T 2j8z_A           98 CQGHWKIGDTAMALL------------------------------P------------------GGGQAQYVTVPEGLLM  129 (354)
T ss_dssp             C--CCCTTCEEEEEC------------------------------S------------------SCCSBSEEEEEGGGEE
T ss_pred             cCCCCCCCCEEEEec------------------------------C------------------CCcceeEEEeCHHHcE
Confidence            9 9999999999862                              1                  1599999999999999


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV  239 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~  239 (353)
                      ++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|+
T Consensus       130 ~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~  208 (354)
T 2j8z_A          130 PIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGA  208 (354)
T ss_dssp             ECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTC
T ss_pred             ECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence            999999999999999999999999978889999999999996 9999999999999999 99999999999999999999


Q ss_pred             ceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecch-hh-hhcCcEE
Q 018627          240 TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GL-FLSGRTL  316 (353)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~-~~~~~~i  316 (353)
                      +.++++.  +.++.+.+.+.+++ ++|++|||+|.+ .+..++++++++ |+++.+|..... ...++. .. +.+++++
T Consensus       209 ~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~i  283 (354)
T 2j8z_A          209 AAGFNYK--KEDFSEATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALD-GRWVLYGLMGGG-DINGPLFSKLLFKRGSL  283 (354)
T ss_dssp             SEEEETT--TSCHHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEE-EEEEECCCTTCS-CCCSCHHHHHHHTTCEE
T ss_pred             cEEEecC--ChHHHHHHHHHhcCCCceEEEECCCch-HHHHHHHhccCC-CEEEEEeccCCC-ccCCChhHHHHhCCCEE
Confidence            9988876  56788888887766 899999999984 788999999997 999999986542 223333 32 3579999


Q ss_pred             EeeecCCCCCC------Cc-HHHHHHHHHcC-CCCCCCCcc
Q 018627          317 KGSLFGGWKPK------TD-LPSLVNRYLKK-VRNTRKPSC  349 (353)
Q Consensus       317 ~g~~~~~~~~~------~~-~~~~~~~l~~g-~i~~~~li~  349 (353)
                      .|+........      .+ ++++++++++| +++++++++
T Consensus       284 ~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~~i~  324 (354)
T 2j8z_A          284 ITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLLPVLD  324 (354)
T ss_dssp             EECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCCCCEE
T ss_pred             EEEEcccccccccHHHHHHHHHHHHHHHHcCCCccccCccc
Confidence            99876543210      01 23578899999 445556665

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1e-45  Score=351.63  Aligned_cols=290  Identities=18%  Similarity=0.228  Sum_probs=242.2

Q ss_pred             cceeeEEEEecCCCC---eEEEEeecCCCC--CCeEEEEEeeeecchhhhhhhccCC----CCC---------cccccce
Q 018627           10 VITCKAAVAWGAGQP---LVVEEVEVNPPQ--PEEIRIKVVCTSLCRSDITAWETQA----IFP---------RIFGHEA   71 (353)
Q Consensus        10 ~~~~~a~~~~~~~~~---l~~~~~~~p~~~--~~eVlVrv~~~~i~~~D~~~~~g~~----~~p---------~~~G~e~   71 (353)
                      +++|||+++.+++++   ++++++|.|+|+  +|||||||.+++||++|++.+.|.+    .+|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            358999999999875   899999999987  9999999999999999999988864    346         8999999


Q ss_pred             eEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeee
Q 018627           72 SGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEY  151 (353)
Q Consensus        72 ~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~  151 (353)
                      +|+|+++|+++++|++||||++.+.                                               ..|+|+||
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~~-----------------------------------------------~~G~~aey  113 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSHV-----------------------------------------------NFGTWRTH  113 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS-----------------------------------------------CCCCSBSE
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecCC-----------------------------------------------CCCcchhe
Confidence            9999999999999999999987621                                               12599999


Q ss_pred             EEEeCCceEECCC-----------CCChhhhhhhchhhhHHHHHHHHhccCCCC-CEEEEEcC-ChHHHHHHHHHHHCCC
Q 018627          152 TVVHSGCAVKVSS-----------IAPLEKICLLSCGLSAGLGAAWNVADISKG-STVVIFGL-GTVGLSVAQGAKARGA  218 (353)
Q Consensus       152 ~~~~~~~v~~iP~-----------~l~~~~aa~l~~~~~ta~~al~~~~~~~~g-~~vLV~Ga-g~vG~~a~~la~~~g~  218 (353)
                      +++|++.++++|+           ++++++||+++++++|||+++.+..++++| ++|||+|+ |++|++++|+|+.+|+
T Consensus       114 ~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga  193 (364)
T 1gu7_A          114 ALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF  193 (364)
T ss_dssp             EEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC
T ss_pred             EecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC
Confidence            9999999999998           899999999999999999999776789999 99999998 9999999999999999


Q ss_pred             CeEEEEcCChhh----HHHHHhCCCceEeCCCCC-CccHHHHHHHHh--cC-CccEEEeccCChHHHHHHHHHhccCCce
Q 018627          219 SRIIGVDTNPEK----CEKAKAFGVTEFLNPNDN-NEPVQQVIKRIT--DG-GADYSFECIGDTGMITTALQSCCDGWGL  290 (353)
Q Consensus       219 ~~vi~~~~~~~~----~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~~--~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~  290 (353)
                       +++++.++.++    .+.++++|+++++++++. ..++.+.+++.+  ++ ++|++|||+|++... .++++++++ |+
T Consensus       194 -~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~-G~  270 (364)
T 1gu7_A          194 -NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNN-GL  270 (364)
T ss_dssp             -EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTT-CE
T ss_pred             -EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccC-CE
Confidence             78777665554    677889999999887510 156778888877  44 899999999986554 889999997 99


Q ss_pred             EEEEcCCCCCCceecchhhh-hcCcEEEeeecCCCCC------CCcHHHHHHHHHcCCCCCCCCccC
Q 018627          291 AVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKP------KTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       291 ~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~------~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      ++.+|.... ....++...+ .+++++.|++...+..      .++++++++++++|++++.++.++
T Consensus       271 ~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  336 (364)
T 1gu7_A          271 MLTYGGMSF-QPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIET  336 (364)
T ss_dssp             EEECCCCSS-CCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEE
T ss_pred             EEEecCCCC-CCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEE
Confidence            999997653 2333443333 4799999887543211      256899999999999998877654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=2.5e-45  Score=343.24  Aligned_cols=274  Identities=19%  Similarity=0.168  Sum_probs=231.5

Q ss_pred             cceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC--------CCCCcccccceeEEEEEeC
Q 018627           10 VITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------AIFPRIFGHEASGIVESVG   79 (353)
Q Consensus        10 ~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~--------~~~p~~~G~e~~G~V~~vG   79 (353)
                      +++|||+++.+++++  ++++++|.|+|++|||||||.+++||++|++.+.|.        ..+|.++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            357999999998877  999999999999999999999999999999998882        2689999999999999999


Q ss_pred             CCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCce
Q 018627           80 PGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCA  159 (353)
Q Consensus        80 ~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v  159 (353)
                      +++++|++||||++.+...+                          .                  .|+|+||+++|++.+
T Consensus        84 ~~v~~~~~GdrV~~~~~~~~--------------------------~------------------~G~~aey~~v~~~~~  119 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGFPD--------------------------H------------------PCCYAEYVCASPDTI  119 (321)
T ss_dssp             TTCCSCCTTCEEEEECSTTT--------------------------C------------------CCCSBSEEEECGGGE
T ss_pred             CCCCCCCCCCEEEEccCCCC--------------------------C------------------CCcceEEEEecHHHh
Confidence            99999999999998742111                          1                  259999999999999


Q ss_pred             EECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEc-CChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627          160 VKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       160 ~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~G-ag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      +++|+++++++||.+++++.|||+++ +.+++++|++|||+| +|++|++++|+|+.+|+ +|+++. ++++++.++++|
T Consensus       120 ~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lG  196 (321)
T 3tqh_A          120 IQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALG  196 (321)
T ss_dssp             EECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHT
T ss_pred             ccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcC
Confidence            99999999999999999999999999 889999999999998 59999999999999999 899886 566689999999


Q ss_pred             CceEeCCCCCCcc-HHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEE
Q 018627          239 VTEFLNPNDNNEP-VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK  317 (353)
Q Consensus       239 ~~~~~~~~~~~~~-~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~  317 (353)
                      ++++++++  +.+ +.+.+     .++|++|||+|++. ...++++++++ |+++.+|......   .......+++++.
T Consensus       197 a~~~i~~~--~~~~~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~---~~~~~~~~~~~~~  264 (321)
T 3tqh_A          197 AEQCINYH--EEDFLLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTITAGR---VIEVAKQKHRRAF  264 (321)
T ss_dssp             CSEEEETT--TSCHHHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCSTTHHH---HHHHHHHTTCEEE
T ss_pred             CCEEEeCC--Ccchhhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCCCchh---hhhhhhhcceEEE
Confidence            99999887  344 44333     47999999999855 48999999997 9999998654311   1112235688888


Q ss_pred             eeecCCCCCCCcHHHHHHHHHcCCCCC
Q 018627          318 GSLFGGWKPKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       318 g~~~~~~~~~~~~~~~~~~l~~g~i~~  344 (353)
                      ++...  ...++++++++++++|+|++
T Consensus       265 ~~~~~--~~~~~~~~~~~l~~~g~l~~  289 (321)
T 3tqh_A          265 GLLKQ--FNIEELHYLGKLVSEDKLRI  289 (321)
T ss_dssp             CCCCC--CCHHHHHHHHHHHHTTSSCC
T ss_pred             EEecC--CCHHHHHHHHHHHHCCCccc
Confidence            75432  23578999999999999986

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.5e-45  Score=348.64  Aligned_cols=279  Identities=20%  Similarity=0.270  Sum_probs=230.8

Q ss_pred             ceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCC
Q 018627           11 ITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        11 ~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      ++|||+++.+++++  ++++++|.|+|++|||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|+++++
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~   81 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG   81 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence            57999999999864  9999999999999999999999999999999998874    57899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||+++..                                                .|+|+||+++|++.++++|+
T Consensus        82 ~~~GdrV~~~~~------------------------------------------------~G~~aey~~v~~~~~~~iP~  113 (349)
T 4a27_A           82 YEIGDRVMAFVN------------------------------------------------YNAWAEVVCTPVEFVYKIPD  113 (349)
T ss_dssp             CCTTCEEEEECS------------------------------------------------SCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCCEEEEecC------------------------------------------------CCcceEEEEecHHHeEECCC
Confidence            999999998731                                                25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~  243 (353)
                      ++++++||.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|..+|+++. ++++.+.++ +|+++++
T Consensus       114 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~  191 (349)
T 4a27_A          114 DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLF  191 (349)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEE
Confidence            99999999999999999999988899999999999998 99999999999999654888886 667888888 9999998


Q ss_pred             CCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC---------------ceecchh
Q 018627          244 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP---------------EVAAHYG  308 (353)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---------------~~~~~~~  308 (353)
                      + .  +.++.+.+++.+++++|++|||+|++. +..++++++++ |+++.+|......               ...+.+.
T Consensus       192 ~-~--~~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (349)
T 4a27_A          192 D-R--NADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPI  266 (349)
T ss_dssp             E-T--TSCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC-------------------------CHH
T ss_pred             c-C--CccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCHH
Confidence            8 4  578888998887779999999999854 58899999997 9999999753211               0123333


Q ss_pred             hh-hcCcEEEeeecCCCC--------CCCcHHHHHHHHHcCCCCC
Q 018627          309 LF-LSGRTLKGSLFGGWK--------PKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       309 ~~-~~~~~i~g~~~~~~~--------~~~~~~~~~~~l~~g~i~~  344 (353)
                      .+ .+++++.|+....+.        .+++++++++++++|++++
T Consensus       267 ~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  311 (349)
T 4a27_A          267 KLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIKP  311 (349)
T ss_dssp             HHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             HHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCccc
Confidence            33 458899888754321        1467899999999999854

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=3e-46  Score=353.41  Aligned_cols=288  Identities=16%  Similarity=0.184  Sum_probs=236.6

Q ss_pred             CCccccCCccceeeEEEEe--c---CCCCeEEEEe---------ecCCCCCCeEEEEEeeeecchhhhhhhccCC----C
Q 018627            1 MSTSIKQPQVITCKAAVAW--G---AGQPLVVEEV---------EVNPPQPEEIRIKVVCTSLCRSDITAWETQA----I   62 (353)
Q Consensus         1 m~~~~~~~~~~~~~a~~~~--~---~~~~l~~~~~---------~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~   62 (353)
                      ||+   +++|.+|||+++.  +   ..+.++++++         |.|+|++|||||||++++||++|++.+.|.+    .
T Consensus         2 Ms~---m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~   78 (349)
T 3pi7_A            2 MSP---MTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRV   78 (349)
T ss_dssp             ------CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBC
T ss_pred             CCC---CCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCC
Confidence            664   3467799999999  3   2334777888         9999999999999999999999999998875    5


Q ss_pred             CCcccccceeEEEEEeCCCC-CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCcccc
Q 018627           63 FPRIFGHEASGIVESVGPGV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYH  141 (353)
Q Consensus        63 ~p~~~G~e~~G~V~~vG~~~-~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~  141 (353)
                      +|.++|||++|+|+++|+++ ++|++||||++...                          ..                 
T Consensus        79 ~p~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g--------------------------~~-----------------  115 (349)
T 3pi7_A           79 KGRPAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG--------------------------LS-----------------  115 (349)
T ss_dssp             TTSBCCSEEEEEEEEECSSHHHHHHTTCEEEEECT--------------------------TS-----------------
T ss_pred             CCCCccceEEEEEEEECCCccCCCCCCCEEEEecc--------------------------CC-----------------
Confidence            79999999999999999999 99999999998621                          00                 


Q ss_pred             ccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCC-CEEEEEcC-ChHHHHHHHHHHHCCCC
Q 018627          142 YCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKG-STVVIFGL-GTVGLSVAQGAKARGAS  219 (353)
Q Consensus       142 ~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g-~~vLV~Ga-g~vG~~a~~la~~~g~~  219 (353)
                        ..|+|+||+++|++.++++|+++++++||.+++.+.|||+++ +.++ ++| ++|||+|+ |++|++++|+|+++|+ 
T Consensus       116 --~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-  190 (349)
T 3pi7_A          116 --NWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMF-DIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-  190 (349)
T ss_dssp             --SCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHHH-HHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-
T ss_pred             --CCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHHH-HHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-
Confidence              125999999999999999999999999999999999999655 5566 666 78898865 9999999999999999 


Q ss_pred             eEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          220 RIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       220 ~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|+++++++++++.++++|++.+++++  +.++.+.+++.+++ ++|++|||+|.+ .+..++++++++ |+++.+|...
T Consensus       191 ~Vi~~~~~~~~~~~~~~~Ga~~~~~~~--~~~~~~~v~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~  266 (349)
T 3pi7_A          191 RPIVTVRRDEQIALLKDIGAAHVLNEK--APDFEATLREVMKAEQPRIFLDAVTGP-LASAIFNAMPKR-ARWIIYGRLD  266 (349)
T ss_dssp             EEEEEESCGGGHHHHHHHTCSEEEETT--STTHHHHHHHHHHHHCCCEEEESSCHH-HHHHHHHHSCTT-CEEEECCCSC
T ss_pred             EEEEEeCCHHHHHHHHHcCCCEEEECC--cHHHHHHHHHHhcCCCCcEEEECCCCh-hHHHHHhhhcCC-CEEEEEeccC
Confidence            999999999999999999999999987  57888999988876 999999999974 568899999997 9999999755


Q ss_pred             CCCceecch--hhhhcCcEEEeeecCCCCC------CCcHHHHHHHHHcCCCCC
Q 018627          299 LKPEVAAHY--GLFLSGRTLKGSLFGGWKP------KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       299 ~~~~~~~~~--~~~~~~~~i~g~~~~~~~~------~~~~~~~~~~l~~g~i~~  344 (353)
                      .. ...+..  ..+.+++++.|++.+.+..      .++++++++++++|+|++
T Consensus       267 ~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  319 (349)
T 3pi7_A          267 PD-ATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWST  319 (349)
T ss_dssp             CS-CCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC
T ss_pred             CC-CCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCccc
Confidence            42 223333  2345799999987654321      356888899999999854

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.2e-44  Score=338.89  Aligned_cols=281  Identities=19%  Similarity=0.276  Sum_probs=237.1

Q ss_pred             ccceeeEEEEecCCCC--eEE-EEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCC
Q 018627            9 QVITCKAAVAWGAGQP--LVV-EEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPG   81 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~--l~~-~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~   81 (353)
                      .+.+|||+++.+++.+  +++ +++|.|+|+++||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|++
T Consensus        26 ~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~  105 (351)
T 1yb5_A           26 GQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDN  105 (351)
T ss_dssp             --CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTT
T ss_pred             CcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCC
Confidence            4457999999987754  888 8999999999999999999999999999888764    46899999999999999999


Q ss_pred             CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEE
Q 018627           82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK  161 (353)
Q Consensus        82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~  161 (353)
                      +++|++||||++.+.                             .                  .|+|+||+++|++.+++
T Consensus       106 v~~~~vGdrV~~~~~-----------------------------~------------------~G~~aey~~v~~~~~~~  138 (351)
T 1yb5_A          106 ASAFKKGDRVFTSST-----------------------------I------------------SGGYAEYALAADHTVYK  138 (351)
T ss_dssp             CTTCCTTCEEEESCC-----------------------------S------------------SCSSBSEEEEEGGGEEE
T ss_pred             CCCCCCCCEEEEeCC-----------------------------C------------------CCcceeEEEECHHHeEE
Confidence            999999999987621                             0                  25999999999999999


Q ss_pred             CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc
Q 018627          162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT  240 (353)
Q Consensus       162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~  240 (353)
                      +|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++
T Consensus       139 ~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~  217 (351)
T 1yb5_A          139 LPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAH  217 (351)
T ss_dssp             CCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCS
T ss_pred             CCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCC
Confidence            99999999999999999999999977889999999999998 9999999999999999 899999999999999999999


Q ss_pred             eEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEee
Q 018627          241 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS  319 (353)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~  319 (353)
                      .++++.  +.++.+.+++.+++ ++|++|||+|. ..+..++++++++ |+++.+|.... ..++... .+.+++++.|+
T Consensus       218 ~~~d~~--~~~~~~~~~~~~~~~~~D~vi~~~G~-~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~-~~~~~~~i~g~  291 (351)
T 1yb5_A          218 EVFNHR--EVNYIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRGT-IEINPRD-TMAKESSIIGV  291 (351)
T ss_dssp             EEEETT--STTHHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCSC-EEECTHH-HHTTTCEEEEC
T ss_pred             EEEeCC--CchHHHHHHHHcCCCCcEEEEECCCh-HHHHHHHHhccCC-CEEEEEecCCC-CccCHHH-HHhCCcEEEEE
Confidence            988876  46778888887776 89999999997 4688899999997 99999996432 2333222 23569999998


Q ss_pred             ecCCCCCCCcHH----HHHHHHHcCCCCC
Q 018627          320 LFGGWKPKTDLP----SLVNRYLKKVRNT  344 (353)
Q Consensus       320 ~~~~~~~~~~~~----~~~~~l~~g~i~~  344 (353)
                      ...... .+++.    .+.+++++|++++
T Consensus       292 ~~~~~~-~~~~~~~~~~l~~~~~~g~l~~  319 (351)
T 1yb5_A          292 TLFSST-KEEFQQYAAALQAGMEIGWLKP  319 (351)
T ss_dssp             CGGGCC-HHHHHHHHHHHHHHHHHTCCCC
T ss_pred             EeecCC-HHHHHHHHHHHHHHHHCCCccC
Confidence            654322 23444    4556778888753

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.5e-45  Score=343.74  Aligned_cols=272  Identities=15%  Similarity=0.135  Sum_probs=216.6

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      .+|||+++.+..+.++++++|.|+|+++||||||.+++||++|++.+.|.+   .+|.++|||++|+|+++|+++++|++
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   82 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKML   82 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGT
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCC
Confidence            479999999533449999999999999999999999999999999988875   67999999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      ||||++.+..                          . .                  .|+|+||+++|++.++++|++++
T Consensus        83 GdrV~~~~~~--------------------------~-~------------------~G~~aey~~v~~~~~~~iP~~~~  117 (315)
T 3goh_A           83 GRRVAYHTSL--------------------------K-R------------------HGSFAEFTVLNTDRVMTLPDNLS  117 (315)
T ss_dssp             TCEEEEECCT--------------------------T-S------------------CCSSBSEEEEETTSEEECCTTSC
T ss_pred             CCEEEEeCCC--------------------------C-C------------------CcccccEEEEcHHHhccCcCCCC
Confidence            9999987311                          0 1                  25999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      +++||+++++++|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++ ++++++.++++|++++++   
T Consensus       118 ~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~---  191 (315)
T 3goh_A          118 FERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR---  191 (315)
T ss_dssp             HHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES---
T ss_pred             HHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc---
Confidence            999999999999999999 88999999999999999999999999999999 999998 999999999999998883   


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC----
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG----  323 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~----  323 (353)
                       +   .+.+    ++++|++|||+|++. ...++++++++ |+++.+|.......++.    +.+++.+.......    
T Consensus       192 -d---~~~v----~~g~Dvv~d~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  257 (315)
T 3goh_A          192 -E---PSQV----TQKYFAIFDAVNSQN-AAALVPSLKAN-GHIICIQDRIPAPIDPA----FTRTISYHEIALGALHDF  257 (315)
T ss_dssp             -S---GGGC----CSCEEEEECC--------TTGGGEEEE-EEEEEECCC--------------CCSEEEEECGGGHHHH
T ss_pred             -C---HHHh----CCCccEEEECCCchh-HHHHHHHhcCC-CEEEEEeCCCCccccch----hhhcceeeEEEeeccccc
Confidence             1   1222    459999999999854 57889999997 99999986543222211    12344443333221    


Q ss_pred             -CC-----CCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          324 -WK-----PKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       324 -~~-----~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                       ..     ..++++++++++++|+++  ++++
T Consensus       258 ~~~~~~~~~~~~~~~~~~l~~~g~l~--~~i~  287 (315)
T 3goh_A          258 GDRQDWQILMQQGEALLTLIAQGKME--IAAP  287 (315)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTSSC--CCCC
T ss_pred             CChhHHHHHHHHHHHHHHHHHCCCcc--cccc
Confidence             10     013478999999999986  4554

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=1.3e-44  Score=343.29  Aligned_cols=285  Identities=21%  Similarity=0.321  Sum_probs=232.8

Q ss_pred             CccceeeEEEEecCCCC---eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCC
Q 018627            8 PQVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGP   80 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~   80 (353)
                      .+|.+|||+++.+++.+   ++++++|.|+|+++||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++|+
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~  101 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGS  101 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECT
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCC
Confidence            35668999999999885   8999999999999999999999999999999988865    3689999999999999999


Q ss_pred             CCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627           81 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (353)
Q Consensus        81 ~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~  160 (353)
                      ++++|++||||++.+.                                               ..|+|+||+++|++.++
T Consensus       102 ~v~~~~vGdrV~~~~~-----------------------------------------------~~G~~aey~~v~~~~~~  134 (357)
T 1zsy_A          102 NVTGLKPGDWVIPANA-----------------------------------------------GLGTWRTEAVFSEEALI  134 (357)
T ss_dssp             TCCSCCTTCEEEESSS-----------------------------------------------CSCCSBSEEEEEGGGEE
T ss_pred             CCCCCCCCCEEEEcCC-----------------------------------------------CCccceeEEecCHHHcE
Confidence            9999999999988621                                               02599999999999999


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC-h---hhHHHHH
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-P---EKCEKAK  235 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~-~---~~~~~~~  235 (353)
                      ++|+++++++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +++++.++ +   ++++.++
T Consensus       135 ~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~  213 (357)
T 1zsy_A          135 QVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLK  213 (357)
T ss_dssp             EECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHH
T ss_pred             ECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHH
Confidence            999999999999999899999999978789999999999998 9999999999999999 56555443 2   3567889


Q ss_pred             hCCCceEeCCCCCCccHHHHHHHHhcC--CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hc
Q 018627          236 AFGVTEFLNPNDNNEPVQQVIKRITDG--GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LS  312 (353)
Q Consensus       236 ~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~  312 (353)
                      ++|++.++++.+   ...+.+.+.+.+  ++|++|||+|++. ...++++++++ |+++.+|.... ....++...+ .+
T Consensus       214 ~lGa~~vi~~~~---~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~  287 (357)
T 1zsy_A          214 SLGAEHVITEEE---LRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMAK-QPVVASVSLLIFK  287 (357)
T ss_dssp             HTTCSEEEEHHH---HHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEEEECCCCTT-CCBCCCHHHHHHS
T ss_pred             hcCCcEEEecCc---chHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEEEEEecCCC-CCCCCCHHHHHhc
Confidence            999999987631   112234444444  5999999999754 46789999997 99999986543 2233333333 57


Q ss_pred             CcEEEeeecCCCC-------CCCcHHHHHHHHHcCCCCCCC
Q 018627          313 GRTLKGSLFGGWK-------PKTDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       313 ~~~i~g~~~~~~~-------~~~~~~~~~~~l~~g~i~~~~  346 (353)
                      ++++.|++.+.+.       .++.++++++++++|++++..
T Consensus       288 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  328 (357)
T 1zsy_A          288 DLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAPA  328 (357)
T ss_dssp             CCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             CceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCcc
Confidence            9999998764321       024578999999999998764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=5.6e-44  Score=335.70  Aligned_cols=280  Identities=24%  Similarity=0.336  Sum_probs=237.5

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      |||+++.+++.+  ++++++|.|+|+++||||||.+++||++|++.+.|.+      .+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999988754  9999999999999999999999999999999988754      36899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||+..+.                             .                  .|+|+||+++|++.++++|+
T Consensus        82 ~~~GdrV~~~~~-----------------------------~------------------~G~~aey~~v~~~~~~~iP~  114 (333)
T 1wly_A           82 FTVGERVCTCLP-----------------------------P------------------LGAYSQERLYPAEKLIKVPK  114 (333)
T ss_dssp             CCTTCEEEECSS-----------------------------S------------------CCCSBSEEEEEGGGCEECCT
T ss_pred             CCCCCEEEEecC-----------------------------C------------------CCcceeEEEecHHHcEeCCC
Confidence            999999976521                             0                  15999999999999999999


Q ss_pred             CCChhh--hhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          165 IAPLEK--ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       165 ~l~~~~--aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      ++++++  ||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.
T Consensus       115 ~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~  193 (333)
T 1wly_A          115 DLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHH  193 (333)
T ss_dssp             TCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSE
T ss_pred             CCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCE
Confidence            999999  99999999999999977889999999999997 9999999999999999 9999999999999999999998


Q ss_pred             EeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-CceecchhhhhcC--cEEE
Q 018627          242 FLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSG--RTLK  317 (353)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~--~~i~  317 (353)
                      ++++.  +.++.+.+.+.+.+ ++|++|||+|. ..++.++++++++ |+++.+|..... ..+++....+.++  +++.
T Consensus       194 ~~d~~--~~~~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~  269 (333)
T 1wly_A          194 TINYS--TQDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHASGVADPIRVVEDLGVRGSLFITR  269 (333)
T ss_dssp             EEETT--TSCHHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE-EEEEECCCTTCCCCCCCHHHHTTTTTSCEEEC
T ss_pred             EEECC--CHHHHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC-CEEEEEecCCCCcCCCChhHhhhhcCCcEEEE
Confidence            88876  56778888877765 89999999998 7789999999997 999999986532 2233221223567  8898


Q ss_pred             eeecCCCCC----CCcHHHHHHHHHcCCCCC
Q 018627          318 GSLFGGWKP----KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       318 g~~~~~~~~----~~~~~~~~~~l~~g~i~~  344 (353)
                      |++...+..    .++++++++++++|++++
T Consensus       270 g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  300 (333)
T 1wly_A          270 PALWHYMSNRSEIDEGSKCLFDAVKAGVLHS  300 (333)
T ss_dssp             CCGGGGSCSHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             EeehhhccCHHHHHHHHHHHHHHHHCCCcCC
Confidence            876532211    136889999999999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=1e-43  Score=337.64  Aligned_cols=283  Identities=20%  Similarity=0.243  Sum_probs=241.4

Q ss_pred             CccceeeEEEEecCCC----CeEE-EEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEe
Q 018627            8 PQVITCKAAVAWGAGQ----PLVV-EEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESV   78 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~----~l~~-~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~v   78 (353)
                      +.+.+|||+++.+++.    .+++ +++|.|+|++|||||||.+++||++|++.+.|.+    .+|.++|||++|+|+++
T Consensus        19 ~~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~v   98 (362)
T 2c0c_A           19 YFQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVAL   98 (362)
T ss_dssp             HHCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEE
T ss_pred             cchhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEE
Confidence            3567899999999875    3889 9999999999999999999999999999988864    56899999999999999


Q ss_pred             CCCCC-CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC
Q 018627           79 GPGVT-EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG  157 (353)
Q Consensus        79 G~~~~-~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~  157 (353)
                      |++++ +|++||||++.                               .+                  |+|+||+++|++
T Consensus        99 G~~V~~~~~vGdrV~~~-------------------------------~~------------------G~~aey~~v~~~  129 (362)
T 2c0c_A           99 GLSASARYTVGQAVAYM-------------------------------AP------------------GSFAEYTVVPAS  129 (362)
T ss_dssp             CTTGGGTCCTTCEEEEE-------------------------------CS------------------CCSBSEEEEEGG
T ss_pred             CCCccCCCCCCCEEEEc-------------------------------cC------------------CcceeEEEEcHH
Confidence            99999 99999999886                               11                  499999999999


Q ss_pred             ceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          158 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       158 ~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      .++++|+. + .++|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.+++
T Consensus       130 ~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~  206 (362)
T 2c0c_A          130 IATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS  206 (362)
T ss_dssp             GCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             HeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence            99999996 3 4677888899999999988889999999999996 9999999999999999 89999999999999999


Q ss_pred             CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC------ce---ecch
Q 018627          237 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP------EV---AAHY  307 (353)
Q Consensus       237 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~------~~---~~~~  307 (353)
                      +|++.++++.  +.++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|......      .+   .+..
T Consensus       207 ~Ga~~~~~~~--~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~  282 (362)
T 2c0c_A          207 LGCDRPINYK--TEPVGTVLKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLPA  282 (362)
T ss_dssp             TTCSEEEETT--TSCHHHHHHHHCTTCEEEEEECSCT-HHHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTHHH
T ss_pred             cCCcEEEecC--ChhHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccccHH
Confidence            9999998886  4677888887765589999999998 6789999999997 9999999754311      00   1122


Q ss_pred             hhhhcCcEEEeeecCCCC--CCCcHHHHHHHHHcCCCCCCC
Q 018627          308 GLFLSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKVRNTRK  346 (353)
Q Consensus       308 ~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~g~i~~~~  346 (353)
                      ..+.+++++.|++...+.  ..++++++++++++|++++..
T Consensus       283 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  323 (362)
T 2c0c_A          283 KLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV  323 (362)
T ss_dssp             HHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCE
T ss_pred             HHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeee
Confidence            234569999998765432  135689999999999998753

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=8.7e-44  Score=334.74  Aligned_cols=281  Identities=20%  Similarity=0.194  Sum_probs=240.4

Q ss_pred             ceeeEEEEec------CCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccc----eeEEEEEe
Q 018627           11 ITCKAAVAWG------AGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHE----ASGIVESV   78 (353)
Q Consensus        11 ~~~~a~~~~~------~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e----~~G~V~~v   78 (353)
                      ++||||++..      ..+.++++++|.|+|++|||||||++++||++|...+.+..  .+|.++|||    ++|+|++.
T Consensus         6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~~~~p~~~G~e~g~~~~G~V~~~   85 (336)
T 4b7c_A            6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARSYIPPVGIGEVMRALGVGKVLVS   85 (336)
T ss_dssp             CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCCSSCCCCTTSBCCCEEEEEEEEE
T ss_pred             ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccccCCCCCCCcccCCceEEEEEec
Confidence            4799999985      12349999999999999999999999999999988776543  568888888    79999994


Q ss_pred             CCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCc
Q 018627           79 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC  158 (353)
Q Consensus        79 G~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~  158 (353)
                        ++++|++||||++.                                                   |+|+||+++|++.
T Consensus        86 --~v~~~~vGdrV~~~---------------------------------------------------G~~aey~~v~~~~  112 (336)
T 4b7c_A           86 --KHPGFQAGDYVNGA---------------------------------------------------LGVQDYFIGEPKG  112 (336)
T ss_dssp             --CSTTCCTTCEEEEE---------------------------------------------------CCSBSEEEECCTT
T ss_pred             --CCCCCCCCCEEecc---------------------------------------------------CCceEEEEechHH
Confidence              57899999999875                                                   5899999999999


Q ss_pred             eEECCCCCChhhh--hhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-
Q 018627          159 AVKVSSIAPLEKI--CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-  234 (353)
Q Consensus       159 v~~iP~~l~~~~a--a~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-  234 (353)
                      ++++|+++++.++  ++++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.+ 
T Consensus       113 ~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~  191 (336)
T 4b7c_A          113 FYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLV  191 (336)
T ss_dssp             CEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             eEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence            9999999988876  7889999999999988899999999999998 9999999999999999 999999999999999 


Q ss_pred             HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-----Cceecchhh
Q 018627          235 KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-----PEVAAHYGL  309 (353)
Q Consensus       235 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~  309 (353)
                      +++|++.++++.  +.++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|.....     ...+++...
T Consensus       192 ~~~g~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~  267 (336)
T 4b7c_A          192 EELGFDGAIDYK--NEDLAAGLKRECPKGIDVFFDNVGG-EILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPANYLS  267 (336)
T ss_dssp             HTTCCSEEEETT--TSCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGGC------CCTTTTH
T ss_pred             HHcCCCEEEECC--CHHHHHHHHHhcCCCceEEEECCCc-chHHHHHHHHhhC-CEEEEEeecccccCCcccccchhHHH
Confidence            899999999887  5778888888886699999999996 6789999999997 999999976521     112333333


Q ss_pred             -hhcCcEEEeeecCCCCC--CCcHHHHHHHHHcCCCCCCCCcc
Q 018627          310 -FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       310 -~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                       +.+++++.|++.+.+..  .+++.++++++++|++++...++
T Consensus       268 ~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  310 (336)
T 4b7c_A          268 LLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIV  310 (336)
T ss_dssp             HHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEE
T ss_pred             HHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeee
Confidence             35699999988765421  25788999999999999887654

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.5e-43  Score=331.99  Aligned_cols=279  Identities=20%  Similarity=0.217  Sum_probs=236.9

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      |||+++.+++.+  ++++++|.|+|+++||||||.+++||++|++.+.|.+   .+|.++|||++|+|+++|+++++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999987754  8999999999999999999999999999999988865   47899999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      |||| +.+..                            .                  .|+|+||+++|++.++++|++++
T Consensus        82 GdrV-~~~g~----------------------------~------------------~G~~aey~~v~~~~~~~iP~~l~  114 (327)
T 1qor_A           82 GDRV-VYAQS----------------------------A------------------LGAYSSVHNIIADKAAILPAAIS  114 (327)
T ss_dssp             TCEE-EESCC----------------------------S------------------SCCSBSEEEEEGGGEEECCTTSC
T ss_pred             CCEE-EECCC----------------------------C------------------CceeeeEEEecHHHcEECCCCCC
Confidence            9999 43100                            0                  15999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      +++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++|++.++++.
T Consensus       115 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~  193 (327)
T 1qor_A          115 FEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYR  193 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETT
T ss_pred             HHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECC
Confidence            99999999999999999977889999999999996 9999999999999999 999999999999999999999888876


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-Cceecchhhhhc-CcEEEeeecCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLS-GRTLKGSLFGG  323 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~-~~~i~g~~~~~  323 (353)
                        +.++.+.+.+.+.+ ++|++|||+| ...++.++++++++ |+++.+|..... ..++.... +.+ ++++.+...+.
T Consensus       194 --~~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  268 (327)
T 1qor_A          194 --EEDLVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR-GLMVSFGNSSGAVTGVNLGIL-NQKGSLYVTRPSLQG  268 (327)
T ss_dssp             --TSCHHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE-EEEEECCCTTCCCCCBCTHHH-HHTTSCEEECCCHHH
T ss_pred             --CccHHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC-CEEEEEecCCCCCCccCHHHH-hhccceEEEccchhh
Confidence              56778888887766 8999999999 57889999999997 999999986542 22333222 345 67777554322


Q ss_pred             CC-----CCCcHHHHHHHHHcCCCCC
Q 018627          324 WK-----PKTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       324 ~~-----~~~~~~~~~~~l~~g~i~~  344 (353)
                      +.     ..++++++++++++|++++
T Consensus       269 ~~~~~~~~~~~~~~~~~l~~~g~l~~  294 (327)
T 1qor_A          269 YITTREELTEASNELFSLIASGVIKV  294 (327)
T ss_dssp             HCCSHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             hcCCHHHHHHHHHHHHHHHHCCCccc
Confidence            21     1245789999999999975

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=2e-44  Score=337.41  Aligned_cols=279  Identities=17%  Similarity=0.167  Sum_probs=230.1

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+++++  ++++++|.|+|++|||||||.+++||++|++.+.|..    .+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            899999999986  8999999999999999999999999999999998865    578999999999999998  57899


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||||++.+..                       .|..                   ..|+|+||+++|++.++++|+++
T Consensus        79 vGdrV~~~~~~-----------------------~g~~-------------------~~G~~aey~~v~~~~~~~iP~~~  116 (324)
T 3nx4_A           79 AGQEVLLTGWG-----------------------VGEN-------------------HWGGLAERARVKGDWLVALPAGL  116 (324)
T ss_dssp             TTCEEEEECTT-----------------------BTTT-------------------BCCSSBSEEEECGGGCEECCTTC
T ss_pred             CCCEEEEcccc-----------------------cCCC-------------------CCCceeeEEecCHHHcEECCCCC
Confidence            99999986310                       1111                   13599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHH--HhccCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE
Q 018627          167 PLEKICLLSCGLSAGLGAAW--NVADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF  242 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~--~~~~~~~g~-~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~  242 (353)
                      ++++||.+++.+.|||+++.  ...++++++ +|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|++++
T Consensus       117 ~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v  195 (324)
T 3nx4_A          117 SSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRI  195 (324)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEE
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEE
Confidence            99999999999999999885  345566633 4999998 9999999999999999 99999999999999999999999


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeec
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLF  321 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~  321 (353)
                      +++++.  +.   +++++++++|++|||+|+ ..++.++++++++ |+++.+|.... ...++.... +.+++++.|++.
T Consensus       196 i~~~~~--~~---~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~g~~~  267 (324)
T 3nx4_A          196 LSRDEF--AE---SRPLEKQLWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGG-FALPTTVMPFILRNVRLQGVDS  267 (324)
T ss_dssp             EEGGGS--SC---CCSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTC-SEEEEESHHHHHHCCEEEECCS
T ss_pred             EecCCH--HH---HHhhcCCCccEEEECCCc-HHHHHHHHHHhcC-CEEEEEecCCC-CCCCCCHHHHhhcCeEEEEEec
Confidence            987632  21   444455689999999997 4889999999997 99999998765 333444333 357999999875


Q ss_pred             CCCCC---CCcHHHHHHHHHcCCCCC
Q 018627          322 GGWKP---KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       322 ~~~~~---~~~~~~~~~~l~~g~i~~  344 (353)
                      ..+..   .+.++++++++++|++++
T Consensus       268 ~~~~~~~~~~~~~~~~~l~~~g~l~~  293 (324)
T 3nx4_A          268 VMTPPARRAEAWARLVKDLPESFYAQ  293 (324)
T ss_dssp             TTCCHHHHHHHHHHHHHHSCHHHHHH
T ss_pred             cccChHHHHHHHHHHHHHHHcCCCCC
Confidence            44321   145777788888777653

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=4.6e-42  Score=325.62  Aligned_cols=285  Identities=15%  Similarity=0.197  Sum_probs=238.0

Q ss_pred             CccceeeEEEE-ecC---CC----CeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhcc----CC----CCCcccccc
Q 018627            8 PQVITCKAAVA-WGA---GQ----PLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWET----QA----IFPRIFGHE   70 (353)
Q Consensus         8 ~~~~~~~a~~~-~~~---~~----~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g----~~----~~p~~~G~e   70 (353)
                      .+|++|||+++ ..+   +.    .++++++|.|+| ++|||||||.+++||++|++.+.+    .+    .+|.++|||
T Consensus         4 ~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E   83 (357)
T 2zb4_A            4 AAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGG   83 (357)
T ss_dssp             --CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEE
T ss_pred             cccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCcccccc
Confidence            46679999999 565   43    399999999999 999999999999999999887664    22    457899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceee
Q 018627           71 ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE  150 (353)
Q Consensus        71 ~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~  150 (353)
                      ++|+|++  +++++|++||||++..                                                  |+|+|
T Consensus        84 ~~G~V~~--~~v~~~~vGdrV~~~~--------------------------------------------------G~~ae  111 (357)
T 2zb4_A           84 GIGIIEE--SKHTNLTKGDFVTSFY--------------------------------------------------WPWQT  111 (357)
T ss_dssp             EEEEEEE--ECSTTCCTTCEEEEEE--------------------------------------------------EESBS
T ss_pred             EEEEEEe--cCCCCCCCCCEEEecC--------------------------------------------------CCcEE
Confidence            9999999  8889999999999861                                                  48999


Q ss_pred             eEEEeCCceEECCCCC-----ChhhhhhhchhhhHHHHHHHHhccCCCC--CEEEEEcC-ChHHHHHHHHHHHCCCCeEE
Q 018627          151 YTVVHSGCAVKVSSIA-----PLEKICLLSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRII  222 (353)
Q Consensus       151 ~~~~~~~~v~~iP~~l-----~~~~aa~l~~~~~ta~~al~~~~~~~~g--~~vLV~Ga-g~vG~~a~~la~~~g~~~vi  222 (353)
                      |+++|++.++++|+++     +++ +++++++++|||+++.+.+++++|  ++|||+|+ |++|++++|+++..|+++|+
T Consensus       112 y~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi  190 (357)
T 2zb4_A          112 KVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVV  190 (357)
T ss_dssp             EEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEE
T ss_pred             EEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEE
Confidence            9999999999999999     555 778888999999999888999999  99999998 99999999999999987899


Q ss_pred             EEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-
Q 018627          223 GVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-  300 (353)
Q Consensus       223 ~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-  300 (353)
                      ++++++++++.+++ +|++.++++.  +.++.+.+++.+.+++|++|||+|. ..+..++++++++ |+++.+|..... 
T Consensus       191 ~~~~~~~~~~~~~~~~g~~~~~d~~--~~~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~  266 (357)
T 2zb4_A          191 GICGTHEKCILLTSELGFDAAINYK--KDNVAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQISQYN  266 (357)
T ss_dssp             EEESCHHHHHHHHHTSCCSEEEETT--TSCHHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCGGGTT
T ss_pred             EEeCCHHHHHHHHHHcCCceEEecC--chHHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCccccc
Confidence            99999999998887 9999988876  4678888888776689999999996 7789999999997 999999975431 


Q ss_pred             Cceecc--------hhhhhcCcEEEeeecCCCC--CCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          301 PEVAAH--------YGLFLSGRTLKGSLFGGWK--PKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       301 ~~~~~~--------~~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      ..+++.        ...+.+++++.|+....+.  ..++++++++++++|++++..+++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~  325 (357)
T 2zb4_A          267 KDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVI  325 (357)
T ss_dssp             SCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCCEEEE
T ss_pred             cCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCcccee
Confidence            123321        1223569999988654321  135689999999999999876654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=4.6e-42  Score=327.75  Aligned_cols=285  Identities=19%  Similarity=0.208  Sum_probs=230.2

Q ss_pred             CccceeeEEEEecCCCC--eEE-EEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC------------------CCCc
Q 018627            8 PQVITCKAAVAWGAGQP--LVV-EEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA------------------IFPR   65 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~~--l~~-~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~------------------~~p~   65 (353)
                      +++++|||+++.+++.+  +++ +++|.|+| +++||||||.+++||++|++.+.|..                  .+|.
T Consensus        17 ~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~   96 (375)
T 2vn8_A           17 NLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPL   96 (375)
T ss_dssp             -CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSB
T ss_pred             ccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCc
Confidence            36678999999988754  888 99999995 99999999999999999999887741                  2789


Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCc
Q 018627           66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV  145 (353)
Q Consensus        66 ~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~  145 (353)
                      ++|||++|+|+++|+++++|++||||++.+...                           .                  .
T Consensus        97 v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~---------------------------~------------------~  131 (375)
T 2vn8_A           97 TLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPW---------------------------K------------------Q  131 (375)
T ss_dssp             CCCCEEEEEEEEECTTCCSCCTTCEEEEECCTT---------------------------S------------------C
T ss_pred             ccceeeeEEEEEeCCCCCCCCCCCEEEEecCCC---------------------------C------------------C
Confidence            999999999999999999999999999863110                           1                  2


Q ss_pred             cceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhcc----CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCe
Q 018627          146 SSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD----ISKGSTVVIFGL-GTVGLSVAQGAKARGASR  220 (353)
Q Consensus       146 g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~----~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~  220 (353)
                      |+|+||+++|++.++++|+++++++||+++++++|||+++.+.++    +++|++|||+|+ |++|++++|+|+.+|+ +
T Consensus       132 G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~  210 (375)
T 2vn8_A          132 GTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-H  210 (375)
T ss_dssp             CSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-E
T ss_pred             ccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-E
Confidence            599999999999999999999999999999999999999977788    899999999995 9999999999999999 8


Q ss_pred             EEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEcCCCC
Q 018627          221 IIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       221 vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      |++++ ++++++.++++|++.++++.  +.++.+.+++.  +++|++|||+|.+ ..+..++++++++ |+++.+|....
T Consensus       211 Vi~~~-~~~~~~~~~~lGa~~v~~~~--~~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~  284 (375)
T 2vn8_A          211 VTAVC-SQDASELVRKLGADDVIDYK--SGSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVTPFL  284 (375)
T ss_dssp             EEEEE-CGGGHHHHHHTTCSEEEETT--SSCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCCSHH
T ss_pred             EEEEe-ChHHHHHHHHcCCCEEEECC--chHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCCCcc
Confidence            99987 67889999999999999886  45677666653  4899999999986 4567888899997 99999997532


Q ss_pred             CCcee-----cch----hhh-h-------cCcEEEeeecCCCCCCCcHHHHHHHHHcCCCCCCCCcc
Q 018627          300 KPEVA-----AHY----GLF-L-------SGRTLKGSLFGGWKPKTDLPSLVNRYLKKVRNTRKPSC  349 (353)
Q Consensus       300 ~~~~~-----~~~----~~~-~-------~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~~~~li~  349 (353)
                      . ...     ...    ..+ .       ++..+.+...  ....++++++++++++|+++  ++++
T Consensus       285 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~--~~i~  346 (375)
T 2vn8_A          285 L-NMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR--PVIE  346 (375)
T ss_dssp             H-HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC--CCEE
T ss_pred             c-ccccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc--cCcC
Confidence            1 110     000    011 1       3334433221  11235689999999999986  4554

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=8.3e-43  Score=327.27  Aligned_cols=283  Identities=19%  Similarity=0.188  Sum_probs=225.2

Q ss_pred             cceeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCC
Q 018627           10 VITCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus        10 ~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      +.+|||+++.+++.  .++++++|.|+|+++||||||.+++||++|++.+.|..    .+|.++|||++|+|+++|  ++
T Consensus         2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~~--v~   79 (330)
T 1tt7_A            2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSN--DP   79 (330)
T ss_dssp             CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEECS--ST
T ss_pred             CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEcC--CC
Confidence            34799999998873  49999999999999999999999999999999988854    478999999999999964  67


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      +|++||||++.+..                       .|..                   ..|+|+||+++|++.++++|
T Consensus        80 ~~~vGdrV~~~~~~-----------------------~g~~-------------------~~G~~aey~~v~~~~~~~iP  117 (330)
T 1tt7_A           80 RFAEGDEVIATSYE-----------------------LGVS-------------------RDGGLSEYASVPGDWLVPLP  117 (330)
T ss_dssp             TCCTTCEEEEESTT-----------------------BTTT-------------------BCCSSBSSEEECGGGEEECC
T ss_pred             CCCCCCEEEEcccc-----------------------cCCC-------------------CCccceeEEEecHHHeEECC
Confidence            89999999986310                       0110                   12599999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHH--HhccCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAW--NVADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV  239 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~--~~~~~~~g~-~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~  239 (353)
                      +++++++||.+++++.|||.++.  +..++++|+ +|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+
T Consensus       118 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa  196 (330)
T 1tt7_A          118 QNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGA  196 (330)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTC
T ss_pred             CCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC
Confidence            99999999999999999998874  346788986 9999998 9999999999999999 79999999999999999999


Q ss_pred             ceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEe
Q 018627          240 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKG  318 (353)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g  318 (353)
                      +.++++.+  .+ .+.+++..++++|++|||+|+ ..+..++++++++ |+++.+|.... ...+++... +.+++++.|
T Consensus       197 ~~v~~~~~--~~-~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~g  270 (330)
T 1tt7_A          197 SEVISRED--VY-DGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGG-GEVPATVYPFILRGVSLLG  270 (330)
T ss_dssp             SEEEEHHH--HC-SSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSC-SCEEECSHHHHTSCCEEEE
T ss_pred             cEEEECCC--ch-HHHHHHhhcCCccEEEECCcH-HHHHHHHHhhcCC-CEEEEEecCCC-CccCcchHHHHhcCeEEEE
Confidence            99887541  11 111223334489999999998 5789999999997 99999998654 233333332 357999998


Q ss_pred             eecCCCCC---CCcHHHHHHHHHcCCCC
Q 018627          319 SLFGGWKP---KTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       319 ~~~~~~~~---~~~~~~~~~~l~~g~i~  343 (353)
                      ++......   .+.++++++++++|+++
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~  298 (330)
T 1tt7_A          271 IDSVYCPMDVRAAVWERMSSDLKPDQLL  298 (330)
T ss_dssp             CCSSSCCHHHHHHHHHHTTTTSCCSCST
T ss_pred             EeccccCHHHHHHHHHHHHHHHhcCCcc
Confidence            85332211   12455666777777764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.4e-42  Score=322.05  Aligned_cols=258  Identities=19%  Similarity=0.223  Sum_probs=211.5

Q ss_pred             eeeEEEEecCCC--CeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCC
Q 018627           12 TCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        12 ~~~a~~~~~~~~--~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      +|||+++.+++.  .++++++|.|+|+++||||||.+++||++|++.+.|..    .+|.++|||++|+|++.  ++++|
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~   80 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRF   80 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSC
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCC
Confidence            699999999874  38999999999999999999999999999999988753    47899999999999995  46889


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||||++....                       .|..                   ..|+|+||+++|++.++++|++
T Consensus        81 ~vGdrV~~~~~~-----------------------~g~~-------------------~~G~~aey~~v~~~~~~~~P~~  118 (328)
T 1xa0_A           81 REGDEVIATGYE-----------------------IGVT-------------------HFGGYSEYARLHGEWLVPLPKG  118 (328)
T ss_dssp             CTTCEEEEESTT-----------------------BTTT-------------------BCCSSBSEEEECGGGCEECCTT
T ss_pred             CCCCEEEEcccc-----------------------CCCC-------------------CCccceeEEEechHHeEECCCC
Confidence            999999986310                       0100                   1259999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHH--HhccCCCCC-EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          166 APLEKICLLSCGLSAGLGAAW--NVADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~--~~~~~~~g~-~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      +++++|+.+++++.|||.++.  +..++++|+ +|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.
T Consensus       119 l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~  197 (328)
T 1xa0_A          119 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE  197 (328)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcE
Confidence            999999999999999998874  346788986 9999998 9999999999999999 7999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeee
Q 018627          242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL  320 (353)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  320 (353)
                      ++++.+  .+ .+.+++..++++|++|||+|+ ..+..++++++++ |+++.+|.... ...+++... +.+++++.|+.
T Consensus       198 ~i~~~~--~~-~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i~g~~  271 (328)
T 1xa0_A          198 VLARED--VM-AERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGG-AEVPTTVHPFILRGVSLLGID  271 (328)
T ss_dssp             EEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSS-SCCCCCSHHHHHTTCEEEECC
T ss_pred             EEecCC--cH-HHHHHHhcCCcccEEEECCcH-HHHHHHHHhhccC-CEEEEEeecCC-CCCCCchhhhhhcCceEEEEe
Confidence            988763  22 334445444589999999998 5789999999997 99999998654 222333222 35799999875

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.5e-42  Score=331.53  Aligned_cols=259  Identities=15%  Similarity=0.193  Sum_probs=217.9

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccC-----------------------------
Q 018627           10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ-----------------------------   60 (353)
Q Consensus        10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~-----------------------------   60 (353)
                      ..+|||++.......++++++|.|+|++|||||||.+++||++|++.+.|.                             
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            457999998655556999999999999999999999999999999988774                             


Q ss_pred             ---CCCCcccccceeEEEEEeCCCC-CCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccC
Q 018627           61 ---AIFPRIFGHEASGIVESVGPGV-TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKG  136 (353)
Q Consensus        61 ---~~~p~~~G~e~~G~V~~vG~~~-~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~  136 (353)
                         ..+|.++|||++|+|+++|+++ ++|++||||++.+                               +         
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-------------------------------~---------  124 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-------------------------------G---------  124 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-------------------------------S---------
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-------------------------------C---------
Confidence               1368899999999999999999 8899999999862                               1         


Q ss_pred             CccccccCccceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE--cCChHHHHHHHHHH
Q 018627          137 KPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF--GLGTVGLSVAQGAK  214 (353)
Q Consensus       137 ~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~--Gag~vG~~a~~la~  214 (353)
                               |+|+||+++|++.++++|+++++++||++++...|||+++ +... ++|++|||+  |+|++|++++|+|+
T Consensus       125 ---------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a~  193 (379)
T 3iup_A          125 ---------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQICL  193 (379)
T ss_dssp             ---------CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHHH
T ss_pred             ---------CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHHH
Confidence                     4999999999999999999999999999999999999876 4445 899999999  44999999999999


Q ss_pred             HCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhc-----cC-
Q 018627          215 ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCC-----DG-  287 (353)
Q Consensus       215 ~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~-----~~-  287 (353)
                      ++|+ +|++++++++|++.++++|++++++++  +.++.+.+++.+++ ++|++|||+|++.....++++++     ++ 
T Consensus       194 ~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~--~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G  270 (379)
T 3iup_A          194 KDGI-KLVNIVRKQEQADLLKAQGAVHVCNAA--SPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAR  270 (379)
T ss_dssp             HHTC-CEEEEESSHHHHHHHHHTTCSCEEETT--STTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCC
T ss_pred             HCCC-EEEEEECCHHHHHHHHhCCCcEEEeCC--ChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhcccc
Confidence            9999 899999999999999999999999987  57889999998887 99999999998777788888875     43 


Q ss_pred             ---------CceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627          288 ---------WGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW  324 (353)
Q Consensus       288 ---------~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  324 (353)
                               .|+++.+|.... ..+++... +.+++++.|++.+.+
T Consensus       271 ~~~~~G~~~~g~iv~~G~~~~-~~~~~~~~-~~~~~~i~g~~~~~~  314 (379)
T 3iup_A          271 EYSRYGSTTHKQVYLYGGLDT-SPTEFNRN-FGMAWGMGGWLLFPF  314 (379)
T ss_dssp             SCCTTCCCSCEEEEECCCSEE-EEEEECCC-SCSCEEEEECCHHHH
T ss_pred             ceeecccccCceEEEecCCCC-Cccccccc-cccceEEEEEEeeee
Confidence                     045555554322 23333322 456899999876554

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=3.3e-40  Score=309.97  Aligned_cols=283  Identities=17%  Similarity=0.202  Sum_probs=232.7

Q ss_pred             cceeeEEEEecC--C----CCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCC
Q 018627           10 VITCKAAVAWGA--G----QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus        10 ~~~~~a~~~~~~--~----~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      +++|||+++.+.  +    +.++++++|.|+|++|||||||.+++||+.|.. +.....+|.++|||.+|+|++.  +++
T Consensus         5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~-~~~~~~~p~~~g~e~~G~Vv~~--~v~   81 (333)
T 1v3u_A            5 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-ASKRLKEGAVMMGQQVARVVES--KNS   81 (333)
T ss_dssp             CCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHH-HTTTCCTTSBCCCCEEEEEEEE--SCT
T ss_pred             cccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHcc-ccCcCCCCcccccceEEEEEec--CCC
Confidence            468999999874  3    339999999999999999999999999999873 3232367889999999999995  578


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      +|++||||++.                                                   |+|+||+++|.+.++++|
T Consensus        82 ~~~vGdrV~~~---------------------------------------------------g~~aey~~v~~~~~~~iP  110 (333)
T 1v3u_A           82 AFPAGSIVLAQ---------------------------------------------------SGWTTHFISDGKGLEKLL  110 (333)
T ss_dssp             TSCTTCEEEEC---------------------------------------------------CCSBSEEEESSTTEEECC
T ss_pred             CCCCCCEEEec---------------------------------------------------CceEEEEEechHHeEEcC
Confidence            89999999875                                                   489999999999999999


Q ss_pred             CC----CChhh-hhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          164 SI----APLEK-ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       164 ~~----l~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      ++    +++++ +|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++.++++
T Consensus       111 ~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~  189 (333)
T 1v3u_A          111 TEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQI  189 (333)
T ss_dssp             --CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT
T ss_pred             cccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc
Confidence            97    88888 48899999999999988889999999999998 9999999999999999 999999999999999999


Q ss_pred             CCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC----cee-cchh-hhh
Q 018627          238 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP----EVA-AHYG-LFL  311 (353)
Q Consensus       238 G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~----~~~-~~~~-~~~  311 (353)
                      |++.++++.+ ..++.+.+.+.+.+++|++||++|. ..+..++++++++ |+++.+|......    ... .... .++
T Consensus       190 g~~~~~d~~~-~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  266 (333)
T 1v3u_A          190 GFDAAFNYKT-VNSLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIY  266 (333)
T ss_dssp             TCSEEEETTS-CSCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCCC-------CCBCCCHHHHHH
T ss_pred             CCcEEEecCC-HHHHHHHHHHHhCCCCeEEEECCCh-HHHHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcCHHHHhh
Confidence            9988888762 2677888887766689999999997 5688999999997 9999999765311    111 1222 235


Q ss_pred             cCcEEEeeecCCCCC---CCcHHHHHHHHHcCCCCCCCCccC
Q 018627          312 SGRTLKGSLFGGWKP---KTDLPSLVNRYLKKVRNTRKPSCG  350 (353)
Q Consensus       312 ~~~~i~g~~~~~~~~---~~~~~~~~~~l~~g~i~~~~li~~  350 (353)
                      +++++.|+..+.+..   .++++++++++++|++++..++++
T Consensus       267 ~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  308 (333)
T 1v3u_A          267 KQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTK  308 (333)
T ss_dssp             TTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred             cCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCcccccc
Confidence            699999987655421   256788999999999998876653

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=8.8e-41  Score=309.75  Aligned_cols=260  Identities=19%  Similarity=0.214  Sum_probs=217.4

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |||+++.+++++..++++|.|+|+++||||||.+++||++|++.+.|.+    .+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            7899999999876677999999999999999999999999999988864    468999999999997           9


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL  168 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~  168 (353)
                      |||++.+.                                                .|+|+||+++|++.++++|+++++
T Consensus        70 drV~~~~~------------------------------------------------~G~~aey~~v~~~~~~~iP~~~~~  101 (302)
T 1iz0_A           70 RRYAALVP------------------------------------------------QGGLAERVAVPKGALLPLPEGLSP  101 (302)
T ss_dssp             EEEEEECS------------------------------------------------SCCSBSEEEEEGGGCEECCTTCCH
T ss_pred             cEEEEecC------------------------------------------------CcceeeEEEEcHHHcEeCCCCCCH
Confidence            99998631                                                159999999999999999999999


Q ss_pred             hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      ++||++++++.|||+++.+.. +++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.++++. 
T Consensus       102 ~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~-  178 (302)
T 1iz0_A          102 EEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYA-  178 (302)
T ss_dssp             HHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGG-
T ss_pred             HHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECC-
Confidence            999999999999999997677 999999999998 9999999999999999 999999999999999999999988765 


Q ss_pred             CC-ccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCC-ceecchhhhhcCcEEEeeecCCC-
Q 018627          248 NN-EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP-EVAAHYGLFLSGRTLKGSLFGGW-  324 (353)
Q Consensus       248 ~~-~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~~i~g~~~~~~-  324 (353)
                       + .++.+.+     +++|++|| +|. ..+..++++++++ |+++.+|...... .+++.. .+.+++++.|+....+ 
T Consensus       179 -~~~~~~~~~-----~~~d~vid-~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~  248 (302)
T 1iz0_A          179 -EVPERAKAW-----GGLDLVLE-VRG-KEVEESLGLLAHG-GRLVYIGAAEGEVAPIPPLR-LMRRNLAVLGFWLTPLL  248 (302)
T ss_dssp             -GHHHHHHHT-----TSEEEEEE-CSC-TTHHHHHTTEEEE-EEEEEC-------CCCCTTH-HHHTTCEEEECCHHHHT
T ss_pred             -cchhHHHHh-----cCceEEEE-CCH-HHHHHHHHhhccC-CEEEEEeCCCCCCCCcCHHH-HHhCCCeEEEEeccchh
Confidence             3 3444433     57999999 998 6789999999997 9999999865421 233322 2457999999875432 


Q ss_pred             CCCCcHHHHHH---HHHcCCCCC
Q 018627          325 KPKTDLPSLVN---RYLKKVRNT  344 (353)
Q Consensus       325 ~~~~~~~~~~~---~l~~g~i~~  344 (353)
                      ...++++++++   ++++|++++
T Consensus       249 ~~~~~~~~~~~~~~l~~~g~l~~  271 (302)
T 1iz0_A          249 REGALVEEALGFLLPRLGRELRP  271 (302)
T ss_dssp             TCHHHHHHHHHHHGGGBTTTBCC
T ss_pred             hhHHHHHHHHhhhHHHHcCCccc
Confidence            12467889999   999999864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.3e-39  Score=336.68  Aligned_cols=273  Identities=18%  Similarity=0.211  Sum_probs=230.5

Q ss_pred             EEEEecCCCC--eEEEEeec--CCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCCCCCCCe
Q 018627           15 AAVAWGAGQP--LVVEEVEV--NPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFNEGEH   90 (353)
Q Consensus        15 a~~~~~~~~~--l~~~~~~~--p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~~~vGd~   90 (353)
                      .+.+..++.+  +++.+.|.  |+|++|||+|||.++|||++|++.+.|.++.|.++|||++|+|+++|++|++|++|||
T Consensus       212 ~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~~~~~lG~E~aG~V~~vG~~V~~~~vGDr  291 (795)
T 3slk_A          212 RLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPGVASLGSEGAGVVVETGPGVTGLAPGDR  291 (795)
T ss_dssp             CEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCSSCCCSCCCEEEEEEEECSSCCSSCTTCE
T ss_pred             EEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCCCCccccceeEEEEEEeCCCCCcCCCCCE
Confidence            4455555543  88888774  6789999999999999999999999998877889999999999999999999999999


Q ss_pred             EEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhh
Q 018627           91 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK  170 (353)
Q Consensus        91 V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~  170 (353)
                      |+++                               .+                  |+|+||++++++.++++|+++++++
T Consensus       292 V~~~-------------------------------~~------------------G~~ae~~~v~~~~~~~iP~~ls~~~  322 (795)
T 3slk_A          292 VMGM-------------------------------IP------------------KAFGPLAVADHRMVTRIPAGWSFAR  322 (795)
T ss_dssp             EEEC-------------------------------CS------------------SCSSSEEEEETTSEEECCTTCCHHH
T ss_pred             EEEE-------------------------------ec------------------CCCcCEEEeehHHEEECCCCCCHHH
Confidence            9886                               22                  4899999999999999999999999


Q ss_pred             hhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC
Q 018627          171 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN  249 (353)
Q Consensus       171 aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~  249 (353)
                      ||.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++ |.+.++ +|++++++++  +
T Consensus       323 AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~--~  397 (795)
T 3slk_A          323 AASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSR--T  397 (795)
T ss_dssp             HHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSS--S
T ss_pred             HHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecC--C
Confidence            99999999999999988899999999999997 9999999999999999 899997665 656655 9999999887  6


Q ss_pred             ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC---
Q 018627          250 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK---  325 (353)
Q Consensus       250 ~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---  325 (353)
                      .++.+.+++.+++ ++|+|||++|+ ..++.++++++++ |+++.+|.........+  ....+++++.++......   
T Consensus       398 ~~~~~~i~~~t~g~GvDvVld~~gg-~~~~~~l~~l~~~-Gr~v~iG~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~  473 (795)
T 3slk_A          398 CDFEQQFLGATGGRGVDVVLNSLAG-EFADASLRMLPRG-GRFLELGKTDVRDPVEV--ADAHPGVSYQAFDTVEAGPQR  473 (795)
T ss_dssp             STHHHHHHHHSCSSCCSEEEECCCT-TTTHHHHTSCTTC-EEEEECCSTTCCCHHHH--HHHSSSEEEEECCGGGGHHHH
T ss_pred             hhHHHHHHHHcCCCCeEEEEECCCc-HHHHHHHHHhcCC-CEEEEeccccccCcccc--cccCCCCEEEEeeccccCHHH
Confidence            7899999999988 99999999997 6789999999996 99999997654332222  222357777665432211   


Q ss_pred             CCCcHHHHHHHHHcCCCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~~~  345 (353)
                      ..+.+.++++++++|+|++.
T Consensus       474 ~~~~l~~~~~l~~~g~l~p~  493 (795)
T 3slk_A          474 IGEMLHELVELFEGRVLEPL  493 (795)
T ss_dssp             HHHHHHHHHHHHHTTSCCCC
T ss_pred             HHHHHHHHHHHHHcCCcCCC
Confidence            12568899999999998763

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=3e-38  Score=297.95  Aligned_cols=277  Identities=18%  Similarity=0.206  Sum_probs=223.7

Q ss_pred             ceeeEEEEec-----CCC-CeEEE--EeecCC-CCCCeEEEEEeeeecchhhhhhhccCC-------CCCcccccceeEE
Q 018627           11 ITCKAAVAWG-----AGQ-PLVVE--EVEVNP-PQPEEIRIKVVCTSLCRSDITAWETQA-------IFPRIFGHEASGI   74 (353)
Q Consensus        11 ~~~~a~~~~~-----~~~-~l~~~--~~~~p~-~~~~eVlVrv~~~~i~~~D~~~~~g~~-------~~p~~~G~e~~G~   74 (353)
                      .+||++++.+     ++. .++++  ++|.|. |++|||||||.++++|+.|. .+.|..       .+|+++|||++|+
T Consensus         3 ~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~   81 (345)
T 2j3h_A            3 ATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGY   81 (345)
T ss_dssp             EEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEE
T ss_pred             ccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecc
Confidence            4677777654     342 38888  889887 89999999999999998874 344432       3689999999999


Q ss_pred             EEE--eCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeE
Q 018627           75 VES--VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYT  152 (353)
Q Consensus        75 V~~--vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~  152 (353)
                      +++  +|+++++|++||||++.                                                   |+|+||+
T Consensus        82 ~~~GvV~~~v~~~~vGdrV~~~---------------------------------------------------g~~aey~  110 (345)
T 2j3h_A           82 GVSRIIESGHPDYKKGDLLWGI---------------------------------------------------VAWEEYS  110 (345)
T ss_dssp             EEEEEEEECSTTCCTTCEEEEE---------------------------------------------------EESBSEE
T ss_pred             eEEEEEecCCCCCCCCCEEEee---------------------------------------------------cCceeEE
Confidence            999  99999999999999875                                                   5899999


Q ss_pred             EEeCCc--eEECCC---CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          153 VVHSGC--AVKVSS---IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       153 ~~~~~~--v~~iP~---~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      +++++.  ++++|+   .++++ +|+++++++|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++
T Consensus       111 ~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~  188 (345)
T 2j3h_A          111 VITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAG  188 (345)
T ss_dssp             EECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred             EecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence            999876  999996   35555 67888899999999988889999999999997 9999999999999999 9999999


Q ss_pred             ChhhHHHHH-hCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC----C
Q 018627          227 NPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK----P  301 (353)
Q Consensus       227 ~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----~  301 (353)
                      ++++++.++ ++|++.++++.+ ..++.+.+++.+++++|++||++|. ..+..++++++++ |+++.+|.....    .
T Consensus       189 ~~~~~~~~~~~~g~~~~~d~~~-~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~  265 (345)
T 2j3h_A          189 SKEKVDLLKTKFGFDDAFNYKE-ESDLTAALKRCFPNGIDIYFENVGG-KMLDAVLVNMNMH-GRIAVCGMISQYNLENQ  265 (345)
T ss_dssp             SHHHHHHHHHTSCCSEEEETTS-CSCSHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGTTCSSC
T ss_pred             CHHHHHHHHHHcCCceEEecCC-HHHHHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhcC-CEEEEEccccccccCCc
Confidence            999999998 799998888763 2466777777665589999999997 6789999999997 999999975431    1


Q ss_pred             ceecchhh-hhcCcEEEeeecCCCCC--CCcHHHHHHHHHcCCCCC
Q 018627          302 EVAAHYGL-FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKVRNT  344 (353)
Q Consensus       302 ~~~~~~~~-~~~~~~i~g~~~~~~~~--~~~~~~~~~~l~~g~i~~  344 (353)
                      ...+.... +++++++.|++...+..  .+.+.++++++++|+|++
T Consensus       266 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~  311 (345)
T 2j3h_A          266 EGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITY  311 (345)
T ss_dssp             CCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCC
T ss_pred             cccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcC
Confidence            12222222 35699999876554311  123889999999999974

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=8.9e-29  Score=280.07  Aligned_cols=257  Identities=18%  Similarity=0.184  Sum_probs=207.9

Q ss_pred             eEEEEeecCC-CC--CCeEEEEEeeeecchhhhhhhccCCC----------CCcccccceeEEEEEeCCCCCCCCCCCeE
Q 018627           25 LVVEEVEVNP-PQ--PEEIRIKVVCTSLCRSDITAWETQAI----------FPRIFGHEASGIVESVGPGVTEFNEGEHV   91 (353)
Q Consensus        25 l~~~~~~~p~-~~--~~eVlVrv~~~~i~~~D~~~~~g~~~----------~p~~~G~e~~G~V~~vG~~~~~~~vGd~V   91 (353)
                      +.+.+.+.+. +.  ++||+|||.++|+|+.|++.+.|..+          .|.++|+|++|+|          ++||||
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEE
Confidence            7777666433 33  79999999999999999999888641          3568999999987          379999


Q ss_pred             EeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCChhhh
Q 018627           92 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI  171 (353)
Q Consensus        92 ~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~~~a  171 (353)
                      +++..                                                .|+|+||+++|++.++++|+++++++|
T Consensus      1614 ~g~~~------------------------------------------------~G~~Aeyv~vp~~~v~~iPd~ls~~eA 1645 (2512)
T 2vz8_A         1614 MGMVP------------------------------------------------AEGLATSVLLLQHATWEVPSTWTLEEA 1645 (2512)
T ss_dssp             EEECS------------------------------------------------SCCSBSEEECCGGGEEECCTTSCHHHH
T ss_pred             EEeec------------------------------------------------CCceeeEEEcccceEEEeCCCCCHHHH
Confidence            98721                                                158999999999999999999999999


Q ss_pred             hhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCC
Q 018627          172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPN  246 (353)
Q Consensus       172 a~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~  246 (353)
                      |.++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|++++++++|.+.+++    +|+++++++.
T Consensus      1646 A~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~ 1724 (2512)
T 2vz8_A         1646 ASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSR 1724 (2512)
T ss_dssp             TTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESS
T ss_pred             HHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCC
Confidence            9999999999999988889999999999987 9999999999999999 89999999999999986    7889999886


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                        +.++.+.+++.+++ ++|+|||++++ ..+..++++++++ |+++.+|.........+....+.+++++.++....+.
T Consensus      1725 --~~~~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 1800 (2512)
T 2vz8_A         1725 --DTSFEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLF 1800 (2512)
T ss_dssp             --SSHHHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTT
T ss_pred             --CHHHHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHHHh
Confidence              57888899888877 99999999974 7799999999996 9999999643211112223334679999887664432


Q ss_pred             --CCCcHHHHHHHHH----cCCCCC
Q 018627          326 --PKTDLPSLVNRYL----KKVRNT  344 (353)
Q Consensus       326 --~~~~~~~~~~~l~----~g~i~~  344 (353)
                        ..+++.++++++.    +|++++
T Consensus      1801 ~~~~~~~~~~l~~l~~~~~~g~l~p 1825 (2512)
T 2vz8_A         1801 EEGGATWQEVSELLKAGIQEGVVQP 1825 (2512)
T ss_dssp             SSCCHHHHHHHHHHHHHHTTTCSCC
T ss_pred             hhCHHHHHHHHHHHHHHHHcCCcCC
Confidence              1234555555543    555654

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.90  E-value=2.4e-23  Score=180.54  Aligned_cols=184  Identities=17%  Similarity=0.207  Sum_probs=140.5

Q ss_pred             CceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH
Q 018627          157 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK  235 (353)
Q Consensus       157 ~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~  235 (353)
                      +.++++|+++++++||.+++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            4688999999999999999999999999977789999999999996 9999999999999999 8999999999999999


Q ss_pred             hCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC--CCceecchhhhhc
Q 018627          236 AFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL--KPEVAAHYGLFLS  312 (353)
Q Consensus       236 ~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~--~~~~~~~~~~~~~  312 (353)
                      ++|++.++++.  +.++.+.+.+.+.+ ++|++||++|. ..+..+++.++++ |+++.+|....  ...+++  ..+.+
T Consensus        81 ~~g~~~~~d~~--~~~~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~--~~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSR--SVDFADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGL--AALAK  154 (198)
T ss_dssp             TTCCSEEEETT--CSTHHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEG--GGGTT
T ss_pred             HcCCCEEeeCC--cHHHHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC-CEEEEEcCCCCcCcCcCCh--hHhcC
Confidence            99998888776  45677777776655 89999999986 6789999999997 99999998652  122332  22356


Q ss_pred             CcEEEeeec------CCCCCCCcHHHHHHHHHcCCCCCCCC
Q 018627          313 GRTLKGSLF------GGWKPKTDLPSLVNRYLKKVRNTRKP  347 (353)
Q Consensus       313 ~~~i~g~~~------~~~~~~~~~~~~~~~l~~g~i~~~~l  347 (353)
                      ++++.++..      ......++++++++++++|++++.++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~  195 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPV  195 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCC
Confidence            888876533      11001357899999999999998764

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.20  E-value=6.8e-12  Score=111.57  Aligned_cols=168  Identities=18%  Similarity=0.150  Sum_probs=109.6

Q ss_pred             CCCCCeEEeec-------ccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC
Q 018627           85 FNEGEHVLTVF-------IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG  157 (353)
Q Consensus        85 ~~vGd~V~~~~-------~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~  157 (353)
                      +++||||++.+       ...|+.|.+|+.|..+.|.....       ..                  |+..+++     
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~-------~~------------------G~~~~~~-----   53 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK-------PE------------------GVKINGF-----   53 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC-------CT------------------TEEETTE-----
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC-------CC------------------CCEEEEE-----
Confidence            89999999988       67888899999888888865432       11                  1222233     


Q ss_pred             ceEECCCCCChhhhhhh-----chhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHH
Q 018627          158 CAVKVSSIAPLEKICLL-----SCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE  232 (353)
Q Consensus       158 ~v~~iP~~l~~~~aa~l-----~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~  232 (353)
                       +++.|+...+.+.+..     ..+...+ . +.+..++.++++||.+|+| .|..+..+++. +. +|++++.+++.++
T Consensus        54 -~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~  127 (248)
T 2yvl_A           54 -EVYRPTLEEIILLGFERKTQIIYPKDSF-Y-IALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYK  127 (248)
T ss_dssp             -EEECCCHHHHHHHTSCCSSCCCCHHHHH-H-HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHH
T ss_pred             -EEeCCCHHHHHHhcCcCCCCcccchhHH-H-HHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHH
Confidence             3333332212211111     1122222 2 3466788899999999988 58888888888 66 9999999999888


Q ss_pred             HHHh----CCC-ce--EeCCCCCCccHHHHHHHHhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEcC
Q 018627          233 KAKA----FGV-TE--FLNPNDNNEPVQQVIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       233 ~~~~----~G~-~~--~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+++    .+. ..  ++..+     +.+..  ..++++|+|+.+.+.+ ..+..+.+.++++ |+++....
T Consensus       128 ~a~~~~~~~~~~~~~~~~~~d-----~~~~~--~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          128 TAQKNLKKFNLGKNVKFFNVD-----FKDAE--VPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHHHHHTTCCTTEEEECSC-----TTTSC--CCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHHHHHcCCCCcEEEEEcC-----hhhcc--cCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            7765    343 11  22111     11100  0123799999988766 6788999999997 99998764

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.91  E-value=1.8e-11  Score=117.15  Aligned_cols=182  Identities=15%  Similarity=0.156  Sum_probs=129.3

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCc
Q 018627           66 IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAV  145 (353)
Q Consensus        66 ~~G~e~~G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~  145 (353)
                      ..|+++++.|..+|+++.++.+|++++.-....                       ++.                ..+..
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~-----------------------~~~----------------~~~~~  116 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKK-----------------------AYD----------------RAARL  116 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH-----------------------HHH----------------HHHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHH-----------------------HHH----------------HHHHc
Confidence            468899999999999999999999874311000                       000                00112


Q ss_pred             cceeeeEEEeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhc---cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEE
Q 018627          146 SSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVA---DISKGSTVVIFGLGTVGLSVAQGAKARGASRII  222 (353)
Q Consensus       146 g~~a~~~~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~---~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi  222 (353)
                      |++++|+..+...++++|+.++.++++.. .++.++|.++....   .-.+|++|+|+|+|.+|.++++.++..|+++|+
T Consensus       117 G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~  195 (404)
T 1gpj_A          117 GTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVL  195 (404)
T ss_dssp             TCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEE
T ss_pred             CCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEE
Confidence            46788887888888999998887776654 37788888763322   125899999999999999999999999988999


Q ss_pred             EEcCChhhH-HHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHH--HHHHH--h--ccCCceEEEEc
Q 018627          223 GVDTNPEKC-EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMIT--TALQS--C--CDGWGLAVTLG  295 (353)
Q Consensus       223 ~~~~~~~~~-~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~--~~~~~--l--~~~~G~~v~~g  295 (353)
                      +++++.++. ++++++|+. ++++    .++.+.+.     ++|+|++|++.+..+.  ..+..  +  +++ +.++.++
T Consensus       196 v~~r~~~ra~~la~~~g~~-~~~~----~~l~~~l~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~vd  264 (404)
T 1gpj_A          196 VANRTYERAVELARDLGGE-AVRF----DELVDHLA-----RSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILIID  264 (404)
T ss_dssp             EECSSHHHHHHHHHHHTCE-ECCG----GGHHHHHH-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEEEE
T ss_pred             EEeCCHHHHHHHHHHcCCc-eecH----HhHHHHhc-----CCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEEEE
Confidence            999999886 677888875 3332    23433332     5999999998654332  44554  3  555 7777777


Q ss_pred             CCC
Q 018627          296 VPK  298 (353)
Q Consensus       296 ~~~  298 (353)
                      ...
T Consensus       265 ia~  267 (404)
T 1gpj_A          265 IAN  267 (404)
T ss_dssp             CCS
T ss_pred             ccC
Confidence            654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.71  E-value=1.1e-08  Score=96.31  Aligned_cols=138  Identities=20%  Similarity=0.194  Sum_probs=94.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--EeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +++|+|+|+|++|++++++++.+|+ +|+++++++++++.++++++..  +++..  ..++.+.++     ++|+||+|+
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSN--SAEIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECC--HHHHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCC--HHHHHHHHc-----CCCEEEECC
Confidence            4899999999999999999999999 9999999999999998876544  23222  223333332     599999999


Q ss_pred             CChHH------HHHHHHHhccCCceEEEEcCCCCCC-----ceecchhhh-hcCcEEEeeecC-CCC--------CCCcH
Q 018627          272 GDTGM------ITTALQSCCDGWGLAVTLGVPKLKP-----EVAAHYGLF-LSGRTLKGSLFG-GWK--------PKTDL  330 (353)
Q Consensus       272 g~~~~------~~~~~~~l~~~~G~~v~~g~~~~~~-----~~~~~~~~~-~~~~~i~g~~~~-~~~--------~~~~~  330 (353)
                      +.+..      ....++.++++ |++++++...+..     ...++...+ .+++++.+...- ...        .+..+
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~  317 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTL  317 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHH
Confidence            86542      56678889997 9999999765311     111222122 357777664311 100        12345


Q ss_pred             HHHHHHHHcC
Q 018627          331 PSLVNRYLKK  340 (353)
Q Consensus       331 ~~~~~~l~~g  340 (353)
                      +.+++++.+|
T Consensus       318 ~~l~~l~~~G  327 (361)
T 1pjc_A          318 PYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHG
T ss_pred             HHHHHHHhCC
Confidence            6788888877

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.54  E-value=1.8e-07  Score=88.80  Aligned_cols=145  Identities=17%  Similarity=0.228  Sum_probs=94.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCC-------------Ccc----HHH
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDN-------------NEP----VQQ  254 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~-------------~~~----~~~  254 (353)
                      ++++|+|+|+|.+|++++++++.+|+ +|+++++++++++.++++|+..+ ++..+.             ..+    ..+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 79999999999999988998754 222100             000    112


Q ss_pred             HHHHHhcCCccEEEecc---CCh--HH-HHHHHHHhccCCceEEEEcCCCC-CCceecchhhh-hcCcEEEeeecCCCCC
Q 018627          255 VIKRITDGGADYSFECI---GDT--GM-ITTALQSCCDGWGLAVTLGVPKL-KPEVAAHYGLF-LSGRTLKGSLFGGWKP  326 (353)
Q Consensus       255 ~~~~~~~~~~dvv~d~~---g~~--~~-~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~-~~~~~i~g~~~~~~~~  326 (353)
                      .+.+... ++|+|++|+   |.+  .. ....++.|+++ +.++.++...+ ..........+ .+++++.+....   +
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~---p  324 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV---P  324 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG---G
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC---c
Confidence            2333332 699999999   532  22 36788899997 99999996432 11111111112 358888776432   1


Q ss_pred             CCcHHHHHHHHHcCCCC
Q 018627          327 KTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       327 ~~~~~~~~~~l~~g~i~  343 (353)
                      .+...++++++.++.++
T Consensus       325 ~~~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          325 SRVAADASPLFAKNLLN  341 (384)
T ss_dssp             GGGHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHhHHH
Confidence            22234577777766543

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.54  E-value=1.3e-07  Score=89.28  Aligned_cols=141  Identities=20%  Similarity=0.218  Sum_probs=88.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      ++++|+|+|+|.+|+.+++.++.+|+ +|+++++++++++.+++ +|+....+..+ ..++.+.++     ++|++++|+
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~~~-----~~DvVi~~~  237 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT-EANIKKSVQ-----HADLLIGAV  237 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC-HHHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC-HHHHHHHHh-----CCCEEEECC
Confidence            46999999999999999999999999 99999999999888766 77653232221 223333333     599999999


Q ss_pred             CChHH------HHHHHHHhccCCceEEEEcCCCCCC-----ceecchhhh-hcCcEEEeeecCC--------C-CCCCcH
Q 018627          272 GDTGM------ITTALQSCCDGWGLAVTLGVPKLKP-----EVAAHYGLF-LSGRTLKGSLFGG--------W-KPKTDL  330 (353)
Q Consensus       272 g~~~~------~~~~~~~l~~~~G~~v~~g~~~~~~-----~~~~~~~~~-~~~~~i~g~~~~~--------~-~~~~~~  330 (353)
                      +.+..      ....++.++++ |+++.++...+..     ..+++...+ .+++.+.+...-.        + .....+
T Consensus       238 g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~  316 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTL  316 (369)
T ss_dssp             C-------CCSCHHHHTTSCTT-CEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHH
T ss_pred             CCCccccchhHHHHHHHhhcCC-CEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHH
Confidence            86431      56778899997 9999998764311     111111112 3477766543110        0 012346


Q ss_pred             HHHHHHHHcCC
Q 018627          331 PSLVNRYLKKV  341 (353)
Q Consensus       331 ~~~~~~l~~g~  341 (353)
                      +.+++++.+|.
T Consensus       317 ~~l~~l~~~g~  327 (369)
T 2eez_A          317 PYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHhcCh
Confidence            67777777763

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.51  E-value=3.9e-07  Score=86.84  Aligned_cols=125  Identities=18%  Similarity=0.197  Sum_probs=84.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCC---C--------CccH----HHHH
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPND---N--------NEPV----QQVI  256 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~---~--------~~~~----~~~~  256 (353)
                      ++++|+|+|+|.+|+.++++++.+|+ +|++++++.++++.++++|+..+. +..+   .        ..++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58999999999999999999999999 999999999999999999987542 1100   0        0111    0123


Q ss_pred             HHHhcCCccEEEeccCCh-----HH-HHHHHHHhccCCceEEEEcCCC-CCCceecch--hhhhcCcEEEeee
Q 018627          257 KRITDGGADYSFECIGDT-----GM-ITTALQSCCDGWGLAVTLGVPK-LKPEVAAHY--GLFLSGRTLKGSL  320 (353)
Q Consensus       257 ~~~~~~~~dvv~d~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~--~~~~~~~~i~g~~  320 (353)
                      .+... ++|+|+++++.+     .. ....++.|+++ +.++.++... +..+.....  ....+++++.|..
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~  320 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYT  320 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCS
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeC
Confidence            23222 589999995322     22 36788999997 9999999642 222222111  1224588888764

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.48  E-value=4.1e-07  Score=86.03  Aligned_cols=98  Identities=21%  Similarity=0.279  Sum_probs=76.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +|++|+|+|+|.+|+++++.++.+|+ +|+++++++++++.+++ +|+....+... ..++.+.++     ++|+|++|+
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~-~~~l~~~l~-----~aDvVi~~~  239 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS-AYELEGAVK-----RADLVIGAV  239 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC-HHHHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC-HHHHHHHHc-----CCCEEEECC
Confidence            58999999999999999999999999 99999999999888876 77653222211 223333332     489999999


Q ss_pred             CChHH------HHHHHHHhccCCceEEEEcCCC
Q 018627          272 GDTGM------ITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       272 g~~~~------~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +.+..      ....++.++++ |.++.++...
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~  271 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQ  271 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGT
T ss_pred             CcCCCCCcceecHHHHhcCCCC-cEEEEEecCC
Confidence            76543      56788899997 9999999643

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.46  E-value=6.4e-07  Score=87.08  Aligned_cols=106  Identities=24%  Similarity=0.357  Sum_probs=83.8

Q ss_pred             hhHHHHHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHH
Q 018627          178 LSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI  256 (353)
Q Consensus       178 ~~ta~~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~  256 (353)
                      ..+.++++.+..+ ..+|++|+|+|.|.+|..+++.++.+|+ +|+++++++++++.++++|++ +++       +.+.+
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~~-------l~e~l  327 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VVT-------VEEAI  327 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHHHG
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Eec-------HHHHH
Confidence            3455666533222 6789999999999999999999999999 999999999999888899985 321       22222


Q ss_pred             HHHhcCCccEEEeccCChHHHH-HHHHHhccCCceEEEEcCCC
Q 018627          257 KRITDGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       257 ~~~~~~~~dvv~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~  298 (353)
                           .+.|+|+++++....+. ..++.++++ |+++.+|...
T Consensus       328 -----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~  364 (494)
T 3ce6_A          328 -----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD  364 (494)
T ss_dssp             -----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG
T ss_pred             -----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC
Confidence                 25899999999766565 788999997 9999999754

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.23  E-value=2.8e-06  Score=76.57  Aligned_cols=191  Identities=17%  Similarity=0.170  Sum_probs=107.8

Q ss_pred             eCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC
Q 018627           78 VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG  157 (353)
Q Consensus        78 vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~  157 (353)
                      +|+....+++||+|+.+....+..+..++.|....+.........+           .|         ..|.+.+.++..
T Consensus        13 ~~~~~~~~~~gd~v~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i-----------~g---------~~~g~~~~~~~~   72 (277)
T 1o54_A           13 VGKVADTLKPGDRVLLSFEDESEFLVDLEKDKKLHTHLGIIDLNEV-----------FE---------KGPGEIIRTSAG   72 (277)
T ss_dssp             CCCGGGCCCTTCEEEEEETTSCEEEEECCTTCEEEETTEEEEHHHH-----------TT---------SCTTCEEECTTC
T ss_pred             cccccCCCCCCCEEEEEECCCcEEEEEEcCCCEEecCCceEEHHHh-----------cC---------CCCCcEEEEcCC
Confidence            5565567999999999855555555555555433333222211100           01         022233444333


Q ss_pred             --ceEECCCCCChhhhhhhc--hhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHH
Q 018627          158 --CAVKVSSIAPLEKICLLS--CGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCE  232 (353)
Q Consensus       158 --~v~~iP~~l~~~~aa~l~--~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~  232 (353)
                        ....-|+...+.++..-.  ..+......+....++.++++||..|+|. |..+..+++..+ ..+|++++.+++.++
T Consensus        73 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~  151 (277)
T 1o54_A           73 KKGYILIPSLIDEIMNMKRRTQIVYPKDSSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAK  151 (277)
T ss_dssp             CEEEEECCCHHHHHHTCCC-CCCCCHHHHHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHH
T ss_pred             cEEEEeCCCHHHHHhhccccCCccCHHHHHHHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHH
Confidence              233334322111110000  00111112234567889999999999875 888888888853 349999999999888


Q ss_pred             HHHh----CCC-ceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEcC
Q 018627          233 KAKA----FGV-TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       233 ~~~~----~G~-~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+++    .|. ..+....   .++.+.   +..+.||+|+.....+ ..+..+.+.|+++ |+++....
T Consensus       152 ~a~~~~~~~~~~~~v~~~~---~d~~~~---~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          152 LAESNLTKWGLIERVTIKV---RDISEG---FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             HHHHHHHHTTCGGGEEEEC---CCGGGC---CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             HHHHHHHHcCCCCCEEEEE---CCHHHc---ccCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            7754    354 2221111   111111   1224799999877655 6788889999997 99988754

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.18  E-value=1.3e-06  Score=70.80  Aligned_cols=107  Identities=16%  Similarity=0.185  Sum_probs=76.3

Q ss_pred             hhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHH-HHhCCCceEeCCCCCCccHHHH
Q 018627          177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTEFLNPNDNNEPVQQV  255 (353)
Q Consensus       177 ~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~  255 (353)
                      ++++++.++ +.+....+++|+|+|+|.+|.++++.++..|+ +|+++++++++.+. ++++|.... .+    .++.+.
T Consensus         5 ~~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~~-~~----~~~~~~   77 (144)
T 3oj0_A            5 KVSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEYV-LI----NDIDSL   77 (144)
T ss_dssp             CCSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEEE-EC----SCHHHH
T ss_pred             cccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCceE-ee----cCHHHH
Confidence            455677776 33444459999999999999999999988999 59999999988765 466774322 22    234444


Q ss_pred             HHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          256 IKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       256 ~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +.     .+|+|+.|++.+..+.. ...++++ +.++.++.+
T Consensus        78 ~~-----~~Divi~at~~~~~~~~-~~~l~~g-~~vid~~~p  112 (144)
T 3oj0_A           78 IK-----NNDVIITATSSKTPIVE-ERSLMPG-KLFIDLGNP  112 (144)
T ss_dssp             HH-----TCSEEEECSCCSSCSBC-GGGCCTT-CEEEECCSS
T ss_pred             hc-----CCCEEEEeCCCCCcEee-HHHcCCC-CEEEEccCC
Confidence            33     48999999987533222 2567886 899999864

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.11  E-value=4.3e-06  Score=74.79  Aligned_cols=95  Identities=17%  Similarity=0.125  Sum_probs=69.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCc-eEeCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .++.+||.+|+|. |..+..+++.. +. +|++++.+++.++.+++.+.. .++..+  ..++     ...++.||+|+.
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d--~~~~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVAS--SHRL-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECC--TTSC-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcc--hhhC-----CCCCCceeEEEE
Confidence            6789999999986 88888888886 66 999999999999998775532 222221  1111     012347999996


Q ss_pred             ccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          270 CIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       270 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      . .....+....+.|+++ |+++.+...
T Consensus       155 ~-~~~~~l~~~~~~L~pg-G~l~~~~~~  180 (269)
T 1p91_A          155 I-YAPCKAEELARVVKPG-GWVITATPG  180 (269)
T ss_dssp             E-SCCCCHHHHHHHEEEE-EEEEEEEEC
T ss_pred             e-CChhhHHHHHHhcCCC-cEEEEEEcC
Confidence            4 4456789999999997 999887543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.07  E-value=2.4e-05  Score=74.23  Aligned_cols=103  Identities=22%  Similarity=0.373  Sum_probs=78.4

Q ss_pred             HHHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh
Q 018627          182 LGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       182 ~~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      +.++.+..+ .-.|++|+|.|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. +.       ++.+.+.   
T Consensus       207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~-v~-------~Leeal~---  274 (435)
T 3gvp_A          207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFR-LV-------KLNEVIR---  274 (435)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHHHTT---
T ss_pred             HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCE-ec-------cHHHHHh---
Confidence            344444433 4589999999999999999999999999 899999998877777777753 11       2322222   


Q ss_pred             cCCccEEEeccCChHHHH-HHHHHhccCCceEEEEcCCCC
Q 018627          261 DGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~~~  299 (353)
                        ..|+++.|.|....+. ..+..|+++ +.++.+|....
T Consensus       275 --~ADIVi~atgt~~lI~~e~l~~MK~g-ailINvgrg~~  311 (435)
T 3gvp_A          275 --QVDIVITCTGNKNVVTREHLDRMKNS-CIVCNMGHSNT  311 (435)
T ss_dssp             --TCSEEEECSSCSCSBCHHHHHHSCTT-EEEEECSSTTT
T ss_pred             --cCCEEEECCCCcccCCHHHHHhcCCC-cEEEEecCCCc
Confidence              5899999988655554 788999997 99999987644

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.02  E-value=3.6e-05  Score=59.30  Aligned_cols=95  Identities=15%  Similarity=0.128  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .+++|+|+|+|.+|..+++.+...|..+|+++++++++.+.++..+...+. +..  +   .+.+.+.. .++|+||+++
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~---~~~~~~~~-~~~d~vi~~~   77 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAK--D---EAGLAKAL-GGFDAVISAA   77 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTT--C---HHHHHHHT-TTCSEEEECS
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCC--C---HHHHHHHH-cCCCEEEECC
Confidence            357899999999999999999999933899999999999888876765432 222  1   12333332 2699999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEE
Q 018627          272 GDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      +..........+...+ .+++.+
T Consensus        78 ~~~~~~~~~~~~~~~g-~~~~~~   99 (118)
T 3ic5_A           78 PFFLTPIIAKAAKAAG-AHYFDL   99 (118)
T ss_dssp             CGGGHHHHHHHHHHTT-CEEECC
T ss_pred             CchhhHHHHHHHHHhC-CCEEEe
Confidence            8644333333444443 455544

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.01  E-value=1.4e-05  Score=75.54  Aligned_cols=102  Identities=19%  Similarity=0.252  Sum_probs=73.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC-------------CCC-CCccH----HH
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN-------------PND-NNEPV----QQ  254 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~-------------~~~-~~~~~----~~  254 (353)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++.+++.++++.++++|+..+..             +.. -.+.+    .+
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            57899999999999999999999999 9999999999999999999864321             000 00000    11


Q ss_pred             HHHHHhcCCccEEEeccCChH------HHHHHHHHhccCCceEEEEcCC
Q 018627          255 VIKRITDGGADYSFECIGDTG------MITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       255 ~~~~~~~~~~dvv~d~~g~~~------~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .+.+.. ...|+||.|+..+.      ..+..++.|+++ ..+|.+...
T Consensus       268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d  314 (405)
T 4dio_A          268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVE  314 (405)
T ss_dssp             HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGG
T ss_pred             HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCC
Confidence            222221 16999999964321      346788999997 999999863

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.99  E-value=9.6e-06  Score=76.03  Aligned_cols=104  Identities=22%  Similarity=0.277  Sum_probs=75.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC-C-CCCcc---------H---HHHHHH
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP-N-DNNEP---------V---QQVIKR  258 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~-~-~~~~~---------~---~~~~~~  258 (353)
                      ++.+|+|+|+|.+|+.++++++.+|+ +|++.+++.++++.++++|+..+... . .....         .   .+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 89999999999999999998643210 0 00000         0   112222


Q ss_pred             HhcCCccEEEeccCChH------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          259 ITDGGADYSFECIGDTG------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       259 ~~~~~~dvv~d~~g~~~------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      .. ..+|+||.++..+.      ..+..++.++++ +.+|.++...+
T Consensus       262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~G  306 (381)
T 3p2y_A          262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETG  306 (381)
T ss_dssp             HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGT
T ss_pred             HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCC
Confidence            21 36999999863321      247888999997 99999986544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.93  E-value=3.3e-05  Score=63.18  Aligned_cols=92  Identities=21%  Similarity=0.224  Sum_probs=65.0

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      ...++++|+|+|+|.+|..+++.++..|. +|+++++++++.+.++ +.|...+. ..  ..+ .+.+.+..-.++|+||
T Consensus        15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d--~~~-~~~l~~~~~~~ad~Vi   89 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GD--AAE-FETLKECGMEKADMVF   89 (155)
T ss_dssp             --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SC--TTS-HHHHHTTTGGGCSEEE
T ss_pred             cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ec--CCC-HHHHHHcCcccCCEEE
Confidence            34678999999999999999999999999 9999999999988777 67765432 11  111 2233332123799999


Q ss_pred             eccCChHHHHHHHHHhcc
Q 018627          269 ECIGDTGMITTALQSCCD  286 (353)
Q Consensus       269 d~~g~~~~~~~~~~~l~~  286 (353)
                      .+++...........++.
T Consensus        90 ~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           90 AFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             ECSSCHHHHHHHHHHHHH
T ss_pred             EEeCCcHHHHHHHHHHHH
Confidence            999986655555555554

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.92  E-value=3.4e-05  Score=69.94  Aligned_cols=102  Identities=14%  Similarity=0.095  Sum_probs=74.1

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ..++++++++||.+|+|+.+..++.+++..|+ +|++++.+++.++.+++    .|.+.+-...   .+..    ++.++
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~---gDa~----~l~d~  187 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVIT---GDET----VIDGL  187 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEE---SCGG----GGGGC
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEE---Cchh----hCCCC
Confidence            35688999999999998777777778887898 99999999999888765    3543221111   1111    12245


Q ss_pred             CccEEEeccCCh---HHHHHHHHHhccCCceEEEEcCC
Q 018627          263 GADYSFECIGDT---GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       263 ~~dvv~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .||+||.....+   ..++...+.|+|+ |+++.....
T Consensus       188 ~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~~  224 (298)
T 3fpf_A          188 EFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTYT  224 (298)
T ss_dssp             CCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEECC
T ss_pred             CcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcCc
Confidence            899999765543   5688888999997 999977643

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.86  E-value=1.4e-05  Score=74.13  Aligned_cols=104  Identities=20%  Similarity=0.204  Sum_probs=66.9

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhC----C-------------CceEeCCCC
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAF----G-------------VTEFLNPND  247 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~----G-------------~~~~~~~~~  247 (353)
                      .+...+.+|++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++.    |             ...++..+ 
T Consensus        98 l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d-  175 (336)
T 2b25_A           98 LSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD-  175 (336)
T ss_dssp             HHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC-
T ss_pred             HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC-
Confidence            3556789999999999875 7777788887653 4999999999888877552    1             11122111 


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEcC
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                       ..+.   ...+..+.||+|+-....+ ..+..+.+.|+++ |+++.+..
T Consensus       176 -~~~~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          176 -ISGA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             -TTCC---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             -hHHc---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence             1111   0111223699888765543 3478888999997 99997754

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.83  E-value=8.1e-05  Score=67.67  Aligned_cols=96  Identities=21%  Similarity=0.286  Sum_probs=73.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -.|++|+|+|.|.+|..+++.++..|+ +|++.+++.++.+.++++|+..+ +.    .++.+.+     ...|+|+.++
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-~~----~~l~~~l-----~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPF-HI----SKAAQEL-----RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEE-EG----GGHHHHT-----TTCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-Ch----hhHHHHh-----cCCCEEEECC
Confidence            468999999999999999999999999 99999999988777778886532 11    2232222     2599999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +....-...+..++++ +.++.++..+.
T Consensus       222 p~~~i~~~~l~~mk~~-~~lin~ar~~~  248 (293)
T 3d4o_A          222 PALVVTANVLAEMPSH-TFVIDLASKPG  248 (293)
T ss_dssp             SSCCBCHHHHHHSCTT-CEEEECSSTTC
T ss_pred             ChHHhCHHHHHhcCCC-CEEEEecCCCC
Confidence            7533334667889997 99999986443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.81  E-value=0.00016  Score=64.01  Aligned_cols=104  Identities=9%  Similarity=0.092  Sum_probs=68.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-e--CCCCCCccHHHHHHHHh--cCCccEE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      +++|||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+.+.... +  |..+ ..+..+.+.+..  -+++|++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVAD-PLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            378999987 8999999999999999 99999999998887766554332 2  2221 233333333222  2489999


Q ss_pred             EeccCCh-------------------------HHHHHHHHHhccCCceEEEEcCCCC
Q 018627          268 FECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       268 ~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      ++++|..                         ...+.++..|.+++|++|.+++...
T Consensus        80 VNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~  136 (247)
T 3ged_A           80 VNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA  136 (247)
T ss_dssp             EECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG
T ss_pred             EECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            9998742                         1122333344433499999987443

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.81  E-value=8.5e-05  Score=65.68  Aligned_cols=104  Identities=18%  Similarity=0.193  Sum_probs=72.7

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCce-EeCCCCCCccHHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~-~~~~~~~~~~~~~~~~~  258 (353)
                      +....++.++++||..|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|... +....   .++.+.   
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~---  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL---KDIYEG---  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC---SCGGGC---
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE---Cchhhc---
Confidence            34567889999999999874 888888888853 3499999999998887755    35432 21111   111111   


Q ss_pred             HhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEcC
Q 018627          259 ITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       259 ~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ...+.+|+|+.....+ ..+..+.+.|+++ |+++.+..
T Consensus       158 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  195 (255)
T 3mb5_A          158 IEEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYTP  195 (255)
T ss_dssp             CCCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             cCCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEEC
Confidence            1223799999877764 3788999999997 99998754

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.75  E-value=8e-05  Score=66.97  Aligned_cols=105  Identities=21%  Similarity=0.256  Sum_probs=72.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE---eCCCCCCccHHHHHHHHh--cCCc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      -.|+.+||+|+ +++|.+.++.+...|+ +|+++++++++++.+ +++|....   .|.. +..+..+.+.+..  -+++
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~-~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSA-NLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTT-CHHHHHHHHHHHHHHHSCE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCC-CHHHHHHHHHHHHHHcCCC
Confidence            47899999987 8999999999999999 999999999887755 55664432   2322 1233333333322  2479


Q ss_pred             cEEEeccCCh-------------------------HHHHHHHHHhccCCceEEEEcCCCC
Q 018627          265 DYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       265 dvv~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      |++++++|..                         ...+.++..|+++ |++|.+++...
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~~~  163 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGSTAG  163 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCGGG
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeehhh
Confidence            9999999852                         1233444567785 99999986433

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.74  E-value=0.00013  Score=69.43  Aligned_cols=94  Identities=21%  Similarity=0.289  Sum_probs=73.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+. ++       ++.+.++     ..|+|+.+
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~-vv-------~LeElL~-----~ADIVv~a  309 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFE-VV-------TLDDAAS-----TADIVVTT  309 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE-EC-------CHHHHGG-----GCSEEEEC
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCce-ec-------cHHHHHh-----hCCEEEEC
Confidence            4589999999999999999999999999 999999888776666666753 22       2333332     48999999


Q ss_pred             cCChHHH-HHHHHHhccCCceEEEEcCCCC
Q 018627          271 IGDTGMI-TTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       271 ~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      .+....+ ...+..|+++ +.++.+|....
T Consensus       310 tgt~~lI~~e~l~~MK~G-AILINvGRgdv  338 (464)
T 3n58_A          310 TGNKDVITIDHMRKMKDM-CIVGNIGHFDN  338 (464)
T ss_dssp             CSSSSSBCHHHHHHSCTT-EEEEECSSSTT
T ss_pred             CCCccccCHHHHhcCCCC-eEEEEcCCCCc
Confidence            8865444 6788999997 99999987543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.68  E-value=0.00014  Score=66.36  Aligned_cols=96  Identities=20%  Similarity=0.290  Sum_probs=72.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -.|++|+|+|.|.+|..+++.++..|+ +|++.+++.++.+.++++|+.. +..    .++.+.+     ...|+|+.++
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~----~~l~~~l-----~~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVP-FHT----DELKEHV-----KDIDICINTI  223 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEG----GGHHHHS-----TTCSEEEECC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Ech----hhHHHHh-----hCCCEEEECC
Confidence            468999999999999999999999999 9999999998887777777642 211    2232222     2689999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +....-...+..++++ +.++.++..+.
T Consensus       224 p~~~i~~~~~~~mk~g-~~lin~a~g~~  250 (300)
T 2rir_A          224 PSMILNQTVLSSMTPK-TLILDLASRPG  250 (300)
T ss_dssp             SSCCBCHHHHTTSCTT-CEEEECSSTTC
T ss_pred             ChhhhCHHHHHhCCCC-CEEEEEeCCCC
Confidence            8633234566788997 99999987543

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.65  E-value=0.00011  Score=64.85  Aligned_cols=105  Identities=13%  Similarity=0.097  Sum_probs=68.1

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      +-.|+++||+|+ +++|.+.++.+...|+ +|+++++++++++..+.-.+.. ..|..  +.+-.+.+-+.. +++|+++
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~v~~~~~~~-g~iDiLV   83 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDIT--DSQRLQRLFEAL-PRLDVLV   83 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTT--CHHHHHHHHHHC-SCCSEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCC--CHHHHHHHHHhc-CCCCEEE
Confidence            347999999987 8999999999999999 9999999988765432211111 12332  222223332322 4899999


Q ss_pred             eccCCh-----------------------HHHHHHHHHhccCCceEEEEcCCCC
Q 018627          269 ECIGDT-----------------------GMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       269 d~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +++|..                       ...+.++..|+.++|++|.+++...
T Consensus        84 NNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~  137 (242)
T 4b79_A           84 NNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYS  137 (242)
T ss_dssp             ECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGG
T ss_pred             ECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccc
Confidence            999842                       1123344455433499999987443

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.64  E-value=0.00027  Score=63.35  Aligned_cols=103  Identities=18%  Similarity=0.266  Sum_probs=71.9

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhC-----C--Cce--EeCCCCCCccHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF-----G--VTE--FLNPNDNNEPVQQ  254 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~-----G--~~~--~~~~~~~~~~~~~  254 (353)
                      +....++.++++||.+|+| .|..+..+++..+ ..+|++++.+++..+.+++.     |  ...  ++..     ++.+
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~-----d~~~  164 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS-----DLAD  164 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS-----CGGG
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC-----chHh
Confidence            3456678999999999987 6888888888753 23999999999988877552     4  222  2221     1111


Q ss_pred             HHHHHhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEcC
Q 018627          255 VIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       255 ~~~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .  ....+.+|+|+.....+ ..+..+.+.|+++ |+++.+..
T Consensus       165 ~--~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          165 S--ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             C--CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             c--CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            0  01134799999877654 6788888999997 99988754

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.63  E-value=0.00057  Score=60.73  Aligned_cols=106  Identities=18%  Similarity=0.211  Sum_probs=70.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCC--CCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPND--NNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~--~~~~~~~~~~~~~--~~~  263 (353)
                      .|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++++..    ++.|.......-+  ++.+..+.+.+..  -++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            6899999987 8999999999999999 999999998876543    4456544322111  1233333333332  248


Q ss_pred             ccEEEeccCCh-------------------------HHHHHHHHHh--ccCCceEEEEcCCCC
Q 018627          264 ADYSFECIGDT-------------------------GMITTALQSC--CDGWGLAVTLGVPKL  299 (353)
Q Consensus       264 ~dvv~d~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~g~~~~  299 (353)
                      +|++++++|..                         ...+.++..|  +.++|++|.+++...
T Consensus        87 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~  149 (255)
T 4g81_D           87 VDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS  149 (255)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh
Confidence            99999999852                         1223344445  222499999987544

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.63  E-value=0.00012  Score=64.56  Aligned_cols=106  Identities=14%  Similarity=0.096  Sum_probs=73.3

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhC-----CCceEeCCCCCCccHHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF-----GVTEFLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~-----G~~~~~~~~~~~~~~~~~~~~  258 (353)
                      +.+..++.++++||..|+|. |..+..+++..+ ..+|++++.+++..+.+++.     |...+....   .++.+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~---~d~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHL---GKLEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE---SCGGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE---Cchhhc--C
Confidence            34566789999999999874 888888888853 23999999999988887653     533221111   111110  0


Q ss_pred             HhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEcCC
Q 018627          259 ITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       259 ~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +..+.+|+|+.....+ ..+..+.+.|+++ |+++.+...
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  200 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLPN  200 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEESC
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeCC
Confidence            1224799999877655 6788889999997 999987643

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.60  E-value=0.00056  Score=57.27  Aligned_cols=96  Identities=19%  Similarity=0.306  Sum_probs=67.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHH-hcCCccEEEe
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRI-TDGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~-~~~~~dvv~d  269 (353)
                      .+++|+|.|+|.+|..+++.++.. |. .|+++++++++.+.+++.|+..+. +..  +   .+.+.+. .-.++|+++.
T Consensus        38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~--~---~~~l~~~~~~~~ad~vi~  111 (183)
T 3c85_A           38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDAT--D---PDFWERILDTGHVKLVLL  111 (183)
T ss_dssp             TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTT--C---HHHHHTBCSCCCCCEEEE
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCC--C---HHHHHhccCCCCCCEEEE
Confidence            367899999999999999999998 98 899999999999999888876543 222  1   1233333 1237999999


Q ss_pred             ccCChHHHHHHHHHhccC--CceEEEE
Q 018627          270 CIGDTGMITTALQSCCDG--WGLAVTL  294 (353)
Q Consensus       270 ~~g~~~~~~~~~~~l~~~--~G~~v~~  294 (353)
                      +++...........++..  ..+++..
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          112 AMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             CCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             eCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            998755444444444432  1455554

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.58  E-value=0.00022  Score=68.84  Aligned_cols=98  Identities=22%  Similarity=0.328  Sum_probs=74.9

Q ss_pred             HHHhccC-CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCC
Q 018627          185 AWNVADI-SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       185 l~~~~~~-~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      +.+..+. -.|++++|+|+|++|.++++.++..|+ +|+++++++.+.+.+...|++ +.+..    +        ....
T Consensus       255 i~r~tg~~L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~le----e--------~~~~  320 (488)
T 3ond_A          255 LMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLE----D--------VVSE  320 (488)
T ss_dssp             HHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGG----G--------TTTT
T ss_pred             HHHHcCCcccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHH----H--------HHHh
Confidence            3343343 479999999999999999999999999 999999999888877777753 22111    0        1126


Q ss_pred             ccEEEeccCChHHH-HHHHHHhccCCceEEEEcCC
Q 018627          264 ADYSFECIGDTGMI-TTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       264 ~dvv~d~~g~~~~~-~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +|+++++.|....+ ...+..++++ +.++.+|..
T Consensus       321 aDvVi~atG~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          321 ADIFVTTTGNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             CSEEEECSSCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             cCEEEeCCCChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            89999999875555 4478889997 999999875

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.58  E-value=0.00067  Score=60.25  Aligned_cols=78  Identities=14%  Similarity=0.287  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      +|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|....   .|.. +..+..+.+.+..  -+
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-KKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-SHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHHHHcC
Confidence            6899999987 8999999999999999 999999999876644    44565443   2322 1233333333322  24


Q ss_pred             CccEEEeccC
Q 018627          263 GADYSFECIG  272 (353)
Q Consensus       263 ~~dvv~d~~g  272 (353)
                      ++|++++++|
T Consensus        84 ~iDiLVNNAG   93 (254)
T 4fn4_A           84 RIDVLCNNAG   93 (254)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            8999999987

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.52  E-value=0.0011  Score=52.89  Aligned_cols=95  Identities=13%  Similarity=0.162  Sum_probs=66.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      .++|+|.|.|.+|..+++.++..|. .|+++++++++.+.+++.|...+.--. .+   .+.+++..-..+|+++-+++.
T Consensus         7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~gd~-~~---~~~l~~a~i~~ad~vi~~~~~   81 (140)
T 3fwz_A            7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVLGNA-AN---EEIMQLAHLECAKWLILTIPN   81 (140)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEESCT-TS---HHHHHHTTGGGCSEEEECCSC
T ss_pred             CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEECCC-CC---HHHHHhcCcccCCEEEEECCC
Confidence            4679999999999999999999999 999999999999999988876543211 12   223333222379999999987


Q ss_pred             hHHH---HHHHHHhccCCceEEEE
Q 018627          274 TGMI---TTALQSCCDGWGLAVTL  294 (353)
Q Consensus       274 ~~~~---~~~~~~l~~~~G~~v~~  294 (353)
                      ...-   -...+.+.+. .+++.-
T Consensus        82 ~~~n~~~~~~a~~~~~~-~~iiar  104 (140)
T 3fwz_A           82 GYEAGEIVASARAKNPD-IEIIAR  104 (140)
T ss_dssp             HHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             hHHHHHHHHHHHHHCCC-CeEEEE
Confidence            4422   2333455564 665544

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.47  E-value=0.00029  Score=66.93  Aligned_cols=92  Identities=23%  Similarity=0.350  Sum_probs=71.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+..        .++.+.++     ..|+++.+
T Consensus       208 ~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~--------~sL~eal~-----~ADVVilt  273 (436)
T 3h9u_A          208 MIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQV--------LLVEDVVE-----EAHIFVTT  273 (436)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE--------CCHHHHTT-----TCSEEEEC
T ss_pred             cccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCee--------cCHHHHHh-----hCCEEEEC
Confidence            3469999999999999999999999999 9999999988877777777532        12333332     48999988


Q ss_pred             cCChHHHH-HHHHHhccCCceEEEEcCC
Q 018627          271 IGDTGMIT-TALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       271 ~g~~~~~~-~~~~~l~~~~G~~v~~g~~  297 (353)
                      .+....+. ..+..|+++ ..++.+|..
T Consensus       274 ~gt~~iI~~e~l~~MK~g-AIVINvgRg  300 (436)
T 3h9u_A          274 TGNDDIITSEHFPRMRDD-AIVCNIGHF  300 (436)
T ss_dssp             SSCSCSBCTTTGGGCCTT-EEEEECSSS
T ss_pred             CCCcCccCHHHHhhcCCC-cEEEEeCCC
Confidence            87644443 667889997 999999843

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.40  E-value=0.00046  Score=61.13  Aligned_cols=104  Identities=16%  Similarity=0.188  Sum_probs=67.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+ ++... .+  |..+ ..++.+.+.+..  -+++|
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIAD-LNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence            6789999987 8999999999999999 99999999988776543 44322 22  2221 222322222221  24799


Q ss_pred             EEEeccCCh----------H---------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          266 YSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       266 vv~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      ++++++|..          +               ..+.++..++++ |++|.+++...
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~~  142 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSVAD  142 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCGGG
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECChhh
Confidence            999998742          1               112223345565 99999987443

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.40  E-value=0.0013  Score=52.41  Aligned_cols=77  Identities=16%  Similarity=0.283  Sum_probs=57.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      .++|+|.|+|.+|..+++.+...|. +|+++++++++.+.+++.|...+. .+..+   .+.+++..-..+|+++.+++.
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~~~---~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADPTD---ESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCTTC---HHHHHHSCCTTCSEEEECCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCCCC---HHHHHhCCcccCCEEEEecCC
Confidence            4679999999999999999999999 999999999999999888765433 21112   223343322379999999986


Q ss_pred             hH
Q 018627          274 TG  275 (353)
Q Consensus       274 ~~  275 (353)
                      ..
T Consensus        81 ~~   82 (141)
T 3llv_A           81 DE   82 (141)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.40  E-value=0.0012  Score=57.40  Aligned_cols=100  Identities=15%  Similarity=0.177  Sum_probs=67.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .+++|||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+.++..++..+- .    +.+.+.. +++|+||+++
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl-~----~~~~~~~-~~~D~vi~~a   92 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANL-E----EDFSHAF-ASIDAVVFAA   92 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCT-T----SCCGGGG-TTCSEEEECC
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEccc-H----HHHHHHH-cCCCEEEECC
Confidence            5789999998 9999999999999999 9999999999988887777622332211 1    2222222 2799999999


Q ss_pred             CChH-------------HHHHHHHHhcc-CCceEEEEcCCCC
Q 018627          272 GDTG-------------MITTALQSCCD-GWGLAVTLGVPKL  299 (353)
Q Consensus       272 g~~~-------------~~~~~~~~l~~-~~G~~v~~g~~~~  299 (353)
                      |...             .....++.++. +.+++|.++....
T Consensus        93 g~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  134 (236)
T 3e8x_A           93 GSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT  134 (236)
T ss_dssp             CCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred             CCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence            8521             11222333322 1278999988655

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.39  E-value=0.0011  Score=58.81  Aligned_cols=79  Identities=15%  Similarity=0.275  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-Ch--HHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCC--ceE--eCCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GT--VGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV--TEF--LNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~--vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~--~~~--~~~~~~~~~~~~~~~~~~-  260 (353)
                      .|+++||+|+ |.  +|.++++.+...|+ +|++++++++..+.++    +++.  ...  .|..+ ..++.+.+.+.. 
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN-DAEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS-SHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC-HHHHHHHHHHHHH
Confidence            5789999987 65  99999999999999 8999988875544433    3333  112  23331 333443333332 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       .+.+|++++++|.
T Consensus        84 ~~g~id~li~~Ag~   97 (266)
T 3oig_A           84 QVGVIHGIAHCIAF   97 (266)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCeeEEEEcccc
Confidence             2379999999874

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.39  E-value=0.0012  Score=57.60  Aligned_cols=78  Identities=14%  Similarity=0.268  Sum_probs=53.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-E--eCCCCCCccHHHHHHHHh--cCCccE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~dv  266 (353)
                      ++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+ ++... .  .|..+ ..++.+.+.+..  .+++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAH-HEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTS-HHHHHHHHHHHHHHHCSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHhcCCCcE
Confidence            578999998 8999999999999999 89999999988776533 32211 1  23221 223333333221  247999


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      +++++|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9999884

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.38  E-value=0.00095  Score=59.40  Aligned_cols=104  Identities=11%  Similarity=0.092  Sum_probs=66.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH---HhCCCce-E--eCCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA---KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~---~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .|+.+||+|+ +++|.+.++.+...|+ +|+++++++++.+.+   ++.|... .  .|..+ +.+..+.+.+..  -++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD-DAQCRDAVAQTIATFGR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence            6899999987 8999999999999999 898888887665443   3334322 2  23321 233333333322  248


Q ss_pred             ccEEEeccCCh------------------------HHHHHHHHHhccCCceEEEEcCCC
Q 018627          264 ADYSFECIGDT------------------------GMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       264 ~dvv~d~~g~~------------------------~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|++++++|..                        ...+.++..|+.++|++|.+++..
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  142 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKT  142 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTH
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehh
Confidence            99999999841                        112333445544349999998643

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.37  E-value=0.0011  Score=58.73  Aligned_cols=79  Identities=19%  Similarity=0.301  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce--E--eCCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--F--LNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~--~--~~~~~~~~~~~~~~~~~~-  260 (353)
                      .|+++||+|+ |  ++|++.++.+...|+ +|+.++++++.++.+.    +++...  .  .|..+ +.+..+.+.+.. 
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   82 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS-DEEVINGFEQIGK   82 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC-HHHHHHHHHHHHH
Confidence            6899999996 5  799999999999999 9999999987766543    334322  2  23321 233333333221 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++++++|.
T Consensus        83 ~~G~iD~lvnnAg~   96 (256)
T 4fs3_A           83 DVGNIDGVYHSIAF   96 (256)
T ss_dssp             HHCCCSEEEECCCC
T ss_pred             HhCCCCEEEecccc
Confidence             2489999999873

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.31  E-value=0.0012  Score=59.30  Aligned_cols=103  Identities=19%  Similarity=0.227  Sum_probs=65.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-HH----HHHhCCCceE-e--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CE----KAKAFGVTEF-L--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-~~----~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++ .+    .+++.|.... +  |..+ ..++.+.+.+..  -
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV-VEDIVRMFEEAVKIF  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5789999998 8999999999999999 88888777543 22    2344554332 2  2221 222333333221  2


Q ss_pred             CCccEEEeccCCh----------H---------------HHHHHHHHhccCCceEEEEcCCC
Q 018627          262 GGADYSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       262 ~~~dvv~d~~g~~----------~---------------~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +++|++|+++|..          +               ..+.++..++.. |++|.+++..
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~  166 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSIT  166 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCGG
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEechh
Confidence            4799999998842          1               123444555565 9999998643

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.31  E-value=0.0012  Score=58.78  Aligned_cols=79  Identities=23%  Similarity=0.325  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE-e--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .|+++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++.... +  |..+ ..++.+.+.+..  .+++|
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD  103 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSD-RKSIKQLAEVAEREMEGID  103 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS-HHHHHHHHHHHHHHHTSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCC-HHHHHHHHHHHHHHcCCCC
Confidence            5789999987 8999999999999999 899999998877655 44554332 2  2221 222333332221  24799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus       104 ~lvnnAg~  111 (266)
T 3grp_A          104 ILVNNAGI  111 (266)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.29  E-value=0.0016  Score=57.42  Aligned_cols=80  Identities=19%  Similarity=0.246  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-EeCCCCCC-ccHHHHHHHHh--cCCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FLNPNDNN-EPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~~~~~~~~-~~~~~~~~~~~--~~~~dv  266 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++... .+..+-.+ .++.+.+....  .+.+|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4788999998 8999999999999999 899999998876654 3344322 22221112 22333333221  247899


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      +++++|.
T Consensus        84 lv~~Ag~   90 (253)
T 1hxh_A           84 LVNNAGI   90 (253)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.26  E-value=0.0027  Score=55.67  Aligned_cols=80  Identities=21%  Similarity=0.182  Sum_probs=53.6

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-EeCCCCCCc-cHHHHHHHHhcCCccE
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FLNPNDNNE-PVQQVIKRITDGGADY  266 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~~~~~~~~~-~~~~~~~~~~~~~~dv  266 (353)
                      ..++++|||+|+ |++|.++++.+...|+ +|+++++++++++.+.+ +.... ++..+..+. .+.+.+.+ . +++|+
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~-~~id~   87 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK-T-SNLDI   87 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHT-C-SCCSE
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHh-c-CCCCE
Confidence            457899999998 8999999999999999 89999999988776643 33222 221211122 22222222 1 37999


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      +++++|.
T Consensus        88 li~~Ag~   94 (249)
T 3f9i_A           88 LVCNAGI   94 (249)
T ss_dssp             EEECCC-
T ss_pred             EEECCCC
Confidence            9999884

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.25  E-value=0.002  Score=57.05  Aligned_cols=79  Identities=19%  Similarity=0.301  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ ++++... .+  |..+ ..++.+.+.+..  -+++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTR-QDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC-HHHHHHHHHHHHHHcCCCC
Confidence            5789999997 8999999999999999 899999998876655 3344322 22  3321 223333333221  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.25  E-value=0.00069  Score=57.93  Aligned_cols=100  Identities=15%  Similarity=0.190  Sum_probs=70.1

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc-e--EeCCCCCCccHHHHHHHH
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-E--FLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~-~--~~~~~~~~~~~~~~~~~~  259 (353)
                      +..++.++++||-+|+|. |..++.+++. +. +|++++.+++.++.+++    .|.. .  ++..+  ..+   .+.  
T Consensus        49 ~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~---~~~--  118 (204)
T 3njr_A           49 AALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGT--APA---ALA--  118 (204)
T ss_dssp             HHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--TTG---GGT--
T ss_pred             HhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCc--hhh---hcc--
Confidence            556788999999999874 7788888887 77 99999999998887654    4554 2  22211  111   111  


Q ss_pred             hcCCccEEEeccCChH-HHHHHHHHhccCCceEEEEcCC
Q 018627          260 TDGGADYSFECIGDTG-MITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       260 ~~~~~dvv~d~~g~~~-~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ..+.||+|+...+... .+..+.+.|+++ |+++.....
T Consensus       119 ~~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~~  156 (204)
T 3njr_A          119 DLPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAVT  156 (204)
T ss_dssp             TSCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEECS
T ss_pred             cCCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEecC
Confidence            1137999997654322 678888999997 999987654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.24  E-value=0.0024  Score=57.24  Aligned_cols=79  Identities=16%  Similarity=0.279  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE---eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ ++++....   .|..+ ..++.+.+.+..  -+++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSS-AKDAESMVEKTTAKWGRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            5789999998 8999999999999999 999999998877655 33443322   23221 223333333221  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus       104 ~lv~nAg~  111 (277)
T 4dqx_A          104 VLVNNAGF  111 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999983

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=97.23  E-value=0.0026  Score=55.49  Aligned_cols=75  Identities=21%  Similarity=0.337  Sum_probs=51.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEEe
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSFE  269 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~d  269 (353)
                      ++++||+|+ |++|.++++.+...|+ +|+++++++++  ..+++|+..+ .|..  +.+..+.+.+..  -+++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLE--KDDPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTT--TSCHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCc--hHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999998 8999999999999999 89999888776  3334453322 2333  234443333321  247999999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      ++|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.22  E-value=0.0022  Score=57.18  Aligned_cols=79  Identities=22%  Similarity=0.279  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++++.+    ++.|....   .|..+ ..++.+.+.+..  .+
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   80 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD-RHSVAAFAQAAVDTWG   80 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            4688999998 8999999999999999 899999998876654    33343322   23321 223333333221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus        81 ~iD~lVnnAG~   91 (264)
T 3tfo_A           81 RIDVLVNNAGV   91 (264)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.21  E-value=0.0031  Score=56.02  Aligned_cols=79  Identities=19%  Similarity=0.236  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +++... .+  |..+ ..++.+.+.+..  -+.+|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD-PKAVEAVFAEALEEFGRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHHcCCCc
Confidence            4789999998 8999999999999999 9999999988776553 343221 22  3321 222333333221  24799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        83 ~lvnnAg~   90 (263)
T 2a4k_A           83 GVAHFAGV   90 (263)
T ss_dssp             EEEEGGGG
T ss_pred             EEEECCCC
Confidence            99999873

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.20  E-value=0.0021  Score=56.54  Aligned_cols=79  Identities=23%  Similarity=0.255  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhHH-HHHhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCE-KAKAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~~-~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++ ++.+ .+++.|... .+  |..+ ..++.+.+.+..  -+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHcCCC
Confidence            5789999998 8999999999999999 899998887 6554 345555432 22  3321 222333333221  2479


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++|+++|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.19  E-value=0.0021  Score=58.08  Aligned_cols=79  Identities=20%  Similarity=0.278  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-HH----HHHhCCCceE-e--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CE----KAKAFGVTEF-L--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-~~----~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ |++|.++++.+...|+ +|+++++++++ .+    .+++.|.... +  |..+ ..++.+.+.+..  -
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD-EQHCKDIVQETVRQL  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            5789999997 8999999999999999 88888877653 22    2234454332 2  3321 222333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus       124 g~iD~lvnnAg~  135 (291)
T 3ijr_A          124 GSLNILVNNVAQ  135 (291)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.18  E-value=0.0039  Score=52.20  Aligned_cols=100  Identities=18%  Similarity=0.154  Sum_probs=65.5

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCC---------CeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHH
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGA---------SRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRI  259 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~---------~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~  259 (353)
                      .++++++||.+|+|+ |..+..+++..+.         .+|++++.++...     ......+ ..+.......+.+...
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~   92 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILEV   92 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHHh
Confidence            367899999999986 8888899998763         4899999987531     1112233 2221122333444444


Q ss_pred             hcC-CccEEEe-----ccCCh------------HHHHHHHHHhccCCceEEEEcC
Q 018627          260 TDG-GADYSFE-----CIGDT------------GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       260 ~~~-~~dvv~d-----~~g~~------------~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .++ .||+|+.     +++..            ..+..+.+.|+++ |+++..-.
T Consensus        93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            444 8999994     33331            4567778899997 99988744

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.18  E-value=0.0025  Score=56.70  Aligned_cols=79  Identities=22%  Similarity=0.362  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCce-E--eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE-F--LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~-~--~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+     .+... .  .|..+ ..++.+.+.+..  -
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE-PDAPAELARRAAEAF   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-TTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence            5789999997 8999999999999999 89999999887654421     34322 1  23332 333433333322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.18  E-value=0.0022  Score=57.18  Aligned_cols=79  Identities=19%  Similarity=0.246  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ ++++... .  .|..+ ..++.+.+.+..  -+++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN-EVSVRALIDFTIDTFGRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC-HHHHHHHHHHHHHHcCCCC
Confidence            5789999997 8999999999999999 899999998876655 3344322 1  23321 223333333221  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.18  E-value=0.0018  Score=56.99  Aligned_cols=79  Identities=28%  Similarity=0.424  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+ ++... .  .|..+ ..++.+.+.+..  -+++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN-PESIEAVLKAITDEFGGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHCCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence            5789999987 8999999999999999 89999999887765533 33221 1  23331 223333333322  24799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        86 ~lv~nAg~   93 (248)
T 3op4_A           86 ILVNNAGI   93 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.17  E-value=0.0039  Score=55.64  Aligned_cols=102  Identities=24%  Similarity=0.329  Sum_probs=64.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHH----HHhCCCceE-e--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEK----AKAFGVTEF-L--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~----~~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++ +++++.+.    +++.|.... +  |..+ ..++.+.+.+..  .
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD-AEAIEQAIRETVEAL  107 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            6789999998 8999999999999999 787774 44444433    344454432 2  2221 223333333322  2


Q ss_pred             CCccEEEeccCCh-------------------------HHHHHHHHHhccCCceEEEEcCC
Q 018627          262 GGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       262 ~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +++|++++++|..                         ...+.+...++++ |++|.+++.
T Consensus       108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~  167 (271)
T 3v2g_A          108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSN  167 (271)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCG
T ss_pred             CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeCh
Confidence            3799999998741                         1233444566675 999999763

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.16  E-value=0.001  Score=52.75  Aligned_cols=77  Identities=21%  Similarity=0.378  Sum_probs=54.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+++|+|+|+|.+|..+++.+...|. +|+++++++++.+.+++.+...+. .+  ..+ .+.+.+..-+++|+++.+++
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-~d--~~~-~~~l~~~~~~~~d~vi~~~~   79 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-AN--ATE-ENELLSLGIRNFEYVIVAIG   79 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEEEE-CC--TTC-HHHHHTTTGGGCSEEEECCC
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEEEE-eC--CCC-HHHHHhcCCCCCCEEEECCC
Confidence            35679999999999999999999998 899999998888777666654332 11  111 23333321237999999998


Q ss_pred             Ch
Q 018627          273 DT  274 (353)
Q Consensus       273 ~~  274 (353)
                      ..
T Consensus        80 ~~   81 (144)
T 2hmt_A           80 AN   81 (144)
T ss_dssp             SC
T ss_pred             Cc
Confidence            63

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.16  E-value=0.0027  Score=57.56  Aligned_cols=80  Identities=24%  Similarity=0.314  Sum_probs=54.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--c
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~  261 (353)
                      -.|+++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|..+ ..++.+.+.+..  .
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  106 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH-LDEMVRLADEAFRLL  106 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhC
Confidence            36789999998 8999999999999999 899999998876654    2334332 2  23321 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus       107 g~id~lvnnAg~  118 (301)
T 3tjr_A          107 GGVDVVFSNAGI  118 (301)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999884

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.16  E-value=0.0023  Score=57.21  Aligned_cols=79  Identities=19%  Similarity=0.356  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCc-e--Ee--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-E--FL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~-~--~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+    ++.|.. .  .+  |..+ ..++.+.+.+..  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRSQ  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence            5789999998 9999999999999999 899999998776544    333421 1  22  3321 223333333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      .+++|++|+++|.
T Consensus       109 ~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          109 HSGVDICINNAGL  121 (279)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            2379999999883

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.15  E-value=0.0035  Score=56.67  Aligned_cols=105  Identities=19%  Similarity=0.263  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcC-Ch--HHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEe--CCCCCCccHHHHHHHHh--
Q 018627          192 SKGSTVVIFGL-GT--VGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~--vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      -.|+++||+|+ |.  +|.++++.+...|+ +|++++++++..+.+    ++.+....+  |..+ ..++.+.+.+..  
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVAD-AASIDAVFETLEKK  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHh
Confidence            46899999987 55  99999999999999 899998886544433    223432332  3321 223333333321  


Q ss_pred             cCCccEEEeccCChH-----------------------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          261 DGGADYSFECIGDTG-----------------------------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~-----------------------------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      -+++|++|+++|...                             ..+.++..++++ |++|.+++...
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~~~  173 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYYGA  173 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECGGG
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeehhh
Confidence            247999999988421                             123344556675 99999986433

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.15  E-value=0.0015  Score=57.66  Aligned_cols=75  Identities=23%  Similarity=0.257  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHHHHHhCCCceEe---CCCCCCccHHHHHHHH-hcCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKAKAFGVTEFL---NPNDNNEPVQQVIKRI-TDGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~-~~~~~d  265 (353)
                      .|+.+||+|+ +++|++.++.+...|+ +|+++++++  +..+.+++.|.....   |..+ ...    ++.. ..+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d-~~~----v~~~~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFAD-PLA----AKDSFTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTS-TTT----TTTSSTTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCC-HHH----HHHHHHhCCCC
Confidence            5899999987 8999999999999999 898888874  445666777755432   2221 111    1222 234899


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999985

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=97.14  E-value=0.003  Score=56.42  Aligned_cols=79  Identities=24%  Similarity=0.308  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.|... .  .|..+ ..++.+.+.+..  -+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND-ATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC-HHHHHHHHHHHHHHcC
Confidence            5789999987 8999999999999999 999999998776544    2233222 1  23321 223333333221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus       105 ~iD~lvnnAg~  115 (270)
T 3ftp_A          105 ALNVLVNNAGI  115 (270)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.13  E-value=0.0027  Score=56.56  Aligned_cols=103  Identities=18%  Similarity=0.245  Sum_probs=65.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHH----HHhCCCceE-e--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVTEF-L--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~----~~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++ ++++.+.    +++.|.... +  |..+ ..++.+.+.+..  -
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ-VPEIVKLFDQAVAHF   94 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5789999987 8999999999999999 7877644 4444333    344554332 2  2221 223333333322  2


Q ss_pred             CCccEEEeccCCh-------------------------HHHHHHHHHhccCCceEEEEcCCC
Q 018627          262 GGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       262 ~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +++|++++++|..                         ...+.++..++++ |++|.+++..
T Consensus        95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence            3799999998841                         1234455567776 9999998755

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.13  E-value=0.003  Score=56.61  Aligned_cols=79  Identities=19%  Similarity=0.358  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ ++++... .+  |..+ ..++.+.+.+..  -+++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSD-EQQIIAMVDACVAAFGGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTC-HHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            5789999987 8999999999999999 999999998877655 3344322 22  3321 222333333221  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.12  E-value=0.0026  Score=56.31  Aligned_cols=79  Identities=25%  Similarity=0.366  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-HHHHH-hC----CCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAK-AF----GVTE-FL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-~~~~~-~~----G~~~-~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++ .+.+. ++    |... .+  |..+ ..++.+.+.+..  
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK-GEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence            4688999997 8999999999999999 89999888776 44332 22    4332 22  2221 222333333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++|+++|.
T Consensus        81 ~g~iD~lv~~Ag~   93 (260)
T 1x1t_A           81 MGRIDILVNNAGI   93 (260)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999873

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.12  E-value=0.0021  Score=58.86  Aligned_cols=79  Identities=18%  Similarity=0.209  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCC--c-eEe--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV--T-EFL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~--~-~~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .+++|||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.+.  . .++  |..+ ..++.+.+....  
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS-REGFKMAADEVEAR   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC-HHHHHHHHHHHHHh
Confidence            5789999998 8999999999999999 8999999988766542    2232  1 122  3321 223333333321  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      .+++|++|+++|.
T Consensus        85 ~g~id~lv~nAg~   97 (319)
T 3ioy_A           85 FGPVSILCNNAGV   97 (319)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCCCEEEECCCc
Confidence            2479999999983

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.12  E-value=0.0023  Score=57.26  Aligned_cols=80  Identities=16%  Similarity=0.241  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      ..++++||+|+ +++|.++++.+...|+ +|+++++++++++.+ ++++... .+  |..+ ..++.+.+.+..  -+++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTD-PDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence            35788999998 8999999999999999 899999998887655 3344221 22  3321 223333333221  2479


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++++++|.
T Consensus       104 D~lVnnAg~  112 (272)
T 4dyv_A          104 DVLFNNAGT  112 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.11  E-value=0.0011  Score=59.57  Aligned_cols=79  Identities=18%  Similarity=0.251  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C---CC-c-eEe--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F---GV-T-EFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~---G~-~-~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ +   +. . ..+  |..+ ..++.+.+.+..  .
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD-PDQVAALFAAVRAEF  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            6789999997 8999999999999999 89999999887665422 1   21 1 222  3321 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=97.10  E-value=0.0066  Score=52.48  Aligned_cols=76  Identities=14%  Similarity=0.122  Sum_probs=50.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-E--eCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-F--LNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~--~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      +++||+|+ |++|.+++..+...|+ +|+++++++++.+.+.+ ++... .  .|..  +.+-.+.+.+...+.+|++++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~--~~~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLA--SHQEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTT--CHHHHHHHHHSCSSCCSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCC--CHHHHHHHHHHHhhcCCEEEE
Confidence            46899998 8999999999999999 89999999988776644 43221 1  2322  222222222223335699999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      ++|.
T Consensus        79 ~Ag~   82 (230)
T 3guy_A           79 SAGS   82 (230)
T ss_dssp             CCCC
T ss_pred             eCCc
Confidence            9883

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.10  E-value=0.002  Score=56.61  Aligned_cols=79  Identities=24%  Similarity=0.334  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEe---CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFL---NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~---~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ ++++.....   |.. +..++.+.+.+..  .+++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADIS-DPGSVKALFAEIQALTGGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTT-CHHHHHHHHHHHHHHHSCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCC-CHHHHHHHHHHHHHHCCCCC
Confidence            5789999997 8999999999999999 999999998877655 345543322   222 1222333333221  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        83 ~lv~nAg~   90 (247)
T 3rwb_A           83 ILVNNASI   90 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999984

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.10  E-value=0.0034  Score=56.23  Aligned_cols=79  Identities=23%  Similarity=0.235  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhhHHHH----HhCCCceE---eCCCCCCccH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCEKA----KAFGVTEF---LNPNDNNEPV  252 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~------------~~~~~~~----~~~G~~~~---~~~~~~~~~~  252 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++            .++.+.+    ++.+....   .|..+ ..++
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v   86 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD-RAAV   86 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC-HHHH
Confidence            5789999998 8999999999999999 89998876            4443332    33443322   23321 2233


Q ss_pred             HHHHHHHh--cCCccEEEeccCC
Q 018627          253 QQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       253 ~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      .+.+.+..  -+++|++++++|.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~  109 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGI  109 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCc
Confidence            33333322  2379999999884

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.10  E-value=0.0035  Score=54.83  Aligned_cols=79  Identities=20%  Similarity=0.307  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCC---CceEe--CCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFG---VTEFL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G---~~~~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. ++.   -...+  |..+ ..++.+.+....  .++
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence            4788999998 8999999999999999 8999999987765542 222   11222  2221 222333333221  137


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|+++|.
T Consensus        83 id~li~~Ag~   92 (251)
T 1zk4_A           83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.10  E-value=0.0046  Score=54.74  Aligned_cols=80  Identities=19%  Similarity=0.253  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      -.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.|... ++  |..+ ..++.+.+....  .
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH-SDAIAAFATGVLAAH  104 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHhc
Confidence            35789999997 8999999999999999 899999998876654    2334332 22  3221 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|++|+++|.
T Consensus       105 g~id~lv~~Ag~  116 (262)
T 3rkr_A          105 GRCDVLVNNAGV  116 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999885

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.10  E-value=0.0039  Score=54.00  Aligned_cols=78  Identities=14%  Similarity=0.134  Sum_probs=52.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceEe--CCCCCCccHHHHHHHHh--cCCccEE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      ++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. +++-...+  |..+ ..++.+.+....  -+++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVRE-EGDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            578999988 8999999999999999 8999999988776553 34322222  3321 223333333221  1379999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      |+++|.
T Consensus        83 i~~Ag~   88 (234)
T 2ehd_A           83 VNNAGV   88 (234)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.10  E-value=0.0022  Score=56.24  Aligned_cols=79  Identities=22%  Similarity=0.260  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceE-eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++|+..+ .|..+ ..++.+.+.+..  .+++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            4688999998 8999999999999999 8999999988776553 4563322 23321 223333333221  2379999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      ++++|.
T Consensus        82 vn~Ag~   87 (245)
T 1uls_A           82 VHYAGI   87 (245)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999883

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.10  E-value=0.0036  Score=55.44  Aligned_cols=79  Identities=28%  Similarity=0.414  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.|... .+  |..+ ..++.+.+.+..  -+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence            5789999998 8999999999999999 899999998776543    2234332 22  3321 222322333221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus        84 ~id~lv~nAg~   94 (262)
T 1zem_A           84 KIDFLFNNAGY   94 (262)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.09  E-value=0.0042  Score=56.10  Aligned_cols=105  Identities=17%  Similarity=0.196  Sum_probs=64.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHH----HHHhCCCceEeCCCC-CC-ccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCE----KAKAFGVTEFLNPND-NN-EPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~----~~~~~G~~~~~~~~~-~~-~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++.  ++.+    .+++.|.......-+ .+ .++.+.+.+..  -
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999998 8999999999999999 898887762  2222    234455443322111 12 22222222221  2


Q ss_pred             CCccEEEeccCChH--------------------------HHHHHHHHhccCCceEEEEcCCCC
Q 018627          262 GGADYSFECIGDTG--------------------------MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       262 ~~~dvv~d~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +++|++++++|...                          ..+.++..++++ |++|.+++...
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~~~  189 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSIQA  189 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCGGG
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECChhh
Confidence            47999999988410                          122233456666 99999987433

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.09  E-value=0.0033  Score=56.86  Aligned_cols=79  Identities=20%  Similarity=0.331  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ |  ++|.++++.+...|+ +|++++++++..+.+    ++.+....+  |..+ ..++.+.+.+..  -
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSD-AESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5789999987 5  899999999999999 899998987654443    333433333  3321 223333333322  1


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus       107 g~iD~lVnnAG~  118 (296)
T 3k31_A          107 GSLDFVVHAVAF  118 (296)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999984

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.07  E-value=0.0025  Score=57.75  Aligned_cols=79  Identities=22%  Similarity=0.278  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCC---c-eEe--CCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGV---T-EFL--NPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~---~-~~~--~~~~~~~~~~~~~~~~~-  260 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.|.   . ..+  |..+ ..++.+.+.+.. 
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~  102 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA  102 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC-HHHHHHHHHHHHH
Confidence            5788999987 8999999999999999 899999998776544    22333   1 122  3321 222333333221 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++|+++|.
T Consensus       103 ~~g~iD~lvnnAG~  116 (297)
T 1xhl_A          103 KFGKIDILVNNAGA  116 (297)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence             2479999999873

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.06  E-value=0.0041  Score=55.64  Aligned_cols=79  Identities=20%  Similarity=0.229  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh-cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT-DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~-~~~  263 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|..+ ..+..+.+.... .++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE-AGAGTDLIERAEAIAP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS-TTHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence            5789999987 8999999999999999 899998888765443    3334332 2  23321 233333333221 158


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus       110 iD~lvnnAg~  119 (275)
T 4imr_A          110 VDILVINASA  119 (275)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999984

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.06  E-value=0.0043  Score=54.98  Aligned_cols=104  Identities=19%  Similarity=0.293  Sum_probs=64.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hC-----CCc-eEe--CCCCCCccHHHHHHHHh-
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF-----GVT-EFL--NPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~-----G~~-~~~--~~~~~~~~~~~~~~~~~-  260 (353)
                      -.++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++     +.. ..+  |..+ ..++.+.+.... 
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~   82 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVD   82 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence            35789999998 8999999999999999 8999999887755432 22     111 122  3321 223333333221 


Q ss_pred             -cCCccEEEeccCCh--H---------------HHHHHHHHhcc-----CCceEEEEcCCC
Q 018627          261 -DGGADYSFECIGDT--G---------------MITTALQSCCD-----GWGLAVTLGVPK  298 (353)
Q Consensus       261 -~~~~dvv~d~~g~~--~---------------~~~~~~~~l~~-----~~G~~v~~g~~~  298 (353)
                       -+++|++++++|..  .               .....+..++.     . |++|.+++..
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~~  142 (267)
T 2gdz_A           83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSLA  142 (267)
T ss_dssp             HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCGG
T ss_pred             HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCcc
Confidence             23799999999842  1               12233444543     4 8999998643

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=97.05  E-value=0.0027  Score=56.02  Aligned_cols=75  Identities=13%  Similarity=0.032  Sum_probs=51.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH---hCCCceEeCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK---AFGVTEFLNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~---~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      +++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.   +.|...... +  ..++.+.+.+..  -+++|+++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d--~~~v~~~~~~~~~~~g~iD~lv   77 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-S--EQEPAELIEAVTSAYGQVDVLV   77 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-C--CCSHHHHHHHHHHHHSCCCEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-C--HHHHHHHHHHHHHHhCCCCEEE
Confidence            46899987 8999999999999999 8999988887765543   224332221 1  334443333321  24799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus        78 ~nAg~   82 (254)
T 1zmt_A           78 SNDIF   82 (254)
T ss_dssp             EECCC
T ss_pred             ECCCc
Confidence            99874

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.05  E-value=0.0015  Score=55.36  Aligned_cols=103  Identities=13%  Similarity=0.102  Sum_probs=71.0

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce--EeCCCCCCccHHHHHHHH
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~--~~~~~~~~~~~~~~~~~~  259 (353)
                      ....+++++++||-+|+|. |..+..+++.....+|++++.+++.++.+++    .|...  ++..+  ..+   .+.  
T Consensus        33 l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~---~~~--  104 (204)
T 3e05_A           33 LSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF--APE---GLD--  104 (204)
T ss_dssp             HHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC--TTT---TCT--
T ss_pred             HHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC--hhh---hhh--
Confidence            3556788999999999873 7888888888644499999999998887754    34332  22111  100   110  


Q ss_pred             hcCCccEEEeccC---ChHHHHHHHHHhccCCceEEEEcCC
Q 018627          260 TDGGADYSFECIG---DTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       260 ~~~~~dvv~d~~g---~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ..+.+|+|+....   ....+..+.+.|+++ |+++.....
T Consensus       105 ~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  144 (204)
T 3e05_A          105 DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAVT  144 (204)
T ss_dssp             TSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEECB
T ss_pred             cCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEecc
Confidence            1137999998754   245678888999997 999987543

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.05  E-value=0.0024  Score=57.06  Aligned_cols=79  Identities=20%  Similarity=0.304  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+ ++++... .+  |..+ ...+.+.+.+..  .+++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTD-GERIDVVAADVLARYGRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCC-HHHHHHHHHHHHHhCCCCC
Confidence            4688999987 8999999999999999 999999998876655 3344322 22  3221 222333333221  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|+++|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.05  E-value=0.0036  Score=56.47  Aligned_cols=80  Identities=19%  Similarity=0.231  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce--E--eCCCCCC-ccHHHHHHHHh-
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--F--LNPNDNN-EPVQQVIKRIT-  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~--~--~~~~~~~-~~~~~~~~~~~-  260 (353)
                      ..++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.+...  .  .|..+ . ......+.... 
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~v~~~~~~~~~   87 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD-PIATMSSLADFIKT   87 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS-CHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC-cHHHHHHHHHHHHH
Confidence            45789999998 8999999999999999 999999998775543    3333221  2  23331 2 22222222221 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       .+++|++|+++|.
T Consensus        88 ~~g~iD~lv~nAg~  101 (311)
T 3o26_A           88 HFGKLDILVNNAGV  101 (311)
T ss_dssp             HHSSCCEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             2479999999984

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.04  E-value=0.0037  Score=55.13  Aligned_cols=78  Identities=17%  Similarity=0.207  Sum_probs=51.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      ++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.|... .+  |..+ ..++.+.+.+..  -++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence            578999998 8999999999999999 899999998776543    2234322 22  3321 223333333221  247


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|+++|.
T Consensus        80 id~lv~nAg~   89 (256)
T 1geg_A           80 FDVIVNNAGV   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.04  E-value=0.0035  Score=55.45  Aligned_cols=80  Identities=15%  Similarity=0.218  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--  260 (353)
                      ..++++||+|+ |++|.++++.+...|+ +|+++ ++++++.+.+    ++.|.... +  |..+ ..++.+.+....  
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   79 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ-PAKIKEMFQQIDET   79 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            35789999987 8999999999999999 77775 8887765544    33443332 2  3221 223333333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++++++|.
T Consensus        80 ~g~id~lv~nAg~   92 (258)
T 3oid_A           80 FGRLDVFVNNAAS   92 (258)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999973

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=97.03  E-value=0.0045  Score=55.23  Aligned_cols=79  Identities=25%  Similarity=0.270  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhhHHHH----HhCCCceE-e--CCCCCCccH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCEKA----KAFGVTEF-L--NPNDNNEPV  252 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~------------~~~~~~~----~~~G~~~~-~--~~~~~~~~~  252 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++            +++.+.+    ++.+.... +  |..+ ..++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v   89 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRD-RESL   89 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHH
Confidence            5789999997 8999999999999999 89999876            4443332    33343322 2  3221 2233


Q ss_pred             HHHHHHHh--cCCccEEEeccCC
Q 018627          253 QQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       253 ~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      .+.+.+..  -+++|++|+++|.
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            33333221  2479999999984

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.02  E-value=0.0047  Score=53.77  Aligned_cols=77  Identities=18%  Similarity=0.211  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceEeCCCCCCccHHHHHHHHhc--CCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITD--GGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~dvv~  268 (353)
                      +++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++....++..+-.+.   +.+.+...  +++|++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW---EATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTTCCCCCEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH---HHHHHHHHHcCCCCEEE
Confidence            5789999998 8999999999999999 8999999988776553 342223332221122   22333222  3799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus        82 ~~Ag~   86 (244)
T 3d3w_A           82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99874

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.01  E-value=0.0058  Score=54.26  Aligned_cols=79  Identities=22%  Similarity=0.376  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC---ceEe--CCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV---TEFL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~---~~~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++.   ...+  |..+ ..++.+.+.+..  .++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHGK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence            5789999998 8999999999999999 899998988765544 33322   1222  3221 222333333221  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|+++|.
T Consensus        93 id~li~~Ag~  102 (278)
T 2bgk_A           93 LDIMFGNVGV  102 (278)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999873

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.01  E-value=0.0037  Score=55.65  Aligned_cols=103  Identities=17%  Similarity=0.247  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--  260 (353)
                      ..++++||+|+ +++|.++++.+...|+ +|+++ .+++++.+.+    ++.|.... +  |..+ ..++.+.+.+..  
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD-PAAVRRLFATAEEA  102 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHH
Confidence            35789999997 8999999999988999 77766 5555554433    33454332 2  3321 222333333221  


Q ss_pred             cCCccEEEeccCCh-------------------------HHHHHHHHHhccCCceEEEEcCC
Q 018627          261 DGGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       261 ~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      -+++|++++++|..                         ...+.++..++++ |++|.+++.
T Consensus       103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~  163 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMSTS  163 (267)
T ss_dssp             HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCT
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeCh
Confidence            24799999999841                         1133444566776 999999863

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.01  E-value=0.0057  Score=54.68  Aligned_cols=80  Identities=25%  Similarity=0.322  Sum_probs=52.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-------------ChhhHHHH----HhCCCceE---eCCCCCCc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-------------NPEKCEKA----KAFGVTEF---LNPNDNNE  250 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-------------~~~~~~~~----~~~G~~~~---~~~~~~~~  250 (353)
                      -.|+++||+|+ +++|.++++.+...|+ +|+++++             ++++.+.+    ++.|....   .|..+ ..
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~   90 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD-DA   90 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC-HH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HH
Confidence            46889999997 8999999999999999 8998877             45554433    33443332   23321 22


Q ss_pred             cHHHHHHHHh--cCCccEEEeccCC
Q 018627          251 PVQQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       251 ~~~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      ++.+.+.+..  -+++|++++++|.
T Consensus        91 ~v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           91 ALRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCC
Confidence            3333333221  2479999999884

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.01  E-value=0.0057  Score=52.11  Aligned_cols=92  Identities=13%  Similarity=0.181  Sum_probs=62.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      +|||+|+ |.+|..+++.+...|. +|+++++++++.+.+. -++..+ .|..  +.+. +.+     +++|+||+++|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~--d~~~-~~~-----~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIF--DLTL-SDL-----SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGG--GCCH-HHH-----TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEecccc--Chhh-hhh-----cCCCEEEECCcC
Confidence            6999998 9999999999999998 9999999988876654 333332 1222  2222 111     369999999986


Q ss_pred             h--------HHHHHHHHHhccC-CceEEEEcCC
Q 018627          274 T--------GMITTALQSCCDG-WGLAVTLGVP  297 (353)
Q Consensus       274 ~--------~~~~~~~~~l~~~-~G~~v~~g~~  297 (353)
                      .        ......++.++.. .++++.+++.
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            3        2234555566553 2688888764

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=97.01  E-value=0.0069  Score=53.32  Aligned_cols=41  Identities=15%  Similarity=0.328  Sum_probs=35.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~  234 (353)
                      .++++||+|+ |++|..++..+...|+ +|+++++++++.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~   47 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQET   47 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHH
Confidence            4789999998 8999999999999999 899999998876654

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.00  E-value=0.0068  Score=53.82  Aligned_cols=79  Identities=19%  Similarity=0.181  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhC--CCce-EeCCCCCCccHHHHHHHHhcCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAF--GVTE-FLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~--G~~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.  +... .+..+..+.+..+.+.+. -+++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~g~i   86 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK-YPKV   86 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH-CCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh-cCCC
Confidence            5789999987 8999999999999999 899999998776543    222  2211 121111122222222222 2479


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++++++|.
T Consensus        87 d~lv~nAg~   95 (267)
T 3t4x_A           87 DILINNLGI   95 (267)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.98  E-value=0.0051  Score=54.73  Aligned_cols=79  Identities=19%  Similarity=0.237  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..++..+...|+ +|+++++++++.+.+    ++.|... .+  |..+ ..++.+.+.+..  .+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEIG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCC-HHHHHHHHHHHHHHCC
Confidence            5789999998 8999999999999999 899999988776543    3334332 22  3221 222333333221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.98  E-value=0.0032  Score=55.14  Aligned_cols=79  Identities=22%  Similarity=0.336  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+    ++.+... .+  |..+ ..++.+.+.+..  -
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN-AEDVTNMVKQTVDVF   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4688999998 8999999999999999 8888877 77665433    3334332 22  3321 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.96  E-value=0.0031  Score=55.81  Aligned_cols=79  Identities=16%  Similarity=0.235  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHH----HHhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~----~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++ .+++++.+.    +++.|... .+  |..+ ..+..+.+.+..  -
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN-AAEVEAAISAAADKF   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence            5789999997 8999999999999999 78777 666554443    23444332 22  3221 222333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        85 g~id~lv~nAg~   96 (259)
T 3edm_A           85 GEIHGLVHVAGG   96 (259)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999873

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.96  E-value=0.0043  Score=54.62  Aligned_cols=79  Identities=23%  Similarity=0.283  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh--HHHHHhCCCceE-e--CCCCCCccHHHHHHHHh--cCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++++.  .+.+++.|.... +  |..+ ..++.+.+.+..  -+++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSD-VAQIEALFALAEREFGGV   80 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTS-HHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCC-HHHHHHHHHHHHHHcCCC
Confidence            4688999998 8999999999999999 89999887652  223333453322 2  2221 222333333221  2379


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++|+++|.
T Consensus        81 d~lv~~Ag~   89 (255)
T 2q2v_A           81 DILVNNAGI   89 (255)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.96  E-value=0.005  Score=54.95  Aligned_cols=79  Identities=20%  Similarity=0.274  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-------HH----HHHhCCCceE---eCCCCCCccHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------CE----KAKAFGVTEF---LNPNDNNEPVQQVIK  257 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-------~~----~~~~~G~~~~---~~~~~~~~~~~~~~~  257 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++.++       ++    .+++.|....   .|..+ ..+..+.+.
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~   82 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE-EDQVRAAVA   82 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC-HHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHH
Confidence            5789999998 8999999999999999 89999888653       22    2233343322   23321 222333333


Q ss_pred             HHh--cCCccEEEeccCC
Q 018627          258 RIT--DGGADYSFECIGD  273 (353)
Q Consensus       258 ~~~--~~~~dvv~d~~g~  273 (353)
                      +..  .+++|++++++|.
T Consensus        83 ~~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCc
Confidence            322  2479999999984

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.94  E-value=0.0032  Score=55.62  Aligned_cols=79  Identities=15%  Similarity=0.221  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHH----HhCCCc-eEe--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKA----KAFGVT-EFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~----~~~G~~-~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|..+++.+.. .|+ +|++++++.++.+.+    ++.+.. ..+  |..+ ..++.+.+.+..  .
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKEY   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHhc
Confidence            5789999998 9999999998888 899 899998987765433    223422 222  3221 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        81 g~id~li~~Ag~   92 (276)
T 1wma_A           81 GGLDVLVNNAGI   92 (276)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.94  E-value=0.0038  Score=55.27  Aligned_cols=79  Identities=16%  Similarity=0.237  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC--CceE-eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG--VTEF-LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G--~~~~-~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ +.  +..+ .|..+ ..++.+.+.+..  -+++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK-RASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC-HHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4789999998 8999999999999999 99999999887765533 32  2211 23321 223333333221  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|+++|.
T Consensus        89 ~lv~~Ag~   96 (263)
T 3ak4_A           89 LLCANAGV   96 (263)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.93  E-value=0.0082  Score=51.41  Aligned_cols=100  Identities=9%  Similarity=0.108  Sum_probs=63.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHH-HCCCCeEEEEcCChh-hHHHHHhCCCc-eEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          195 STVVIFGL-GTVGLSVAQGAK-ARGASRIIGVDTNPE-KCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~-~~g~~~vi~~~~~~~-~~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      ++|||+|+ |.+|..+++.+. ..|+ +|++++++++ +.+.+.+.+.. .++..+-.+   .+.+.+.. .++|++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~-~~~d~vv~~   80 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQN---PGXLEQAV-TNAEVVFVG   80 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTC---HHHHHHHH-TTCSEEEES
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCC---HHHHHHHH-cCCCEEEEc
Confidence            56999997 999999999888 8999 9999999988 76665322222 222121112   12333332 268999999


Q ss_pred             cCChHH-HHHHHHHhccC-CceEEEEcCCCC
Q 018627          271 IGDTGM-ITTALQSCCDG-WGLAVTLGVPKL  299 (353)
Q Consensus       271 ~g~~~~-~~~~~~~l~~~-~G~~v~~g~~~~  299 (353)
                      +|.... ....++.++.. .+++|.++....
T Consensus        81 ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~  111 (221)
T 3r6d_A           81 AMESGSDMASIVKALSRXNIRRVIGVSMAGL  111 (221)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred             CCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence            986211 34444445432 268998876544

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.92  E-value=0.0033  Score=55.41  Aligned_cols=81  Identities=23%  Similarity=0.226  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----C-C--CceE-eCCCCCC-ccHHHHHHHHh-
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F-G--VTEF-LNPNDNN-EPVQQVIKRIT-  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~-G--~~~~-~~~~~~~-~~~~~~~~~~~-  260 (353)
                      -.|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+    . +  +..+ .|....+ .+..+.+.+.. 
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            36889999998 8999999999999999 89999999887665422    1 1  1111 2221012 22333333221 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       .+++|++++++|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             2479999999884

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.92  E-value=0.0069  Score=51.80  Aligned_cols=92  Identities=17%  Similarity=0.253  Sum_probs=62.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      +|||+|+ |.+|..++..+...|. +|+++++++++.+.+...++..+. |..  +.+. +.+     +++|+||+++|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~--d~~~-~~~-----~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPL--VLTE-ADL-----DSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGG--GCCH-HHH-----TTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEecccc--cccH-hhc-----ccCCEEEECCcc
Confidence            5999998 9999999999999998 999999999887766444444332 322  2222 111     369999999986


Q ss_pred             h----------HHHHHHHHHhccCCceEEEEcC
Q 018627          274 T----------GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       274 ~----------~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .          ......++.++...+++|.+++
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            2          1234444555543378888864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.92  E-value=0.008  Score=53.61  Aligned_cols=80  Identities=24%  Similarity=0.280  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-------------ChhhHHHH----HhCCCceE---eCCCCCCc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-------------NPEKCEKA----KAFGVTEF---LNPNDNNE  250 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-------------~~~~~~~~----~~~G~~~~---~~~~~~~~  250 (353)
                      -.|+++||+|+ +++|.++++.+...|+ +|+++++             +.++++.+    ++.+....   .|..+ ..
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~   86 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD-FD   86 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HH
Confidence            35789999998 8999999999999999 8999877             44444332    33443322   23221 22


Q ss_pred             cHHHHHHHHh--cCCccEEEeccCC
Q 018627          251 PVQQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       251 ~~~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      ++.+.+.+..  -+++|++++++|.
T Consensus        87 ~v~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           87 RLRKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCC
Confidence            3333333321  2479999999874

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.92  E-value=0.0019  Score=56.39  Aligned_cols=103  Identities=17%  Similarity=0.146  Sum_probs=69.6

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh---
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT---  260 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~---  260 (353)
                      .+..++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|....+...  ..+..+.+....   
T Consensus        56 ~~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~--~~d~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLK--LGSALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEE--ECCHHHHHHHHHhhc
Confidence            345678999999987 5888888998874 2399999999988877755    3543311111  123333333321   


Q ss_pred             -----------c-CCccEEEeccCCh---HHHHHHHHHhccCCceEEEEc
Q 018627          261 -----------D-GGADYSFECIGDT---GMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       261 -----------~-~~~dvv~d~~g~~---~~~~~~~~~l~~~~G~~v~~g  295 (353)
                                 + +.||+||......   ..+..+.+.|+++ |+++...
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence                       2 5799999876543   4567888999997 9998753

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.91  E-value=0.0089  Score=55.48  Aligned_cols=49  Identities=41%  Similarity=0.542  Sum_probs=42.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      -.|++|.|.|.|.+|+.+++.++.+|+ +|++++.+.++.++.+++|+..
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~  221 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTA  221 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEE
Confidence            479999999999999999999999999 8889998887766677777643

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.90  E-value=0.0065  Score=53.41  Aligned_cols=98  Identities=18%  Similarity=0.237  Sum_probs=63.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhc--CCccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD--GGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~dvv~d  269 (353)
                      -++++||+|+ |++|.++++.+...|+ +|+++++++++.+.     ....++.. +..++.+.+.+...  +++|++++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~-d~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDS-GEEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCS-SHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence            3688999998 8999999999999999 89999888765321     11122222 12333334443322  37999999


Q ss_pred             ccCCh-------H-------------------HHHHHHHHhccCCceEEEEcCCC
Q 018627          270 CIGDT-------G-------------------MITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       270 ~~g~~-------~-------------------~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ++|..       .                   ..+.+...++++ |++|.+++..
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~  147 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGASA  147 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEechh
Confidence            99831       0                   123344556675 9999998643

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.90  E-value=0.0016  Score=57.80  Aligned_cols=79  Identities=14%  Similarity=0.157  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhH-HHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC-EKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~-~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++. +.+++.++..+ .|..+ ..++.+.+.+..  .+++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC-ETGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS-HHHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC-HHHHHHHHHHHHHhcCCCCEE
Confidence            4688999987 8999999999999999 888888887653 44455564433 23321 223333333321  2479999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      ++++|.
T Consensus       104 v~nAg~  109 (260)
T 3gem_A          104 VHNASE  109 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999883

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.90  E-value=0.0034  Score=55.25  Aligned_cols=79  Identities=20%  Similarity=0.254  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----C--C--CceEe--CCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--G--VTEFL--NPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~--G--~~~~~--~~~~~~~~~~~~~~~~~-  260 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+    .  +  -...+  |..+ ..++.+.+.+.. 
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   83 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD-CTKADTEIKDIHQ   83 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC-HHHHHHHHHHHHH
Confidence            5789999998 8999999999999999 99999999887665532    1  2  11122  3321 223333333221 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       .+++|++++++|.
T Consensus        84 ~~g~iD~lvnnAg~   97 (250)
T 3nyw_A           84 KYGAVDILVNAAAM   97 (250)
T ss_dssp             HHCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence             2479999999984

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.90  E-value=0.0036  Score=55.86  Aligned_cols=79  Identities=15%  Similarity=0.213  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hC---C---Cc-eE--eCCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF---G---VT-EF--LNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~---G---~~-~~--~~~~~~~~~~~~~~~~~~-  260 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++   .   .. ..  .|..+ ..++.+.+.+.. 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~   82 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG   82 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC-HHHHHHHHHHHHH
Confidence            4688999998 8999999999999999 8999999988766542 22   2   11 11  23321 222333333221 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++|+++|.
T Consensus        83 ~~g~id~lv~~Ag~   96 (278)
T 1spx_A           83 KFGKLDILVNNAGA   96 (278)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HcCCCCEEEECCCC
Confidence             2379999999874

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=96.89  E-value=0.0061  Score=50.02  Aligned_cols=104  Identities=16%  Similarity=0.178  Sum_probs=70.9

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc-eEeCCCCCCccHHHHHHHHhc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~-~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      +...+.++++||.+|+|. |..+..+++..+..+|++++.+++..+.+++    .|.. .+....+ .   .+.+.. ..
T Consensus        19 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d-~---~~~~~~-~~   92 (178)
T 3hm2_A           19 SALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQG-A---PRAFDD-VP   92 (178)
T ss_dssp             HHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECC-T---TGGGGG-CC
T ss_pred             HHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecc-h---Hhhhhc-cC
Confidence            455778999999999874 8888888888743499999999988887754    4544 2211111 1   111111 11


Q ss_pred             CCccEEEeccCC--hHHHHHHHHHhccCCceEEEEcCC
Q 018627          262 GGADYSFECIGD--TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       262 ~~~dvv~d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +.||+|+.....  ...+..+.+.|+++ |+++.....
T Consensus        93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  129 (178)
T 3hm2_A           93 DNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAVT  129 (178)
T ss_dssp             SCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEECS
T ss_pred             CCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEeec
Confidence            579999976543  24688889999997 999977543

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.88  E-value=0.003  Score=56.08  Aligned_cols=79  Identities=16%  Similarity=0.206  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh---hHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~-  260 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++..   +.+.+    ++.|....   .|..+ ..+..+.+.+.. 
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~   87 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN-EEEVAKLFDFAEK   87 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHH
Confidence            5789999987 8999999999999999 8888765443   33322    23343322   23321 222333333221 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++++++|.
T Consensus        88 ~~g~iD~lvnnAg~  101 (262)
T 3ksu_A           88 EFGKVDIAINTVGK  101 (262)
T ss_dssp             HHCSEEEEEECCCC
T ss_pred             HcCCCCEEEECCCC
Confidence             2479999999983

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.88  E-value=0.012  Score=52.54  Aligned_cols=80  Identities=19%  Similarity=0.237  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--  260 (353)
                      ..++++||+|+ +++|.++++.+...|+ +|+++++ ++++.+.+    ++.|.... +  |..+ ..++.+.+.+..  
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  104 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD-LSSHQATVDAVVAE  104 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS-GGGHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHH
Confidence            45789999997 8999999999999999 8888874 66554433    33443322 2  3331 334444443322  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++|+++|.
T Consensus       105 ~g~iD~lvnnAg~  117 (280)
T 4da9_A          105 FGRIDCLVNNAGI  117 (280)
T ss_dssp             HSCCCEEEEECC-
T ss_pred             cCCCCEEEECCCc
Confidence            2379999999985

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.88  E-value=0.0039  Score=55.10  Aligned_cols=79  Identities=23%  Similarity=0.358  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C-----CCc-eEe--CCCCCCccHHHHHHHHhcC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F-----GVT-EFL--NPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~-----G~~-~~~--~~~~~~~~~~~~~~~~~~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ +     +.. ..+  |..+ ..++.+.+.+....
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE-PGDIDRLFEKARDL   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC-HHHHHHHHHHHHHh
Confidence            5789999998 8999999999999999 89999999877654422 2     211 222  3321 22333333333222


Q ss_pred             -CccEEEeccCC
Q 018627          263 -GADYSFECIGD  273 (353)
Q Consensus       263 -~~dvv~d~~g~  273 (353)
                       ++|++|+++|.
T Consensus        84 ~gid~lv~~Ag~   95 (260)
T 2z1n_A           84 GGADILVYSTGG   95 (260)
T ss_dssp             TCCSEEEECCCC
T ss_pred             cCCCEEEECCCC
Confidence             49999999883

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.88  E-value=0.0015  Score=58.24  Aligned_cols=79  Identities=19%  Similarity=0.186  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++++.+..-.+..+ .|..+ ..++.+.+....  -+++|+++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDVTD-KYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCTTC-HHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecCCC-HHHHHHHHHHHHHHCCCCCEEE
Confidence            4789999998 8999999999999999 89999998877654432221111 23321 223333333221  24799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99984

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.87  E-value=0.0029  Score=55.85  Aligned_cols=79  Identities=19%  Similarity=0.277  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+. +++... .+  |..+ ..++.+.+.+..  .+++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISK-EADVDAAVEAALSKFGKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHhcCCCC
Confidence            5789999998 8999999999999999 8999999998877653 344332 22  2221 223333333321  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        86 ~li~~Ag~   93 (261)
T 3n74_A           86 ILVNNAGI   93 (261)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.86  E-value=0.0011  Score=57.71  Aligned_cols=101  Identities=16%  Similarity=0.220  Sum_probs=68.4

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce---EeCCCCCCccHHHHHHHHh
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~---~~~~~~~~~~~~~~~~~~~  260 (353)
                      .....++++||.+|+| .|..+..+++.....+|++++.+++..+.+++    .|...   ++..     +..+.+....
T Consensus        49 ~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~~~~~~~~  122 (233)
T 2gpy_A           49 LLKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-----DALQLGEKLE  122 (233)
T ss_dssp             HHHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-----CGGGSHHHHT
T ss_pred             HHhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-----CHHHHHHhcc
Confidence            3445678999999987 68888888888733399999999998887755    35422   2221     1222222222


Q ss_pred             -cCCccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          261 -DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       261 -~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                       .+.||+||.....   ...+..+.+.|+++ |+++...
T Consensus       123 ~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  160 (233)
T 2gpy_A          123 LYPLFDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN  160 (233)
T ss_dssp             TSCCEEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred             cCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence             3489999876553   35567788899997 9998763

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.86  E-value=0.0033  Score=56.25  Aligned_cols=79  Identities=19%  Similarity=0.282  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.|... .+  |..+ ..++.+.+.+..  -+
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQ-PDQVRGMLDQMTGELG  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            5789999997 8999999999999999 899999988776544    3334322 22  3321 223333333321  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.86  E-value=0.0099  Score=52.16  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHHHHHhC--CCce-Ee--CCCCCC-ccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKAKAF--GVTE-FL--NPNDNN-EPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~~--G~~~-~~--~~~~~~-~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+++|+++++++  +..+.+++.  +... .+  |..+ . .++.+.+.+..  -
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV-PVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS-CHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC-ChHHHHHHHHHHHHhc
Confidence            4789999987 89999999999999994488887775  334444332  2211 22  3321 2 23333333321  1


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        83 g~id~lv~~Ag~   94 (254)
T 1sby_A           83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            379999999983

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.86  E-value=0.0031  Score=56.58  Aligned_cols=79  Identities=20%  Similarity=0.255  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceE-e--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+. +++.... +  |..+ ..++.+.+.+..  -+++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRS-LQDQKRAAERCLAAFGKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcCCCC
Confidence            4789999997 8999999999999999 9999999998877654 3543332 2  2221 222333333221  24799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99999884

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.85  E-value=0.0032  Score=55.17  Aligned_cols=79  Identities=15%  Similarity=0.182  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.++.-...+..+-.+.+-.+.+.+. -+++|++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~id~lv~~A   82 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANE-VERLDVLFNVA   82 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHH-CSCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHH-hCCCCEEEECC
Confidence            4789999998 8999999999999999 9999999987766544432112221211122222222222 24799999998


Q ss_pred             CC
Q 018627          272 GD  273 (353)
Q Consensus       272 g~  273 (353)
                      |.
T Consensus        83 g~   84 (246)
T 2ag5_A           83 GF   84 (246)
T ss_dssp             CC
T ss_pred             cc
Confidence            84

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.85  E-value=0.012  Score=53.02  Aligned_cols=41  Identities=17%  Similarity=0.222  Sum_probs=35.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA  234 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~~  234 (353)
                      .++++||+|+ +++|.++++.+...|+ +|++++ +++++.+.+
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~   50 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   50 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHH
Confidence            5788999987 8999999999999999 899998 888766543

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.85  E-value=0.0059  Score=53.42  Aligned_cols=79  Identities=19%  Similarity=0.329  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce--Ee--CCCCCCccHHHHHHHHh-cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE--FL--NPNDNNEPVQQVIKRIT-DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~--~~--~~~~~~~~~~~~~~~~~-~~~~d  265 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++...  .+  |..+ ...+.+.+.... .+++|
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~id   87 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD-AEAMTAAAAEAEAVAPVS   87 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC-HHHHHHHHHHHHhhCCCc
Confidence            5789999998 8999999999999999 899999998876654 3344322  22  3321 222222222211 24799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|+++|.
T Consensus        88 ~li~~Ag~   95 (254)
T 2wsb_A           88 ILVNSAGI   95 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.85  E-value=0.0049  Score=55.47  Aligned_cols=78  Identities=24%  Similarity=0.247  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCce-EeCCCCCCc-cHHHHHHHHhcCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FLNPNDNNE-PVQQVIKRITDGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~-~~~~~~~~~-~~~~~~~~~~~~~~dvv~  268 (353)
                      .|+++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ ++... .+..+-.+. ++.+.+.+.  +++|++|
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv   91 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLI   91 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            5789999998 8999999999999999 99999999988776644 44322 221111122 222222222  4799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus        92 ~nAg~   96 (291)
T 3rd5_A           92 NNAGI   96 (291)
T ss_dssp             ECCCC
T ss_pred             ECCcC
Confidence            99884

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.85  E-value=0.0013  Score=55.99  Aligned_cols=103  Identities=15%  Similarity=0.076  Sum_probs=69.1

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      .+...++++++||-+|+| .|..+..+++. +. +|++++.+++..+.+++    .|...+....   .+..+...  ..
T Consensus        70 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~--~~  141 (210)
T 3lbf_A           70 TELLELTPQSRVLEIGTG-SGYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRH---GDGWQGWQ--AR  141 (210)
T ss_dssp             HHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGCCG--GG
T ss_pred             HHhcCCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEE---CCcccCCc--cC
Confidence            355678899999999987 47777788877 66 99999999998887754    3543221110   11111110  13


Q ss_pred             CCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          262 GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       262 ~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +.||+|+.+.......+...+.|+++ |+++..-..
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~~~  176 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEG-GILVLPVGE  176 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEECS
T ss_pred             CCccEEEEccchhhhhHHHHHhcccC-cEEEEEEcC
Confidence            48999998765545556778999997 998876443

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.84  E-value=0.013  Score=46.03  Aligned_cols=77  Identities=22%  Similarity=0.387  Sum_probs=53.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +.+|+|+|+|.+|..+++.+...|. +|+++++++++.+.+++ +|...+.- +  ..+ .+.+.+..-..+|+|+.+++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~~-d--~~~-~~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVING-D--CTK-IKTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEES-C--TTS-HHHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEEc-C--CCC-HHHHHHcCcccCCEEEEeeC
Confidence            4679999999999999999998998 89999999988877754 56543321 1  111 12233221237999999998


Q ss_pred             ChH
Q 018627          273 DTG  275 (353)
Q Consensus       273 ~~~  275 (353)
                      ...
T Consensus        79 ~~~   81 (140)
T 1lss_A           79 KEE   81 (140)
T ss_dssp             CHH
T ss_pred             Cch
Confidence            753

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.83  E-value=0.0035  Score=56.19  Aligned_cols=81  Identities=21%  Similarity=0.319  Sum_probs=52.5

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--  260 (353)
                      ...++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.|....   .|..+ ..++.+.+.+..  
T Consensus        21 m~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~   98 (279)
T 3sju_A           21 MSRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS-TDEVHAAVAAAVER   98 (279)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            346789999997 8999999999999999 899999998876544    33343322   23321 223333333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++|+++|.
T Consensus        99 ~g~id~lv~nAg~  111 (279)
T 3sju_A           99 FGPIGILVNSAGR  111 (279)
T ss_dssp             HCSCCEEEECCCC
T ss_pred             cCCCcEEEECCCC
Confidence            2479999999884

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.82  E-value=0.001  Score=58.04  Aligned_cols=102  Identities=18%  Similarity=0.150  Sum_probs=70.1

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      .+..++.++++||.+|+| .|..+..+++..+. +|++++.+++..+.+++    .|...+....   .+..   .....
T Consensus        84 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~---~~~~~  155 (235)
T 1jg1_A           84 LEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVIL---GDGS---KGFPP  155 (235)
T ss_dssp             HHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGG---GCCGG
T ss_pred             HHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE---CCcc---cCCCC
Confidence            355678899999999987 68888888888774 99999999988777754    4543321111   1110   11112


Q ss_pred             C-CccEEEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          262 G-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       262 ~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      + +||+|+.+.........+.+.|+++ |+++..-.
T Consensus       156 ~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~~  190 (235)
T 1jg1_A          156 KAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPVG  190 (235)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            2 5999998766545567788999997 98876543

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.82  E-value=0.0084  Score=53.36  Aligned_cols=79  Identities=16%  Similarity=0.229  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++ ++++.+.+    ++.|.... +  |..+ ..++.+.+.+..  .
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ-ESEVEALFAAVIERW  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            5789999987 8999999999999999 8877766 55544433    33444332 2  3321 222333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.81  E-value=0.0092  Score=51.84  Aligned_cols=76  Identities=13%  Similarity=0.159  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhc--CCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITD--GGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~--~~~dvv~  268 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ ..-..++..+-.+.   +.+.+...  +++|++|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~~id~vi   81 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW---DATEKALGGIGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCCH---HHHHHHHHHcCCCCEEE
Confidence            5789999998 9999999999999999 89999999887665533 32122332211122   22333322  3689999


Q ss_pred             eccC
Q 018627          269 ECIG  272 (353)
Q Consensus       269 d~~g  272 (353)
                      +++|
T Consensus        82 ~~Ag   85 (244)
T 1cyd_A           82 NNAA   85 (244)
T ss_dssp             ECCC
T ss_pred             ECCc
Confidence            9988

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.80  E-value=0.01  Score=51.28  Aligned_cols=101  Identities=15%  Similarity=0.150  Sum_probs=67.6

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHh----CCCc--eEeCCCCCCccHHHHHHHH
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVT--EFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~G~~--~~~~~~~~~~~~~~~~~~~  259 (353)
                      ..+.+++.+||-+|+| .|..++.+++.+  +. +|++++.+++..+.+++    .|..  .+-..   ..+..+.+..+
T Consensus        51 ~~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~---~gda~~~l~~~  125 (221)
T 3dr5_A           51 TTNGNGSTGAIAITPA-AGLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFL---LSRPLDVMSRL  125 (221)
T ss_dssp             HSCCTTCCEEEEESTT-HHHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE---CSCHHHHGGGS
T ss_pred             hhCCCCCCCEEEEcCC-chHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEE---EcCHHHHHHHh
Confidence            3344455699988876 688888899886  45 99999999998877744    4544  22111   23333333333


Q ss_pred             hcCCccEEEeccCC---hHHHHHHHHHhccCCceEEEE
Q 018627          260 TDGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       260 ~~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .++.||+||-....   ...++.+.+.|+++ |.++.-
T Consensus       126 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d  162 (221)
T 3dr5_A          126 ANDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLA  162 (221)
T ss_dssp             CTTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEET
T ss_pred             cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEe
Confidence            24589999865432   23577888999997 988864

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.80  E-value=0.0055  Score=53.79  Aligned_cols=75  Identities=21%  Similarity=0.302  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++++.    ++.++..+ .|..+ ..++.+.+.+..  .+++|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDVAD-AAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCTTC-HHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999998 8999999999999999 89998887653    22342222 23321 223333333321  24799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.80  E-value=0.0075  Score=54.28  Aligned_cols=80  Identities=20%  Similarity=0.245  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCC--eEEEEcCChhhHHHHHh-C-----CCce-E--eCCCCCCccHHHHHHHHh
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGAS--RIIGVDTNPEKCEKAKA-F-----GVTE-F--LNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~--~vi~~~~~~~~~~~~~~-~-----G~~~-~--~~~~~~~~~~~~~~~~~~  260 (353)
                      .|+++||+|+ +++|.++++.+...|+.  +|+.+++++++.+.+.+ +     +... .  .|.. +..++.+.+.+..
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~  110 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-QAEKIKPFIENLP  110 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-CGGGHHHHHHTSC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-CHHHHHHHHHHHH
Confidence            5789999998 89999998877666652  88889999887765532 1     3222 1  2333 2344555554432


Q ss_pred             c--CCccEEEeccCC
Q 018627          261 D--GGADYSFECIGD  273 (353)
Q Consensus       261 ~--~~~dvv~d~~g~  273 (353)
                      .  +++|++++++|.
T Consensus       111 ~~~g~iD~lVnnAG~  125 (287)
T 3rku_A          111 QEFKDIDILVNNAGK  125 (287)
T ss_dssp             GGGCSCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCc
Confidence            2  379999999883

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.79  E-value=0.0037  Score=55.51  Aligned_cols=79  Identities=27%  Similarity=0.262  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C-----CCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F-----GVTE-FL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~-----G~~~-~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ +     +... .+  |..+ ..++.+.+.+..  
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~   89 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER   89 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence            5789999998 8999999999999999 89999999877654421 1     3322 22  3321 223333333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++|+++|.
T Consensus        90 ~g~id~lv~nAg~  102 (267)
T 1iy8_A           90 FGRIDGFFNNAGI  102 (267)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2379999999873

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=96.78  E-value=0.00055  Score=58.20  Aligned_cols=135  Identities=16%  Similarity=0.164  Sum_probs=77.9

Q ss_pred             ceeeeEE-EeCCceEECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEc
Q 018627          147 SFSEYTV-VHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       147 ~~a~~~~-~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      .|.+|.. .+....+.+++++++.......  .......+.  ..+.++++||-+|+|. |..+..+++ .+..+|++++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~~l~--~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD   90 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNHQT--TQLAMLGIE--RAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATD   90 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCHHH--HHHHHHHHH--HHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCCcc--HHHHHHHHH--HhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEE
Confidence            5677766 6667788888877665542211  001111111  1267889999999864 666666666 4555999999


Q ss_pred             CChhhHHHHHh----CCCc--eEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh---HHHHHHHHHhccCCceEEEEcC
Q 018627          226 TNPEKCEKAKA----FGVT--EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT---GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       226 ~~~~~~~~~~~----~G~~--~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+++.++.+++    .+..  .++..+  ..+       ...+.||+|+......   ..+..+.+.|+++ |+++....
T Consensus        91 ~s~~~~~~a~~~~~~~~~~~v~~~~~d--~~~-------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  160 (205)
T 3grz_A           91 ISDESMTAAEENAALNGIYDIALQKTS--LLA-------DVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIFSGI  160 (205)
T ss_dssp             SCHHHHHHHHHHHHHTTCCCCEEEESS--TTT-------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEEEEE
T ss_pred             CCHHHHHHHHHHHHHcCCCceEEEecc--ccc-------cCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEEEec
Confidence            99988877755    3433  222211  111       1235899999765432   1234445678897 99988654


Q ss_pred             C
Q 018627          297 P  297 (353)
Q Consensus       297 ~  297 (353)
                      .
T Consensus       161 ~  161 (205)
T 3grz_A          161 D  161 (205)
T ss_dssp             E
T ss_pred             C
Confidence            3

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.78  E-value=0.0045  Score=54.54  Aligned_cols=79  Identities=28%  Similarity=0.324  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-E--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ ++++... .  .|..+ ..++.+.+.+..  -+++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            4789999998 8999999999999999 899999998876654 3344322 1  23321 223333333322  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|+++|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.78  E-value=0.0029  Score=55.87  Aligned_cols=78  Identities=26%  Similarity=0.321  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+    .+... .+  |..+ ..++.+.+.+..  -+
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN-TDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            5789999987 8999999999999999 89999999988766532    23222 22  3321 223333333221  24


Q ss_pred             CccEEEeccC
Q 018627          263 GADYSFECIG  272 (353)
Q Consensus       263 ~~dvv~d~~g  272 (353)
                      ++|++++++|
T Consensus        83 ~id~lv~nAg   92 (257)
T 3imf_A           83 RIDILINNAA   92 (257)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.77  E-value=0.012  Score=53.04  Aligned_cols=75  Identities=20%  Similarity=0.259  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC----ceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV----TEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~----~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      -.++++||+|+|++|.+++..+...|+++|+++.|+.++.+.+ ++++.    ..+....  ..++.+.+.     .+|+
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~--~~~l~~~l~-----~~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD--ARGIEDVIA-----AADG  197 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEEC--STTHHHHHH-----HSSE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcC--HHHHHHHHh-----cCCE
Confidence            4689999999999999999999999997899999999887755 33321    1121111  123444444     3899


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      |++|++.
T Consensus       198 VInaTp~  204 (283)
T 3jyo_A          198 VVNATPM  204 (283)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9999863

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.77  E-value=0.0039  Score=55.15  Aligned_cols=79  Identities=29%  Similarity=0.441  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ +    +... .+  |..+ ..++.+.+.+..  -
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT-PEGVDAVVESVRSSF   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4789999998 8999999999999999 89999999877654322 2    4322 22  3321 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        84 g~id~lv~~Ag~   95 (263)
T 3ai3_A           84 GGADILVNNAGT   95 (263)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.76  E-value=0.0041  Score=55.31  Aligned_cols=79  Identities=22%  Similarity=0.409  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+     ++.|... .+  |..+ ..++.+.+.+..  -
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEKF   97 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5789999998 8999999999999999 899999998776543     2224332 12  3321 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        98 g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 GKLDTVVNAAGI  109 (267)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.76  E-value=0.0023  Score=55.23  Aligned_cols=64  Identities=17%  Similarity=0.257  Sum_probs=45.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .++++||+|+ +++|.++++.+...|+ +|++++++++             .|..+ ..++.+.+.+.  +++|++++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~-~~~v~~~~~~~--g~id~lv~nA   67 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD-EKSVYHYFETI--GAFDHLIVTA   67 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC-HHHHHHHHHHH--CSEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC-HHHHHHHHHHh--CCCCEEEECC
Confidence            4688999998 8999999999988899 8999987655             22221 22333333332  5799999988


Q ss_pred             CC
Q 018627          272 GD  273 (353)
Q Consensus       272 g~  273 (353)
                      |.
T Consensus        68 g~   69 (223)
T 3uce_A           68 GS   69 (223)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.75  E-value=0.0061  Score=52.94  Aligned_cols=98  Identities=19%  Similarity=0.274  Sum_probs=60.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC-ccHHHH---HHHHhc-CCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN-EPVQQV---IKRITD-GGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~---~~~~~~-~~~dv  266 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+     +....+..+-.+ .++.+.   +.+..+ +++|+
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~   75 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   75 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            3578999998 8999999999999999 8999988876532     111122111011 112222   222222 58999


Q ss_pred             EEeccCC--------hH------------------HHHHHHHHhccCCceEEEEcCC
Q 018627          267 SFECIGD--------TG------------------MITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       267 v~d~~g~--------~~------------------~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +++++|.        ..                  ..+.+...++++ |++|.+++.
T Consensus        76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  131 (236)
T 1ooe_A           76 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  131 (236)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC-CEEEEECch
Confidence            9999983        10                  023334455565 899999864

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.75  E-value=0.0043  Score=55.42  Aligned_cols=77  Identities=14%  Similarity=0.133  Sum_probs=51.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCC---ceEe--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGV---TEFL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~---~~~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      +++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.+ +..   ...+  |..+ ..++.+.+....  -+++|
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD   99 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRD-RAAMSAAVDNLPEEFATLR   99 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHTCCGGGSSCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhCCCC
Confidence            78999998 8999999999999999 89999999887765432 221   1122  3321 223333333321  13789


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|+++|.
T Consensus       100 ~lvnnAG~  107 (272)
T 2nwq_A          100 GLINNAGL  107 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.75  E-value=0.0051  Score=54.55  Aligned_cols=80  Identities=19%  Similarity=0.280  Sum_probs=54.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--c
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      -.|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.|.... +  |..+ ..++.+.+.+..  .
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   86 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD-DAQVAHLVDETMKAY   86 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            46889999998 8999999999999999 899999998876654    33343322 2  3321 223333333321  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        87 g~id~lv~nAg~   98 (264)
T 3ucx_A           87 GRVDVVINNAFR   98 (264)
T ss_dssp             SCCSEEEECCCS
T ss_pred             CCCcEEEECCCC
Confidence            479999999864

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.74  E-value=0.009  Score=52.43  Aligned_cols=75  Identities=16%  Similarity=0.172  Sum_probs=51.9

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .-.++++||+|+ |++|.++++.+...|+ +|++++++++..   ++++....+ .+ ...+..+.+....  ++|++|+
T Consensus        16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~-~D-~~~~~~~~~~~~~--~iD~lv~   87 (249)
T 1o5i_A           16 GIRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV-CD-LRKDLDLLFEKVK--EVDILVL   87 (249)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE-CC-TTTCHHHHHHHSC--CCSEEEE
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH---HhhCCeEEE-ee-HHHHHHHHHHHhc--CCCEEEE
Confidence            346889999998 8999999999999999 899998887443   344532233 22 1233443333322  7999999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      ++|.
T Consensus        88 ~Ag~   91 (249)
T 1o5i_A           88 NAGG   91 (249)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.74  E-value=0.0043  Score=55.36  Aligned_cols=79  Identities=20%  Similarity=0.323  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEe---CCCCCCccHHHHHHHH--hcC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFL---NPNDNNEPVQQVIKRI--TDG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~---~~~~~~~~~~~~~~~~--~~~  262 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.|.....   |.. +..++.+.+.+.  ..+
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVT-SESEIIEAFARLDEQGI  102 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-CHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCC-CHHHHHHHHHHHHHHCC
Confidence            5789999987 8999999999999999 999999998876544    334543322   222 122233333322  124


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus       103 ~iD~lv~nAg~  113 (271)
T 4ibo_A          103 DVDILVNNAGI  113 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.74  E-value=0.0045  Score=54.32  Aligned_cols=79  Identities=24%  Similarity=0.293  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.|... .+  |..+ ..++.+.+.+..  -+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD-RQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            4789999998 8999999999999999 8999999987765442    234332 22  3321 223333333221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        84 ~id~lv~nAg~   94 (247)
T 2jah_A           84 GLDILVNNAGI   94 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.74  E-value=0.0052  Score=53.68  Aligned_cols=79  Identities=25%  Similarity=0.361  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+....   .|..+ ..++.+.+.+..  .+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISD-IESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence            4788999998 8999999999999999 899999998776644    33443322   23321 223333333332  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.73  E-value=0.0072  Score=55.10  Aligned_cols=88  Identities=24%  Similarity=0.327  Sum_probs=65.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++.++ +.+.++|+.. .       ++.+.+.     ..|+|+-++.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~-~-------~l~ell~-----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKF-V-------DLETLLK-----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEE-C-------CHHHHHH-----HCSEEEECCC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCccc-c-------CHHHHHh-----hCCEEEEecC
Confidence            57899999999999999999999999 99999988877 5566777642 1       2333333     3789998876


Q ss_pred             ChH----HH-HHHHHHhccCCceEEEEcC
Q 018627          273 DTG----MI-TTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~~----~~-~~~~~~l~~~~G~~v~~g~  296 (353)
                      ...    .+ ...+..++++ ..++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~g-a~lin~ar  233 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKT-AILINTSR  233 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence            422    12 3566788886 88888875

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=96.73  E-value=0.003  Score=53.94  Aligned_cols=104  Identities=18%  Similarity=0.217  Sum_probs=70.0

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      .+...+.++++||.+|+| .|..+..+++..+. .+|++++.+++.++.+++    .|...+....   .+....+.  .
T Consensus        70 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~--~  143 (215)
T 2yxe_A           70 CELLDLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIV---GDGTLGYE--P  143 (215)
T ss_dssp             HHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE---SCGGGCCG--G
T ss_pred             HHhhCCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEE---CCcccCCC--C
Confidence            355678899999999987 58888888888762 299999999988887755    2433221110   11110000  1


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+.||+|+.+.......+.+.+.|+++ |+++..-.
T Consensus       144 ~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  178 (215)
T 2yxe_A          144 LAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPVG  178 (215)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             CCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEEC
Confidence            347999998766544557788999997 99887644

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.73  E-value=0.0046  Score=59.90  Aligned_cols=92  Identities=20%  Similarity=0.267  Sum_probs=70.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -.|++|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|+. +       .++.+.++     ..|+|+-++
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~-~-------~~l~ell~-----~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYR-V-------VTMEYAAD-----KADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCE-E-------CCHHHHTT-----TCSEEEECS
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCE-e-------CCHHHHHh-----cCCEEEECC
Confidence            478999999999999999999999999 999999998875444555653 1       12332222     589999998


Q ss_pred             CChHHH-HHHHHHhccCCceEEEEcCCC
Q 018627          272 GDTGMI-TTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       272 g~~~~~-~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +....+ ...+..|+++ ..++.+|...
T Consensus       341 ~t~~lI~~~~l~~MK~g-AilINvgrg~  367 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHN-AIVCNIGHFD  367 (494)
T ss_dssp             SSSCSBCHHHHHHCCTT-EEEEECSSSS
T ss_pred             CcccccCHHHHhhCCCC-cEEEEcCCCc
Confidence            654444 4677899997 9999998754

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.73  E-value=0.0061  Score=54.62  Aligned_cols=79  Identities=18%  Similarity=0.333  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+    ++.+... .+  |..+ ..++.+.+.+..  .+
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC-HHHHHHHHHHHHHhcC
Confidence            4689999998 8999999999988899 888888887765543    2334332 22  3321 223333333221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|.++|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.73  E-value=0.021  Score=51.24  Aligned_cols=87  Identities=20%  Similarity=0.314  Sum_probs=62.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      .+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...       .+..+.+..     .|+||-|+..+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~~-----aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVVES-----CPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHHH-----CSEEEECCSSH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHhc-----CCEEEEEcCCH
Confidence            478999999999999999999998 99999999999998888775321       233344433     68888888865


Q ss_pred             HHHHHHH-------HHhccCCceEEEEc
Q 018627          275 GMITTAL-------QSCCDGWGLAVTLG  295 (353)
Q Consensus       275 ~~~~~~~-------~~l~~~~G~~v~~g  295 (353)
                      ..+...+       ..++++ ..++..+
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            4444444       445664 5555554

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.73  E-value=0.0062  Score=53.69  Aligned_cols=78  Identities=24%  Similarity=0.300  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe--CCCCCCccHHHHHHHHh--cCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+..++++. ..+  |..+ ..++.+.+.+..  .+++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~-~~~~~~~~~~~~~~~g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLED-ERERVRFVEEAAYALGRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence            4789999998 8999999999999999 89999888877444444432 332  3321 223333333221  2479999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      ++++|.
T Consensus        82 v~~Ag~   87 (256)
T 2d1y_A           82 VNNAAI   87 (256)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.73  E-value=0.0053  Score=53.57  Aligned_cols=81  Identities=17%  Similarity=0.261  Sum_probs=53.4

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCC--ceEe--CCCCCC-ccHHHHHHHHh-
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGV--TEFL--NPNDNN-EPVQQVIKRIT-  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~--~~~~--~~~~~~-~~~~~~~~~~~-  260 (353)
                      -.|+++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+.  ..++  +.+..+ .++.+.+.... 
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            35789999998 8999999999999999 899999998876654    33332  1222  221112 22222222221 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       .+++|++++++|.
T Consensus        91 ~~g~id~lv~nAg~  104 (247)
T 3i1j_A           91 EFGRLDGLLHNASI  104 (247)
T ss_dssp             HHSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             2379999999884

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.73  E-value=0.0075  Score=53.49  Aligned_cols=74  Identities=15%  Similarity=0.240  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++     ...+..+ .|..+ ..++.+.+.+..  -+++|++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDVTN-PDQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCTTC-HHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            4789999998 8999999999999999 89998887665     1112211 23321 223333333221  13799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus        80 ~~Ag~   84 (264)
T 2dtx_A           80 NNAGI   84 (264)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99883

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.72  E-value=0.0038  Score=56.01  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeC-CCCCCc-cHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLN-PNDNNE-PVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~-~~~~~~-~~~~~~~~~~--~~~  263 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+    .+...... .+-.+. ++.+.+....  -++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 8999999999999999 89999999887665532    23332221 111122 2222222221  237


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|+++|.
T Consensus        86 iD~lvnnAg~   95 (280)
T 3tox_A           86 LDTAFNNAGA   95 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.72  E-value=0.0042  Score=54.73  Aligned_cols=79  Identities=18%  Similarity=0.252  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHhc-CC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRITD-GG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~~-~~  263 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.|... .+  |..+ ..++.+.+..... ++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~g~   83 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN-EDEVTAFLNAADAHAP   83 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC-HHHHHHHHHHHHhhCC
Confidence            5789999998 8999999999999999 899999998876544    3334332 22  3321 2222222222211 58


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus        84 id~lv~nAg~   93 (252)
T 3h7a_A           84 LEVTIFNVGA   93 (252)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEECCCc
Confidence            9999999984

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.72  E-value=0.0018  Score=56.74  Aligned_cols=74  Identities=14%  Similarity=0.189  Sum_probs=47.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHH-----HHHhc--CCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVI-----KRITD--GGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-----~~~~~--~~~  264 (353)
                      .++++||+|+ |++|.++++.+.. |. +|+++++++++.+.+.+..-...+..     ++.+..     .+...  +++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~-----D~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC-----CHHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec-----ccchHHHHHHHHHHHHhcCCC
Confidence            4688999998 8999999888765 87 89999999998887766432222211     222111     11111  379


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++++++|.
T Consensus        77 d~lv~~Ag~   85 (245)
T 3e9n_A           77 DTLVHAAAV   85 (245)
T ss_dssp             SEEEECC--
T ss_pred             CEEEECCCc
Confidence            999999885

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.72  E-value=0.0051  Score=53.94  Aligned_cols=79  Identities=25%  Similarity=0.340  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.    +.+... .+  |..+ ..++.+.+.+..  .+
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSD-PESAKAMADRTLAEFG   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 8999999988766542    234322 22  2221 222222332221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999875

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.72  E-value=0.0039  Score=56.80  Aligned_cols=100  Identities=12%  Similarity=0.185  Sum_probs=70.4

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC----CCce---EeCCCCCCccHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE---FLNPNDNNEPVQQVIK  257 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----G~~~---~~~~~~~~~~~~~~~~  257 (353)
                      +.+...+.++++||.+|+|. |..+..+++..|+ +|++++.+++.++.+++.    |...   ++..     ++.    
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~----  150 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-----GWE----  150 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-----CGG----
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-----ChH----
Confidence            34556788999999999875 7788888887788 999999999988877653    4321   2211     111    


Q ss_pred             HHhcCCccEEEec-----cCC---hHHHHHHHHHhccCCceEEEEcCC
Q 018627          258 RITDGGADYSFEC-----IGD---TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       258 ~~~~~~~dvv~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .+ ++.||+|+..     ++.   ...+....+.|+|+ |+++.....
T Consensus       151 ~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  196 (318)
T 2fk8_A          151 DF-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSV  196 (318)
T ss_dssp             GC-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred             HC-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence            11 2579999976     332   34577778899997 999876544

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.72  E-value=0.0078  Score=52.48  Aligned_cols=75  Identities=19%  Similarity=0.291  Sum_probs=48.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC-ccHHHHHH---HHhc-CCcc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN-EPVQQVIK---RITD-GGAD  265 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~---~~~~-~~~d  265 (353)
                      ..++++||+|+ |++|.++++.+...|+ +|+++++++++.+     +....+..+-.+ .++.+.+.   +..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            46789999998 8999999999999999 8999988876532     111122111011 12222222   2222 5799


Q ss_pred             EEEeccC
Q 018627          266 YSFECIG  272 (353)
Q Consensus       266 vv~d~~g  272 (353)
                      ++++++|
T Consensus        79 ~lv~~Ag   85 (241)
T 1dhr_A           79 AILCVAG   85 (241)
T ss_dssp             EEEECCC
T ss_pred             EEEEccc
Confidence            9999988

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.71  E-value=0.0042  Score=55.07  Aligned_cols=79  Identities=19%  Similarity=0.258  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce--Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~--~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.+...  .+  |..+ ..++.+.+.+..  -
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD-RAQCDALAGRAVEEF   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence            5789999987 8999999999999999 999999998876544    3333212  22  3221 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        87 g~id~lvnnAg~   98 (262)
T 3pk0_A           87 GGIDVVCANAGV   98 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999883

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.71  E-value=0.0097  Score=53.39  Aligned_cols=80  Identities=15%  Similarity=0.175  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHH----H-hCCCce-Ee--CCCCC---CccHHHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKA----K-AFGVTE-FL--NPNDN---NEPVQQVIKRI  259 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~----~-~~G~~~-~~--~~~~~---~~~~~~~~~~~  259 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++ ++.+.+    + +.|... .+  |..+.   ..++.+.+...
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            4788999998 8999999999999999 899988887 654433    2 334322 22  32210   12222222222


Q ss_pred             h--cCCccEEEeccCC
Q 018627          260 T--DGGADYSFECIGD  273 (353)
Q Consensus       260 ~--~~~~dvv~d~~g~  273 (353)
                      .  .+++|++|+++|.
T Consensus       101 ~~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            1  2479999999873

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.71  E-value=0.0056  Score=53.88  Aligned_cols=79  Identities=19%  Similarity=0.209  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+    ++.+... .+  |..+ ..++.+.+.+..  -
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4688999998 9999999999999999 8998888 76655433    3334322 22  2221 222333333221  1


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        84 g~id~li~~Ag~   95 (261)
T 1gee_A           84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.70  E-value=0.0048  Score=54.94  Aligned_cols=79  Identities=18%  Similarity=0.299  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceEe--CCCCCCccHHHHHHHHh--cCCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~dv  266 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. ++.....+  |..+ ..++.+.+.+..  -+++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCC-HHHHHHHHHHHHHHcCCCCE
Confidence            5789999998 8999999999999999 8999999988776553 33322222  3221 222333333221  247999


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      +|+++|.
T Consensus        86 lv~nAg~   92 (270)
T 1yde_A           86 VVNNAGH   92 (270)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.69  E-value=0.0042  Score=54.84  Aligned_cols=79  Identities=22%  Similarity=0.291  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+    ++.|.... +  |..+ ..++.+.+.+..  -+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTD-EQHREAVIKAALDQFG   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            5789999987 8999999999989999 899999998876544    33443322 2  3221 222333333221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=96.69  E-value=0.0063  Score=53.88  Aligned_cols=79  Identities=19%  Similarity=0.298  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++ ++++.+.+    ++.+... .+  |..+ ..++.+.+.+..  -
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK-PSEVVALFDKAVSHF   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence            4789999998 8999999999999999 8888887 66655433    3345432 22  3221 223333333221  1


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        98 ~~~d~vi~~Ag~  109 (274)
T 1ja9_A           98 GGLDFVMSNSGM  109 (274)
T ss_dssp             SCEEEEECCCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.68  E-value=0.01  Score=51.85  Aligned_cols=79  Identities=16%  Similarity=0.256  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+    ++.+... .+  |..+ ...+.+.+.+..  .+
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence            5789999998 8999999999999999 899999998765533    3334322 22  2221 222333332221  13


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.68  E-value=0.002  Score=56.06  Aligned_cols=98  Identities=12%  Similarity=0.116  Sum_probs=62.4

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .++|||+|+ |.+|..+++.+...| + +|+++++++++.+.+...++..+ .|..  +.   +.+.+... ++|+||.+
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~~~~Dl~--d~---~~~~~~~~-~~D~vv~~   95 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQIIMGDVL--NH---AALKQAMQ-GQDIVYAN   95 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEEEECCTT--CH---HHHHHHHT-TCSEEEEE
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEEEEecCC--CH---HHHHHHhc-CCCEEEEc
Confidence            367999997 999999999999999 7 89999998877543322222222 1222  21   23333222 58999999


Q ss_pred             cCChHH---HHHHHHHhccC-CceEEEEcCCC
Q 018627          271 IGDTGM---ITTALQSCCDG-WGLAVTLGVPK  298 (353)
Q Consensus       271 ~g~~~~---~~~~~~~l~~~-~G~~v~~g~~~  298 (353)
                      ++....   ....++.++.. .++||.++...
T Consensus        96 a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           96 LTGEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             CCSTTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCCCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            886432   23344444442 26899888744

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.68  E-value=0.0065  Score=53.52  Aligned_cols=78  Identities=18%  Similarity=0.315  Sum_probs=50.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCC--CCeEEEEcCChhhHHHHHh-CCCceE-e--CCCCCCccHHHHHHHHh--cCCc
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTNPEKCEKAKA-FGVTEF-L--NPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g--~~~vi~~~~~~~~~~~~~~-~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      |+++||+|+ +++|.++++.+...|  + +|+.+++++++.+.+.+ +|.... +  |..+ ..++.+.+.+..  .+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITE-DSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHhcCCc
Confidence            578999997 899999988776664  5 88889999888776643 443221 2  3321 222333333221  2479


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++++++|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999999884

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.67  E-value=0.0087  Score=54.69  Aligned_cols=88  Identities=20%  Similarity=0.286  Sum_probs=64.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|+ +|++.+++.++. .++++|+.. .       ++.+.+.     ..|+|+.++.
T Consensus       141 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~-~-------~l~ell~-----~aDvVvl~~P  205 (313)
T 2ekl_A          141 AGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA-V-------SLEELLK-----NSDVISLHVT  205 (313)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE-C-------CHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee-c-------CHHHHHh-----hCCEEEEecc
Confidence            57899999999999999999999999 999999888765 456677642 1       2333333     3788888876


Q ss_pred             ChH----HH-HHHHHHhccCCceEEEEcC
Q 018627          273 DTG----MI-TTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~~----~~-~~~~~~l~~~~G~~v~~g~  296 (353)
                      ...    .+ ...+..++++ +.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~g-a~lIn~ar  233 (313)
T 2ekl_A          206 VSKDAKPIIDYPQFELMKDN-VIIVNTSR  233 (313)
T ss_dssp             CCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred             CChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence            422    12 4566788886 88888765

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.66  E-value=0.0053  Score=55.45  Aligned_cols=101  Identities=14%  Similarity=0.136  Sum_probs=71.6

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce---EeCCCCCCccHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIK  257 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~---~~~~~~~~~~~~~~~~  257 (353)
                      +.+..+++++++||-+|+|. |..+..+++..|. +|++++.+++.++.+++    .|...   ++..     ++.    
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-----d~~----  132 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-----GWE----  132 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-----CGG----
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-----CHH----
Confidence            44666789999999999874 8888888888787 99999999998887754    34331   2211     111    


Q ss_pred             HHhcCCccEEEeccCC---------------hHHHHHHHHHhccCCceEEEEcCCC
Q 018627          258 RITDGGADYSFECIGD---------------TGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .+ ++.||+|+....-               ...+....+.|+|+ |+++......
T Consensus       133 ~~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~  186 (302)
T 3hem_A          133 EF-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTITI  186 (302)
T ss_dssp             GC-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEEC
T ss_pred             Hc-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEec
Confidence            11 4589999874321               25577888899997 9999876543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.65  E-value=0.0083  Score=51.93  Aligned_cols=78  Identities=22%  Similarity=0.250  Sum_probs=51.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-----hCCCceE-e--CCCCCCccHHHHHHHHh--cC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-----AFGVTEF-L--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-----~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      ++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+.     +.+.... +  |..+ ..++.+.+.+..  .+
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK-AESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHCC-HHHHHS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC-HHHHHHHHHHHHHhcC
Confidence            678999997 8999999999999999 8999999988766442     2343322 2  3221 122222221111  13


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus        80 ~id~li~~Ag~   90 (235)
T 3l77_A           80 DVDVVVANAGL   90 (235)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999884

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.65  E-value=0.0027  Score=55.90  Aligned_cols=103  Identities=16%  Similarity=0.210  Sum_probs=68.6

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc-CC
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD-GG  263 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~-~~  263 (353)
                      ...++++||-+|+| .|..+..+++..+ ..+|++++.+++.++.+++    .|...-+...  ..+..+.+..... +.
T Consensus        60 ~~~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~--~~d~~~~l~~~~~~~~  136 (248)
T 3tfw_A           60 RLTQAKRILEIGTL-GGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLR--EGPALQSLESLGECPA  136 (248)
T ss_dssp             HHHTCSEEEEECCT-TSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHTCCSCCC
T ss_pred             hhcCCCEEEEecCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHhcCCCCC
Confidence            45678999999986 4777888888874 3499999999998887754    3544211111  2334444444332 38


Q ss_pred             ccEEEeccCC---hHHHHHHHHHhccCCceEEEEcC
Q 018627          264 ADYSFECIGD---TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       264 ~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ||+||-....   ...++.+.+.|+++ |.++.-..
T Consensus       137 fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          137 FDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             eEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            9999843322   34577888999997 98886543

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.64  E-value=0.0047  Score=55.29  Aligned_cols=79  Identities=25%  Similarity=0.444  Sum_probs=53.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCc--e--Ee--CCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT--E--FL--NPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~--~--~~--~~~~~~~~~~~~~~~~~-  260 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+..  .  .+  |..+ ..++.+.+.+.. 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   87 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN-EDETARAVDAVTA   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC-HHHHHHHHHHHHH
Confidence            5789999987 8999999999999999 899999998776543    334431  1  12  3321 223333333321 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       .+++|++++++|.
T Consensus        88 ~~g~id~lv~nAg~  101 (281)
T 3svt_A           88 WHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCCCEEEECCCc
Confidence             2479999999984

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.64  E-value=0.0068  Score=54.16  Aligned_cols=79  Identities=22%  Similarity=0.241  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhhHH----HHHhCCCceE-e--CCCCCCccH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCE----KAKAFGVTEF-L--NPNDNNEPV  252 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~------------~~~~~----~~~~~G~~~~-~--~~~~~~~~~  252 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++            .++.+    .+++.|.... +  |..+ ..++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v   86 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD-RAAL   86 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHH
Confidence            5789999987 8999999999999999 89999886            33332    2344554332 2  3321 2233


Q ss_pred             HHHHHHHh--cCCccEEEeccCC
Q 018627          253 QQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       253 ~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      .+.+.+..  -+++|++++++|.
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHHHhcCCCCEEEECCCC
Confidence            33333221  2479999999884

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.64  E-value=0.0094  Score=51.87  Aligned_cols=79  Identities=23%  Similarity=0.284  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++ .+++++.+.+    ++.+... .+  |..+ ...+.+.+.+..  .
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN-PEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHhc
Confidence            4688999998 8999999999999999 88888 6665554432    3344332 22  3221 222333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        82 ~~~d~vi~~Ag~   93 (247)
T 2hq1_A           82 GRIDILVNNAGI   93 (247)
T ss_dssp             SCCCEEEECC--
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.64  E-value=0.0054  Score=54.82  Aligned_cols=79  Identities=15%  Similarity=0.253  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.|... .+  |..+ ..++.+.+.+..  -+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            4789999998 8999999999999999 899999998776543    3335332 22  3321 222333333221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        99 ~iD~lv~~Ag~  109 (277)
T 2rhc_B           99 PVDVLVNNAGR  109 (277)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.63  E-value=0.0046  Score=55.30  Aligned_cols=80  Identities=18%  Similarity=0.321  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-h---CCCceEeCCCCCC-ccHHHHHHHHh--cCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A---FGVTEFLNPNDNN-EPVQQVIKRIT--DGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~---~G~~~~~~~~~~~-~~~~~~~~~~~--~~~~  264 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +   .|-...+..+-.+ .++.+.+.+..  .+++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5789999998 8999999999999999 8999999987765442 2   2311122111112 22222233221  2479


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++|+++|.
T Consensus       107 D~lvnnAg~  115 (276)
T 2b4q_A          107 DILVNNAGT  115 (276)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.63  E-value=0.0043  Score=57.57  Aligned_cols=79  Identities=23%  Similarity=0.357  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-----------HHHHHhCCCceE---eCCCCCCccHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-----------CEKAKAFGVTEF---LNPNDNNEPVQQVIK  257 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-----------~~~~~~~G~~~~---~~~~~~~~~~~~~~~  257 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++           .+.+++.|....   .|..+ ..++.+.+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~  121 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD-EQQISAAVE  121 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHH
Confidence            5899999998 8999999999999999 89998888763           233455554332   23331 223333333


Q ss_pred             HHh--cCCccEEEeccCC
Q 018627          258 RIT--DGGADYSFECIGD  273 (353)
Q Consensus       258 ~~~--~~~~dvv~d~~g~  273 (353)
                      +..  .+++|++|+++|.
T Consensus       122 ~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            322  2489999999984

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.62  E-value=0.0045  Score=53.36  Aligned_cols=103  Identities=16%  Similarity=0.182  Sum_probs=68.9

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc--
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~--  261 (353)
                      .+..++++||-+|+| .|..++.+++..+ ..+|++++.+++..+.+++    .|....+...  ..+..+.+..+..  
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~--~~d~~~~~~~~~~~~  141 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLR--LKPALETLDELLAAG  141 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHHTT
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEE--EcCHHHHHHHHHhcC
Confidence            445678999999987 7888888888763 3499999999988877754    3542111111  1233344433322  


Q ss_pred             --CCccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          262 --GGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       262 --~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                        +.||+||-....   ...+..+.+.++++ |.++...
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~  179 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR  179 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEC
Confidence              579998865433   24578888999997 9988754

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.62  E-value=0.016  Score=51.14  Aligned_cols=79  Identities=22%  Similarity=0.350  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-C-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce--Ee--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-G-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--FL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~--~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ | ++|.++++.+...|+ +|+++++++++.+.+.    +.+...  .+  |..+ ..++.+.+.+..  
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~   98 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTS-TEAVDALITQTVEK   98 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCC-HHHHHHHHHHHHHH
Confidence            5789999998 6 799999999999999 8999999988765442    233222  22  3221 223333333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      .+++|++|+++|.
T Consensus        99 ~g~id~li~~Ag~  111 (266)
T 3o38_A           99 AGRLDVLVNNAGL  111 (266)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             hCCCcEEEECCCc
Confidence            2379999999984

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.62  E-value=0.0093  Score=52.58  Aligned_cols=74  Identities=22%  Similarity=0.266  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.     +..+ .|..+ ..++.+.+....  .+++|++|
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~~Dl~d-~~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----FLAVKCDITD-TEQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----SEEEECCTTS-HHHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----ceEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence            4688999998 8999999999999999 89998887765432     1111 23321 223333333221  24789999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus        93 ~nAg~   97 (253)
T 2nm0_A           93 ANAGV   97 (253)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            99874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.62  E-value=0.0072  Score=53.35  Aligned_cols=79  Identities=14%  Similarity=0.222  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHH---Hhc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKR---ITD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~---~~~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.|... .+  |..+ ..++.+.+.+   ..+
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   85 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH   85 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 899999998776543    2234322 12  3321 2223222222   222


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        86 g~id~lv~~Ag~   97 (260)
T 2ae2_A           86 GKLNILVNNAGI   97 (260)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999883

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.61  E-value=0.0038  Score=54.77  Aligned_cols=75  Identities=17%  Similarity=0.250  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh--cCCccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT--DGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~dvv~d  269 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.  +  ...|..+ ..++.+.+.+..  .+++|++|+
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~-~~~~~~~~~~~~~~~g~id~lv~   87 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS   87 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence            4788999998 8999999999999999 8999988876543221  1  1223331 222333333221  247999999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      ++|.
T Consensus        88 ~Ag~   91 (247)
T 1uzm_A           88 NAGL   91 (247)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9884

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.61  E-value=0.0061  Score=54.73  Aligned_cols=79  Identities=16%  Similarity=0.225  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.+    .|... .+  |..+ ..++.+.+.+..  .+
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD-ELQMRNAVRDLVLKFG  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            5789999997 8999999999999999 99999999887665432    23322 22  3221 223333333321  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.61  E-value=0.014  Score=51.05  Aligned_cols=79  Identities=27%  Similarity=0.332  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+    ++.|.... +  |..+ ..++.+.+.+..  .
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD-ADEVKAMIKEVVSQF   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            4688999987 8999999999999999 7777655 54544433    34454332 2  2221 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999884

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.60  E-value=0.01  Score=52.69  Aligned_cols=75  Identities=15%  Similarity=0.126  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh--cCCccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT--DGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~dvv~d  269 (353)
                      .|+++||+|+ +++|++.++.+...|+ +|+.+++++++. ..+++.  ...|..+ ..+....+....  -+++|++++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-~~~~~~--~~~Dv~~-~~~v~~~~~~~~~~~G~iDilVn   84 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-LPEELF--VEADLTT-KEGCAIVAEATRQRLGGVDVIVH   84 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-SCTTTE--EECCTTS-HHHHHHHHHHHHHHTSSCSEEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-CCcEEE--EEcCCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence            7899999987 8999999999999999 899998875431 111110  1123221 223333333221  247999999


Q ss_pred             ccC
Q 018627          270 CIG  272 (353)
Q Consensus       270 ~~g  272 (353)
                      ++|
T Consensus        85 nAG   87 (261)
T 4h15_A           85 MLG   87 (261)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            887

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.60  E-value=0.0069  Score=54.06  Aligned_cols=80  Identities=18%  Similarity=0.153  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh---CCCce-EeCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVTE-FLNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---~G~~~-~~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++++..+.+++   .+... .+..+-.+.+-.+.+.+..  .+++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            5789999997 8999999999999999 89888876554444433   34322 2211111222222222211  24899


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|+++|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.60  E-value=0.0095  Score=51.71  Aligned_cols=78  Identities=22%  Similarity=0.225  Sum_probs=50.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHH----HhCCCce-E-e--CCCCCCccHHHHHHHHh--c
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTE-F-L--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~G~~~-~-~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      ++++||+|+ |++|..+++.+...|+ +|+++ ++++++.+.+    ++.+... . +  |..+ ...+.+.+.+..  -
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE-AEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCC-HHHHHHHHHHHHHhc
Confidence            467999998 8999999999999999 88887 8887766543    2334322 1 2  3321 222222322221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        79 ~~~d~li~~Ag~   90 (245)
T 2ph3_A           79 GGLDTLVNNAGI   90 (245)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.60  E-value=0.014  Score=51.46  Aligned_cols=96  Identities=25%  Similarity=0.402  Sum_probs=65.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc-eEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~-~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      +.++++||-+|+|. |..++.+++ .|. +|++++.++...+.+++    .+.. .++     ..++.+.   +..+.||
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~-----~~d~~~~---~~~~~fD  186 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFL-----EGSLEAA---LPFGPFD  186 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEE-----ESCHHHH---GGGCCEE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEE-----ECChhhc---CcCCCCC
Confidence            67899999999864 666666555 588 99999999998877755    3432 122     1233322   2245899


Q ss_pred             EEEeccCC---hHHHHHHHHHhccCCceEEEEcCCC
Q 018627          266 YSFECIGD---TGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       266 vv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|+.+...   ...+....+.++++ |+++..+...
T Consensus       187 ~Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~~~  221 (254)
T 2nxc_A          187 LLVANLYAELHAALAPRYREALVPG-GRALLTGILK  221 (254)
T ss_dssp             EEEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEEG
T ss_pred             EEEECCcHHHHHHHHHHHHHHcCCC-CEEEEEeecc
Confidence            99976432   24567777889997 9999987543

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.59  E-value=0.0041  Score=55.66  Aligned_cols=79  Identities=22%  Similarity=0.268  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCC---c-eEe--CCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV---T-EFL--NPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~---~-~~~--~~~~~~~~~~~~~~~~~-  260 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.+.   . ..+  |..+ ..++.+.+.+.. 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   82 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK   82 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC-HHHHHHHHHHHHH
Confidence            5788999987 8999999999999999 8999999987765442    2232   1 122  3321 222333333221 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++|+++|.
T Consensus        83 ~~g~iD~lv~nAg~   96 (280)
T 1xkq_A           83 QFGKIDVLVNNAGA   96 (280)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence             2379999999873

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.59  E-value=0.0081  Score=53.48  Aligned_cols=79  Identities=16%  Similarity=0.282  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHH---HHhc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIK---RITD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~---~~~~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.|... .+  |..+ ..++.+.+.   +..+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   97 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD   97 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 899999998776543    2334332 22  3221 222222222   2222


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        98 g~id~lv~nAg~  109 (273)
T 1ae1_A           98 GKLNILVNNAGV  109 (273)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            689999999884

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.58  E-value=0.0045  Score=52.08  Aligned_cols=97  Identities=13%  Similarity=0.158  Sum_probs=59.2

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      ++|||+|+ |.+|..+++.+...|. +|+++++++++.+.+...+.. ++..+  -.+ .+.+.+... ++|+||.+++.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~D--~~~-~~~~~~~~~-~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGD--VLQ-AADVDKTVA-GQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESC--TTS-HHHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCceE-EEEec--CCC-HHHHHHHHc-CCCEEEECccC
Confidence            68999998 9999999999999998 999999988765322111222 22121  111 123333322 58999999885


Q ss_pred             hH----------HHHHHHHHhcc-CCceEEEEcCC
Q 018627          274 TG----------MITTALQSCCD-GWGLAVTLGVP  297 (353)
Q Consensus       274 ~~----------~~~~~~~~l~~-~~G~~v~~g~~  297 (353)
                      ..          .....++.+.. +.++++.++..
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            32          12333333333 12688888754

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.58  E-value=0.0089  Score=51.93  Aligned_cols=78  Identities=18%  Similarity=0.290  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEE-EcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~-~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      |+++||+|+ |++|..+++.+...|+ +|++ ..+++++.+.+    ++.+... .+  |..+ ..++.+.+.+..  -+
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence            568999998 8999999999999999 7877 57887765543    2234322 12  3221 223333333221  23


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        79 ~id~li~~Ag~   89 (244)
T 1edo_A           79 TIDVVVNNAGI   89 (244)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.58  E-value=0.0053  Score=54.10  Aligned_cols=79  Identities=19%  Similarity=0.361  Sum_probs=48.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ ++++... .+  |..+ ..++.+.+.+..  -+++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTN-EADATAALAFAKQEFGHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence            5789999998 8999999999999999 899998888776544 3344221 22  3221 223333333221  23799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.58  E-value=0.0077  Score=54.46  Aligned_cols=79  Identities=23%  Similarity=0.278  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhhHHH----HHhCCCceE---eCCCCCCccH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCEK----AKAFGVTEF---LNPNDNNEPV  252 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~------------~~~~~~----~~~~G~~~~---~~~~~~~~~~  252 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++            .++++.    +++.|....   .|..+ ..++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v  104 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD-FDAM  104 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHH
Confidence            5789999998 8999999999999999 89988876            444332    344554332   23321 2223


Q ss_pred             HHHHHHHh--cCCccEEEeccCC
Q 018627          253 QQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       253 ~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      .+.+.+..  -+++|++|+++|.
T Consensus       105 ~~~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          105 QAAVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHhCCCCEEEECCCC
Confidence            33333221  2479999999873

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.58  E-value=0.013  Score=54.63  Aligned_cols=94  Identities=17%  Similarity=0.147  Sum_probs=66.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      .+|+|+|+|.+|..+++.+.. .. .|.+.+++.++++.+++......+|..  +   .+.+.++.. +.|+|++|++..
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~--d---~~~l~~~~~-~~DvVi~~~p~~   88 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDAS--N---FDKLVEVMK-EFELVIGALPGF   88 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTT--C---HHHHHHHHT-TCSEEEECCCGG
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecC--C---HHHHHHHHh-CCCEEEEecCCc
Confidence            479999999999998887754 45 888889999999888765322233332  1   223333332 589999999876


Q ss_pred             HHHHHHHHHhccCCceEEEEcCC
Q 018627          275 GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       275 ~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ....-+-.++..+ -+++++...
T Consensus        89 ~~~~v~~~~~~~g-~~yvD~s~~  110 (365)
T 3abi_A           89 LGFKSIKAAIKSK-VDMVDVSFM  110 (365)
T ss_dssp             GHHHHHHHHHHHT-CEEEECCCC
T ss_pred             ccchHHHHHHhcC-cceEeeecc
Confidence            5566666778886 889887643

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.57  E-value=0.0051  Score=59.36  Aligned_cols=94  Identities=23%  Similarity=0.369  Sum_probs=70.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .-.|++|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|+. +       .++.+.+     ...|+|+-+
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~-------~~l~ell-----~~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-V-------VTLDEIV-----DKGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-E-------CCHHHHT-----TTCSEEEEC
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-e-------cCHHHHH-----hcCCEEEEC
Confidence            3478999999999999999999999999 999999998876455566652 1       1232222     258999998


Q ss_pred             cCChHHH-HHHHHHhccCCceEEEEcCCCC
Q 018627          271 IGDTGMI-TTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       271 ~g~~~~~-~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      .+....+ ...+..|+++ ..++.+|....
T Consensus       320 ~~t~~lI~~~~l~~MK~g-ailiNvgrg~~  348 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNN-AVVGNIGHFDD  348 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTT-CEEEECSSTTT
T ss_pred             CChhhhcCHHHHhhcCCC-cEEEEeCCCCc
Confidence            7654444 4666889997 99999987543

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.57  E-value=0.0052  Score=54.24  Aligned_cols=35  Identities=29%  Similarity=0.440  Sum_probs=32.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +.+|+|+|+|++|..+++.+...|.++++.++.+.
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            57899999999999999999999998999999887

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.56  E-value=0.024  Score=50.92  Aligned_cols=88  Identities=16%  Similarity=0.283  Sum_probs=63.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      .+|.|+|+|.+|...+..+...|. +|++.++++++.+.+++.|...   .    .++.+.+.     ..|+||.|++.+
T Consensus         6 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~D~vi~~v~~~   72 (299)
T 1vpd_A            6 MKVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIAE-----QCDVIITMLPNS   72 (299)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHHH-----HCSEEEECCSSH
T ss_pred             ceEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh-----CCCEEEEECCCH
Confidence            379999999999999998888898 8999999999988888777432   1    22333333     389999999865


Q ss_pred             HHHHHHH-------HHhccCCceEEEEcC
Q 018627          275 GMITTAL-------QSCCDGWGLAVTLGV  296 (353)
Q Consensus       275 ~~~~~~~-------~~l~~~~G~~v~~g~  296 (353)
                      ..+...+       ..++++ ..++.++.
T Consensus        73 ~~~~~~~~~~~~l~~~l~~~-~~vv~~s~  100 (299)
T 1vpd_A           73 PHVKEVALGENGIIEGAKPG-TVLIDMSS  100 (299)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECSC
T ss_pred             HHHHHHHhCcchHhhcCCCC-CEEEECCC
Confidence            5555444       456664 66666643

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.56  E-value=0.0065  Score=54.10  Aligned_cols=78  Identities=28%  Similarity=0.346  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..++..+...|+ +|+++++++++.+.+    ++.+... .+  |..+ ..++.+.+....  -+
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISD-PKSVEETISQQEKDFG  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCC-HHHHHHHHHHHHHHhC
Confidence            4789999997 8999999998888899 899998887655433    2234322 22  3221 222333333221  13


Q ss_pred             CccEEEeccC
Q 018627          263 GADYSFECIG  272 (353)
Q Consensus       263 ~~dvv~d~~g  272 (353)
                      .+|++|+++|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            7999999887

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.56  E-value=0.0072  Score=53.46  Aligned_cols=79  Identities=16%  Similarity=0.208  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCc-eE--eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVT-EF--LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~-~~--~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ +++... ..  .|..+ ..++.+.+.+..  -+++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            5789999998 8999999999999999 899999998876654 333321 12  23321 223333333221  13799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|+++|.
T Consensus        84 ~lv~~Ag~   91 (260)
T 1nff_A           84 VLVNNAGI   91 (260)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.55  E-value=0.0071  Score=53.63  Aligned_cols=79  Identities=18%  Similarity=0.143  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----h-CCCc-e-E--eCCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----A-FGVT-E-F--LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~-~G~~-~-~--~~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++.+.+.    + .+.. . .  .|..+ ..+..+.+.+..  
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD-ALQVRAFAEACERT   84 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC-HHHHHHHHHHHHHH
Confidence            5789999987 8999999999999999 8999999988765442    2 3332 1 2  23321 222323333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++++++|.
T Consensus        85 ~g~id~lvnnAg~   97 (265)
T 3lf2_A           85 LGCASILVNNAGQ   97 (265)
T ss_dssp             HCSCSEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence            2479999999984

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.55  E-value=0.0082  Score=51.47  Aligned_cols=97  Identities=18%  Similarity=0.235  Sum_probs=60.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      .+|||+|+ |.+|..+++.+...|. +|+++++++++.+.+.  ....++..+  -.+ .+.+.+... ++|+||.++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~D--l~d-~~~~~~~~~-~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN--EHLKVKKAD--VSS-LDEVCEVCK-GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC--TTEEEECCC--TTC-HHHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc--CceEEEEec--CCC-HHHHHHHhc-CCCEEEEeCcC
Confidence            68999998 8899999999999998 9999999987653221  111222222  111 123333332 59999999886


Q ss_pred             h-----------HHHHHHHHHhccC-CceEEEEcCCC
Q 018627          274 T-----------GMITTALQSCCDG-WGLAVTLGVPK  298 (353)
Q Consensus       274 ~-----------~~~~~~~~~l~~~-~G~~v~~g~~~  298 (353)
                      .           ......++.++.. -+++|.++...
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            3           1223344444443 14899888644

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.55  E-value=0.016  Score=52.88  Aligned_cols=75  Identities=17%  Similarity=0.222  Sum_probs=51.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC---hhhHHHHH-h----CCCc-eEeCCCCCCccHHHHHHHHhcCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---PEKCEKAK-A----FGVT-EFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~---~~~~~~~~-~----~G~~-~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      .++++||+|+|++|.+++..+...|+++|+++.|+   .++.+.+. +    ++.. ..+++.+ ..++.+.+.     .
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~-~~~l~~~l~-----~  226 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED-HEQLRKEIA-----E  226 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHHH-----T
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch-HHHHHhhhc-----C
Confidence            68999999999999999999999999889999898   66665442 2    3322 2333321 112222222     4


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|+||+|++.
T Consensus       227 aDiIINaTp~  236 (315)
T 3tnl_A          227 SVIFTNATGV  236 (315)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECccC
Confidence            9999999863

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.55  E-value=0.0051  Score=53.59  Aligned_cols=79  Identities=20%  Similarity=0.327  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+     .+... .+  |..+ ..++.+.+.+..  .
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS-EESINKAFEEIYNLV   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC-HHHHHHHHHHHHHhc
Confidence            4788999998 8999999999999999 89999998877654422     24322 22  3221 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        84 ~~~d~vi~~Ag~   95 (248)
T 2pnf_A           84 DGIDILVNNAGI   95 (248)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.54  E-value=0.0065  Score=53.55  Aligned_cols=79  Identities=27%  Similarity=0.347  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-Ee--CCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .++++||+|+ |++|..+++.+...|+ +|++++++.++.+.+ ++++... .+  |..+ ..++.+.+.+..  .+++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS-EKDVQTALALAKGKFGRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHCCCCC
Confidence            5789999998 8999999999999999 899998888776544 3344322 22  3221 223333333221  13799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++|+++|.
T Consensus        89 ~li~~Ag~   96 (265)
T 2o23_A           89 VAVNCAGI   96 (265)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99999873

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.54  E-value=0.0057  Score=54.69  Aligned_cols=97  Identities=14%  Similarity=0.029  Sum_probs=63.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +|||+|+ |.+|..+++.+... |. +|+++.++.++.+.+...++..+ .|..  +.   +.+.+.. .++|+||.+++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~~~D~~--d~---~~l~~~~-~~~d~vi~~a~   74 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVRQLDYF--NQ---ESMVEAF-KGMDTVVFIPS   74 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEEECCTT--CH---HHHHHHT-TTCSEEEECCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEEEcCCC--CH---HHHHHHH-hCCCEEEEeCC
Confidence            5899998 99999999998887 88 89898898887655544454332 2332  21   2333333 26999999987


Q ss_pred             Ch-------HHHHHHHHHhccC-CceEEEEcCCCC
Q 018627          273 DT-------GMITTALQSCCDG-WGLAVTLGVPKL  299 (353)
Q Consensus       273 ~~-------~~~~~~~~~l~~~-~G~~v~~g~~~~  299 (353)
                      ..       ......++.++.. -+++|.++....
T Consensus        75 ~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~  109 (289)
T 3e48_A           75 IIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD  109 (289)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred             CCccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC
Confidence            52       2233444555543 148888887554

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.53  E-value=0.0075  Score=52.97  Aligned_cols=78  Identities=23%  Similarity=0.412  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+    ++.+... .+  |..+ ..++.+.+.+..  .+
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTN-TESVQNAVRSVHEQEG   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 9999999999999999 899999988765433    3334322 22  3221 222333333221  13


Q ss_pred             CccEEEeccC
Q 018627          263 GADYSFECIG  272 (353)
Q Consensus       263 ~~dvv~d~~g  272 (353)
                      ++|++|+++|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.51  E-value=0.00089  Score=58.59  Aligned_cols=98  Identities=15%  Similarity=0.156  Sum_probs=66.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc----eEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT----EFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~----~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      ..+|.+||-+|+| .|..+..+++..+. ++++++.+++-++.+++....    ..+.    ..++.+.+..+..+.||.
T Consensus        58 ~~~G~rVLdiG~G-~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~----~~~a~~~~~~~~~~~FD~  131 (236)
T 3orh_A           58 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL----KGLWEDVAPTLPDGHFDG  131 (236)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE----ESCHHHHGGGSCTTCEEE
T ss_pred             ccCCCeEEEECCC-ccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEE----eehHHhhcccccccCCce
Confidence            4689999999986 57777788877666 899999999998888764321    1111    123333333444458997


Q ss_pred             E-EeccCC----------hHHHHHHHHHhccCCceEEEEc
Q 018627          267 S-FECIGD----------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       267 v-~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      | +|++..          ...+..+.+.|+|+ |+++.+.
T Consensus       132 i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EEEeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence            7 555432          13456778899997 9998764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.51  E-value=0.0065  Score=54.91  Aligned_cols=79  Identities=15%  Similarity=0.213  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce--Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~--~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.+...  .+  |..+ ..++.+.+.+..  .
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD-PGSCADAARTVVDAF  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCC-HHHHHHHHHHHHHHc
Confidence            5789999988 8999999999999999 9999999987765442    233112  22  3321 222333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.50  E-value=0.027  Score=51.14  Aligned_cols=75  Identities=20%  Similarity=0.356  Sum_probs=56.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      -.+|.|+|.|.+|..+++.+...|. +|++.++++++.+.+.+.|+...       .+..+.+..     .|+||-|++.
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~~~-----aDvvi~~vp~   87 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVIKK-----CKYTIAMLSD   87 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHHHH-----CSEEEECCSS
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHHHh-----CCEEEEEcCC
Confidence            4689999999999999999999998 99999999999998888876421       223333332     6888888876


Q ss_pred             hHHHHHHH
Q 018627          274 TGMITTAL  281 (353)
Q Consensus       274 ~~~~~~~~  281 (353)
                      +..+...+
T Consensus        88 ~~~~~~v~   95 (310)
T 3doj_A           88 PCAALSVV   95 (310)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            54444444

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.50  E-value=0.0091  Score=51.33  Aligned_cols=102  Identities=13%  Similarity=0.063  Sum_probs=68.5

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCC-----CCeEEEEcCChhhHHHHHhC----C-----Cc--eEeCCCCCCccHH
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARG-----ASRIIGVDTNPEKCEKAKAF----G-----VT--EFLNPNDNNEPVQ  253 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g-----~~~vi~~~~~~~~~~~~~~~----G-----~~--~~~~~~~~~~~~~  253 (353)
                      .++++++||-+|+|. |..+..+++..+     ..+|++++.+++..+.+++.    +     ..  .++..+. ...+.
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~  154 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI-YQVNE  154 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG-GGCCH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh-Hhccc
Confidence            578899999999875 788888888775     12899999999888777542    3     11  1221110 11110


Q ss_pred             HHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          254 QVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       254 ~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +..  ...+.||+|+........+..+.+.|+++ |+++..-.
T Consensus       155 ~~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  194 (227)
T 2pbf_A          155 EEK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPIE  194 (227)
T ss_dssp             HHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEEE
T ss_pred             ccC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEc
Confidence            000  11347999998776656678888999997 99887643

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.49  E-value=0.0071  Score=50.96  Aligned_cols=62  Identities=16%  Similarity=0.387  Sum_probs=43.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      ++||+|+ |.+|..+++.+. .|+ +|++++++++          ....|..+ ...+.+.+...  +++|++|+++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~-~~~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN-IDSIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC-HHHHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC-HHHHHHHHHHh--CCCCEEEECCC
Confidence            7999998 899999999888 898 8999988764          11223321 22333333332  47899999987

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.49  E-value=0.014  Score=53.80  Aligned_cols=135  Identities=13%  Similarity=0.115  Sum_probs=81.5

Q ss_pred             CEEEEEcCChHHHHHHHHHH-HC-CCCeEEEEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          195 STVVIFGLGTVGLSVAQGAK-AR-GASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~-~~-g~~~vi~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -+|.|+|+|.+|...++.++ .. +++.+.+.++++++.+.+ +++|+..+..      ++.+.+.   ...+|+|+.|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~------~~~~~l~---~~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT------NYKDMID---TENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES------CHHHHHT---TSCCSEEEECS
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC------CHHHHhc---CCCCCEEEEeC
Confidence            47899999999998888776 44 662345668888887654 5678754432      2332221   23799999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCcee-c-chhhhh--c-CcEEEeeecCCCCCCCcHHHHHHHHHcCCCC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-A-HYGLFL--S-GRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~-~~~~~~--~-~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~  343 (353)
                      +.....+.+..+++.  |+-|++..+.. .+.. . ......  + ++.+.-.....+  ...+..+.+++++|+|-
T Consensus        80 p~~~h~~~~~~al~~--G~~v~~eKp~~-~~~~~~~~l~~~a~~~~~~~~~~~~~~r~--~p~~~~~~~~i~~g~iG  151 (346)
T 3cea_A           80 PTPFHPEMTIYAMNA--GLNVFCEKPLG-LDFNEVDEMAKVIKSHPNQIFQSGFMRRY--DDSYRYAKKIVDNGDIG  151 (346)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCCC-SCHHHHHHHHHHHHTCTTSCEECCCGGGT--CHHHHHHHHHHHTTTTC
T ss_pred             ChHhHHHHHHHHHHC--CCEEEEcCCCC-CCHHHHHHHHHHHHhCCCCeEEEeccccc--CHHHHHHHHHHHcCCCC
Confidence            987778888888886  55555543211 1111 0 011111  2 444432222211  24688999999999773

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.48  E-value=0.0051  Score=55.26  Aligned_cols=79  Identities=23%  Similarity=0.371  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-----------HHHHHhCCCceE-e--CCCCCCccHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-----------CEKAKAFGVTEF-L--NPNDNNEPVQQVIK  257 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-----------~~~~~~~G~~~~-~--~~~~~~~~~~~~~~  257 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++++++           .+.+++.+.... +  |..+ ..++.+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~   85 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD-GDAVAAAVA   85 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS-HHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHH
Confidence            5789999998 8999999999999999 89999888762           223344443322 2  3321 223333333


Q ss_pred             HHh--cCCccEEEeccCC
Q 018627          258 RIT--DGGADYSFECIGD  273 (353)
Q Consensus       258 ~~~--~~~~dvv~d~~g~  273 (353)
                      +..  .+++|++|+++|.
T Consensus        86 ~~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHHSCCSEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            221  2379999999884

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.48  E-value=0.0069  Score=53.91  Aligned_cols=79  Identities=15%  Similarity=0.137  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHHHh-C----CCce-E--eCCCCCC----ccHHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKA-F----GVTE-F--LNPNDNN----EPVQQVIKR  258 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~~~-~----G~~~-~--~~~~~~~----~~~~~~~~~  258 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ ++++.+.+.+ +    |... .  .|..+ .    ..+.+.+.+
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~   87 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL-SSSLLDCCEDIIDC   87 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-STTHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC-ccccHHHHHHHHHH
Confidence            4688999987 8999999999999999 8999988 8776554422 1    4322 2  23331 2    233333332


Q ss_pred             Hh--cCCccEEEeccCC
Q 018627          259 IT--DGGADYSFECIGD  273 (353)
Q Consensus       259 ~~--~~~~dvv~d~~g~  273 (353)
                      ..  -+++|++|+++|.
T Consensus        88 ~~~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHhcCCCCEEEECCCC
Confidence            21  2379999999883

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.48  E-value=0.0096  Score=53.32  Aligned_cols=79  Identities=23%  Similarity=0.262  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC----------------hhhHHHH----HhCCCceE---eCCCCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN----------------PEKCEKA----KAFGVTEF---LNPNDN  248 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~----------------~~~~~~~----~~~G~~~~---~~~~~~  248 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++                +++++.+    ++.+....   .|..+ 
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-   87 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD-   87 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC-
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC-
Confidence            5789999998 8999999999999999 89998776                4444433    33443322   23321 


Q ss_pred             CccHHHHHHHHh--cCCccEEEeccCC
Q 018627          249 NEPVQQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       249 ~~~~~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      ..++.+.+.+..  -+++|++++++|.
T Consensus        88 ~~~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           88 YDALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            223333333221  2479999999884

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.48  E-value=0.0071  Score=54.04  Aligned_cols=78  Identities=17%  Similarity=0.207  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-H----hCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-K----AFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~----~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++.++.+.+ +    +.|... .+  |..+ ..+..+.+.+..  -
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA-PPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5789999998 8999999999999999 999999998765443 1    124322 22  3321 223333333321  2


Q ss_pred             CCccEEEeccC
Q 018627          262 GGADYSFECIG  272 (353)
Q Consensus       262 ~~~dvv~d~~g  272 (353)
                      +++|++++++|
T Consensus       104 g~id~lv~nAg  114 (277)
T 4fc7_A          104 GRIDILINCAA  114 (277)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999998

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.48  E-value=0.0066  Score=53.56  Aligned_cols=79  Identities=14%  Similarity=0.254  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-E--eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~--~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+    ++.+... .  .|..+ ..++.+.+.+..  -+
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK-AEDRERLVAMAVNLHG   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            5789999998 8999999999999999 999999988765543    2334332 1  22221 222333333221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        91 ~iD~lv~~Ag~  101 (260)
T 2zat_A           91 GVDILVSNAAV  101 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.47  E-value=0.0082  Score=50.34  Aligned_cols=101  Identities=17%  Similarity=0.236  Sum_probs=67.8

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCC-ce--EeCCCCCCccHHHHHHHHh
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGV-TE--FLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~-~~--~~~~~~~~~~~~~~~~~~~  260 (353)
                      ..++++++||-+|+|. |..+..+++..+ ..+|++++.+++.++.+++    .|. ..  ++..+  ..+    +....
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~----~~~~~   90 (197)
T 3eey_A           18 MFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDG--HQN----MDKYI   90 (197)
T ss_dssp             HHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSC--GGG----GGGTC
T ss_pred             hcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HHH----Hhhhc
Confidence            4678899999998864 777778888754 2399999999988877754    343 12  22211  111    11122


Q ss_pred             cCCccEEEeccCC---------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627          261 DGGADYSFECIGD---------------TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       261 ~~~~dvv~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ++.||+|+-..+-               ...+..+.+.|+++ |+++.+...
T Consensus        91 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~~  141 (197)
T 3eey_A           91 DCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIYY  141 (197)
T ss_dssp             CSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEECC
T ss_pred             cCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEcc
Confidence            3589999866532               24688888999997 999887543

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.44  E-value=0.0063  Score=54.04  Aligned_cols=79  Identities=15%  Similarity=0.315  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChhh-HHHH-HhCCCce-E--eCCCCCCccHHHHHHH---Hhc
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKA-KAFGVTE-F--LNPNDNNEPVQQVIKR---ITD  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~~-~~~~-~~~G~~~-~--~~~~~~~~~~~~~~~~---~~~  261 (353)
                      .++++||+|+   |++|.++++.+...|+ +|+++++++++ .+.+ ++++... .  .|..+ ..++.+.+.+   ..+
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN-EEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            5789999984   7899999999999999 89999888765 2433 3344221 2  23321 2223323322   222


Q ss_pred             --CCccEEEeccCC
Q 018627          262 --GGADYSFECIGD  273 (353)
Q Consensus       262 --~~~dvv~d~~g~  273 (353)
                        +++|++|+++|.
T Consensus        84 ~~~~iD~lv~nAg~   97 (269)
T 2h7i_A           84 AGNKLDGVVHSIGF   97 (269)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             CCCCceEEEECCcc
Confidence              179999999873

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.43  E-value=0.011  Score=53.38  Aligned_cols=78  Identities=15%  Similarity=0.232  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh---------CCCce-Ee--CCCCCCccHHHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---------FGVTE-FL--NPNDNNEPVQQVIKRI  259 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~---------~G~~~-~~--~~~~~~~~~~~~~~~~  259 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+.+.+         .+... .+  |..+ ...+.+.+...
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~   94 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKST   94 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC-HHHHHHHHHHH
Confidence            4689999998 8999999999999999 89999999877654321         23222 12  2221 22233333322


Q ss_pred             h--cCCccEEEeccC
Q 018627          260 T--DGGADYSFECIG  272 (353)
Q Consensus       260 ~--~~~~dvv~d~~g  272 (353)
                      .  -+++|++|+++|
T Consensus        95 ~~~~g~id~li~~Ag  109 (303)
T 1yxm_A           95 LDTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHHSCCCEEEECCC
T ss_pred             HHHcCCCCEEEECCC
Confidence            1  137999999988

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.43  E-value=0.0083  Score=54.03  Aligned_cols=78  Identities=14%  Similarity=0.204  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CCce-Ee--CCCCCCccHHHHHHHH--hc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-FL--NPNDNNEPVQQVIKRI--TD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~~~-~~--~~~~~~~~~~~~~~~~--~~  261 (353)
                      .++++||+|+ |++|.+++..+...|+ +|+++++++++.+.+.+ +    +... .+  |..+ ..++.+.+...  ..
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD-PDMVQNTVSELIKVA  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-HHHHHHHHHHHHHHc
Confidence            5789999998 8999999999999999 89999999877654322 1    4322 22  3221 22333333322  12


Q ss_pred             CCccEEEeccC
Q 018627          262 GGADYSFECIG  272 (353)
Q Consensus       262 ~~~dvv~d~~g  272 (353)
                      +.+|++|+++|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47899999988

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=96.43  E-value=0.014  Score=52.04  Aligned_cols=79  Identities=15%  Similarity=0.250  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChh---hHHHHHh-CCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKAKA-FGVTEFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~~~-~G~~~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+   |++|.++++.+...|+ +|++++++++   ..+.+++ .+....+  |..+ ..++.+.+.+..  -
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSK-EEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            4789999985   5899999999999999 8999988875   3333332 3422222  3321 222333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        83 g~id~lv~nAg~   94 (275)
T 2pd4_A           83 GSLDFIVHSVAF   94 (275)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999873

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.42  E-value=0.0089  Score=53.36  Aligned_cols=76  Identities=21%  Similarity=0.355  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCce-Ee--CCCCCCccHHHHHHHHh-cCCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FL--NPNDNNEPVQQVIKRIT-DGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~-~~--~~~~~~~~~~~~~~~~~-~~~~dv  266 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+++++++++.+.+ ++++... .+  |..+ ..++.+.+.... .+++|+
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~id~  106 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTS-EDSVLAAIEAANQLGRLRY  106 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHTTSSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHhCCCCe
Confidence            5789999998 8999999999999999 899999999887765 3354332 22  3221 223333333331 127899


Q ss_pred             EEec
Q 018627          267 SFEC  270 (353)
Q Consensus       267 v~d~  270 (353)
                      ++.+
T Consensus       107 lv~~  110 (281)
T 3ppi_A          107 AVVA  110 (281)
T ss_dssp             EEEC
T ss_pred             EEEc
Confidence            9988

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.42  E-value=0.0081  Score=54.96  Aligned_cols=81  Identities=23%  Similarity=0.313  Sum_probs=51.6

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC----------hhhHH----HHHhCCCceEe-CCCCCC-ccHHH
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN----------PEKCE----KAKAFGVTEFL-NPNDNN-EPVQQ  254 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~----------~~~~~----~~~~~G~~~~~-~~~~~~-~~~~~  254 (353)
                      -.|+++||+|+ +++|.++++.+...|+ +|++++++          .++.+    .+++.|..... ..+-.+ .++.+
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            36789999987 8999999999999999 99999876          33333    33444543322 111112 22222


Q ss_pred             HHHHHh--cCCccEEEeccCC
Q 018627          255 VIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       255 ~~~~~~--~~~~dvv~d~~g~  273 (353)
                      .+.+..  -+++|++|+++|.
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHHcCCCCEEEECCCC
Confidence            333221  2379999999984

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.41  E-value=0.0084  Score=54.76  Aligned_cols=80  Identities=23%  Similarity=0.271  Sum_probs=51.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC------------hhhHHH----HHhCCCceEe---CCCCCCcc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN------------PEKCEK----AKAFGVTEFL---NPNDNNEP  251 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~------------~~~~~~----~~~~G~~~~~---~~~~~~~~  251 (353)
                      -.|+++||+|+ +++|.++++.+...|+ +|++++++            .++++.    +++.|.....   |..+ ..+
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~  121 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD-LAS  121 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHH
Confidence            36789999987 8999999999999999 89888765            343332    3344543322   3321 223


Q ss_pred             HHHHHHHHh--cCCccEEEeccCC
Q 018627          252 VQQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       252 ~~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      +.+.+.+..  -+++|++|+++|.
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            333333321  2479999999884

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=96.41  E-value=0.014  Score=51.60  Aligned_cols=79  Identities=16%  Similarity=0.269  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCCh---hhHHHHH-hCCCceEe--CCCCCCccHHHHHHHHhc--
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~---~~~~~~~-~~G~~~~~--~~~~~~~~~~~~~~~~~~--  261 (353)
                      .++++||+|+   |++|.++++.+...|+ +|+++++++   +..+.+. +.+....+  |..+ ..++.+.+.+...  
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAE-DASIDTMFAELGKVW   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            5788999985   5899999999999999 899988876   3333332 23432333  3321 2233333333322  


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        86 g~iD~lv~~Ag~   97 (265)
T 1qsg_A           86 PKFDGFVHSIGF   97 (265)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.40  E-value=0.009  Score=52.65  Aligned_cols=78  Identities=18%  Similarity=0.249  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh--HHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~--~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      ++++||+|+ |++|.++++.+...|+ +|+++++++++  .+.+    ++.+... .+  |..+ ..++.+.+.+..  -
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD-KANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            578999998 8999999999988899 89999888776  4432    2234322 22  3321 222333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        80 g~iD~lv~nAg~   91 (258)
T 3a28_C           80 GGFDVLVNNAGI   91 (258)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.40  E-value=0.015  Score=53.67  Aligned_cols=87  Identities=21%  Similarity=0.385  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++.++ +.++++|+..        .++.+.+.+     .|+|+.++.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~~~l~~-----aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF--------KPLEDLLRE-----SDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE--------CCHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc--------CCHHHHHhh-----CCEEEECCC
Confidence            57899999999999999999999999 99999998877 5555566421        123333332     788888776


Q ss_pred             ChH----HH-HHHHHHhccCCceEEEEc
Q 018627          273 DTG----MI-TTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       273 ~~~----~~-~~~~~~l~~~~G~~v~~g  295 (353)
                      ...    .+ ...+..++++ ..++.++
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~-ailIn~s  240 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKT-AILINIA  240 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            532    12 3455677775 7777665

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.39  E-value=0.015  Score=51.15  Aligned_cols=78  Identities=14%  Similarity=0.205  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce-Ee--CCCCCCccHHHHHHHH---hc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE-FL--NPNDNNEPVQQVIKRI---TD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~-~~--~~~~~~~~~~~~~~~~---~~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.|... .+  |..+ ..++.+.+...   ..
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ-ESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence            4688999987 8999999999999999 8999999987765442    224322 22  3321 22333333332   13


Q ss_pred             CCccEEEeccC
Q 018627          262 GGADYSFECIG  272 (353)
Q Consensus       262 ~~~dvv~d~~g  272 (353)
                      +.+|++++++|
T Consensus        82 g~id~lvnnAg   92 (260)
T 2qq5_A           82 GRLDVLVNNAY   92 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCceEEEECCc
Confidence            58999999994

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.39  E-value=0.031  Score=51.08  Aligned_cols=90  Identities=18%  Similarity=0.317  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      ...+|.|+|.|.+|..+++.+...|. +|++.++++++.+.+.+.|+...       .+..+.+.     ..|+||-|+.
T Consensus        30 ~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~~-----~aDvVi~~vp   96 (320)
T 4dll_A           30 YARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH-------EQARAAAR-----DADIVVSMLE   96 (320)
T ss_dssp             CCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE-------SSHHHHHT-----TCSEEEECCS
T ss_pred             CCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee-------CCHHHHHh-----cCCEEEEECC
Confidence            34689999999999999999999998 99999999999998888775432       12222222     4788888888


Q ss_pred             ChHHHHHHH------HHhccCCceEEEEcC
Q 018627          273 DTGMITTAL------QSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~~~~~~~~------~~l~~~~G~~v~~g~  296 (353)
                      .+..+...+      ..++++ ..++.++.
T Consensus        97 ~~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           97 NGAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             SHHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             CHHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            654444433      245554 55555543

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.38  E-value=0.0057  Score=54.03  Aligned_cols=80  Identities=15%  Similarity=0.264  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCC---CCeEEEEcCChhhHHHHHhC---CCc-eEe--CCCCCCccHHHHHHH---
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARG---ASRIIGVDTNPEKCEKAKAF---GVT-EFL--NPNDNNEPVQQVIKR---  258 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g---~~~vi~~~~~~~~~~~~~~~---G~~-~~~--~~~~~~~~~~~~~~~---  258 (353)
                      -.++++||+|+ |++|.++++.+...|   + +|++++++.++.+.++++   +.. ..+  |..+ ...+.+.+..   
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~   96 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEG   96 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCC-hHHHHHHHHHHHH
Confidence            35688999998 999999999999999   7 999998987754444332   222 222  3321 3334333332   


Q ss_pred             HhcC-CccEEEeccCC
Q 018627          259 ITDG-GADYSFECIGD  273 (353)
Q Consensus       259 ~~~~-~~dvv~d~~g~  273 (353)
                      ..+. ++|++|+++|.
T Consensus        97 ~~g~~~id~li~~Ag~  112 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HHGGGCCSEEEECCCC
T ss_pred             hcCCCCccEEEECCCc
Confidence            2232 69999999873

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.37  E-value=0.0093  Score=51.79  Aligned_cols=79  Identities=19%  Similarity=0.281  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCC--CCeEEEEcCChhhHHHHHhC-CCc-eEe--CCCCCCccHHHHHH---HHhcC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTNPEKCEKAKAF-GVT-EFL--NPNDNNEPVQQVIK---RITDG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g--~~~vi~~~~~~~~~~~~~~~-G~~-~~~--~~~~~~~~~~~~~~---~~~~~  262 (353)
                      .++++||+|+ |++|..+++.+...|  + +|++++++.++.+.+++. +.. ..+  |..+ ...+.+.+.   +..+.
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCC-HHHHHHHHHHHHHhcCC
Confidence            3678999998 899999999999999  7 999999998887777665 222 122  2221 122222222   22221


Q ss_pred             -CccEEEeccCC
Q 018627          263 -GADYSFECIGD  273 (353)
Q Consensus       263 -~~dvv~d~~g~  273 (353)
                       ++|++|+++|.
T Consensus        80 ~~id~li~~Ag~   91 (250)
T 1yo6_A           80 DGLSLLINNAGV   91 (250)
T ss_dssp             GCCCEEEECCCC
T ss_pred             CCCcEEEECCcc
Confidence             69999999874

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.36  E-value=0.013  Score=51.34  Aligned_cols=102  Identities=13%  Similarity=0.079  Sum_probs=70.6

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc----eEeCCCCCCccHHHHHHHHh
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT----EFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~----~~~~~~~~~~~~~~~~~~~~  260 (353)
                      +.+...+.++.+||-+|+| .|..+..+++..+. +|++++.+++.++.+++....    .++..+  ..++     ...
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d--~~~~-----~~~  117 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEAND--ILTK-----EFP  117 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECC--TTTC-----CCC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECc--cccC-----CCC
Confidence            3355678899999999986 67777888887787 999999999999999875432    122111  1110     112


Q ss_pred             cCCccEEEeccCC--------hHHHHHHHHHhccCCceEEEEcC
Q 018627          261 DGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       261 ~~~~dvv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ++.||+|+....-        ...+....+.|+|+ |+++....
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            3489999975321        23467778899997 99988764

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.36  E-value=0.014  Score=53.21  Aligned_cols=91  Identities=15%  Similarity=0.199  Sum_probs=62.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHH--CCCCeEEEEcCChhh--HHHHHhCCCceEeCCCCCCccHHHHHHHHhc-CCccEEEe
Q 018627          195 STVVIFGLGTVGLSVAQGAKA--RGASRIIGVDTNPEK--CEKAKAFGVTEFLNPNDNNEPVQQVIKRITD-GGADYSFE  269 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~--~g~~~vi~~~~~~~~--~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~dvv~d  269 (353)
                      -+|.|+|+|.+|...+..+..  .+.+.+.++++++++  .+.++++|....      ..++. .+.+.+. ..+|+||+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~------~~~~e-~ll~~~~~~~iDvV~~   77 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT------YAGVE-GLIKLPEFADIDFVFD   77 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE------SSHHH-HHHHSGGGGGEEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc------cCCHH-HHHhccCCCCCcEEEE
Confidence            478999999999998888844  466445566777666  566678886422      12233 3333222 37999999


Q ss_pred             ccCChHHHHHHHHHhcc--CCceEEE
Q 018627          270 CIGDTGMITTALQSCCD--GWGLAVT  293 (353)
Q Consensus       270 ~~g~~~~~~~~~~~l~~--~~G~~v~  293 (353)
                      +++...+.+.+..+++.  + .++++
T Consensus        78 atp~~~h~~~a~~al~a~~G-k~Vi~  102 (312)
T 1nvm_B           78 ATSASAHVQNEALLRQAKPG-IRLID  102 (312)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             CCChHHHHHHHHHHHHhCCC-CEEEE
Confidence            99976677778888887  7 77776

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.35  E-value=0.0082  Score=52.36  Aligned_cols=78  Identities=22%  Similarity=0.264  Sum_probs=51.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CCce-Ee--CCCCCCccHHHHHHHHh--cC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-FL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~~~-~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      ++++||+|+ |++|..++..+...|+ +|+++++++++.+.+.+ +    +... .+  |..+ ..++.+.+.+..  -+
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVAD-EGDVNAAIAATMEQFG   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence            578999998 8999999999999999 89999999877665422 2    3221 22  2221 222333333221  13


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|+++|.
T Consensus        80 ~id~li~~Ag~   90 (250)
T 2cfc_A           80 AIDVLVNNAGI   90 (250)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.35  E-value=0.022  Score=54.09  Aligned_cols=96  Identities=18%  Similarity=0.315  Sum_probs=67.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      ...+|+|.|.|.+|+.+++.++..|. .|++++.++++.+.+++.|...+.- +   ..-.+.+++.--..+|+++-+++
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-D---at~~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-D---ATRMDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-C---TTCHHHHHHTTTTTCSEEEECCS
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-C---CCCHHHHHhcCCCccCEEEECCC
Confidence            34679999999999999999999999 9999999999999999988764431 1   11123444432237999999998


Q ss_pred             ChHHH---HHHHHHhccCCceEEEE
Q 018627          273 DTGMI---TTALQSCCDGWGLAVTL  294 (353)
Q Consensus       273 ~~~~~---~~~~~~l~~~~G~~v~~  294 (353)
                      ....-   -...+.+.+. .+++.-
T Consensus        78 ~~~~n~~i~~~ar~~~p~-~~Iiar  101 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPH-LQIIAR  101 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             ChHHHHHHHHHHHHhCCC-CeEEEE
Confidence            74432   2233444554 455544

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.35  E-value=0.017  Score=52.23  Aligned_cols=95  Identities=13%  Similarity=0.099  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCc--eEeCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .+++++|+|+|++|.+++..+...|+++|+++.++.++.+.+ ++++..  .++       ++ +.+.+.. ..+|+|++
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~-------~~-~~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF-------SL-AEAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE-------CH-HHHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee-------eH-HHHHhhh-ccCCEEEE
Confidence            678999999999999999999999987999999998886554 556542  122       11 1222221 25999999


Q ss_pred             ccCChHHH-----HHHHHHhccCCceEEEEcCC
Q 018627          270 CIGDTGMI-----TTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       270 ~~g~~~~~-----~~~~~~l~~~~G~~v~~g~~  297 (353)
                      |++.....     ......++++ ..++++...
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y~  242 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPG-VIVSDIIYN  242 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTT-CEEEECCCS
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCCC
Confidence            99853210     0012345664 667777653

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.35  E-value=0.0099  Score=52.45  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHH---Hhc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKR---ITD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~---~~~  261 (353)
                      .++++||+|+ |++|..+++.+...|+ +|+++++++++.+.+    ++.+... .+  |..+ ...+.+.+..   ..+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~   90 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFG   90 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence            5788999998 8999999999999999 899999988765543    2334332 22  2221 1222222222   222


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        91 ~~id~li~~Ag~  102 (266)
T 1xq1_A           91 GKLDILINNLGA  102 (266)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCCcEEEECCCC
Confidence            579999999884

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.34  E-value=0.0037  Score=55.65  Aligned_cols=75  Identities=17%  Similarity=0.201  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh--cCCccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT--DGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~dvv~d  269 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|++++++.++.+....+    ..|..+ .....+.+....  -+++|++++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~-~~~~~~~~~~~~~~~g~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLRE-AAYADGLPGAVAAGLGRLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTS-HHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCC-HHHHHHHHHHHHHhcCCCCEEEE
Confidence            5789999998 8999999999999999 999998876654322111    112211 112222222221  247999999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      ++|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9884

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.34  E-value=0.01  Score=55.08  Aligned_cols=90  Identities=21%  Similarity=0.176  Sum_probs=63.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++....+.+++.|+..+       .++.+.+.     ..|+|+-++.
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------EDLNEMLP-----KCDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SCHHHHGG-----GCSEEEECSC
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CCHHHHHh-----cCCEEEECCC
Confidence            58899999999999999999999999 89999988766677777775422       12333332     3677777766


Q ss_pred             Ch-H---H-HHHHHHHhccCCceEEEEcC
Q 018627          273 DT-G---M-ITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~-~---~-~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .. .   . -...+..|+++ ..+|.++.
T Consensus       230 lt~~t~~li~~~~l~~mk~g-ailIN~aR  257 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKG-VLIVNNAR  257 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CCHHHHHhhcHHHHhcCCCC-CEEEECcC
Confidence            31 1   1 14556677775 77777663

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.33  E-value=0.015  Score=53.07  Aligned_cols=76  Identities=18%  Similarity=0.285  Sum_probs=49.1

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhH--HHHHhCCC---ceEeCCCCCCccHHHHHHHHhcC-CccE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC--EKAKAFGV---TEFLNPNDNNEPVQQVIKRITDG-GADY  266 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~--~~~~~~G~---~~~~~~~~~~~~~~~~~~~~~~~-~~dv  266 (353)
                      +++|||+|+ |.+|..+++.+...|. +|++++++.++.  +.+++++.   ...+..+-.+.   +.+.+...+ .+|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEF---SNIIRTIEKVQPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCH---HHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCCH---HHHHHHHHhcCCCE
Confidence            578999998 9999999999988998 999998877543  23444421   11221111121   223332223 6899


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      ||++++.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.33  E-value=0.0078  Score=52.84  Aligned_cols=77  Identities=13%  Similarity=0.261  Sum_probs=51.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCce-Ee--CCCCCCccHHHHHHHHhc--CCccEE
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-FL--NPNDNNEPVQQVIKRITD--GGADYS  267 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~-~~--~~~~~~~~~~~~~~~~~~--~~~dvv  267 (353)
                      +++||+|+ |++|.++++.+...|+ +|+++++++++.+.+. +++... .+  |..+ ..++.+.+.+...  +++|++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHhCCCCCEE
Confidence            46889987 8999999999999999 8999999988776553 343222 22  3221 2233333333222  379999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      ++++|.
T Consensus        79 vnnAg~   84 (248)
T 3asu_A           79 VNNAGL   84 (248)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.32  E-value=0.015  Score=49.26  Aligned_cols=98  Identities=15%  Similarity=0.108  Sum_probs=67.8

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE--eCCCCCCccHHHHHHHHhcCCccE
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      ..+.++.+||-+|+|. |..+..+++. +. ++++++.+++.++.+++.+...+  +..+  ..++      ...+.||+
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d--~~~~------~~~~~~D~  110 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQD--LFDW------TPDRQWDA  110 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECC--TTSC------CCSSCEEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEecc--cccC------CCCCceeE
Confidence            3477889999999863 6666777776 77 99999999999999988663332  2111  1111      12348999


Q ss_pred             EEeccCC--------hHHHHHHHHHhccCCceEEEEcCCC
Q 018627          267 SFECIGD--------TGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       267 v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      |+....-        ...+....+.|+++ |+++......
T Consensus       111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~~  149 (218)
T 3ou2_A          111 VFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVTD  149 (218)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEECC
T ss_pred             EEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCCC
Confidence            9964321        34577778899997 9998886543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.32  E-value=0.029  Score=56.03  Aligned_cols=79  Identities=16%  Similarity=0.175  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh---------hhHH----HHHhCCCceEeCCCCCCccHHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCE----KAKAFGVTEFLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~---------~~~~----~~~~~G~~~~~~~~~~~~~~~~~~~~  258 (353)
                      .|+.+||+|+ +++|.+.++.+...|+ +|++.+++.         ++.+    .+++.|...+.+..+ ..+..+.+.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d-~~~~~~~v~~   84 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNN-VLDGDKIVET   84 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCC-TTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCC-HHHHHHHHHH
Confidence            4788999998 8999999999999999 898887654         3332    334456544555443 2233323322


Q ss_pred             Hh--cCCccEEEeccCC
Q 018627          259 IT--DGGADYSFECIGD  273 (353)
Q Consensus       259 ~~--~~~~dvv~d~~g~  273 (353)
                      ..  -+.+|++++++|.
T Consensus        85 ~~~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           85 AVKNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            21  2479999999984

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.32  E-value=0.023  Score=50.84  Aligned_cols=79  Identities=22%  Similarity=0.287  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHH----HhC-CCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA----KAF-GVTE-FL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~----~~~-G~~~-~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      .++++||+|+ +++|.++++.+...|+ +|+++++ ++++.+.+    ++. +... .+  |..+ ..++.+.+.+..  
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTK-PSEIADMMAMVADR  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCC-HHHHHHHHHHHHHH
Confidence            4789999997 8999999999999999 8999988 55544433    222 3222 22  2221 222333333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++++++|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999884

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.32  E-value=0.043  Score=49.64  Aligned_cols=73  Identities=23%  Similarity=0.351  Sum_probs=54.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      .+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+.. ..+..+       .     -...|+||-|+..
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e-------~-----~~~aDvvi~~vp~   74 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASARE-------F-----AGVVDALVILVVN   74 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTT-------T-----TTTCSEEEECCSS
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHH-------H-----HhcCCEEEEECCC
Confidence            579999999999999999999998 9999999999999998888765 222211       0     0146777777776


Q ss_pred             hHHHHHH
Q 018627          274 TGMITTA  280 (353)
Q Consensus       274 ~~~~~~~  280 (353)
                      +......
T Consensus        75 ~~~~~~v   81 (303)
T 3g0o_A           75 AAQVRQV   81 (303)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4444444

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.32  E-value=0.0074  Score=54.10  Aligned_cols=78  Identities=21%  Similarity=0.319  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCce--Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~--~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++++++.+.+.    +.|...  .+  |..+ ...+.+.+....  .
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED-MTFAEQFVAQAGKLM  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCC-HHHHHHHHHHHHHHc
Confidence            4789999998 8999999999999999 8999999988766542    234322  22  2221 122222222221  2


Q ss_pred             CCccEEEec-cC
Q 018627          262 GGADYSFEC-IG  272 (353)
Q Consensus       262 ~~~dvv~d~-~g  272 (353)
                      +++|++|++ .|
T Consensus       105 g~iD~li~naag  116 (286)
T 1xu9_A          105 GGLDMLILNHIT  116 (286)
T ss_dssp             TSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999998 44

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.31  E-value=0.0098  Score=52.84  Aligned_cols=79  Identities=22%  Similarity=0.345  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHH----HHhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~----~~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ |++|.++++.+...|+ +|+++++ +++..+.    +++.+... ++  |.. +..++.+.+.+..  .
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~~~~~  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA-SESDFIEAIQTIVQSD  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCC-CHHHHHHHHHHHHHhc
Confidence            5789999998 8999999999999999 8888887 4444333    33445333 22  222 1223333333321  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999884

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.31  E-value=0.016  Score=58.07  Aligned_cols=79  Identities=20%  Similarity=0.230  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC---------ChhhHH----HHHhCCCceEeCCCCCCccHHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT---------NPEKCE----KAKAFGVTEFLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~---------~~~~~~----~~~~~G~~~~~~~~~~~~~~~~~~~~  258 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+++++         +.++.+    .+++.+...+.+..+ ..+..+.+.+
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d-~~~~~~~~~~   95 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNS-VIDGAKVIET   95 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCC-GGGHHHHHC-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCC-HHHHHHHHHH
Confidence            5789999998 8999999999999999 8888866         444433    334456555666543 3334444433


Q ss_pred             Hhc--CCccEEEeccCC
Q 018627          259 ITD--GGADYSFECIGD  273 (353)
Q Consensus       259 ~~~--~~~dvv~d~~g~  273 (353)
                      ...  +.+|++|+++|.
T Consensus        96 ~~~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           96 AIKAFGRVDILVNNAGI  112 (613)
T ss_dssp             ---------CEECCCCC
T ss_pred             HHHHCCCCcEEEECCCC
Confidence            322  379999999984

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.30  E-value=0.0037  Score=57.20  Aligned_cols=103  Identities=20%  Similarity=0.239  Sum_probs=68.1

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      .+..+++++++||.+|+|. |..+..+++..+. .+|++++.+++.++.+++    .|...+....   .+..+...  .
T Consensus        68 ~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~---~d~~~~~~--~  141 (317)
T 1dl5_A           68 MEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC---GDGYYGVP--E  141 (317)
T ss_dssp             HHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGCCG--G
T ss_pred             HHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEE---CChhhccc--c
Confidence            3566788999999999865 7777777776541 379999999998887754    3543321110   11111010  1


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhccCCceEEEEc
Q 018627          261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .+.||+|+.............+.|+++ |+++..-
T Consensus       142 ~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          142 FSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             GCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             CCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence            347999998765444446777899997 9988763

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.30  E-value=0.04  Score=50.48  Aligned_cols=76  Identities=16%  Similarity=0.219  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hhHHHHHhC------CCceEeCCCCCCccHHHHHHHHhc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAKAF------GVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~----~~~~~~~~~------G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      .+++|||+|+ |.+|..+++.+...|. +|++++++.    +..+.+++.      .-..++..+  -.+ .+.+.+...
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D--l~d-~~~~~~~~~   99 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGD--IRD-LTTCEQVMK   99 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECC--TTC-HHHHHHHTT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEcc--CCC-HHHHHHHhc
Confidence            4689999998 9999999999999998 899988854    333344332      222222222  111 223333333


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                       ++|+||++++.
T Consensus       100 -~~d~Vih~A~~  110 (351)
T 3ruf_A          100 -GVDHVLHQAAL  110 (351)
T ss_dssp             -TCSEEEECCCC
T ss_pred             -CCCEEEECCcc
Confidence             79999999884

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.30  E-value=0.0071  Score=52.53  Aligned_cols=101  Identities=23%  Similarity=0.247  Sum_probs=67.7

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh--c
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~--~  261 (353)
                      ...++++||-+|+| .|..+..+++..  +. +|++++.+++..+.+++    .|....+...  ..+..+.+..+.  +
T Consensus        69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~--~~d~~~~l~~l~~~~  144 (232)
T 3cbg_A           69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDG-QIIACDQDPNATAIAKKYWQKAGVAEKISLR--LGPALATLEQLTQGK  144 (232)
T ss_dssp             HHHTCCEEEEECCT-TSHHHHHHHTTSCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEE--ESCHHHHHHHHHTSS
T ss_pred             HhcCCCEEEEecCC-CCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhcC
Confidence            44577899999986 788888888876  44 99999999998887754    3543211111  223344444432  2


Q ss_pred             --CCccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          262 --GGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       262 --~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                        +.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       145 ~~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~  182 (232)
T 3cbg_A          145 PLPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDN  182 (232)
T ss_dssp             SCCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEEC
T ss_pred             CCCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeC
Confidence              579999844332   24577888999997 9988753

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.29  E-value=0.013  Score=54.13  Aligned_cols=89  Identities=25%  Similarity=0.377  Sum_probs=64.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++.++ +.++++|+..        .++.+.+.     ..|+|+.++.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~ell~-----~aDvV~l~~P  228 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ--------LPLEEIWP-----LCDFITVHTP  228 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE--------CCHHHHGG-----GCSEEEECCC
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee--------CCHHHHHh-----cCCEEEEecC
Confidence            57899999999999999999999999 99999887766 3566677642        12222222     4788888876


Q ss_pred             ChH----HH-HHHHHHhccCCceEEEEcCC
Q 018627          273 DTG----MI-TTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~~----~~-~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ...    .+ ...+..++++ +.++.++..
T Consensus       229 ~t~~t~~li~~~~l~~mk~g-ailIN~arg  257 (335)
T 2g76_A          229 LLPSTTGLLNDNTFAQCKKG-VRVVNCARG  257 (335)
T ss_dssp             CCTTTTTSBCHHHHTTSCTT-EEEEECSCT
T ss_pred             CCHHHHHhhCHHHHhhCCCC-cEEEECCCc
Confidence            532    12 3566778886 888888763

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.28  E-value=0.024  Score=50.16  Aligned_cols=80  Identities=13%  Similarity=0.164  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      ..++++||+|+ +++|.++++.+...|+ +|++++ ++.++.+..    ++.+... .+  |..+ ..+..+.+.+..  
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~  100 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD-FESCERCAEKVLAD  100 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHH
Confidence            45788999998 8999999999999999 888876 555444332    2333322 22  3321 222333333221  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++|+++|.
T Consensus       101 ~g~id~li~nAg~  113 (269)
T 3gk3_A          101 FGKVDVLINNAGI  113 (269)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            1379999999884

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.27  E-value=0.01  Score=55.45  Aligned_cols=90  Identities=18%  Similarity=0.258  Sum_probs=63.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCe-EEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASR-IIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~-vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .|++|.|+|.|.+|..+++.++..|+ + |++.+++.++.+.+.++|+..+       .++.+.+.     ..|+|+.++
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvV~l~~  229 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGARRV-------ENIEELVA-----QADIVTVNA  229 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTEEEC-------SSHHHHHH-----TCSEEEECC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCcEec-------CCHHHHHh-----cCCEEEECC
Confidence            58999999999999999999999999 6 9999988766676777775421       12333333     378888777


Q ss_pred             CCh----HHH-HHHHHHhccCCceEEEEcC
Q 018627          272 GDT----GMI-TTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       272 g~~----~~~-~~~~~~l~~~~G~~v~~g~  296 (353)
                      ...    ..+ ...+..|+++ ..+|.++.
T Consensus       230 P~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          230 PLHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            643    112 3455667775 77777764

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.25  E-value=0.019  Score=51.18  Aligned_cols=99  Identities=13%  Similarity=0.212  Sum_probs=68.4

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC----CCc-e--EeCCCCCCccHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVT-E--FLNPNDNNEPVQQVIK  257 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----G~~-~--~~~~~~~~~~~~~~~~  257 (353)
                      +.+..++.++++||-+|+|. |..+..+++..|. +|++++.+++..+.+++.    |.. .  ++..     ++    .
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-----d~----~  124 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-----GW----E  124 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-----CG----G
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-----Ch----h
Confidence            34556788999999999863 7777888877788 999999999988877552    322 1  2211     11    1


Q ss_pred             HHhcCCccEEEec-----cCC---hHHHHHHHHHhccCCceEEEEcC
Q 018627          258 RITDGGADYSFEC-----IGD---TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       258 ~~~~~~~dvv~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+ ++.||+|+..     ++.   ...+....+.|+|+ |+++....
T Consensus       125 ~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          125 QF-DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             GC-CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             hC-CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence            11 2579999864     221   34577888899997 99887654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.25  E-value=0.025  Score=50.35  Aligned_cols=88  Identities=14%  Similarity=0.130  Sum_probs=63.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      +++++|+|+|++|.+++..+...|. +|+++.|+.++.+.+.++|+. ...+.  +  +         ..+|+||+|++.
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~-~~~~~--~--l---------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCD-CFMEP--P--K---------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCE-EESSC--C--S---------SCCSEEEECCTT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-EecHH--H--h---------ccCCEEEEcccC
Confidence            8999999999999999999999995 999999999988766677743 33332  1  1         159999999864


Q ss_pred             hH----HH--HHHHHHhccCCceEEEEcCC
Q 018627          274 TG----MI--TTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       274 ~~----~~--~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ..    .+  +.....++++ ..++++-..
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~-~~v~D~vY~  211 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEG-KLAYDLAYG  211 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHC-SEEEESCCS
T ss_pred             CCCCCCCCChHHHHhhCCCC-CEEEEeCCC
Confidence            21    11  1222367775 777777543

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.24  E-value=0.016  Score=49.48  Aligned_cols=97  Identities=15%  Similarity=0.138  Sum_probs=61.7

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +|||+|+ |.+|..+++.+...|. +|+++++++++.+.+  .++ .++..+  -.+..+.+.+... ++|+||.++|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D--~~d~~~~~~~~~~-~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFD--VDWTPEEMAKQLH-GMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECC--TTSCHHHHHTTTT-TCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEec--ccCCHHHHHHHHc-CCCEEEECCcCC
Confidence            6999997 9999999999999998 999999998765432  122 222222  1121234444333 699999999853


Q ss_pred             H---------HHHHHHHHhccC-CceEEEEcCCCC
Q 018627          275 G---------MITTALQSCCDG-WGLAVTLGVPKL  299 (353)
Q Consensus       275 ~---------~~~~~~~~l~~~-~G~~v~~g~~~~  299 (353)
                      .         .....++.++.. .+++|.++....
T Consensus        75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~  109 (219)
T 3dqp_A           75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS  109 (219)
T ss_dssp             TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred             CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence            1         123334444432 258998887544

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.24  E-value=0.035  Score=49.62  Aligned_cols=79  Identities=18%  Similarity=0.317  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChh---hHHHHH-hCCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~~-~~G~~~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+   |++|.++++.+...|+ +|++++++++   ..+.++ +.+....+  |..+ ..++.+.+....  -
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSL-DEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence            5789999986   5899999999999999 8999988875   333332 23422222  3321 222333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        98 g~iD~lv~~Ag~  109 (285)
T 2p91_A           98 GSLDIIVHSIAY  109 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.23  E-value=0.037  Score=52.29  Aligned_cols=111  Identities=17%  Similarity=0.152  Sum_probs=69.7

Q ss_pred             HHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----------CCC--ceE--eC
Q 018627          180 AGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----------FGV--TEF--LN  244 (353)
Q Consensus       180 ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----------~G~--~~~--~~  244 (353)
                      ..+..+.+..+++++++||-+|+| .|..++++|+..++.+|++++.+++-.+.+++           +|.  ..+  +.
T Consensus       160 ~~i~~il~~l~l~~gd~VLDLGCG-tG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~  238 (438)
T 3uwp_A          160 DLVAQMIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER  238 (438)
T ss_dssp             HHHHHHHHHHCCCTTCEEEEESCT-TSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred             HHHHHHHHhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence            334445577789999999999986 68888888888898679999999865554432           343  222  22


Q ss_pred             CCCCCccHHHHHHHHhcCCccEEEeccC--C---hHHHHHHHHHhccCCceEEEEcCC
Q 018627          245 PNDNNEPVQQVIKRITDGGADYSFECIG--D---TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g--~---~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      -+..+..+...    . ..+|+||-..-  .   ...+...++.|+++ |+||..-..
T Consensus       239 GD~~~lp~~d~----~-~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f  290 (438)
T 3uwp_A          239 GDFLSEEWRER----I-ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPF  290 (438)
T ss_dssp             CCTTSHHHHHH----H-HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCS
T ss_pred             CcccCCccccc----c-CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeecc
Confidence            11111112111    1 25999985321  1   12345566779997 999987553

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.23  E-value=0.02  Score=51.16  Aligned_cols=93  Identities=11%  Similarity=0.081  Sum_probs=61.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCC--ceEeCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TEFLNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~--~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .++++||+|+|++|.+++..+...|+++|+++.|+.++.+.+ ++++.  ...+.+.    ++       ....+|+|++
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~----~l-------~~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE----AL-------EGQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG----GG-------TTCCCSEEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH----Hh-------cccCCCEEEE
Confidence            589999999999999999999999977999999999887755 44443  2223221    11       1146999999


Q ss_pred             ccCChHHH---HHHHHHhccCCceEEEEcCC
Q 018627          270 CIGDTGMI---TTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       270 ~~g~~~~~---~~~~~~l~~~~G~~v~~g~~  297 (353)
                      |++....-   ......++++ ..++++-..
T Consensus       188 aTp~gm~~~~~~i~~~~l~~~-~~V~DlvY~  217 (272)
T 3pwz_A          188 ATSASLTADLPPLPADVLGEA-ALAYELAYG  217 (272)
T ss_dssp             CSSGGGGTCCCCCCGGGGTTC-SEEEESSCS
T ss_pred             CCCCCCCCCCCCCCHHHhCcC-CEEEEeecC
Confidence            98742110   0012356664 666666543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.20  E-value=0.01  Score=54.51  Aligned_cols=79  Identities=20%  Similarity=0.276  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC-----hhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-----PEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRI  259 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~-----~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~  259 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++.++     +++.+.+    ++.+... .+  |..+ ..++.+.+.+.
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~   81 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS-QVSVDRAIDQI   81 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHH
Confidence            3678999998 8999999999999999 88887665     3443333    2234322 22  3321 23333333332


Q ss_pred             h--cCCccEEEeccCC
Q 018627          260 T--DGGADYSFECIGD  273 (353)
Q Consensus       260 ~--~~~~dvv~d~~g~  273 (353)
                      .  .+++|++++++|.
T Consensus        82 ~~~~g~iD~lVnnAG~   97 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGH   97 (324)
T ss_dssp             HHHHSCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence            2  2479999999983

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.20  E-value=0.0053  Score=53.69  Aligned_cols=76  Identities=8%  Similarity=-0.007  Sum_probs=51.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-c--CChhhHHHH-HhC-CCceEeCCCCCCccHHHHHHHHhcCCccEE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-D--TNPEKCEKA-KAF-GVTEFLNPNDNNEPVQQVIKRITDGGADYS  267 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~--~~~~~~~~~-~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv  267 (353)
                      ++++||+|+ |++|.++++.+...|+ +|+++ +  +++++.+.+ +++ +. .+.+..+ -..+.+.+.+. .+++|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~-v~~~~~~~~~~-~g~iD~l   76 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQK-PERLVDATLQH-GEAIDTI   76 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCC-GGGHHHHHGGG-SSCEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHH-HHHHHHHHHHH-cCCCCEE
Confidence            468999987 8999999999999999 89999 6  888777655 334 32 2333221 22333333332 2479999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      |+++|.
T Consensus        77 v~~Ag~   82 (244)
T 1zmo_A           77 VSNDYI   82 (244)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.19  E-value=0.029  Score=49.23  Aligned_cols=102  Identities=19%  Similarity=0.235  Sum_probs=67.1

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh--
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~--  260 (353)
                      ....++++||-+|+| .|..++.+++.+  +. +|++++.+++..+.+++    .|...-+...  ..+..+.+..+.  
T Consensus        75 ~~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~  150 (247)
T 1sui_A           75 LKLINAKNTMEIGVY-TGYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFR--EGPALPVLDEMIKD  150 (247)
T ss_dssp             HHHTTCCEEEEECCG-GGHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHS
T ss_pred             HHhhCcCEEEEeCCC-cCHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEE--ECCHHHHHHHHHhc
Confidence            345677899999875 577778888886  45 99999999998877754    4543211111  123333333331  


Q ss_pred             ---cCCccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          261 ---DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       261 ---~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                         .+.||+||-....   ...+..+.+.|+++ |.++.-.
T Consensus       151 ~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~  190 (247)
T 1sui_A          151 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  190 (247)
T ss_dssp             GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred             cCCCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence               3589998854332   34577888999997 9988643

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.19  E-value=0.0079  Score=52.66  Aligned_cols=79  Identities=27%  Similarity=0.384  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~-~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|..++..+...|+ +|++++++ +++.+.+    ++.+... .+  |..+ ..++.+.+.+..  -
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT-SEACQQLVDEFVAKF   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4688999998 9999999999999999 89999887 6655433    2234322 22  3221 222333333221  1


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.19  E-value=0.017  Score=53.05  Aligned_cols=41  Identities=17%  Similarity=0.222  Sum_probs=35.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA  234 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~~~~  234 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            5788999987 8999999999999999 899998 888776544

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.18  E-value=0.034  Score=52.64  Aligned_cols=98  Identities=15%  Similarity=0.130  Sum_probs=63.4

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC--CeEEEEcCChhhHHHHHh-CC------CceE-eCCCCCCccHHHHHHHHhcCCc
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGA--SRIIGVDTNPEKCEKAKA-FG------VTEF-LNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~--~~vi~~~~~~~~~~~~~~-~G------~~~~-~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      .+|+|+|+|.+|..+++.+...|.  ..|++.+++.++.+.+.+ ++      +..+ .+.. +..++.+.+...   ++
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~-d~~~l~~~l~~~---~~   77 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDAD-SIEELVALINEV---KP   77 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTT-CHHHHHHHHHHH---CC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCC-CHHHHHHHHHhh---CC
Confidence            479999999999999998888873  389999999988776532 32      2221 2222 112233333321   68


Q ss_pred             cEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          265 DYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       265 dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      |+|++|++.......+..++..+ -+++.+...
T Consensus        78 DvVin~ag~~~~~~v~~a~l~~g-~~vvD~a~~  109 (405)
T 4ina_A           78 QIVLNIALPYQDLTIMEACLRTG-VPYLDTANY  109 (405)
T ss_dssp             SEEEECSCGGGHHHHHHHHHHHT-CCEEESSCC
T ss_pred             CEEEECCCcccChHHHHHHHHhC-CCEEEecCC
Confidence            99999998654445555677775 677766443

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.18  E-value=0.021  Score=52.98  Aligned_cols=88  Identities=24%  Similarity=0.265  Sum_probs=64.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++. +.+.+.+.|+..+       .++.+.+.+     .|+|+-++.
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~ell~~-----aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDALFEQ-----SDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHHHHhh-----CCEEEEecc
Confidence            47899999999999999999999999 999998775 4455666776421       234444443     788888876


Q ss_pred             ChH----H-HHHHHHHhccCCceEEEEc
Q 018627          273 DTG----M-ITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       273 ~~~----~-~~~~~~~l~~~~G~~v~~g  295 (353)
                      ...    . -...+..|+++ ..+|.++
T Consensus       225 lt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             CcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            321    1 23566778886 8888887

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.17  E-value=0.04  Score=50.17  Aligned_cols=74  Identities=16%  Similarity=0.190  Sum_probs=50.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC---hhhHHHHH-h----CCCc-eEeCCCCCCcc-HHHHHHHHhcC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---PEKCEKAK-A----FGVT-EFLNPNDNNEP-VQQVIKRITDG  262 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~---~~~~~~~~-~----~G~~-~~~~~~~~~~~-~~~~~~~~~~~  262 (353)
                      .++++||+|+|+.|.+++..+...|+++|+++.|+   .++.+.+. +    .+.. ..+...  +.+ +.+.+.     
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~--~l~~~~~~l~-----  219 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLA--DQHAFTEALA-----  219 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETT--CHHHHHHHHH-----
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechH--hhhhhHhhcc-----
Confidence            58899999999999999999999999889999999   66655442 2    2322 122222  111 122233     


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|+||+|++.
T Consensus       220 ~~DiIINaTp~  230 (312)
T 3t4e_A          220 SADILTNGTKV  230 (312)
T ss_dssp             HCSEEEECSST
T ss_pred             CceEEEECCcC
Confidence            38999999874

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.16  E-value=0.021  Score=55.10  Aligned_cols=94  Identities=17%  Similarity=0.146  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHh-CCCceE-eCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA-FGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~-~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .+++|+|+|+|.+|.+++..+... +. +|++++++.++.+.+.+ .+...+ ++..+ ..++.+.+.     ++|+|++
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d-~~~l~~~l~-----~~DvVIn   94 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD-DSALDKVLA-----DNDVVIS   94 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC-HHHHHHHHH-----TSSEEEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC-HHHHHHHHc-----CCCEEEE
Confidence            357899999999999999888877 66 89999999988776644 243222 22221 112222222     5999999


Q ss_pred             ccCChHHHHHHHHHhccCCceEEEE
Q 018627          270 CIGDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       270 ~~g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      |++..........++..+ -.++..
T Consensus        95 ~tp~~~~~~v~~a~l~~g-~~vvd~  118 (467)
T 2axq_A           95 LIPYTFHPNVVKSAIRTK-TDVVTS  118 (467)
T ss_dssp             CSCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred             CCchhhhHHHHHHHHhcC-CEEEEe
Confidence            998643333334556664 566655

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.14  E-value=0.02  Score=52.38  Aligned_cols=78  Identities=22%  Similarity=0.294  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC---------ChhhHH----HHHhCCCceEeCCCCCCccHHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT---------NPEKCE----KAKAFGVTEFLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~---------~~~~~~----~~~~~G~~~~~~~~~~~~~~~~~~~~  258 (353)
                      .|+++||+|+ |++|..+++.+...|+ +|++.++         +.++.+    .+++.+.....+..+ ..+..+.+.+
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~-~~~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC-HHHHHHHHHH
Confidence            5789999998 8999999999999999 8888643         444443    233445444455542 3333333332


Q ss_pred             Hh--cCCccEEEeccC
Q 018627          259 IT--DGGADYSFECIG  272 (353)
Q Consensus       259 ~~--~~~~dvv~d~~g  272 (353)
                      ..  .+++|++|+++|
T Consensus        86 ~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHTSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            21  247999999988

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.14  E-value=0.044  Score=49.93  Aligned_cols=77  Identities=18%  Similarity=0.222  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHH----HHHh-CCC-ceEeCCCCCCccHHHHHHHHhc-CCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKA-FGV-TEFLNPNDNNEPVQQVIKRITD-GGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~----~~~~-~G~-~~~~~~~~~~~~~~~~~~~~~~-~~~  264 (353)
                      .+.+|||+|+ |.+|..+++.+...|+ +|++++++.++.+    .+.+ .+. ..++..+-.+.   +.+.+... .++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDE---RALARIFDAHPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCH---HHHHHHHHHSCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCH---HHHHHHHhccCC
Confidence            5679999998 9999999999999999 8999987654422    2211 121 22222221122   22333222 379


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+||++++.
T Consensus        80 d~vih~A~~   88 (341)
T 3enk_A           80 TAAIHFAAL   88 (341)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECccc
Confidence            999999874

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.14  E-value=0.0073  Score=52.09  Aligned_cols=96  Identities=16%  Similarity=0.177  Sum_probs=65.5

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCC------CeEEEEcCChhhHHHHHhC----C-------CceEeCCCCCCccH
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGA------SRIIGVDTNPEKCEKAKAF----G-------VTEFLNPNDNNEPV  252 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~------~~vi~~~~~~~~~~~~~~~----G-------~~~~~~~~~~~~~~  252 (353)
                      .++++++||.+|+|. |..+..+++..+.      .+|++++.+++..+.+++.    +       ...++..+     .
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d-----~  154 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGD-----G  154 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESC-----G
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECC-----c
Confidence            578899999999874 7777778876652      3899999999888777542    2       11122111     1


Q ss_pred             HHHHHHHhc-CCccEEEeccCChHHHHHHHHHhccCCceEEEEc
Q 018627          253 QQVIKRITD-GGADYSFECIGDTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       253 ~~~~~~~~~-~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .+   .... +.||+|+...........+.+.|+++ |+++..-
T Consensus       155 ~~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  194 (227)
T 1r18_A          155 RK---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPV  194 (227)
T ss_dssp             GG---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             cc---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEEE
Confidence            11   1112 47999998776556668888999997 9987653

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.12  E-value=0.014  Score=54.49  Aligned_cols=109  Identities=17%  Similarity=0.215  Sum_probs=72.3

Q ss_pred             hhhHHHHHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC----hhh---------HHHHHhCCCceE
Q 018627          177 GLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN----PEK---------CEKAKAFGVTEF  242 (353)
Q Consensus       177 ~~~ta~~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~----~~~---------~~~~~~~G~~~~  242 (353)
                      .++.-+.++ +..+ --++.+|+|.|+|..|..+++++..+|+++|+.++++    .++         ..++++...   
T Consensus       175 ~lAal~~A~-~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~---  250 (388)
T 1vl6_A          175 VSAAFLNAL-KLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP---  250 (388)
T ss_dssp             HHHHHHHHH-HHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT---
T ss_pred             HHHHHHHHH-HHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc---
Confidence            443444444 3333 3367899999999999999999999999999999998    544         334444321   


Q ss_pred             eCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          243 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                        .. ...++.+.++     ++|++|-+++....-++.++.|+++ ..++.+.++.
T Consensus       251 --~~-~~~~L~eav~-----~ADVlIG~Sap~l~t~emVk~Ma~~-pIIfalSNPt  297 (388)
T 1vl6_A          251 --ER-LSGDLETALE-----GADFFIGVSRGNILKPEWIKKMSRK-PVIFALANPV  297 (388)
T ss_dssp             --TC-CCSCHHHHHT-----TCSEEEECSCSSCSCHHHHTTSCSS-CEEEECCSSS
T ss_pred             --cC-chhhHHHHHc-----cCCEEEEeCCCCccCHHHHHhcCCC-CEEEEcCCCC
Confidence              11 1345666654     3799999887433346666778875 6666666544

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.11  E-value=0.0091  Score=53.16  Aligned_cols=96  Identities=18%  Similarity=0.173  Sum_probs=61.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          196 TVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +|||+|+ |.+|..+++.+...  |. +|++++++.++.+.+...++..+. |..  +   .+.+.+... ++|+||.++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~D~~--d---~~~l~~~~~-~~d~vi~~a   74 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYN--Q---PESLQKAFA-GVSKLLFIS   74 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEEECCTT--C---HHHHHHHTT-TCSEEEECC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEEEeccC--C---HHHHHHHHh-cCCEEEEcC
Confidence            6899998 99999999988887  88 899998988777666555544332 222  2   123333332 589999998


Q ss_pred             CCh-------HHHHHHHHHhccC-CceEEEEcCCC
Q 018627          272 GDT-------GMITTALQSCCDG-WGLAVTLGVPK  298 (353)
Q Consensus       272 g~~-------~~~~~~~~~l~~~-~G~~v~~g~~~  298 (353)
                      +..       ......++.++.. -+++|.+++..
T Consensus        75 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           75 GPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            741       1223334444432 14888887643

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.11  E-value=0.017  Score=51.62  Aligned_cols=77  Identities=19%  Similarity=0.318  Sum_probs=57.3

Q ss_pred             CCCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++++|+|.| .+|..+++++...|+ +|+.+.+.                     ..++.+.++     .+|+||.+
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~---------------------t~~L~~~~~-----~ADIVI~A  211 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRF---------------------TTDLKSHTT-----KADILIVA  211 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT---------------------CSSHHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCC---------------------chhHHHhcc-----cCCEEEEC
Confidence            479999999985 489999999999999 88877432                     123444443     48999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|.+..+..  +.++++ ..++.+|...
T Consensus       212 vg~p~~I~~--~~vk~G-avVIDvgi~~  236 (285)
T 3l07_A          212 VGKPNFITA--DMVKEG-AVVIDVGINH  236 (285)
T ss_dssp             CCCTTCBCG--GGSCTT-CEEEECCCEE
T ss_pred             CCCCCCCCH--HHcCCC-cEEEEecccC
Confidence            998655433  457886 8888998653

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.11  E-value=0.012  Score=50.32  Aligned_cols=102  Identities=14%  Similarity=0.199  Sum_probs=66.5

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc-
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD-  261 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~-  261 (353)
                      ....++++||-+|+| .|..+..+++..  +. +|++++.+++..+.+++    .|....+...  ..+..+.+..+.. 
T Consensus        54 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~  129 (223)
T 3duw_A           54 VQIQGARNILEIGTL-GGYSTIWLARGLSSGG-RVVTLEASEKHADIARSNIERANLNDRVEVR--TGLALDSLQQIENE  129 (223)
T ss_dssp             HHHHTCSEEEEECCT-TSHHHHHHHTTCCSSC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHHT
T ss_pred             HHhhCCCEEEEecCC-ccHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhc
Confidence            345678999999886 577778888876  45 99999999988877654    4543211111  1233333333321 


Q ss_pred             --CCccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          262 --GGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       262 --~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                        +.||+||-....   ...+..+.+.|+++ |.++.-.
T Consensus       130 ~~~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~  167 (223)
T 3duw_A          130 KYEPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDN  167 (223)
T ss_dssp             TCCCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEES
T ss_pred             CCCCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence              469999854322   34577788899997 9887654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.10  E-value=0.0074  Score=53.70  Aligned_cols=78  Identities=18%  Similarity=0.304  Sum_probs=50.5

Q ss_pred             cCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       190 ~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      ....|++|||+|+ +++|.++++.+...|+ +|+++++++++...    .+..+ .|..+ ..++.+.+.+..  -+++|
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~----~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   83 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDVN----VSDHFKIDVTN-EEEVKEAVEKTTKKYGRID   83 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CTT----SSEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhccC----ceeEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence            3457899999998 8999999999999999 89999888765411    11111 23321 223333333321  24799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        84 ~lv~nAg~   91 (269)
T 3vtz_A           84 ILVNNAGI   91 (269)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.10  E-value=0.019  Score=51.75  Aligned_cols=76  Identities=21%  Similarity=0.334  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHH--HHHHHHhcCCccEEE
Q 018627          192 SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ--QVIKRITDGGADYSF  268 (353)
Q Consensus       192 ~~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~dvv~  268 (353)
                      -.|++++|+|.| .+|..++.++...|+ +|+.+.+...                     ++.  +.++     .+|+||
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~---------------------~l~l~~~~~-----~ADIVI  215 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTS---------------------TEDMIDYLR-----TADIVI  215 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSC---------------------HHHHHHHHH-----TCSEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCC---------------------Cchhhhhhc-----cCCEEE
Confidence            479999999985 589999999999999 8888865222                     222  3333     389999


Q ss_pred             eccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          269 ECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       269 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .++|.+..+..  ..++++ ..++.+|..
T Consensus       216 ~Avg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          216 AAMGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             ECSCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             ECCCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            99998655443  457886 888899864

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.09  E-value=0.029  Score=52.08  Aligned_cols=132  Identities=18%  Similarity=0.127  Sum_probs=83.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHC-CCCeEE-EEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          195 STVVIFGLGTVGLSVAQGAKAR-GASRII-GVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~-g~~~vi-~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      -+|.|+|.|.+|...+..++.. ++ +++ +.++++++.+.++++|+..   +    .++.+.+.   ...+|+|+.|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~~---~----~~~~~ll~---~~~~D~V~i~tp   74 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLKI---Y----ESYEAVLA---DEKVDAVLIATP   74 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCCB---C----SCHHHHHH---CTTCCEEEECSC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCce---e----CCHHHHhc---CCCCCEEEEcCC
Confidence            4688999999999888877766 66 565 4588888888777787631   2    23444443   237999999999


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCcee--cchhhhhc--CcEEEeeecCCCCCCCcHHHHHHHHHcCCC
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVA--AHYGLFLS--GRTLKGSLFGGWKPKTDLPSLVNRYLKKVR  342 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~--~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i  342 (353)
                      .....+.+..++..  |+-|++.-+-. .+..  .......+  ++.+.-.+...+  ...+..+.+++++|+|
T Consensus        75 ~~~h~~~~~~al~a--GkhVl~EKP~a-~~~~ea~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           75 NDSHKELAISALEA--GKHVVCEKPVT-MTSEDLLAIMDVAKRVNKHFMVHQNRRW--DEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESSCC-SSHHHHHHHHHHHHHHTCCEEEECGGGG--CHHHHHHHHHHHHTTT
T ss_pred             cHHHHHHHHHHHHC--CCCEEeeCCCc-CCHHHHHHHHHHHHHhCCeEEEEeeecc--CHHHHHHHHHHHcCCC
Confidence            87778888888886  55555643222 1111  01111222  444322221211  3568888999999887

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.09  E-value=0.009  Score=55.01  Aligned_cols=88  Identities=17%  Similarity=0.323  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++.++.+..+++|+..        .++.+.+.+     .|+|+-++.
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~--------~~l~ell~~-----aDvV~l~~P  209 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ--------VACSELFAS-----SDFILLALP  209 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE--------CCHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee--------CCHHHHHhh-----CCEEEEcCC
Confidence            47899999999999999999999999 9999998875555555666421        123333332     566666655


Q ss_pred             ChH----HH-HHHHHHhccCCceEEEEc
Q 018627          273 DTG----MI-TTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       273 ~~~----~~-~~~~~~l~~~~G~~v~~g  295 (353)
                      ...    .+ ...+..|+++ ..+|.++
T Consensus       210 ~t~~t~~li~~~~l~~mk~g-ailIN~a  236 (330)
T 4e5n_A          210 LNADTLHLVNAELLALVRPG-ALLVNPC  236 (330)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECS
T ss_pred             CCHHHHHHhCHHHHhhCCCC-cEEEECC
Confidence            211    11 3445566665 6666665

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.09  E-value=0.029  Score=52.00  Aligned_cols=91  Identities=20%  Similarity=0.342  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHH-HCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~-~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++|.|+|.|.+|..+++.++ ..|. +|++.+++.++.+.++++|+..+       .++.+.+.+     .|+|+.+
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~~-----aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV-------DSLEELARR-----SDCVSVS  227 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe-------CCHHHHhcc-----CCEEEEe
Confidence            35789999999999999999999 9999 99999988777666665664321       123333332     6777777


Q ss_pred             cCChH----HH-HHHHHHhccCCceEEEEcC
Q 018627          271 IGDTG----MI-TTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       271 ~g~~~----~~-~~~~~~l~~~~G~~v~~g~  296 (353)
                      +....    .+ ...+..++++ ..++.++.
T Consensus       228 vp~~~~t~~li~~~~l~~mk~g-ailin~sr  257 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPG-SRIVNTAR  257 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTT-EEEEECSC
T ss_pred             CCCChHHHHHhhHHHHhcCCCC-CEEEECCC
Confidence            65421    11 2345566664 66666553

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=96.09  E-value=0.011  Score=52.17  Aligned_cols=79  Identities=11%  Similarity=0.178  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH---CCCCeEEEEcCChhhHHHHHh-C-----CCce-E--eCCCCCCccHHHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKA---RGASRIIGVDTNPEKCEKAKA-F-----GVTE-F--LNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~---~g~~~vi~~~~~~~~~~~~~~-~-----G~~~-~--~~~~~~~~~~~~~~~~~  259 (353)
                      .++++||+|+ |++|.++++.+..   .|+ +|+++++++++.+.+.+ +     +... .  .|..+ ..++.+.+...
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~   82 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT-EAGVQRLLSAV   82 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS-HHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC-HHHHHHHHHHH
Confidence            4678999987 8999999988887   899 99999999877664422 2     3222 2  23321 22333333333


Q ss_pred             hc----CCcc--EEEeccCC
Q 018627          260 TD----GGAD--YSFECIGD  273 (353)
Q Consensus       260 ~~----~~~d--vv~d~~g~  273 (353)
                      ..    +.+|  ++++++|.
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCC
T ss_pred             HhccccccCCccEEEECCcc
Confidence            22    3678  99998873

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.08  E-value=0.014  Score=48.15  Aligned_cols=101  Identities=17%  Similarity=0.188  Sum_probs=67.5

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCC-ceEeCCCCCCccHHHHHHHHhc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV-TEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~-~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      +...+.++++||.+|+|. |..+..+++.. . +|++++.+++..+.+++    .+. ..+...   ..++.+.+..  .
T Consensus        27 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~---~~d~~~~~~~--~   98 (192)
T 1l3i_A           27 CLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEALCK--I   98 (192)
T ss_dssp             HHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHHHTT--S
T ss_pred             HhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEE---ecCHHHhccc--C
Confidence            455788999999999865 77777777765 4 99999999988887755    444 221111   1233332211  1


Q ss_pred             CCccEEEeccCC---hHHHHHHHHHhccCCceEEEEcC
Q 018627          262 GGADYSFECIGD---TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       262 ~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +.+|+|+.....   ...+..+.+.++++ |+++....
T Consensus        99 ~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~~  135 (192)
T 1l3i_A           99 PDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTAI  135 (192)
T ss_dssp             CCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             CCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEec
Confidence            379999965431   35677778889997 99887653

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.08  E-value=0.005  Score=53.92  Aligned_cols=99  Identities=21%  Similarity=0.275  Sum_probs=67.4

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc---eEeCCCCCCccHHHHHHH
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~---~~~~~~~~~~~~~~~~~~  258 (353)
                      .+...+.++.+||-+|+|. |..+..+++..+. +|++++.+++.++.+++    .|..   .++..+  ..++      
T Consensus        29 ~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d--~~~~------   98 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--AAGY------   98 (256)
T ss_dssp             HHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--CTTC------
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECC--hHhC------
Confidence            3556788999999999864 7778888888888 99999999988777744    3432   122111  1111      


Q ss_pred             HhcCCccEEEecc------CChHHHHHHHHHhccCCceEEEEc
Q 018627          259 ITDGGADYSFECI------GDTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       259 ~~~~~~dvv~d~~------g~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ..++.||+|+..-      .....+..+.+.|+|+ |+++...
T Consensus        99 ~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           99 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence            0134799998521      1234577778899997 9988764

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.08  E-value=0.022  Score=52.32  Aligned_cols=89  Identities=19%  Similarity=0.231  Sum_probs=60.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++.++.+.+.++|+...        ++.+.+.     ..|+|+.++.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l~-----~aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV--------STPELAA-----QSDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC--------CHHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC--------CHHHHHh-----hCCEEEEeCC
Confidence            47899999999999999999999999 89999888776666666664321        2333333     2677777775


Q ss_pred             ChH----HH-HHHHHHhccCCceEEEEcC
Q 018627          273 DTG----MI-TTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~~----~~-~~~~~~l~~~~G~~v~~g~  296 (353)
                      ...    .+ ...+..++++ ..++.++.
T Consensus       220 ~~~~t~~~i~~~~~~~mk~g-ailIn~sr  247 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKET-AVFINISR  247 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-CEEEECSC
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECCC
Confidence            421    12 3445666765 66666553

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.07  E-value=0.015  Score=52.48  Aligned_cols=77  Identities=14%  Similarity=0.226  Sum_probs=58.5

Q ss_pred             CCCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++++|+|.| .+|.-+++++...|+ +|+.+.+.                     ..++.+.++     .+|+||.+
T Consensus       163 l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~---------------------t~~L~~~~~-----~ADIVI~A  215 (301)
T 1a4i_A          163 IAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSK---------------------TAHLDEEVN-----KGDILVVA  215 (301)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT---------------------CSSHHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEECC---------------------cccHHHHhc-----cCCEEEEC
Confidence            369999999997 589999999999999 88888532                     234444444     48999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|.+..+..  +.++++ ..++.+|...
T Consensus       216 vg~p~~I~~--~~vk~G-avVIDVgi~~  240 (301)
T 1a4i_A          216 TGQPEMVKG--EWIKPG-AIVIDCGINY  240 (301)
T ss_dssp             CCCTTCBCG--GGSCTT-CEEEECCCBC
T ss_pred             CCCcccCCH--HHcCCC-cEEEEccCCC
Confidence            998755433  347886 8999998753

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.07  E-value=0.023  Score=49.22  Aligned_cols=73  Identities=19%  Similarity=0.120  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      .+++|||+|+ |.+|..+++.+...  |. +|+++++++++.+.+ .-++..+ .|..  +   .+.+.+... ++|+||
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~--d---~~~~~~~~~-~~d~vi   74 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDIT--D---ADSINPAFQ-GIDALV   74 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTT--S---HHHHHHHHT-TCSEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCC--C---HHHHHHHHc-CCCEEE
Confidence            4688999998 99999999999888  77 999999988776543 1122222 1222  2   123333322 599999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      ++++.
T Consensus        75 ~~a~~   79 (253)
T 1xq6_A           75 ILTSA   79 (253)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            98873

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.06  E-value=0.03  Score=52.21  Aligned_cols=48  Identities=23%  Similarity=0.384  Sum_probs=41.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHH-HHhCCCc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVT  240 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~G~~  240 (353)
                      -.|++|+|+|.|.+|..+++.+...|+ +|++++++.++++. ++++|+.
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            478999999999999999999999999 89999999888764 4556754

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.06  E-value=0.012  Score=51.29  Aligned_cols=102  Identities=16%  Similarity=0.189  Sum_probs=66.8

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhC----CCceEeCCCCCCccHHHHHHHHhc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      +...+++|++||=+|+| .|..+..+|+..|. .+|++++.+++.++.+++.    +....+........   .. ....
T Consensus        71 ~~l~ikpG~~VldlG~G-~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~---~~-~~~~  145 (233)
T 4df3_A           71 IELPVKEGDRILYLGIA-SGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPE---KY-RHLV  145 (233)
T ss_dssp             SCCCCCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGG---GG-TTTC
T ss_pred             hhcCCCCCCEEEEecCc-CCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcc---cc-cccc
Confidence            45679999999999985 47777788887764 4899999999988877542    21111211110110   11 1122


Q ss_pred             CCccEEEeccCChH----HHHHHHHHhccCCceEEEE
Q 018627          262 GGADYSFECIGDTG----MITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       262 ~~~dvv~d~~g~~~----~~~~~~~~l~~~~G~~v~~  294 (353)
                      +.+|+||.....+.    .+..+...|+|+ |+++.+
T Consensus       146 ~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          146 EGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             CCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            37899887665432    456667889997 998875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=96.05  E-value=0.011  Score=55.94  Aligned_cols=84  Identities=20%  Similarity=0.198  Sum_probs=54.5

Q ss_pred             hccC-CCCCEEEEEcC-ChHHHHHHHHHHH-CCCCeEEEEcCChhh----------------HHHHHhCCCceE-e--CC
Q 018627          188 VADI-SKGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEK----------------CEKAKAFGVTEF-L--NP  245 (353)
Q Consensus       188 ~~~~-~~g~~vLV~Ga-g~vG~~a~~la~~-~g~~~vi~~~~~~~~----------------~~~~~~~G~~~~-~--~~  245 (353)
                      ...+ +.++++||+|+ +++|++.+..+.. .|+ +|++++++.+.                .+.+++.|.... +  |.
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv  132 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA  132 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence            3445 45789999997 8999999988888 999 88888776532                144566675442 2  22


Q ss_pred             CCCCccHH---HHHHHHhcCCccEEEeccCC
Q 018627          246 NDNNEPVQ---QVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       246 ~~~~~~~~---~~~~~~~~~~~dvv~d~~g~  273 (353)
                      .+ .....   +.+.+..++++|++++++|.
T Consensus       133 td-~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          133 FS-DAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             TS-HHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CC-HHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            21 22222   23333332689999999875

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.05  E-value=0.061  Score=47.67  Aligned_cols=90  Identities=19%  Similarity=0.265  Sum_probs=62.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      .+|||+|+|.+|..++..+...|. +|+++++++++.+.+...++..+. |..  +  +.       -.++|+||.+++.
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~--d--~~-------~~~~d~vi~~a~~   73 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLLWPGE--E--PS-------LDGVTHLLISTAP   73 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEESSSS--C--CC-------CTTCCEEEECCCC
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEEeccc--c--cc-------cCCCCEEEECCCc
Confidence            689999999999999999988898 999999999988888776654432 222  1  11       2379999999874


Q ss_pred             h----HHHHHHHHHhcc---CCceEEEEcC
Q 018627          274 T----GMITTALQSCCD---GWGLAVTLGV  296 (353)
Q Consensus       274 ~----~~~~~~~~~l~~---~~G~~v~~g~  296 (353)
                      .    ......++.++.   +-.++|.++.
T Consensus        74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           74 DSGGDPVLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             BTTBCHHHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             cccccHHHHHHHHHHHhhcCCceEEEEeec
Confidence            2    122333343332   1257887764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.05  E-value=0.0057  Score=53.69  Aligned_cols=90  Identities=22%  Similarity=0.271  Sum_probs=57.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHH--HHHHHHh---cCCccEEE
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ--QVIKRIT---DGGADYSF  268 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~--~~~~~~~---~~~~dvv~  268 (353)
                      +++||+|+ |++|.++++.+...|+ +|+++++++++.+.      .  +     ..++.  +.+.+..   .+++|++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~--~-----~~Dl~~~~~v~~~~~~~~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D--L-----STAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C--T-----TSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c--c-----ccCCCCHHHHHHHHHHhCCCCCEEE
Confidence            47899998 8999999999999999 89999888765321      0  1     11111  2222222   24789999


Q ss_pred             eccCChH------------------HHHHHHHHhcc-CCceEEEEcCCC
Q 018627          269 ECIGDTG------------------MITTALQSCCD-GWGLAVTLGVPK  298 (353)
Q Consensus       269 d~~g~~~------------------~~~~~~~~l~~-~~G~~v~~g~~~  298 (353)
                      +++|...                  ..+.++..+.+ +.|++|.+++..
T Consensus        68 ~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           68 LCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             ECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             ECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            9988532                  12333444433 138999998744

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=96.02  E-value=0.055  Score=49.10  Aligned_cols=88  Identities=18%  Similarity=0.309  Sum_probs=62.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|...   .    .+..+.+.     ..|+||.|+..+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~DvVi~av~~~   97 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---G----RTPAEVVS-----TCDITFACVSDP   97 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---C----SCHHHHHH-----HCSEEEECCSSH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---c----CCHHHHHh-----cCCEEEEeCCCH
Confidence            579999999999999998888898 8999999999988887777531   1    12333333     379999999865


Q ss_pred             HHHHHHHH-------HhccCCceEEEEcC
Q 018627          275 GMITTALQ-------SCCDGWGLAVTLGV  296 (353)
Q Consensus       275 ~~~~~~~~-------~l~~~~G~~v~~g~  296 (353)
                      ......+.       .+.++ ..++.++.
T Consensus        98 ~~~~~v~~~~~~~~~~l~~~-~~vv~~s~  125 (316)
T 2uyy_A           98 KAAKDLVLGPSGVLQGIRPG-KCYVDMST  125 (316)
T ss_dssp             HHHHHHHHSTTCGGGGCCTT-CEEEECSC
T ss_pred             HHHHHHHcCchhHhhcCCCC-CEEEECCC
Confidence            55555553       24453 55665653

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.02  E-value=0.033  Score=49.87  Aligned_cols=73  Identities=22%  Similarity=0.324  Sum_probs=53.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG  275 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~  275 (353)
                      +|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+...       .+..+.+..     .|+||-|+..+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~~-----advvi~~v~~~~   69 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA-------SSPAEVCAA-----CDITIAMLADPA   69 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC-------SCHHHHHHH-----CSEEEECCSSHH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHHHc-----CCEEEEEcCCHH
Confidence            68899999999999988888898 89999999999888877775321       223333332     678888887654


Q ss_pred             HHHHHH
Q 018627          276 MITTAL  281 (353)
Q Consensus       276 ~~~~~~  281 (353)
                      .+...+
T Consensus        70 ~~~~v~   75 (287)
T 3pdu_A           70 AAREVC   75 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            444443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=96.01  E-value=0.018  Score=51.11  Aligned_cols=81  Identities=17%  Similarity=0.187  Sum_probs=51.6

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh-
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~-  260 (353)
                      ...++++||+|+ |++|.++++.+...|+ +|+++ .++.++.+.+    ++.+... .+  |..+ ..++.+.+.+.. 
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~  100 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN-AADIAAMFSAVDR  100 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHH
Confidence            356789999998 8999999999999999 77665 7777665543    3334332 22  2221 222333333321 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++|+++|.
T Consensus       101 ~~g~id~li~nAg~  114 (272)
T 4e3z_A          101 QFGRLDGLVNNAGI  114 (272)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             hCCCCCEEEECCCC
Confidence             1379999999873

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.01  E-value=0.0085  Score=49.71  Aligned_cols=99  Identities=16%  Similarity=0.149  Sum_probs=64.8

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce--EeCCCCCCccHHHHHHHHhcC
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~--~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ..++++++||-+|+| .|..+..+++. +. +|++++.+++.++.+++    .|...  ++. . ...    .+....++
T Consensus        18 ~~~~~~~~vLDiGcG-~G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~-~~~----~l~~~~~~   88 (185)
T 3mti_A           18 EVLDDESIVVDATMG-NGNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-D-GHE----NLDHYVRE   88 (185)
T ss_dssp             TTCCTTCEEEESCCT-TSHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-S-CGG----GGGGTCCS
T ss_pred             HhCCCCCEEEEEcCC-CCHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-C-cHH----HHHhhccC
Confidence            457889999999886 37777777777 66 99999999988877754    34322  221 1 111    11122244


Q ss_pred             CccEEEeccCC-----------h----HHHHHHHHHhccCCceEEEEcCC
Q 018627          263 GADYSFECIGD-----------T----GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       263 ~~dvv~d~~g~-----------~----~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .||+|+-+.+.           .    ..+..+.+.|+|+ |+++.+...
T Consensus        89 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~  137 (185)
T 3mti_A           89 PIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIYY  137 (185)
T ss_dssp             CEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC-
T ss_pred             CcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEeC
Confidence            79998866321           1    2357777899997 999887654

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.01  E-value=0.0075  Score=52.20  Aligned_cols=102  Identities=14%  Similarity=0.161  Sum_probs=66.9

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC--CceE--eCCCCCCccHHHHHHHHhcC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTEF--LNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G--~~~~--~~~~~~~~~~~~~~~~~~~~  262 (353)
                      +...++++++||-+|+|. |..+..+++..+..+|++++.+++.++.+++.-  ...+  +..+  ....... .. ..+
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d--~~~~~~~-~~-~~~  142 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGD--ANKPQEY-AN-IVE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECC--TTCGGGG-TT-TSC
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECC--CCCcccc-cc-cCc
Confidence            345677899999999875 788888888876449999999998887765421  1111  1111  1110000 01 124


Q ss_pred             CccEEEeccCCh----HHHHHHHHHhccCCceEEEE
Q 018627          263 GADYSFECIGDT----GMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       263 ~~dvv~d~~g~~----~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .||+|+..+..+    ..+..+.+.|+++ |+++.+
T Consensus       143 ~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cEEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            799999766554    3377788899997 999885

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.00  E-value=0.016  Score=54.48  Aligned_cols=90  Identities=16%  Similarity=0.074  Sum_probs=59.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++.+|. +|++.+++.++.+..+++|+...       .++.+.+.     ..|+|+.++.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l~ell~-----~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATREDMYP-----VCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHGG-----GCSEEEECSC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCHHHHHh-----cCCEEEEecC
Confidence            58899999999999999999999999 99999888766666666665421       11222221     3667776665


Q ss_pred             Ch----HHH-HHHHHHhccCCceEEEEcC
Q 018627          273 DT----GMI-TTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~----~~~-~~~~~~l~~~~G~~v~~g~  296 (353)
                      ..    ..+ ...+..|+++ ..+|.++.
T Consensus       257 lt~~t~~li~~~~l~~mk~g-ailIN~aR  284 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRG-AYIVNTAR  284 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CchHHHHHhhHHHHhhCCCC-CEEEECCC
Confidence            31    112 3444566664 66666653

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.00  E-value=0.029  Score=48.83  Aligned_cols=103  Identities=16%  Similarity=0.182  Sum_probs=66.8

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh---
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT---  260 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~---  260 (353)
                      ....++++||-+|+| .|..++.+++.+. -.+|++++.+++..+.+++    .|...-+...  ..+..+.+..+.   
T Consensus        66 ~~~~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~--~gda~~~l~~l~~~~  142 (237)
T 3c3y_A           66 LKLVNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFI--ESDAMLALDNLLQGQ  142 (237)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHST
T ss_pred             HHhhCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHhcc
Confidence            344677899999875 5777778888763 2399999999998877754    4653211111  123333443332   


Q ss_pred             --cCCccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          261 --DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       261 --~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                        .+.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~  181 (237)
T 3c3y_A          143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN  181 (237)
T ss_dssp             TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence              3489999854432   34577888999997 9887643

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.00  E-value=0.023  Score=50.49  Aligned_cols=93  Identities=12%  Similarity=0.210  Sum_probs=65.6

Q ss_pred             hchhhhHHHHHHHHhccCCCCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccH
Q 018627          174 LSCGLSAGLGAAWNVADISKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV  252 (353)
Q Consensus       174 l~~~~~ta~~al~~~~~~~~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~  252 (353)
                      +||+.......+ +..+ -.|++++|+|.| .+|..+++++...|+ +|+.+.+.                     ..++
T Consensus       132 ~PcTp~gv~~lL-~~~~-l~Gk~vvVvG~s~iVG~plA~lL~~~gA-tVtv~~~~---------------------t~~L  187 (276)
T 3ngx_A          132 VPATPRAVIDIM-DYYG-YHENTVTIVNRSPVVGRPLSMMLLNRNY-TVSVCHSK---------------------TKDI  187 (276)
T ss_dssp             CCHHHHHHHHHH-HHHT-CCSCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTT---------------------CSCH
T ss_pred             CCCcHHHHHHHH-HHhC-cCCCEEEEEcCChHHHHHHHHHHHHCCC-eEEEEeCC---------------------cccH
Confidence            343333333334 3344 689999999985 599999999999999 88888542                     2345


Q ss_pred             HHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       253 ~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .+.+++     +|++|.++|.+..+..  ..++++ ..++.+|...
T Consensus       188 ~~~~~~-----ADIVI~Avg~p~~I~~--~~vk~G-avVIDvgi~~  225 (276)
T 3ngx_A          188 GSMTRS-----SKIVVVAVGRPGFLNR--EMVTPG-SVVIDVGINY  225 (276)
T ss_dssp             HHHHHH-----SSEEEECSSCTTCBCG--GGCCTT-CEEEECCCEE
T ss_pred             HHhhcc-----CCEEEECCCCCccccH--hhccCC-cEEEEeccCc
Confidence            555554     8999999998655443  457886 8888998653

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.99  E-value=0.028  Score=50.45  Aligned_cols=75  Identities=20%  Similarity=0.276  Sum_probs=50.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hC----CCce-EeCCCCCCccHHHHHHHHhcCCc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF----GVTE-FLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~----G~~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      -.|+++||+|+ |++|.+++..+...|+ +|++++++.++.+.+. ++    ++.. ..+..  +.   +.+.+... .+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~--~~---~~~~~~~~-~~  189 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA--DD---ASRAEAVK-GA  189 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC--SH---HHHHHHTT-TC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCC--CH---HHHHHHHH-hC
Confidence            36899999994 9999999999999999 7999999987766442 22    2221 12322  11   12333222 48


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++++++|.
T Consensus       190 DvlVn~ag~  198 (287)
T 1lu9_A          190 HFVFTAGAI  198 (287)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEECCCc
Confidence            999999973

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=95.98  E-value=0.015  Score=49.73  Aligned_cols=103  Identities=16%  Similarity=0.171  Sum_probs=67.1

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc--
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~--  261 (353)
                      ....++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++    .|...-+...  ..+..+.+.....  
T Consensus        60 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~--~~d~~~~~~~~~~~~  136 (225)
T 3tr6_A           60 VKLMQAKKVIDIGTF-TGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLR--LSPAKDTLAELIHAG  136 (225)
T ss_dssp             HHHHTCSEEEEECCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHTTT
T ss_pred             HHhhCCCEEEEeCCc-chHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEE--eCCHHHHHHHhhhcc
Confidence            345678899999886 4777888888763 3499999999988877654    4543211111  1233344433322  


Q ss_pred             --CCccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          262 --GGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       262 --~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                        +.||+||-....   ...+..+.+.|+++ |.++.-.
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  174 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDN  174 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence              579999854432   24567888999997 9998654

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.98  E-value=0.02  Score=51.28  Aligned_cols=77  Identities=17%  Similarity=0.332  Sum_probs=58.9

Q ss_pred             CCCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++++|+|.| .+|.-+++++...|+ +|+.+.+.                     ..++.+.+++     +|+||.+
T Consensus       157 l~gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~---------------------t~~L~~~~~~-----ADIVI~A  209 (288)
T 1b0a_A          157 TFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRF---------------------TKNLRHHVEN-----ADLLIVA  209 (288)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSS---------------------CSCHHHHHHH-----CSEEEEC
T ss_pred             CCCCEEEEECCChHHHHHHHHHHHHCCC-eEEEEeCC---------------------chhHHHHhcc-----CCEEEEC
Confidence            479999999997 589999999999999 88888432                     2345556654     8999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|.+..+..  +.++++ ..++.+|...
T Consensus       210 vg~p~lI~~--~~vk~G-avVIDVgi~r  234 (288)
T 1b0a_A          210 VGKPGFIPG--DWIKEG-AIVIDVGINR  234 (288)
T ss_dssp             SCCTTCBCT--TTSCTT-CEEEECCCEE
T ss_pred             CCCcCcCCH--HHcCCC-cEEEEccCCc
Confidence            998755433  346886 8888998653

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.96  E-value=0.013  Score=51.57  Aligned_cols=77  Identities=21%  Similarity=0.356  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-Ee--CCCCCCccHHHHHHHH-hcCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FL--NPNDNNEPVQQVIKRI-TDGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~--~~~~~~~~~~~~~~~~-~~~~~dvv  267 (353)
                      .++++||+|+ +++|.++++.+...|+ +|++++++.++  ..++++... .+  |..+ ..++.+.+... ..+++|++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~g~id~l   83 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTD-EAAVASALDLAETMGTLRIV   83 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTC-HHHHHHHHHHHHHHSCEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhCCCCEE
Confidence            4789999998 8999999999999999 89888875443  344455333 22  3321 22222222211 12489999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      ++++|.
T Consensus        84 v~nAg~   89 (257)
T 3tl3_A           84 VNCAGT   89 (257)
T ss_dssp             EECGGG
T ss_pred             EECCCC
Confidence            999983

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.96  E-value=0.068  Score=48.41  Aligned_cols=91  Identities=20%  Similarity=0.183  Sum_probs=64.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      ...+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+..       ..+..+.+..     .|+||-++.
T Consensus         8 ~~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-------~~~~~e~~~~-----aDvVi~~vp   74 (306)
T 3l6d_A            8 FEFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHL-------CESVKAALSA-----SPATIFVLL   74 (306)
T ss_dssp             CSCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEE-------CSSHHHHHHH-----SSEEEECCS
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-------cCCHHHHHhc-----CCEEEEEeC
Confidence            34679999999999999999999998 8999999999998887777532       1233444443     789999998


Q ss_pred             ChHHHHHHH-----HHhccCCceEEEEcCC
Q 018627          273 DTGMITTAL-----QSCCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~~~~~~~~-----~~l~~~~G~~v~~g~~  297 (353)
                      .+......+     ..+.++ ..++.++..
T Consensus        75 ~~~~~~~v~~~~~l~~~~~g-~ivid~st~  103 (306)
T 3l6d_A           75 DNHATHEVLGMPGVARALAH-RTIVDYTTN  103 (306)
T ss_dssp             SHHHHHHHHTSTTHHHHTTT-CEEEECCCC
T ss_pred             CHHHHHHHhcccchhhccCC-CEEEECCCC
Confidence            755444433     334554 566666543

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.96  E-value=0.021  Score=50.84  Aligned_cols=101  Identities=16%  Similarity=0.133  Sum_probs=68.0

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHh----C-CCce--EeCCCCCCccHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----F-GVTE--FLNPNDNNEPVQQV  255 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~-G~~~--~~~~~~~~~~~~~~  255 (353)
                      +.+...++++++||-.|+| .|..+..+++..  +. +|++++.+++..+.+++    . |...  ++..+     +.+ 
T Consensus       102 ~~~~~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d-----~~~-  173 (275)
T 1yb2_A          102 IIMRCGLRPGMDILEVGVG-SGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSD-----IAD-  173 (275)
T ss_dssp             ----CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSC-----TTT-
T ss_pred             HHHHcCCCCcCEEEEecCC-CCHHHHHHHHHcCCCC-EEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECc-----hhc-
Confidence            3355678899999999886 566777777763  45 99999999998887755    2 5332  22211     111 


Q ss_pred             HHHHhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEcC
Q 018627          256 IKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       256 ~~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                        ...++.||+|+-....+ ..+..+.+.|+++ |+++....
T Consensus       174 --~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          174 --FISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             --CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             --cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence              11224799999866543 5678888999997 99988764

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=95.95  E-value=0.033  Score=50.76  Aligned_cols=92  Identities=22%  Similarity=0.247  Sum_probs=64.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+|.|+|.|.+|.+.++.++..|.. +|++.++++++.+.+++.|+.. ....   ..++  .+     ...|+||-|+.
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~---~~~~--~~-----~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS---IAKV--ED-----FSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC---TTGG--GG-----GCCSEEEECSC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCC---HHHH--hh-----ccCCEEEEeCC
Confidence            6899999999999999999998864 7999999999999999888642 2211   1110  11     25899999987


Q ss_pred             ChH---HHHHHHHHhccCCceEEEEcCC
Q 018627          273 DTG---MITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~~---~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ...   .+......++++ ..++.++..
T Consensus       104 ~~~~~~vl~~l~~~l~~~-~iv~d~~Sv  130 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSED-ATVTDQGSV  130 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             HHHHHHHHHHHhhccCCC-cEEEECCCC
Confidence            632   233333456664 666666654

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.94  E-value=0.016  Score=51.81  Aligned_cols=81  Identities=19%  Similarity=0.261  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcC-Ch--HHHHHHHHHHHCCCCeEEEEcCCh--hhHHHHHh-CCCceEeCCCCCC-ccHHHHHHHHh--cC
Q 018627          192 SKGSTVVIFGL-GT--VGLSVAQGAKARGASRIIGVDTNP--EKCEKAKA-FGVTEFLNPNDNN-EPVQQVIKRIT--DG  262 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~--vG~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~-~G~~~~~~~~~~~-~~~~~~~~~~~--~~  262 (353)
                      -.++++||+|+ |.  +|.++++.+...|+ +|++++++.  +..+.+.+ .+-...+..+-.+ .++.+.+.+..  -+
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            35789999985 44  99999999999999 899998887  55555543 3322332222112 23333333321  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++++++|.
T Consensus       103 ~id~li~nAg~  113 (280)
T 3nrc_A          103 GLDAIVHSIAF  113 (280)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.93  E-value=0.023  Score=50.13  Aligned_cols=82  Identities=15%  Similarity=0.230  Sum_probs=52.6

Q ss_pred             CCCCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCC-ccHHHHHHHHh--
Q 018627          191 ISKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNN-EPVQQVIKRIT--  260 (353)
Q Consensus       191 ~~~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~-~~~~~~~~~~~--  260 (353)
                      ...+++|||+|+   +++|.++++.+...|+ +|++++++++..+.+    ++.+....+..+-.+ .++.+.+.+..  
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            456899999984   5899999999999999 899998876544433    334433333222112 23333333321  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      .+++|++|+++|.
T Consensus        90 ~g~id~lv~nAg~  102 (271)
T 3ek2_A           90 WDSLDGLVHSIGF  102 (271)
T ss_dssp             CSCEEEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence            2479999999873

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=95.92  E-value=0.018  Score=49.35  Aligned_cols=99  Identities=15%  Similarity=0.157  Sum_probs=66.5

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CCC-----ce--EeCCCCCCccHHHHHH
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGV-----TE--FLNPNDNNEPVQQVIK  257 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G~-----~~--~~~~~~~~~~~~~~~~  257 (353)
                      .++++++||-+|+|. |..+..+++..|. .+|++++.+++.++.+++    .|.     ..  ++..+     ....  
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d-----~~~~--  145 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD-----GRMG--  145 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC-----GGGC--
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECC-----cccC--
Confidence            378899999999864 7777788877653 289999999998887754    221     11  22111     1000  


Q ss_pred             HHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          258 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ....+.||+|+........+..+.+.|+++ |+++..-..
T Consensus       146 ~~~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~~  184 (226)
T 1i1n_A          146 YAEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPVGP  184 (226)
T ss_dssp             CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEESC
T ss_pred             cccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEec
Confidence            011347999987766556678888999997 998876443

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=95.91  E-value=0.012  Score=52.28  Aligned_cols=96  Identities=14%  Similarity=0.187  Sum_probs=59.6

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          196 TVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +|||+|+ |.+|..+++.+...  |. +|+++++++++.+.+...++..+. |..  +   .+.+.+... ++|+||.++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~D~~--d---~~~~~~~~~-~~d~vi~~a   73 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVRQADYG--D---EAALTSALQ-GVEKLLLIS   73 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEEECCTT--C---HHHHHHHTT-TCSEEEECC
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEEEcCCC--C---HHHHHHHHh-CCCEEEEeC
Confidence            4899998 99999999988887  88 899988888776655555544322 222  2   123333332 589999998


Q ss_pred             CCh-----HHHHHHHHHhccC-CceEEEEcCCC
Q 018627          272 GDT-----GMITTALQSCCDG-WGLAVTLGVPK  298 (353)
Q Consensus       272 g~~-----~~~~~~~~~l~~~-~G~~v~~g~~~  298 (353)
                      +..     ......++.+... -+++|.++...
T Consensus        74 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           74 SSEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             --------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            742     1223334444332 15888887643

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.91  E-value=0.032  Score=51.06  Aligned_cols=89  Identities=17%  Similarity=0.263  Sum_probs=61.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.++ +.++ +.++++|+.. .      .++.+.+.     ..|+|+-++
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~-~------~~l~ell~-----~aDvVil~~  210 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF-H------DSLDSLLS-----VSQFFSLNA  210 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE-C------SSHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE-c------CCHHHHHh-----hCCEEEEec
Confidence            57899999999999999999999999 9999988 7665 3455566531 1      12333333     267888777


Q ss_pred             CChH----HH-HHHHHHhccCCceEEEEcC
Q 018627          272 GDTG----MI-TTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       272 g~~~----~~-~~~~~~l~~~~G~~v~~g~  296 (353)
                      ....    .+ ...+..++++ ..++.++.
T Consensus       211 p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          211 PSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             CCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             cCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            6321    12 3355667775 77777764

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.88  E-value=0.08  Score=45.71  Aligned_cols=96  Identities=15%  Similarity=0.100  Sum_probs=65.4

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .++++++||-+|+| .|..+..+++. |+ +|++++.+++..+.+++.  ..++.     .+..+.+....++.||+|+.
T Consensus        38 ~~~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~-----~d~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIGCG-RGEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVK-----SDAIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEETCT-TTHHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEEC-----SCHHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEeCC-CCHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceee-----ccHHHHhhhcCCCCeeEEEE
Confidence            36788999999875 34455555555 87 899999999999998876  23332     23333333333458999986


Q ss_pred             cc-----CC---hHHHHHHHHHhccCCceEEEEcC
Q 018627          270 CI-----GD---TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       270 ~~-----g~---~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ..     ..   ...+....+.|+++ |+++....
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  141 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIESP  141 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence            32     21   25677888899997 99887643

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.85  E-value=0.021  Score=49.87  Aligned_cols=40  Identities=23%  Similarity=0.319  Sum_probs=32.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHH
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCE  232 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~  232 (353)
                      -.++++||+|+ +++|.++++.+...|+ +|+++ .+++++.+
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~   46 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAE   46 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCSHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchHHHH
Confidence            35789999997 8999999999999999 77664 66655544

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.84  E-value=0.029  Score=52.24  Aligned_cols=87  Identities=23%  Similarity=0.301  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++. +.+.+++.|+..        .++.+.++     ..|+|+-++.
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~--------~~l~ell~-----~aDvV~l~~P  239 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP--------ASLEDVLT-----KSDFIFVVAA  239 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE--------CCHHHHHH-----SCSEEEECSC
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee--------CCHHHHHh-----cCCEEEEcCc
Confidence            37899999999999999999999999 999998875 445555667531        12333333     3788887665


Q ss_pred             ChH----HH-HHHHHHhccCCceEEEEc
Q 018627          273 DTG----MI-TTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       273 ~~~----~~-~~~~~~l~~~~G~~v~~g  295 (353)
                      ...    .+ ...+..|+++ ..+|.++
T Consensus       240 lt~~T~~li~~~~l~~mk~g-ailIN~a  266 (365)
T 4hy3_A          240 VTSENKRFLGAEAFSSMRRG-AAFILLS  266 (365)
T ss_dssp             SSCC---CCCHHHHHTSCTT-CEEEECS
T ss_pred             CCHHHHhhcCHHHHhcCCCC-cEEEECc
Confidence            321    11 4556777886 7788777

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.83  E-value=0.027  Score=50.33  Aligned_cols=77  Identities=19%  Similarity=0.302  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++++|+|.| .+|..++.++...|+ +|+.+.+..                     .++.+.++     .+|++|.+
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t---------------------~~L~~~~~-----~ADIVI~A  210 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKT---------------------KDLSLYTR-----QADLIIVA  210 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------SCHHHHHT-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCc---------------------hhHHHHhh-----cCCEEEEC
Confidence            479999999985 589999999999999 888885421                     23444443     48999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|.+..+..  +.++++ ..++.+|...
T Consensus       211 vg~p~~I~~--~~vk~G-avVIDVgi~~  235 (285)
T 3p2o_A          211 AGCVNLLRS--DMVKEG-VIVVDVGINR  235 (285)
T ss_dssp             SSCTTCBCG--GGSCTT-EEEEECCCEE
T ss_pred             CCCCCcCCH--HHcCCC-eEEEEeccCc
Confidence            998655433  457886 8888998653

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.83  E-value=0.096  Score=46.98  Aligned_cols=87  Identities=22%  Similarity=0.377  Sum_probs=61.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|...   .    .+..+.+.     ..|+||-|++.+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~D~vi~~vp~~   71 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA---C----ENNQKVAA-----ASDIIFTSLPNA   71 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE---C----SSHHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh-----CCCEEEEECCCH
Confidence            579999999999999988888898 8999999999988887766431   1    22333333     279999998765


Q ss_pred             HHHHHHH-------HHhccCCceEEEEc
Q 018627          275 GMITTAL-------QSCCDGWGLAVTLG  295 (353)
Q Consensus       275 ~~~~~~~-------~~l~~~~G~~v~~g  295 (353)
                      ......+       ..++++ ..++.+.
T Consensus        72 ~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           72 GIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            5444444       345554 5555554

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.79  E-value=0.0052  Score=56.10  Aligned_cols=98  Identities=13%  Similarity=0.215  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhH-HHHHhCCCc--eEeCCC-CCCccHHHHHHHHhcCCccE
Q 018627          192 SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKC-EKAKAFGVT--EFLNPN-DNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       192 ~~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~-~~~~~~G~~--~~~~~~-~~~~~~~~~~~~~~~~~~dv  266 (353)
                      -.|++++|+|+| .+|..+++++...|+ +|++++++..+. +...+++..  ...... ....++.+.+++     +|+
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gA-tVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~-----ADI  248 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGA-TVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLD-----SDV  248 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSC-EEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHH-----CSE
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCC-EEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhcc-----CCE
Confidence            368999999997 579999999999999 899887763321 111223221  100000 001345555554     999


Q ss_pred             EEeccCChHH-HHHHHHHhccCCceEEEEcCCC
Q 018627          267 SFECIGDTGM-ITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       267 v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ||.++|.+.. +...  .++++ ..++++|...
T Consensus       249 VIsAtg~p~~vI~~e--~vk~G-avVIDVgi~r  278 (320)
T 1edz_A          249 VITGVPSENYKFPTE--YIKEG-AVCINFACTK  278 (320)
T ss_dssp             EEECCCCTTCCBCTT--TSCTT-EEEEECSSSC
T ss_pred             EEECCCCCcceeCHH--HcCCC-eEEEEcCCCc
Confidence            9999998654 4333  36886 7888998753

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.79  E-value=0.039  Score=49.34  Aligned_cols=77  Identities=17%  Similarity=0.303  Sum_probs=58.4

Q ss_pred             CCCCEEEEEcCC-hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag-~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++++|+|.| .+|..++.++...|+ +|+.+.+.                     ..++.+.++     .+|++|.+
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~---------------------T~~L~~~~~-----~ADIVI~A  211 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRF---------------------TRDLADHVS-----RADLVVVA  211 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTT---------------------CSCHHHHHH-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCC---------------------CcCHHHHhc-----cCCEEEEC
Confidence            379999999974 599999999999999 88887432                     123444554     38999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|.+..+..  +.++++ ..++.+|...
T Consensus       212 vg~p~~I~~--~~vk~G-avVIDvgi~~  236 (286)
T 4a5o_A          212 AGKPGLVKG--EWIKEG-AIVIDVGINR  236 (286)
T ss_dssp             CCCTTCBCG--GGSCTT-CEEEECCSCS
T ss_pred             CCCCCCCCH--HHcCCC-eEEEEecccc
Confidence            998655433  457886 8889998754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.77  E-value=0.048  Score=50.10  Aligned_cols=75  Identities=13%  Similarity=0.162  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhC----CCceE-eCCCCCCccHHHHHHHHhcC-Cc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF----GVTEF-LNPNDNNEPVQQVIKRITDG-GA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~----G~~~~-~~~~~~~~~~~~~~~~~~~~-~~  264 (353)
                      .+.+|||+|+ |.+|..+++.+...|. +|++++++.++.+.+ +.+    ++..+ .|..  +.   +.+.+...+ .+
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~---~~~~~~~~~~~~   81 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIR--DQ---NKLLESIREFQP   81 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTT--CH---HHHHHHHHHHCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEcccc--CH---HHHHHHHHhcCC
Confidence            3678999998 9999999999999998 899998876553322 211    22221 1222  21   223332223 68


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+||.+++.
T Consensus        82 d~vih~A~~   90 (357)
T 1rkx_A           82 EIVFHMAAQ   90 (357)
T ss_dssp             SEEEECCSC
T ss_pred             CEEEECCCC
Confidence            999999883

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.77  E-value=0.0077  Score=53.33  Aligned_cols=76  Identities=14%  Similarity=0.230  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYSF  268 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv~  268 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+..   .+..+ .|..+ ..++.+.+.+..  -+++|+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DIHTVAGDISK-PETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TEEEEESCTTS-HHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ceEEEEccCCC-HHHHHHHHHHHHHHCCCCCEEE
Confidence            5789999997 8999999999999999 999998876653221   11111 13221 223333333221  23799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus       102 ~nAg~  106 (260)
T 3un1_A          102 NNAGV  106 (260)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=95.77  E-value=0.012  Score=50.91  Aligned_cols=101  Identities=15%  Similarity=0.172  Sum_probs=59.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .+++|||+|+ |.+|..+++.+...|+. +|+++++++++.+....-++..+ .|..  +.   +.+.+.. .++|++|+
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~--d~---~~~~~~~-~~~d~vi~   90 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE--KL---DDYASAF-QGHDVGFC   90 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGG--GG---GGGGGGG-SSCSEEEE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcC--CH---HHHHHHh-cCCCEEEE
Confidence            3678999997 99999999988888863 68888787765432211122221 1221  11   1222222 26999999


Q ss_pred             ccCChHH--------------HHHHHHHhccC-CceEEEEcCCCC
Q 018627          270 CIGDTGM--------------ITTALQSCCDG-WGLAVTLGVPKL  299 (353)
Q Consensus       270 ~~g~~~~--------------~~~~~~~l~~~-~G~~v~~g~~~~  299 (353)
                      ++|....              ....++.+.+. .+++|.+++...
T Consensus        91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~  135 (242)
T 2bka_A           91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA  135 (242)
T ss_dssp             CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             CCCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence            9985321              12223333332 268999887544

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=95.76  E-value=0.053  Score=49.05  Aligned_cols=100  Identities=17%  Similarity=0.159  Sum_probs=68.0

Q ss_pred             Hhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc---eEeCCCCCCccHHHHHHH
Q 018627          187 NVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       187 ~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~---~~~~~~~~~~~~~~~~~~  258 (353)
                      +... ++++++||-+|+| .|..+..+++..++ +|++++.+++.++.+++    .|..   .++..+  ..++     .
T Consensus       110 ~~l~~~~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~-----~  180 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCG-RGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCN--MLDT-----P  180 (312)
T ss_dssp             TTSCCCCTTCEEEEESCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC--TTSC-----C
T ss_pred             HHhccCCCCCEEEEecCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECC--hhcC-----C
Confidence            4444 7889999999986 37777778877687 99999999998877754    4432   122111  1110     0


Q ss_pred             HhcCCccEEEec-----cCChHHHHHHHHHhccCCceEEEEcC
Q 018627          259 ITDGGADYSFEC-----IGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       259 ~~~~~~dvv~d~-----~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ..++.||+|+..     ++....+..+.+.|+++ |+++.+..
T Consensus       181 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          181 FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            123489999863     22246688888999997 99998764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.76  E-value=0.028  Score=48.87  Aligned_cols=65  Identities=22%  Similarity=0.345  Sum_probs=44.4

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccH--HHHHHHHh---cCCccEEE
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV--QQVIKRIT---DGGADYSF  268 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~--~~~~~~~~---~~~~dvv~  268 (353)
                      ++|||+|+ |.+|..++..+...|+ +|+++++++++.+.      .    .   ..++  .+.+.+..   .+++|++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~----~---~~D~~~~~~~~~~~~~~~~~~d~vi   67 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------D----L---STPGGRETAVAAVLDRCGGVLDGLV   67 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C----T---TSHHHHHHHHHHHHHHHTTCCSEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------c----c---cCCcccHHHHHHHHHHcCCCccEEE
Confidence            47999998 9999999999988999 89999887664321      0    1   1111  11222222   25799999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      +++|.
T Consensus        68 ~~Ag~   72 (255)
T 2dkn_A           68 CCAGV   72 (255)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.75  E-value=0.033  Score=54.13  Aligned_cols=78  Identities=17%  Similarity=0.303  Sum_probs=52.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh-------hHHHHHhCCCceEe---CCCCCCccHHHHHHHHhc-C
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-------KCEKAKAFGVTEFL---NPNDNNEPVQQVIKRITD-G  262 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~-------~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~-~  262 (353)
                      +++||+|+ |++|..+++.+...|+++|+.+.++..       ..+.+++.|..-.+   |.. +...+.+.+.+... +
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvt-d~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAA-DREALAALLAELPEDA  318 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-CHHHHHHHHHTCCTTS
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCC-CHHHHHHHHHHHHHhC
Confidence            89999987 999999999988899978888877632       23344566754432   222 12233333443322 3


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++|++.|.
T Consensus       319 ~ld~vVh~AGv  329 (496)
T 3mje_A          319 PLTAVFHSAGV  329 (496)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCeEEEECCcc
Confidence            79999999884

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.75  E-value=0.054  Score=54.02  Aligned_cols=79  Identities=23%  Similarity=0.287  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh--hhHHHHHhCCCceEeCCCCCC-ccHHHHHHHHh--cCCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKAKAFGVTEFLNPNDNN-EPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~~--~~~~dv  266 (353)
                      .|+.+||+|+ +++|.+.++.+...|+ +|++.++..  +..+.+++.|...+....+ . .+..+.+.+..  -+.+|+
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~D-v~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGA-KVVVNDFKDATKTVDEIKAAGGEAWPDQHD-VAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHHTTCEEEEECCC-HHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCC-EEEEEeCccHHHHHHHHHhcCCeEEEEEcC-hHHHHHHHHHHHHHhcCCCCE
Confidence            4688999998 8999999999999999 888886432  2234455556543332221 1 12122222221  247999


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      +++++|.
T Consensus       399 LVnNAGi  405 (604)
T 2et6_A          399 LVNNAGI  405 (604)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=95.74  E-value=0.007  Score=52.20  Aligned_cols=101  Identities=15%  Similarity=0.156  Sum_probs=67.9

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC----CCceEeCCCCCCccHHHHHHHHhc
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      .+...+.++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++.    +...++..+     ..+.+  ...
T Consensus        63 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d-----~~~~~--~~~  132 (231)
T 1vbf_A           63 LDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGD-----GTLGY--EEE  132 (231)
T ss_dssp             HHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC-----GGGCC--GGG
T ss_pred             HHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECC-----ccccc--ccC
Confidence            3556788999999999874 77777777764 5 999999999998888663    211222111     11100  013


Q ss_pred             CCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          262 GGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       262 ~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +.||+|+....-........+.++++ |+++..-..
T Consensus       133 ~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~~  167 (231)
T 1vbf_A          133 KPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIGV  167 (231)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEECS
T ss_pred             CCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEcC
Confidence            47999997655444456778899997 998877543

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.73  E-value=0.1  Score=44.97  Aligned_cols=115  Identities=17%  Similarity=0.131  Sum_probs=67.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh-hHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .|++|||+|+|.+|...++.+...|+ .|++++.... .++.+.+.|-...+.....+.+         -.++|+||-++
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~d---------L~~adLVIaAT   99 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKRKKVGEED---------LLNVFFIVVAT   99 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEECSCCCGGG---------SSSCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEECCCCHhH---------hCCCCEEEECC
Confidence            57899999999999999999999999 7888755432 3333333343333322111111         12699999998


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhc-CcEEEeee
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLS-GRTLKGSL  320 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~g~~  320 (353)
                      +.+. .+..+....+. |..|.+-..+...++-+... +-+ .+.+--+.
T Consensus       100 ~d~~-~N~~I~~~ak~-gi~VNvvD~p~~~~f~~Pai-v~rg~l~iaIST  146 (223)
T 3dfz_A          100 NDQA-VNKFVKQHIKN-DQLVNMASSFSDGNIQIPAQ-FSRGRLSLAIST  146 (223)
T ss_dssp             CCTH-HHHHHHHHSCT-TCEEEC-----CCSEECCEE-EEETTEEEEEEC
T ss_pred             CCHH-HHHHHHHHHhC-CCEEEEeCCcccCeEEEeeE-EEeCCEEEEEEC
Confidence            8754 55555555555 98888876655445443333 223 55543333

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.73  E-value=0.047  Score=48.62  Aligned_cols=92  Identities=22%  Similarity=0.298  Sum_probs=61.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG  272 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g  272 (353)
                      .+|.|+|+|.+|.+.++.++..|.. +|+++++++++.+.+++.|...... .    +..+.+     . ..|+||.|+.
T Consensus         2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~-~----~~~~~~-----~~~aDvVilavp   71 (281)
T 2g5c_A            2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT-T----SIAKVE-----DFSPDFVMLSSP   71 (281)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE-S----CGGGGG-----GTCCSEEEECSC
T ss_pred             cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc-C----CHHHHh-----cCCCCEEEEcCC
Confidence            3689999999999999999888852 6999999999999888888642111 1    111111     2 5899999998


Q ss_pred             ChHH---HHHHHHHhccCCceEEEEcCC
Q 018627          273 DTGM---ITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~~~---~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ....   +......++++ ..++.++..
T Consensus        72 ~~~~~~v~~~l~~~l~~~-~iv~~~~~~   98 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSED-ATVTDQGSV   98 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             HHHHHHHHHHHHhhCCCC-cEEEECCCC
Confidence            6432   22223345664 666666543

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.71  E-value=0.022  Score=49.44  Aligned_cols=79  Identities=16%  Similarity=0.171  Sum_probs=50.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCC------eEEEEcCChhhHHHHHh----CCCce-Ee--CCCCCCccHHHHHHHH
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGAS------RIIGVDTNPEKCEKAKA----FGVTE-FL--NPNDNNEPVQQVIKRI  259 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~------~vi~~~~~~~~~~~~~~----~G~~~-~~--~~~~~~~~~~~~~~~~  259 (353)
                      ++++||+|+ |++|..+++.+...|+.      +|+++++++++.+.+.+    .+... .+  |..+ ...+.+.+...
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~   80 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHI   80 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCC-HHHHHHHHHHH
Confidence            568999998 89999999988888874      78888898877654422    24322 22  3221 22233333322


Q ss_pred             h--cCCccEEEeccCC
Q 018627          260 T--DGGADYSFECIGD  273 (353)
Q Consensus       260 ~--~~~~dvv~d~~g~  273 (353)
                      .  .+++|++|+++|.
T Consensus        81 ~~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHHTSCCSEEEECCCC
T ss_pred             HHhCCCCCEEEEcCCc
Confidence            1  2479999999873

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=95.71  E-value=0.062  Score=43.38  Aligned_cols=101  Identities=21%  Similarity=0.156  Sum_probs=62.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh-cCCccEEE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGGADYSF  268 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~dvv~  268 (353)
                      ++++++||-+|+|. |..+..+++..|. .++++++.++ ..+.    .-..++..+..+....+.+.... ++.||+|+
T Consensus        20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~   93 (180)
T 1ej0_A           20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERVGDSKVQVVM   93 (180)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence            67899999999875 7777788887532 3999999887 3322    11122222211222222333323 34899999


Q ss_pred             ec-----cCC------------hHHHHHHHHHhccCCceEEEEcCCC
Q 018627          269 EC-----IGD------------TGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       269 d~-----~g~------------~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ..     .+.            ...+..+.+.++++ |+++......
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~~  139 (180)
T 1ej0_A           94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVFQG  139 (180)
T ss_dssp             ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEESS
T ss_pred             ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEecC
Confidence            73     222            25677788899997 9998865543

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=95.71  E-value=0.022  Score=51.03  Aligned_cols=95  Identities=18%  Similarity=0.168  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CC---------ceEeCCCCCCccHHHHHH
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GV---------TEFLNPNDNNEPVQQVIK  257 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~---------~~~~~~~~~~~~~~~~~~  257 (353)
                      ..+++||++|+| .|..+..+++. +..+|++++.+++-.+.+++ +    +.         ..+-..   ..+..+.+.
T Consensus        74 ~~~~~VLdiG~G-~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~---~~D~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGG-DGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT---IGDGFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECT-TSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE---ESCHHHHHH
T ss_pred             CCCCeEEEEcCC-cCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEE---ECchHHHhc
Confidence            467899999875 35566667776 66699999999999888876 3    21         111111   123333343


Q ss_pred             HHhcCCccEEEeccC----------ChHHHHHHHHHhccCCceEEEE
Q 018627          258 RITDGGADYSFECIG----------DTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g----------~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .  .+.||+|+-...          ....+..+.+.|+++ |.++..
T Consensus       149 ~--~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~  192 (281)
T 1mjf_A          149 N--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ  192 (281)
T ss_dssp             H--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             c--cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence            3  458998886443          135678888999997 998875

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.69  E-value=0.044  Score=49.44  Aligned_cols=73  Identities=22%  Similarity=0.302  Sum_probs=46.7

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhc-CCccEE
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITD-GGADYS  267 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~-~~~dvv  267 (353)
                      .++-.+|||+|+ |.+|..+++.+...|. +|++++++.++ +.   +++..+ .|..  +.   +.+.+... +++|+|
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~~~~~Dl~--d~---~~~~~~~~~~~~d~v   78 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVEMISLDIM--DS---QRVKKVISDIKPDYI   78 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEEEEECCTT--CH---HHHHHHHHHHCCSEE
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceeeEEECCCC--CH---HHHHHHHHhcCCCEE
Confidence            345688999998 9999999999998998 99999887665 21   232222 1222  21   22333222 269999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      |.+++.
T Consensus        79 ih~A~~   84 (321)
T 2pk3_A           79 FHLAAK   84 (321)
T ss_dssp             EECCSC
T ss_pred             EEcCcc
Confidence            999874

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.68  E-value=0.02  Score=50.22  Aligned_cols=79  Identities=19%  Similarity=0.287  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHH-HHH----hCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAK----AFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~-~~~----~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++++++.++.+ .++    +.+... .+  |..+ ..++.+.+....  -
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~   90 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL   90 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC-HHHHHHHHHHHHHhc
Confidence            4678999998 8999999999999999 8999988654432 222    223322 22  3321 223333333322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|++++++|.
T Consensus        91 ~~id~li~~Ag~  102 (265)
T 1h5q_A           91 GPISGLIANAGV  102 (265)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.68  E-value=0.014  Score=50.96  Aligned_cols=73  Identities=16%  Similarity=0.242  Sum_probs=46.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH-CCCCeEEEEcCChh-hHHHHHhCCCceEe--CCCCCCccHHHHHHHHhcCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPE-KCEKAKAFGVTEFL--NPNDNNEPVQQVIKRITDGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~-~g~~~vi~~~~~~~-~~~~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~dvv  267 (353)
                      .++++||+|+ +++|.++++.+.. .|+ +|+.++++++ ..+.      ...+  |..+ ..++.+.+.....+++|++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~~------~~~~~~Dv~~-~~~v~~~~~~~~~~~id~l   74 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAEN------LKFIKADLTK-QQDITNVLDIIKNVSFDGI   74 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCTT------EEEEECCTTC-HHHHHHHHHHTTTCCEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEecccccccccc------ceEEecCcCC-HHHHHHHHHHHHhCCCCEE
Confidence            5678999998 8999999887766 677 8888877765 2111      1222  2221 2333333433333389999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      ++++|.
T Consensus        75 v~nAg~   80 (244)
T 4e4y_A           75 FLNAGI   80 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999985

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.67  E-value=0.048  Score=47.96  Aligned_cols=79  Identities=22%  Similarity=0.390  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChh---hHHHHH-hCCCceEe--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKAK-AFGVTEFL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~---~~~~~~-~~G~~~~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+   |++|.++++.+...|+ +|++++++++   ..+.+. +.+....+  |..+ ..++.+.+.+..  -
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQ-DEELDALFAGVKEAF   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCC-HHHHHHHHHHHHHHc
Confidence            4789999986   5899999999888899 8999988875   333332 24432332  3321 222333333221  1


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++|+++|.
T Consensus        85 g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 GGLDYLVHAIAF   96 (261)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999874

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.64  E-value=0.023  Score=51.77  Aligned_cols=76  Identities=16%  Similarity=0.191  Sum_probs=50.7

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CC--CceE--eCCCCCCccHHHHHHHHh
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FG--VTEF--LNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G--~~~~--~~~~~~~~~~~~~~~~~~  260 (353)
                      ...+++|||+|+ |.+|..++..+...|. +|++++++.++.+.+.+     .+  +..+  .|..+ ...+    .+..
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~----~~~~   81 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK-QGAY----DEVI   81 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS-TTTT----TTTT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC-hHHH----HHHH
Confidence            346789999998 9999999999988998 99999998877654432     12  2212  12221 1111    1211


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                       .++|+||++++.
T Consensus        82 -~~~d~vih~A~~   93 (342)
T 1y1p_A           82 -KGAAGVAHIASV   93 (342)
T ss_dssp             -TTCSEEEECCCC
T ss_pred             -cCCCEEEEeCCC
Confidence             269999999874

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.63  E-value=0.036  Score=54.16  Aligned_cols=79  Identities=19%  Similarity=0.298  Sum_probs=52.7

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-------HHHHHhCCCceEe---CCCCCCccHHHHHHHH
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------CEKAKAFGVTEFL---NPNDNNEPVQQVIKRI  259 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-------~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~  259 (353)
                      +++++++||+|+ |++|..++..+...|+++|+.++++...       .+.+++.|..-.+   |..+ ...+.+.+.. 
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~-  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE-RDALAALVTA-  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC-HHHHHHHHHH-
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHhc-
Confidence            567899999987 9999999999988899678888887632       2334555654322   2221 1222222222 


Q ss_pred             hcCCccEEEeccCC
Q 018627          260 TDGGADYSFECIGD  273 (353)
Q Consensus       260 ~~~~~dvv~d~~g~  273 (353)
                        +.+|+||++.|.
T Consensus       334 --~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 --YPPNAVFHTAGI  345 (511)
T ss_dssp             --SCCSEEEECCCC
T ss_pred             --CCCcEEEECCcc
Confidence              579999999884

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.61  E-value=0.041  Score=50.69  Aligned_cols=78  Identities=17%  Similarity=0.205  Sum_probs=52.2

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHh-CCC--ceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA-FGV--TEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~-~G~--~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      -.+++|||+|+ |.+|..+++.+... |..+|+++++++.+.+.+++ +..  ...+..+  -.+ .+.+.+... ++|+
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~D--l~d-~~~l~~~~~-~~D~   94 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGD--VRD-LERLNYALE-GVDI   94 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECC--TTC-HHHHHHHTT-TCSE
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECC--CCC-HHHHHHHHh-cCCE
Confidence            35789999998 99999999988888 86689999999887665533 221  1122121  111 223333332 6999


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      ||.+++.
T Consensus        95 Vih~Aa~  101 (344)
T 2gn4_A           95 CIHAAAL  101 (344)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.61  E-value=0.036  Score=53.78  Aligned_cols=82  Identities=22%  Similarity=0.287  Sum_probs=54.0

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-------HHHHHhCCCceE-e--CCCCCCccHHHHHHHH
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------CEKAKAFGVTEF-L--NPNDNNEPVQQVIKRI  259 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-------~~~~~~~G~~~~-~--~~~~~~~~~~~~~~~~  259 (353)
                      ++++.++||+|+ |++|..+++.+...|+++|+.++++...       .+.+++.|..-. +  |.. +...+.+.+...
T Consensus       223 ~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~-d~~~v~~~~~~i  301 (486)
T 2fr1_A          223 WKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVT-DRESVRELLGGI  301 (486)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-CHHHHHHHHHTS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCC-CHHHHHHHHHHH
Confidence            567899999987 9999999998888899668888887641       233455665432 2  222 122333333333


Q ss_pred             h-cCCccEEEeccCC
Q 018627          260 T-DGGADYSFECIGD  273 (353)
Q Consensus       260 ~-~~~~dvv~d~~g~  273 (353)
                      . .+.+|+||++.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence            1 1378999999884

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.58  E-value=0.015  Score=51.02  Aligned_cols=81  Identities=22%  Similarity=0.284  Sum_probs=49.2

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc-CChhhH----HHHHhCCCce-Ee--CCCCCCccHHHHHHHHh-
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKC----EKAKAFGVTE-FL--NPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~-~~~~~~----~~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~-  260 (353)
                      ..++++|||+|+ +++|.+++..+...|+ +|++++ ++.++.    +.+++.+... .+  |..+ ..++.+.+.+.. 
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   87 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD-WDSTKQAFDKVKA   87 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCC-HHHHHHHHHHHHH
Confidence            457889999987 8999999999999999 777765 444433    2334445332 22  2221 223333333321 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++++++|.
T Consensus        88 ~~g~id~lv~~Ag~  101 (256)
T 3ezl_A           88 EVGEIDVLVNNAGI  101 (256)
T ss_dssp             HTCCEEEEEECCCC
T ss_pred             hcCCCCEEEECCCC
Confidence             2379999999884

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=95.57  E-value=0.16  Score=40.67  Aligned_cols=95  Identities=6%  Similarity=0.081  Sum_probs=58.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC-hhhHHHHH---hCCCceEeCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN-PEKCEKAK---AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~-~~~~~~~~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .++|+|.|+|.+|..+++.+...|. .|++++++ +++.+.++   ..|...+. -+  ..+ .+.+.+..-.++|.|+-
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~i~-gd--~~~-~~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GD--SND-SSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SC--TTS-HHHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeEEE-cC--CCC-HHHHHHcChhhCCEEEE
Confidence            4679999999999999999999998 89999887 46555443   23443332 21  111 23344332237999999


Q ss_pred             ccCChHH---HHHHHHHhccCCceEEEE
Q 018627          270 CIGDTGM---ITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       270 ~~g~~~~---~~~~~~~l~~~~G~~v~~  294 (353)
                      +++....   .....+.+.+. .+++..
T Consensus        78 ~~~~d~~n~~~~~~a~~~~~~-~~ii~~  104 (153)
T 1id1_A           78 LSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             ecCChHHHHHHHHHHHHHCCC-CEEEEE
Confidence            9887432   22223344343 566554

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.57  E-value=0.062  Score=49.03  Aligned_cols=132  Identities=12%  Similarity=0.097  Sum_probs=77.0

Q ss_pred             EEEEEcCChHHHHH-HHHHHHCCCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          196 TVVIFGLGTVGLSV-AQGAKARGASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       196 ~vLV~Gag~vG~~a-~~la~~~g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +|.|+|+|.+|... +..++..+. .++ +.++++++.+.+ +++|.....      .++.+.+.   ...+|+|+.++.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~-~~vav~d~~~~~~~~~~~~~g~~~~~------~~~~~~l~---~~~~D~V~i~tp   71 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGG-EVVSMMSTSAERGAAYATENGIGKSV------TSVEELVG---DPDVDAVYVSTT   71 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTC-EEEEEECSCHHHHHHHHHHTTCSCCB------SCHHHHHT---CTTCCEEEECSC
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCC-eEEEEECCCHHHHHHHHHHcCCCccc------CCHHHHhc---CCCCCEEEEeCC
Confidence            58899999999876 544434777 554 668888777654 557754221      22333332   136999999998


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCcee--cchhhhhc--CcEEEeeecCCCCCCCcHHHHHHHHHcCCC
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVA--AHYGLFLS--GRTLKGSLFGGWKPKTDLPSLVNRYLKKVR  342 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~--~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i  342 (353)
                      .....+.+..+++.  |+-|++..+.. .+..  .....+.+  ++.+.-.....  ....+..+.+++++|+|
T Consensus        72 ~~~h~~~~~~al~~--Gk~v~~ekP~~-~~~~~~~~l~~~a~~~g~~~~~~~~~r--~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           72 NELHREQTLAAIRA--GKHVLCEKPLA-MTLEDAREMVVAAREAGVVLGTNHHLR--NAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECSSSC-SSHHHHHHHHHHHHHHTCCEEECCCGG--GSHHHHHHHHHHHTTTT
T ss_pred             hhHhHHHHHHHHHC--CCeEEEeCCCc-CCHHHHHHHHHHHHHcCCEEEEeehhh--cCHHHHHHHHHHHcCCC
Confidence            87777777788876  55555543211 1111  01111222  44442221111  12457888899999876

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=95.56  E-value=0.029  Score=52.76  Aligned_cols=83  Identities=22%  Similarity=0.201  Sum_probs=52.3

Q ss_pred             ccC-CCCCEEEEEcC-ChHHHHHHHHHHH-CCCCeEEEEcCChhh----------------HHHHHhCCCceE-e--CCC
Q 018627          189 ADI-SKGSTVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPEK----------------CEKAKAFGVTEF-L--NPN  246 (353)
Q Consensus       189 ~~~-~~g~~vLV~Ga-g~vG~~a~~la~~-~g~~~vi~~~~~~~~----------------~~~~~~~G~~~~-~--~~~  246 (353)
                      ..+ ..++++||+|+ +++|++.++.+.. .|+ +|++++++.+.                .+.+++.|.... +  |..
T Consensus        41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvt  119 (405)
T 3zu3_A           41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAF  119 (405)
T ss_dssp             CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCC
Confidence            344 55788899987 8999999888888 899 88888665432                224455665432 2  222


Q ss_pred             CCCccHHHHHHHHh--cCCccEEEeccCC
Q 018627          247 DNNEPVQQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       247 ~~~~~~~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                       +.....+.+....  -+++|++++++|.
T Consensus       120 -d~~~v~~~v~~i~~~~G~IDiLVNNAG~  147 (405)
T 3zu3_A          120 -SDEIKQLTIDAIKQDLGQVDQVIYSLAS  147 (405)
T ss_dssp             -SHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred             -CHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence             1223333333221  2589999999875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.56  E-value=0.014  Score=53.15  Aligned_cols=79  Identities=13%  Similarity=0.180  Sum_probs=47.4

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh--HHHHHhCC--C-ceEeCCCCCCccHHHHHHHHhcC-C
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFG--V-TEFLNPNDNNEPVQQVIKRITDG-G  263 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~G--~-~~~~~~~~~~~~~~~~~~~~~~~-~  263 (353)
                      -+++.+|||+|+ |.+|..+++.+...|. +|++++++.++  .+.++.+.  . ..++..+-.+.   +.+.+...+ .
T Consensus        11 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~~~   86 (335)
T 1rpn_A           11 GSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA---CSVQRAVIKAQ   86 (335)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCH---HHHHHHHHHHC
T ss_pred             cccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCCH---HHHHHHHHHcC
Confidence            467899999998 9999999999988998 89999887654  12233321  1 11221111121   223333333 6


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|+||.+++.
T Consensus        87 ~d~Vih~A~~   96 (335)
T 1rpn_A           87 PQEVYNLAAQ   96 (335)
T ss_dssp             CSEEEECCSC
T ss_pred             CCEEEECccc
Confidence            8999999874

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.55  E-value=0.067  Score=49.37  Aligned_cols=92  Identities=15%  Similarity=0.175  Sum_probs=64.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      .+|.|+|.|.+|.+++..++..|. +|++.++++++.+.++++|+...       .+..+.+... ....|+||-|+.. 
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~-------~~~~e~~~~a-~~~aDlVilavP~-   78 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS-------ADLEATLQRA-AAEDALIVLAVPM-   78 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE-------SCHHHHHHHH-HHTTCEEEECSCH-
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee-------CCHHHHHHhc-ccCCCEEEEeCCH-
Confidence            579999999999999999999998 89999999999999999997432       1233333321 1147999999885 


Q ss_pred             HHHHHHHH---HhccCCceEEEEcCC
Q 018627          275 GMITTALQ---SCCDGWGLAVTLGVP  297 (353)
Q Consensus       275 ~~~~~~~~---~l~~~~G~~v~~g~~  297 (353)
                      ..+...++   .++++ ..++.+++.
T Consensus        79 ~~~~~vl~~l~~~~~~-~iv~Dv~Sv  103 (341)
T 3ktd_A           79 TAIDSLLDAVHTHAPN-NGFTDVVSV  103 (341)
T ss_dssp             HHHHHHHHHHHHHCTT-CCEEECCSC
T ss_pred             HHHHHHHHHHHccCCC-CEEEEcCCC
Confidence            33333332   23554 566667654

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.54  E-value=0.04  Score=49.68  Aligned_cols=36  Identities=25%  Similarity=0.363  Sum_probs=32.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .+.+|||+|+|++|..++..+.+.|..++..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            457999999999999999999999999999998765

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.53  E-value=0.077  Score=50.91  Aligned_cols=95  Identities=15%  Similarity=0.056  Sum_probs=58.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +++|+|+|+|.+|.++++.+...|. +|++++++.++.+.+.+ ++....+..+  ..+. +.+.+... ++|+|++|++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~D--v~d~-~~l~~~l~-~~DvVIn~a~   77 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLD--VNDD-AALDAEVA-KHDLVISLIP   77 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECC--TTCH-HHHHHHHT-TSSEEEECCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEee--cCCH-HHHHHHHc-CCcEEEECCc
Confidence            5789999999999999998888898 89999999887765533 3322222111  1112 12222222 6999999998


Q ss_pred             ChHHHHHHHHHhccCCceEEEE
Q 018627          273 DTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ..........++..+ .+++..
T Consensus        78 ~~~~~~i~~a~l~~g-~~vvd~   98 (450)
T 1ff9_A           78 YTFHATVIKSAIRQK-KHVVTT   98 (450)
T ss_dssp             --CHHHHHHHHHHHT-CEEEES
T ss_pred             cccchHHHHHHHhCC-CeEEEe
Confidence            633333344556664 555554

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=95.52  E-value=0.053  Score=48.83  Aligned_cols=69  Identities=12%  Similarity=0.053  Sum_probs=47.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      ++|||+|+ |.+|..+++.+...|. +|+++++++.+.+ ++  ++.. +..   +-. .+.+.+... ++|+||.+++.
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~~~-~~~---Dl~-~~~~~~~~~-~~d~Vih~a~~   72 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DYEY-RVS---DYT-LEDLINQLN-DVDAVVHLAAT   72 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CCEE-EEC---CCC-HHHHHHHTT-TCSEEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ceEE-EEc---ccc-HHHHHHhhc-CCCEEEEcccc
Confidence            68999998 9999999999999998 9999988855544 43  3332 222   223 455555443 79999999874

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.52  E-value=0.057  Score=45.61  Aligned_cols=47  Identities=13%  Similarity=0.206  Sum_probs=37.3

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      ....+.++.+||..|+| .|..+..+++. |+ +|+++|.+++-++.+++
T Consensus        16 ~~l~~~~~~~vLD~GCG-~G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~   62 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCG-KSQDMSWLSGQ-GY-HVVGAELSEAAVERYFT   62 (203)
T ss_dssp             HHHCCCTTCEEEETTTC-CSHHHHHHHHH-CC-EEEEEEECHHHHHHHHH
T ss_pred             HhcccCCCCEEEEeCCC-CcHhHHHHHHC-CC-eEEEEeCCHHHHHHHHH
Confidence            34456789999999885 46666677775 88 99999999998888865

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.52  E-value=0.027  Score=49.60  Aligned_cols=78  Identities=15%  Similarity=0.176  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-ChhhHHHHHh----CCCce-E--eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKAKA----FGVTE-F--LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-~~~~~~~~~~----~G~~~-~--~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|+++++ +++..+.+++    .+... +  .|..+ ..++.+.+.+..  .
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~   83 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK-KEDLHKIVEEAMSHF   83 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHh
Confidence            4688999998 8999999999999999 7877744 4444444433    22221 2  23321 223333333322  1


Q ss_pred             CCccEEEeccC
Q 018627          262 GGADYSFECIG  272 (353)
Q Consensus       262 ~~~dvv~d~~g  272 (353)
                      +++|++|+++|
T Consensus        84 g~id~lv~~Ag   94 (264)
T 3i4f_A           84 GKIDFLINNAG   94 (264)
T ss_dssp             SCCCEEECCCC
T ss_pred             CCCCEEEECCc
Confidence            37999999998

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.50  E-value=0.13  Score=47.82  Aligned_cols=91  Identities=12%  Similarity=0.253  Sum_probs=63.4

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      ..+|.|+|.|.+|..+++.+...|. .|++.++++++.+.+.+.|+..       ..++.+.+...  ..+|+||-++..
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~-------~~s~~e~~~~a--~~~DvVi~~vp~   91 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG-------ARSIEEFCAKL--VKPRVVWLMVPA   91 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC-------CSSHHHHHHHS--CSSCEEEECSCG
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE-------eCCHHHHHhcC--CCCCEEEEeCCH
Confidence            4689999999999999999999998 9999999999999888877532       12344444331  245888888876


Q ss_pred             hHHHHHHHHH----hccCCceEEEEcC
Q 018627          274 TGMITTALQS----CCDGWGLAVTLGV  296 (353)
Q Consensus       274 ~~~~~~~~~~----l~~~~G~~v~~g~  296 (353)
                      . .....+..    ++++ ..++..+.
T Consensus        92 ~-~v~~vl~~l~~~l~~g-~iiId~st  116 (358)
T 4e21_A           92 A-VVDSMLQRMTPLLAAN-DIVIDGGN  116 (358)
T ss_dssp             G-GHHHHHHHHGGGCCTT-CEEEECSS
T ss_pred             H-HHHHHHHHHHhhCCCC-CEEEeCCC
Confidence            5 44444433    4443 45555544

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.50  E-value=0.045  Score=50.36  Aligned_cols=132  Identities=12%  Similarity=0.102  Sum_probs=80.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHC-CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          195 STVVIFGLGTVGLSVAQGAKAR-GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~-g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|+. ..      .++.+.+.   ...+|+|+.|+
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~~-~~------~~~~~~l~---~~~~D~V~i~t   73 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANGAE-AV------ASPDEVFA---RDDIDGIVIGS   73 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTTCE-EE------SSHHHHTT---CSCCCEEEECS
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCCc-ee------CCHHHHhc---CCCCCEEEEeC
Confidence            4689999999999888877766 66 555 568888876654 557732 22      12332222   23799999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCcee--cchhhhhc--CcEE-EeeecCCCCCCCcHHHHHHHHHcCCCC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA--AHYGLFLS--GRTL-KGSLFGGWKPKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~--~~~~~~~~--~~~i-~g~~~~~~~~~~~~~~~~~~l~~g~i~  343 (353)
                      ......+.+..++..  |+-|++..+-. .+..  .......+  ++.+ .++...   ....+..+.+++++|+|-
T Consensus        74 p~~~h~~~~~~al~~--gk~v~~EKP~~-~~~~~~~~l~~~a~~~g~~~~v~~~~r---~~p~~~~~k~~i~~g~iG  144 (344)
T 3euw_A           74 PTSTHVDLITRAVER--GIPALCEKPID-LDIEMVRACKEKIGDGASKVMLGFNRR---FDPSFAAINARVANQEIG  144 (344)
T ss_dssp             CGGGHHHHHHHHHHT--TCCEEECSCSC-SCHHHHHHHHHHHGGGGGGEEECCGGG---GCHHHHHHHHHHHTTTTS
T ss_pred             CchhhHHHHHHHHHc--CCcEEEECCCC-CCHHHHHHHHHHHHhcCCeEEecchhh---cCHHHHHHHHHHhcCCCC
Confidence            987777888888876  45455643322 1111  11111222  4433 222211   135688889999998773

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.50  E-value=0.027  Score=55.21  Aligned_cols=82  Identities=11%  Similarity=0.139  Sum_probs=53.2

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCCh-------------h----hHHHHHhCCCceEe---CCCCC
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNP-------------E----KCEKAKAFGVTEFL---NPNDN  248 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~-------------~----~~~~~~~~G~~~~~---~~~~~  248 (353)
                      +++++++||+|+ |++|..+++.+...|+++++.+ +++.             +    ..+.+++.|..-.+   |.. +
T Consensus       248 ~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvt-d  326 (525)
T 3qp9_A          248 WQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLT-D  326 (525)
T ss_dssp             SCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTT-S
T ss_pred             ecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCC-C
Confidence            567899999987 9999999998888899668887 7772             2    23334555654322   222 1


Q ss_pred             CccHHHHHHHHh-cCCccEEEeccCC
Q 018627          249 NEPVQQVIKRIT-DGGADYSFECIGD  273 (353)
Q Consensus       249 ~~~~~~~~~~~~-~~~~dvv~d~~g~  273 (353)
                      ..++.+.+.... .+++|+||++.|.
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence            223333333332 2379999999984

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.46  E-value=0.12  Score=46.19  Aligned_cols=74  Identities=22%  Similarity=0.270  Sum_probs=54.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG  275 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~  275 (353)
                      +|.|+|+|.+|...+..+...|. +|++.++++++.+.+++.|+..   .    .+..+.+.     ..|+||-|+..+.
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~Dvvi~~vp~~~   68 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQV---V----SSPADVAE-----KADRIITMLPTSI   68 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEE---C----SSHHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee---c----CCHHHHHh-----cCCEEEEeCCCHH
Confidence            58899999999999998888898 8999999999988888776431   1    12333333     2788998886655


Q ss_pred             HHHHHHH
Q 018627          276 MITTALQ  282 (353)
Q Consensus       276 ~~~~~~~  282 (353)
                      .....+.
T Consensus        69 ~~~~v~~   75 (296)
T 2gf2_A           69 NAIEAYS   75 (296)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            5555554

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.42  E-value=0.053  Score=50.17  Aligned_cols=89  Identities=26%  Similarity=0.341  Sum_probs=56.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++.++. ..+++|+..+       .++.+.+.+     .|+|+-++.
T Consensus       167 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~~-------~~l~ell~~-----aDvV~l~~P  232 (347)
T 1mx3_A          167 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV-------STLQDLLFH-----SDCVTLHCG  232 (347)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC-------SSHHHHHHH-----CSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcchh-hHhhcCCeec-------CCHHHHHhc-----CCEEEEcCC
Confidence            57899999999999999999999999 899998765542 2344554321       122333322     566666654


Q ss_pred             ChH----HH-HHHHHHhccCCceEEEEcC
Q 018627          273 DTG----MI-TTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~~----~~-~~~~~~l~~~~G~~v~~g~  296 (353)
                      ...    .+ ...+..|+++ ..+|.++.
T Consensus       233 ~t~~t~~li~~~~l~~mk~g-ailIN~ar  260 (347)
T 1mx3_A          233 LNEHNHHLINDFTVKQMRQG-AFLVNTAR  260 (347)
T ss_dssp             CCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCHHHHHHhHHHHHhcCCCC-CEEEECCC
Confidence            321    11 3444556664 66666654

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.41  E-value=0.04  Score=56.79  Aligned_cols=82  Identities=22%  Similarity=0.310  Sum_probs=55.2

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHH-HCCCCeEEEEcCCh---h----hHHHHHhCCCceEe---CCCCCCccHHHHHHH
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAK-ARGASRIIGVDTNP---E----KCEKAKAFGVTEFL---NPNDNNEPVQQVIKR  258 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~-~~g~~~vi~~~~~~---~----~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~  258 (353)
                      +.+++++||+|+ |++|.++++.+. ..|+++|+.++++.   +    ..+.+++.|....+   |.. +..++.+.+.+
T Consensus       527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvs-d~~~v~~~~~~  605 (795)
T 3slk_A          527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVA-DRETLAKVLAS  605 (795)
T ss_dssp             CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-CHHHHHHHHHT
T ss_pred             cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecC-CHHHHHHHHHH
Confidence            467899999987 999999998886 78997788888873   2    23344556765432   222 12334444444


Q ss_pred             HhcC-CccEEEeccCC
Q 018627          259 ITDG-GADYSFECIGD  273 (353)
Q Consensus       259 ~~~~-~~dvv~d~~g~  273 (353)
                      .... ++|++|+++|.
T Consensus       606 ~~~~~~id~lVnnAGv  621 (795)
T 3slk_A          606 IPDEHPLTAVVHAAGV  621 (795)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             HHHhCCCEEEEECCCc
Confidence            3333 79999999885

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.41  E-value=0.083  Score=48.76  Aligned_cols=131  Identities=14%  Similarity=0.077  Sum_probs=81.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHC--CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          195 STVVIFGLGTVGLSVAQGAKAR--GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~--g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -+|.|+|+|.+|...+..++..  ++ +++ +.++++++.+.+ +++|+ ...      .++.+.+..   ..+|+|+.|
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~-~lvav~d~~~~~~~~~~~~~~~-~~~------~~~~~ll~~---~~~D~V~i~   82 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRA-ELIDVCDIDPAALKAAVERTGA-RGH------ASLTDMLAQ---TDADIVILT   82 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHHCC-EEE------SCHHHHHHH---CCCSEEEEC
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCe-EEEEEEcCCHHHHHHHHHHcCC-cee------CCHHHHhcC---CCCCEEEEC
Confidence            4789999999998887777766  67 554 668888886654 55776 332      234444432   369999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCCCCCcee--cchhhhhc--CcEE-EeeecCCCCCCCcHHHHHHHHHcCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA--AHYGLFLS--GRTL-KGSLFGGWKPKTDLPSLVNRYLKKVR  342 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~--~~~~~~~~--~~~i-~g~~~~~~~~~~~~~~~~~~l~~g~i  342 (353)
                      +......+.+..++..  |+-|++.-+-. .+..  .......+  ++.+ .++....   ...+.++.+++++|+|
T Consensus        83 tp~~~h~~~~~~al~~--gk~v~~EKP~a-~~~~~~~~l~~~a~~~g~~~~v~~~~r~---~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           83 TPSGLHPTQSIECSEA--GFHVMTEKPMA-TRWEDGLEMVKAADKAKKHLFVVKQNRR---NATLQLLKRAMQEKRF  153 (354)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSSSC-SSHHHHHHHHHHHHHHTCCEEECCGGGG---SHHHHHHHHHHHTTTT
T ss_pred             CCcHHHHHHHHHHHHC--CCCEEEeCCCc-CCHHHHHHHHHHHHHhCCeEEEEEcccC---CHHHHHHHHHHhcCCC
Confidence            9887777777788876  55566643322 1111  01111222  4444 3332221   3568888999999886

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=95.41  E-value=0.11  Score=47.92  Aligned_cols=98  Identities=19%  Similarity=0.203  Sum_probs=59.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhH--HHHHhC-CCceE-eC-CCCCCccHHHHHHHHhcCCccEE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC--EKAKAF-GVTEF-LN-PNDNNEPVQQVIKRITDGGADYS  267 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~--~~~~~~-G~~~~-~~-~~~~~~~~~~~~~~~~~~~~dvv  267 (353)
                      +++|||+|+ |.+|..+++.+...|. +|++++++.++.  +.+.+. ++..+ .| ..  +.   +.+.+.. .++|+|
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~--d~---~~l~~~~-~~~d~V   77 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNVTLFQGPLLN--NV---PLMDTLF-EGAHLA   77 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTEEEEESCCTT--CH---HHHHHHH-TTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhcCCcEEEECCccC--CH---HHHHHHH-hcCCEE
Confidence            567999998 9999999998888898 888888887664  334433 32222 12 22  21   2233322 258999


Q ss_pred             EeccCCh-----HHHHHHHHHhccC--CceEEEEcCCC
Q 018627          268 FECIGDT-----GMITTALQSCCDG--WGLAVTLGVPK  298 (353)
Q Consensus       268 ~d~~g~~-----~~~~~~~~~l~~~--~G~~v~~g~~~  298 (353)
                      |.+.+..     ......++.++..  -+++|.+++..
T Consensus        78 i~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~  115 (352)
T 1xgk_A           78 FINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD  115 (352)
T ss_dssp             EECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred             EEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence            9877542     1123344444442  15899887653

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=95.40  E-value=0.022  Score=52.50  Aligned_cols=99  Identities=16%  Similarity=0.173  Sum_probs=65.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC------CC--ceEeCCCCCCccHHHHHHHHhcC
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF------GV--TEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~------G~--~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ...+++||.+|+| .|..+..+++..+..+|++++.+++-++.+++.      |.  ..+-..   ..+..+.+.....+
T Consensus       118 ~~~~~~VLdIG~G-~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~---~~D~~~~l~~~~~~  193 (334)
T 1xj5_A          118 IPNPKKVLVIGGG-DGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV---IGDGVAFLKNAAEG  193 (334)
T ss_dssp             SSCCCEEEEETCS-SSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE---ESCHHHHHHTSCTT
T ss_pred             CCCCCEEEEECCC-ccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE---ECCHHHHHHhccCC
Confidence            4567899999875 355666777765545999999999988888652      11  111111   23344444433234


Q ss_pred             CccEEEeccC----------ChHHHHHHHHHhccCCceEEEE
Q 018627          263 GADYSFECIG----------DTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       263 ~~dvv~d~~g----------~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .||+|+-...          ....+..+.+.|+++ |.++.-
T Consensus       194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            8999886432          235678888999997 999885

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.39  E-value=0.13  Score=45.60  Aligned_cols=86  Identities=23%  Similarity=0.374  Sum_probs=59.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce-EeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +|.|+|+|.+|.+.+..+...|. +|+++++++++.+.+++.|... ...      +..    +.  ...|+||-|+.. 
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~------~~~----~~--~~~D~vi~av~~-   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ------DLS----LL--QTAKIIFLCTPI-   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES------CGG----GG--TTCSEEEECSCH-
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC------CHH----Hh--CCCCEEEEECCH-
Confidence            68899999999999999988898 8999999999998888887642 111      111    11  358999999875 


Q ss_pred             HHHHHHHHH----hccCCceEEEEcC
Q 018627          275 GMITTALQS----CCDGWGLAVTLGV  296 (353)
Q Consensus       275 ~~~~~~~~~----l~~~~G~~v~~g~  296 (353)
                      ......++.    ++++ ..++.++.
T Consensus        68 ~~~~~~~~~l~~~~~~~-~~vv~~~~   92 (279)
T 2f1k_A           68 QLILPTLEKLIPHLSPT-AIVTDVAS   92 (279)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEECCS
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEECCC
Confidence            334444433    3443 45555533

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.39  E-value=0.074  Score=48.89  Aligned_cols=87  Identities=17%  Similarity=0.148  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|+ +|++.+++.++.  +++. +.    +   ..++.+.+.     ..|+|+.++.
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~--~~~~-~~----~---~~~l~ell~-----~aDvV~l~~p  208 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPE--LEKK-GY----Y---VDSLDDLYK-----QADVISLHVP  208 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHH--HHHT-TC----B---CSCHHHHHH-----HCSEEEECSC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcchh--HHhh-Ce----e---cCCHHHHHh-----hCCEEEEcCC
Confidence            47899999999999999999999999 999998887664  2332 21    1   113333333     2788888876


Q ss_pred             ChHH----H-HHHHHHhccCCceEEEEcC
Q 018627          273 DTGM----I-TTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~~~----~-~~~~~~l~~~~G~~v~~g~  296 (353)
                      ....    + ...+..++++ +.++.++.
T Consensus       209 ~~~~t~~li~~~~l~~mk~g-a~lIn~ar  236 (333)
T 1j4a_A          209 DVPANVHMINDESIAKMKQD-VVIVNVSR  236 (333)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             CcHHHHHHHhHHHHhhCCCC-cEEEECCC
Confidence            4221    1 3456778886 77887764

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.39  E-value=0.042  Score=50.54  Aligned_cols=44  Identities=20%  Similarity=0.336  Sum_probs=37.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG  238 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G  238 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++.++ +.++++|
T Consensus       145 ~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g  188 (333)
T 2d0i_A          145 YGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELK  188 (333)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHT
T ss_pred             CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcC
Confidence            57899999999999999999999999 99999988776 4444444

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=95.37  E-value=0.041  Score=48.57  Aligned_cols=79  Identities=18%  Similarity=0.201  Sum_probs=49.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEE-EcCChhhHHHH----HhCCCce-Ee--CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~-~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~~~~~~~~~--~  261 (353)
                      .++++||+|+ |++|.++++.+...|+ +|++ ..++.++.+..    ++.+... ++  |..+ ..++.+.+.+..  .
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~  102 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVAN-REQCREVLEHEIAQH  102 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHh
Confidence            4688999998 8999999999999999 6644 55666554432    3334322 22  3221 223333333221  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|++|+++|.
T Consensus       103 g~id~li~nAg~  114 (267)
T 4iiu_A          103 GAWYGVVSNAGI  114 (267)
T ss_dssp             CCCSEEEECCCC
T ss_pred             CCccEEEECCCC
Confidence            479999999874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.37  E-value=0.13  Score=45.24  Aligned_cols=35  Identities=29%  Similarity=0.426  Sum_probs=31.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      .+.+|+|+|+|++|..++..+...|.+++..+|.+
T Consensus        27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35799999999999999999999999899998665

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=95.35  E-value=0.032  Score=49.71  Aligned_cols=77  Identities=23%  Similarity=0.377  Sum_probs=57.0

Q ss_pred             CCCCEEEEEcCC-hHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          192 SKGSTVVIFGLG-TVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       192 ~~g~~vLV~Gag-~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      -.|++++|+|.| .+|..+++++...  |+ +|+.+.+.                     ..++.+.++     .+|+||
T Consensus       156 l~gk~vvVvG~s~iVG~p~A~lL~~~g~~a-tVtv~h~~---------------------t~~L~~~~~-----~ADIVI  208 (281)
T 2c2x_A          156 IAGAHVVVIGRGVTVGRPLGLLLTRRSENA-TVTLCHTG---------------------TRDLPALTR-----QADIVV  208 (281)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHTSTTTCC-EEEEECTT---------------------CSCHHHHHT-----TCSEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHhcCCCCC-EEEEEECc---------------------hhHHHHHHh-----hCCEEE
Confidence            479999999997 5799999999999  78 88887432                     233444444     499999


Q ss_pred             eccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          269 ECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       269 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .++|.+..+..  +.++++ ..++.+|...
T Consensus       209 ~Avg~p~~I~~--~~vk~G-avVIDVgi~r  235 (281)
T 2c2x_A          209 AAVGVAHLLTA--DMVRPG-AAVIDVGVSR  235 (281)
T ss_dssp             ECSCCTTCBCG--GGSCTT-CEEEECCEEE
T ss_pred             ECCCCCcccCH--HHcCCC-cEEEEccCCC
Confidence            99998765433  347886 8888888653

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.33  E-value=0.047  Score=52.39  Aligned_cols=104  Identities=17%  Similarity=0.224  Sum_probs=70.1

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHC-CC--CeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKAR-GA--SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~-g~--~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      ++....+|||+|+|++|..++.++... +.  ..|+.++.++.+.+..+..|..... ..-+..+..+.+..+..++ |+
T Consensus         9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~-~~Vdadnv~~~l~aLl~~~-Dv   86 (480)
T 2ph5_A            9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKL-QQITPQNYLEVIGSTLEEN-DF   86 (480)
T ss_dssp             CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEE-CCCCTTTHHHHTGGGCCTT-CE
T ss_pred             eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeE-EeccchhHHHHHHHHhcCC-CE
Confidence            345567899999999999999888654 44  3688888777766666666754332 2112445555565555554 99


Q ss_pred             EEeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          267 SFECIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       267 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      |++++-....+...-.++..+ -.++....
T Consensus        87 VIN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           87 LIDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             EEECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             EEECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            999775545555565677775 78888875

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.31  E-value=0.077  Score=48.29  Aligned_cols=102  Identities=16%  Similarity=0.213  Sum_probs=65.9

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHh----CCCce--EeCCCCCCccHHHHHHHH
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~----~G~~~--~~~~~~~~~~~~~~~~~~  259 (353)
                      ...++++|++||-.|+| .|..+.++++.+ +..+|++++.++++++.+++    .|...  ++..+  ...+.    . 
T Consensus       112 ~~l~~~~g~~VLDlg~G-~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D--~~~~~----~-  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAA-PGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSS--SLHIG----E-  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSS-CSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSC--GGGGG----G-
T ss_pred             HHhCCCCCCEEEEeCCC-CCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECC--hhhcc----c-
Confidence            34568899999999874 355556677665 22389999999998887754    46533  22221  11111    1 


Q ss_pred             hcCCccEEEe---ccCC-------------------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627          260 TDGGADYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       260 ~~~~~dvv~d---~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ..+.||+|+-   |+|.                         ...+..+.+.++++ |+++.....
T Consensus       184 ~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~stcs  248 (315)
T 1ixk_A          184 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTCS  248 (315)
T ss_dssp             GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEeCC
Confidence            2347998875   3331                         25567888999997 999876543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=95.30  E-value=0.21  Score=44.51  Aligned_cols=41  Identities=24%  Similarity=0.417  Sum_probs=36.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      ++|.|+|+|.+|...++.+...|. +|++.++++++++.+++
T Consensus         5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence            689999999999999999999999 99999999998776654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=95.29  E-value=0.083  Score=48.03  Aligned_cols=72  Identities=14%  Similarity=0.180  Sum_probs=45.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhC-CCceE-eCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          196 TVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAF-GVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~-G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +|||+|+ |.+|..+++.+... |. +|++++++.++.+.+.+. +...+ .|..+....+.+.+.     ++|+||+++
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A   75 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHY-EVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLV   75 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTC-EEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECB
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCC-EEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEcc
Confidence            6999998 99999999998887 88 899998887765433221 22211 122211112222222     489999987


Q ss_pred             CC
Q 018627          272 GD  273 (353)
Q Consensus       272 g~  273 (353)
                      +.
T Consensus        76 ~~   77 (345)
T 2bll_A           76 AI   77 (345)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=95.29  E-value=0.02  Score=49.24  Aligned_cols=97  Identities=18%  Similarity=0.134  Sum_probs=66.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC-CceEeCCCCCCccHHHHHHHHh-cCCccEEE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-VTEFLNPNDNNEPVQQVIKRIT-DGGADYSF  268 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~-~~~~dvv~  268 (353)
                      +.++.+||-+|+| .|..+..+++. +. +|++++.++..++.+++.. ...++..+. ...+     ... .+.||+|+
T Consensus        46 ~~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~-----~~~~~~~fD~v~  116 (226)
T 3m33_A           46 LTPQTRVLEAGCG-HGPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNG-KGEL-----PAGLGAPFGLIV  116 (226)
T ss_dssp             CCTTCEEEEESCT-TSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCS-CSSC-----CTTCCCCEEEEE
T ss_pred             CCCCCeEEEeCCC-CCHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcch-hhcc-----CCcCCCCEEEEE
Confidence            4688999999885 36666667766 77 9999999999988887642 122222110 0110     012 34899999


Q ss_pred             eccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          269 ECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       269 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ........+....+.|+|+ |+++..+..
T Consensus       117 ~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  144 (226)
T 3m33_A          117 SRRGPTSVILRLPELAAPD-AHFLYVGPR  144 (226)
T ss_dssp             EESCCSGGGGGHHHHEEEE-EEEEEEESS
T ss_pred             eCCCHHHHHHHHHHHcCCC-cEEEEeCCc
Confidence            8766667788899999997 999955543

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.28  E-value=0.077  Score=46.40  Aligned_cols=98  Identities=16%  Similarity=0.202  Sum_probs=65.1

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce--EeCCCCCCccHHHHHHHHh
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~--~~~~~~~~~~~~~~~~~~~  260 (353)
                      +.....++.+||-+|+| .|..+..+++. +. +|++++.+++.++.+++    .|...  ++..+  ..++     ...
T Consensus        31 ~~l~~~~~~~vLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d--~~~l-----~~~  100 (260)
T 1vl5_A           31 QIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGD--AEQM-----PFT  100 (260)
T ss_dssp             HHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC--C-CC-----CSC
T ss_pred             HHhCCCCCCEEEEEeCC-CCHHHHHHHHh-CC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEec--HHhC-----CCC
Confidence            44567789999999986 56666666665 44 99999999988877754    24322  22111  1111     012


Q ss_pred             cCCccEEEeccCC------hHHHHHHHHHhccCCceEEEEc
Q 018627          261 DGGADYSFECIGD------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       261 ~~~~dvv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ++.||+|+....-      ...+....+.|+|+ |+++...
T Consensus       101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~  140 (260)
T 1vl5_A          101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  140 (260)
T ss_dssp             TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            3489999976432      35678888999997 9998864

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.28  E-value=0.031  Score=51.76  Aligned_cols=76  Identities=14%  Similarity=0.256  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCceEeCCCCC-CccHHHHHHHHhcCCccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN-NEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .+++|||+|+ |.+|..+++.+... |. +|++++++.++.+.+.+..-..++..+-. +.+   .+.+... ++|+||.
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~---~~~~~~~-~~d~Vih   97 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITINKE---WVEYHVK-KCDVILP   97 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTTCHH---HHHHHHH-HCSEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCCCHH---HHHHHhc-cCCEEEE
Confidence            3578999998 99999999988887 88 99999998876554433222222222211 111   2222211 5999999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      +++.
T Consensus        98 ~A~~  101 (372)
T 3slg_A           98 LVAI  101 (372)
T ss_dssp             CBCC
T ss_pred             cCcc
Confidence            8874

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.27  E-value=0.098  Score=46.71  Aligned_cols=97  Identities=10%  Similarity=0.084  Sum_probs=65.9

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc---eEeCCCCCCccHHHHHHHHhcC
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~---~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      .+.++.+||-+|+| .|..+..+++..++ +|++++.++..++.+++    .|..   .++..+  ..++     ...++
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~-----~~~~~  149 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS--FLEI-----PCEDN  149 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC--TTSC-----SSCTT
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcC--cccC-----CCCCC
Confidence            77899999999986 57777778887788 99999999988777654    2321   222111  1110     01234


Q ss_pred             CccEEEeccCC------hHHHHHHHHHhccCCceEEEEcC
Q 018627          263 GADYSFECIGD------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       263 ~~dvv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .||+|+..-.-      ...+....+.|+|+ |+++....
T Consensus       150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  188 (297)
T 2o57_A          150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  188 (297)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            79999864321      34578888999997 99987753

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=95.26  E-value=0.056  Score=51.97  Aligned_cols=79  Identities=20%  Similarity=0.359  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhH---HHHHhCCCceE-eCCCCCCccHHHHHHHH---hcCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC---EKAKAFGVTEF-LNPNDNNEPVQQVIKRI---TDGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~---~~~~~~G~~~~-~~~~~~~~~~~~~~~~~---~~~~~  264 (353)
                      +++++||+|+ |++|.++++.+...|+ +|+++++++...   +..++.+...+ .|..+ ..+..+.+.+.   .++.+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDVTA-DDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCTTS-TTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHHcCCCc
Confidence            5789999987 9999999999988999 898888764332   23344555432 23331 33343333332   22259


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++|+++|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999885

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.25  E-value=0.034  Score=51.48  Aligned_cols=133  Identities=12%  Similarity=0.091  Sum_probs=81.8

Q ss_pred             CEEEEEcCChHHHHHHHHHHHC-CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          195 STVVIFGLGTVGLSVAQGAKAR-GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~-g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|+..   +    .++.+.+.   ...+|+|+.|+
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~lvav~d~~~~~~~~~~~~~g~~~---~----~~~~~~l~---~~~~D~V~i~t   74 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKL-KLVTCYSRTEDKREKFGKRYNCAG---D----ATMEALLA---REDVEMVIITV   74 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSE-EEEEEECSSHHHHHHHHHHHTCCC---C----SSHHHHHH---CSSCCEEEECS
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCCCC---c----CCHHHHhc---CCCCCEEEEeC
Confidence            4789999999999888877766 77 554 568888877655 5567542   2    23444433   23799999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCceec-chhhhhc--CcEEEeeecCCCCCCCcHHHHHHHHHcCCC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA-HYGLFLS--GRTLKGSLFGGWKPKTDLPSLVNRYLKKVR  342 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i  342 (353)
                      ......+.+..++..  |+-|++..+-....-.. ......+  ++.+.-.+...+  ...+..+.+++++|+|
T Consensus        75 p~~~h~~~~~~al~~--gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~--~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           75 PNDKHAEVIEQCARS--GKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRR--LGALRKMKEMIDTKEI  144 (354)
T ss_dssp             CTTSHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGG--SHHHHHHHHHHHTTTT
T ss_pred             ChHHHHHHHHHHHHc--CCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhc--CHHHHHHHHHHhcCCC
Confidence            987778888888886  55555643322110001 1111222  444322222211  3568888999999987

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.24  E-value=0.074  Score=49.13  Aligned_cols=132  Identities=11%  Similarity=0.040  Sum_probs=80.5

Q ss_pred             CEEEEEcCChHHH-HHHHHHHHC-CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          195 STVVIFGLGTVGL-SVAQGAKAR-GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Gag~vG~-~a~~la~~~-g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -+|.|+|+|.+|. ..+..++.. ++ .++ +.++++++.+.+ +++|+...-       ++.+.+.   ...+|+|+.|
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~~~~~-------~~~~ll~---~~~~D~V~i~   96 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLT-EVTAIASRRWDRAKRFTERFGGEPVE-------GYPALLE---RDDVDAVYVP   96 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTE-EEEEEEESSHHHHHHHHHHHCSEEEE-------SHHHHHT---CTTCSEEEEC
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCe-EEEEEEcCCHHHHHHHHHHcCCCCcC-------CHHHHhc---CCCCCEEEEC
Confidence            4789999999998 566666666 77 555 557887776654 557765432       2333322   2379999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCCCCCceec-chhhhhc--CcEE-EeeecCCCCCCCcHHHHHHHHHcCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA-HYGLFLS--GRTL-KGSLFGGWKPKTDLPSLVNRYLKKVR  342 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~i-~g~~~~~~~~~~~~~~~~~~l~~g~i  342 (353)
                      +......+.+..++..  |+-|++.-+-....-.. ......+  ++.+ .++...   ....+..+.+++++|+|
T Consensus        97 tp~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R---~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           97 LPAVLHAEWIDRALRA--GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFL---HHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             CCGGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGG---GCTHHHHHHHHHHTTTT
T ss_pred             CCcHHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeccc---CCHHHHHHHHHHhcCCC
Confidence            9987778888888886  55566653322110011 1111222  4444 222222   13678899999999887

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=95.23  E-value=0.043  Score=50.08  Aligned_cols=98  Identities=14%  Similarity=0.106  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-C-----C--ceEeCCCCCCccHHHHHHHHhcCC
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-G-----V--TEFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G-----~--~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      ..+++||++|+| .|..+..+++..+..+|++++.+++-.+.+++. .     .  ..+-..   ..+..+.+.. ..+.
T Consensus       107 ~~~~~VLdIG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~---~~D~~~~l~~-~~~~  181 (314)
T 2b2c_A          107 PDPKRVLIIGGG-DGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF---CGDGFEFLKN-HKNE  181 (314)
T ss_dssp             SSCCEEEEESCT-TSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE---CSCHHHHHHH-CTTC
T ss_pred             CCCCEEEEEcCC-cCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE---EChHHHHHHh-cCCC
Confidence            456899999875 356666777765545999999999998888763 2     1  111111   2334444433 3458


Q ss_pred             ccEEEeccCC----------hHHHHHHHHHhccCCceEEEEc
Q 018627          264 ADYSFECIGD----------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       264 ~dvv~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ||+|+-....          ...+..+.+.|+++ |.++.-.
T Consensus       182 fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          182 FDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             EEEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            9999854421          35677888999997 9988764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.21  E-value=0.14  Score=45.86  Aligned_cols=93  Identities=12%  Similarity=0.119  Sum_probs=56.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC-----hhhHHHHH---hCCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-----PEKCEKAK---AFGVTEFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~-----~~~~~~~~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      ..+|||+|+ |.+|..+++.+...|. +|++++++     +++.+.++   ..++. ++..+  -.+ .+.+.+... ++
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D--~~d-~~~l~~~~~-~~   77 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEAS--LDD-HQRLVDALK-QV   77 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCC--SSC-HHHHHHHHT-TC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCC--CCC-HHHHHHHHh-CC
Confidence            467999998 9999999999988998 89888887     34444332   33443 33221  111 123333332 59


Q ss_pred             cEEEeccCCh------HHHHHHHHHhccC--CceEE
Q 018627          265 DYSFECIGDT------GMITTALQSCCDG--WGLAV  292 (353)
Q Consensus       265 dvv~d~~g~~------~~~~~~~~~l~~~--~G~~v  292 (353)
                      |+||.+++..      ......++.++..  -+++|
T Consensus        78 d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           78 DVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             SEEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             CEEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            9999998742      1233444555443  13776

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.20  E-value=0.039  Score=49.47  Aligned_cols=92  Identities=13%  Similarity=0.177  Sum_probs=56.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-------hhHHHH---HhCCCceE-eCCCCCCccHHHHHHHHhc
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-------EKCEKA---KAFGVTEF-LNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-------~~~~~~---~~~G~~~~-~~~~~~~~~~~~~~~~~~~  261 (353)
                      +++|||+|+ |.+|..+++.+...|. +|++++++.       ++.+.+   +..|+..+ .|..  +.   +.+.+...
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~--d~---~~l~~~~~   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIN--DH---ETLVKAIK   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTT--CH---HHHHHHHT
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCC--CH---HHHHHHHh
Confidence            467999998 9999999998888898 888888876       554433   33455433 2332  21   23333322


Q ss_pred             CCccEEEeccCCh--HHHHHHHHHhccC--CceEE
Q 018627          262 GGADYSFECIGDT--GMITTALQSCCDG--WGLAV  292 (353)
Q Consensus       262 ~~~dvv~d~~g~~--~~~~~~~~~l~~~--~G~~v  292 (353)
                       ++|+||++++..  ......++.++..  -.++|
T Consensus        76 -~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           76 -QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             -TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             -CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence             599999998752  2233344444432  14676

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.20  E-value=0.074  Score=48.59  Aligned_cols=132  Identities=14%  Similarity=0.096  Sum_probs=81.2

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          196 TVVIFGLGTVGLSVAQGAKAR-GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~-g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|+.    +.    ++.+.+.   ...+|+|+.|+.
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~----~~----~~~~~l~---~~~~D~V~i~tp   72 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE----VR----TIDAIEA---AADIDAVVICTP   72 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE----EC----CHHHHHH---CTTCCEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC----cC----CHHHHhc---CCCCCEEEEeCC
Confidence            688999999999888877765 67 555 578888876654 557765    21    2333333   236999999998


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCceec-chhhhhc--CcEEEeeecCCCCCCCcHHHHHHHHHcCCCC
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA-HYGLFLS--GRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~  343 (353)
                      .....+.+..++..  |+-|++..+-....-.. ......+  ++.+.-.+...  ....+..+.+++++|+|-
T Consensus        73 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r--~~p~~~~~~~~i~~g~iG  142 (331)
T 4hkt_A           73 TDTHADLIERFARA--GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRR--FDPHFMAVRKAIDDGRIG  142 (331)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGG--GCHHHHHHHHHHHTTTTC
T ss_pred             chhHHHHHHHHHHc--CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEccccc--CCHHHHHHHHHHHcCCCC
Confidence            87777888888876  55566643322110011 1111222  44443222221  135688899999998863

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=95.14  E-value=0.095  Score=48.39  Aligned_cols=87  Identities=15%  Similarity=0.295  Sum_probs=57.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++..+.+...  |+..+       .++.+.+.     ..|+|+-++.
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~--g~~~~-------~~l~ell~-----~sDvV~l~~P  236 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGL-AIHYHNRTRLSHALEE--GAIYH-------DTLDSLLG-----ASDIFLIAAP  236 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHT--TCEEC-------SSHHHHHH-----TCSEEEECSC
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCC-EEEEECCCCcchhhhc--CCeEe-------CCHHHHHh-----hCCEEEEecC
Confidence            37899999999999999999999999 9999988765443322  43211       12333333     2677777665


Q ss_pred             Ch-H---HH-HHHHHHhccCCceEEEEc
Q 018627          273 DT-G---MI-TTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       273 ~~-~---~~-~~~~~~l~~~~G~~v~~g  295 (353)
                      .. +   .+ ...+..|+++ ..+|.++
T Consensus       237 lt~~T~~li~~~~l~~mk~g-ailIN~a  263 (345)
T 4g2n_A          237 GRPELKGFLDHDRIAKIPEG-AVVINIS  263 (345)
T ss_dssp             CCGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred             CCHHHHHHhCHHHHhhCCCC-cEEEECC
Confidence            31 1   11 4455667775 6666665

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.14  E-value=0.21  Score=45.76  Aligned_cols=133  Identities=14%  Similarity=0.129  Sum_probs=80.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          196 TVVIFGLGTVGLSVAQGAKAR-GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~-g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|.....      .++.+.+.   ...+|+|+.|+.
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~------~~~~~ll~---~~~~D~V~i~tp   73 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAY------KDPHELIE---DPNVDAVLVCSS   73 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEE------SSHHHHHH---CTTCCEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCcee------CCHHHHhc---CCCCCEEEEcCC
Confidence            688999999998877766654 66 555 568888876654 557765443      23333333   236999999999


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCcee--cchhhhhc--CcEEEeeecCCCCCCCcHHHHHHHHHcCCCC
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVA--AHYGLFLS--GRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~--~~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~  343 (353)
                      .....+.+..++..  |+-|++.-+-. .+..  .......+  ++.+.-.+...+  ...+..+.+++++|+|-
T Consensus        74 ~~~h~~~~~~al~~--gk~v~~EKP~~-~~~~e~~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~G~iG  143 (344)
T 3ezy_A           74 TNTHSELVIACAKA--KKHVFCEKPLS-LNLADVDRMIEETKKADVILFTGFNRRF--DRNFKKLKEAVENGTIG  143 (344)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESCSC-SCHHHHHHHHHHHHHHTCCEEEECGGGG--CHHHHHHHHHHHTTTTS
T ss_pred             CcchHHHHHHHHhc--CCeEEEECCCC-CCHHHHHHHHHHHHHhCCcEEEeecccC--CHHHHHHHHHHHcCCCC
Confidence            87777778788876  55555643322 1111  11111222  444422222211  35688889999998763

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=95.14  E-value=0.057  Score=51.24  Aligned_cols=83  Identities=25%  Similarity=0.270  Sum_probs=50.7

Q ss_pred             ccCCCCCEEEEEcC-ChHHHH--HHHHHHHCCCCeEEEEcCChhh----------------HHHHHhCCCceE-e--CCC
Q 018627          189 ADISKGSTVVIFGL-GTVGLS--VAQGAKARGASRIIGVDTNPEK----------------CEKAKAFGVTEF-L--NPN  246 (353)
Q Consensus       189 ~~~~~g~~vLV~Ga-g~vG~~--a~~la~~~g~~~vi~~~~~~~~----------------~~~~~~~G~~~~-~--~~~  246 (353)
                      .....|+++||+|+ +++|++  .+......|+ +|++++++.+.                .+.+++.|.... +  |..
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvt  133 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAF  133 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCC
Confidence            44577999999997 899998  5555555599 88888775322                223455665432 2  322


Q ss_pred             CCCccHHHHHHHHh--cCCccEEEeccCC
Q 018627          247 DNNEPVQQVIKRIT--DGGADYSFECIGD  273 (353)
Q Consensus       247 ~~~~~~~~~~~~~~--~~~~dvv~d~~g~  273 (353)
                      + ..+..+.+....  -+++|++++++|.
T Consensus       134 d-~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          134 S-NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             C-HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             C-HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            1 223333333322  2489999999875

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.13  E-value=0.033  Score=49.17  Aligned_cols=88  Identities=18%  Similarity=0.162  Sum_probs=58.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      .+ +++|+|+|++|.+++..+...|+++|+++.|+.++.+.+.+ ++.   ..+    .++.+.+.     .+|+||+|+
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~----~~~~~~~~-----~aDiVInat  174 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSL----DQLDEVVK-----KAKSLFNTT  174 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEG----GGHHHHHH-----TCSEEEECS
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCH----HHHHhhhc-----CCCEEEECC
Confidence            46 89999999999999999999999889999999888665532 221   111    22333332     489999988


Q ss_pred             CCh-----HHHHHHHHHhccCCceEEEEcC
Q 018627          272 GDT-----GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       272 g~~-----~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +..     ..+  ....++++ ..++.+-.
T Consensus       175 p~gm~p~~~~i--~~~~l~~~-~~V~Divy  201 (253)
T 3u62_A          175 SVGMKGEELPV--SDDSLKNL-SLVYDVIY  201 (253)
T ss_dssp             STTTTSCCCSC--CHHHHTTC-SEEEECSS
T ss_pred             CCCCCCCCCCC--CHHHhCcC-CEEEEeeC
Confidence            531     111  12446664 66666643

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=95.12  E-value=0.069  Score=44.79  Aligned_cols=73  Identities=16%  Similarity=0.256  Sum_probs=46.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCC-ccHHHHHHHHhcCCccEEEecc
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNN-EPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~-~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +++||+|+ |++|..+++.+...   +|+++++++++.+.+.+ ++. ..+..+-.+ ..+.+.+.+  .+++|++|+++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~a   74 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAV   74 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECC
Confidence            46899998 89999887776555   89999999887765533 333 333222112 222222222  24799999998


Q ss_pred             CC
Q 018627          272 GD  273 (353)
Q Consensus       272 g~  273 (353)
                      |.
T Consensus        75 g~   76 (207)
T 2yut_A           75 GK   76 (207)
T ss_dssp             CC
T ss_pred             Cc
Confidence            74

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=95.10  E-value=0.12  Score=48.76  Aligned_cols=102  Identities=14%  Similarity=0.155  Sum_probs=69.5

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      .+...+.++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++.+.......-  ..+..+.+. ..++.||
T Consensus       100 ~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~--~~~~~~~l~-~~~~~fD  173 (416)
T 4e2x_A          100 LATELTGPDPFIVEIGCND-GIMLRTIQE-AGV-RHLGFEPSSGVAAKAREKGIRVRTDFF--EKATADDVR-RTEGPAN  173 (416)
T ss_dssp             HHTTTCSSSCEEEEETCTT-TTTHHHHHH-TTC-EEEEECCCHHHHHHHHTTTCCEECSCC--SHHHHHHHH-HHHCCEE
T ss_pred             HHHhCCCCCCEEEEecCCC-CHHHHHHHH-cCC-cEEEECCCHHHHHHHHHcCCCcceeee--chhhHhhcc-cCCCCEE
Confidence            3455677899999998753 555555554 477 999999999999999888766544321  122222222 2245899


Q ss_pred             EEEeccC-----C-hHHHHHHHHHhccCCceEEEE
Q 018627          266 YSFECIG-----D-TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       266 vv~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      +|+..-.     . ...+....+.|+++ |+++..
T Consensus       174 ~I~~~~vl~h~~d~~~~l~~~~r~Lkpg-G~l~i~  207 (416)
T 4e2x_A          174 VIYAANTLCHIPYVQSVLEGVDALLAPD-GVFVFE  207 (416)
T ss_dssp             EEEEESCGGGCTTHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEECChHHhcCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            9996432     1 34578888999997 998875

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.10  E-value=0.12  Score=45.42  Aligned_cols=102  Identities=20%  Similarity=0.294  Sum_probs=67.8

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc---eEeCCCCCCccHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIK  257 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~---~~~~~~~~~~~~~~~~~  257 (353)
                      +.+...+.++++||-+|+| .|..+..+++..+. +|++++.+++.++.+++    .|..   .++..+  ..++     
T Consensus        53 l~~~~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~-----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCG-IGKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYAD--AMDL-----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCT-TSHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC--TTSC-----
T ss_pred             HHHhcCCCCCCEEEEeCCC-CCHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECc--cccC-----
Confidence            3456678899999999986 37777788887787 99999999988777654    3432   222211  1110     


Q ss_pred             HHhcCCccEEEecc-----CC-hHHHHHHHHHhccCCceEEEEcC
Q 018627          258 RITDGGADYSFECI-----GD-TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       258 ~~~~~~~dvv~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ...++.||+|+..-     .. ...+....+.|+++ |+++....
T Consensus       124 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~  167 (273)
T 3bus_A          124 PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIADF  167 (273)
T ss_dssp             CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEEE
T ss_pred             CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEEe
Confidence            01124799998532     11 34567777889997 99887653

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=95.09  E-value=0.082  Score=47.52  Aligned_cols=68  Identities=18%  Similarity=0.296  Sum_probs=38.3

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +++|||+|+ |.+|..+++.+...|. +|++++++.++.      + ....|..+ ...+.+.+...   ++|+||++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~------~-~~~~Dl~d-~~~~~~~~~~~---~~d~vih~A~   69 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNW-HAVGCGFRRARP------K-FEQVNLLD-SNAVHHIIHDF---QPHVIVHCAA   69 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEC--------------------------CHHHHHHH---CCSEEEECC-
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCC-eEEEEccCCCCC------C-eEEecCCC-HHHHHHHHHhh---CCCEEEECCc
Confidence            468999998 9999999999988998 999998765431      1 11112221 12222233221   6899999987


Q ss_pred             C
Q 018627          273 D  273 (353)
Q Consensus       273 ~  273 (353)
                      .
T Consensus        70 ~   70 (315)
T 2ydy_A           70 E   70 (315)
T ss_dssp             -
T ss_pred             c
Confidence            4

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=95.08  E-value=0.088  Score=44.57  Aligned_cols=102  Identities=19%  Similarity=0.177  Sum_probs=67.4

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHH-HhcC-Cc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR-ITDG-GA  264 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~-~~  264 (353)
                      +.....++.+||-+|+| .|..+..+++. |. +|++++.+++.++.+++.+...++..     ++.+.... ...+ .|
T Consensus        46 ~~~~~~~~~~vLdiG~G-~G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-----~~~~~~~~~~~~~~~f  117 (227)
T 3e8s_A           46 LAILGRQPERVLDLGCG-EGWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHLA-----SYAQLAEAKVPVGKDY  117 (227)
T ss_dssp             HHHHHTCCSEEEEETCT-TCHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEEC-----CHHHHHTTCSCCCCCE
T ss_pred             HHhhcCCCCEEEEeCCC-CCHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccchh-----hHHhhcccccccCCCc
Confidence            33445677999999875 35555666655 87 99999999999999988743333322     22221111 1233 59


Q ss_pred             cEEEeccC-----ChHHHHHHHHHhccCCceEEEEcCC
Q 018627          265 DYSFECIG-----DTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       265 dvv~d~~g-----~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      |+|+....     ....+....+.|+++ |+++.....
T Consensus       118 D~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~~~  154 (227)
T 3e8s_A          118 DLICANFALLHQDIIELLSAMRTLLVPG-GALVIQTLH  154 (227)
T ss_dssp             EEEEEESCCCSSCCHHHHHHHHHTEEEE-EEEEEEECC
T ss_pred             cEEEECchhhhhhHHHHHHHHHHHhCCC-eEEEEEecC
Confidence            99987532     235678888999997 999887543

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=95.07  E-value=0.072  Score=47.79  Aligned_cols=45  Identities=27%  Similarity=0.352  Sum_probs=36.6

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      .++++||-+|+| .|..++.+++..+..+|+++|.++.-++.+++.
T Consensus        45 ~~~~~VLDiGCG-~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCN-VGHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCT-TCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCC-CCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            468999999986 477788888887555999999999988888663

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.07  E-value=0.13  Score=43.89  Aligned_cols=75  Identities=15%  Similarity=0.197  Sum_probs=54.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +|+|.|+|.+|..+++.+...|. .|+++++++++.+.+. +.|...+. -+  ..+ .+.+++..-..+|+++-+++..
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i~-gd--~~~-~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATIIH-GD--GSH-KEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEEE-SC--TTS-HHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEEE-cC--CCC-HHHHHhcCcccCCEEEEecCCc
Confidence            58899999999999999999999 8999999999988764 46654332 21  111 2334443233799999999874


Q ss_pred             H
Q 018627          275 G  275 (353)
Q Consensus       275 ~  275 (353)
                      .
T Consensus        77 ~   77 (218)
T 3l4b_C           77 E   77 (218)
T ss_dssp             H
T ss_pred             H
Confidence            3

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.06  E-value=0.045  Score=47.17  Aligned_cols=101  Identities=19%  Similarity=0.267  Sum_probs=65.7

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc---eEeCCCCCCccHHHHHHHHhc
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT---EFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~---~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      +.+.....++.+||-+|+|. |..+..+++. +..++++++.+++.++.+++....   .++..+  ...+     ....
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d--~~~~-----~~~~  105 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERAD--LDKL-----HLPQ  105 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECC--GGGC-----CCCT
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcC--hhhc-----cCCC
Confidence            34455667889999998753 5566666665 555899999999999988775432   122111  0110     0123


Q ss_pred             CCccEEEeccCC------hHHHHHHHHHhccCCceEEEEc
Q 018627          262 GGADYSFECIGD------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       262 ~~~dvv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +.||+|+....-      ...+..+.+.|+++ |+++..-
T Consensus       106 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          106 DSFDLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCceEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            479999865321      34567788899997 9988754

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.05  E-value=0.044  Score=50.13  Aligned_cols=69  Identities=19%  Similarity=0.290  Sum_probs=45.5

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      ..+++|||+|+ |.+|..+++.+...|. +|+++++++++      .++..+. |..  +.   +.+.+... ++|+||.
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~------~~~~~~~~Dl~--d~---~~~~~~~~-~~d~vih   83 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG------TGGEEVVGSLE--DG---QALSDAIM-GVSAVLH   83 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS------SCCSEEESCTT--CH---HHHHHHHT-TCSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC------CCccEEecCcC--CH---HHHHHHHh-CCCEEEE
Confidence            45788999998 9999999999999998 89998888765      2333322 222  22   22222222 6999999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      +++.
T Consensus        84 ~A~~   87 (347)
T 4id9_A           84 LGAF   87 (347)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            8864

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.05  E-value=0.036  Score=49.98  Aligned_cols=37  Identities=35%  Similarity=0.481  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK  230 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~  230 (353)
                      .|++|.|+|.|.+|..+++.++..|. +|++.+++.++
T Consensus       121 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~~~  157 (290)
T 3gvx_A          121 YGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSSVD  157 (290)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSCCC
T ss_pred             ecchheeeccCchhHHHHHHHHhhCc-EEEEEeccccc
Confidence            47899999999999999999999999 99999887654

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=95.02  E-value=0.074  Score=47.53  Aligned_cols=73  Identities=26%  Similarity=0.329  Sum_probs=49.5

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCC-CCeEEEEcCChhhH--HHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKC--EKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g-~~~vi~~~~~~~~~--~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      .++|||+|+ |.+|..+++.+...| . +|++++++.++.  +.+...++..+. |..  +   .+.+.+... ++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~--d---~~~l~~~~~-~~d~vi   77 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAEVVQGDQD--D---QVIMELALN-GAYATF   77 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCEEEECCTT--C---HHHHHHHHT-TCSEEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCEEEEecCC--C---HHHHHHHHh-cCCEEE
Confidence            478999998 999999999888878 7 899998887664  333445654332 222  2   123333322 599999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      .+++.
T Consensus        78 ~~a~~   82 (299)
T 2wm3_A           78 IVTNY   82 (299)
T ss_dssp             ECCCH
T ss_pred             EeCCC
Confidence            99873

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.02  E-value=0.027  Score=51.39  Aligned_cols=72  Identities=14%  Similarity=0.193  Sum_probs=47.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+|||+|+ |.+|..+++.+...|. +|++++++.++.+.+.+.++..+. |..  +   .+.+.+... ++|+||++++
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~~~~Dl~--d---~~~~~~~~~-~~d~vih~a~   86 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPECRVAEML--D---HAGLERALR-GLDGVIFSAG   86 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEEEECCTT--C---HHHHHHHTT-TCSEEEEC--
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEEEEecCC--C---HHHHHHHHc-CCCEEEECCc
Confidence            47999998 9999999999999998 999998887765444333443321 222  2   123333332 5999999987


Q ss_pred             C
Q 018627          273 D  273 (353)
Q Consensus       273 ~  273 (353)
                      .
T Consensus        87 ~   87 (342)
T 2x4g_A           87 Y   87 (342)
T ss_dssp             -
T ss_pred             c
Confidence            4

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.01  E-value=0.036  Score=50.25  Aligned_cols=101  Identities=17%  Similarity=0.085  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC--------CceEeCCCCCCccHHHHHHHHhcC
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--------VTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G--------~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ..++++||++|+| .|..+..+++..+..+|++++.+++-.+.+++.-        ...+-..   ..+..+.+.....+
T Consensus        93 ~~~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~~~~~~~~  168 (304)
T 3bwc_A           93 HPKPERVLIIGGG-DGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVR---VGDGLAFVRQTPDN  168 (304)
T ss_dssp             SSSCCEEEEEECT-TSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHHHSSCTT
T ss_pred             CCCCCeEEEEcCC-CCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEE---ECcHHHHHHhccCC
Confidence            3567899999875 3556666776655459999999999888876531        1111111   12333333321244


Q ss_pred             CccEEEeccCC----------hHHHHHHHHHhccCCceEEEEcC
Q 018627          263 GADYSFECIGD----------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       263 ~~dvv~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .||+|+-....          ...+..+.+.|+++ |.++....
T Consensus       169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             CEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            89998864421          35677888999997 99988643

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=95.01  E-value=0.11  Score=49.89  Aligned_cols=103  Identities=17%  Similarity=0.209  Sum_probs=65.0

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ..++++|++||-.|+|+ |..++++|..+ +...|++++.++++++.+++    +|...+....   .+.. .+....++
T Consensus       100 ~L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~---~Da~-~l~~~~~~  174 (456)
T 3m4x_A          100 AAAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN---HAPA-ELVPHFSG  174 (456)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC---CCHH-HHHHHHTT
T ss_pred             HcCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe---CCHH-Hhhhhccc
Confidence            34678999999987642 33344555543 33489999999999887743    6765433222   2222 22222345


Q ss_pred             CccEEEe---ccCCh-------------------------HHHHHHHHHhccCCceEEEEcC
Q 018627          263 GADYSFE---CIGDT-------------------------GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       263 ~~dvv~d---~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .||+|+-   |+|..                         ..+..+++.|+++ |+++....
T Consensus       175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTC  235 (456)
T 3m4x_A          175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK-GQLIYSTC  235 (456)
T ss_dssp             CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE-EEEEEEES
T ss_pred             cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            8998875   44421                         4577788899997 99986554

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.01  E-value=0.041  Score=48.83  Aligned_cols=100  Identities=16%  Similarity=0.164  Sum_probs=62.6

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE--eCCCCCCccHHHHHHHHhcCC
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      .+...+.++++||-+|+| .|..+..+++. |+ +|++++.+++-++.+++.-....  .+..+....    ......+.
T Consensus        38 l~~l~l~~g~~VLDlGcG-tG~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~----~~~~~~~~  110 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAS-TRFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAE----IPKELAGH  110 (261)
T ss_dssp             HHTTTCCTTCEEEEECTT-CHHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSC----CCGGGTTC
T ss_pred             HHhcCCCCcCEEEEEeCc-chHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccc----cccccCCC
Confidence            355678899999999986 57777777764 77 99999999999988876321111  111100000    00111347


Q ss_pred             ccEEEeccCC--------hHHHHHHHHHhccCCceEEEE
Q 018627          264 ADYSFECIGD--------TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       264 ~dvv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ||+|+-+..-        ...+....+.+ |+ |+++..
T Consensus       111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            9999875321        12455566678 97 998865

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=94.98  E-value=0.033  Score=51.13  Aligned_cols=93  Identities=16%  Similarity=0.114  Sum_probs=57.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hhHHHH---HhCCCceEe-CCCCCCccHHHHHHHHhcC-C
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKA---KAFGVTEFL-NPNDNNEPVQQVIKRITDG-G  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~----~~~~~~---~~~G~~~~~-~~~~~~~~~~~~~~~~~~~-~  263 (353)
                      ..+|||+|+ |.+|..++..+...|. +|++++++.    ++.+.+   +..++..+. |..  +   .+.+.+.... +
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~--d---~~~l~~~~~~~~   83 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLIN--E---QEAMEKILKEHE   83 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTT--C---HHHHHHHHHHTT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecC--C---HHHHHHHHhhCC
Confidence            357999998 9999999999999997 888888876    454433   334554432 332  2   2223332222 7


Q ss_pred             ccEEEeccCCh--HHHHHHHHHhccCCc---eEEE
Q 018627          264 ADYSFECIGDT--GMITTALQSCCDGWG---LAVT  293 (353)
Q Consensus       264 ~dvv~d~~g~~--~~~~~~~~~l~~~~G---~~v~  293 (353)
                      +|+||.+++..  ......++.++.. |   +++.
T Consensus        84 ~d~Vi~~a~~~n~~~~~~l~~aa~~~-g~v~~~v~  117 (346)
T 3i6i_A           84 IDIVVSTVGGESILDQIALVKAMKAV-GTIKRFLP  117 (346)
T ss_dssp             CCEEEECCCGGGGGGHHHHHHHHHHH-CCCSEEEC
T ss_pred             CCEEEECCchhhHHHHHHHHHHHHHc-CCceEEee
Confidence            99999998852  2233444555543 4   5663

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=94.96  E-value=0.19  Score=46.15  Aligned_cols=133  Identities=8%  Similarity=0.036  Sum_probs=82.7

Q ss_pred             CEEEEEcCChHHHH-HHHHHHHC-CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          195 STVVIFGLGTVGLS-VAQGAKAR-GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Gag~vG~~-a~~la~~~-g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -+|-|+|+|.+|.. .+...+.. ++ +++ +.++++++.+.+ +++|...++      .++.+.+.   ...+|+|+-|
T Consensus        24 irigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y------~d~~ell~---~~~iDaV~I~   93 (350)
T 4had_A           24 LRFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAF------GSYEEMLA---SDVIDAVYIP   93 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEE------SSHHHHHH---CSSCSEEEEC
T ss_pred             cEEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeee------CCHHHHhc---CCCCCEEEEe
Confidence            47889999999975 35555554 77 565 457777776554 668876554      23444443   2479999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCCCCCcee-cc-hhhhhc--CcEEEeeecCCCCCCCcHHHHHHHHHcCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-AH-YGLFLS--GRTLKGSLFGGWKPKTDLPSLVNRYLKKVR  342 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~-~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i  342 (353)
                      +......+.+.+++..  |+=|++.-+-. .+.. .. .....+  ++.+.-.+...+  ...+.++.+++++|+|
T Consensus        94 tP~~~H~~~~~~al~a--GkhVl~EKPla-~~~~ea~~l~~~a~~~~~~l~v~~~~R~--~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           94 LPTSQHIEWSIKAADA--GKHVVCEKPLA-LKAGDIDAVIAARDRNKVVVTEAYMITY--SPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSCCC-SSGGGGHHHHHHHHHHTCCEEECCGGGG--SHHHHHHHHHHHTTTT
T ss_pred             CCCchhHHHHHHHHhc--CCEEEEeCCcc-cchhhHHHHHHHHHHcCCceeEeeeeec--CHHHHHhhHhhhcCCC
Confidence            9987888888888886  67777754332 1111 11 111122  444322221211  3568889999999987

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=94.92  E-value=0.016  Score=51.99  Aligned_cols=93  Identities=8%  Similarity=0.009  Sum_probs=58.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+++++|+|+|++|.+++..+...|+++|+++.|+.++.+.+.+ .. ...       .+. .+.+. -..+|+||++++
T Consensus       116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~-~~-~~~-------~~~-~~~~~-~~~aDiVInaTp  184 (277)
T 3don_A          116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL-NI-NKI-------NLS-HAESH-LDEFDIIINTTP  184 (277)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS-CC-EEE-------CHH-HHHHT-GGGCSEEEECCC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-hc-ccc-------cHh-hHHHH-hcCCCEEEECcc
Confidence            57899999999999999999999999889999999887654432 11 111       122 22221 125899999986


Q ss_pred             ChHHHH----HHHHHhccCCceEEEEcCC
Q 018627          273 DTGMIT----TALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~~~~~----~~~~~l~~~~G~~v~~g~~  297 (353)
                      ....-.    .....++++ ..++++...
T Consensus       185 ~Gm~~~~~~~l~~~~l~~~-~~V~D~vY~  212 (277)
T 3don_A          185 AGMNGNTDSVISLNRLASH-TLVSDIVYN  212 (277)
T ss_dssp             -------CCSSCCTTCCSS-CEEEESCCS
T ss_pred             CCCCCCCcCCCCHHHcCCC-CEEEEecCC
Confidence            421100    012346664 666777544

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=94.91  E-value=0.046  Score=46.00  Aligned_cols=97  Identities=10%  Similarity=0.115  Sum_probs=63.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC----ceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV----TEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~----~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      +.++++||.+|+|. |..+..+++. |..++++++.++..++.+++...    ..++..+  ...+     ...++.||+
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d--~~~~-----~~~~~~fD~  110 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMD--VRKL-----DFPSASFDV  110 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECC--TTSC-----CSCSSCEEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcc--hhcC-----CCCCCcccE
Confidence            47889999999864 6666677765 54489999999999888876321    1222111  1111     112347999


Q ss_pred             EEeccC---------------------ChHHHHHHHHHhccCCceEEEEcCC
Q 018627          267 SFECIG---------------------DTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       267 v~d~~g---------------------~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      |+....                     ....+..+.+.|+++ |+++.+...
T Consensus       111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~  161 (215)
T 2pxx_A          111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTSA  161 (215)
T ss_dssp             EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeCC
Confidence            996321                     134567778899997 999988654

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=94.90  E-value=0.091  Score=48.04  Aligned_cols=135  Identities=13%  Similarity=0.029  Sum_probs=80.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHC-CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          195 STVVIFGLGTVGLSVAQGAKAR-GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~-g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -+|.|+|+|.+|...+..++.. ++ +++ +.++++++.+.+ +++|.....      .++.+.+.   ...+|+|+.|+
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~------~~~~~ll~---~~~~D~V~i~t   75 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAY------GSYEELCK---DETIDIIYIPT   75 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCB------SSHHHHHH---CTTCSEEEECC
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCcee------CCHHHHhc---CCCCCEEEEcC
Confidence            4788999999998888877775 66 565 457777776554 557753221      23443433   23699999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCceec-chhhhhc--CcEEEeeecCCCCCCCcHHHHHHHHHcCCCC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA-HYGLFLS--GRTLKGSLFGGWKPKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~i~g~~~~~~~~~~~~~~~~~~l~~g~i~  343 (353)
                      ......+.+..++..  |+-|++..+-....-.. ......+  ++.+.-.+...  ....+..+.+++++|+|-
T Consensus        76 p~~~h~~~~~~al~~--gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r--~~p~~~~~k~~i~~g~iG  146 (330)
T 3e9m_A           76 YNQGHYSAAKLALSQ--GKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSV--FLPITQKVKATIQEGGLG  146 (330)
T ss_dssp             CGGGHHHHHHHHHHT--TCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGG--GCHHHHHHHHHHHTTTTC
T ss_pred             CCHHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhh--hCHHHHHHHHHHhCCCCC
Confidence            987777888888887  44455543322110001 1111222  44332222111  135688899999998873

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=94.90  E-value=0.048  Score=47.53  Aligned_cols=97  Identities=14%  Similarity=0.151  Sum_probs=66.7

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce---EeCCCCCCccHHHHHHHHhc
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~---~~~~~~~~~~~~~~~~~~~~  261 (353)
                      ..+.++++||-+|+| .|..+..+++..+. +|++++.+++.++.+++    .|...   ++..+  ..++     ...+
T Consensus        42 ~~~~~~~~vLDiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~-----~~~~  112 (257)
T 3f4k_A           42 NELTDDAKIADIGCG-TGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGS--MDNL-----PFQN  112 (257)
T ss_dssp             CCCCTTCEEEEETCT-TSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC--TTSC-----SSCT
T ss_pred             hcCCCCCeEEEeCCC-CCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECC--hhhC-----CCCC
Confidence            367889999999987 48888888988877 99999999988877644    44321   22111  1111     0113


Q ss_pred             CCccEEEec-----cCChHHHHHHHHHhccCCceEEEEc
Q 018627          262 GGADYSFEC-----IGDTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       262 ~~~dvv~d~-----~g~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +.||+|+..     ......+..+.+.|+|+ |+++...
T Consensus       113 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          113 EELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             TCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            489999753     22245678888899997 9998775

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=94.88  E-value=0.086  Score=43.33  Aligned_cols=100  Identities=13%  Similarity=0.027  Sum_probs=65.8

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc----eEeCCCCCCccHHHHHH
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT----EFLNPNDNNEPVQQVIK  257 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~----~~~~~~~~~~~~~~~~~  257 (353)
                      .+....+++++||-+|+| .|..+..+++. +. ++++++.+++..+.+++    .+..    .++..+  ..+.     
T Consensus        45 ~~~~~~~~~~~vLdiG~G-~G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d--~~~~-----  114 (194)
T 1dus_A           45 VENVVVDKDDDILDLGCG-YGVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD--LYEN-----  114 (194)
T ss_dssp             HHHCCCCTTCEEEEETCT-TSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS--TTTT-----
T ss_pred             HHHcccCCCCeEEEeCCC-CCHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECc--hhcc-----
Confidence            355667789999999875 46666677766 66 99999999988877754    2433    222211  1110     


Q ss_pred             HHhcCCccEEEeccCC-------hHHHHHHHHHhccCCceEEEEcCC
Q 018627          258 RITDGGADYSFECIGD-------TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g~-------~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                       ...+.+|+|+-...-       ...+..+.+.++++ |+++.....
T Consensus       115 -~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  159 (194)
T 1dus_A          115 -VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVVIQT  159 (194)
T ss_dssp             -CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             -cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCC-CEEEEEECC
Confidence             113479999865431       24566777889997 999887654

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=94.88  E-value=0.059  Score=49.66  Aligned_cols=36  Identities=25%  Similarity=0.322  Sum_probs=31.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH--CCCCeEEEEcCChh
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKA--RGASRIIGVDTNPE  229 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~--~g~~~vi~~~~~~~  229 (353)
                      .+++|||+|+ |.+|..+++.+..  .|+ +|++++++..
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~   47 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRS   47 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCc
Confidence            5789999998 9999999999888  899 9999987654

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=94.86  E-value=0.19  Score=44.56  Aligned_cols=105  Identities=14%  Similarity=0.151  Sum_probs=65.0

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHH--h
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI--T  260 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~--~  260 (353)
                      ..++++|++||-.|+| .|..+..++..+ +..+|++++.++++++.+++    .|...+....   .+..+.....  .
T Consensus        78 ~l~~~~g~~VLDlgaG-~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~---~D~~~~~~~~~~~  153 (274)
T 3ajd_A           78 VLNPREDDFILDMCAA-PGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN---ADMRKYKDYLLKN  153 (274)
T ss_dssp             HHCCCTTCEEEETTCT-TCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCHHHHHHHHHHT
T ss_pred             HhCCCCcCEEEEeCCC-ccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe---CChHhcchhhhhc
Confidence            3467899999988764 344555666654 43499999999998887644    5654322111   2222222111  1


Q ss_pred             cCCccEEEe---ccCC---------------------hHHHHHHHHHhccCCceEEEEcCC
Q 018627          261 DGGADYSFE---CIGD---------------------TGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       261 ~~~~dvv~d---~~g~---------------------~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .+.||+|+-   |.|.                     ...+..+++.++++ |+++.....
T Consensus       154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~stcs  213 (274)
T 3ajd_A          154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYSTCS  213 (274)
T ss_dssp             TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEECC
Confidence            348998875   3331                     34577788899997 999876543

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=94.83  E-value=0.083  Score=47.30  Aligned_cols=73  Identities=19%  Similarity=0.267  Sum_probs=47.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh------hhHHHH---HhCCCceE-eCCCCCCccHHHHHHHHhcC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP------EKCEKA---KAFGVTEF-LNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~------~~~~~~---~~~G~~~~-~~~~~~~~~~~~~~~~~~~~  262 (353)
                      .++|||+|+ |.+|..++..+...|. +|++++++.      ++.+.+   +..|+..+ .|..  +.   +.+.+... 
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~--d~---~~l~~~~~-   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID--DH---ASLVEAVK-   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTT--CH---HHHHHHHH-
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccC--CH---HHHHHHHc-
Confidence            467999998 9999999999999998 888888863      344333   23454432 1222  21   22333222 


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+||.+++.
T Consensus        77 ~~d~vi~~a~~   87 (308)
T 1qyc_A           77 NVDVVISTVGS   87 (308)
T ss_dssp             TCSEEEECCCG
T ss_pred             CCCEEEECCcc
Confidence            59999999875

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=94.83  E-value=0.066  Score=47.74  Aligned_cols=98  Identities=14%  Similarity=0.113  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C-----CC--ceEeCCCCCCccHHHHHHHHhcCC
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F-----GV--TEFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~-----G~--~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      ..+++||++|+| .|..+..+++..+..+|++++.+++-.+.+++ +     +.  ..+-..   ..+..+.+.. ..+.
T Consensus        74 ~~~~~VLdiG~G-~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~---~~D~~~~l~~-~~~~  148 (275)
T 1iy9_A           74 PNPEHVLVVGGG-DGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQ---VDDGFMHIAK-SENQ  148 (275)
T ss_dssp             SSCCEEEEESCT-TCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEE---ESCSHHHHHT-CCSC
T ss_pred             CCCCEEEEECCc-hHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEE---ECcHHHHHhh-CCCC
Confidence            357899999875 35555666666666699999999998888866 2     21  111111   1122233332 2348


Q ss_pred             ccEEEeccCC----------hHHHHHHHHHhccCCceEEEEc
Q 018627          264 ADYSFECIGD----------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       264 ~dvv~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ||+|+-....          ...+..+.+.|+++ |.++.-.
T Consensus       149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            9988865432          35788889999997 9998764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=94.82  E-value=0.078  Score=48.86  Aligned_cols=36  Identities=19%  Similarity=0.331  Sum_probs=28.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK  230 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~  230 (353)
                      +++|||+|+ |.+|..+++.+...|. +|++++++.++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~   37 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASS   37 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC----
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence            368999998 9999999999988998 99999887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	353
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	4e-45
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	2e-40
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	9e-40
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-39
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	2e-39
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	3e-39
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	9e-39
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	2e-37
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	4e-35
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	4e-33
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-32
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-29
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	4e-27
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	2e-19
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	3e-19
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	6e-18
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	5e-17
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	1e-16
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	1e-15
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	1e-14
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	4e-14
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	8e-14
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	3e-12
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	4e-12
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	1e-11
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	2e-11
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	3e-11
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	5e-11
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	1e-10
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	5e-08
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-07
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	2e-06
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	5e-06
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	7e-06
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	3e-04
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	5e-04
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	8e-04
d1hwxa1	293	c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (	0.001
d2g5ca2	171	c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {	0.002
d1v3va1	147	b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd	0.004

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  150 bits (380), Expect = 4e-45
 Identities = 80/175 (45%), Positives = 106/175 (60%)

Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
           AP EK+CL+ CG S G GAA     +  GST V+FGLG VGLSV  G K+ GASRIIG+D
Sbjct: 2   APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61

Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
            N +K EKA A G TE ++P D+ +P+ +V+  +T     Y+FE IG    +  AL SC 
Sbjct: 62  LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121

Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
             +G +V +GVP     +     L  +GRT KG +FGG K + D+P LV  +L K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  138 bits (348), Expect = 2e-40
 Identities = 83/175 (47%), Positives = 109/175 (62%), Gaps = 2/175 (1%)

Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
           APLE  CL+ CG + G GAA N A ++ GST  +FGLG VG S   G KA GASRIIGV 
Sbjct: 1   APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59

Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
           T+ +K  KA   G TE LNP D ++P+ +VI   T+GG DY+ EC G    +  ALQS  
Sbjct: 60  THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119

Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
            G G+ V LG+      +     L L+GR+LKGS+FGG+K + ++  LV+ Y+KK
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 173

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  136 bits (343), Expect = 9e-40
 Identities = 85/175 (48%), Positives = 119/175 (68%)

Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
           +PLEK+CL+ CG S G G+A  VA +++GST  +FGLG VGLSV  G KA GA+RIIGVD
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
            N +K  KAK  G TE +NP D  +P+Q+V+  +++GG D+SFE IG    + TAL  C 
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
           + +G++V +GVP     ++ +  L LSGRT KG++FGG+K K  +P LV  ++ K
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 175

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  137 bits (345), Expect = 1e-39
 Identities = 75/197 (38%), Positives = 106/197 (53%), Gaps = 3/197 (1%)

Query: 7   QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRI 66
             +VI CKAAVAW A +PLV+EE+EV+ P   EIRIK++ T +C +D+            
Sbjct: 3   VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF 62

Query: 67  F---GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGV 123
               GHE +GIVESVGPGVTEF  GE V+ +FI +C  CR C+S K+N C          
Sbjct: 63  PVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPD 122

Query: 124 MHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLG 183
           + S ++TRF+ KG+ V  +   S+FS+YTVV+     K+     L++       L +   
Sbjct: 123 VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVND 182

Query: 184 AAWNVADISKGSTVVIF 200
           A   +       TV+  
Sbjct: 183 AIDLMKHGKCIRTVLSL 199

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  136 bits (343), Expect = 2e-39
 Identities = 71/194 (36%), Positives = 109/194 (56%), Gaps = 3/194 (1%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPR 65
           +VI CKAAVAW AG+PL +EE+EV PP+  E+RIK++ T++C +D         +  FP 
Sbjct: 3   EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 62

Query: 66  IFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMH 125
           I GH  +GIVESVG GVT+   G+ V+ ++I +C  C+ C + K+N C+ + + +   + 
Sbjct: 63  ILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM 122

Query: 126 SDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAA 185
            D  +RF+ KGK + HY   S+FSEYTVV      K+  +  +++    +        A 
Sbjct: 123 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAF 182

Query: 186 WNVADISKGSTVVI 199
             +       TVV 
Sbjct: 183 ELMHSGKSIRTVVK 196

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  135 bits (339), Expect = 3e-39
 Identities = 78/175 (44%), Positives = 103/175 (58%), Gaps = 2/175 (1%)

Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
           A LE++CL+ CG S+G GAA N A ++ GST  +FGLG VGLS   G K  GASRII +D
Sbjct: 1   ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60

Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
            N EK  KAKA G T+ LNP + ++PVQ VI  +T GG DYS +C G    +  A+    
Sbjct: 61  INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
            GWG    +G      E+       + GR++ G+ FGGWK    +P+LV+ Y  K
Sbjct: 121 LGWGSCTVVGAK--VDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 173

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  133 bits (336), Expect = 9e-39
 Identities = 89/175 (50%), Positives = 119/175 (68%)

Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
           APL+K+CLL CG+S G GAA N A +  GS   +FGLG VGL+V  G K  GASRIIGVD
Sbjct: 1   APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60

Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
            N +K  +AK FG TE +NP D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C 
Sbjct: 61  INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
            GWG++V +GV     E+A      ++GRT KG+ FGGWK    +P LV+ Y+ K
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 175

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  131 bits (329), Expect = 2e-37
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 12/203 (5%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF- 67
           + ITCKAAVAW   +PL +E + V PP+  E+RIK++ + +C SD +  +          
Sbjct: 5   KDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVI 64

Query: 68  -GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHEA G+VES+G GVT    G+ V+ +F+ +C +CR CKS  SN CE   +  +  + +
Sbjct: 65  LGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMA 124

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
           D  +RF+ +GKP+Y+    S+F+EYTVV      K+     +  +      L        
Sbjct: 125 DMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTL-------- 176

Query: 187 NVADISKGSTVVIFGLGTVGLSV 209
               I+K   ++  G G   + +
Sbjct: 177 --DQINKAFELLSSGQGVRSIMI 197

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  125 bits (314), Expect = 4e-35
 Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 9/199 (4%)

Query: 7   QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSD--ITAWETQAIFP 64
           Q +VI CKAA+AW  G PL +EE+EV+PP+  E+RI+V+ T +C +D   T  + +A+FP
Sbjct: 3   QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFP 62

Query: 65  RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL----GLER 120
            + GHE +GIVESVGPGVT F  G+ V+  F  +CK C+ C S  +N C  L        
Sbjct: 63  VVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTI 122

Query: 121 RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 180
              +  D+ +RF+ KG+ +YH+  VSSFS+YTVV      +V     L+ +   +    +
Sbjct: 123 DQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFES 182

Query: 181 GLGAAWNVADISKGSTVVI 199
              A   +  + +G ++  
Sbjct: 183 INDA---IDLMKEGKSIRT 198

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  119 bits (300), Expect = 4e-33
 Identities = 69/195 (35%), Positives = 99/195 (50%), Gaps = 5/195 (2%)

Query: 9   QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRI-- 66
           +VI CKAAV W   +P  +EEVEV PP+  E+RIK+V T +CRSD        + P    
Sbjct: 5   KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVI 64

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHEA+GIVES+G GVT    G+ V+ +F  +C  CR CK  + N C    L        
Sbjct: 65  AGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQ 124

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
           D  +RF+ +GKP++H+   S+FS+YTVV      K+ +   L+    L   +        
Sbjct: 125 DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALD---PLITHVLPFEKINE 181

Query: 187 NVADISKGSTVVIFG 201
               +  G ++    
Sbjct: 182 GFDLLRSGESIRTIL 196

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  117 bits (292), Expect = 3e-32
 Identities = 88/175 (50%), Positives = 121/175 (69%), Gaps = 1/175 (0%)

Query: 166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD 225
           APL+ +CLL CG+S G GAA N A +  GST  +FGLG VGL+   G  + GA RII VD
Sbjct: 1   APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60

Query: 226 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
            NP+K EKAK FG T+F+NPND++EP+ QV+ ++T+GG D+S EC+G+ G++  AL+SC 
Sbjct: 61  LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 286 DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK 340
            GWG++V +G      +VA      ++GRT KGS+FGG+K K  +P +V  YL K
Sbjct: 121 KGWGVSVLVGWTD-LHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 174

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  109 bits (272), Expect = 2e-29
 Identities = 57/172 (33%), Positives = 78/172 (45%), Gaps = 4/172 (2%)

Query: 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226
           P+E +  L CG+  G GA  N   ++  S+ V +G G VGLS    AK  GAS II VD 
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 227 NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD 286
              + E AK  G T  +N     +     IK ITDGG +++ E  G   ++         
Sbjct: 62  VESRLELAKQLGATHVINSKT--QDPVAAIKEITDGGVNFALESTGSPEILKQG-VDALG 118

Query: 287 GWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWKPKTDLPSLVNRY 337
             G    +G P+L          L L G+T+ G + G   PK  +P LV  Y
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLY 170

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  103 bits (258), Expect = 4e-27
 Identities = 50/217 (23%), Positives = 83/217 (38%), Gaps = 30/217 (13%)

Query: 12  TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQAIFPRIFGH 69
              AAV    G    ++ +++  PQ +E+ +KVV T +C +D+   +       P + GH
Sbjct: 3   DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGH 62

Query: 70  EASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
           E SGI+E++GP VTE   G+HV+ +  G C  C QC +     C            S+  
Sbjct: 63  EGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGN 121

Query: 130 TRFSIKGK--PVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
                  +     H+ A SSF+ Y +      VKV+   P +++                
Sbjct: 122 HALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQL---------------- 165

Query: 188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV 224
                    V  +    +  +     K      II +
Sbjct: 166 ---------VKFYAFDEINQAAIDSRKGITLKPIIKI 193

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 82.7 bits (203), Expect = 2e-19
 Identities = 33/190 (17%), Positives = 67/190 (35%), Gaps = 18/190 (9%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASG 73
           KA  A+ A QPL   ++    P P +++I++    +C SD+    ++             
Sbjct: 2   KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61

Query: 74  IVESV---GPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQ 129
           IV  V   G  V ++  G+ V +   +  CK C +C+    N C+ +             
Sbjct: 62  IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPT----- 116

Query: 130 TRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV-SSIAPLEKICLLSCGLSAGLGAAWNV 188
                   P      +  +S+  VVH    +++  +   + +   ++      L      
Sbjct: 117 --------PDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVKY 168

Query: 189 ADISKGSTVV 198
             +    T+ 
Sbjct: 169 RFVIDNRTLT 178

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 81.9 bits (201), Expect = 3e-19
 Identities = 47/195 (24%), Positives = 72/195 (36%), Gaps = 32/195 (16%)

Query: 12  TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE----TQAIFPRIF 67
           T KAAV    G PL +EEV+V  P P ++ +K+  + +C +D+ A E     +   P I 
Sbjct: 5   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 64

Query: 68  GHEASGIVESVGPGVTEFNEGEHV-LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
           GHE  G V +VG GVT   EG+ V +      C  C  C +     CE            
Sbjct: 65  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCES----------- 113

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
                     +    Y     ++EY +        +    P      +  G    +    
Sbjct: 114 ----------QQNTGYSVNGGYAEYVLADPNYVGIL----PKNVKATIHPGKLDDINQIL 159

Query: 187 NV--ADISKGSTVVI 199
           +   A   +G  V+ 
Sbjct: 160 DQMRAGQIEGRIVLE 174

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 78.0 bits (191), Expect = 6e-18
 Identities = 51/166 (30%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 226
           PLE   +++  ++ G   A  +ADI  GS+VV+ G+G VGL    GAK RGA RIIGV +
Sbjct: 2   PLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 227 NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD 286
            P   E AK +G T+ LN  + +    QV+K     G D      G +  ++ A++    
Sbjct: 61  RPICVEAAKFYGATDILNYKNGHIE-DQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 287 GWGLAVTLGVPKLKPEV---AAHYGLFLSGRTLKGSLFGGWKPKTD 329
           G G+   +        +      +G  ++ +T+KG L  G + + +
Sbjct: 120 G-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 76.0 bits (186), Expect = 5e-17
 Identities = 35/199 (17%), Positives = 64/199 (32%), Gaps = 28/199 (14%)

Query: 11  ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET---QAIFPRIF 67
           +   A V     QPLV +E E++      I ++++   +C SD+  +     +   P I 
Sbjct: 3   LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62

Query: 68  GHEASGIVESVGPGVTEFNEGE-----HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
           GHE +G V  V     + N         ++      C  C  CK  K             
Sbjct: 63  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYL--------- 113

Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAG 181
                 +  + I      +      +S + V+      +KVS          L       
Sbjct: 114 ---CPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRL--PLKEAN--- 165

Query: 182 LGAAWNVADISKGSTVVIF 200
              A  + +  +   V+++
Sbjct: 166 --KALELMESREALKVILY 182

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 74.6 bits (182), Expect = 1e-16
 Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 35/198 (17%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-----------TQAI 62
           +A      G+PL ++E+ V  P+  ++ IKV    +C SD+   +               
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 63  FPRIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG 122
            P   GHE +G +E VG  V  +++G+ V          C  C+  + + C+        
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR----- 116

Query: 123 VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV-HSGCAVKVSSIAPLEKICLLSCGLSAG 181
                                   +++EY +V H     K+  + P+    +     +  
Sbjct: 117 ----------------WLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANEA 160

Query: 182 LGAAWNVADISKGSTVVI 199
           +    N   I  G  V+I
Sbjct: 161 IDNLENFKAI--GRQVLI 176

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.2 bits (176), Expect = 1e-15
 Identities = 29/185 (15%), Positives = 56/185 (30%), Gaps = 16/185 (8%)

Query: 20  GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE---TQAIFPRIFGHEASGIVE 76
              +     + +  P    +I IK+    +C SDI            P + GHE  G V 
Sbjct: 16  EDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVV 75

Query: 77  SVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKG 136
            +GP      +    + V   +  +C +C              +        +   +   
Sbjct: 76  KLGPKSNSGLKVGQRVGVGA-QVFSCLECDRC-----------KNDNEPYCTKFVTTYSQ 123

Query: 137 KPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGST 196
                Y +   ++ Y  VH    V +     +E + +   G+           D+    T
Sbjct: 124 PYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAF-ERMEKGDVRYRFT 182

Query: 197 VVIFG 201
           +V + 
Sbjct: 183 LVGYD 187

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 69.5 bits (169), Expect = 1e-14
 Identities = 41/216 (18%), Positives = 70/216 (32%), Gaps = 28/216 (12%)

Query: 14  KAAVAWGAGQPLVVEEVEV-------NPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRI 66
           +  V  G+G+ + V++++               + +KVV T++C SD      +      
Sbjct: 3   RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG 61

Query: 67  F--GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
              GHE +G V   G  V     G+ V   F   C  CR CK   +  C  +   R G  
Sbjct: 62  LVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGA 121

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS--GCAVKVSSIAPLEKICLLSCGLSAGL 182
           +          G            +EY +V       +K+       +   ++  +   +
Sbjct: 122 YGYVDMGDWTGG-----------QAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQV 170

Query: 183 GAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA 218
            +  + A    G     F  G     V    K   A
Sbjct: 171 ISLDD-APRGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 67.3 bits (163), Expect = 4e-14
 Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 28/193 (14%)

Query: 15  AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPRIFG 68
           +AV +     L +E+  +  P+ +E+ +++    +C SD+  +E           P + G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 69  HEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
           HEASG V  VG  V    +G+ V       C+ C+ CK  K N C               
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC--------------- 107

Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV 188
                             + + Y V  +    K+     ++++   S  L   +  A+  
Sbjct: 108 -----PDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVD-AFEA 161

Query: 189 ADISKGSTVVIFG 201
           A     +T+ +  
Sbjct: 162 ARKKADNTIKVMI 174

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 66.5 bits (161), Expect = 8e-14
 Identities = 44/195 (22%), Positives = 67/195 (34%), Gaps = 34/195 (17%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF----GH 69
           KAAV     +PL ++EVE       E+ +++    +C +D+ A               GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 70  EASGIVESVGPGVTEFNEGEHVLTVFIGECK-TCRQCKSDKSNTCEVLGLERRGVMHSDQ 128
           E  GIVE VGPGVT    G+ V   ++      C  C S +   CE              
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCE-------------- 107

Query: 129 QTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL--LSCGLSAGLGAAW 186
                   +    Y     ++EY    +   VK+     +E   L  ++      L    
Sbjct: 108 -------HQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEVFDRMLKGQI 160

Query: 187 NVADISKGSTVVIFG 201
           N      G  V+   
Sbjct: 161 N------GRVVLTLE 169

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 62.3 bits (150), Expect = 3e-12
 Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 5/175 (2%)

Query: 162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRI 221
           +S    +E   L   G++A          +  G+ V I G+G +G    Q  K    + +
Sbjct: 1   ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 60

Query: 222 IGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTAL 281
           I +D   EK + A+  G    ++     +PV+QV++     G + + + +G    +    
Sbjct: 61  IALDVKEEKLKLAERLGADHVVDARR--DPVKQVMELTRGRGVNVAMDFVGSQATVDYTP 118

Query: 282 QSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336
                  G  + +G             +  S  + +GSL G +    +L +L  +
Sbjct: 119 YLLGRM-GRLIIVGYGGELRFPTIR--VISSEVSFEGSLVGNYVELHELVTLALQ 170

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 61.9 bits (149), Expect = 4e-12
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 3/172 (1%)

Query: 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227
           L+ + +  C  +    A     +   G TVVI G G +GL     A++ GA  +I +  +
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 228 PEKCEKAKAFGVTEFLNPNDNN--EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC 285
           P + + A+  G    LN  + +  E  + ++      GAD+  E  GD+  +    +   
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 286 DGWGLA-VTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336
            G   +   + VP+       +  L L   T KG             S+ +R
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSR 174

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (146), Expect = 1e-11
 Identities = 36/201 (17%), Positives = 59/201 (29%), Gaps = 31/201 (15%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI------FPRIF 67
            + V  G G  L +E   +  P P E+ +++    +C SD+  WE   I       P + 
Sbjct: 9   LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD 127
           GHEASG VE VG  V     G+ V        +    CK  + N                
Sbjct: 68  GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLS-------------- 113

Query: 128 QQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 187
                              +   +   ++    K+               L   L  A+ 
Sbjct: 114 ------PSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF--PLEKAL-EAFE 164

Query: 188 VADISKGSTVVIFGLGTVGLS 208
                 G  +++        +
Sbjct: 165 TFKKGLGLKIML-KCDPSDQN 184

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 60.0 bits (144), Expect = 2e-11
 Identities = 36/201 (17%), Positives = 60/201 (29%), Gaps = 31/201 (15%)

Query: 14  KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAI---FPRIFGHE 70
           K     G  + L   E E       +  ++ +  S C SDI      A+      I GHE
Sbjct: 2   KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60

Query: 71  ASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQT 130
           A G V  VG  V +F  G+ V+           + ++        +    +     D   
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV- 119

Query: 131 RFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVAD 190
                            F EY  V+        ++A L K   LS  ++       ++  
Sbjct: 120 -----------------FGEYFHVNDADM----NLAILPKDVDLSKLVTHVYHGFDHI-- 156

Query: 191 ISKGSTVVIFGLGTVGLSVAQ 211
                 +++       L  A 
Sbjct: 157 ---EEALLLMKDKPKDLIKAV 174

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 58.9 bits (141), Expect = 3e-11
 Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 30/193 (15%)

Query: 14  KAAVAWGAGQPLVVEEVEV-NPPQPEEIRIKVVCTSLCRSDITAWE------TQAIFPRI 66
           KAA      +PL +E+V+        ++ +++    +C +D+   +       Q   P  
Sbjct: 1   KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60

Query: 67  FGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS 126
            GHE  G +E V  GV    +G+ V+        TC  C++ +   CE            
Sbjct: 61  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCEN----------- 109

Query: 127 DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAW 186
                                F+E+        +K+     +E        ++  L    
Sbjct: 110 ----------LEFPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLE 159

Query: 187 NVADISKGSTVVI 199
              ++  G  V+I
Sbjct: 160 K-GEV-LGRAVLI 170

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 5e-11
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 8/147 (5%)

Query: 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
           LS G+      A     ++ G  V++ G G +G+     AKA GA++++  D +  +  K
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAV 292
           AK  G    L  +  +            G   + + EC G    I   + +     G  +
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATR--SGGTL 124

Query: 293 TLGVPKLKPEVAAHYGLFLSGRTLKGS 319
            L     +          +    +KG 
Sbjct: 125 VLVGLGSEMTTVPLLHAAIREVDIKGV 151

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 58.3 bits (140), Expect = 1e-10
 Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 227
           +  +  LS  L  G   A   A +  GSTV + G G VGL+ A  A+  GA+ +I  D N
Sbjct: 1   IRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59

Query: 228 PEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 272
           P +   AKA G        D   P+ + I  +      D + + +G
Sbjct: 60  PARLAHAKAQGFEIADLSLD--TPLHEQIAALLGEPEVDCAVDAVG 103

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 50.0 bits (118), Expect = 5e-08
 Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 11/150 (7%)

Query: 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
           LS G+      A   A +  G+TV++ G G +GL     AKA GA  +    +   + E 
Sbjct: 12  LSVGV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR-RLEV 65

Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKR---ITDGGADYSFECIGDTGMITTALQSCCDGWGL 290
           AK  G    L  +   E    +I+R         + + +C G+   IT  +       G 
Sbjct: 66  AKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT-GGT 124

Query: 291 AVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 320
            + +G+      V            +K   
Sbjct: 125 LMLVGMGSQMVTVPLVN-ACAREIDIKSVF 153

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 48.4 bits (114), Expect = 1e-07
 Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 13/173 (7%)

Query: 166 APLEKICLLSCGLSAGLGA--AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIG 223
             L  +  L C   AG+             G  V + G+G +G    + A A G + ++ 
Sbjct: 4   EQLAAVAPLLC---AGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMG-AHVVA 59

Query: 224 VDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQS 283
             T+  K E AKA G  E +N  + +E    +         D+    +     +      
Sbjct: 60  FTTSEAKREAAKALGADEVVNSRNADEMAAHL------KSFDFILNTVAAPHNLDDFTTL 113

Query: 284 CCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 336
                G    +G P    +    + L +  R + GS+ GG     ++      
Sbjct: 114 LKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAE 165

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.0 bits (105), Expect = 2e-06
 Identities = 26/161 (16%), Positives = 47/161 (29%), Gaps = 11/161 (6%)

Query: 167 PLEKICLLSCGLSAGLGA--AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV 224
           P      L C    GL             G  V I GLG +G      +K    +    +
Sbjct: 2   PSHLAAPLLC---GGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVI 57

Query: 225 DTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC 284
             +  K E A   G   ++   +  +  ++            S      T +    +   
Sbjct: 58  SRSSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASS----LTDIDFNIMPKA 113

Query: 285 CDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 325
               G  V++ +P+    ++      L   ++  S  G  K
Sbjct: 114 MKVGGRIVSISIPEQHEMLSLKP-YGLKAVSISYSALGSIK 153

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 43.3 bits (101), Expect = 5e-06
 Identities = 10/56 (17%), Positives = 19/56 (33%)

Query: 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGH 69
          KA V    G PL + ++     +  E+ ++V    L  +D        +       
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPF 57

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 43.6 bits (101), Expect = 7e-06
 Identities = 23/209 (11%), Positives = 44/209 (21%), Gaps = 42/209 (20%)

Query: 10  VITCKAAVAWGAGQP---LVVEEVEVNPPQPE--EIRIKVVCTSLCRSDITAWETQAIFP 64
           +IT +A +    G+P   L  +  E++       E+ +K + + +  SDI   +      
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60

Query: 65  RIFGHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM 124
                       +   G     E   V +             S  +              
Sbjct: 61  PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTW--------RT 112

Query: 125 HSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGA 184
           H+       IK        A    +  T                                
Sbjct: 113 HALGNDDDFIKLPNPAQSKANGKPNGLTDAK---------------------------SI 145

Query: 185 AWNVADISKGSTVVIFGLGT--VGLSVAQ 211
                       +   G+     G  +  
Sbjct: 146 ETLYDGTKPLHELYQDGVANSKDGKQLIT 174

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (88), Expect = 3e-04
 Identities = 18/107 (16%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 14  KAAVAWGAGQPLV---VEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIF--- 67
           +A   +  G P V     ++ V  P+  ++ IKV    +   +            +    
Sbjct: 4   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 63

Query: 68  -GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTC 113
            G + +G++E+VG   + F +G+ V T             +      
Sbjct: 64  PGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVY 110

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 37.9 bits (87), Expect = 5e-04
 Identities = 12/94 (12%), Positives = 27/94 (28%), Gaps = 4/94 (4%)

Query: 12  TCKAAVAWGAGQPLVVEEVEVNPPQPE--EIRIKVVCTSLCRSD--ITAWETQAIFPRIF 67
             +A V              ++       ++ ++V  +S+   D   +  + + +    F
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPF 62

Query: 68  GHEASGIVESVGPGVTEFNEGEHVLTVFIGECKT 101
                     V      F EG+ V+        T
Sbjct: 63  VPGIDLAGVVVSSQHPRFREGDEVIATGYEIGVT 96

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 37.7 bits (86), Expect = 8e-04
 Identities = 17/152 (11%), Positives = 32/152 (21%), Gaps = 5/152 (3%)

Query: 174 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 233
                     +   V  +S G  V+I      G                   T     ++
Sbjct: 6   FGVAYLTAWHSLCEVGRLSPGERVLIHSAT--GGVGMAAVSIAKMIGARIYTTAGSDAKR 63

Query: 234 AKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAV 292
                +      +  +      I  +TDG G D     +   G             G  +
Sbjct: 64  EMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLA--GEAIQRGVQILAPGGRFI 121

Query: 293 TLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 324
            LG   +  + +          +         
Sbjct: 122 ELGKKDVYADASLGLAALAKSASFSVVDLDLN 153

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} Length = 293

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.8 bits (87), Expect = 0.001
 Identities = 14/91 (15%), Positives = 26/91 (28%), Gaps = 1/91 (1%)

Query: 180 AGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV 239
           A   +   +       T  + G G VGL   +     GA + + V  +            
Sbjct: 22  ASYMSILGMTPGFGDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVGESDGSIWNPDGIDP 80

Query: 240 TEFLNPNDNNEPVQQVIKRITDGGADYSFEC 270
            E  +    +  +    K     G+    +C
Sbjct: 81  KELEDFKLQHGTILGFPKAKIYEGSILEVDC 111

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

 Score = 36.1 bits (82), Expect = 0.002
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK 235
            V+I G+G +G S A+  +  G   +I G D NPE   KA 
Sbjct: 3   NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV 43

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 35.0 bits (80), Expect = 0.004
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 27 VEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTEFN 86
          ++ VE+ P +  E+ ++ +  S+      A +       + G + + +VES     + F 
Sbjct: 24 LKTVELPPLKNGEVLLEALFLSVDPYMRIASKRLKEGAVMMGQQVARVVES---KNSAFP 80

Query: 87 EGEHVLTVF 95
           G  VL   
Sbjct: 81 AGSIVLAQS 89

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	353
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	100.0
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.98
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.98
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.97
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.96
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.96
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.95
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.95
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.94
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.94
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.94
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.94
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.93
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.92
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.91
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.91
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.83
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.81
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.66
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.64
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.44
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.93
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	97.89
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.86
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.84
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.74
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.73
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.68
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.65
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.63
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.62
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.61
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.59
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.58
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.57
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.54
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.51
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.51
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.51
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.47
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.47
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.44
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.39
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.38
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.38
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.35
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.35
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.32
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.31
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.31
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.29
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.28
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.27
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.24
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.24
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.23
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.22
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.2
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.19
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.18
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.15
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.14
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.12
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.08
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.08
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.07
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.05
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.05
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.05
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.04
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.01
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.98
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.98
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.98
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.97
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.95
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.94
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.94
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.92
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.92
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.91
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.9
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.89
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.88
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.87
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.86
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.85
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.83
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.82
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.81
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	96.79
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.79
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.76
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.76
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.76
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.71
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.69
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.66
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.65
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.64
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.61
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.59
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	96.59
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.5
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.46
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.43
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.41
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.32
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	96.32
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.29
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.25
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.19
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.19
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	96.16
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	95.99
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.93
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.92
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.88
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.86
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.86
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.85
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.81
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.8
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.69
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	95.69
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.6
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	95.46
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.39
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.29
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.17
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.15
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	95.06
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.96
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.8
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.78
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.78
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.75
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	94.74
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.7
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.68
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	94.61
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.57
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.57
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	94.56
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.56
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.38
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.37
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	94.35
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.24
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.17
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.15
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.1
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.05
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.04
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	93.98
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	93.96
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.73
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	93.68
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.66
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.65
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.59
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.56
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	93.55
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.52
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.52
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.51
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	93.49
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.42
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.37
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.35
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.32
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.28
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.23
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.2
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	93.19
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.15
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.1
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.07
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.06
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	92.99
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.9
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	92.82
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	92.8
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	92.71
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.7
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.62
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	92.62
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	92.54
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.48
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.46
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	92.4
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	92.39
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	92.32
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.31
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.29
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.27
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	92.23
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	92.18
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	92.15
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	92.14
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	92.1
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	92.03
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	92.03
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	92.02
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	91.98
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	91.96
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	91.95
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	91.79
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.72
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.57
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.51
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	91.5
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.48
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.44
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	91.38
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.33
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.22
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.21
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.11
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.07
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.0
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.96
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	90.94
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	90.92
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	90.91
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.83
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	90.8
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.76
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	90.73
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	90.7
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	90.62
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	90.58
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.52
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	90.43
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	90.31
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	90.3
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.3
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.29
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.29
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	90.22
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	90.2
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	90.19
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	90.09
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	89.88
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	89.86
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	89.85
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	89.85
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.81
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.74
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	89.71
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	89.62
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	89.54
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	89.33
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	89.29
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	89.07
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	88.99
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	88.95
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	88.8
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.75
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	88.6
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	88.28
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	88.22
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	88.12
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	88.07
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	88.02
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	87.99
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	87.84
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	87.58
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	87.46
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	87.44
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	87.23
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	87.19
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	87.13
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	87.06
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	86.88
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	86.77
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.63
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	86.61
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	86.55
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	86.52
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	86.52
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.38
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	86.22
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.96
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	85.87
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	85.83
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.79
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	85.39
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	85.32
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	85.27
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.17
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	84.93
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	84.7
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	84.7
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	84.6
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.56
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	84.43
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	84.18
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	84.04
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	84.03
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	83.93
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	83.75
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	83.68
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	83.57
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	83.44
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	83.39
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.22
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	83.11
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	83.11
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.09
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	83.05
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	82.97
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.9
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	82.89
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	82.76
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	82.76
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	82.24
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.23
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.17
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	82.17
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	82.03
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	81.73
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	81.73
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	81.66
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	81.26
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	81.04
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	80.85
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	80.7
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	80.58
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.5
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	80.27
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	80.15

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=6e-38  Score=270.97  Aligned_cols=193  Identities=40%  Similarity=0.642  Sum_probs=175.6

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCC
Q 018627            8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +.++++||++++++++++++++++.|+|++|||||||.++|||++|++.+.+..   .+|.++|||++|+|+++|+++++
T Consensus         4 ~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~   83 (199)
T d1cdoa1           4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTE   83 (199)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCce
Confidence            456789999999999999999999999999999999999999999999998865   77899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||++.+...|+.|.+|+.|+++.|.+...........++..+...+|...++....|+||||++++++.++++|+
T Consensus        84 ~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~  163 (199)
T d1cdoa1          84 FQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDP  163 (199)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCT
T ss_pred             ecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECCC
Confidence            99999999999999999999999999999987655433333677777777888888887789999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF  200 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~  200 (353)
                      +++++++|++.+++.|+++++......+.|++|||+
T Consensus       164 ~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         164 SVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999999999999999999777788999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=9.2e-37  Score=262.78  Aligned_cols=192  Identities=38%  Similarity=0.690  Sum_probs=171.5

Q ss_pred             CccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCC
Q 018627            8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +..++|||+++++++++|+++++|.|+|+++||||||+++|||++|++++.|.+   .+|+++|||++|+|+++|++++.
T Consensus         2 ~~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~   81 (197)
T d2fzwa1           2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK   81 (197)
T ss_dssp             CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCcee
Confidence            456799999999999999999999999999999999999999999999999875   78999999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      +++||||++.+...|+.|..|+.|+++.|.+..... .+.. .+...++..+|.+.+++.+.|+||||+++|+..++++|
T Consensus        82 ~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp  160 (197)
T d2fzwa1          82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID  160 (197)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             cCCCCEEEEccccccccccccccCccccCcccccccccccc-CCccceeccCCcceecccccccceeEEEechHHEEECC
Confidence            999999999999999999999999999999864433 3333 56666666778888888878999999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF  200 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~  200 (353)
                      +++++++++.+.+++.|++.++.....-+.+++|||+
T Consensus       161 ~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         161 PLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999999999999999999998555455678899874

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=1.9e-36  Score=262.25  Aligned_cols=191  Identities=39%  Similarity=0.719  Sum_probs=168.2

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCC
Q 018627            7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +..++||||+++.++++|++++++|.|+|+++||||||.++|||++|++.+.|..  .+|.++|||++|+|+++|+++++
T Consensus         3 ~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~~~P~v~GHE~~G~V~~vG~~V~~   82 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALFPVVLGHECAGIVESVGPGVTN   82 (202)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             CCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecccccccccccccceEEeeecCCcee
Confidence            4567899999999999999999999999999999999999999999999999877  67899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccc----cccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRG----VMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g----~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~  160 (353)
                      +++||||++.+...|+.|.+|+.|.++.|.+.......    ....++..++..+|.+.++....|+|+||+++++..++
T Consensus        83 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~  162 (202)
T d1e3ia1          83 FKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA  162 (202)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred             ccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEE
Confidence            99999999999999999999999999999987654321    11244455566677788888888999999999999999


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF  200 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~  200 (353)
                      ++|++++++.++.+.+++.+.+.++..   +++|++|.|+
T Consensus       163 ~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi  199 (202)
T d1e3ia1         163 RVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTI  199 (202)
T ss_dssp             ECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEE
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEE
Confidence            999999999999998888888887632   4689998776

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=4.3e-36  Score=254.98  Aligned_cols=167  Identities=23%  Similarity=0.369  Sum_probs=149.2

Q ss_pred             eEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCCCC
Q 018627           14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFNE   87 (353)
Q Consensus        14 ~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~v   87 (353)
                      .|.+++++++ |+++++|.|+|+++|||||+++++||++|++.+.+..      ++|+++|||++|+|+++|+++++|++
T Consensus         3 maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~   81 (178)
T d1e3ja1           3 LSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK   81 (178)
T ss_dssp             EEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCC
Confidence            3455678887 9999999999999999999999999999998887643      57889999999999999999999999


Q ss_pred             CCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           88 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        88 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      ||||+..+...|+.|..|+.|+++.|.+......  ...                  .|+|+||+++|++.++++|++++
T Consensus        82 GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~--~~~------------------~G~~aey~~v~~~~~~~iP~~~~  141 (178)
T d1e3ja1          82 GDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCAT--PPD------------------DGNLARYYVHAADFCHKLPDNCN  141 (178)
T ss_dssp             TCEEEECCEECCSSSHHHHTTCGGGCTTCEETTB--TTB------------------CCSCBSEEEEEGGGEEECCTTCC
T ss_pred             CCEEEECcccccCCccccccCCccccccccceec--ccc------------------ccccceeeeecccceeeCCCCCC
Confidence            9999999999999999999999999987765321  111                  25999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL  202 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga  202 (353)
                      +++++.+++++.|+|+++ +.+++++|++|||+|+
T Consensus       142 ~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         142 VKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             CGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             HHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence            999999999999999997 6789999999999975

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=5.7e-35  Score=250.77  Aligned_cols=187  Identities=27%  Similarity=0.504  Sum_probs=154.8

Q ss_pred             ceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      .+|+|.++.+.+++|+++++|.|+|++|||||||.+++||++|++.+.|.+  ++|.++|||++|+|+++|+++++|++|
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~~~P~i~GHE~~G~V~~vG~~v~~~~vG   81 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVG   81 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccccCCcccccceEEEeeecCccceeEccC
Confidence            479999999999999999999999999999999999999999999999887  689999999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccc-cccccccCCccccccccCCc--cccccCccceeeeEEEeCCceEECCCC
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGL-ERRGVMHSDQQTRFSIKGKP--VYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~~g~~~~~g~~~~~~~~~~--~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      |||+. ++..|+.|.+|++|+++.|++... .+.|.. .+|+.+....+..  ..+..+.|+|+||.++++..++++|++
T Consensus        82 DrVv~-~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~~  159 (194)
T d1f8fa1          82 DHVVL-SYGYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKD  159 (194)
T ss_dssp             CEEEE-CCCCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECTT
T ss_pred             ceeee-ecccccCChhhhCCCcccccccccceecccc-ccceeeeecCCceeeccccccccccceeEEEehHHEEECCCC
Confidence            99955 456899999999999999997632 234444 5555443332222  233334579999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEE
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV  224 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~  224 (353)
                      ++++++                         +++.|+|++|++++|+++.+|+++|+++
T Consensus       160 i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         160 FPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             CCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            886544                         3456779999999999999999777765

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.7e-35  Score=247.86  Aligned_cols=169  Identities=27%  Similarity=0.389  Sum_probs=150.2

Q ss_pred             ccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCC
Q 018627            9 QVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         9 ~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +|.||||+++.+++++++++++|.|.|++|||||||++++||++|++.+.|.+    .+|.++|||++|+|+++|+++++
T Consensus         2 ~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~   81 (175)
T d1llua1           2 LPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTR   81 (175)
T ss_dssp             CCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccc
Confidence            57799999999999999999999999999999999999999999999998875    58899999999999999999999


Q ss_pred             CCCCCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           85 FNEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        85 ~~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      +++||||+..+. ..|+.|..|+.|+++.|.+....  |.. .                  .|+|+||++++++.++++|
T Consensus        82 ~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~--G~~-~------------------~gg~aey~~v~~~~~~~iP  140 (175)
T d1llua1          82 VKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT--GYS-V------------------NGGYAEYVLADPNYVGILP  140 (175)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB--TTT-B------------------CCSSBSEEEECTTTSEECC
T ss_pred             cccCCEEEeccccccCCccccccCCccccccccccc--ccc-c------------------ccccceEEEechHHEEECC
Confidence            999999987654 47999999999999999887753  222 2                  2589999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF  200 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~  200 (353)
                      ++++++.++++.+++.|+++++ +. ...+|++|||+
T Consensus       141 d~l~~~~a~~~~~~~~t~~~~~-~~-g~~~G~~VLVl  175 (175)
T d1llua1         141 KNVKATIHPGKLDDINQILDQM-RA-GQIEGRIVLEM  175 (175)
T ss_dssp             TTCCCCEEEECGGGHHHHHHHH-HT-TCCSSEEEEEC
T ss_pred             CCCChhHHHHHHhHHHHHHHHH-Hh-CCCCCCEEEeC
Confidence            9999998888888999999886 43 34479999984

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=6.5e-35  Score=245.82  Aligned_cols=163  Identities=21%  Similarity=0.333  Sum_probs=148.4

Q ss_pred             eEEEEecCCCCeEEEEeecCCC-CCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCCC
Q 018627           14 KAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        14 ~a~~~~~~~~~l~~~~~~~p~~-~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      ||+++.++++||++++++.|++ +++||||||.+++||++|++.+.|..      .+|+++|||++|+|+++|+++++++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            6999999999999999999986 68999999999999999999888765      5789999999999999999999999


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||||++.+...|++|..|+.|++++|.+......  . .+                  |+|+||+.++++.++++|+++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~--~-~~------------------G~~aey~~v~~~~~~~iP~~~  139 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL--N-ID------------------GGFAEFMRTSHRSVIKLPKDV  139 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT--T-BC------------------CSSBSEEEECGGGEEECCTTC
T ss_pred             CCCEEEEcCccCCCCccccccccccccccccccee--e-cc------------------cccceeeeehhhcceecCCCC
Confidence            99999999999999999999999999988765322  2 22                  599999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEE
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVI  199 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV  199 (353)
                      ++++++++.+++.|+|+++ +..++ .|++|||
T Consensus       140 ~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         140 RVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             CCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             CHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            9998888888999999998 55777 8999998

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=100.00  E-value=1.1e-34  Score=249.89  Aligned_cols=191  Identities=37%  Similarity=0.678  Sum_probs=160.5

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCC
Q 018627            7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +....||||+++++++++|+++++|.|+|+++||||||.++|||++|++++.|..  .+|.++|||++|+|+++|+++.+
T Consensus         3 ~~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~~~P~i~GHE~~G~Vv~~G~~v~~   82 (198)
T d1p0fa1           3 AGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILGHEAVGVVESIGAGVTC   82 (198)
T ss_dssp             TTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             CCCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccccccccccceeeeeeeeecCccccc
Confidence            3345699999999999999999999999999999999999999999999998876  88999999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      +++||||++.+...|+.|.+|+.|+++.|+.......+-...++..++...|...+.....|+|+||+++++..++++|+
T Consensus        83 ~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~  162 (198)
T d1p0fa1          83 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP  162 (198)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred             CcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCC
Confidence            99999999999999999999999999999987654432222455555556677777777778999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHH
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGL  207 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~  207 (353)
                      +++++.++...+.+.+          +.++++|||.|+|++|+
T Consensus       163 ~~~~~~~~~~~~~~~~----------v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         163 KINVNFLVSTKLTLDQ----------INKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TSCGGGGEEEEECGGG----------HHHHHHHTTTSSCSEEE
T ss_pred             CCCHHHHHHhhcchhh----------cCCCCEEEEECCCcceE
Confidence            9998776555433322          23445578888887765

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=7.4e-34  Score=245.07  Aligned_cols=190  Identities=38%  Similarity=0.657  Sum_probs=161.5

Q ss_pred             CCccceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCCC
Q 018627            7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus         7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      +..+++|||+++++++++|+++++|.|+|+++||||||.++|||++|++.+.|.+  ++|.++|||++|+|+++|+++++
T Consensus         3 ~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~~~P~i~GHE~~G~Vv~vG~~v~~   82 (198)
T d2jhfa1           3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVTT   82 (198)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCSSBCCCCSEEEEEEEECTTCCS
T ss_pred             CCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcccccceecccceeEEEEecCccccC
Confidence            4567899999999999999999999999999999999999999999999999887  78899999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeCCceEECC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS  163 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP  163 (353)
                      +++||||++.+...|+.|.+|+.++.+.|....... .+.. .++...+..+|.+.++....|+|+||+++|+..++++|
T Consensus        83 ~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~p  161 (198)
T d2jhfa1          83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID  161 (198)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred             cCCCCEEEEeeeecccccccccCCccceeccccccccCccc-cCccccccccCceeccCCCCCcccCeEEeCHHHeEECC
Confidence            999999999999999999999999999999886644 2333 45555566677777777777999999999999999999


Q ss_pred             CCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE
Q 018627          164 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF  200 (353)
Q Consensus       164 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~  200 (353)
                      +.++++.++....++.....+   ...+++|++|+|+
T Consensus       162 ~~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi  195 (198)
T d2jhfa1         162 AAFALDPLITHVLPFEKINEG---FDLLRSGESIRTI  195 (198)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred             CCCCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence            999887766554444433322   1236789998876

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.2e-34  Score=243.63  Aligned_cols=178  Identities=20%  Similarity=0.281  Sum_probs=152.4

Q ss_pred             CccceeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCC
Q 018627            8 PQVITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGV   82 (353)
Q Consensus         8 ~~~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~   82 (353)
                      ++|.+|||+++..++..  +++.+++.++++++||||||.++|||++|++.+.|.+   .+|+++|||++|+|+++|+++
T Consensus         2 ~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v   81 (192)
T d1piwa1           2 SYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKS   81 (192)
T ss_dssp             CTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTC
T ss_pred             CCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhccccc
Confidence            56789999999888754  7888888788899999999999999999999998775   788999999999999999987


Q ss_pred             -CCCCCCCeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceE
Q 018627           83 -TEFNEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV  160 (353)
Q Consensus        83 -~~~~vGd~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~  160 (353)
                       +.+++||||...+. ..|+.|.+|+.|+++.|.+......+.. .+|             ....|+||||+++|++.++
T Consensus        82 ~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~-~~G-------------~~~~Ggfaey~~v~~~~~~  147 (192)
T d1piwa1          82 NSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPY-EDG-------------YVSQGGYANYVRVHEHFVV  147 (192)
T ss_dssp             CSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBC-TTS-------------CBCCCSSBSEEEEEGGGEE
T ss_pred             ccccCCCCeeeEeeeccCCCCchhhhcCCccccccccccccccc-ccc-------------cccccceeeEEEeehHHeE
Confidence             66999999987665 4799999999999999999876544333 222             2234699999999999999


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF  200 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~  200 (353)
                      ++|+++++++|+.+.+.+.|||+++ +.++++.|++|||.
T Consensus       148 ~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         148 PIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             ECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            9999999998877776688999998 67899999999875

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-34  Score=242.80  Aligned_cols=168  Identities=21%  Similarity=0.297  Sum_probs=147.2

Q ss_pred             eeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC------CCCcccccceeEEEEEeCCCCCCC
Q 018627           12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA------IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~------~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      .|.|++++++++ |+++++|.|+|+++||||||.+++||++|++.+.+..      .+|.++|||++|+|+++|+++++|
T Consensus         7 ~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           7 NNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            577999999987 9999999999999999999999999999999887532      678999999999999999999999


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||||++.+...|+.|.+|+.|+++.|.+......  ...                  .|+|+||++++.++++++|++
T Consensus        86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~--~~~------------------~G~~aey~~~~~~~~~~lP~~  145 (185)
T d1pl8a1          86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCAT--PPD------------------DGNLCRFYKHNAAFCYKLPDN  145 (185)
T ss_dssp             CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTB--TTB------------------CCSCBSEEEEEGGGEEECCTT
T ss_pred             cccccceecceeccccchhhccchhchhccceeeec--ccc------------------cccceEEEEEchHHEEECCCC
Confidence            999999999999999999999999999988765321  111                  258999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCCh
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGT  204 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~  204 (353)
                      +++++++.+  ++++|++++ +..+++.|++||| |+|+
T Consensus       146 ~~~~~aa~~--pl~~a~~a~-~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         146 VKPLVTHRF--PLEKALEAF-ETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             CGGGEEEEE--EGGGHHHHH-HHHHTTCCSEEEE-ECCT
T ss_pred             CCHHHHHHH--HHHHHHHHH-HHhCCCCCCEEEE-EeCC
Confidence            999988765  466788876 6678999999998 5543

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.1e-33  Score=240.19  Aligned_cols=171  Identities=21%  Similarity=0.279  Sum_probs=142.9

Q ss_pred             cceeeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCC---
Q 018627           10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVT---   83 (353)
Q Consensus        10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~---   83 (353)
                      .++|||+++.+++++++++++|.|+|++|||||||.++|||++|+++++|.+   ++|+++|||++|+|+++|++++   
T Consensus         2 ~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~   81 (184)
T d1vj0a1           2 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN   81 (184)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred             CceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccc
Confidence            4689999999999999999999999999999999999999999999999876   6899999999999999999885   


Q ss_pred             --CCCCCCeEEeecccCCCCCcccccCCCCC-cccccccccccccCCccccccccCCccccccCccceeeeEEEe-CCce
Q 018627           84 --EFNEGEHVLTVFIGECKTCRQCKSDKSNT-CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVH-SGCA  159 (353)
Q Consensus        84 --~~~vGd~V~~~~~~~c~~c~~c~~g~~~~-c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~-~~~v  159 (353)
                        .+++||||+..+..+|++|.+|+.|.++. |++....  |.. ..          .......+|+|+||++++ +.++
T Consensus        82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~--G~~-~~----------~~~~~~~~Gg~ae~~~v~~~~~v  148 (184)
T d1vj0a1          82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY--GIN-RG----------CSEYPHLRGCYSSHIVLDPETDV  148 (184)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET--TTT-CC----------SSSTTCCCSSSBSEEEECTTCCE
T ss_pred             cccccceeeeEeccccccccChhHhCccccccCCCceee--ccC-CC----------CCCCCCcceeCcCcEEechhHcE
Confidence              46899999999999999999999998654 7765532  221 00          000011246999999996 5799


Q ss_pred             EECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE
Q 018627          160 VKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF  200 (353)
Q Consensus       160 ~~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~  200 (353)
                      +++|+++++++      ++++|++++ +++++++|++|||+
T Consensus       149 ~~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         149 LKVSEKITHRL------PLKEANKAL-ELMESREALKVILY  182 (184)
T ss_dssp             EEECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred             EECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence            99999998653      456788886 67899999999997

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=100.00  E-value=7.1e-33  Score=234.76  Aligned_cols=164  Identities=23%  Similarity=0.390  Sum_probs=140.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-----------CCCcccccceeEEEEEeCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-----------IFPRIFGHEASGIVESVGPG   81 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-----------~~p~~~G~e~~G~V~~vG~~   81 (353)
                      |||+++++++++|+++++|.|+|+++||||||.++|||++|++.++|.+           ++|+++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            8999999999999999999999999999999999999999999998753           57899999999999999999


Q ss_pred             CCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCC-ceE
Q 018627           82 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAV  160 (353)
Q Consensus        82 ~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-~v~  160 (353)
                      +.+|++||||++.+...|+.|..|+.|+++.|.+....  |.. .+                  |+||||++++.. .++
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~--g~~-~~------------------G~~aey~~vp~~~~~~  139 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL--GIN-FD------------------GAYAEYVIVPHYKYMY  139 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB--TTT-BC------------------CSSBSEEEESCGGGEE
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCccee--eec-cc------------------cccccEEEEEhHHeEE
Confidence            99999999999999999999999999999999987653  322 22                  599999999765 466


Q ss_pred             ECCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEE
Q 018627          161 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVI  199 (353)
Q Consensus       161 ~iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV  199 (353)
                      ++|+..+.+.|+.+..++.++++++ +.+++ .|++|||
T Consensus       140 ~~~~~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         140 KLRRVKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             ECSSSCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             ECCCCChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            6666555444444456888999987 55666 5899987

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.98  E-value=8.1e-35  Score=250.95  Aligned_cols=189  Identities=21%  Similarity=0.241  Sum_probs=154.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCC-------CCCeEEEEEeeeecchhhhhhhccCC--CCCcccccceeEEEEEeCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPP-------QPEEIRIKVVCTSLCRSDITAWETQA--IFPRIFGHEASGIVESVGPGVT   83 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~-------~~~eVlVrv~~~~i~~~D~~~~~g~~--~~p~~~G~e~~G~V~~vG~~~~   83 (353)
                      +||+++.++++ ++++++|.|++       +++||||||.+++||++|++.++|..  .+|+++|||++|+|+++|++++
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~~~~P~v~GHE~~G~Vv~vG~~V~   80 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGLVLGHEITGEVIEKGRDVE   80 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSCCCTTCBCCCCEEEEEEEECTTCC
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcccccceeccceeeeeeeccccccc
Confidence            68999999998 99999999875       46999999999999999999998877  7899999999999999999999


Q ss_pred             CCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeC--CceEE
Q 018627           84 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS--GCAVK  161 (353)
Q Consensus        84 ~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~--~~v~~  161 (353)
                      +|++||||++.+..+|++|.+|+.|+++.|........+-.....      .+     ....|+|+||+++|.  ..+++
T Consensus        81 ~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~------~~-----~~~~Gg~aeyv~vp~~~~~l~~  149 (201)
T d1kola1          81 NLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV------DM-----GDWTGGQAEYVLVPYADFNLLK  149 (201)
T ss_dssp             SCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT------TS-----CCBCCCSBSEEEESSHHHHCEE
T ss_pred             cccccceeEEeeeeeccCChhhhCCCccccccccccccccccccc------CC-----CccccccccEEEeehHHCeEEE
Confidence            999999999999999999999999999998776433222110000      00     011369999999985  37999


Q ss_pred             CCCCCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC
Q 018627          162 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA  218 (353)
Q Consensus       162 iP~~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~  218 (353)
                      ||++.++.+++++.+.+.++++++ +....+.+    ++|+|++|++++|+||++|+
T Consensus       150 iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         150 LPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             CSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence            999877777777777888888886 43444444    24889999999999999885

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.98  E-value=2.1e-32  Score=230.60  Aligned_cols=165  Identities=27%  Similarity=0.414  Sum_probs=141.5

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |||+++++++++|+++++|.|+|++|||||||++++||++|++.+.+..    .+|.++|||++|+|+++|+.++++++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            8999999999999999999999999999999999999999999877543    788999999999999999999999999


Q ss_pred             CeEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCC
Q 018627           89 EHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP  167 (353)
Q Consensus        89 d~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~  167 (353)
                      |||+..+. ..|+.|..|+.+..+.|.+.......   .                  .|+||||+++++++++++|++++
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~------------------~G~~aey~~v~~~~~~~iP~~~~  139 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYS---V------------------DGGYAEYCRAAADYVVKIPDNTI  139 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTT---B------------------CCSSBSEEEEEGGGCEECCTTCC
T ss_pred             eEEeeccccccccccccccCCCcccccccccccee---c------------------cCccccceEecHHHEEECCCCCC
Confidence            99987655 46899999999999999887753322   2                  25999999999999999999999


Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL  202 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga  202 (353)
                      ++.|+ +. .+.++++++. ...+ +|++|||+|.
T Consensus       140 ~e~A~-l~-~~~~~~~~~~-~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         140 IEVQP-LE-KINEVFDRML-KGQI-NGRVVLTLED  170 (171)
T ss_dssp             EEEEE-GG-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred             HHHHH-HH-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence            86654 44 4567777663 3455 5999999873

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.97  E-value=3.8e-34  Score=241.83  Aligned_cols=167  Identities=20%  Similarity=0.161  Sum_probs=136.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||+++.++++ ++++++|.|+|+++|||||++++|||++|++.+.+..   .+|+++|||++|+|+++|+++++|++||
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            89999999998 9999999999999999999999999999998775443   7799999999999999999999999999


Q ss_pred             eEEeecccCCCCCcccccCCCCCcccccccc-cccccCCccccccccCCccccccCccceeeeEEEeC--CceEECCCCC
Q 018627           90 HVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS--GCAVKVSSIA  166 (353)
Q Consensus        90 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~--~~v~~iP~~l  166 (353)
                      ||+..+...|++|.+|+.|+++.|....... .|.. .                  .|+|+||+++|.  ..++++|+++
T Consensus        80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~-~------------------~G~~aEy~~vp~a~~~l~~iP~~~  140 (177)
T d1jqba1          80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF-K------------------DGVFGEYFHVNDADMNLAILPKDV  140 (177)
T ss_dssp             EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTT-B------------------CCSSBSSEEESSHHHHCEECCTTS
T ss_pred             cEEEeeeeccccccchhhhhhcccccccccccccCC-C------------------ChhcCeeEEEEhhhCeEEECCCCc
Confidence            9999999999999999999999998774311 1111 2                  259999999986  3699999999


Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHH
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVA  210 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~  210 (353)
                      ++++++...   .+++.++        ++.+|+.|+|++|+.++
T Consensus       141 ~~~~~~~~~---~~~~~~~--------~~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         141 DLSKLVTHV---YHGFDHI--------EEALLLMKDKPKDLIKA  173 (177)
T ss_dssp             CGGGGEEEE---EESGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred             chHHHHHHH---HHHHHHh--------cCceEEECCCHHHhhee
Confidence            988775433   2333332        23467777777776543

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=5.3e-32  Score=229.09  Aligned_cols=158  Identities=23%  Similarity=0.404  Sum_probs=131.9

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEGE   89 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vGd   89 (353)
                      |||++.+++++||+++++|.|+|++|||||||.++|||++|++.+.|..   .+|+++|||++|+|+++|++++++++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            8999999999999999999999999999999999999999999998865   7899999999999999999999999999


Q ss_pred             eEEeecc-cCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627           90 HVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL  168 (353)
Q Consensus        90 ~V~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~  168 (353)
                      ||...+. ..|++|.+|+.|++++|++....+.+.. .+.            +....|+|+||+++|++.++++|+....
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~-~~~------------~~~~~GgfaEy~~v~~~~~~~ip~~~~~  147 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPT-PDE------------PGHTLGGYSQQIVVHERYVLRIRVADIE  147 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBC-SST------------TSBCCCSSBSEEEEEGGGCEECCCCCEE
T ss_pred             EEEEcccccccCccccccCcccccCCCccccccccC-CCC------------CcccccccceEEEechHHEEECCCCCcC
Confidence            9977665 4899999999999999999765444433 111            1112469999999999999999965432


Q ss_pred             hhhhhhchhhhHHHHHHH
Q 018627          169 EKICLLSCGLSAGLGAAW  186 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~  186 (353)
                      .  +.. .++.++++++.
T Consensus       148 ~--~~a-~~l~~a~~a~~  162 (179)
T d1uufa1         148 M--IRA-DQINEAYERML  162 (179)
T ss_dssp             E--ECG-GGHHHHHHHHH
T ss_pred             h--hHh-chhHHHHHHHH
Confidence            2  222 25667888763

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.96  E-value=1.2e-28  Score=207.86  Aligned_cols=173  Identities=46%  Similarity=0.763  Sum_probs=152.5

Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      |.|||++.|++.|+|+++++.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|+++++|+++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            56799999999999999988899999999999999999999999999999989999999999999999999999999875


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCCC
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK  327 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  327 (353)
                      .+....+..+..+++++|++||++|.+..+..++..+.+++|+++.+|.......+++++..++++++|+|++++++. .
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~-~  160 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-G  160 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC-G
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCC-H
Confidence            344455555565666999999999998888999988876338999999987778888887777789999999988764 4


Q ss_pred             CcHHHHHHHHHcCC
Q 018627          328 TDLPSLVNRYLKKV  341 (353)
Q Consensus       328 ~~~~~~~~~l~~g~  341 (353)
                      +|++++++|+++||
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            58999999999987

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.96  E-value=5.5e-29  Score=209.99  Aligned_cols=173  Identities=32%  Similarity=0.514  Sum_probs=156.1

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++++.|+.++|++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            35678999999999999999898999999999999999999999999999999888899999999999999999999998


Q ss_pred             CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecCCC
Q 018627          246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGW  324 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~  324 (353)
                      +  ++++.+.+++++++++|+||||+|.+..++.+++.++++ |+++.+|........+++...+ +++++++|++++.+
T Consensus        81 ~--~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  157 (174)
T d1f8fa2          81 K--TQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSG  157 (174)
T ss_dssp             T--TSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGS
T ss_pred             C--CcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCC
Confidence            7  678999999999889999999999988999999999997 9999999866545555665554 56999999998888


Q ss_pred             CCCCcHHHHHHHHHcCC
Q 018627          325 KPKTDLPSLVNRYLKKV  341 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~  341 (353)
                      ..+++++++++|+++||
T Consensus       158 ~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         158 SPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHcCC
Confidence            77789999999999997

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.1e-29  Score=204.38  Aligned_cols=142  Identities=17%  Similarity=0.262  Sum_probs=128.6

Q ss_pred             eeeEEEEecCCCC--eEEE-EeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCC
Q 018627           12 TCKAAVAWGAGQP--LVVE-EVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        12 ~~~a~~~~~~~~~--l~~~-~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      .|||+++++.+.+  ++++ ++|.|+|++|||||||.+++||++|.+.+.|.+    .+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            5999999988776  8875 689999999999999999999999999988766    56789999999999999999999


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||||++...                             .                  .|+|+||++++++.++++|+
T Consensus        82 ~~vGdrV~~~~~-----------------------------~------------------~G~~ae~~~v~~~~~~~iP~  114 (150)
T d1yb5a1          82 FKKGDRVFTSST-----------------------------I------------------SGGYAEYALAADHTVYKLPE  114 (150)
T ss_dssp             CCTTCEEEESCC-----------------------------S------------------SCSSBSEEEEEGGGEEECCT
T ss_pred             cccCcccccccc-----------------------------c------------------cccccccccccccccccccC
Confidence            999999987632                             1                  25999999999999999999


Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF  200 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~  200 (353)
                      ++++++||++++...|+++++........|+++||+
T Consensus       115 ~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         115 KLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            999999999999999999998888889999999984

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.96  E-value=1.9e-28  Score=206.33  Aligned_cols=173  Identities=44%  Similarity=0.801  Sum_probs=151.4

Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++||.+.|++.|+|+++.+.+++++|++|||+|+|++|++++|+++++|+++|++++.+++|++.++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            46899999999999999998889999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP  326 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  326 (353)
                      ..+.......+...++++|++|||+|.+..++.+++++++++|+++.+|.....  .++++..++.+++++|++.+++.+
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~--~~i~~~~~~~~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE--MTIPTVDVILGRSINGTFFGGWKS  159 (174)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSE--EEEEHHHHHTTCEEEECSGGGCCH
T ss_pred             cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCc--cccchHHHhccCEEEEEEeeCCCh
Confidence            434455555555556699999999999999999999999833999999987653  444555556788999999999888


Q ss_pred             CCcHHHHHHHHHcCC
Q 018627          327 KTDLPSLVNRYLKKV  341 (353)
Q Consensus       327 ~~~~~~~~~~l~~g~  341 (353)
                      +++++++++++++||
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            899999999999997

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=9.5e-28  Score=202.57  Aligned_cols=174  Identities=48%  Similarity=0.845  Sum_probs=151.1

Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++||.++|++.|+|+++.+.+++++|++|||+|+|++|++++|+++++|+++|++++++++|++.++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            57899999999999999998889999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC-CCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL-KPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                      +...+..+.++..+++++|++||++|.+..++.++.+++++ |+++.++.... .......+..++++++++|+.++++.
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            54566667777777779999999999988889999999996 88887765443 23333445556789999999999888


Q ss_pred             CCCcHHHHHHHHHcCC
Q 018627          326 PKTDLPSLVNRYLKKV  341 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~  341 (353)
                      ++++++++++++++||
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            7889999999999997

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.95  E-value=5.2e-27  Score=198.11  Aligned_cols=175  Identities=49%  Similarity=0.883  Sum_probs=149.2

Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++||.++|++.|+|+++.+.+++++|++|||+|+|++|++++++++..|+.+|++++++++|++.++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            57899999999999999998999999999999999999999999999999988999999999999999999999999876


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCCC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP  326 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  326 (353)
                      +.+....+.++...++++|++||++|.+..++.++..+++++|.++..+...........+..+++++++.|++++++.+
T Consensus        82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  161 (176)
T d2jhfa2          82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKS  161 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred             CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCCH
Confidence            54445555555555669999999999988889999999986244555555444445555556567899999999988887


Q ss_pred             CCcHHHHHHHHHcCC
Q 018627          327 KTDLPSLVNRYLKKV  341 (353)
Q Consensus       327 ~~~~~~~~~~l~~g~  341 (353)
                      +++++++++++++||
T Consensus       162 ~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         162 KDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            889999999999997

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.95  E-value=2.9e-27  Score=199.54  Aligned_cols=172  Identities=44%  Similarity=0.754  Sum_probs=151.1

Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++|+.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+++.+|+++|++++.+++|++.++++|+++++|++
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            58999999999999999998889999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                      +. ....+.+.+.+.+ ++|+++|++|.+..+..++..+.+++|+++.+|.......+.+.+..++++++++|+++++..
T Consensus        83 ~~-~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  161 (176)
T d1d1ta2          83 DS-TKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK  161 (176)
T ss_dssp             GC-SSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             cc-chHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCCC
Confidence            42 3334555555555 999999999998888888887766449999999988777777777777889999999999888


Q ss_pred             CCCcHHHHHHHHHc
Q 018627          326 PKTDLPSLVNRYLK  339 (353)
Q Consensus       326 ~~~~~~~~~~~l~~  339 (353)
                      +++|++++++++.+
T Consensus       162 ~~~dip~li~~~~~  175 (176)
T d1d1ta2         162 SRDDVPKLVTEFLA  175 (176)
T ss_dssp             HHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhC
Confidence            88999999999865

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=1.6e-27  Score=200.71  Aligned_cols=170  Identities=30%  Similarity=0.454  Sum_probs=149.4

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +|+++|+.++++++|+|+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            57899999999999999997 66899999999999999999999999999999889999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh---hhcCcEEEeeec
Q 018627          246 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL---FLSGRTLKGSLF  321 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~---~~~~~~i~g~~~  321 (353)
                      +  ++++.+.+++.+++ ++|++|||+|++..++.++++++++ |+++.+|.......+++....   +++++++.++..
T Consensus        80 ~--~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          80 K--NGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             G--GSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             c--chhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            7  57788999999988 9999999999988899999999997 999999987776666554433   346889988876


Q ss_pred             CCCCCCCcHHHHHHHHHcCC
Q 018627          322 GGWKPKTDLPSLVNRYLKKV  341 (353)
Q Consensus       322 ~~~~~~~~~~~~~~~l~~g~  341 (353)
                      +.+  +..++++++++++||
T Consensus       157 ~~~--r~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGG--RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCH--HHHHHHHHHHHHTTS
T ss_pred             CCC--cccHHHHHHHHHcCC
Confidence            553  355778889999886

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-26  Score=193.56  Aligned_cols=168  Identities=23%  Similarity=0.327  Sum_probs=142.5

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +|+++||.+. ++++||+++ +++++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|+++++++
T Consensus         1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            4789998775 899999997 66899999999999999999999999999999889999999999999999999999887


Q ss_pred             CCCCccHHHHHH---HHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecC
Q 018627          246 NDNNEPVQQVIK---RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG  322 (353)
Q Consensus       246 ~~~~~~~~~~~~---~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  322 (353)
                      .+  .+..+..+   ...+.++|++|||+|++..++.++++++++ |+++++|.+....++++... ++++++++|++.+
T Consensus        79 ~~--~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~~~~~~~~~~-~~k~l~i~Gs~~~  154 (171)
T d1pl8a2          79 SK--ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTTVPLLHA-AIREVDIKGVFRY  154 (171)
T ss_dssp             SS--CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSCCCCCHHHH-HHTTCEEEECCSC
T ss_pred             cc--cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCCCCccCHHHH-HHCCcEEEEEeCC
Confidence            63  34433333   333449999999999988999999999997 99999999876555554433 4679999998633


Q ss_pred             CCCCCCcHHHHHHHHHcCCCC
Q 018627          323 GWKPKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g~i~  343 (353)
                          .++|+++++++++|+|+
T Consensus       155 ----~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         155 ----CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             ----SSCHHHHHHHHHTTSCC
T ss_pred             ----HhHHHHHHHHHHcCCCC
Confidence                36899999999999985

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=7.8e-28  Score=192.69  Aligned_cols=127  Identities=21%  Similarity=0.203  Sum_probs=115.6

Q ss_pred             eeEEEEecCCCCeEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        13 ~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      |||+++.++++++++++++.|+|+++|||||+++++||++|++.+.|.+    .+|+++|||++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            8999999999999999999999999999999999999999999988875    68999999999999           39


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL  168 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~  168 (353)
                      |||+++..                                                .|+|+||+.++++.++++|+++++
T Consensus        70 d~V~~~~~------------------------------------------------~G~~aey~~v~~~~~~~~P~~~~~  101 (131)
T d1iz0a1          70 RRYAALVP------------------------------------------------QGGLAERVAVPKGALLPLPEGRPV  101 (131)
T ss_dssp             EEEEEECS------------------------------------------------SCCSBSEEEEEGGGCEECCTTCCC
T ss_pred             ceEEEEec------------------------------------------------cCccceeeeeCHHHeEEccCCCCH
Confidence            99988731                                                259999999999999999999999


Q ss_pred             hhhhhhchhhhHHHHHHHHhccCCCCCEEEEE
Q 018627          169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIF  200 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~  200 (353)
                      ++||.+++.+.|||++|++.+  +.|++||++
T Consensus       102 ~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         102 VGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             EEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence            999999999999999997655  459999863

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.3e-27  Score=198.99  Aligned_cols=166  Identities=18%  Similarity=0.204  Sum_probs=145.4

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ||++|||++++++.|||++|.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5899999999999999999988899999999999997 9999999999999999 8999989999999999999999999


Q ss_pred             CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhh-hcCcEEEeeecC
Q 018627          245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG  322 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~  322 (353)
                      ++  +.++.+.+++.+++ ++|++|||+|+ ..++.++++++++ |+++.+|.... .  ++++..+ .++++++|+++.
T Consensus        80 ~~--~~~~~~~i~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~--~~~~~~~~~k~~~i~g~~~~  152 (174)
T d1yb5a2          80 HR--EVNYIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRGT-I--EINPRDTMAKESSIIGVTLF  152 (174)
T ss_dssp             TT--STTHHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCSC-E--EECTHHHHTTTCEEEECCGG
T ss_pred             cc--cccHHHHhhhhhccCCceEEeecccH-HHHHHHHhccCCC-CEEEEEecCCC-C--CCCHHHHHHCCCEEEEEEec
Confidence            87  67899999999887 99999999996 6889999999997 99999997543 3  4444433 569999999866


Q ss_pred             CCCCCCcHHHHHHHHHcC
Q 018627          323 GWKPKTDLPSLVNRYLKK  340 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g  340 (353)
                      ... +++++++++++++|
T Consensus       153 ~~~-~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         153 SST-KEEFQQYAAALQAG  169 (174)
T ss_dssp             GCC-HHHHHHHHHHHHHH
T ss_pred             CCC-HHHHHHHHHHHHHH
Confidence            543 56799999998876

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.94  E-value=7.5e-27  Score=191.27  Aligned_cols=138  Identities=20%  Similarity=0.241  Sum_probs=119.4

Q ss_pred             eEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC---CCCcccccceeEEEEEeCCCCCCCCCC
Q 018627           14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA---IFPRIFGHEASGIVESVGPGVTEFNEG   88 (353)
Q Consensus        14 ~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~---~~p~~~G~e~~G~V~~vG~~~~~~~vG   88 (353)
                      +.+++.+.|.|  |+++++|.|+|+++||||||++++||++|++.+.|.+   .+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            46788888877  9999999999999999999999999999999998886   678899999999999999999999999


Q ss_pred             CeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCCCh
Q 018627           89 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL  168 (353)
Q Consensus        89 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l~~  168 (353)
                      |||+....                                               ..|+|+||++++.+.++++|+++++
T Consensus        82 drV~~~~~-----------------------------------------------~~G~~ae~~~v~~~~~~~~P~~~~~  114 (147)
T d1qora1          82 DRVVYAQS-----------------------------------------------ALGAYSSVHNIIADKAAILPAAIKV  114 (147)
T ss_dssp             CEEEESCC-----------------------------------------------SSCCSBSEEEEEGGGEEECCTTSCC
T ss_pred             ceeeeecc-----------------------------------------------ccccceeEEEEehHHeEEcCcccch
Confidence            99975311                                               1259999999999999999999988


Q ss_pred             hhh--hhhchhhhHHHHHHHHhccCCCCCEEEE
Q 018627          169 EKI--CLLSCGLSAGLGAAWNVADISKGSTVVI  199 (353)
Q Consensus       169 ~~a--a~l~~~~~ta~~al~~~~~~~~g~~vLV  199 (353)
                      +++  +.++....++++++++ .++++|++|||
T Consensus       115 ~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         115 DVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             CCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            755  4455666777777755 67899999997

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=3.4e-27  Score=200.40  Aligned_cols=174  Identities=18%  Similarity=0.201  Sum_probs=150.1

Q ss_pred             hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      +|||++++++.|||+++++.+++++|++|||+|+ |++|++++|+|+.+|+ +++++.+++++.+.++++|++++++++ 
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~-   78 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSR-   78 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETT-
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCC-
Confidence            5899999999999999999899999999999987 9999999999999999 888888999999999999999999987 


Q ss_pred             CCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC-
Q 018627          248 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK-  325 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-  325 (353)
                       +.++.+.+++.+++ ++|++|||+|+ +.++.++++++++ |+++.+|..............+.+++++.++....+. 
T Consensus        79 -~~~~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (183)
T d1pqwa_          79 -SVDFADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK  155 (183)
T ss_dssp             -CSTHHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred             -ccCHHHHHHHHhCCCCEEEEEecccc-hHHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence             67899999999887 99999999997 6789999999997 9999999765544444445545678888877544321 


Q ss_pred             -----CCCcHHHHHHHHHcCCCCCCCC
Q 018627          326 -----PKTDLPSLVNRYLKKVRNTRKP  347 (353)
Q Consensus       326 -----~~~~~~~~~~~l~~g~i~~~~l  347 (353)
                           .++.++++++++++|+|+|-|+
T Consensus       156 ~~~~~~~~~~~~v~~~i~~G~i~p~Pi  182 (183)
T d1pqwa_         156 LQPARYRQLLQHILQHVADGKLEVLPV  182 (183)
T ss_dssp             HCHHHHHHHHHHHHHHHHTTSSCCCCC
T ss_pred             cCHHHHHHHHHHHHHHHHCCCCceeCC
Confidence                 1256889999999999999876

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.94  E-value=4.7e-27  Score=193.56  Aligned_cols=144  Identities=19%  Similarity=0.191  Sum_probs=123.0

Q ss_pred             eeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCC
Q 018627           12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        12 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      +|||+++.+++++  ++++++|.|+|++|||||||.++|||++|++.+.|..    .+|+++|+|++|+|++  ..+..+
T Consensus         3 ~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~   80 (152)
T d1xa0a1           3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRF   80 (152)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSC
T ss_pred             ceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCcc
Confidence            7999999999886  6688999999999999999999999999998888765    6889999999999998  456789


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||+|+......                       +                   ....|+||||+.+|++.++++|++
T Consensus        81 ~~g~~v~~~~~~~-----------------------~-------------------~~~~G~~aEy~~v~~~~~~~iP~~  118 (152)
T d1xa0a1          81 REGDEVIATGYEI-----------------------G-------------------VTHFGGYSEYARLHGEWLVPLPKG  118 (152)
T ss_dssp             CTTCEEEEESTTB-----------------------T-------------------TTBCCSSBSEEEECGGGCEECCTT
T ss_pred             ccCCEEEEecCcc-----------------------c-------------------cccCCCcceeeeehhhccccCCCC
Confidence            9999998762210                       0                   011369999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEc
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG  201 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~G  201 (353)
                      ++ .+||+++++..|++.++....+++ |++|||+|
T Consensus       119 l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         119 LE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             HH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            98 578889889899998887878876 99999975

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=7.6e-27  Score=195.97  Aligned_cols=168  Identities=24%  Similarity=0.264  Sum_probs=150.1

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      |++.|||.++|++.|||+++ +..++++|++|||+|+ |++|++++|+++++|+.+|++++++++|++.++++|++.+++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999998 6689999999999996 999999999999999879999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCC
Q 018627          245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG  323 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~  323 (353)
                      ++  +.++.+.+++.+.+ ++|++|||+|++..++.++++++++ |+++.+|....+..++.... ++++++++|++.++
T Consensus        80 ~~--~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          80 AS--MQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADLHYHAPLI-TLSEIQFVGSLVGN  155 (170)
T ss_dssp             TT--TSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCCCCCHHHH-HHHTCEEEECCSCC
T ss_pred             cC--CcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccCccccCHHHH-HhCCcEEEEEecCC
Confidence            86  57788888888776 8999999999988899999999997 99999998876666655443 56799999998765


Q ss_pred             CCCCCcHHHHHHHHHcCC
Q 018627          324 WKPKTDLPSLVNRYLKKV  341 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~  341 (353)
                         ++|++++++|+++||
T Consensus       156 ---~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 ---QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             ---HHHHHHHHHHHHTTS
T ss_pred             ---HHHHHHHHHHHHcCC
Confidence               478999999999997

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.94  E-value=4.3e-26  Score=192.20  Aligned_cols=173  Identities=48%  Similarity=0.907  Sum_probs=145.0

Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++++++..++.+|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            57899999999999999998889999999999999999999999999999998999999999999999999999999986


Q ss_pred             CCCccHHHHHHHHh-cCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRIT-DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~-~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                      + +.+..+..++.+ ++++|++||++|.+..+..++.++++++++++..|.... .........++++++++|++.+++.
T Consensus        82 ~-~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~-~~~~~~~~~~~~~~~i~Gs~~G~~~  159 (175)
T d1cdoa2          82 D-HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL-HDVATRPIQLIAGRTWKGSMFGGFK  159 (175)
T ss_dssp             G-CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS-SCEEECHHHHHTTCEEEECSGGGCC
T ss_pred             C-cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCC-cccCccHHHHHCCcEEEEEEEeCCc
Confidence            4 333444555554 449999999999988889999888886244555555544 3333344446779999999999888


Q ss_pred             CCCcHHHHHHHHHcCC
Q 018627          326 PKTDLPSLVNRYLKKV  341 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~  341 (353)
                      ++++++++++|+.+||
T Consensus       160 ~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         160 GKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            7889999999999997

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.94  E-value=2.3e-25  Score=186.75  Aligned_cols=167  Identities=24%  Similarity=0.310  Sum_probs=139.0

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +|+++||++. ++++||+++ ++.++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|++.++++|++..++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            4789998875 899999997 66899999999999999999999999999999 99999999999999999999987655


Q ss_pred             CCCCcc---HHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecC
Q 018627          246 NDNNEP---VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG  322 (353)
Q Consensus       246 ~~~~~~---~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~  322 (353)
                      +....+   ..+.+++..++++|++|||+|++..++.++++++++ |+++.+|.......+++... +.+++++.|++.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~-~~k~i~i~gs~~~  155 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVTVPLVNA-CAREIDIKSVFRY  155 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCCCCCHHHH-HTTTCEEEECCSC
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCCCCCcCHHHH-HHCCCEEEEEECC
Confidence            432333   334555555569999999999988899999999997 99999998776544444332 3579999998633


Q ss_pred             CCCCCCcHHHHHHHHHcCC
Q 018627          323 GWKPKTDLPSLVNRYLKKV  341 (353)
Q Consensus       323 ~~~~~~~~~~~~~~l~~g~  341 (353)
                          .++++++++++++||
T Consensus       156 ----~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         156 ----CNDYPIALEMVASGR  170 (170)
T ss_dssp             ----SSCHHHHHHHHHTTS
T ss_pred             ----HHHHHHHHHHHHcCC
Confidence                368999999999997

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=1e-25  Score=191.07  Aligned_cols=169  Identities=25%  Similarity=0.327  Sum_probs=145.3

Q ss_pred             hhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND  247 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~  247 (353)
                      ++.+|.+.|+..|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|++.++++.+
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~   82 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc
Confidence            46788999999999999988889999999999999999999999999999988999999999999999999999998863


Q ss_pred             CC-ccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh--hhcCcEEEeeecCC
Q 018627          248 NN-EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL--FLSGRTLKGSLFGG  323 (353)
Q Consensus       248 ~~-~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~--~~~~~~i~g~~~~~  323 (353)
                      .+ .++.+.+++.+++ ++|+||||+|++..++.++++++++ |+++.+|......++++.+..  ++++++++|++.++
T Consensus        83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            21 2344556777777 9999999999988899999999997 999999987665666666543  45799999998764


Q ss_pred             CCCCCcHHHHHHHHHcC
Q 018627          324 WKPKTDLPSLVNRYLKK  340 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g  340 (353)
                         .+++++++++++++
T Consensus       162 ---~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 ---TSHFVKTVSITSRN  175 (182)
T ss_dssp             ---HHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHC
Confidence               46899999999876

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.93  E-value=1.3e-25  Score=187.65  Aligned_cols=165  Identities=21%  Similarity=0.270  Sum_probs=142.0

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      +++++||.++|++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|++.++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            57899999999999999998 56899999999999999999999999999998 99999999999999999999999988


Q ss_pred             CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                      .  +.++.+.+++.+. +++.++++++++..++.++++++++ |+++.+|....+..+++... ++++++++|++.++  
T Consensus        79 ~--~~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~~~i~Gs~~~~--  151 (166)
T d1llua2          79 R--QEDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPGDFPTPIFDV-VLKGLHIAGSIVGT--  151 (166)
T ss_dssp             T--TSCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCSSEEEEEHHHH-HHTTCEEEECCSCC--
T ss_pred             c--chhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecCCCccCCHHHH-HhCCcEEEEEeecC--
Confidence            7  5677777777654 4666677777778999999999997 99999998766444444333 46799999987665  


Q ss_pred             CCCcHHHHHHHHHcC
Q 018627          326 PKTDLPSLVNRYLKK  340 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g  340 (353)
                       +++++++++++++|
T Consensus       152 -~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 -RADLQEALDFAGEG  165 (166)
T ss_dssp             -HHHHHHHHHHHHTT
T ss_pred             -HHHHHHHHHHHHCc
Confidence             57899999999987

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1.8e-25  Score=186.89  Aligned_cols=168  Identities=25%  Similarity=0.326  Sum_probs=145.4

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ||++|||++++++.|||+++ +..++++|++|||+|+|++|++++|+++..|+ +|++++++++|++.++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            58999999999999999998 56899999999999999999999999999999 89999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          246 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                      .  +.++.+.++..+++..|++ +++++...++.++++++++ |+++.+|....+..+++... +++++++.|++.++  
T Consensus        79 ~--~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~~~~~~~~~~~-~~~~~~i~gs~~~~--  151 (168)
T d1rjwa2          79 L--KEDAAKFMKEKVGGVHAAV-VTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIPIFDT-VLNGIKIIGSIVGT--  151 (168)
T ss_dssp             T--TSCHHHHHHHHHSSEEEEE-ESSCCHHHHHHHHHHEEEE-EEEEECCCCSSEEEEEHHHH-HHTTCEEEECCSCC--
T ss_pred             c--cchhhhhcccccCCCceEE-eecCCHHHHHHHHHHhccC-CceEecccccCCCCCCHHHH-HHCCcEEEEEeeCC--
Confidence            7  5678888888877655555 5566678899999999997 99999998776555544333 46799999987654  


Q ss_pred             CCCcHHHHHHHHHcCCCC
Q 018627          326 PKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~i~  343 (353)
                       +++++++++++++|||+
T Consensus       152 -~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 -RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             -HHHHHHHHHHHHTTSCC
T ss_pred             -HHHHHHHHHHHHhCCCC
Confidence             57899999999999985

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.93  E-value=1.7e-25  Score=188.07  Aligned_cols=165  Identities=20%  Similarity=0.249  Sum_probs=141.3

Q ss_pred             hhhhhhhchhhhHHHHHHHHhc-cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          168 LEKICLLSCGLSAGLGAAWNVA-DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       168 ~~~aa~l~~~~~ta~~al~~~~-~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      +.|+|.++|+++|||+++.+.. .+++|++|||+|+|++|++++|+++++|+++|++++++++|++.++++|++++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            5788999999999999997655 489999999999999999999999999988999999999999999999999999886


Q ss_pred             CCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCCC
Q 018627          247 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK  325 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (353)
                        + +..+...+.+.+ ++|++|||+|++..++.+++.++++ |+++++|.... .++++... ++++++++|++.++  
T Consensus        86 --~-~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~-~~~~~~~l-~~k~~~i~Gs~~~~--  157 (172)
T d1h2ba2          86 --R-DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGGE-LRFPTIRV-ISSEVSFEGSLVGN--  157 (172)
T ss_dssp             --S-CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSSC-CCCCHHHH-HHTTCEEEECCSCC--
T ss_pred             --c-cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCccc-ccCCHHHH-HhCCcEEEEEEecC--
Confidence              3 344555566666 9999999999988899999999997 99999997543 44443333 46799999998766  


Q ss_pred             CCCcHHHHHHHHHcCC
Q 018627          326 PKTDLPSLVNRYLKKV  341 (353)
Q Consensus       326 ~~~~~~~~~~~l~~g~  341 (353)
                       +++++++++|+++||
T Consensus       158 -~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         158 -YVELHELVTLALQGK  172 (172)
T ss_dssp             -HHHHHHHHHHHHTTS
T ss_pred             -HHHHHHHHHHHHcCC
Confidence             478999999999997

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.92  E-value=2e-25  Score=187.49  Aligned_cols=171  Identities=15%  Similarity=0.121  Sum_probs=134.1

Q ss_pred             CChhhhhhhchhhhHHHHHH---HHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          166 APLEKICLLSCGLSAGLGAA---WNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al---~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      +|++|||++++++.|||+++   .+....++|++|||+|+ |++|.+++|+|+.+|+ +|+++.++++|.+.++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            68999999999999999765   45577889999999987 9999999999999999 8999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeee
Q 018627          242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL  320 (353)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  320 (353)
                      +++++   ..+.+..+...++++|+|||++|+ ..+..++++|+++ |+++.+|...+ ...+++... ++|++++.|..
T Consensus        80 vi~~~---~~~~~~~~~~~~~gvD~vid~vgg-~~~~~~l~~l~~~-Griv~~G~~~g-~~~~~~~~~~~~k~~~i~Gv~  153 (176)
T d1xa0a2          80 VLARE---DVMAERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGG-AEVPTTVHPFILRGVSLLGID  153 (176)
T ss_dssp             EEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSS-SCCCCCSHHHHHTTCEEEECC
T ss_pred             eeecc---hhHHHHHHHhhccCcCEEEEcCCc-hhHHHHHHHhCCC-ceEEEeecccC-cccCCCHHHHHHCCcEEEEEe
Confidence            99875   334455555445599999999998 5799999999997 99999998755 333333333 46799999974


Q ss_pred             cCCCCCCCcHHHHHHHHHcCCCCCC
Q 018627          321 FGGWKPKTDLPSLVNRYLKKVRNTR  345 (353)
Q Consensus       321 ~~~~~~~~~~~~~~~~l~~g~i~~~  345 (353)
                      ... .+.++..++.+++ .|+|+|+
T Consensus       154 ~~~-~~~~~~~~~~~~l-ag~lkP~  176 (176)
T d1xa0a2         154 SVY-CPMDLRLRIWERL-AGDLKPD  176 (176)
T ss_dssp             SSS-CCHHHHHHHHHHH-HTTTCCC
T ss_pred             CCc-CCHHHHHHHHHHH-hcccCCC
Confidence            332 2346667777777 4888875

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=1.2e-25  Score=188.20  Aligned_cols=165  Identities=19%  Similarity=0.181  Sum_probs=139.9

Q ss_pred             ChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCC
Q 018627          167 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN  246 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~  246 (353)
                      +.+.||.+.|+..|+|+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|++.++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            4577899999999999998 46899999999999999999999999999999 899999999999999999999999876


Q ss_pred             CCCccHHHHHHHHhcCCccEEEeccCChH--HHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627          247 DNNEPVQQVIKRITDGGADYSFECIGDTG--MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW  324 (353)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~dvv~d~~g~~~--~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  324 (353)
                      + +.++.+    ...+++|+++||++...  .+..++++++++ |+++.+|.......+++.+. +++++++.|+..++ 
T Consensus        80 ~-~~~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~~~i~Gs~~g~-  151 (168)
T d1piwa2          80 E-EGDWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGS-  151 (168)
T ss_dssp             G-TSCHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSCCEEECGG-GCBSCEEEECCCCC-
T ss_pred             c-hHHHHH----hhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccccccHHHH-HhCCcEEEEEeeCC-
Confidence            3 333332    23348999999988643  467888999997 99999998877667776665 46799999997765 


Q ss_pred             CCCCcHHHHHHHHHcCCCC
Q 018627          325 KPKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       325 ~~~~~~~~~~~~l~~g~i~  343 (353)
                        +++++++++++++|+|+
T Consensus       152 --~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 --IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             --HHHHHHHHHHHHHTTCC
T ss_pred             --HHHHHHHHHHHHhCCCC
Confidence              57899999999999985

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=4.5e-25  Score=186.49  Aligned_cols=169  Identities=19%  Similarity=0.215  Sum_probs=137.3

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      +|++|||++++++.|||++|.+..++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|.+.++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5899999999999999999988889999999999987 7899999999999999 9999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhhhh-c-CcEEEeeec
Q 018627          245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-S-GRTLKGSLF  321 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~-~~~i~g~~~  321 (353)
                      ++  ++++.+.+++++++ ++|+++|++|+ +.+..++.+++++ |+++.+|...... .+.....+. + .+.+....+
T Consensus        80 ~~--~~d~~~~v~~~t~g~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~l  154 (179)
T d1qora2          80 YR--EEDLVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSSGAV-TGVNLGILNQKGSLYVTRPSL  154 (179)
T ss_dssp             TT--TSCHHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTTCCC-CCBCTHHHHHTTSCEEECCCH
T ss_pred             CC--CCCHHHHHHHHhCCCCeEEEEeCccH-HHHHHHHHHHhcC-CeeeecccccCCc-cccchhhhhccceEEEEeeEE
Confidence            87  68899999999988 99999999986 6789999999997 9999999766532 233332222 2 444433222


Q ss_pred             CC-CCCC----CcHHHHHHHHHcC
Q 018627          322 GG-WKPK----TDLPSLVNRYLKK  340 (353)
Q Consensus       322 ~~-~~~~----~~~~~~~~~l~~g  340 (353)
                      .. ...+    +.+.++++|+++|
T Consensus       155 ~~~~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         155 QGYITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             HHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred             eeecCCHHHHHHHHHHHHHHHHCc
Confidence            21 1122    2345677888887

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=8.9e-25  Score=178.19  Aligned_cols=129  Identities=19%  Similarity=0.162  Sum_probs=108.7

Q ss_pred             eeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCCC
Q 018627           13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEFN   86 (353)
Q Consensus        13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~~   86 (353)
                      |||+++.+++++  +++++++.|+|++|||||||.++|||++|.+...|.+    .+|+++|+|++|+|+++|.  ..++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            899999998877  7889999999999999999999999999999888875    6789999999999999876  4699


Q ss_pred             CCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCCC
Q 018627           87 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA  166 (353)
Q Consensus        87 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~l  166 (353)
                      +||+|+.....                       .|                   ...+|+||||+++|++.++++|+++
T Consensus        79 ~g~~v~~~~~~-----------------------~g-------------------~~~~G~~Aey~~v~~~~vv~lP~~l  116 (146)
T d1o89a1          79 AGQEVLLTGWG-----------------------VG-------------------ENHWGGLAEQARVKGDWLVAMPQGQ  116 (146)
T ss_dssp             TTCEEEEECTT-----------------------BT-------------------TTBCCSSBSEEEECGGGCEECCTTS
T ss_pred             ceeeEEeeccc-----------------------ce-------------------ecCCCcceeeeeeeeeeEEECCCCC
Confidence            99999876321                       01                   1123699999999999999999999


Q ss_pred             ChhhhhhhchhhhHHHHHH
Q 018627          167 PLEKICLLSCGLSAGLGAA  185 (353)
Q Consensus       167 ~~~~aa~l~~~~~ta~~al  185 (353)
                      |+++||+++++..||+.++
T Consensus       117 s~~eAA~l~~a~~tA~~~~  135 (146)
T d1o89a1         117 AAKEISLSEAPNFAEAIIN  135 (146)
T ss_dssp             CCEEECGGGHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHHH
Confidence            9999999998877776543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.91  E-value=3.7e-24  Score=181.38  Aligned_cols=164  Identities=20%  Similarity=0.240  Sum_probs=135.4

Q ss_pred             hhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          172 CLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       172 a~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      +++.++++|||++|.+..++++|++|||+|+ |++|++++|+|+..|+ +||++++++++.+.++++|++++++++  +.
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~--~~   84 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYK--TV   84 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETT--SC
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhcccc--cc
Confidence            5677899999999999999999999999987 8899999999999999 999999999999999999999999887  55


Q ss_pred             cHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC-----CCceecchhh-hhcCcEEEeeecCC
Q 018627          251 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL-----KPEVAAHYGL-FLSGRTLKGSLFGG  323 (353)
Q Consensus       251 ~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-----~~~~~~~~~~-~~~~~~i~g~~~~~  323 (353)
                      ++.+.+.+.+.+ ++|+|||++|+ +.++..+++++++ |+++.+|....     .....+.+.. +++++++.|++...
T Consensus        85 ~~~~~~~~~~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          85 NSLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             SCHHHHHHHHCTTCEEEEEESSCH-HHHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             cHHHHHHHHhhcCCCceeEEecCc-hhhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence            666666665555 99999999996 7889999999997 99999996432     1122233333 35799999998777


Q ss_pred             CCCC---CcHHHHHHHHHcC
Q 018627          324 WKPK---TDLPSLVNRYLKK  340 (353)
Q Consensus       324 ~~~~---~~~~~~~~~l~~g  340 (353)
                      |...   +.++++++|+++|
T Consensus       163 ~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         163 WQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT
T ss_pred             cChHHHHHHHHHHHHHHhCc
Confidence            6422   4578888998876

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=5.5e-26  Score=189.04  Aligned_cols=148  Identities=18%  Similarity=0.162  Sum_probs=123.7

Q ss_pred             eeeEEEEecCCCC--eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC----CCCcccccceeEEEEEeCCCCCCC
Q 018627           12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA----IFPRIFGHEASGIVESVGPGVTEF   85 (353)
Q Consensus        12 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~----~~p~~~G~e~~G~V~~vG~~~~~~   85 (353)
                      +|||+++.+.+.+  +++++++.|++++|||||||+++|||++|++.+.|..    .+|.++|+|++|+|++  +.+.++
T Consensus         3 ~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~~   80 (162)
T d1tt7a1           3 LFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPRF   80 (162)
T ss_dssp             EEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTTC
T ss_pred             cEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--cccccc
Confidence            7999999976654  9999999999999999999999999999999888875    5678999999999998  456789


Q ss_pred             CCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCCC
Q 018627           86 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI  165 (353)
Q Consensus        86 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~~  165 (353)
                      ++||+|+.....                             .|             ....|+||||+.+|++.++++|++
T Consensus        81 ~~g~~v~~~~~~-----------------------------~g-------------~~~~G~~aey~~v~~~~l~~iP~~  118 (162)
T d1tt7a1          81 AEGDEVIATSYE-----------------------------LG-------------VSRDGGLSEYASVPGDWLVPLPQN  118 (162)
T ss_dssp             CTTCEEEEESTT-----------------------------BT-------------TTBCCSSBSSEEECGGGEEECCTT
T ss_pred             ccceeeEeeecc-----------------------------ce-------------eccccccceEEEecHHHEEECCCC
Confidence            999999876321                             00             112369999999999999999999


Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-Ch
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GT  204 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~  204 (353)
                      +++++||.+++.++|+|.++.+ .+...+++|||+|+ |+
T Consensus       119 ls~~~Aa~~~~~~~ta~~~~~~-~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         119 LSLKEAMVDQLLTIVDREVSLE-ETPGALKDILQNRIQGR  157 (162)
T ss_dssp             CCHHHHHHSCSTTSEEEEECST-THHHHHHHTTTTCCSSE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh-cCCCCCCEEEEECCcce
Confidence            9999999999999999987633 34455677888876 53

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.9e-24  Score=180.82  Aligned_cols=165  Identities=19%  Similarity=0.239  Sum_probs=134.2

Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      +.+++++|.+.|+..|+|+++ +.+++++|++|||+|+|++|++++|+|+++|+ +++++++++++++.++++|++.+++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEE
Confidence            346778899999999999998 66899999999999999999999999999999 7778889999999999999999998


Q ss_pred             CCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCC
Q 018627          245 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG  323 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~  323 (353)
                      +.  +.+..    ....+++|++||++|.+..+..++++++++ |+++.+|..... ...+.... +++++++.|++.++
T Consensus        81 ~~--~~~~~----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~l~~k~~~i~Gs~~~~  152 (168)
T d1uufa2          81 SR--NADEM----AAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATP-HKSPEVFNLIMKRRAIAGSMIGG  152 (168)
T ss_dssp             TT--CHHHH----HTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC
T ss_pred             Cc--hhhHH----HHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCC-cccccHHHHHHCCcEEEEEeecC
Confidence            86  32221    111238999999999888899999999997 999999986553 22333333 35799999998765


Q ss_pred             CCCCCcHHHHHHHHHcCCC
Q 018627          324 WKPKTDLPSLVNRYLKKVR  342 (353)
Q Consensus       324 ~~~~~~~~~~~~~l~~g~i  342 (353)
                         +++++++++++.+++|
T Consensus       153 ---~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 ---IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             ---HHHHHHHHHHHHHHTC
T ss_pred             ---HHHHHHHHHHHHHcCC
Confidence               5789999999998876

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=7.4e-26  Score=190.67  Aligned_cols=152  Identities=16%  Similarity=0.119  Sum_probs=126.6

Q ss_pred             ceeeEEEEecCCCC-----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCC-------------CCCccccccee
Q 018627           11 ITCKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQA-------------IFPRIFGHEAS   72 (353)
Q Consensus        11 ~~~~a~~~~~~~~~-----l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~-------------~~p~~~G~e~~   72 (353)
                      .+|||+++.+.++|     ++..++|.|+|+++||||||++++||++|++.++|..             .+|.++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            48999999999886     5556777888999999999999999999999887764             46678999999


Q ss_pred             EEEEEeCCCCCCCCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeE
Q 018627           73 GIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYT  152 (353)
Q Consensus        73 G~V~~vG~~~~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~  152 (353)
                      |+|++.|.++..++.||||.....                                               ..|+|+||+
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~~~-----------------------------------------------~~g~~aey~  114 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPSHV-----------------------------------------------NFGTWRTHA  114 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESSS-----------------------------------------------CCCCSBSEE
T ss_pred             cccccccccccccccccceecccc-----------------------------------------------cccccccee
Confidence            999999999999999999986522                                               125899999


Q ss_pred             EEeCCceEECCCCCChhhhhhhchhhhHHHHHHHH-hccCCCCCEEEEEc-C-ChHHHHHHH
Q 018627          153 VVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN-VADISKGSTVVIFG-L-GTVGLSVAQ  211 (353)
Q Consensus       153 ~~~~~~v~~iP~~l~~~~aa~l~~~~~ta~~al~~-~~~~~~g~~vLV~G-a-g~vG~~a~~  211 (353)
                      +++++.++++|++++.+.  ++.+...|||+++.. ..++++|++|||+| + |++|++++|
T Consensus       115 ~v~~~~~~~iP~~~~~~~--a~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         115 LGNDDDFIKLPNPAQSKA--NGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             EEEGGGEEEECCHHHHHH--TTCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             eehhhhccCCCccchhhh--hccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence            999999999999775433  344577788988754 45799999999997 4 679988765

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=5.6e-24  Score=178.44  Aligned_cols=159  Identities=19%  Similarity=0.187  Sum_probs=122.9

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN  244 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~  244 (353)
                      ++++|||++++++.|||+++. ..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.++++|++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            589999999999999999985 589999999999997 9999999999999999 8999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecC
Q 018627          245 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFG  322 (353)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~  322 (353)
                      +.    +..   .+.+.+ ++|+|||++|.  .++.++++++++ |+++.+|.... ...++++.. +.+++++.|++..
T Consensus        79 ~~----~~~---~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~-G~~v~~G~~~g-~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          79 YA----EVP---ERAKAWGGLDLVLEVRGK--EVEESLGLLAHG-GRLVYIGAAEG-EVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GG----GHH---HHHHHTTSEEEEEECSCT--THHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hh----hhh---hhhhccccccccccccch--hHHHHHHHHhcC-CcEEEEeCCCC-CCCCccHHHHHHCCcEEEEEeCc
Confidence            74    222   233334 89999999884  578999999996 99999998654 223333333 4679999999877


Q ss_pred             CCCCC-CcHHHHHHHH
Q 018627          323 GWKPK-TDLPSLVNRY  337 (353)
Q Consensus       323 ~~~~~-~~~~~~~~~l  337 (353)
                      .+.+. +.+++++.++
T Consensus       148 ~~~~~~~~~~~~~~~l  163 (171)
T d1iz0a2         148 PLLREGALVEEALGFL  163 (171)
T ss_dssp             HHTTCHHHHHHHHHHH
T ss_pred             ChhhhHHHHHHHHHHH
Confidence            65422 2333444443

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=8.2e-24  Score=180.31  Aligned_cols=172  Identities=19%  Similarity=0.209  Sum_probs=134.9

Q ss_pred             CChhhhhhhchhhhHHHHHHHHhccCCCCCEEEEE-cC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hhHHHHHhCCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF-GL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAKAFGV  239 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~-Ga-g~vG~~a~~la~~~g~~~vi~~~~~~----~~~~~~~~~G~  239 (353)
                      +|++|||++++++.|||++|.+..++++|+++||+ |+ |++|++++|+||++|+ +||++.++.    ++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            58999999999999999999888999999999997 55 8999999999999999 787775543    44567789999


Q ss_pred             ceEeCCCC-CCccHHHHHHHH---hcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCc
Q 018627          240 TEFLNPND-NNEPVQQVIKRI---TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGR  314 (353)
Q Consensus       240 ~~~~~~~~-~~~~~~~~~~~~---~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~  314 (353)
                      ++++++++ +...+.+.+++.   .++++|++||++|+ ..+..++++++++ |++|.+|.... ....++... +++++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNN-GLMLTYGGMSF-QPVTIPTSLYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTT-CEEEECCCCSS-CCEEECHHHHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCC-cEEEEECCccC-CCccCcHHHHHHCCc
Confidence            99998742 123444455543   34489999999996 5678999999997 99999997654 233334333 35799


Q ss_pred             EEEeeecCCCCC------CCcHHHHHHHHHcCC
Q 018627          315 TLKGSLFGGWKP------KTDLPSLVNRYLKKV  341 (353)
Q Consensus       315 ~i~g~~~~~~~~------~~~~~~~~~~l~~g~  341 (353)
                      ++.|++.+.|..      ++.+.++++|+++||
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            999987765432      255889999999986

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=4.1e-23  Score=175.62  Aligned_cols=172  Identities=19%  Similarity=0.194  Sum_probs=132.6

Q ss_pred             CCChhhhhhhchhhhHHHHHHHHhccCCCC--CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHH-HHHhCCCc
Q 018627          165 IAPLEKICLLSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVT  240 (353)
Q Consensus       165 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~g--~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~G~~  240 (353)
                      +||+.+.| ++++..|||++|++..++++|  ++|||+|+ |++|++++|+|+..|+++|+++.+++++.. +.+++|++
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            35666654 667899999999999999987  88999986 999999999999999977877766665544 55679999


Q ss_pred             eEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCC-Cce----ec----chhhhh
Q 018627          241 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEV----AA----HYGLFL  311 (353)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~----~~----~~~~~~  311 (353)
                      .++|+.  ++++.+.+++.++.++|+|||++|+ +.++.++++++++ |+++.+|..+.. ...    +.    ....+.
T Consensus        80 ~vi~~~--~~~~~~~~~~~~~~GvDvv~D~vGg-~~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          80 AAVNYK--TGNVAEQLREACPGGVDVYFDNVGG-DISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EEEETT--SSCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHH
T ss_pred             EEeecc--chhHHHHHHHHhccCceEEEecCCc-hhHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            999998  6789999999887799999999996 6789999999997 999999974331 111    11    111224


Q ss_pred             cCcEEEeeecCCCCCC--CcHHHHHHHHHcCC
Q 018627          312 SGRTLKGSLFGGWKPK--TDLPSLVNRYLKKV  341 (353)
Q Consensus       312 ~~~~i~g~~~~~~~~~--~~~~~~~~~l~~g~  341 (353)
                      ++++++|+....+.++  +.++++.+|+++||
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            6899999877665432  45778889999986

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=4e-22  Score=170.37  Aligned_cols=166  Identities=23%  Similarity=0.281  Sum_probs=137.9

Q ss_pred             hhhhhhchhhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCC
Q 018627          169 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN  248 (353)
Q Consensus       169 ~~aa~l~~~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~  248 (353)
                      ++.++++.+++|||+++ +.+++++|++|||+|+|++|++++++|+.+|+++|++++.+++|++.++++|+++++++.  
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~--   78 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSL--   78 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTS--
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCC--
Confidence            57788899999999997 678999999999999999999999999999998999999999999999999999999887  


Q ss_pred             CccHHHHHHHHhcC-CccEEEeccCC---------------hHHHHHHHHHhccCCceEEEEcCCCCCCc----------
Q 018627          249 NEPVQQVIKRITDG-GADYSFECIGD---------------TGMITTALQSCCDGWGLAVTLGVPKLKPE----------  302 (353)
Q Consensus       249 ~~~~~~~~~~~~~~-~~dvv~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~~~~~----------  302 (353)
                      +.++.+.+.+++++ ++|++||++|.               +..++.+++.++++ |+++.+|.+.....          
T Consensus        79 ~~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~~  157 (195)
T d1kola2          79 DTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIG  157 (195)
T ss_dssp             SSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTT
T ss_pred             CcCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhcC
Confidence            67899999999888 99999999984               36899999999996 99999998654322          


Q ss_pred             -eecchhh-hhcCcEEEeeecCCCCCCCcHHHHHHHHHcCC
Q 018627          303 -VAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKV  341 (353)
Q Consensus       303 -~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~l~~g~  341 (353)
                       +.+.... +.+++++.+   +....+..++++++++.++|
T Consensus       158 ~~~~~~~~~~~k~~~i~~---g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         158 SLSIRFGLGWAKSHSFHT---GQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCCCHHHHHHTTCEEEE---SSCCHHHHHHHHHHHHHTTS
T ss_pred             ceeeeHHHHHhhcceecc---CCCchHHHHHHHHHHHHcCC
Confidence             1222222 245777753   22222455789999998876

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=8.9e-21  Score=159.13  Aligned_cols=161  Identities=14%  Similarity=0.133  Sum_probs=124.1

Q ss_pred             CChhhhhhhchhhhHHHHHHH---HhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce
Q 018627          166 APLEKICLLSCGLSAGLGAAW---NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE  241 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~---~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~  241 (353)
                      |++.|||.++++..|||++++   +......+++|||+|+ |++|.+++|+||.+|+ +||++.+++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578999999999999998764   3333445679999987 9999999999999999 8999999999999999999999


Q ss_pred             EeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeee
Q 018627          242 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL  320 (353)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~  320 (353)
                      ++++++  .++.   +.+....+|.++|++|+ ..+...+++++++ |+++.+|.... ...+++... +++++++.|++
T Consensus        80 vi~~~~--~~~~---~~l~~~~~~~vvD~Vgg-~~~~~~l~~l~~~-Griv~~G~~~~-~~~~~~~~~~~~k~~~i~G~~  151 (177)
T d1o89a2          80 VLPRDE--FAES---RPLEKQVWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGG-FTLPTTVMPFILRNVRLQGVD  151 (177)
T ss_dssp             EEEGGG--SSSC---CSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTC-SCCCCCSHHHHHHCCEEEECC
T ss_pred             cccccc--HHHH---HHHHhhcCCeeEEEcch-HHHHHHHHHhccc-cceEeecccCC-ccccccHHHHHHCCCeEEEEe
Confidence            999863  2222   12233478999999997 6789999999996 99999998765 333333333 46799999986


Q ss_pred             cCCCCCCCcHHHHHHH
Q 018627          321 FGGWKPKTDLPSLVNR  336 (353)
Q Consensus       321 ~~~~~~~~~~~~~~~~  336 (353)
                      ..... +++..++.+.
T Consensus       152 ~~~~~-~~~~~~~~~~  166 (177)
T d1o89a2         152 SVMTP-PERRAQAWQR  166 (177)
T ss_dssp             SSSCC-HHHHHHHHHH
T ss_pred             cccCC-HHHHHHHHHH
Confidence            55433 3444444433

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.81  E-value=7.8e-21  Score=157.98  Aligned_cols=159  Identities=18%  Similarity=0.138  Sum_probs=117.5

Q ss_pred             hhhHHHH---HHHHhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccH
Q 018627          177 GLSAGLG---AAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV  252 (353)
Q Consensus       177 ~~~ta~~---al~~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~  252 (353)
                      +..|||.   +|.+.....++++|||+|+ |++|.+++|+|+.+|+ +|+++.++++|.+.++++|++.++++++   ..
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~---~~   79 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED---VY   79 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH---HC
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc---hh
Confidence            4456664   4555556777889999987 9999999999999999 8999999999999999999999987641   11


Q ss_pred             HHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCCCCceecchhh-hhcCcEEEeeecCCCCCCCcHH
Q 018627          253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLP  331 (353)
Q Consensus       253 ~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~  331 (353)
                      .+.++...++++|+|||++|+ ..+..++++++++ |+++.+|.... ...+++... ++++++++|...... +.+...
T Consensus        80 ~~~~~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~-G~iv~~G~~~g-~~~~~~~~~l~~k~~~i~G~~~~~~-~~~~~~  155 (167)
T d1tt7a2          80 DGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGG-GEVPATVYPFILRGVSLLGIDSVYC-PMDVRA  155 (167)
T ss_dssp             SSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSC-SCEEECSHHHHTSCCEEEECCSSSC-CHHHHH
T ss_pred             chhhhcccCCCceEEEecCcH-HHHHHHHHHhccC-ceEEEeeccCC-CcccCCHHHHHHCCcEEEEEecCCC-CHHHHH
Confidence            122223334499999999998 6789999999997 99999998876 444444333 467999999754332 234455


Q ss_pred             HHHHHHHcCCCCC
Q 018627          332 SLVNRYLKKVRNT  344 (353)
Q Consensus       332 ~~~~~l~~g~i~~  344 (353)
                      ++.+.+. +.++|
T Consensus       156 ~~~~~l~-~~L~P  167 (167)
T d1tt7a2         156 AVWERMS-SDLKP  167 (167)
T ss_dssp             HHHHHTT-TTSCC
T ss_pred             HHHHHHH-hcCCC
Confidence            5555553 34543

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.64  E-value=2.3e-15  Score=121.42  Aligned_cols=133  Identities=15%  Similarity=0.091  Sum_probs=99.9

Q ss_pred             ceeeEEEEecC--CCC----eEEEEeecCCCCCCeEEEEEeeeecchhhhhhhccCCCCCcccccceeEEEEEeCCCCCC
Q 018627           11 ITCKAAVAWGA--GQP----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQAIFPRIFGHEASGIVESVGPGVTE   84 (353)
Q Consensus        11 ~~~~a~~~~~~--~~~----l~~~~~~~p~~~~~eVlVrv~~~~i~~~D~~~~~g~~~~p~~~G~e~~G~V~~vG~~~~~   84 (353)
                      .+.|+|++.+.  +.|    |++++.+.|+|++||||||+++.++++.... +.......-++..+.+|+|++  ++..+
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~-~~~~~~~g~~~~g~~vg~Vv~--S~~~~   78 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRI-ASKRLKEGAVMMGQQVARVVE--SKNSA   78 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHH-HGGGSCTTSBCCCCEEEEEEE--ESCTT
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccc-cccccccCCccccceEEEEEE--eCCCc
Confidence            36788998764  433    9999999999999999999999999986432 222224445667789999988  56788


Q ss_pred             CCCCCeEEeecccCCCCCcccccCCCCCcccccccccccccCCccccccccCCccccccCccceeeeEEEeCCceEECCC
Q 018627           85 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS  164 (353)
Q Consensus        85 ~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~v~~iP~  164 (353)
                      |++||+|++.                                                   ++|+||.+++.+.+.++|+
T Consensus        79 f~~GD~V~g~---------------------------------------------------~gw~ey~v~~~~~l~kv~~  107 (147)
T d1v3va1          79 FPAGSIVLAQ---------------------------------------------------SGWTTHFISDGKGLEKLLT  107 (147)
T ss_dssp             SCTTCEEEEC---------------------------------------------------CCSBSEEEECSSSCEECCT
T ss_pred             ccCCCEEEEc---------------------------------------------------cCCEeEEEeccceeeEccc
Confidence            9999999875                                                   4899999999999999987


Q ss_pred             CCCh-----hhhhhhchhhhH-HHHHHHHhccCCCCCEEEE
Q 018627          165 IAPL-----EKICLLSCGLSA-GLGAAWNVADISKGSTVVI  199 (353)
Q Consensus       165 ~l~~-----~~aa~l~~~~~t-a~~al~~~~~~~~g~~vLV  199 (353)
                      +++.     ...+++.....| ||..+...  .+.|++||+
T Consensus       108 ~~~~~~~~~~~~~~lG~~Gmtaay~gl~~~--~k~Getvv~  146 (147)
T d1v3va1         108 EWPDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVT  146 (147)
T ss_dssp             TCCTTSSCCCEEEEECGGGHHHHHHHHHTT--CCSSEEEEE
T ss_pred             cccccccchhhhHhccccchHHHHHHhhCC--CCCCCEEEe
Confidence            6543     234455555555 55566443  467999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.44  E-value=6.3e-14  Score=99.46  Aligned_cols=73  Identities=15%  Similarity=0.192  Sum_probs=65.9

Q ss_pred             CChhhhhhhchhhhHHHHHHHH---hccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627          166 APLEKICLLSCGLSAGLGAAWN---VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV  239 (353)
Q Consensus       166 l~~~~aa~l~~~~~ta~~al~~---~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~  239 (353)
                      +|++||+.++++..|||.+++.   ....+++++|||+|+ |++|.+++|+++.+|+ +|+++.+++++.++++++||
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            5889999999999999988653   445689999999987 9999999999999999 89999999999999999885

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.93  E-value=3.8e-05  Score=66.00  Aligned_cols=106  Identities=21%  Similarity=0.218  Sum_probs=74.0

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+ .|.. +..+..+.+.+..  -+++|++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~G~iDiL   80 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLE-DERERVRFVEEAAYALGRVDVL   80 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTT-CHHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHHHHhcCCCCeE
Confidence            47899999997 8999999999999999 99999999999888888776543 2332 1233333333322  2489999


Q ss_pred             EeccCCh-------------------------HHHHHHHHHhcc-CCceEEEEcCCCC
Q 018627          268 FECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGVPKL  299 (353)
Q Consensus       268 ~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~~  299 (353)
                      ++++|..                         ...+.++..|++ ++|++|.+++...
T Consensus        81 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~  138 (248)
T d2d1ya1          81 VNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG  138 (248)
T ss_dssp             EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc
Confidence            9998852                         123344445543 2489999986543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=97.89  E-value=9.5e-06  Score=64.92  Aligned_cols=99  Identities=22%  Similarity=0.222  Sum_probs=73.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +..+|+|+|+|..|+.+++.|+.+|+ .|.+.|.+.++++.++......+ ..+. ....+.+.++     ..|+|+.++
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~-~~~~l~~~~~-----~aDivI~aa  103 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYS-NSAEIETAVA-----EADLLIGAV  103 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEEC-CHHHHHHHHH-----TCSEEEECC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehh-hhhhHHHhhc-----cCcEEEEee
Confidence            45789999999999999999999999 99999999999998877533221 1111 1234444444     489999987


Q ss_pred             CCh-----H-HHHHHHHHhccCCceEEEEcCCCC
Q 018627          272 GDT-----G-MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       272 g~~-----~-~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      =-+     . ..++.++.|+++ ..+|++....+
T Consensus       104 lipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidqG  136 (168)
T d1pjca1         104 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQG  136 (168)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTC
T ss_pred             ecCCcccCeeecHHHHhhcCCC-cEEEEeecCCC
Confidence            432     1 246777999997 99999986544

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.86  E-value=4.8e-05  Score=65.52  Aligned_cols=106  Identities=14%  Similarity=0.142  Sum_probs=72.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeC-CCC-CCccHHHHHHHHh--cCCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLN-PND-NNEPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~-~~~-~~~~~~~~~~~~~--~~~~dv  266 (353)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++...... .+- +..+..+.+....  -+.+|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            6899999987 8999999999999999 999999999887765 4566544321 111 1223333333322  248999


Q ss_pred             EEeccCCh-------------------------HHHHHHHHHhccCCceEEEEcCCCC
Q 018627          267 SFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       267 v~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +++++|..                         ...+.++..|+..+|++|.+++...
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~  141 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS  141 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh
Confidence            99999852                         1234455566543499999987443

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=4.2e-05  Score=65.79  Aligned_cols=102  Identities=17%  Similarity=0.258  Sum_probs=69.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEe--CCCCCCccHHHHHHHHh--cCCccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFL--NPNDNNEPVQQVIKRIT--DGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~--~~~~~~~~~~~~~~~~~--~~~~dv  266 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ ++....+  |..+ ..+..+.+.+..  -+++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQ-EDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTS-HHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCC-HHHHHHHHHHHHHhcCCCCE
Confidence            6899999997 8999999999999999 99999999998887755 4432222  3221 233333333322  247999


Q ss_pred             EEeccCCh--------------------------HHHHHHHHHhccCCceEEEEcC
Q 018627          267 SFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       267 v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +++++|..                          ...+.++..|++++|++|.+++
T Consensus        83 lVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS  138 (250)
T d1ydea1          83 VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISS  138 (250)
T ss_dssp             EEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred             EEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccc
Confidence            99998841                          1233444455543489999986

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.74  E-value=0.00031  Score=55.79  Aligned_cols=100  Identities=17%  Similarity=0.244  Sum_probs=69.2

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHH-HHHhCCCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~-~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      +...--.+++|||+|+|.+|..+++.+...|+++++++.|+.++.+ +++++|.. .+.+    .++.+.+.     .+|
T Consensus        17 ~~~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~----~~~~~~l~-----~~D   86 (159)
T d1gpja2          17 RELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRF----DELVDHLA-----RSD   86 (159)
T ss_dssp             HHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCG----GGHHHHHH-----TCS
T ss_pred             HHhCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccc----hhHHHHhc-----cCC
Confidence            3334457899999999999999999999999988999999988865 55667743 3333    34555544     499


Q ss_pred             EEEeccCChH------HHHHHHHHhccCCc--eEEEEcCC
Q 018627          266 YSFECIGDTG------MITTALQSCCDGWG--LAVTLGVP  297 (353)
Q Consensus       266 vv~d~~g~~~------~~~~~~~~l~~~~G--~~v~~g~~  297 (353)
                      +||.|++.+.      .+...++.-..+ .  .+++++.+
T Consensus        87 ivi~atss~~~ii~~~~i~~~~~~r~~~-~~~~iiDlavP  125 (159)
T d1gpja2          87 VVVSATAAPHPVIHVDDVREALRKRDRR-SPILIIDIANP  125 (159)
T ss_dssp             EEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEEEECCSS
T ss_pred             EEEEecCCCCccccHhhhHHHHHhcccC-CCeEEEeecCC
Confidence            9999998643      233333332322 2  57777655

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.73  E-value=4.3e-05  Score=61.88  Aligned_cols=104  Identities=16%  Similarity=0.217  Sum_probs=73.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCC------------------ccHHH
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN------------------EPVQQ  254 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~------------------~~~~~  254 (353)
                      +..+|+|+|+|..|+.+++.|+.+|+ +|.+.|.+.++++.+++++...+.......                  ....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            34689999999999999999999999 999999999999999999876542110000                  01112


Q ss_pred             HHHHHhcCCccEEEeccCCh-----H-HHHHHHHHhccCCceEEEEcCCCC
Q 018627          255 VIKRITDGGADYSFECIGDT-----G-MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       255 ~~~~~~~~~~dvv~d~~g~~-----~-~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      .+.+... ..|+|+-++=-+     . .-++.++.|+++ +.+|++....+
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidqG  155 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAG  155 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGT
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecCC
Confidence            2222222 589999876321     1 246777999997 99999876433

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=8.4e-05  Score=63.53  Aligned_cols=101  Identities=24%  Similarity=0.417  Sum_probs=69.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCce---EeCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE---FLNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~---~~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++...   ..|..+ ..+..+.+.+..  .+++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD-PASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC-HHHhhhhhhhhhcccCCcc
Confidence            5899999987 8999999999999999 9999999999877664 344332   223321 233333333332  24899


Q ss_pred             EEEeccCCh-------------------------HHHHHHHHHh--ccCCceEEEEcC
Q 018627          266 YSFECIGDT-------------------------GMITTALQSC--CDGWGLAVTLGV  296 (353)
Q Consensus       266 vv~d~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~g~  296 (353)
                      ++++++|..                         ...+.++..|  +. +|++|.+++
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS  137 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGS  137 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecc
Confidence            999998752                         1234444455  33 499999986

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.65  E-value=0.0002  Score=61.74  Aligned_cols=79  Identities=28%  Similarity=0.406  Sum_probs=55.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .|+++||+|+ +++|++.+..+...|+ +|+.+++++++++.+    ++.|....   .|..+ +.++.+.+....  -+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence            6899999997 8999999999999999 999999999887654    34554432   23221 233333333322  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus        82 ~iDilVnnaG~   92 (260)
T d1zema1          82 KIDFLFNNAGY   92 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCeehhhhcc
Confidence            89999998874

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=0.00026  Score=60.43  Aligned_cols=106  Identities=18%  Similarity=0.195  Sum_probs=70.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHH--hcC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRI--TDG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~--~~~  262 (353)
                      .|+.+||+|+ +++|...+..+...|+ +|+.+++++++++.+    ++.|....   .|..+ .++..+.++..  ..+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEIG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcC
Confidence            6899999998 8999999999999999 999999999887755    34554332   23321 22333333332  234


Q ss_pred             CccEEEeccCCh-------------------------HHHHHHHHHhcc-CCceEEEEcCCCCC
Q 018627          263 GADYSFECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGVPKLK  300 (353)
Q Consensus       263 ~~dvv~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~~~  300 (353)
                      .+|++++++|..                         ...+.++..|.+ ++|++|.+++....
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~  147 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH  147 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc
Confidence            799999999863                         122334444433 24899999987664

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.62  E-value=0.00021  Score=61.24  Aligned_cols=102  Identities=19%  Similarity=0.326  Sum_probs=68.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-----HhCCCceE---eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-----KAFGVTEF---LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+     ++.|....   .|..+ ..+..+.+.+..  -
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEKF   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence            5899999997 8999999999999999 999999998876533     34565432   23321 233333333322  2


Q ss_pred             CCccEEEeccCCh-------------------------HHHHHHHHHhcc-CCceEEEEcC
Q 018627          262 GGADYSFECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGV  296 (353)
Q Consensus       262 ~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~  296 (353)
                      +++|++++++|..                         ...+.++..|++ ++|++|.+++
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence            4899999998852                         223444555643 2489999976

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.61  E-value=0.00018  Score=61.85  Aligned_cols=79  Identities=28%  Similarity=0.289  Sum_probs=56.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE---eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      +|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+ ++++....   .|..+ +.+..+.+.+..  -+++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC-HHHHHHHHHHHHHHcCCcc
Confidence            6899999998 8999999999999999 899999999887765 55654332   23221 233333333322  24899


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        82 ilVnnAg~   89 (254)
T d1hdca_          82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEecCcc
Confidence            99999885

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.59  E-value=1.6e-05  Score=66.76  Aligned_cols=108  Identities=15%  Similarity=0.128  Sum_probs=74.2

Q ss_pred             hhhHHHHHHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccH
Q 018627          177 GLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPV  252 (353)
Q Consensus       177 ~~~ta~~al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~  252 (353)
                      +...|.  +.+.+++++|++||.+|+| .|..++.+++..|. +|++++.+++-.+.+    +++|.+.+.....   +.
T Consensus        64 P~~~a~--ml~~L~l~~g~~VLeIGsG-sGY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g---d~  136 (215)
T d1jg1a_          64 PHMVAI--MLEIANLKPGMNILEVGTG-SGWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG---DG  136 (215)
T ss_dssp             HHHHHH--HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CG
T ss_pred             hhhHHH--HHHhhccCccceEEEecCC-CChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC---cc
Confidence            444443  3477899999999999875 57777788877775 899999998765544    5578766543221   11


Q ss_pred             HHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627          253 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       253 ~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .+-  ....++||+|+-+.+.+......++.|+++ |++|..
T Consensus       137 ~~g--~~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         137 SKG--FPPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             GGC--CGGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             ccC--CcccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence            000  011248999998777656667788999997 999864

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=0.0002  Score=61.14  Aligned_cols=79  Identities=16%  Similarity=0.175  Sum_probs=56.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++....+..+-.+.+-.+.+.+.. +++|+++++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-g~iDilVnn   83 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV-GPVDLLVNN   83 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC-CCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHh-CCceEEEec
Confidence            7899999997 8999999999999999 999999999987766 44544333222211332223332222 389999999


Q ss_pred             cCC
Q 018627          271 IGD  273 (353)
Q Consensus       271 ~g~  273 (353)
                      +|.
T Consensus        84 Ag~   86 (244)
T d1pr9a_          84 AAV   86 (244)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            875

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.57  E-value=0.00034  Score=60.21  Aligned_cols=79  Identities=14%  Similarity=0.217  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHH---Hhc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKR---ITD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~---~~~  261 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|....   .|..+ ..+..+.+.+   ..+
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH   84 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC-HHHHHHHHHHHHHHhC
Confidence            6899999998 8999999999999999 899999999887654    33454332   23221 2333333333   233


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        85 ~~idilvnnAG~   96 (259)
T d2ae2a_          85 GKLNILVNNAGI   96 (259)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCceEEEECCce
Confidence            479999999885

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.54  E-value=0.00016  Score=61.66  Aligned_cols=79  Identities=22%  Similarity=0.260  Sum_probs=57.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-hCCCceE-eCCCCCCccHHHHHHHHh--cCCccEE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEF-LNPNDNNEPVQQVIKRIT--DGGADYS  267 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~~G~~~~-~~~~~~~~~~~~~~~~~~--~~~~dvv  267 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. ++++..+ .|..+ ..+..+.+.+..  -+++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHhcCCceEE
Confidence            5899999997 8999999999999999 9999999999887764 4665543 23321 233333333322  2479999


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      ++++|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999885

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.51  E-value=0.00023  Score=57.04  Aligned_cols=73  Identities=16%  Similarity=0.201  Sum_probs=56.6

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCc
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      .+..++.++++|||+|+|+.+.+++..++..|+++|.++.|+.++.+.+.+ ++...+....              ...+
T Consensus         9 l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~~--------------~~~~   74 (167)
T d1npya1           9 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSLE--------------NQQA   74 (167)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCCT--------------TCCC
T ss_pred             HHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhccc--------------ccch
Confidence            355667788999999999999999999999999899999999998877644 5543322111              1258


Q ss_pred             cEEEeccC
Q 018627          265 DYSFECIG  272 (353)
Q Consensus       265 dvv~d~~g  272 (353)
                      |++++|++
T Consensus        75 DliINaTp   82 (167)
T d1npya1          75 DILVNVTS   82 (167)
T ss_dssp             SEEEECSS
T ss_pred             hhheeccc
Confidence            99999876

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.51  E-value=0.00028  Score=60.12  Aligned_cols=79  Identities=14%  Similarity=0.103  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++....+..+-.+.+-.+.+.+.. +++|+++++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~-g~iDilVnn   81 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI-GPVDLLVNN   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc-CCCeEEEEC
Confidence            6899999997 8999999999999999 999999999887665 44543333222211232222222222 489999999


Q ss_pred             cCC
Q 018627          271 IGD  273 (353)
Q Consensus       271 ~g~  273 (353)
                      +|.
T Consensus        82 Ag~   84 (242)
T d1cyda_          82 AAL   84 (242)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.51  E-value=0.00034  Score=60.22  Aligned_cols=79  Identities=16%  Similarity=0.208  Sum_probs=55.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHH---HHHhc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVI---KRITD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~---~~~~~  261 (353)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.+....   .|..+ ..+..+.+   .+..+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHHHhC
Confidence            6899999997 8999999999999999 999999999887655    23333221   23321 22333333   33334


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|++++++|.
T Consensus        85 g~idilvnnAG~   96 (259)
T d1xq1a_          85 GKLDILINNLGA   96 (259)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCcccccccccc
Confidence            579999999985

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.47  E-value=0.00012  Score=61.25  Aligned_cols=102  Identities=21%  Similarity=0.233  Sum_probs=70.6

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~  259 (353)
                      +.+.+++++|++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++    .+...+....   .+..+.  ..
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~---~d~~~~--~~  140 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC---GDGYYG--VP  140 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGC--CG
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhccccccccc---CchHHc--cc
Confidence            34778899999999999864 7888888887753 389999999988777644    4544432111   010000  01


Q ss_pred             hcCCccEEEeccCChHHHHHHHHHhccCCceEEE
Q 018627          260 TDGGADYSFECIGDTGMITTALQSCCDGWGLAVT  293 (353)
Q Consensus       260 ~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~  293 (353)
                      ..+.||+|+.+.+-....+..++.|+++ |+++.
T Consensus       141 ~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~  173 (213)
T d1dl5a1         141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIV  173 (213)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEE
T ss_pred             cccchhhhhhhccHHHhHHHHHHhcCCC-cEEEE
Confidence            1237999998776555557788999997 99987

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.47  E-value=0.00035  Score=59.79  Aligned_cols=79  Identities=18%  Similarity=0.326  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .++.+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|....   .|.. ++.+..+.+.+..  .+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt-~~~~v~~~~~~~~~~~g   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS-KKEEISEVINKILTEHK   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTT-CHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-CHHHHHHHHHHHHHhcC
Confidence            4788999988 8999999999999999 999999999887654    44554332   2332 1233333333321  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|+++++.|.
T Consensus        87 ~iDilvnnag~   97 (251)
T d2c07a1          87 NVDILVNNAGI   97 (251)
T ss_dssp             CCCEEEECCCC
T ss_pred             Cceeeeecccc
Confidence            89999998875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.44  E-value=0.00059  Score=57.95  Aligned_cols=105  Identities=18%  Similarity=0.203  Sum_probs=71.8

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE---eCCCCCCccHHHHHHHHhc--CCc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRITD--GGA  264 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~---~~~~~~~~~~~~~~~~~~~--~~~  264 (353)
                      -.|+++||+|+ +++|.+.++-+...|+ +|+.+++++++++.+ ++++....   .|.. ++++..+.+.+...  +++
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls-~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVS-DPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTT-SHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCC-CHHHHHHHHHHHHHHhCCc
Confidence            36899999998 8999999999999999 999999999887655 55775442   2333 13344444443322  479


Q ss_pred             cEEEeccCCh-------------------------HHHHHHHHHhccCCceEEEEcCCCC
Q 018627          265 DYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       265 dvv~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      |++++++|..                         ......+..+..+ +.++.++....
T Consensus        81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~a~  139 (241)
T d2a4ka1          81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSVAG  139 (241)
T ss_dssp             CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCCTT
T ss_pred             cEeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeecccccc
Confidence            9999988742                         1233445567775 77777765444

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=0.00058  Score=58.61  Aligned_cols=80  Identities=19%  Similarity=0.356  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCc-eE----eCCCCCCccHHHHHHHHh-
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-EF----LNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~-~~----~~~~~~~~~~~~~~~~~~-  260 (353)
                      -+|+.+||+|+ +++|.+.+..+...|+ +|+.+++++++++.+    ++.+.. .+    .|..+ +++..+.+.+.. 
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~v~~~~~   85 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRS   85 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC-HHHHHHHHHHHHH
Confidence            36899999998 8999999999999999 999999999887754    334422 22    23331 333333333332 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++++++|.
T Consensus        86 ~~g~iD~lVnnAg~   99 (257)
T d1xg5a_          86 QHSGVDICINNAGL   99 (257)
T ss_dssp             HHCCCSEEEECCCC
T ss_pred             hcCCCCEEEecccc
Confidence             2479999999986

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=0.00022  Score=60.83  Aligned_cols=80  Identities=15%  Similarity=0.183  Sum_probs=58.7

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+++++++++++.+.+.........+....+..+...+.. +.+|+++++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~id~lVn~   81 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNV   81 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEEC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc-ccceeEEec
Confidence            36899999987 8999999999999999 99999999998887766443333222222344444444432 379999999


Q ss_pred             cCC
Q 018627          271 IGD  273 (353)
Q Consensus       271 ~g~  273 (353)
                      .|.
T Consensus        82 ag~   84 (245)
T d2ag5a1          82 AGF   84 (245)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            885

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=0.00029  Score=60.95  Aligned_cols=81  Identities=15%  Similarity=0.154  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCceE-eCCCCCCccHHHHHH-HH--hc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVTEF-LNPNDNNEPVQQVIK-RI--TD  261 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~~~-~~~~~~~~~~~~~~~-~~--~~  261 (353)
                      -+|+++||+|+ +++|++.+..+...|+ +|+.+++++++++.+.+     .+.... +..........+.+. ..  ..
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            47899999998 8999999999999999 99999999998876532     333322 211111222222222 21  23


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +..|+++++.|.
T Consensus        91 g~~~~li~nag~  102 (269)
T d1xu9a_          91 GGLDMLILNHIT  102 (269)
T ss_dssp             TSCSEEEECCCC
T ss_pred             CCcccccccccc
Confidence            478999887764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00058  Score=58.44  Aligned_cols=104  Identities=17%  Similarity=0.235  Sum_probs=67.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-C----CCceE----eCCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTEF----LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~----G~~~~----~~~~~~~~~~~~~~~~~~--  260 (353)
                      .|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ +    +...+    .|..+ ..++.+.+....  
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC-HHHHHHHHHHHHHH
Confidence            5899999998 8999999999999999 99999999988765532 2    11111    23321 233333333332  


Q ss_pred             cCCccEEEeccCCh-----------------HHHHHHHHHhccC----CceEEEEcCCC
Q 018627          261 DGGADYSFECIGDT-----------------GMITTALQSCCDG----WGLAVTLGVPK  298 (353)
Q Consensus       261 ~~~~dvv~d~~g~~-----------------~~~~~~~~~l~~~----~G~~v~~g~~~  298 (353)
                      -+++|++++++|..                 .....++..|.+.    .|++|.+++..
T Consensus        80 ~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~  138 (254)
T d2gdza1          80 FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLA  138 (254)
T ss_dssp             HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGG
T ss_pred             cCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHh
Confidence            24899999999852                 1223344445431    27899998643

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.35  E-value=0.0009  Score=56.96  Aligned_cols=79  Identities=22%  Similarity=0.224  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh--HHHHHhCCCceE---eCCCCCCccHHHHHHHHh--cCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~--~~~~~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      +|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++  .+.+++.|....   .|..+ ..+..+.+.+..  -+++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcCCC
Confidence            5899999987 8999999999999999 89988887643  344566775442   23321 233333333322  2489


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++++++|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.32  E-value=0.00039  Score=59.76  Aligned_cols=79  Identities=18%  Similarity=0.282  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHH---HHHHHHhc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQ---QVIKRITD  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~---~~~~~~~~  261 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.+....   .|..+ ..+..   +.+.+..+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD   82 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC-HHHHHHHHHHHHHHhC
Confidence            7899999997 8999999999999999 999999999776644    44554442   23321 22222   23334445


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +.+|++++++|.
T Consensus        83 g~idilinnag~   94 (258)
T d1ae1a_          83 GKLNILVNNAGV   94 (258)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCcEEEeccccc
Confidence            579999998885

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.31  E-value=0.00029  Score=60.08  Aligned_cols=80  Identities=16%  Similarity=0.160  Sum_probs=56.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE---eCCCCCCccHHHHHHHHh--cCCc
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      -.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++....   .|..+ ..+..+.+.+..  .+++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC-HHHHHHHHHHHHHHhCCC
Confidence            36899999998 8999999999999999 999999999888766 44543322   23321 233333333332  2479


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |++++++|.
T Consensus        82 dilinnAG~   90 (244)
T d1nffa_          82 HVLVNNAGI   90 (244)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999985

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.31  E-value=0.00068  Score=58.56  Aligned_cols=102  Identities=21%  Similarity=0.213  Sum_probs=68.7

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC-hhhHH----HHHhCCCceEe---CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCE----KAKAFGVTEFL---NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~-~~~~~----~~~~~G~~~~~---~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++ ++.++    .+++.|.+...   |.. +..++.+.+.+..  .
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVG-VVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-CHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCC-CHHHHHHHHHHHHHHh
Confidence            5899999997 8999999999999999 88887665 44433    34556655432   222 1334444444332  2


Q ss_pred             CCccEEEeccCCh-------------------------HHHHHHHHHhccCCceEEEEcCC
Q 018627          262 GGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       262 ~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +++|+++++.|..                         ...+.++..|.++ |+++.++..
T Consensus        95 g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~  154 (272)
T d1g0oa_          95 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  154 (272)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence            4899999988752                         2345566678886 888888753

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.29  E-value=0.00022  Score=61.27  Aligned_cols=79  Identities=22%  Similarity=0.298  Sum_probs=57.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE---eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      +|+++||+|+ +++|++.++.+...|+ +|+++++++++++.+ +++|....   .|..+ +.+..+.+.+..  .+++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD-QASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC-HHHHHHHHHHHHHHhCCcc
Confidence            5899999987 8999999999999999 999999998887755 55665442   23321 233333333322  24899


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999885

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.28  E-value=0.0012  Score=58.07  Aligned_cols=102  Identities=20%  Similarity=0.236  Sum_probs=66.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh---------hhHHH----HHhCCCceEeCCCCCCccHHHHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCEK----AKAFGVTEFLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~---------~~~~~----~~~~G~~~~~~~~~~~~~~~~~~~~  258 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|++.+++.         +.++.    .+..+.....+..+ ..+..+.+..
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch-HHHHHHHHHH
Confidence            5899999998 8999999999999999 899886543         22222    23344444444442 3344444443


Q ss_pred             Hh--cCCccEEEeccCCh-------------------------HHHHHHHHHhcc-CCceEEEEcC
Q 018627          259 IT--DGGADYSFECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGV  296 (353)
Q Consensus       259 ~~--~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~  296 (353)
                      ..  -+++|++++++|..                         ...+.++..|+. ++|++|.+++
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS  149 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  149 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence            22  34899999998852                         123444444532 2499999986

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.27  E-value=6.7e-05  Score=63.83  Aligned_cols=100  Identities=17%  Similarity=0.220  Sum_probs=63.5

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc----cHHHHHHHHhcC-CccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE----PVQQVIKRITDG-GADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~-~~dv  266 (353)
                      +|++|||+|+ +++|.+.++.+...|+ +|+.+++++.+..     .............    .+...+.+.... ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4899999998 8999999999999999 9998877665421     1111111111111    122222333333 7999


Q ss_pred             EEeccCCh--------------------------HHHHHHHHHhccCCceEEEEcCCCC
Q 018627          267 SFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       267 v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +++++|..                          .....++..++++ |++|.+++...
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~~  132 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKAA  132 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHHH
Confidence            99998741                          1223344567886 99999987443

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.24  E-value=0.0015  Score=55.70  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCC--c-eEe--CCCCCCccHHHHHHHHh--cCC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGV--T-EFL--NPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~--~-~~~--~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      .|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ ++.  . ..+  |..+ ..+..+.+.+..  -++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSD-EDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCC-HHHHHHHHHHHHHHhCC
Confidence            6899999987 8999999999999999 89999999988776643 321  1 122  3221 222222232221  248


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus        83 iDiLVnnAg~   92 (251)
T d1zk4a1          83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999999885

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.24  E-value=0.00028  Score=61.37  Aligned_cols=78  Identities=23%  Similarity=0.267  Sum_probs=55.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceE---eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .|+++||+|+ +++|.++++.+...|+ +|+.+++++++++.+ +++|....   .|..+ ..+..+.+.+..  -+.+|
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id   81 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS-LEDQKQAASRCVARFGKID   81 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc-HHHHHHHHHHHHHHhCCcc
Confidence            6899999987 8999999999999999 999999999987665 44554332   23321 223333333322  24899


Q ss_pred             EEEeccC
Q 018627          266 YSFECIG  272 (353)
Q Consensus       266 vv~d~~g  272 (353)
                      ++++++|
T Consensus        82 ilvnnAG   88 (276)
T d1bdba_          82 TLIPNAG   88 (276)
T ss_dssp             EEECCCC
T ss_pred             ccccccc
Confidence            9999987

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.23  E-value=0.00099  Score=54.32  Aligned_cols=76  Identities=21%  Similarity=0.269  Sum_probs=54.1

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----CCCc-eEeCCCCCCccHHHHHHHHhcCC
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----FGVT-EFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----~G~~-~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      --+|+++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+.+     .... ...+..    + .+.+.+.. +.
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~----~-~~~~~~~~-~~   92 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----D-DASRAEAV-KG   92 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----S-HHHHHHHT-TT
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhcc----c-HHHHHHHh-cC
Confidence            347999999997 9999999999999999 99999999988776533     1211 122222    1 22333333 36


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++|+++|.
T Consensus        93 iDilin~Ag~  102 (191)
T d1luaa1          93 AHFVFTAGAI  102 (191)
T ss_dssp             CSEEEECCCT
T ss_pred             cCeeeecCcc
Confidence            9999999874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.00035  Score=60.53  Aligned_cols=100  Identities=18%  Similarity=0.294  Sum_probs=63.5

Q ss_pred             CCCEE-EEEcC-ChHHHHHHHH-HHHCCCCeEEEEcCChhhHHHH----HhCCCce-Ee--CCCCCCccH---HHHHHHH
Q 018627          193 KGSTV-VIFGL-GTVGLSVAQG-AKARGASRIIGVDTNPEKCEKA----KAFGVTE-FL--NPNDNNEPV---QQVIKRI  259 (353)
Q Consensus       193 ~g~~v-LV~Ga-g~vG~~a~~l-a~~~g~~~vi~~~~~~~~~~~~----~~~G~~~-~~--~~~~~~~~~---~~~~~~~  259 (353)
                      .|++| ||+|+ +++|+++++. ++..|+ +|+.+++++++.+.+    ++.|... .+  |..+ ..+.   .+.+.+.
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~-~~sv~~~~~~~~~~   78 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD-LQSIRALRDFLRKE   78 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCC-HHHHHHHHHHHHHh
Confidence            37788 66787 8999998875 455588 999999999887654    3344332 22  3321 2222   2233332


Q ss_pred             hcCCccEEEeccCCh-------------------------HHHHHHHHHhccCCceEEEEcC
Q 018627          260 TDGGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       260 ~~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      . +++|++++++|..                         ...+.++..|++. |+++.+++
T Consensus        79 ~-g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS  138 (275)
T d1wmaa1          79 Y-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  138 (275)
T ss_dssp             H-SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             c-CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence            2 4799999999852                         1223344556785 99999976

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.20  E-value=0.00075  Score=57.86  Aligned_cols=103  Identities=18%  Similarity=0.302  Sum_probs=68.2

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHH----HHHhCCCceE-e--CCCCCCccHHHHHHHHh-
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCE----KAKAFGVTEF-L--NPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~----~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~-  260 (353)
                      .-.|+++||+|+ +++|.+.++.+...|+ +|+.+ .++++..+    .+++.|...+ +  |.. +..+..+.+.+.. 
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~-~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS-KPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-SHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCC-CHHHHHHHHHHHHH
Confidence            346999999987 8999999999999999 77664 56655544    3455676543 2  222 1233333333322 


Q ss_pred             -cCCccEEEeccCCh-------------------------HHHHHHHHHhccCCceEEEEcC
Q 018627          261 -DGGADYSFECIGDT-------------------------GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       261 -~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                       .+++|++++++|..                         ...+.++..++++ |+++.+..
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s  141 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS  141 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence             23799999999862                         2345666778886 88877754

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.19  E-value=0.001  Score=57.03  Aligned_cols=79  Identities=25%  Similarity=0.352  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh-hhHHHH-----HhCCCceEe---CCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKA-----KAFGVTEFL---NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~-~~~~~~-----~~~G~~~~~---~~~~~~~~~~~~~~~~~--  260 (353)
                      +|+.+||+|+ +++|++.++.+...|+ +|+.+++++ ++++.+     ++.|.....   |..+ ..+..+.+.+..  
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSK-GEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTS-HHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHH
Confidence            6899999987 8999999999999999 999998864 444332     234543322   2221 233333333222  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++++++|.
T Consensus        81 ~G~iDiLVnnAG~   93 (260)
T d1x1ta1          81 MGRIDILVNNAGI   93 (260)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             hCCCcEEEeeccc
Confidence            2479999999885

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00038  Score=59.71  Aligned_cols=79  Identities=18%  Similarity=0.297  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|.... +  |.. ++.+..+.+.+..  -+
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs-~~~~~~~~~~~~~~~~g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDIT-SEQELSALADFAISKLG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-CHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCC-CHHHHHHHHHHHHHHcC
Confidence            6899999997 8999999999999999 999999998876654    44564432 2  222 1223333333221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus        88 ~iDilvnnAG~   98 (255)
T d1fmca_          88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEeeeCCcC
Confidence            79999999885

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.15  E-value=0.0012  Score=56.43  Aligned_cols=80  Identities=20%  Similarity=0.356  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hCCCceEeCCCCC-CccHHHHHHHHh--cC
Q 018627          193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDN-NEPVQQVIKRIT--DG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~-~~~~~~~~~~~~--~~  262 (353)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++    +.+....+..+-. ..+..+.+....  -+
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            6899999997 5  799999999999999 8988888877655443    2343333322211 222322232221  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus        86 ~iDilVnnag~   96 (256)
T d1ulua_          86 GLDYLVHAIAF   96 (256)
T ss_dssp             SEEEEEECCCC
T ss_pred             CceEEEecccc
Confidence            79999998874

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.0015  Score=51.62  Aligned_cols=102  Identities=19%  Similarity=0.285  Sum_probs=74.4

Q ss_pred             HHHHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhc
Q 018627          183 GAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       183 ~al~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      .++.+..+ .-.|++++|.|-|-+|...++.++.+|+ +|++++.++-+.-.+.--|.. +.       .+.+.+     
T Consensus        12 ~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~-------~~~~a~-----   77 (163)
T d1li4a1          12 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT-------TMDEAC-----   77 (163)
T ss_dssp             HHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHHHT-----
T ss_pred             HHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee-------ehhhhh-----
Confidence            34445444 4589999999999999999999999999 999999988765454444533 21       122222     


Q ss_pred             CCccEEEeccCChH-HHHHHHHHhccCCceEEEEcCCCC
Q 018627          262 GGADYSFECIGDTG-MITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       262 ~~~dvv~d~~g~~~-~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      ...|+++-++|... .-.+.++.|+++ ..+..+|....
T Consensus        78 ~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghfd~  115 (163)
T d1li4a1          78 QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHFDV  115 (163)
T ss_dssp             TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSSTT
T ss_pred             hhccEEEecCCCccchhHHHHHhccCC-eEEEEeccccc
Confidence            24799999999743 447778999996 78888886554

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.12  E-value=0.00049  Score=57.80  Aligned_cols=99  Identities=15%  Similarity=0.203  Sum_probs=67.9

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC--CCce--EeCCCCCCccHHHHHHHHh
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF--GVTE--FLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~--G~~~--~~~~~~~~~~~~~~~~~~~  260 (353)
                      +.+..++++|++||-+|+| .|..++.+++. +. +|++++.+++..+.+++.  ....  ++..+ ....+      ..
T Consensus        62 ml~~L~l~~g~~VLdIG~G-sGy~ta~La~l-~~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d-~~~g~------~~  131 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTG-IGYYTALIAEI-VD-KVVSVEINEKMYNYASKLLSYYNNIKLILGD-GTLGY------EE  131 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHTTCSSEEEEESC-GGGCC------GG
T ss_pred             HHHHhhhcccceEEEecCC-CCHHHHHHHHH-hc-ccccccccHHHHHHHHHHHhcccccccccCc-hhhcc------hh
Confidence            3467899999999999986 56777777775 44 899999999988887662  1111  22111 00001      11


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627          261 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .++||+|+-+.+.+......+++|+++ |++|..
T Consensus       132 ~~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         132 EKPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             GCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            247999987766556667788999997 998875

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.08  E-value=0.0037  Score=46.11  Aligned_cols=95  Identities=12%  Similarity=0.040  Sum_probs=63.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh--hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP--EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~--~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .|++|||+|+|.+|..-++.+...|+ +|++++...  +..+++++ +-...+.....+.++         .++++|+-+
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~-~~i~~~~~~~~~~dl---------~~~~lv~~a   79 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANE-GMLTLVEGPFDETLL---------DSCWLAIAA   79 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTT-TSCEEEESSCCGGGG---------TTCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhc-CCceeeccCCCHHHh---------CCCcEEeec
Confidence            58899999999999999999999999 777764433  22333333 322222211112221         268999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      .+....-....+..++. |.+|.+...+.
T Consensus        80 t~d~~~n~~i~~~a~~~-~ilVNv~D~p~  107 (113)
T d1pjqa1          80 TDDDTVNQRVSDAAESR-RIFCNVVDAPK  107 (113)
T ss_dssp             CSCHHHHHHHHHHHHHT-TCEEEETTCTT
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEeCCChh
Confidence            88865555666788886 99998865544

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.08  E-value=0.001  Score=58.10  Aligned_cols=101  Identities=13%  Similarity=0.136  Sum_probs=69.2

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHh
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      +.+.+++++|++||=+|+| .|..+..+|+..|+ +|++++.++++.+.+    ++.|....+...  ..++     ...
T Consensus        53 ~~~~l~l~~G~~VLDiGCG-~G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~--~~d~-----~~~  123 (291)
T d1kpia_          53 ALDKLNLEPGMTLLDIGCG-WGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVR--IQGW-----EEF  123 (291)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEE--ECCG-----GGC
T ss_pred             HHHhcCCCCCCEEEEecCc-chHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhh--hhcc-----ccc
Confidence            4578899999999999986 45566788888899 999999999986655    335544322111  0111     122


Q ss_pred             cCCccEEEe-----ccCC----------hHHHHHHHHHhccCCceEEEEc
Q 018627          261 DGGADYSFE-----CIGD----------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       261 ~~~~dvv~d-----~~g~----------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ++.||.|+.     .++.          ...+....+.|+|+ |++++-.
T Consensus       124 ~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~  172 (291)
T d1kpia_         124 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHT  172 (291)
T ss_dssp             CCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEE
T ss_pred             ccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEE
Confidence            458998875     3322          24577788899997 9988643

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.07  E-value=0.0022  Score=51.19  Aligned_cols=78  Identities=12%  Similarity=0.141  Sum_probs=54.6

Q ss_pred             HHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC---CceEeCCCCCCccHHHHHHHH
Q 018627          184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG---VTEFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       184 al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G---~~~~~~~~~~~~~~~~~~~~~  259 (353)
                      +|.+..-..+|++|||+|+|+.+.+++..+..+|+ +|+.+.|+.++.+.+.+ +.   ....+...           +.
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~-----------~~   75 (170)
T d1nyta1           8 DLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMD-----------EL   75 (170)
T ss_dssp             HHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSG-----------GG
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcccccccccc-----------cc
Confidence            34333334578999999999999999999999999 79999999998776644 32   11122111           11


Q ss_pred             hcCCccEEEeccCC
Q 018627          260 TDGGADYSFECIGD  273 (353)
Q Consensus       260 ~~~~~dvv~d~~g~  273 (353)
                      ....+|++++|++.
T Consensus        76 ~~~~~dliIN~Tp~   89 (170)
T d1nyta1          76 EGHEFDLIINATSS   89 (170)
T ss_dssp             TTCCCSEEEECCSC
T ss_pred             cccccceeeccccc
Confidence            12368999999864

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.05  E-value=0.0024  Score=50.71  Aligned_cols=99  Identities=15%  Similarity=-0.002  Sum_probs=64.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+++|||+|+|.+|..+++.+...|. .|++++++.++.+.+.+-.......... ..... ..... -...|.++.+..
T Consensus         1 ~~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~-~~~~~-~~~~~-i~~~~~~i~~~~   76 (182)
T d1e5qa1           1 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLD-VNDDA-ALDAE-VAKHDLVISLIP   76 (182)
T ss_dssp             CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECC-TTCHH-HHHHH-HTTSSEEEECSC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhccccccccccc-ccchh-hhHhh-hhccceeEeecc
Confidence            36899999999999999999999999 8999999999998886633222222211 11111 11111 125788888776


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcC
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ..........+...+ ..++.+..
T Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~~~   99 (182)
T d1e5qa1          77 YTFHATVIKSAIRQK-KHVVTTSY   99 (182)
T ss_dssp             GGGHHHHHHHHHHHT-CEEECSSC
T ss_pred             chhhhHHHHHHHhhc-cceeeccc
Confidence            655445555566664 66666543

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.05  E-value=0.0013  Score=56.51  Aligned_cols=80  Identities=23%  Similarity=0.366  Sum_probs=55.9

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC---CceEe--CCCCCCccHHHHHHHHh--cC
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG---VTEFL--NPNDNNEPVQQVIKRIT--DG  262 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G---~~~~~--~~~~~~~~~~~~~~~~~--~~  262 (353)
                      -.|+.+||+|+ +++|++.++.+...|+ +|+.+++++++++.+.+ ++   ....+  |..+ ..+..+.+.+..  .+
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence            37899999997 8999999999999999 99999999988776633 32   22222  3321 233333333322  24


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      .+|++++++|.
T Consensus        82 ~iD~lVnnAG~   92 (268)
T d2bgka1          82 KLDIMFGNVGV   92 (268)
T ss_dssp             CCCEEEECCCC
T ss_pred             Ccceecccccc
Confidence            89999999873

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.05  E-value=0.00049  Score=57.84  Aligned_cols=97  Identities=16%  Similarity=0.152  Sum_probs=65.0

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CCCc-----eE-eCCCCCCccHHHHHHH
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVT-----EF-LNPNDNNEPVQQVIKR  258 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G~~-----~~-~~~~~~~~~~~~~~~~  258 (353)
                      ++++|++||-+|+| .|..++.+|+..|. .+|++++.+++-.+.+++    .+..     .+ +...    +....  .
T Consensus        73 ~l~~g~~VLdiG~G-sGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~g----D~~~~--~  145 (224)
T d1i1na_          73 QLHEGAKALDVGSG-SGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG----DGRMG--Y  145 (224)
T ss_dssp             TSCTTCEEEEETCT-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES----CGGGC--C
T ss_pred             ccCCCCeEEEecCC-CCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEe----ecccc--c
Confidence            78999999999986 57777788877652 389999999987776633    2221     11 1011    00000  0


Q ss_pred             HhcCCccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627          259 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       259 ~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ...+.||+|+-+...+...+..++.|+++ |++|..
T Consensus       146 ~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             chhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            01237999998776656667888999997 999874

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.04  E-value=0.00096  Score=57.10  Aligned_cols=78  Identities=15%  Similarity=0.260  Sum_probs=54.6

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--cCC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGG  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~  263 (353)
                      |+.+||+|+ +++|++.++.+...|+ +|+.+++++++++.+    ++.|....   .|..+ ..+..+.+.+..  -++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence            677899987 8999999999999999 899999998876654    44564432   23321 233333333322  247


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999885

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.01  E-value=0.00034  Score=59.80  Aligned_cols=102  Identities=16%  Similarity=0.133  Sum_probs=67.8

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CC-CceEeCCCCCCccHHHHHHHHh
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FG-VTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G-~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      ..+++++|++||=.|+| .|.++..+|++.+. .+|++++.+++..+.+++    ++ ...+....   .++.+.   ..
T Consensus        79 ~~l~i~pG~rVLEiG~G-sG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~---~Di~~~---~~  151 (250)
T d1yb2a1          79 MRCGLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR---SDIADF---IS  151 (250)
T ss_dssp             --CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC---SCTTTC---CC
T ss_pred             HHcCCCCcCEEEEeeee-CcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE---eeeecc---cc
Confidence            56889999999999875 36666777777643 389999999998888754    33 22221111   111111   12


Q ss_pred             cCCccEEEeccCC-hHHHHHHHHHhccCCceEEEEcC
Q 018627          261 DGGADYSFECIGD-TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       261 ~~~~dvv~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+.||.||-.... ...++.+.+.|+|+ |+++.+..
T Consensus       152 ~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~P  187 (250)
T d1yb2a1         152 DQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  187 (250)
T ss_dssp             SCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             cceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEeC
Confidence            2379988755554 35678899999997 99998754

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.98  E-value=0.00047  Score=58.94  Aligned_cols=75  Identities=12%  Similarity=0.094  Sum_probs=51.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC----CCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      ++||+|+ +++|++.+..+...|+ +|++.+++.++++.+++.    ....+.+..+ ...+.+.+.+.. +++|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~-~~~~~~~~~~~~-G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE-PAELIEAVTSAY-GQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS-HHHHHHHHHHHH-SCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH-HHHHHHHHHHHc-CCCCEEEEC
Confidence            6899998 8899999999999999 999999988887776543    2233333221 122333333332 479999988


Q ss_pred             cCC
Q 018627          271 IGD  273 (353)
Q Consensus       271 ~g~  273 (353)
                      +|.
T Consensus        79 Ag~   81 (252)
T d1zmta1          79 DIF   81 (252)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            763

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.98  E-value=0.0012  Score=56.51  Aligned_cols=79  Identities=27%  Similarity=0.270  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----C--CCceE---eCCCCCCccHHHHHHHHh--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVTEF---LNPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~--G~~~~---~~~~~~~~~~~~~~~~~~--  260 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+    .  +...+   .|..+ ..+..+.+.+..  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC-HHHHHHHHHHHHHH
Confidence            5889999987 8999999999999999 99999999988765422    1  22221   23331 233333333322  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+++|++++++|.
T Consensus        81 ~G~iDiLVnnAG~   93 (258)
T d1iy8a_          81 FGRIDGFFNNAGI   93 (258)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             hCCCCEEEECCcc
Confidence            2479999999873

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.98  E-value=0.00011  Score=62.24  Aligned_cols=98  Identities=17%  Similarity=0.226  Sum_probs=61.2

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCcc----HHHHHHHH-hcCCccEE
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP----VQQVIKRI-TDGGADYS  267 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~----~~~~~~~~-~~~~~dvv  267 (353)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.++++++....     ....+.......+    ..+.+... ..+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            356899998 8999999999999999 99999888754211     1111111110111    11122222 23489999


Q ss_pred             EeccCCh--------------------------HHHHHHHHHhccCCceEEEEcCCC
Q 018627          268 FECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       268 ~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ++++|..                          ......+..++++ |+++.++...
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~~  131 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAAA  131 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccHH
Confidence            9998741                          1223445567886 9999998643

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.97  E-value=0.00094  Score=58.21  Aligned_cols=80  Identities=13%  Similarity=0.167  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-----HhCCCce-EeCCCCCC-ccHHHHHHHH--hcC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-----KAFGVTE-FLNPNDNN-EPVQQVIKRI--TDG  262 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-----~~~G~~~-~~~~~~~~-~~~~~~~~~~--~~~  262 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+     ++.|... .+..+-.+ .+....+...  ..+
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5899999997 8999999999999999 999999998876543     2334433 22221112 2222222222  234


Q ss_pred             CccEEEeccCC
Q 018627          263 GADYSFECIGD  273 (353)
Q Consensus       263 ~~dvv~d~~g~  273 (353)
                      ++|++++++|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            89999999885

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.95  E-value=0.001  Score=57.41  Aligned_cols=79  Identities=22%  Similarity=0.257  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCc--eE----eCCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT--EF----LNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~--~~----~~~~~~~~~~~~~~~~~~-  260 (353)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.+..  .+    .|..+ ..+..+.+.+.. 
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~   81 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK   81 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC-HHHHHHHHHHHHH
Confidence            5899999987 8999999999999999 999999999887655    334432  11    23321 233333333322 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++++++|.
T Consensus        82 ~~g~iDilvnnAG~   95 (272)
T d1xkqa_          82 QFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCceEEEeCCcc
Confidence             2489999999874

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.94  E-value=0.00083  Score=57.72  Aligned_cols=79  Identities=20%  Similarity=0.215  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh-hHH----HHHhCCCceEe---CCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVTEFL---NPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~-~~~----~~~~~G~~~~~---~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+.+||+|+ +++|.+.++.+...|+ +|++++++.+ +++    .+++.|.....   |..+ +.+..+.+.+..  .
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            6899999987 8999999999999999 8988887743 333    34556654322   3321 233333333322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        84 G~iDiLVnnAG~   95 (261)
T d1geea_          84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEeecccee
Confidence            489999999885

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.94  E-value=0.00063  Score=58.42  Aligned_cols=79  Identities=20%  Similarity=0.295  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-----HhCCCceE---eCCCCCCccHHHHHHHHh--c
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-----KAFGVTEF---LNPNDNNEPVQQVIKRIT--D  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~  261 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+     ++.|....   .|..+ .++..+.+.+..  -
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence            5899999998 8999999999999999 899999988765433     33454432   23321 233333333322  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        86 g~iDilVnnAg~   97 (260)
T d1h5qa_          86 GPISGLIANAGV   97 (260)
T ss_dssp             CSEEEEEECCCC
T ss_pred             CCCcEecccccc
Confidence            489999999874

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.92  E-value=0.0017  Score=56.44  Aligned_cols=100  Identities=12%  Similarity=0.120  Sum_probs=68.6

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      +.+.+++++|++||-+|+| .|..++.+|+..|+ +|+++..++++.+.+++    .|...-+...  ..++     ...
T Consensus        54 ~~~~l~l~~G~~VLDiGCG-~G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~--~~d~-----~~~  124 (285)
T d1kpga_          54 ALGKLGLQPGMTLLDVGCG-WGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVL--LAGW-----EQF  124 (285)
T ss_dssp             HHTTTTCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEE--ESCG-----GGC
T ss_pred             HHHHcCCCCCCEEEEecCc-chHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHH--Hhhh-----hcc
Confidence            4577899999999999986 56777788999999 99999999998887744    3322211111  0111     112


Q ss_pred             cCCccEEEe-----ccCC---hHHHHHHHHHhccCCceEEEE
Q 018627          261 DGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       261 ~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ++.||.|+.     .++.   ...+....+.|+|+ |++++-
T Consensus       125 ~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~  165 (285)
T d1kpga_         125 DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLH  165 (285)
T ss_dssp             CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEE
T ss_pred             cccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEE
Confidence            357898775     3332   24567777899997 998863

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.00032  Score=59.57  Aligned_cols=100  Identities=22%  Similarity=0.276  Sum_probs=68.6

Q ss_pred             HHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce---EeCCCCCCccHHHHH
Q 018627          184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVI  256 (353)
Q Consensus       184 al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~---~~~~~~~~~~~~~~~  256 (353)
                      .|.+..++++|++||=+|+| .|..+..+++..|+ +|++++.+++..+.+++    .|...   ++..+  ..++    
T Consensus        24 ~l~~~~~l~pg~~VLDiGCG-~G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d--~~~~----   95 (245)
T d1nkva_          24 TLGRVLRMKPGTRILDLGSG-SGEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--AAGY----   95 (245)
T ss_dssp             HHHHHTCCCTTCEEEEETCT-TCHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--CTTC----
T ss_pred             HHHHHcCCCCCCEEEEEcCC-CCHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH--Hhhc----
Confidence            35577899999999999985 45667778888898 99999999988776644    45432   22111  1110    


Q ss_pred             HHHhcCCccEEEecc------CChHHHHHHHHHhccCCceEEEE
Q 018627          257 KRITDGGADYSFECI------GDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       257 ~~~~~~~~dvv~d~~------g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                        ..++.||+|+..-      .-...+....+.|+|+ |+++..
T Consensus        96 --~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~  136 (245)
T d1nkva_          96 --VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIG  136 (245)
T ss_dssp             --CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEE
T ss_pred             --cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEE
Confidence              1234899888531      1245677778899997 998875

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.91  E-value=0.0022  Score=51.79  Aligned_cols=98  Identities=16%  Similarity=0.156  Sum_probs=61.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH----hC----CCc-eEeCCCCCCccHHHHHHHHhcC
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AF----GVT-EFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~----~~----G~~-~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      -.+++|||+|+|+.+.+++..+...|+++++.+.|+.++.+.+.    ++    ... ...+..+ ...+.+.+.     
T Consensus        16 l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----   89 (182)
T d1vi2a1          16 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLAD-QQAFAEALA-----   89 (182)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC-HHHHHHHHH-----
T ss_pred             cCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeeccc-ccchhhhhc-----
Confidence            36799999999999999999999999989999999877655432    22    211 1222221 122222222     


Q ss_pred             CccEEEeccCChH------HHHHHHHHhccCCceEEEEcC
Q 018627          263 GADYSFECIGDTG------MITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       263 ~~dvv~d~~g~~~------~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+|++++|++...      .+..-+..++++ ..++++-.
T Consensus        90 ~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~-~~v~Di~Y  128 (182)
T d1vi2a1          90 SADILTNGTKVGMKPLENESLVNDISLLHPG-LLVTECVY  128 (182)
T ss_dssp             TCSEEEECSSTTSTTSCSCCSCCCGGGSCTT-CEEEECCC
T ss_pred             ccceeccccCCccccccchhhhhHHHhhhcc-hhhHHhhc
Confidence            4899999986311      000112456665 77777743

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.90  E-value=0.0011  Score=56.39  Aligned_cols=79  Identities=19%  Similarity=0.239  Sum_probs=54.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHhCCCce--Ee--CCCCCCcc---HHHHHHHHhcC-C
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTE--FL--NPNDNNEP---VQQVIKRITDG-G  263 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~G~~~--~~--~~~~~~~~---~~~~~~~~~~~-~  263 (353)
                      .++|||+|+ +++|+++++.+...|+. +|+++.+++++++.+++.....  ++  |..+ ..+   +.+.+.+..+. +
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC-HHHHHHHHHHHHHHhCCCC
Confidence            478999998 89999999988888863 7888899999988887753322  22  3321 222   23333333344 6


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|++++++|.
T Consensus        82 idilinnAG~   91 (250)
T d1yo6a1          82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             eEEEEEcCcc
Confidence            9999999984

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.0016  Score=56.99  Aligned_cols=81  Identities=15%  Similarity=0.251  Sum_probs=55.2

Q ss_pred             CCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH-h----C----CCceE---eCCCCCCccHHHHHH
Q 018627          191 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A----F----GVTEF---LNPNDNNEPVQQVIK  257 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~-~----~----G~~~~---~~~~~~~~~~~~~~~  257 (353)
                      .-.|+.+||+|+ +++|.+.++.+...|+ +|+++++++++++.+. +    +    +...+   .|..+ ..+..+.+.
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~   86 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVK   86 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC-HHHHHHHHH
Confidence            457899999987 8999999999999999 9999999988766442 1    1    22221   13221 233333333


Q ss_pred             HHh--cCCccEEEeccCC
Q 018627          258 RIT--DGGADYSFECIGD  273 (353)
Q Consensus       258 ~~~--~~~~dvv~d~~g~  273 (353)
                      +..  .+++|++++++|.
T Consensus        87 ~~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          87 STLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHhCCeEEEEeeccc
Confidence            322  2479999999885

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.88  E-value=0.00071  Score=57.92  Aligned_cols=80  Identities=14%  Similarity=0.140  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceE--e--CCCCCCccHHHHHHHHhc--
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--L--NPNDNNEPVQQVIKRITD--  261 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~--~--~~~~~~~~~~~~~~~~~~--  261 (353)
                      .|++|||+|+ +++|++++..+...|+ +|+++.++.++.+.+++    .+-..+  +  +...+..++.+.+.+...  
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            5899999987 8999999999999999 67666565555443322    332222  1  221111233333333322  


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +++|++++++|.
T Consensus        83 g~iDilvnnAG~   94 (254)
T d1sbya1          83 KTVDILINGAGI   94 (254)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEeCCCC
Confidence            489999999985

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.87  E-value=0.002  Score=54.39  Aligned_cols=75  Identities=16%  Similarity=0.223  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh--cCCccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT--DGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~--~~~~dvv~d  269 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+..    ...|..+ ..+..+.+.+..  .+++|++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~-~~~v~~~~~~~~~~~g~iDiLVn   79 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS   79 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCC-HHHHHHHHHHHHHhcCCceEEEe
Confidence            6899999998 8999999999999999 99999998776543211    1223321 233333333322  247999999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      ++|.
T Consensus        80 nAG~   83 (237)
T d1uzma1          80 NAGL   83 (237)
T ss_dssp             ECSC
T ss_pred             eecc
Confidence            9885

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.86  E-value=0.0019  Score=55.80  Aligned_cols=79  Identities=22%  Similarity=0.280  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCc--eE----eCCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT--EF----LNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~--~~----~~~~~~~~~~~~~~~~~~-  260 (353)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|..  .+    .|..+ ..+..+.+.+.. 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~   80 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA   80 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC-HHHHHHHHHHHHH
Confidence            5899999987 8999999999999999 999999999887654    334432  11    23321 233333333322 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+.+|++++++|.
T Consensus        81 ~~G~iDilVnnAG~   94 (274)
T d1xhla_          81 KFGKIDILVNNAGA   94 (274)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HcCCceEEEeeccc
Confidence             2489999999874

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.85  E-value=0.0034  Score=52.67  Aligned_cols=72  Identities=15%  Similarity=0.171  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe-CCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++   +.+...+. |..   ... +.+.+.. +.+|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l~---~~~~~~~~~Dv~---~~~-~~~~~~~-g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELLK---RSGHRYVVCDLR---KDL-DLLFEKV-KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHH---HTCSEEEECCTT---TCH-HHHHHHS-CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHH---hcCCcEEEcchH---HHH-HHHHHHh-CCCcEEEec
Confidence            5899999997 8999999999999999 9999999876644   44543332 222   223 3333322 479999999


Q ss_pred             cCC
Q 018627          271 IGD  273 (353)
Q Consensus       271 ~g~  273 (353)
                      +|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            875

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.83  E-value=0.0014  Score=56.26  Aligned_cols=79  Identities=18%  Similarity=0.227  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCc--eE----eCCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT--EF----LNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~--~~----~~~~~~~~~~~~~~~~~~-  260 (353)
                      .|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|..  .+    .|..+ ..+..+.+.+.. 
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~   81 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC-HHHHHHHHHHHHH
Confidence            6889999987 8999999999999999 999999999887655    334322  11    23321 233333333322 


Q ss_pred             -cCCccEEEeccCC
Q 018627          261 -DGGADYSFECIGD  273 (353)
Q Consensus       261 -~~~~dvv~d~~g~  273 (353)
                       -+++|++++++|.
T Consensus        82 ~~g~iDilvnnAG~   95 (264)
T d1spxa_          82 KFGKLDILVNNAGA   95 (264)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HhCCCCEeeccccc
Confidence             2489999999874

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.82  E-value=0.0033  Score=50.23  Aligned_cols=85  Identities=15%  Similarity=0.215  Sum_probs=58.2

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeC--------CCCCCccHHHHHHHHhcCCcc
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN--------PNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      .++|.|+|+|.+|++++..+...|. .|+++++++++.+.+++.+......        ......+..+.++     ..|
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~aD   74 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DAD   74 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHT-----TCS
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CCC
Confidence            3689999999999999999999999 9999999999999887765332210        0000112333332     489


Q ss_pred             EEEeccCChHHHHHHHHHhc
Q 018627          266 YSFECIGDTGMITTALQSCC  285 (353)
Q Consensus       266 vv~d~~g~~~~~~~~~~~l~  285 (353)
                      ++|-++... ..+..++.++
T Consensus        75 ~iii~v~~~-~~~~~~~~i~   93 (184)
T d1bg6a2          75 VILIVVPAI-HHASIAANIA   93 (184)
T ss_dssp             EEEECSCGG-GHHHHHHHHG
T ss_pred             EEEEEEchh-HHHHHHHHhh
Confidence            999998764 3444444333

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.81  E-value=0.0064  Score=51.70  Aligned_cols=97  Identities=22%  Similarity=0.325  Sum_probs=64.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      .++|++||=+|+|. |..++.++ .+|+ +|++++.+++-.+.+++    .|....+.    ..+..+   ....+.||+
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa-~~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~----~~d~~~---~~~~~~fD~  187 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFL----EGSLEA---ALPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEE----ESCHHH---HGGGCCEEE
T ss_pred             cCccCEEEEcccch-hHHHHHHH-hcCC-EEEEEECChHHHHHHHHHHHHcCCceeEE----eccccc---cccccccch
Confidence            67999999999852 55555444 4688 89999999998887754    44432221    122222   123458999


Q ss_pred             EEeccCCh---HHHHHHHHHhccCCceEEEEcCCC
Q 018627          267 SFECIGDT---GMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       267 v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      |+-+....   ..+....+.|+|+ |++++.|...
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgil~  221 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPG-GRALLTGILK  221 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEEG
T ss_pred             hhhccccccHHHHHHHHHHhcCCC-cEEEEEecch
Confidence            99765432   3345666889997 9999877543

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=96.79  E-value=0.0025  Score=54.77  Aligned_cols=104  Identities=20%  Similarity=0.265  Sum_probs=72.5

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~  259 (353)
                      +...+++++|++||=.|+| .|..++.+|+..+. .+|++++.+++..+.+++    +|....+...  ..+.    ...
T Consensus        95 Ii~~l~i~pG~~VLDiG~G-sG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~--~~d~----~~~  167 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVG-SGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIK--VRDI----SEG  167 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEE--CCCG----GGC
T ss_pred             HHHhhCCCCCCEEEECCCC-CCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEE--eccc----ccc
Confidence            3467899999999999886 37777788888753 389999999998887744    5653322111  1111    111


Q ss_pred             hcC-CccEEEeccCCh-HHHHHHHHHhccCCceEEEEcC
Q 018627          260 TDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       260 ~~~-~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+. .+|.||--+..+ ..++.+.+.|+|+ |+++.+..
T Consensus       168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~P  205 (266)
T d1o54a_         168 FDEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  205 (266)
T ss_dssp             CSCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             ccccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEeC
Confidence            223 788877766654 5689999999997 99998753

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.79  E-value=0.036  Score=43.22  Aligned_cols=43  Identities=35%  Similarity=0.598  Sum_probs=39.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV  239 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~  239 (353)
                      +|.|+|.|.+|...+..++..|. +|++.++++++.+.+++.|.
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~   44 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQL   44 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTS
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhc
Confidence            58899999999999998999999 99999999999999988885

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.76  E-value=0.0021  Score=54.76  Aligned_cols=76  Identities=17%  Similarity=0.227  Sum_probs=52.4

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceE---eCCCCCCccHHHHHHHHh--cCCcc
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF---LNPNDNNEPVQQVIKRIT--DGGAD  265 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~---~~~~~~~~~~~~~~~~~~--~~~~d  265 (353)
                      .+||+|+ +++|++.++.+...|+ +|+.+++++++++.+    ++.|....   .|..+ .++..+.+.+..  -+++|
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTCCC
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhCCcc
Confidence            3588987 8999999999999999 999999999887654    44564432   23321 233333333322  24899


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      ++++++|.
T Consensus        81 ilVnnAG~   88 (255)
T d1gega_          81 VIVNNAGV   88 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999875

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.76  E-value=0.0028  Score=50.98  Aligned_cols=99  Identities=9%  Similarity=0.041  Sum_probs=64.0

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC-CCc-----------------eEeCCCCC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVT-----------------EFLNPNDN  248 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~-G~~-----------------~~~~~~~~  248 (353)
                      ....+.+|++||..|+| .|..+..+|+. |+ +|+++|.|++-++.+++. +..                 .++.-+  
T Consensus        14 ~~l~~~~~~rvLd~GCG-~G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--   88 (201)
T d1pjza_          14 SSLNVVPGARVLVPLCG-KSQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD--   88 (201)
T ss_dssp             HHHCCCTTCEEEETTTC-CSHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC--
T ss_pred             HHcCCCCCCEEEEecCc-CCHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccc--
Confidence            44578999999999986 57777788864 98 999999999999988762 110                 000000  


Q ss_pred             CccHHHHHHHHhcCCccEEEeccCC--------hHHHHHHHHHhccCCceEEEEc
Q 018627          249 NEPVQQVIKRITDGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ..++....    ...+|+|++...-        ...+....+.|+++ |++++..
T Consensus        89 ~~~l~~~~----~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          89 FFALTARD----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             CSSSTHHH----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             cccccccc----ccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence            01111111    1268999885431        23456677889997 9876544

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.76  E-value=0.0044  Score=48.63  Aligned_cols=100  Identities=22%  Similarity=0.351  Sum_probs=73.9

Q ss_pred             HHHhcc-CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCC
Q 018627          185 AWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       185 l~~~~~-~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      +.+..+ +-.|++++|.|-|-+|.-.++-++.+|+ +|++++.++-+.-.+.--|+. +.       ...+.+     ..
T Consensus        13 i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~-------~~~~a~-----~~   78 (163)
T d1v8ba1          13 LMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV-------TLDEIV-----DK   78 (163)
T ss_dssp             HHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC-------CHHHHT-----TT
T ss_pred             HHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cC-------chhHcc-----cc
Confidence            334444 5689999999999999999999999999 999999998664444333432 22       122222     25


Q ss_pred             ccEEEeccCChHH-HHHHHHHhccCCceEEEEcCCCC
Q 018627          264 ADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       264 ~dvv~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      .|+++-++|.... -...++.|+++ ..+..+|....
T Consensus        79 aDi~vTaTGn~~vI~~~h~~~MKdg-aIl~N~GHfd~  114 (163)
T d1v8ba1          79 GDFFITCTGNVDVIKLEHLLKMKNN-AVVGNIGHFDD  114 (163)
T ss_dssp             CSEEEECCSSSSSBCHHHHTTCCTT-CEEEECSSTTT
T ss_pred             CcEEEEcCCCCccccHHHHHHhhCC-eEEEeccccch
Confidence            8999999998553 56778999997 88888887554

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.71  E-value=0.0021  Score=55.65  Aligned_cols=101  Identities=11%  Similarity=0.129  Sum_probs=67.8

Q ss_pred             HHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHH
Q 018627          184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       184 al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~  259 (353)
                      -+.+.+++++|++||-+|+| .|..+..+++..|+ +|++++.+++..+.+++    .|....+...  ..++     ..
T Consensus        43 ~~~~~l~l~~g~~VLDiGCG-~G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~--~~d~-----~~  113 (280)
T d2fk8a1          43 LNLDKLDLKPGMTLLDIGCG-WGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVL--LQGW-----ED  113 (280)
T ss_dssp             HHHTTSCCCTTCEEEEESCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEE--ESCG-----GG
T ss_pred             HHHHHcCCCCCCEEEEecCC-chHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhh--hhhh-----hh
Confidence            35577899999999999985 34456678888899 99999999999887644    4433211111  0111     11


Q ss_pred             hcCCccEEEe-----ccCC---hHHHHHHHHHhccCCceEEEE
Q 018627          260 TDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       260 ~~~~~dvv~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .++.||.|+.     .++.   +..+....+.|+|+ |++++-
T Consensus       114 ~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~  155 (280)
T d2fk8a1         114 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQ  155 (280)
T ss_dssp             CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEE
T ss_pred             hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEE
Confidence            2457998864     3332   24567778899997 999864

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.69  E-value=0.0036  Score=52.92  Aligned_cols=100  Identities=17%  Similarity=0.219  Sum_probs=62.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--cCCc
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      -+||+|+ +++|++.++.+...|+ +|+.. .+++++++.+    ++.|.... +  |..+ ..+..+.+.+..  -+++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i   80 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSSCC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcCCC
Confidence            4677887 8999999999999999 77765 5566655544    44554332 2  3321 223333333322  2489


Q ss_pred             cEEEeccCCh-------------------------HHHHHHHHHh--ccCCceEEEEcCCC
Q 018627          265 DYSFECIGDT-------------------------GMITTALQSC--CDGWGLAVTLGVPK  298 (353)
Q Consensus       265 dvv~d~~g~~-------------------------~~~~~~~~~l--~~~~G~~v~~g~~~  298 (353)
                      |++++++|..                         ...+.++..|  +. +|++|.+++..
T Consensus        81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~  140 (244)
T d1edoa_          81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVV  140 (244)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTH
T ss_pred             CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChh
Confidence            9999998852                         1233444444  34 49999998743

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.66  E-value=0.003  Score=53.73  Aligned_cols=83  Identities=23%  Similarity=0.330  Sum_probs=54.0

Q ss_pred             cCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh-------HHHHHhCCCceEe---CCCCCCccHHHHHHH
Q 018627          190 DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------CEKAKAFGVTEFL---NPNDNNEPVQQVIKR  258 (353)
Q Consensus       190 ~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~-------~~~~~~~G~~~~~---~~~~~~~~~~~~~~~  258 (353)
                      ..+|+.++||+|+ +++|++.+..+...|+++|+.+.+++.+       .+.+++.|..-.+   |..+ ..+..+.+..
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d-~~~~~~~~~~   83 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTD-RESVRELLGG   83 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHT
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccch-HHHHHHhhcc
Confidence            4688899999997 8999999999988999678877765322       2334556754322   2221 2223333333


Q ss_pred             HhcC-CccEEEeccCC
Q 018627          259 ITDG-GADYSFECIGD  273 (353)
Q Consensus       259 ~~~~-~~dvv~d~~g~  273 (353)
                      .... .+|.++.+.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            3223 78999998885

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.65  E-value=0.0021  Score=53.86  Aligned_cols=100  Identities=18%  Similarity=0.154  Sum_probs=66.9

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceE--eCCCCCCccHHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKR  258 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~--~~~~~~~~~~~~~~~~  258 (353)
                      +.+.+++++|++||=+|+| .|..+..+++. +. +|++++.+++-++.+++    .|...+  +..+  ..++     .
T Consensus         8 l~~~~~~~~~~rILDiGcG-tG~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d--~~~~-----~   77 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAG-AGHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGT--AESL-----P   77 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCT-TSHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECB--TTBC-----C
T ss_pred             HHHHhCCCCCCEEEEeCCc-CcHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhcccccccccccccc--cccc-----c
Confidence            5578899999999999985 46666677764 56 89999999987776643    333322  1111  1111     1


Q ss_pred             HhcCCccEEEeccCC------hHHHHHHHHHhccCCceEEEEc
Q 018627          259 ITDGGADYSFECIGD------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       259 ~~~~~~dvv~d~~g~------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +.++.||+|+.+-.-      ...+....+.|+|+ |+++..-
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~~  119 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLVD  119 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEEE
Confidence            123479999864321      34578888999997 9988753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.64  E-value=0.0029  Score=51.08  Aligned_cols=100  Identities=16%  Similarity=0.155  Sum_probs=64.6

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc-eEeCCCCCCccHHHHHHHHhc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~-~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      ...++++|++||=+|+| .|..++.+|+. +. +|++++.+++.++.+++    .|.. .+-..   ..+..+...  ..
T Consensus        27 ~~l~~~~g~~VLDiGcG-sG~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~---~gda~~~~~--~~   98 (186)
T d1l3ia_          27 CLAEPGKNDVAVDVGCG-TGGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLM---EGDAPEALC--KI   98 (186)
T ss_dssp             HHHCCCTTCEEEEESCT-TSHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEE---ESCHHHHHT--TS
T ss_pred             HhcCCCCCCEEEEEECC-eEccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEE---ECchhhccc--cc
Confidence            45688999999999874 34444555554 44 99999999998887744    5643 22111   122222221  12


Q ss_pred             CCccEEEeccCC---hHHHHHHHHHhccCCceEEEEc
Q 018627          262 GGADYSFECIGD---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       262 ~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ..||.||-....   ...++.+.+.|+++ |+++...
T Consensus        99 ~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          99 PDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             CCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence            389988865432   34577778889997 9988764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.61  E-value=0.0043  Score=47.00  Aligned_cols=75  Identities=21%  Similarity=0.380  Sum_probs=55.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      ++++|.|.|.+|..+++.+...|. .|++++.++++.+.+++.|...++- +..+.+.   +.+..-..+|.++-+++..
T Consensus         1 k~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~g-d~~~~~~---l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           1 KQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIA-NATEENE---LLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEEC-CTTCTTH---HHHHTGGGCSEEEECCCSC
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceee-ecccchh---hhccCCccccEEEEEcCch
Confidence            457888999999999999999999 9999999999999998888655442 2112332   3332112588888877753

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.59  E-value=0.0012  Score=54.27  Aligned_cols=97  Identities=12%  Similarity=0.119  Sum_probs=61.8

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .++|+|+|+ |.+|..++..+...|. +|+++.|+.+++......++..+. .+  -.+. +.+.+.. .+.|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~-gD--~~d~-~~l~~al-~~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHVVV-GD--VLQA-ADVDKTV-AGQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEEEE-SC--TTSH-HHHHHHH-TTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccccc-cc--ccch-hhHHHHh-cCCCEEEEEec
Confidence            478999998 8999999998888998 999999998886554444443332 21  1222 2233322 25899999987


Q ss_pred             Ch----------HHHHHHHHHhccC-CceEEEEcC
Q 018627          273 DT----------GMITTALQSCCDG-WGLAVTLGV  296 (353)
Q Consensus       273 ~~----------~~~~~~~~~l~~~-~G~~v~~g~  296 (353)
                      ..          ......++.++.. -.+++.++.
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            52          1122334444443 137787764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=96.59  E-value=0.0043  Score=52.28  Aligned_cols=102  Identities=15%  Similarity=0.104  Sum_probs=64.2

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCC------eEEEEcCChhhHHHH----HhCCCceE-e--CCCCCCccHHHHHHHHh--
Q 018627          197 VVIFGL-GTVGLSVAQGAKARGAS------RIIGVDTNPEKCEKA----KAFGVTEF-L--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g~~------~vi~~~~~~~~~~~~----~~~G~~~~-~--~~~~~~~~~~~~~~~~~--  260 (353)
                      |||+|+ +++|++.+..+...|++      .|+.+++++++++.+    ++.|.... +  |..+ ..+..+.+.+..  
T Consensus         4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHIVER   82 (240)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred             EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHH
Confidence            678887 89999999999888984      288889999887655    33554332 2  3321 233333333322  


Q ss_pred             cCCccEEEeccCCh-------------------------HHHHHHHHHhcc-CCceEEEEcCCCC
Q 018627          261 DGGADYSFECIGDT-------------------------GMITTALQSCCD-GWGLAVTLGVPKL  299 (353)
Q Consensus       261 ~~~~dvv~d~~g~~-------------------------~~~~~~~~~l~~-~~G~~v~~g~~~~  299 (353)
                      -+.+|++++++|..                         ...+.++..|++ ++|+++.+++...
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~  147 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA  147 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh
Confidence            24899999998852                         123334444532 2499999986443

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.50  E-value=0.015  Score=45.47  Aligned_cols=88  Identities=16%  Similarity=0.294  Sum_probs=61.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG  275 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~  275 (353)
                      +|-|+|.|.+|...+.-+...|. +|++.++++++.+.+++.++...       .+..+.+++     .|+||-|+..+.
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~~~-----~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA-------STAKAIAEQ-----CDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-------SSHHHHHHH-----CSEEEECCSSHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc-------ccHHHHHhC-----CCeEEEEcCCHH
Confidence            57789999999999998888999 99999999999999988876432       223333333     788888887655


Q ss_pred             HHHHH-------HHHhccCCceEEEEcCC
Q 018627          276 MITTA-------LQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       276 ~~~~~-------~~~l~~~~G~~v~~g~~  297 (353)
                      ..+..       ...++++ ..++.++..
T Consensus        69 ~v~~v~~~~~~~~~~~~~g-~iiid~sT~   96 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPG-TVLIDMSSI   96 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECSCC
T ss_pred             HHHHHHhCCcchhhccCCC-CEEEECCCC
Confidence            44443       2344553 555555543

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.00057  Score=57.50  Aligned_cols=98  Identities=15%  Similarity=0.178  Sum_probs=64.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc---eEeCCCCCCccHHHHHHHHhcCCccEE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT---EFLNPNDNNEPVQQVIKRITDGGADYS  267 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~---~~~~~~~~~~~~~~~~~~~~~~~~dvv  267 (353)
                      ..+|.+||-+|+| .|..+..+++..+. +|++++.+++.++.+++....   .+...   ..+.......+..+.||.+
T Consensus        51 ~~~g~~VLdIGcG-~G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~fD~i  125 (229)
T d1zx0a1          51 SSKGGRVLEVGFG-MAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPL---KGLWEDVAPTLPDGHFDGI  125 (229)
T ss_dssp             TTTCEEEEEECCT-TSHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEE---ESCHHHHGGGSCTTCEEEE
T ss_pred             ccCCCeEEEeecc-chHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhcccccccc---cccccccccccccccccce
Confidence            3678999999986 56777788877665 899999999999988764321   11111   1223333333344589877


Q ss_pred             -EeccCC----------hHHHHHHHHHhccCCceEEEE
Q 018627          268 -FECIGD----------TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       268 -~d~~g~----------~~~~~~~~~~l~~~~G~~v~~  294 (353)
                       ||.+..          ...+..+.+.|+|+ |+++..
T Consensus       126 ~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         126 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             eecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence             465432          12456677899997 999864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.43  E-value=0.013  Score=46.23  Aligned_cols=93  Identities=22%  Similarity=0.277  Sum_probs=61.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      ++|+|+|.|.+|...+..++..|. .+|++++++++.++.+++.|........  ...       ......|+|+-|+..
T Consensus         2 k~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~--~~~-------~~~~~~dlIila~p~   72 (171)
T d2g5ca2           2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTS--IAK-------VEDFSPDFVMLSSPV   72 (171)
T ss_dssp             CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESC--GGG-------GGGTCCSEEEECSCH
T ss_pred             CEEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhh--hhh-------hhccccccccccCCc
Confidence            469999999999999999988885 3799999999999999998864322111  000       011246777777764


Q ss_pred             hH---HHHHHHHHhccCCceEEEEcCC
Q 018627          274 TG---MITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       274 ~~---~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ..   .+......+.++ -.++.++..
T Consensus        73 ~~~~~vl~~l~~~~~~~-~ii~d~~s~   98 (171)
T d2g5ca2          73 RTFREIAKKLSYILSED-ATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             hhhhhhhhhhhcccccc-ccccccccc
Confidence            22   233333455554 556666554

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.41  E-value=0.0037  Score=51.83  Aligned_cols=100  Identities=16%  Similarity=0.183  Sum_probs=67.3

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceE--eCCCCCCccHHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKR  258 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~--~~~~~~~~~~~~~~~~  258 (353)
                      +.+.++++++++||-+|+| .|..+..+++. |. +|++++.+++-++.+++    .+...+  +..+  ..++     .
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d--~~~l-----~   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGD--AEQM-----P   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC--C-CC-----C
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhcccccccccccccccc--cccc-----c
Confidence            4577899999999999986 56666666654 76 89999999987776643    454432  2211  1111     1


Q ss_pred             HhcCCccEEEeccC-----C-hHHHHHHHHHhccCCceEEEEc
Q 018627          259 ITDGGADYSFECIG-----D-TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       259 ~~~~~~dvv~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +.++.||+|+-.-.     . ...+....+.|+|+ |+++...
T Consensus        77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~  118 (231)
T d1vl5a_          77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  118 (231)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            12347999986432     2 24578888999997 9999764

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.32  E-value=0.0061  Score=52.08  Aligned_cols=80  Identities=15%  Similarity=0.247  Sum_probs=52.3

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH---h-CCCceEe--CCCCCCccHHHHHHHHh--
Q 018627          192 SKGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK---A-FGVTEFL--NPNDNNEPVQQVIKRIT--  260 (353)
Q Consensus       192 ~~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~---~-~G~~~~~--~~~~~~~~~~~~~~~~~--  260 (353)
                      -+|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++   + .+...+.  +.. .+.+..+.+.+..  
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~-~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVS-KEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTT-CHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeeccc-chhhHHHHHHHHHHH
Confidence            36899999986 5  699999999999999 9999998875444332   2 2222222  222 1333333333322  


Q ss_pred             cCCccEEEeccCC
Q 018627          261 DGGADYSFECIGD  273 (353)
Q Consensus       261 ~~~~dvv~d~~g~  273 (353)
                      -+.+|+++.+.|.
T Consensus        81 ~g~id~lV~nag~   93 (274)
T d2pd4a1          81 LGSLDFIVHSVAF   93 (274)
T ss_dssp             TSCEEEEEECCCC
T ss_pred             cCCCCeEEeeccc
Confidence            3489999998874

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=96.32  E-value=0.0062  Score=50.72  Aligned_cols=101  Identities=17%  Similarity=0.251  Sum_probs=63.5

Q ss_pred             cCCCCCEEEEEcC--ChHHHHHHHHHHHCCC---CeEEEEcCChhhHHHHHh---------CCCceEeCCCCCCccHHHH
Q 018627          190 DISKGSTVVIFGL--GTVGLSVAQGAKARGA---SRIIGVDTNPEKCEKAKA---------FGVTEFLNPNDNNEPVQQV  255 (353)
Q Consensus       190 ~~~~g~~vLV~Ga--g~vG~~a~~la~~~g~---~~vi~~~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~  255 (353)
                      ++++|++||.+|+  |-....+.+++...|.   .+|++++.+++-.+.+++         .+...+....   .+..+.
T Consensus        77 ~l~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~---~d~~~~  153 (223)
T d1r18a_          77 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE---GDGRKG  153 (223)
T ss_dssp             TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE---SCGGGC
T ss_pred             ccCCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe---cccccc
Confidence            7899999999986  3355555566666553   279999999987666533         1222221111   000000


Q ss_pred             HHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEE-EcC
Q 018627          256 IKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVT-LGV  296 (353)
Q Consensus       256 ~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~-~g~  296 (353)
                        ....++||.|+-+.+.+...+..++.|+++ |++|. +|.
T Consensus       154 --~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~pvg~  192 (223)
T d1r18a_         154 --YPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPVGP  192 (223)
T ss_dssp             --CGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEESC
T ss_pred             --cccccceeeEEEEeechhchHHHHHhcCCC-cEEEEEEec
Confidence              011237998888777656667788999997 99987 553

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.29  E-value=0.004  Score=51.97  Aligned_cols=94  Identities=18%  Similarity=0.211  Sum_probs=66.6

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      ...++.+||=+|+| .|..+..+++ .|+ +|++++.+++.++.+++.+....+...  ..++     ...++.||+|+.
T Consensus        39 ~~~~~~~vLDiGcG-~G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~--~~~l-----~~~~~~fD~ii~  108 (246)
T d2avna1          39 YLKNPCRVLDLGGG-TGKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAK--AEDL-----PFPSGAFEAVLA  108 (246)
T ss_dssp             HCCSCCEEEEETCT-TCHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECC--TTSC-----CSCTTCEEEEEE
T ss_pred             hcCCCCEEEEECCC-Cchhcccccc-cce-EEEEeeccccccccccccccccccccc--cccc-----ccccccccceee
Confidence            35678899999987 6777777776 588 999999999999999887766554332  1111     122358999885


Q ss_pred             ccC------C-hHHHHHHHHHhccCCceEEEE
Q 018627          270 CIG------D-TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       270 ~~g------~-~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ...      . ...+....+.|+++ |.++..
T Consensus       109 ~~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         109 LGDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             CSSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ecchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            432      1 23467777899997 988764

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.25  E-value=0.021  Score=42.99  Aligned_cols=74  Identities=22%  Similarity=0.365  Sum_probs=54.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +|+|.|+|.+|..+++.+...|. .|++++.++++.+.+++ ++...+. -+   ..-.+.+++..-..+|.++-+++..
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~vi~-Gd---~~~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GD---CTKIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SC---TTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhhhcc-Cc---ccchhhhhhcChhhhhhhcccCCcH
Confidence            68999999999999999999999 99999999999988765 5654332 21   1122344443333789999888764

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.19  E-value=0.011  Score=50.80  Aligned_cols=102  Identities=11%  Similarity=0.098  Sum_probs=68.4

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce---EeCCCCCCccHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIK  257 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~---~~~~~~~~~~~~~~~~  257 (353)
                      |.+...+++|++||=+|+| .|..+..+++..|+ +|++++.++..++.+++    .|...   ++..+  ..++     
T Consensus        59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d--~~~l-----  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGS--FLEI-----  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECC--TTSC-----
T ss_pred             HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCc-EEEEEeccchhhhhhhcccccccccccccccccc--cccc-----
Confidence            3455678999999999986 46667778887788 99999999988776654    34321   22111  1111     


Q ss_pred             HHhcCCccEEEeccC-----C-hHHHHHHHHHhccCCceEEEEcC
Q 018627          258 RITDGGADYSFECIG-----D-TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ...++.||+|+-.-.     . ...+..+.+.|+|+ |+++....
T Consensus       130 ~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            112347999986322     1 24577888999997 99887653

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.19  E-value=0.03  Score=49.18  Aligned_cols=104  Identities=18%  Similarity=0.156  Sum_probs=67.3

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-----------CCC----ceEeCCCCCC
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-----------FGV----TEFLNPNDNN  249 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-----------~G~----~~~~~~~~~~  249 (353)
                      +.+..+++++++||-+|+| .|..+.++|+..+++++++++.+++..+.+++           +|.    ..++.-+...
T Consensus       143 ~~~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~  221 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  221 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred             HHHHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence            4477889999999999986 68888899999998789999999987666533           121    1222221112


Q ss_pred             ccHHHHHHHHhcCCccEEEeccC-C-h---HHHHHHHHHhccCCceEEEEc
Q 018627          250 EPVQQVIKRITDGGADYSFECIG-D-T---GMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       250 ~~~~~~~~~~~~~~~dvv~d~~g-~-~---~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ..+.+.+.     .+|+|+-..- . +   ..+...++.|++| |++|..-
T Consensus       222 ~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         222 EEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             HHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             cccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            22333332     2678874321 1 1   2345566678997 9998764

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.16  E-value=0.017  Score=49.16  Aligned_cols=105  Identities=16%  Similarity=0.218  Sum_probs=70.6

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----C--C-CceEeCCCCCCccHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----F--G-VTEFLNPNDNNEPVQQVI  256 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~--G-~~~~~~~~~~~~~~~~~~  256 (353)
                      +...++++||++||=.|+| .|.+++.+|++.|. .+|+.++.+++.++.+++    +  + .+.+....   .+..+  
T Consensus        88 Ii~~l~i~PG~~VLE~G~G-sG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~---~d~~~--  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVV---SDLAD--  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEEC---SCGGG--
T ss_pred             HHHHhCCCCCCEEEecCcC-CcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEe---ccccc--
Confidence            3467899999999999875 47777788888753 389999999999888865    1  1 12221111   11110  


Q ss_pred             HHHhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEcC
Q 018627          257 KRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       257 ~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ..+..+.||.||-....+ ..+..+.+.|+++ |+++.+-.
T Consensus       162 ~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~P  201 (264)
T d1i9ga_         162 SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  201 (264)
T ss_dssp             CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEeC
Confidence            011233799777666653 4678889999997 99998753

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.0031  Score=55.76  Aligned_cols=103  Identities=18%  Similarity=0.185  Sum_probs=65.9

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CC-----------CceE--eCCCC
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FG-----------VTEF--LNPND  247 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G-----------~~~~--~~~~~  247 (353)
                      ...+++++|++||=.|+| .|.+++.+|++.|. .+|++++.+++..+.+++    ++           .+.+  +..+ 
T Consensus        91 l~~l~i~pG~rVLE~GtG-sG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d-  168 (324)
T d2b25a1          91 LSMMDINPGDTVLEAGSG-SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD-  168 (324)
T ss_dssp             HHHHTCCTTCEEEEECCT-TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC-
T ss_pred             HHHhCCCCCCEEEEeccc-ccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc-
Confidence            456799999999999875 37788888888764 389999999998887754    11           1111  1111 


Q ss_pred             CCccHHHHHHHHhcCCccEEEeccCCh-HHHHHHHHHhccCCceEEEEc
Q 018627          248 NNEPVQQVIKRITDGGADYSFECIGDT-GMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       248 ~~~~~~~~~~~~~~~~~dvv~d~~g~~-~~~~~~~~~l~~~~G~~v~~g  295 (353)
                       -.++..   ....+.||.||=-+..+ ..+..+.+.|+|+ |+++.+-
T Consensus       169 -i~~~~~---~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         169 -ISGATE---DIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             -TTCCC----------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             -hhhccc---ccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence             111111   11123688777444433 4678888999997 9999875

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.93  E-value=0.035  Score=43.32  Aligned_cols=45  Identities=20%  Similarity=0.272  Sum_probs=39.5

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT  240 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~  240 (353)
                      ++|-++|.|.+|...+.-+...|+ .|.+.++++++.+.+.+.++.
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~   46 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGAS   46 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcc
Confidence            468899999999998888888899 999999999999988887754

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.92  E-value=0.024  Score=45.96  Aligned_cols=88  Identities=17%  Similarity=0.175  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..++++++.+|+ +|++.+.........  .+..        ..++.+.+++     .|+++-++.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~--------~~~l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY--------VDSLDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB--------CSCHHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee--------eccccccccc-----cccccccCC
Confidence            47999999999999999999999999 999997665433222  2211        2345555554     788888775


Q ss_pred             ChH-----HHHHHHHHhccCCceEEEEcCC
Q 018627          273 DTG-----MITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~~-----~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ...     .-...++.|+++ ..+|.++-.
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~sRG  134 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQD-VVIVNVSRG  134 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECSCG
T ss_pred             ccccccccccHHHHhhhCCc-cEEEecCch
Confidence            321     125667899997 888888753

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.88  E-value=0.016  Score=45.92  Aligned_cols=93  Identities=12%  Similarity=0.053  Sum_probs=58.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CC---CceEeCCCCCCccHHHHHHHHhcCCccE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG---VTEFLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G---~~~~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      ..++++|||.|+|+.+.+++..+...+. +|+.+.|+.++.+.+.+ +.   ....+...           ......+|+
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~-----------~~~~~~~di   82 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMD-----------SIPLQTYDL   82 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGG-----------GCCCSCCSE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhc-----------cccccccce
Confidence            4478999999999999999988877564 99999999988776633 32   11111111           111237999


Q ss_pred             EEeccCChHH---HHHHHHHhccCCceEEEEcC
Q 018627          267 SFECIGDTGM---ITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       267 v~d~~g~~~~---~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +++|++....   .......++++ ..++.+-.
T Consensus        83 iIN~tp~g~~~~~~~~~~~~~~~~-~~~~D~vy  114 (171)
T d1p77a1          83 VINATSAGLSGGTASVDAEILKLG-SAFYDMQY  114 (171)
T ss_dssp             EEECCCC-------CCCHHHHHHC-SCEEESCC
T ss_pred             eeecccccccccccchhhhhhccc-ceeeeeec
Confidence            9999874211   11112345554 66666643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.86  E-value=0.019  Score=48.27  Aligned_cols=81  Identities=15%  Similarity=0.212  Sum_probs=52.9

Q ss_pred             CCCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCC-CCccHHHHHHHHh--c
Q 018627          192 SKGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPND-NNEPVQQVIKRIT--D  261 (353)
Q Consensus       192 ~~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~-~~~~~~~~~~~~~--~  261 (353)
                      -.|+++||+|+ +  ++|.+.+..+...|+ +|+.++++++..+.+.+    .+....+.... ...+..+......  .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            46899999987 5  699999999999999 89888888776554433    44444332221 1222333333332  2


Q ss_pred             CCccEEEeccCC
Q 018627          262 GGADYSFECIGD  273 (353)
Q Consensus       262 ~~~dvv~d~~g~  273 (353)
                      +..|+.+++++.
T Consensus        82 ~~~d~~v~~a~~   93 (258)
T d1qsga_          82 PKFDGFVHSIGF   93 (258)
T ss_dssp             SSEEEEEECCCC
T ss_pred             cccceEEEeecc
Confidence            378999988754

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.86  E-value=0.009  Score=50.36  Aligned_cols=77  Identities=14%  Similarity=0.264  Sum_probs=49.8

Q ss_pred             CEEEEEcC-ChHHHHHHHHHH---HCCCCeEEEEcCChhhHHHHHh----CCCceEe--CCCCCCccHHHHHH---HHhc
Q 018627          195 STVVIFGL-GTVGLSVAQGAK---ARGASRIIGVDTNPEKCEKAKA----FGVTEFL--NPNDNNEPVQQVIK---RITD  261 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~---~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~--~~~~~~~~~~~~~~---~~~~  261 (353)
                      ++|||+|+ +++|+++++.+.   ..|+ +|+++++++++++.+++    .+-..++  |..+ .++..+.+.   ....
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEGVTK   80 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc-HHHHHHHHhhhHHHhh
Confidence            68999998 899999887654   3578 89999999988765543    2222222  3321 233333333   3333


Q ss_pred             -CCccEEEeccCC
Q 018627          262 -GGADYSFECIGD  273 (353)
Q Consensus       262 -~~~dvv~d~~g~  273 (353)
                       +++|+++++.|.
T Consensus        81 ~~~iDiLvnNAg~   93 (248)
T d1snya_          81 DQGLNVLFNNAGI   93 (248)
T ss_dssp             GGCCSEEEECCCC
T ss_pred             cCCcceEEeeccc
Confidence             489999999874

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.85  E-value=0.041  Score=49.71  Aligned_cols=105  Identities=20%  Similarity=0.218  Sum_probs=68.0

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC---------------CCceE-eCCCCC
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF---------------GVTEF-LNPNDN  248 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~---------------G~~~~-~~~~~~  248 (353)
                      +.+..++++|+++|=+|+| .|..+.++|+..|++++++++.++...+.+++.               +.... +.-...
T Consensus       208 Il~~l~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            3477899999999999987 799999999999887999999999877766431               11111 111111


Q ss_pred             CccHHHHHHHHhcCCccEEEecc-C-C---hHHHHHHHHHhccCCceEEEEc
Q 018627          249 NEPVQQVIKRITDGGADYSFECI-G-D---TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       249 ~~~~~~~~~~~~~~~~dvv~d~~-g-~---~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ..+..   .... ..+|+++-.. - .   ...+...++.|++| |++|..-
T Consensus       287 ~~~~~---d~~~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~~  333 (406)
T d1u2za_         287 DNNRV---AELI-PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISLK  333 (406)
T ss_dssp             TCHHH---HHHG-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             hcccc---cccc-ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEec
Confidence            11111   1111 1477777432 1 1   23456667789997 9999864

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.81  E-value=0.028  Score=45.73  Aligned_cols=81  Identities=30%  Similarity=0.343  Sum_probs=60.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      -.|++|+|.|.|.+|..+++.+...|+ +|++++.+.++.+...++|+..+ ..    .       +......|+++=|.
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~-~~----~-------~~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-AL----E-------DVLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CG----G-------GGGGCCCSEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccccc-Cc----c-------ccccccceeeeccc
Confidence            368999999999999999999999999 99999999999999888887543 11    1       11223688888776


Q ss_pred             CChHHHHHHHHHhc
Q 018627          272 GDTGMITTALQSCC  285 (353)
Q Consensus       272 g~~~~~~~~~~~l~  285 (353)
                      .+...-....+.++
T Consensus        92 ~~~~I~~~~a~~i~  105 (201)
T d1c1da1          92 MGGVITTEVARTLD  105 (201)
T ss_dssp             CSCCBCHHHHHHCC
T ss_pred             ccccccHHHHhhhh
Confidence            55344444555554

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.80  E-value=0.011  Score=41.80  Aligned_cols=36  Identities=42%  Similarity=0.487  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      +|++|+|+|.|..|+++++++...|+ +|++.+.+..
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcC
Confidence            57899999999999999999999999 9999987553

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.69  E-value=0.05  Score=41.87  Aligned_cols=83  Identities=22%  Similarity=0.254  Sum_probs=56.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +|.++|+|.+|.+.++-+...|..+|+++++++++.+.+++ +|+...-+..    .    +     ...|+||=|+. |
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~~~~----~----v-----~~~Div~lavk-P   67 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLP----E----L-----HSDDVLILAVK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCC----C----C-----CTTSEEEECSC-H
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccccccc----c----c-----cccceEEEecC-H
Confidence            58899999999988874444453499999999999887755 6754332221    1    0     14688888876 4


Q ss_pred             HHHHHHHHHhccCCceEEE
Q 018627          275 GMITTALQSCCDGWGLAVT  293 (353)
Q Consensus       275 ~~~~~~~~~l~~~~G~~v~  293 (353)
                      ..+...++.+++. +.++.
T Consensus        68 ~~~~~v~~~l~~~-~~~vi   85 (152)
T d1yqga2          68 QDMEAACKNIRTN-GALVL   85 (152)
T ss_dssp             HHHHHHHTTCCCT-TCEEE
T ss_pred             HHHHHhHHHHhhc-ccEEe
Confidence            5666766666664 65543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.69  E-value=0.013  Score=51.67  Aligned_cols=105  Identities=21%  Similarity=0.191  Sum_probs=65.1

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHH--hcCC
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI--TDGG  263 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~--~~~~  263 (353)
                      .+++|++||-.++| .|..++.+|+ .|+++|++++.+++.++.+++    .|....+...  ..+..+.+..+  .++.
T Consensus       142 ~~~~g~~VLDl~~g-~G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~--~~d~~~~~~~~~~~~~~  217 (324)
T d2as0a2         142 WVQPGDRVLDVFTY-TGGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFI--VGSAFEEMEKLQKKGEK  217 (324)
T ss_dssp             GCCTTCEEEETTCT-TTHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHTTCC
T ss_pred             hcCCCCeeecccCc-ccchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceee--echhhhhhHHHHhccCC
Confidence            36789999988653 2333334444 477799999999998887744    5553211111  22333444333  2348


Q ss_pred             ccEEEeccCC---------------hHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          264 ADYSFECIGD---------------TGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       264 ~dvv~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      ||+|+-....               ...+..++++++++ |.++.+.....
T Consensus       218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s~~  267 (324)
T d2as0a2         218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCSQH  267 (324)
T ss_dssp             EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECCTT
T ss_pred             CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCCcc
Confidence            9988853221               12566777899997 99999876544

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.60  E-value=0.0091  Score=50.22  Aligned_cols=47  Identities=30%  Similarity=0.357  Sum_probs=39.9

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCc
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVT  240 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~  240 (353)
                      +|+.+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            6899999998 8999999999999999 899999998877655 445543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=95.46  E-value=0.014  Score=49.45  Aligned_cols=81  Identities=14%  Similarity=0.268  Sum_probs=53.0

Q ss_pred             CCCCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChhhH-HHH-HhCCCceE---eCCCCCCc---cHHHHHHHH
Q 018627          191 ISKGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKC-EKA-KAFGVTEF---LNPNDNNE---PVQQVIKRI  259 (353)
Q Consensus       191 ~~~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~~~-~~~-~~~G~~~~---~~~~~~~~---~~~~~~~~~  259 (353)
                      +-.|+++||+|+ |  ++|.+.++.+...|+ +|+.+.+++++. +.+ ++++....   .+..+ +.   ...+.+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~-~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN-EEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC-HHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeeccc-ccccccccchhhhc
Confidence            457899999984 4  599999999999999 899898887765 333 44554331   22221 22   233334433


Q ss_pred             hc--CCccEEEeccCC
Q 018627          260 TD--GGADYSFECIGD  273 (353)
Q Consensus       260 ~~--~~~dvv~d~~g~  273 (353)
                      ..  +.+|++++++|.
T Consensus        81 ~~~~~~ld~~i~~ag~   96 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGF   96 (268)
T ss_dssp             HCTTCCEEEEEECCCC
T ss_pred             cccCCCcceeeecccc
Confidence            32  378999999873

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.39  E-value=0.031  Score=45.74  Aligned_cols=102  Identities=15%  Similarity=0.025  Sum_probs=64.7

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcCC
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      ...++||++||=+|+| .|..+..+++..+-.+|++++.+++.++.+++    .+....+..+......   . ......
T Consensus        51 ~l~lkpg~~VLDlGcG-~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~---~-~~~~~~  125 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAA-SGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK---Y-SGIVEK  125 (209)
T ss_dssp             CCCCCSSCEEEEETCT-TSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG---T-TTTCCC
T ss_pred             cCCCCCCCEEEEeCCc-CCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc---c-ccccce
Confidence            4678999999999985 35566677777765599999999988776633    4433333222111111   0 111125


Q ss_pred             ccEEEeccCCh----HHHHHHHHHhccCCceEEEEc
Q 018627          264 ADYSFECIGDT----GMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       264 ~dvv~d~~g~~----~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +|+++..+...    ..+..+.+.|+++ |+++.+-
T Consensus       126 vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~  160 (209)
T d1nt2a_         126 VDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIMV  160 (209)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEEEEecccChhhHHHHHHHHHHHhccC-CeEEEEE
Confidence            77887655432    2466677899997 9988763

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.29  E-value=0.018  Score=47.65  Aligned_cols=105  Identities=12%  Similarity=0.013  Sum_probs=64.9

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEe------------CCCCCC----
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFL------------NPNDNN----  249 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~------------~~~~~~----  249 (353)
                      +...+.++.+||..|+| .|..+..+|+ .|+ +|+++|.|++-++.+++ .+.....            ......    
T Consensus        39 ~~l~~~~~~rvLd~GCG-~G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCG-KAVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTCT-TCTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCCC-CcHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            44567899999999986 3777777776 599 99999999998887755 2211110            000000    


Q ss_pred             -ccHHHHHHHHhcCCccEEEeccCC--------hHHHHHHHHHhccCCceEEEEcC
Q 018627          250 -EPVQQVIKRITDGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       250 -~~~~~~~~~~~~~~~dvv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                       .++. .+.....+.+|+|+++.--        ...+....++|+|+ |++++...
T Consensus       116 ~~d~~-~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         116 CCSIF-DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             ESCGG-GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             Ecchh-hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence             0110 0011122378999986532        23456777899997 98776654

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.038  Score=47.42  Aligned_cols=76  Identities=20%  Similarity=0.239  Sum_probs=44.4

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCC--eEEEEcCChhhHH----HHHhC---CCce-E--eCCCCCCccHHHHHHHHhcCC
Q 018627          197 VVIFGL-GTVGLSVAQGAKARGAS--RIIGVDTNPEKCE----KAKAF---GVTE-F--LNPNDNNEPVQQVIKRITDGG  263 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g~~--~vi~~~~~~~~~~----~~~~~---G~~~-~--~~~~~~~~~~~~~~~~~~~~~  263 (353)
                      |||+|+ +++|.+.+..+...|++  .|+.+.++.++.+    .++++   +... .  .|.. +..+..+.+.+...+.
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~g~   83 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVR-DSKSVAAARERVTEGR   83 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTT-CHHHHHHHHHTCTTSC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEecccc-chHhhhhhhhhccccc
Confidence            467787 89999999999999983  2334444444332    23333   2222 2  2332 1333444444444458


Q ss_pred             ccEEEeccCC
Q 018627          264 ADYSFECIGD  273 (353)
Q Consensus       264 ~dvv~d~~g~  273 (353)
                      +|+++++.|.
T Consensus        84 idilvnnag~   93 (285)
T d1jtva_          84 VDVLVCNAGL   93 (285)
T ss_dssp             CSEEEECCCC
T ss_pred             hhhhhhcccc
Confidence            9999998875

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.15  E-value=0.18  Score=38.31  Aligned_cols=96  Identities=15%  Similarity=0.083  Sum_probs=65.6

Q ss_pred             CEEEEEc-CChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC--CccEEEecc
Q 018627          195 STVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG--GADYSFECI  271 (353)
Q Consensus       195 ~~vLV~G-ag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~dvv~d~~  271 (353)
                      ++|.|+| .|.+|..++..++..|+ .|.+.+++++........+++.++.... .....+.+.+..+.  .=.+++|+.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~v~~~~~~~~~~~~iiiD~~   87 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP-INLTLETIERLKPYLTENMLLADLT   87 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC-GGGHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc-hhhheeeeecccccccCCceEEEec
Confidence            6899999 59999999999999999 9999999887777666667777654432 34444555554433  234888987


Q ss_pred             CChHHHHHHHHHhccCCceEEEE
Q 018627          272 GDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      +........+....+  .+++..
T Consensus        88 Svk~~~~~~~~~~~~--~~~v~~  108 (152)
T d2pv7a2          88 SVKREPLAKMLEVHT--GAVLGL  108 (152)
T ss_dssp             SCCHHHHHHHHHHCS--SEEEEE
T ss_pred             ccCHHHHHHHHHHcc--CCEEEe
Confidence            754444444444443  456544

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.06  E-value=0.025  Score=46.95  Aligned_cols=102  Identities=16%  Similarity=0.183  Sum_probs=66.0

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      +...+++|++||=+|+| .|..+..+++..|- .+|++++.+++.++.+++    .+....+..+.....   ... ...
T Consensus        67 ~~l~i~pG~~VLDlGaG-sG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~---~~~-~~~  141 (227)
T d1g8aa_          67 KNFPIKPGKSVLYLGIA-SGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE---EYR-ALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETTT-STTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG---GGT-TTC
T ss_pred             cccccCCCCEEEEeccC-CCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcc---ccc-ccc
Confidence            45679999999999975 46777778887653 489999999998887754    232222222111111   111 112


Q ss_pred             CCccEEEeccCCh----HHHHHHHHHhccCCceEEEE
Q 018627          262 GGADYSFECIGDT----GMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       262 ~~~dvv~d~~g~~----~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ..+|+++..+..+    ..+..+...|+++ |+++.+
T Consensus       142 ~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            3788888765432    2467777899997 998865

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.96  E-value=0.13  Score=39.87  Aligned_cols=93  Identities=15%  Similarity=0.228  Sum_probs=55.5

Q ss_pred             CEEEEEcCChHHH-HHHHHHHHCCCCeEEEE-cCChh--hHHHHHhCCCceEeCCCCCCccHHHHHHHHh-cCCccEEEe
Q 018627          195 STVVIFGLGTVGL-SVAQGAKARGASRIIGV-DTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGGADYSFE  269 (353)
Q Consensus       195 ~~vLV~Gag~vG~-~a~~la~~~g~~~vi~~-~~~~~--~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~dvv~d  269 (353)
                      -++.|+|+|.+|. .+.++++......++++ +++.+  ..+.++++|.....      ... +.+.+.. ...+|+||.
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~------~~~-d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AGV-EGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SHH-HHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCcccc------cce-eeeeecccccccCEEEE
Confidence            4788999999986 56778777644366665 44443  35677888865432      122 3333222 236999999


Q ss_pred             ccCChHHHHHHH--HHhccCCceEEEEc
Q 018627          270 CIGDTGMITTAL--QSCCDGWGLAVTLG  295 (353)
Q Consensus       270 ~~g~~~~~~~~~--~~l~~~~G~~v~~g  295 (353)
                      ++........++  +.++.+ -+++...
T Consensus        78 ATpag~h~~~~~~~~aa~~G-~~VID~s  104 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKPG-IRLIDLT  104 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEECS
T ss_pred             cCCchhHHHhHHHHHHHHcC-CEEEEcc
Confidence            987544555443  345553 4454444

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.80  E-value=0.12  Score=40.68  Aligned_cols=99  Identities=20%  Similarity=0.189  Sum_probs=64.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCCeEEEE-cC-ChhhHHHHHhCCCceEeCCCCCCccHHHHHHH-------H--hcCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGV-DT-NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR-------I--TDGG  263 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~-g~~~vi~~-~~-~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-------~--~~~~  263 (353)
                      +|.|.|-|-+|..+++.+... .. .++++ +. +......+.+.+.+......   .........       +  ...+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   79 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASE---EFIPRFEKEGFEVAGTLNDLLEK   79 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSG---GGHHHHHHHTCCCSCBHHHHHTT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccc---cceeeecccCccccchhhhhhcc
Confidence            688999999999988887655 35 56655 33 33445566777765443221   111111110       0  0126


Q ss_pred             ccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          264 ADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       264 ~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +|+|+||+|.....+.+-..+..+ -+.|.++....
T Consensus        80 vDvViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~~  114 (172)
T d2czca2          80 VDIIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEKA  114 (172)
T ss_dssp             CSEEEECCSTTHHHHHHHHHHHHT-CEEEECTTSCG
T ss_pred             CCEEEECCCCCCCHHHHHHHHHcC-CCEEEECCCCc
Confidence            999999999877778888889996 88888887544

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.78  E-value=0.068  Score=44.22  Aligned_cols=102  Identities=19%  Similarity=0.231  Sum_probs=68.7

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHH----
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI----  259 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~----  259 (353)
                      .+....++||=+|.+ +|..++.+|+++. -.+++.++.+++..+.+++    .|...-+...  ..+..+.+.++    
T Consensus        55 ~~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~--~g~a~~~L~~l~~~~  131 (227)
T d1susa1          55 LKLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFR--EGPALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHCG
T ss_pred             HHhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeee--ehHHHHHHHHHHhcc
Confidence            344567899999864 6888888998873 2399999999998877754    5765533222  23444555544    


Q ss_pred             -hcCCccEEEeccCC---hHHHHHHHHHhccCCceEEEE
Q 018627          260 -TDGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       260 -~~~~~dvv~d~~g~---~~~~~~~~~~l~~~~G~~v~~  294 (353)
                       ..+.||.||--...   ...++.++.+++++ |.++.=
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~D  169 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYD  169 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEE
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEc
Confidence             23479988754332   24578888999997 887754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.78  E-value=0.056  Score=45.33  Aligned_cols=34  Identities=26%  Similarity=0.311  Sum_probs=29.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK  230 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~  230 (353)
                      ..||+|+ +++|.+.+..+...|+ +|+.++++.++
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~   37 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG   37 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence            3578887 8999999999999999 99999887654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.75  E-value=0.028  Score=44.97  Aligned_cols=84  Identities=21%  Similarity=0.378  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..++++++.+|+ +|++.+++...       +....      ..++.+.++     ..|+|+-++.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~------~~~l~ell~-----~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRF------TNSLEEALR-----EARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCC------BSCSHHHHT-----TCSEEEECCC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceee------eechhhhhh-----ccchhhcccc
Confidence            58999999999999999999999999 99999876432       11111      112333333     3788888775


Q ss_pred             Ch-HH----HHHHHHHhccCCceEEEEcC
Q 018627          273 DT-GM----ITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       273 ~~-~~----~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .. ++    -...++.|+++ ..+|.++-
T Consensus       102 l~~~t~~li~~~~l~~mk~~-ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAED-AVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             cccccccccccceeeecccc-ceEEeccc
Confidence            32 11    25667889997 99999874

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.74  E-value=0.068  Score=44.27  Aligned_cols=96  Identities=20%  Similarity=0.279  Sum_probs=63.0

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc-eEeCCCCCCccHHHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~-~~~~~~~~~~~~~~~~~~~  259 (353)
                      +.......++++||=+|+|. |..+..+++ .|+ +|++++.+++-++.+++    .+.. .++..+  .       .++
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d--~-------~~l  100 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD--V-------LEI  100 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC--G-------GGC
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh--h-------hhc
Confidence            34555677888999999863 777666666 588 99999999988877754    2322 122111  1       111


Q ss_pred             h-cCCccEEEeccCC------h---HHHHHHHHHhccCCceEEE
Q 018627          260 T-DGGADYSFECIGD------T---GMITTALQSCCDGWGLAVT  293 (353)
Q Consensus       260 ~-~~~~dvv~d~~g~------~---~~~~~~~~~l~~~~G~~v~  293 (353)
                      . ++.||+|+...+.      +   ..+....+.|+|+ |.++.
T Consensus       101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            1 3479998864321      1   3467778899997 98875

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.70  E-value=0.028  Score=49.36  Aligned_cols=46  Identities=24%  Similarity=0.353  Sum_probs=38.6

Q ss_pred             ccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH
Q 018627          189 ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK  235 (353)
Q Consensus       189 ~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~  235 (353)
                      .-+.+|++|||+|+ |-+|..++..+...|+ +|+++.++.++.+.++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            34678999999998 8899999998888899 8999888887766553

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.68  E-value=0.037  Score=45.01  Aligned_cols=73  Identities=19%  Similarity=0.172  Sum_probs=46.6

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+|||+|+ |.+|..++..+...|.+ .|+...+++++.+.+.. +...+. .+  ..+. +.+.+.. .++|.|+.+++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~~-~d--~~~~-~~~~~~~-~~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVFI-GD--ITDA-DSINPAF-QGIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEEE-CC--TTSH-HHHHHHH-TTCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEEE-ee--eccc-ccccccc-ccceeeEEEEe
Confidence            68999998 99999999999888853 56777788877655432 333222 11  1112 2222222 25899998876


Q ss_pred             C
Q 018627          273 D  273 (353)
Q Consensus       273 ~  273 (353)
                      .
T Consensus        78 ~   78 (252)
T d2q46a1          78 A   78 (252)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=94.61  E-value=0.064  Score=46.24  Aligned_cols=74  Identities=23%  Similarity=0.332  Sum_probs=46.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC-----ChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEE
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-----NPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSF  268 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~-----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~  268 (353)
                      +|||+|+ |-+|..++..+...|. +|+++++     ..++...+...+-..++..+-.+.   +.+.+...+ ++|+||
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~---~~l~~~~~~~~~d~Vi   77 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK---NDVTRLITKYMPDSCF   77 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH---HHHHHHHHHHCCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCCH---HHHHHHHHhcCCceEE
Confidence            6999998 8899999999988899 8998863     112333444444333332221121   223333333 789999


Q ss_pred             eccCC
Q 018627          269 ECIGD  273 (353)
Q Consensus       269 d~~g~  273 (353)
                      .+++.
T Consensus        78 h~aa~   82 (338)
T d1orra_          78 HLAGQ   82 (338)
T ss_dssp             ECCCC
T ss_pred             eeccc
Confidence            98763

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.57  E-value=0.077  Score=42.61  Aligned_cols=91  Identities=16%  Similarity=0.255  Sum_probs=60.2

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|+++.|+|.|.+|...+++++..|. +|+..++...........+...       ..++.+.+.+     .|+|.-++.
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~-------~~~l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF-------HDSLDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE-------CSSHHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc-------cCCHHHHHhh-----CCeEEecCC
Confidence            37999999999999999999999999 9999987655433333322211       1234444443     677776654


Q ss_pred             Ch-H----HHHHHHHHhccCCceEEEEcCC
Q 018627          273 DT-G----MITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~-~----~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .. +    .=...++.|+++ ..+|.++-.
T Consensus       113 lt~~T~~li~~~~l~~mk~~-a~lIN~sRG  141 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQG-AIVVNTARG  141 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSCG
T ss_pred             CCchHhheecHHHhhCcCCc-cEEEecCCc
Confidence            31 1    124566778886 778877643

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.57  E-value=0.09  Score=41.40  Aligned_cols=44  Identities=14%  Similarity=0.254  Sum_probs=38.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV  239 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~  239 (353)
                      .+|-++|.|.+|..++.-+...|+ +|++.++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468899999999999999888999 99999999999998876554

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.56  E-value=0.058  Score=44.74  Aligned_cols=102  Identities=14%  Similarity=0.122  Sum_probs=62.7

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC----CCceEeCCCCCCccHHHHHHHHhcC
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      +...+++|++||=+|+| .|..+..+++...-..|++++.+++.++.+++.    +....+...  ..... .... ...
T Consensus        68 ~~l~ikpG~~VLDlGcG-sG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d--~~~~~-~~~~-~~~  142 (230)
T d1g8sa_          68 KVMPIKRDSKILYLGAS-AGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGD--ANKPQ-EYAN-IVE  142 (230)
T ss_dssp             CCCCCCTTCEEEEESCC-SSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECC--TTCGG-GGTT-TCC
T ss_pred             HhCCCCCCCEEEEeCEE-cCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEe--eccCc-cccc-ccc
Confidence            45679999999999985 466666777765444899999999888877552    222222221  11110 1111 111


Q ss_pred             CccEEEeccCC----hHHHHHHHHHhccCCceEEEE
Q 018627          263 GADYSFECIGD----TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       263 ~~dvv~d~~g~----~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      .+|+++..+..    ...+..+...|+++ |+++.+
T Consensus       143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~  177 (230)
T d1g8sa_         143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence            45666665542    23366677889997 998866

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.56  E-value=0.097  Score=40.21  Aligned_cols=86  Identities=15%  Similarity=0.219  Sum_probs=62.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +|.++|+|.+|.+.+.-....+. ++++.+++.++.+.+ +++|+...       .+..+.+.     ..|+||=|+. +
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~-------~~~~~~~~-----~~dvIilavk-p   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA-------MSHQDLID-----QVDLVILGIK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC-------SSHHHHHH-----TCSEEEECSC-G
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee-------chhhhhhh-----ccceeeeecc-h
Confidence            57889999999998887666787 899999998887776 55775432       22333333     4899999986 4


Q ss_pred             HHHHHHHHHhccCCceEEEEcC
Q 018627          275 GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       275 ~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ..+...++.+.++ ..++.+..
T Consensus        68 ~~~~~vl~~l~~~-~~iis~~a   88 (152)
T d2ahra2          68 QLFETVLKPLHFK-QPIISMAA   88 (152)
T ss_dssp             GGHHHHHTTSCCC-SCEEECCT
T ss_pred             HhHHHHhhhcccc-eeEecccc
Confidence            6677888888885 77776543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.38  E-value=0.0058  Score=47.86  Aligned_cols=91  Identities=11%  Similarity=0.109  Sum_probs=55.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--EeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      +|+|+|+|.+|.+.+..+...|. .|..+++++++.+..+..+...  .....  ..+..+.+     +.+|++|-++..
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~~D~iii~vka   73 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESL--TANDPDFL-----ATSDLLLVTLKA   73 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEE--EESCHHHH-----HTCSEEEECSCG
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCcccccccc--ccchhhhh-----cccceEEEeecc
Confidence            68999999999999999888999 9999988887654433222211  10000  01111222     259999999986


Q ss_pred             hHHHHHHHHHh----ccCCceEEEEcC
Q 018627          274 TGMITTALQSC----CDGWGLAVTLGV  296 (353)
Q Consensus       274 ~~~~~~~~~~l----~~~~G~~v~~g~  296 (353)
                      . ..+.+++.+    .++ ..++.+..
T Consensus        74 ~-~~~~~~~~l~~~~~~~-~~Iv~~qN   98 (167)
T d1ks9a2          74 W-QVSDAVKSLASTLPVT-TPILLIHN   98 (167)
T ss_dssp             G-GHHHHHHHHHTTSCTT-SCEEEECS
T ss_pred             c-chHHHHHhhccccCcc-cEEeeccC
Confidence            3 344444433    343 55666543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.37  E-value=0.054  Score=39.77  Aligned_cols=41  Identities=24%  Similarity=0.236  Sum_probs=35.7

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +..+..++++|+|+|+|.+|+-++..++.+|. .|..+.+.+
T Consensus        15 ~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          15 EELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            44567789999999999999999999999998 898887764

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.35  E-value=0.018  Score=49.57  Aligned_cols=103  Identities=14%  Similarity=0.022  Sum_probs=61.6

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceE-eCCCCCCccHHHHHHHHh-
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF-LNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~-~~~~~~~~~~~~~~~~~~-  260 (353)
                      +..+.+++++||-+|+| .|..+..+++. |+ +|++++.+++-++.+++    .+.... ........++...-.... 
T Consensus        50 ~~l~~~~~~~vLD~GcG-~G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  126 (292)
T d1xvaa_          50 GLLRQHGCHRVLDVACG-TGVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA  126 (292)
T ss_dssp             HHHHHTTCCEEEESSCT-TSHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC
T ss_pred             HHhhhcCCCEEEEecCC-CcHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCC
Confidence            34455678899999885 46677777765 88 99999999988777654    121110 000000111111112222 


Q ss_pred             cCCccEEEeccCC--------------hHHHHHHHHHhccCCceEEE
Q 018627          261 DGGADYSFECIGD--------------TGMITTALQSCCDGWGLAVT  293 (353)
Q Consensus       261 ~~~~dvv~d~~g~--------------~~~~~~~~~~l~~~~G~~v~  293 (353)
                      .+.||.|+.....              ...+....+.|+|+ |.++.
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence            2389988853211              12578888999997 99886

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.24  E-value=0.11  Score=41.97  Aligned_cols=93  Identities=17%  Similarity=0.166  Sum_probs=60.1

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-EeCCCCCCccHHHHHHHHhcCCcc
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      ++++.+||-+|+| .|..+..+++ .|. +|+++|.+++.++.+++    .+... .+...  ..++     ...++.||
T Consensus        35 l~~~~~ILDiGcG-~G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d--~~~l-----~~~~~~fD  104 (226)
T d1ve3a1          35 MKKRGKVLDLACG-VGGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGD--ARKL-----SFEDKTFD  104 (226)
T ss_dssp             CCSCCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECC--TTSC-----CSCTTCEE
T ss_pred             cCCCCEEEEECCC-cchhhhhHhh-hhc-ccccccccccchhhhhhhhccccccccccccc--cccc-----cccCcCce
Confidence            5788999999986 3667777776 477 89999999998877754    33222 22111  1111     11234799


Q ss_pred             EEEeccCC--------hHHHHHHHHHhccCCceEEEE
Q 018627          266 YSFECIGD--------TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       266 vv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      +|+-.-.-        ...+....+.|+|+ |+++..
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            88864321        12467778899997 998754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.17  E-value=0.046  Score=43.99  Aligned_cols=39  Identities=31%  Similarity=0.430  Sum_probs=35.2

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~  234 (353)
                      ++|.|+|+|.+|...++++...|+ .|+..+++++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            589999999999999999999999 999999999876644

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.15  E-value=0.034  Score=40.66  Aligned_cols=39  Identities=26%  Similarity=0.490  Sum_probs=32.8

Q ss_pred             CCCC-CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627          191 ISKG-STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK  230 (353)
Q Consensus       191 ~~~g-~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~  230 (353)
                      +.++ .+|.|+|+|.+|.++++-|+.+|+ ++++.+.+++.
T Consensus         7 ~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~   46 (111)
T d1kjqa2           7 LRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA   46 (111)
T ss_dssp             TSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred             CCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence            3444 569999999999999999999999 88888876653

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.10  E-value=0.069  Score=43.01  Aligned_cols=90  Identities=24%  Similarity=0.295  Sum_probs=60.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..++++++..|+ +|++.++..... .....+...       ..++.+.++.     .|+|.-++.
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~-------~~~l~~ll~~-----sD~i~~~~p  113 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQR-------VSTLQDLLFH-----SDCVTLHCG  113 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEE-------CSSHHHHHHH-----CSEEEECCC
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhcccc-------ccchhhcccc-----CCEEEEeec
Confidence            58899999999999999999999999 999997754432 222233221       1234444443     677776655


Q ss_pred             Ch-H---H-HHHHHHHhccCCceEEEEcCC
Q 018627          273 DT-G---M-ITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~-~---~-~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      .. .   . -...++.|+++ ..+|.++-.
T Consensus       114 lt~~T~~li~~~~l~~mk~~-a~lIN~sRG  142 (193)
T d1mx3a1         114 LNEHNHHLINDFTVKQMRQG-AFLVNTARG  142 (193)
T ss_dssp             CCTTCTTSBSHHHHTTSCTT-EEEEECSCT
T ss_pred             ccccchhhhhHHHHhccCCC-CeEEecCCc
Confidence            31 1   1 23556788886 888888754

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.05  E-value=0.4  Score=37.73  Aligned_cols=96  Identities=20%  Similarity=0.205  Sum_probs=58.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCCeEEEE-cCCh-hhHHHHHhCCCceEeCCCC----------CCccHHHHHHHHhcC
Q 018627          196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGV-DTNP-EKCEKAKAFGVTEFLNPND----------NNEPVQQVIKRITDG  262 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~-g~~~vi~~-~~~~-~~~~~~~~~G~~~~~~~~~----------~~~~~~~~~~~~~~~  262 (353)
                      +|.|.|-|-+|+.+++.+... .. .++++ +.++ .....+...+.......+.          ....+.+..     .
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence            588999999999999998876 45 67666 3332 3334444444332221110          011121111     1


Q ss_pred             CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          263 GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       263 ~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ++|+|+||+|.....+.+-..+..+ -+++..+...
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G-~KvIi~~~~~  111 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGEK  111 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcC-CEEEEECCCC
Confidence            4899999999866777777888775 6777766543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.04  E-value=0.022  Score=45.40  Aligned_cols=37  Identities=19%  Similarity=0.215  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      .+++|+|+|+|+.|+.++..++.+|++.|+++++++.
T Consensus         3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            3689999999999999999999999955888877654

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=93.98  E-value=0.35  Score=36.92  Aligned_cols=95  Identities=19%  Similarity=0.259  Sum_probs=62.3

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHC--CCCeEEEEcCChh--h-HHHHHhCCCceEeCCCCCCccHHHHH------------
Q 018627          195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNPE--K-CEKAKAFGVTEFLNPNDNNEPVQQVI------------  256 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~--g~~~vi~~~~~~~--~-~~~~~~~G~~~~~~~~~~~~~~~~~~------------  256 (353)
                      ++|.|+|+ |.+|..++.+.+..  .+ +|++......  + .+.+++|....+...+  +.. .+.+            
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d--~~~-~~~l~~~~~~~~~~v~   78 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIAD--PSL-YNDLKEALAGSSVEAA   78 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESC--GGG-HHHHHHHTTTCSSEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceecc--HHH-HHHHHHHhhhcccccc
Confidence            78999999 99999999999886  45 6766644432  2 3455778877765543  111 1121            


Q ss_pred             ------HHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEc
Q 018627          257 ------KRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       257 ------~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                            .+.....+|+++.++.+...+...+.+++.  |.-+.+.
T Consensus        79 ~g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~--gk~iaLA  121 (150)
T d1r0ka2          79 AGADALVEAAMMGADWTMAAIIGCAGLKATLAAIRK--GKTVALA  121 (150)
T ss_dssp             ESHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHT--TSEEEEC
T ss_pred             cCccchheecccccceeeeecCchhHHHHHHHHHhc--CCEEEEe
Confidence                  122223578888887777778888888887  4444443

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=93.96  E-value=0.076  Score=46.27  Aligned_cols=102  Identities=15%  Similarity=0.115  Sum_probs=62.5

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHh--cCCc
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT--DGGA  264 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~--~~~~  264 (353)
                      ..+|++||-.++|. |..++++|+  |+.+|++++.+++.++.+++    .|.+.+-..   ..+..+.++.+.  ++.|
T Consensus       143 ~~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i---~~d~~~~~~~~~~~~~~f  216 (318)
T d1wxxa2         143 RFRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVL---EANAFDLLRRLEKEGERF  216 (318)
T ss_dssp             GCCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEE---ESCHHHHHHHHHHTTCCE
T ss_pred             HhCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCccee---eccHHHHhhhhHhhhcCC
Confidence            35799999997642 233344553  33499999999998887754    565432111   223333333332  3489


Q ss_pred             cEEEeccC-----C----------hHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          265 DYSFECIG-----D----------TGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       265 dvv~d~~g-----~----------~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      |+|+--..     .          ...+..+++.++|+ |.++.+.....
T Consensus       217 D~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs~~  265 (318)
T d1wxxa2         217 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCSHH  265 (318)
T ss_dssp             EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECCTT
T ss_pred             CEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCCcc
Confidence            98875221     1          13456777889997 99999876543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.73  E-value=0.21  Score=41.18  Aligned_cols=82  Identities=22%  Similarity=0.270  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++|+|.|-|.+|..+++++...|+ ++++++.+..+.+.+.. .|+..+ +.   +        ++.....|+++=|
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~~~-~~---~--------~~~~~~cDIl~Pc  103 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADAV-AP---N--------AIYGVTCDIFAPC  103 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEEC-CG---G--------GTTTCCCSEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCccc-CC---c--------ccccccccEeccc
Confidence            469999999999999999999999999 99999998888776644 555432 11   1        1112367888877


Q ss_pred             cCChHHHHHHHHHhcc
Q 018627          271 IGDTGMITTALQSCCD  286 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~  286 (353)
                      .-+...-......++-
T Consensus       104 A~~~~I~~~~~~~l~a  119 (230)
T d1leha1         104 ALGAVLNDFTIPQLKA  119 (230)
T ss_dssp             SCSCCBSTTHHHHCCC
T ss_pred             ccccccChHHhhccCc
Confidence            7543333344445543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.68  E-value=0.049  Score=48.55  Aligned_cols=31  Identities=29%  Similarity=0.393  Sum_probs=27.9

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      |++|||+|+ |-+|..++..+...|. .|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            689999998 8899999999999998 999986

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.66  E-value=0.074  Score=44.94  Aligned_cols=95  Identities=19%  Similarity=0.118  Sum_probs=60.7

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce---EeCCCCCCccHHHHHHHHhcC
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE---FLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~---~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      .+++|++||-.++| +|..++.+|+.-.+ +|++++.+++..+.+++    .|...   ++..+  ..       +....
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~~~~-~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D--~~-------~~~~~  172 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMD--NR-------DFPGE  172 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC--TT-------TCCCC
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHhCCc-EEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcc--hH-------HhccC
Confidence            46899999998764 34444566665444 99999999998887754    34433   23221  11       12223


Q ss_pred             -CccEEEecc--CChHHHHHHHHHhccCCceEEEEcC
Q 018627          263 -GADYSFECI--GDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       263 -~~dvv~d~~--g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                       .+|.|+-..  .....+..++..++++ |.+.....
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~~~  208 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYHNT  208 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEEec
Confidence             789665432  2345688899999997 98765543

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.65  E-value=0.57  Score=36.49  Aligned_cols=100  Identities=22%  Similarity=0.240  Sum_probs=61.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC-CCeEEEE-cCC-hhhHHHHHhCCCceEeCCCCCCccHHH-------HHHHHhcCCcc
Q 018627          196 TVVIFGLGTVGLSVAQGAKARG-ASRIIGV-DTN-PEKCEKAKAFGVTEFLNPNDNNEPVQQ-------VIKRITDGGAD  265 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g-~~~vi~~-~~~-~~~~~~~~~~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~d  265 (353)
                      +|.|.|-|-+|..+++++...+ . .++++ +.+ ......+..++.+......+....+.+       .+.++. .+.|
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~vD   80 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEAD   80 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCS
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-cCCC
Confidence            6889999999999999886664 4 56655 322 344456666665544322210000000       001111 2699


Q ss_pred             EEEeccCChHHHHHHHHHhccCCceEEEEcCCC
Q 018627          266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       266 vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      +|+||+|.....+.+-..+..+ -++|..+...
T Consensus        81 vViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~~  112 (171)
T d1cf2o1          81 IVIDCTPEGIGAKNLKMYKEKG-IKAIFQGGEK  112 (171)
T ss_dssp             EEEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             EEEEccCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            9999999866677777888886 7888776543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.59  E-value=0.65  Score=34.64  Aligned_cols=76  Identities=16%  Similarity=0.274  Sum_probs=42.8

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      +|.|.|+ |-+|..++..+... ++ .+++.-...+......                         ..++|+++|.+..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~d~~~~~~~~~-------------------------~~~~DvvIDFS~p   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAELDAGDPLSLLT-------------------------DGNTEVVIDFTHP   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEECTTCCTHHHH-------------------------TTTCSEEEECCCT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecCCchhhhc-------------------------cccCCEEEEcccH
Confidence            5889997 99999988877654 66 5554422212112211                         2256777776643


Q ss_pred             hHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          274 TGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       274 ~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                       +.....++.+... |.=+.+|.++-
T Consensus        55 -~~~~~~~~~~~~~-~~~~ViGTTG~   78 (135)
T d1yl7a1          55 -DVVMGNLEFLIDN-GIHAVVGTTGF   78 (135)
T ss_dssp             -TTHHHHHHHHHHT-TCEEEECCCCC
T ss_pred             -HHHHHHHHHHHhc-CCCEEEecccc
Confidence             3444444444443 55556665543

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.56  E-value=0.089  Score=40.25  Aligned_cols=33  Identities=24%  Similarity=0.375  Sum_probs=29.5

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      -.|++|||+|+|.+|..-+..+...|+ +|+++.
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVva   43 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVS   43 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEE
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEe
Confidence            368999999999999999999999999 888773

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=93.55  E-value=0.029  Score=38.15  Aligned_cols=34  Identities=24%  Similarity=0.403  Sum_probs=29.9

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      ++|.|+|+|.+|.++++-++.+|+ ++.+.+.+++
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSC
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCC
Confidence            578999999999999999999999 8888876544

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.52  E-value=0.019  Score=46.36  Aligned_cols=99  Identities=13%  Similarity=0.080  Sum_probs=61.6

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCc--eE-eCCCCCCccHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT--EF-LNPNDNNEPVQQVIK  257 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~--~~-~~~~~~~~~~~~~~~  257 (353)
                      |.+.....++++||-+|+| .|..++.+++ .+. +|++++.++...+.+++    .+..  .+ +...    ++.+   
T Consensus        44 Li~~l~~~~~~~VLDiGcG-~G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~----d~~~---  113 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCG-YGVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHS----DLYE---  113 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCT-TSHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC----STTT---
T ss_pred             HHHhCCcCCCCeEEEEeec-CChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEc----chhh---
Confidence            4466778899999999875 3455555554 455 89999999988877753    3332  11 1111    1111   


Q ss_pred             HHhcCCccEEEeccC---C----hHHHHHHHHHhccCCceEEEE
Q 018627          258 RITDGGADYSFECIG---D----TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g---~----~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ...++.||+|+-...   .    ...+..+.+.|+++ |+++.+
T Consensus       114 ~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         114 NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence            112348999996322   1    23467777889997 987654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.52  E-value=0.13  Score=40.86  Aligned_cols=90  Identities=28%  Similarity=0.346  Sum_probs=62.0

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|+++.|+|.|.+|..++++++..|. +|++.++...+.... ..+..        ..++.+.+++     .|+|.-++.
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~~-~~~~~--------~~~l~ell~~-----sDiv~~~~P  107 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARAA-QLGIE--------LLSLDDLLAR-----ADFISVHLP  107 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHHH-HHTCE--------ECCHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHHh-hcCce--------eccHHHHHhh-----CCEEEEcCC
Confidence            57899999999999999999999999 999998765544333 23322        1234444443     788887765


Q ss_pred             ChH----HH-HHHHHHhccCCceEEEEcCCC
Q 018627          273 DTG----MI-TTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       273 ~~~----~~-~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      ...    .+ ...++.|+++ ..+|.++-..
T Consensus       108 lt~~T~~lin~~~l~~mk~~-a~lIN~sRG~  137 (184)
T d1ygya1         108 KTPETAGLIDKEALAKTKPG-VIIVNAARGG  137 (184)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECSCTT
T ss_pred             CCchhhhhhhHHHHhhhCCC-ceEEEecchh
Confidence            321    12 4566788886 8888887543

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.51  E-value=0.083  Score=39.04  Aligned_cols=41  Identities=20%  Similarity=0.310  Sum_probs=34.5

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +...-..+++|+|+|+|.+|+-+++.++.+|. +|..+++.+
T Consensus        23 ~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            34444567899999999999999999999999 899987654

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=93.49  E-value=0.54  Score=36.72  Aligned_cols=137  Identities=12%  Similarity=0.053  Sum_probs=78.8

Q ss_pred             EEEEEcCChHHHH-HHHHHHHCCCC-eEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          196 TVVIFGLGTVGLS-VAQGAKARGAS-RII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       196 ~vLV~Gag~vG~~-a~~la~~~g~~-~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +|.|+|+|.+|.- .+...+...-. +++ ++++++++.+.+ ++++...+.      .++.+.+.   ...+|+|+-|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~ell~---~~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEELLE---SGLVDAVDLTL   75 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHHHHH---SSCCSEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeecccc---ccccceeeccc
Confidence            6789999999864 46666654321 555 457777776654 557765543      23444433   23799999998


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcCCCCCCceec-chhhhhc--CcEE-EeeecCCCCCCCcHHHHHHHHHcCCCC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAA-HYGLFLS--GRTL-KGSLFGGWKPKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~~--~~~i-~g~~~~~~~~~~~~~~~~~~l~~g~i~  343 (353)
                      ......+.+..++..  |.=|.+.-+-....-.. ....+.+  +..+ .+...........+.++.+++++|++.
T Consensus        76 p~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~ig  149 (181)
T d1zh8a1          76 PVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKPN  149 (181)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCCC
T ss_pred             ccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCCc
Confidence            877777777777776  55566643322111111 1112222  3333 333221110124577899999999874

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.42  E-value=0.015  Score=47.06  Aligned_cols=92  Identities=18%  Similarity=0.245  Sum_probs=58.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCceE--eCCCCCCccHHHHHHHHhcCCccE
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~~--~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      ++.+||-+|+| .|..+..+++ .|+ +|++++.+++.++.+++    .|.+.+  ...+.....        ..+.||+
T Consensus        30 ~~grvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~--------~~~~fD~   98 (198)
T d2i6ga1          30 APGRTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT--------FDGEYDF   98 (198)
T ss_dssp             CSCEEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC--------CCCCEEE
T ss_pred             CCCcEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccccc--------ccccccE
Confidence            34489999986 6777777765 488 99999999988876643    454432  111100101        1347999


Q ss_pred             EEeccC-----C---hHHHHHHHHHhccCCceEEEEcC
Q 018627          267 SFECIG-----D---TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       267 v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      |+...-     .   ...+....+.++++ |.++....
T Consensus        99 I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~~  135 (198)
T d2i6ga1          99 ILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVAA  135 (198)
T ss_dssp             EEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            886321     1   13566777889997 99887643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.37  E-value=0.095  Score=41.32  Aligned_cols=49  Identities=27%  Similarity=0.251  Sum_probs=36.9

Q ss_pred             HHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627          184 AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       184 al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~  234 (353)
                      +|.+...--+|++|||+|+|+.+.+++..+...  .+|.+..|+.++.+.+
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~--~~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           8 ALEEEIGRVKDKNIVIYGAGGAARAVAFELAKD--NNIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSS--SEEEEECSSHHHHHHH
T ss_pred             HHHHhCCCcCCCEEEEECCcHHHHHHHHHHccc--cceeeehhhhhHHHHH
Confidence            343433345789999999999999887766443  4899999999887765

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.35  E-value=0.16  Score=44.13  Aligned_cols=77  Identities=12%  Similarity=0.095  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHH-HHhC---CCceEeCCCCCCccHHHHHHHHhcC-CccE
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAF---GVTEFLNPNDNNEPVQQVIKRITDG-GADY  266 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~-~~~~---G~~~~~~~~~~~~~~~~~~~~~~~~-~~dv  266 (353)
                      .|++|||+|+ |-+|..+++.+...|. .|+++++++.+... ++..   .....+..+-.+.   +.+.+.... .+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~---~~l~~~~~~~~~~~   82 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ---NKLLESIREFQPEI   82 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH---HHHHHHHHHHCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeeccCh---Hhhhhhhhhchhhh
Confidence            5799999998 8899999999999999 89999887754322 2221   1112221111122   222222223 6899


Q ss_pred             EEeccCC
Q 018627          267 SFECIGD  273 (353)
Q Consensus       267 v~d~~g~  273 (353)
                      ++.+++.
T Consensus        83 v~~~aa~   89 (356)
T d1rkxa_          83 VFHMAAQ   89 (356)
T ss_dssp             EEECCSC
T ss_pred             hhhhhcc
Confidence            9998874

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.32  E-value=0.07  Score=39.15  Aligned_cols=39  Identities=15%  Similarity=0.174  Sum_probs=33.7

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .+++..++|+|+|+|.+|.-++..++.+|. +|..+.+.+
T Consensus        17 ~~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          17 FNIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TTCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             hccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            345567899999999999999999999999 999997754

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=93.28  E-value=0.097  Score=45.54  Aligned_cols=72  Identities=15%  Similarity=0.093  Sum_probs=44.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC----ChhhHHHHHh---CCCceE-eCCCCCCccHHHHHHHHhc-CCcc
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDT----NPEKCEKAKA---FGVTEF-LNPNDNNEPVQQVIKRITD-GGAD  265 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~----~~~~~~~~~~---~G~~~~-~~~~~~~~~~~~~~~~~~~-~~~d  265 (353)
                      +|||+|+ |-+|..++..+...|. .|+++++    ........+.   -.+..+ .|..    +. +.+.+... .++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----d~-~~l~~~~~~~~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR----NE-ALMTEILHDHAID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTT----CH-HHHHHHHHHTTCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecC----CH-HHHHHHHhccCCC
Confidence            6999998 8899999999999998 8988864    2222232222   223322 1222    22 23333332 3799


Q ss_pred             EEEeccCC
Q 018627          266 YSFECIGD  273 (353)
Q Consensus       266 vv~d~~g~  273 (353)
                      +||.+++.
T Consensus        76 ~ViHlAa~   83 (338)
T d1udca_          76 TVIHFAGL   83 (338)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCc
Confidence            99998753

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.23  E-value=0.041  Score=46.20  Aligned_cols=34  Identities=24%  Similarity=0.391  Sum_probs=30.8

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +++|+|+|+|.-|++++..++..|. +|++++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            5889999999999999999999999 999998653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=93.20  E-value=0.17  Score=39.42  Aligned_cols=76  Identities=17%  Similarity=0.324  Sum_probs=57.1

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.|++|+|+|- ..+|.-++.++...|+ +|+.+.+.                     ..++.+.+++     .|+++-+
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~---------------------t~~l~~~~~~-----ADivI~a   87 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRF---------------------TKNLRHHVEN-----ADLLIVA   87 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSS---------------------CSCHHHHHHH-----CSEEEEC
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhc-cccccccc---------------------cchhHHHHhh-----hhHhhhh
Confidence            46999999997 6799999999999999 88877432                     2234444443     8999999


Q ss_pred             cCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          271 IGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       271 ~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +|.+..+..  +.++++ ..++.+|..
T Consensus        88 ~G~p~~i~~--~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          88 VGKPGFIPG--DWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             SCCTTCBCT--TTSCTT-CEEEECCCE
T ss_pred             ccCcccccc--cccCCC-cEEEecCce
Confidence            998765543  467886 888888864

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.19  E-value=0.14  Score=42.05  Aligned_cols=102  Identities=15%  Similarity=0.178  Sum_probs=66.8

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHH---
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRI---  259 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~---  259 (353)
                      ..+....++||=+|.+ .|..++.+|+++. -.+|+.++.+++..+.+++    .|....+...  ..+..+.+.+.   
T Consensus        54 L~~~~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~--~Gda~e~l~~~~~~  130 (219)
T d2avda1          54 LARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLR--LKPALETLDELLAA  130 (219)
T ss_dssp             HHHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHHT
T ss_pred             HHHccCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEE--Eeehhhcchhhhhh
Confidence            3455677899999864 5788888888763 1399999999998776644    4654422222  23334444333   


Q ss_pred             -hcCCccEEEeccCCh---HHHHHHHHHhccCCceEEE
Q 018627          260 -TDGGADYSFECIGDT---GMITTALQSCCDGWGLAVT  293 (353)
Q Consensus       260 -~~~~~dvv~d~~g~~---~~~~~~~~~l~~~~G~~v~  293 (353)
                       ..+.||.||--....   ..++.+++.++++ |.++.
T Consensus       131 ~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~  167 (219)
T d2avda1         131 GEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAV  167 (219)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEE
T ss_pred             cccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEE
Confidence             234799888654432   3467888999996 77765

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.15  E-value=0.14  Score=40.86  Aligned_cols=91  Identities=13%  Similarity=0.035  Sum_probs=61.1

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+.++.|+|.|.+|...+++++..|. +|+..++........++.+....       .++.+.++     ..|+|.-++.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~-------~~l~~~l~-----~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATREDMYP-----VCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHGG-----GCSEEEECSC
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc-------CCHHHHHH-----hccchhhccc
Confidence            57899999999999999999999999 99999876655555555443221       22232322     3677776554


Q ss_pred             ChH-----HHHHHHHHhccCCceEEEEcCC
Q 018627          273 DTG-----MITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       273 ~~~-----~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      ...     .-...++.|+++ ..+|.++-.
T Consensus       110 lt~~T~~li~~~~l~~mk~g-a~lIN~aRG  138 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRG-AYIVNTARG  138 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSCG
T ss_pred             ccccchhhhHHHHHHhCCCC-CEEEecCch
Confidence            211     124556778875 777777643

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.10  E-value=0.063  Score=43.05  Aligned_cols=84  Identities=14%  Similarity=0.180  Sum_probs=56.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceE----eCCCC---CCccHHHHHHHHhcCCccEE
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF----LNPND---NNEPVQQVIKRITDGGADYS  267 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~----~~~~~---~~~~~~~~~~~~~~~~~dvv  267 (353)
                      .+|.|+|+|..|.+++.++...|. .|...+++++..+.+.+-+-...    +...+   ...++.+.+.     ..|++
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~i   81 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEII   81 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCE
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC-----CCCEE
Confidence            469999999999999999988887 89999999999888865331110    00000   0123333332     47999


Q ss_pred             EeccCChHHHHHHHHHhc
Q 018627          268 FECIGDTGMITTALQSCC  285 (353)
Q Consensus       268 ~d~~g~~~~~~~~~~~l~  285 (353)
                      +-++.. ..++..++.+.
T Consensus        82 iiavPs-~~~~~~~~~~~   98 (189)
T d1n1ea2          82 LFVIPT-QFLRGFFEKSG   98 (189)
T ss_dssp             EECSCH-HHHHHHHHHHC
T ss_pred             EEcCcH-HHHHHHHHHHH
Confidence            999975 55666665543

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.07  E-value=0.054  Score=44.98  Aligned_cols=35  Identities=17%  Similarity=0.279  Sum_probs=31.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ..++|+|+|+|+.|++++..++..|. +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            35789999999999999999999999 999998754

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.06  E-value=0.074  Score=41.77  Aligned_cols=38  Identities=26%  Similarity=0.374  Sum_probs=33.4

Q ss_pred             EEEEEc-CChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627          196 TVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       196 ~vLV~G-ag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~  234 (353)
                      +|.|+| +|.+|.++++.+...|+ +|++.+|++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            578884 59999999999999999 899999999887766

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.99  E-value=0.051  Score=40.24  Aligned_cols=34  Identities=15%  Similarity=0.095  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      ..++++|+|+|.+|.-++++++.+|. +|..+.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            34789999999999999999999999 77777654

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.90  E-value=0.48  Score=36.83  Aligned_cols=96  Identities=19%  Similarity=0.176  Sum_probs=55.4

Q ss_pred             cCCCCCEEEEEcC--ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-EeCCCCCCccHHHHHHHHhcC
Q 018627          190 DISKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       190 ~~~~g~~vLV~Ga--g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      .+..|.+||=.++  |.+|.   . |...|+ ++++++.+++..+.+++    .|... +....   .+.........++
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~~~~~~~~~~~  109 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VEVFLPEAKAQGE  109 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HHHHHHHHHHTTC
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeee---hhcccccccccCC
Confidence            4678999998865  54554   3 334588 88899999998877643    55543 43332   2221111222344


Q ss_pred             CccEEEec----cCChHHHHHHHH--HhccCCceEEEE
Q 018627          263 GADYSFEC----IGDTGMITTALQ--SCCDGWGLAVTL  294 (353)
Q Consensus       263 ~~dvv~d~----~g~~~~~~~~~~--~l~~~~G~~v~~  294 (353)
                      .||+||-.    .+....+...+.  .++++ |.++.-
T Consensus       110 ~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivie  146 (171)
T d1ws6a1         110 RFTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVLQ  146 (171)
T ss_dssp             CEEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEEE
T ss_pred             ccceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEEE
Confidence            89999842    222334444433  47775 766643

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.82  E-value=0.16  Score=43.95  Aligned_cols=103  Identities=19%  Similarity=0.220  Sum_probs=56.4

Q ss_pred             HHHH-HHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHH---HHHhCCCce---EeCCCCCCccH
Q 018627          180 AGLG-AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE---KAKAFGVTE---FLNPNDNNEPV  252 (353)
Q Consensus       180 ta~~-al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~---~~~~~G~~~---~~~~~~~~~~~  252 (353)
                      .+|. ++.+...+.+|++||-+|+|. |...+.+|+ +|+++|++++.++.-..   .+++.+...   ++..+  ..++
T Consensus        19 ~~y~~ai~~~~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~--~~~~   94 (316)
T d1oria_          19 LTYRNSMFHNRHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGK--VEEV   94 (316)
T ss_dssp             HHHHHHHHTCHHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESC--TTTC
T ss_pred             HHHHHHHHhccccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEecc--HHHc
Confidence            3443 333333456899999999863 555554444 68879999998864322   223334322   22111  1111


Q ss_pred             HHHHHHHhcCCccEEEecc-CC--------hHHHHHHHHHhccCCceEE
Q 018627          253 QQVIKRITDGGADYSFECI-GD--------TGMITTALQSCCDGWGLAV  292 (353)
Q Consensus       253 ~~~~~~~~~~~~dvv~d~~-g~--------~~~~~~~~~~l~~~~G~~v  292 (353)
                           ....+.+|+|+... +.        +..+...-+.|+|+ |+++
T Consensus        95 -----~~~~~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_          95 -----ELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             -----CCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             -----ccccceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence                 11123799887522 21        22344455789997 9876

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=92.80  E-value=0.069  Score=47.03  Aligned_cols=33  Identities=21%  Similarity=0.354  Sum_probs=28.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +.|||+|+ |-+|..++..+...|. .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57899998 8899999999999998 999998854

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=92.71  E-value=0.19  Score=43.73  Aligned_cols=37  Identities=22%  Similarity=0.187  Sum_probs=29.5

Q ss_pred             CCEEEEEcC---ChHHHHHHHHHHHCCCCeEEEEcCChhhH
Q 018627          194 GSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKC  231 (353)
Q Consensus       194 g~~vLV~Ga---g~vG~~a~~la~~~g~~~vi~~~~~~~~~  231 (353)
                      ++..||+|+   .++|.+.++.+...|+ +|+.+.++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhh
Confidence            566799994   3899999999999999 888887665543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.70  E-value=0.46  Score=32.72  Aligned_cols=66  Identities=18%  Similarity=0.343  Sum_probs=46.5

Q ss_pred             CEEEEEcCChHHHH-HHHHHHHCCCCeEEEEcCCh-hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          195 STVVIFGLGTVGLS-VAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       195 ~~vLV~Gag~vG~~-a~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+|-++|-|++|.. ++++++..|+ .|.+.|..+ +..+.++++|+.-.....  ..++         ..+|+|+-+..
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~--~~~i---------~~~d~vV~SsA   69 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHS--ADNW---------YDPDLVIKTPA   69 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCC--TTSC---------CCCSEEEECTT
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeec--cccc---------CCCCEEEEecC
Confidence            45777788778864 4788899999 999999887 556678899986543322  2221         25788877655

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.62  E-value=0.075  Score=42.23  Aligned_cols=37  Identities=27%  Similarity=0.458  Sum_probs=33.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ...+++|+|+|+|+.|+.++..+...|. +|+..+.++
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            4557899999999999999999999999 999998765

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=92.62  E-value=0.31  Score=40.92  Aligned_cols=95  Identities=17%  Similarity=0.125  Sum_probs=64.0

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHhCCCc-eEeCCCCCCccHHHHHHHHhcCCccEEE
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYSF  268 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~dvv~  268 (353)
                      ..++.+||-+|+| .|..+..+++.. +. +++++|.+++-++.+++.... ..+..+  ..++     .+.++.||+|+
T Consensus        82 ~~~~~~iLDiGcG-~G~~~~~l~~~~~~~-~~~giD~s~~~~~~a~~~~~~~~~~~~d--~~~l-----~~~~~sfD~v~  152 (268)
T d1p91a_          82 DDKATAVLDIGCG-EGYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVAS--SHRL-----PFSDTSMDAII  152 (268)
T ss_dssp             CTTCCEEEEETCT-TSTTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECC--TTSC-----SBCTTCEEEEE
T ss_pred             CCCCCEEEEeCCC-CcHHHHHHHHHCCCC-EEEEecchHhhhhhhhcccccccceeee--hhhc-----cCCCCCEEEEe
Confidence            4677899999875 466666777765 55 899999999998888763322 222111  1110     11234799999


Q ss_pred             eccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          269 ECIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       269 d~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .... +..+.+..+.|+|+ |+++....
T Consensus       153 ~~~~-~~~~~e~~rvLkpg-G~l~~~~p  178 (268)
T d1p91a_         153 RIYA-PCKAEELARVVKPG-GWVITATP  178 (268)
T ss_dssp             EESC-CCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             ecCC-HHHHHHHHHHhCCC-cEEEEEee
Confidence            6544 46688899999997 99988753

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.54  E-value=0.15  Score=43.63  Aligned_cols=98  Identities=15%  Similarity=0.163  Sum_probs=64.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC--------ceE-eCCCCCCccHHHHHHHHhcC
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--------TEF-LNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~--------~~~-~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ...++|||+|+| -|..+-.+++..+.++|.+++.+++-.+.++++-.        ..+ +.    ..+-.+.+++...+
T Consensus        79 ~~pk~VLiiGgG-~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~----~~Da~~~l~~~~~~  153 (290)
T d1xj5a_          79 PNPKKVLVIGGG-DGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV----IGDGVAFLKNAAEG  153 (290)
T ss_dssp             SCCCEEEEETCS-SSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE----ESCHHHHHHTSCTT
T ss_pred             CCCcceEEecCC-chHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEE----EccHHHHHhhcccc
Confidence            455899999864 24445567777777799999999999998877421        111 11    12344556554445


Q ss_pred             CccEEEe-ccC---------ChHHHHHHHHHhccCCceEEEEc
Q 018627          263 GADYSFE-CIG---------DTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       263 ~~dvv~d-~~g---------~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .+|+|+- ...         ..+.++...+.|+++ |.++.-.
T Consensus       154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  195 (290)
T d1xj5a_         154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQA  195 (290)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEec
Confidence            8997764 322         135678888999997 9988654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.48  E-value=0.37  Score=33.73  Aligned_cols=72  Identities=18%  Similarity=0.269  Sum_probs=50.0

Q ss_pred             cCCCCCEEEEEcCChHHHHH-HHHHHHCCCCeEEEEcCCh-hhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEE
Q 018627          190 DISKGSTVVIFGLGTVGLSV-AQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYS  267 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a-~~la~~~g~~~vi~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv  267 (353)
                      .++..++|.++|-|++|..+ +++++..|+ .|.+.|... ...+.+++.|+.-...+.  ....         .+.|+|
T Consensus         4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~--~~~i---------~~~d~v   71 (96)
T d1p3da1           4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHA--EEHI---------EGASVV   71 (96)
T ss_dssp             CCTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCC--GGGG---------TTCSEE
T ss_pred             cchhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCc--cccC---------CCCCEE
Confidence            45677899999987788655 899999999 999998763 445566778876544333  1111         257877


Q ss_pred             EeccCC
Q 018627          268 FECIGD  273 (353)
Q Consensus       268 ~d~~g~  273 (353)
                      +-+.+-
T Consensus        72 V~S~AI   77 (96)
T d1p3da1          72 VVSSAI   77 (96)
T ss_dssp             EECTTS
T ss_pred             EECCCc
Confidence            766553

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.46  E-value=0.21  Score=40.14  Aligned_cols=112  Identities=19%  Similarity=0.227  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .|++|.|+|.|.+|..++++++..|+ +|++.++...+..       ...+.    ..++.+.++.     .|++.-++.
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~-------~~~~~----~~~l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGD-------HPDFD----YVSLEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSC-------CTTCE----ECCHHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhh-------hcchh----HHHHHHHHHh-----cccceeeec
Confidence            47899999999999999999999999 9999987543310       00000    1234444443     677777665


Q ss_pred             Ch-H----HHHHHHHHhccCCceEEEEcCCCCCCceecchhhhhcCcEEEeeecCCC
Q 018627          273 DT-G----MITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW  324 (353)
Q Consensus       273 ~~-~----~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  324 (353)
                      .. .    .-...+..|+++ ..+|.++-..- .+. -.....+++..+.|...--|
T Consensus       107 lt~~T~~li~~~~l~~mk~~-a~lIN~aRG~v-vde-~aL~~aL~~g~i~ga~lDV~  160 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPG-AIVINTARPNL-IDT-QAMLSNLKSGKLAGVGIDTY  160 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTT-EEEEECSCTTS-BCH-HHHHHHHHTTSEEEEEESSC
T ss_pred             ccccccccccHHHhhccCCc-eEEEecccHhh-hhh-HHHHHHHhcCCcceEecccc
Confidence            32 1    125667889997 88898875432 211 12223345556666554443

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.40  E-value=0.099  Score=43.75  Aligned_cols=32  Identities=22%  Similarity=0.469  Sum_probs=28.5

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +|||+|+ |-+|..++..++..|. .|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            5999998 8999999999999999 999997753

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=92.39  E-value=0.073  Score=42.49  Aligned_cols=39  Identities=23%  Similarity=0.406  Sum_probs=34.6

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~  234 (353)
                      ++|.|+|+|.+|...+.++...|+ +|+..+.+++.++.+
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            579999999999999999999999 999999999876654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.32  E-value=0.06  Score=44.38  Aligned_cols=36  Identities=28%  Similarity=0.387  Sum_probs=31.7

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK  230 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~  230 (353)
                      .+++||+|+ +++|.+.++.+...|+ +|+.+++++++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            367899988 8999999999999999 99999888765

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.31  E-value=0.27  Score=42.67  Aligned_cols=73  Identities=12%  Similarity=0.146  Sum_probs=44.5

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh----hh---HHHHHhCCCceEe-CCCCCCccHHHHHHHHhcC-Cc
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EK---CEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDG-GA  264 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~----~~---~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~-~~  264 (353)
                      +.|||+|+ |-+|..++..+...|. +|+++++..    +.   .+....-+...+. |..  +   .+.+...... ++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d---~~~l~~~~~~~~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC--D---RKGLEKVFKEYKI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTT--C---HHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEECCCCcchhHHHhHHhhcccCCeEEEeecC--C---HHHHHHHHhccCC
Confidence            56899998 8899999999999998 898885421    11   1222223333222 222  1   1233332223 79


Q ss_pred             cEEEeccCC
Q 018627          265 DYSFECIGD  273 (353)
Q Consensus       265 dvv~d~~g~  273 (353)
                      |+||.+++.
T Consensus        76 d~VihlAa~   84 (347)
T d1z45a2          76 DSVIHFAGL   84 (347)
T ss_dssp             CEEEECCSC
T ss_pred             CEEEEcccc
Confidence            999998764

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.29  E-value=0.11  Score=44.96  Aligned_cols=32  Identities=19%  Similarity=0.294  Sum_probs=29.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      +++||+|+ |-+|..++..+...|. .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            57999998 8999999999999999 99999874

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.27  E-value=0.1  Score=37.96  Aligned_cols=36  Identities=17%  Similarity=0.343  Sum_probs=31.5

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      ..++++|+|+|.+|.-+++.+..+|. +|..+.+.+.
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence            35889999999999999999999999 8988876653

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.23  E-value=0.087  Score=46.25  Aligned_cols=75  Identities=21%  Similarity=0.286  Sum_probs=46.3

Q ss_pred             CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          192 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       192 ~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      +.+.+|||+|+ |-+|..++..+...|. .|+++++...... ........+...+  -.+...... .. .++|.|+.+
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~-~~~~~~~~~~~~D--~~~~~~~~~-~~-~~~d~Vih~   86 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHM-TEDMFCDEFHLVD--LRVMENCLK-VT-EGVDHVFNL   86 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSS-CGGGTCSEEEECC--TTSHHHHHH-HH-TTCSEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccch-hhhcccCcEEEee--chhHHHHHH-Hh-hcCCeEeec
Confidence            46889999998 9999999999999998 8998865443211 1112222222221  122322222 22 369999997


Q ss_pred             cC
Q 018627          271 IG  272 (353)
Q Consensus       271 ~g  272 (353)
                      ++
T Consensus        87 a~   88 (363)
T d2c5aa1          87 AA   88 (363)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.18  E-value=1.3  Score=38.47  Aligned_cols=109  Identities=25%  Similarity=0.369  Sum_probs=68.7

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCCCC-----------------
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNPND-----------------  247 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~~~-----------------  247 (353)
                      +...+++++.|+.-++|..|.+++..|+.+|++-++.+  ..+++|.+.++.+|++-+.....                 
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~  169 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK  169 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence            33456677776666779999999999999999544444  44557888999999975542110                 


Q ss_pred             -------------CCcc-------HHHHHHHHhcCCccEEEeccCChHHHHH---HHHHhccCCceEEEEcC
Q 018627          248 -------------NNEP-------VQQVIKRITDGGADYSFECIGDTGMITT---ALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       248 -------------~~~~-------~~~~~~~~~~~~~dvv~d~~g~~~~~~~---~~~~l~~~~G~~v~~g~  296 (353)
                                   ...+       ....+.+..++.+|.+|-++|+..++..   .++...++ -+++.+..
T Consensus       170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~vep  240 (355)
T d1jbqa_         170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVDP  240 (355)
T ss_dssp             HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeecc
Confidence                         0000       1112222234478999999987555444   34455555 67776654

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.15  E-value=0.061  Score=47.01  Aligned_cols=97  Identities=24%  Similarity=0.247  Sum_probs=53.3

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCce---EeCCCCCCccHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIK  257 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~---~~~~~~~~~~~~~~~~  257 (353)
                      +.+.....+|++||-+|+| .|..++ +|...|+++|++++.++. .+.+    ++.+...   ++..+  ..++     
T Consensus        30 I~~~~~~~~~~~VLDlGcG-tG~ls~-~aa~~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~--~~~l-----   99 (328)
T d1g6q1_          30 IIQNKDLFKDKIVLDVGCG-TGILSM-FAAKHGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGK--LEDV-----   99 (328)
T ss_dssp             HHHHHHHHTTCEEEEETCT-TSHHHH-HHHHTCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESC--TTTS-----
T ss_pred             HHhccccCCcCEEEEeCCC-CCHHHH-HHHHhCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEee--hhhc-----
Confidence            3333455689999999986 354444 344468889999998862 2322    3344322   22111  1111     


Q ss_pred             HHhcCCccEEEeccC-----C----hHHHHHHHHHhccCCceEE
Q 018627          258 RITDGGADYSFECIG-----D----TGMITTALQSCCDGWGLAV  292 (353)
Q Consensus       258 ~~~~~~~dvv~d~~g-----~----~~~~~~~~~~l~~~~G~~v  292 (353)
                      .+.++.+|+|+...-     .    ...+...-+.|+|+ |+++
T Consensus       100 ~~~~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         100 HLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             CCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             cCcccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            112348999876321     1    12233334689997 8875

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.14  E-value=0.071  Score=44.81  Aligned_cols=41  Identities=12%  Similarity=0.127  Sum_probs=33.1

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHH---CCCCeEEEEcCChhhHHHH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKA---RGASRIIGVDTNPEKCEKA  234 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~---~g~~~vi~~~~~~~~~~~~  234 (353)
                      .|+.+||+|+ +++|.++++.+..   .|+ +|+.+++++++++.+
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~   49 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL   49 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence            5777888888 8999988775542   588 999999999987765

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=92.10  E-value=0.37  Score=41.62  Aligned_cols=101  Identities=16%  Similarity=0.074  Sum_probs=63.9

Q ss_pred             ccCCCCCEEEEEcC--ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCC--ce--EeCCCCCCccHHHHHHH
Q 018627          189 ADISKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV--TE--FLNPNDNNEPVQQVIKR  258 (353)
Q Consensus       189 ~~~~~g~~vLV~Ga--g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~--~~--~~~~~~~~~~~~~~~~~  258 (353)
                      ..+.+|++||-..+  |++++.    |...|++.|+.++.++..++.+++    -|.  ..  ++     ..+..+.++.
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i-----~~d~~~~l~~  210 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLV-----VMDVFDYFKY  210 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEE-----ESCHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEE-----EccHHHHHHH
Confidence            35678999999854  555543    234688789999999988887754    232  21  22     1233344443


Q ss_pred             Hh--cCCccEEEeccCC---------------hHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          259 IT--DGGADYSFECIGD---------------TGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       259 ~~--~~~~dvv~d~~g~---------------~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      ..  ++.||+|+---+.               ...+..++++++|+ |.++.+.+...
T Consensus       211 ~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs~~  267 (317)
T d2b78a2         211 ARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNAAN  267 (317)
T ss_dssp             HHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECCTT
T ss_pred             HHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCCcc
Confidence            32  3389987742111               13567788899997 99998876543

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=92.03  E-value=0.39  Score=41.32  Aligned_cols=97  Identities=14%  Similarity=0.140  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCc----------eEeCCCCCCccHHHHHHHHhc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT----------EFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~----------~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      ...++|||+|+|. |..+-.+++....++|.+++.+++-.+.++++-..          .++     ..+..+.+++ ..
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~-----i~Da~~~l~~-~~  177 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF-----CGDGFEFLKN-HK  177 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE-----CSCHHHHHHH-CT
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEE-----EchHHHHHHh-CC
Confidence            4568999998642 44455677777767999999999999999884211          111     1234455654 44


Q ss_pred             CCccEEEeccCC----------hHHHHHHHHHhccCCceEEEEcC
Q 018627          262 GGADYSFECIGD----------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       262 ~~~dvv~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +.||+|+--+..          .+.++...+.|+++ |.++.-+.
T Consensus       178 ~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         178 NEFDVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             TCEEEEEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            589988853221          24466777899997 99887653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=92.03  E-value=0.045  Score=44.90  Aligned_cols=98  Identities=13%  Similarity=0.167  Sum_probs=61.6

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHH---CCCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKA---RGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~---~g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      .++++.+||-+|+| .|..+..+++.   .++ +|+++|.+++-++.+++    .+....+...  ..+.    .....+
T Consensus        36 ~~~~~~~vLDlGCG-tG~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~--~~d~----~~~~~~  107 (225)
T d1im8a_          36 FVTADSNVYDLGCS-RGAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEIL--CNDI----RHVEIK  107 (225)
T ss_dssp             HCCTTCEEEEESCT-TCHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEE--CSCT----TTCCCC
T ss_pred             hcCCCCEEEEeccc-hhhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhc--cchh----hccccc
Confidence            36889999999985 46666666664   477 99999999998888765    2322211110  0010    111223


Q ss_pred             CccEEEeccCC--------hHHHHHHHHHhccCCceEEEEcC
Q 018627          263 GADYSFECIGD--------TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       263 ~~dvv~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+|+++-+...        ...++...+.|+|+ |.++....
T Consensus       108 ~~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~~  148 (225)
T d1im8a_         108 NASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSEK  148 (225)
T ss_dssp             SEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeecccc
Confidence            56766653221        24578888999997 99998643

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.02  E-value=0.5  Score=35.83  Aligned_cols=40  Identities=33%  Similarity=0.497  Sum_probs=33.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhH
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKC  231 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~  231 (353)
                      ..+.+|.|+|+|.+|..++..+...+. .+++.+|.++++.
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~   44 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKA   44 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccc
Confidence            456789999999999998888877764 5799999988773

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=91.98  E-value=0.54  Score=36.14  Aligned_cols=131  Identities=12%  Similarity=0.096  Sum_probs=77.5

Q ss_pred             EEEEEcCChHHHH-HHHHHHHC-CCCeEEEEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          196 TVVIFGLGTVGLS-VAQGAKAR-GASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       196 ~vLV~Gag~vG~~-a~~la~~~-g~~~vi~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +|.|+|+|.+|.. .+...+.. +. .+++++.++++.+.+ ++++....+.      ++.+.+    ...+|+|+-|+.
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~------~~~~ll----~~~iD~V~I~tp   71 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATCT------DYRDVL----QYGVDAVMIHAA   71 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCCS------STTGGG----GGCCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhcccccccc------cHHHhc----ccccceeccccc
Confidence            5789999999864 55566555 55 777888888877766 4477654321      111122    125999999998


Q ss_pred             ChHHHHHHHHHhccCCceEEEEcCCCCCCcee-cchhhhhc--CcEE-EeeecCCCCCCCcHHHHHHHHHcCCCC
Q 018627          273 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-AHYGLFLS--GRTL-KGSLFGGWKPKTDLPSLVNRYLKKVRN  343 (353)
Q Consensus       273 ~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~--~~~i-~g~~~~~~~~~~~~~~~~~~l~~g~i~  343 (353)
                      .....+.+..++..  |.=|.+.-+-....-. .....+.+  +..+ .++  ..+  ...+.++++....|++.
T Consensus        72 ~~~H~~~~~~al~~--gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~--~r~--~~~~~~~~~~~~~G~ig  140 (167)
T d1xeaa1          72 TDVHSTLAAFFLHL--GIPTFVDKPLAASAQECENLYELAEKHHQPLYVGF--NGF--DAMVQDWLQVAAAGKLP  140 (167)
T ss_dssp             GGGHHHHHHHHHHT--TCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC--GTH--HHHHHHHHHHHHHTCCC
T ss_pred             cccccccccccccc--ccccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe--CcC--CHHHHHHHHHhhcCCCC
Confidence            87778888888887  4445564332211111 11222222  4433 222  111  24567888888888874

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=91.96  E-value=0.13  Score=37.90  Aligned_cols=66  Identities=26%  Similarity=0.445  Sum_probs=46.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEe
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFE  269 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d  269 (353)
                      ++++++++|+|+|.+|.-++..++.+|. +|..+++++.-+      +       ...+....+.+++.... ++++.++
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~~l------~-------~~~~~~~~~~~~~~l~~~GV~i~~~   92 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPRLM------S-------RAAPATLADFVARYHAAQGVDLRFE   92 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSTT------T-------TTSCHHHHHHHHHHHHTTTCEEEES
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccccc------c-------ccCCHHHHHHHHHHHHHCCcEEEeC
Confidence            5678999999999999999999999999 999998765421      0       00134455555544333 7777765


Q ss_pred             c
Q 018627          270 C  270 (353)
Q Consensus       270 ~  270 (353)
                      +
T Consensus        93 ~   93 (121)
T d1d7ya2          93 R   93 (121)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.95  E-value=0.27  Score=38.41  Aligned_cols=94  Identities=14%  Similarity=0.243  Sum_probs=63.0

Q ss_pred             hhchhhhHHHHHHHHhccC-CCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCc
Q 018627          173 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE  250 (353)
Q Consensus       173 ~l~~~~~ta~~al~~~~~~-~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~  250 (353)
                      .+||+....+..| +..++ -.|++|+|+|. ..+|.-++.++...|+ +|+.+.+..                     .
T Consensus        18 ~~PcTp~aii~lL-~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t---------------------~   74 (170)
T d1a4ia1          18 FIPCTPKGCLELI-KETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKT---------------------A   74 (170)
T ss_dssp             CCCHHHHHHHHHH-HTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTC---------------------S
T ss_pred             CCCChHHHHHHHH-HHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEeccc---------------------c
Confidence            3444333333333 44443 37999999997 6799999999999999 898885432                     2


Q ss_pred             cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCC
Q 018627          251 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       251 ~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +..+.++     ..|+++.++|.+..+..  ..++++ -.++.+|..
T Consensus        75 ~l~~~~~-----~aDivi~a~G~~~~i~~--~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          75 HLDEEVN-----KGDILVVATGQPEMVKG--EWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             SHHHHHT-----TCSEEEECCCCTTCBCG--GGSCTT-CEEEECCCB
T ss_pred             cHHHHHh-----hccchhhcccccccccc--ccccCC-CeEeccCcc
Confidence            2222222     48899999988665443  478886 788888754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.94  E-value=0.045  Score=40.57  Aligned_cols=38  Identities=21%  Similarity=0.301  Sum_probs=33.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK  230 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~  230 (353)
                      +..++++|+|+|.+|+-++++++.+|. +|..+.+++.-
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~~   60 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASEI   60 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEcccc
Confidence            346899999999999999999999999 99999776543

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.79  E-value=0.055  Score=44.60  Aligned_cols=75  Identities=17%  Similarity=0.293  Sum_probs=45.6

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEEe
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFE  269 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d  269 (353)
                      .+++|||+|+ |.+|..+++.+...|. .+|+++.|++.+......-..... .|..    +. +.+.... .++|++|.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~----~~-~~~~~~~-~~~d~vi~   86 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFE----KL-DDYASAF-QGHDVGFC   86 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGG----GG-GGGGGGG-SSCSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeeccc----cc-ccccccc-cccccccc
Confidence            4578999998 9999999998877774 479898886644322111111111 1221    11 1222221 26899999


Q ss_pred             ccCC
Q 018627          270 CIGD  273 (353)
Q Consensus       270 ~~g~  273 (353)
                      |+|.
T Consensus        87 ~~~~   90 (232)
T d2bkaa1          87 CLGT   90 (232)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9885

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.72  E-value=0.61  Score=35.24  Aligned_cols=39  Identities=18%  Similarity=0.329  Sum_probs=31.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK  235 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~  235 (353)
                      +|-|+|.|.+|..++.-+...|. .+++.++..++....+
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHh
Confidence            57788999999999999999998 8888876665554443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.57  E-value=0.44  Score=37.35  Aligned_cols=84  Identities=14%  Similarity=0.116  Sum_probs=51.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC--hhhHHHHHhCCCceEeCCCC------CCccHHHHHHHHhcCCccEE
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN--PEKCEKAKAFGVTEFLNPND------NNEPVQQVIKRITDGGADYS  267 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~--~~~~~~~~~~G~~~~~~~~~------~~~~~~~~~~~~~~~~~dvv  267 (353)
                      +|.|+|+|..|.+.+..+...|. .|....++  ++..+.+.+-.-...+....      ...++.+.+.     ..|+|
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~ad~I   75 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE-----NAEVV   75 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT-----TCSEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHh-----ccchh
Confidence            58899999999999999988887 88888764  33444444322111000000      0123333332     58999


Q ss_pred             EeccCChHHHHHHHHHhcc
Q 018627          268 FECIGDTGMITTALQSCCD  286 (353)
Q Consensus       268 ~d~~g~~~~~~~~~~~l~~  286 (353)
                      +.++.. ..++..++.+.+
T Consensus        76 i~avps-~~~~~~~~~l~~   93 (180)
T d1txga2          76 LLGVST-DGVLPVMSRILP   93 (180)
T ss_dssp             EECSCG-GGHHHHHHHHTT
T ss_pred             hcccch-hhhHHHHHhhcc
Confidence            999986 456666665544

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.51  E-value=0.8  Score=34.84  Aligned_cols=96  Identities=15%  Similarity=0.217  Sum_probs=61.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHC--CCCeEEEEcCCh--hh-HHHHHhCCCceEeCCCCCCccH---H------------
Q 018627          195 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGVDTNP--EK-CEKAKAFGVTEFLNPNDNNEPV---Q------------  253 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~--g~~~vi~~~~~~--~~-~~~~~~~G~~~~~~~~~~~~~~---~------------  253 (353)
                      ++|.|+|+ |.+|..++.+.+..  .+ +|++.....  +. .+++++|....++..+  +...   .            
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d--~~~~~~l~~~l~~~~~~~~~   78 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDD--EASAKLLKTMLQQQGSRTEV   78 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESS--HHHHHHHHHHHHHTTCCCEE
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhccccccc--HHHHHHHHHHhhhhcccccc
Confidence            47899998 99999999999887  35 666664333  22 2344667777765543  1111   1            


Q ss_pred             ----HHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEc
Q 018627          254 ----QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       254 ----~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                          +.+.++... .+|+|+.++.+...+...+..++.  |+-+.+.
T Consensus        79 ~~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~--gk~iaLA  123 (151)
T d1q0qa2          79 LSGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRA--GKTILLA  123 (151)
T ss_dssp             EESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHT--TCEEEEC
T ss_pred             ccChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhc--CCeEEEE
Confidence                112222222 688888888777788888888887  4445553

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.50  E-value=0.44  Score=37.32  Aligned_cols=91  Identities=16%  Similarity=0.172  Sum_probs=61.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCCeEEEE-cCChhhHHHH-HhCCCceE-eCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGV-DTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~-g~~~vi~~-~~~~~~~~~~-~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      ++.|+|+|.+|...++.++.. ++ +++++ +.++++.+.+ ++++.... ..+    .++.+.+.   ...+|+|+-++
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll~---~~~iD~v~I~t   74 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH----GSYESLLE---DPEIDALYVPL   74 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHHHHHH---CTTCCEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec----CcHHHhhh---ccccceeeecc
Confidence            578899999999888888776 56 66654 7777775554 55664321 111    23444433   23799999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ......+.+..++..  |.=|.+.-
T Consensus        75 p~~~h~~~~~~~l~~--g~~v~~EK   97 (184)
T d1ydwa1          75 PTSLHVEWAIKAAEK--GKHILLEK   97 (184)
T ss_dssp             CGGGHHHHHHHHHTT--TCEEEECS
T ss_pred             cchhhcchhhhhhhc--cceeeccc
Confidence            887788888888886  55556643

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.48  E-value=0.18  Score=42.49  Aligned_cols=37  Identities=19%  Similarity=0.300  Sum_probs=27.6

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHH
Q 018627          197 VVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA  234 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~  234 (353)
                      +||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~   43 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   43 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHHH
Confidence            467787 8999999999999999 77665 4455554433

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.44  E-value=1.5  Score=36.26  Aligned_cols=32  Identities=28%  Similarity=0.444  Sum_probs=29.2

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEE
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV  224 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~  224 (353)
                      -.|++|+|.|.|-+|..+++.+...|+ +|+++
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvav   65 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTL   65 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEE
Confidence            468999999999999999999999999 77776

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=91.38  E-value=0.21  Score=43.13  Aligned_cols=73  Identities=12%  Similarity=0.191  Sum_probs=46.2

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEe--CCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL--NPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      +|||+|+ |-+|..+++.+...|..+|+++++...+...+.+..--..+  |.. ...++.+.+..    ++|+||.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~-~~~~~~~~~~~----~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDIS-IHSEWIEYHVK----KCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTT-TCSHHHHHHHH----HCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccC-ChHHHHHHHHh----CCCccccccc
Confidence            6999998 88999999888888843899987766554444332211222  222 12344433322    5999999887


Q ss_pred             C
Q 018627          273 D  273 (353)
Q Consensus       273 ~  273 (353)
                      .
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.33  E-value=0.36  Score=37.63  Aligned_cols=43  Identities=21%  Similarity=0.318  Sum_probs=37.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV  239 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~  239 (353)
                      +|-|+|.|.+|..++.-+...|+ +|++.++++++.+.+.+.++
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47788999999999999999999 89999999999998866554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.22  E-value=0.31  Score=40.93  Aligned_cols=34  Identities=21%  Similarity=0.225  Sum_probs=29.0

Q ss_pred             CCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          194 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       194 g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      -++|||+|+ |.+|..++..+...|. +|+++.|+.
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence            356999998 8899999999989998 888887754

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.21  E-value=0.13  Score=42.20  Aligned_cols=38  Identities=24%  Similarity=0.287  Sum_probs=33.6

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      .+.+++|+|+|+|+.|+.++..++..|. .|++++.+++
T Consensus        46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            4568999999999999999999999999 8999977664

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.11  E-value=0.18  Score=37.67  Aligned_cols=39  Identities=26%  Similarity=0.377  Sum_probs=34.1

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      .++++++|+|+|+|.+|.-++..++.+|. +|..+++.+.
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            35678999999999999999999999999 8999977653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.07  E-value=0.17  Score=37.02  Aligned_cols=35  Identities=17%  Similarity=0.277  Sum_probs=30.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ..++++|+|+|.+|.-+++.++.+|. .|..+.+++
T Consensus        21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence            45889999999999999999999999 888886654

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=91.00  E-value=1.8  Score=36.22  Aligned_cols=109  Identities=20%  Similarity=0.232  Sum_probs=66.1

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCCCC-----------------
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNPND-----------------  247 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~~~-----------------  247 (353)
                      +...+.+++.|+..++|..|++++..|+.+|.+-++.+  ..++.|.+.++.+|+.-++...+                 
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~  132 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG  132 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence            33445666666555779999999999999999444444  33667888899999875432211                 


Q ss_pred             ---------CCccH-------HHHHHHHhcCCccEEEeccCChHHHHHHHH---HhccCCceEEEEcC
Q 018627          248 ---------NNEPV-------QQVIKRITDGGADYSFECIGDTGMITTALQ---SCCDGWGLAVTLGV  296 (353)
Q Consensus       248 ---------~~~~~-------~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~---~l~~~~G~~v~~g~  296 (353)
                               ....+       ...+.+..++.+|.++-++|+..++.....   ...+. .+++.+..
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~-~~i~~Vep  199 (292)
T d2bhsa1         133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKP-VTIVGLQP  199 (292)
T ss_dssp             SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSC-CEEEEEEE
T ss_pred             cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCc-ceEEEecc
Confidence                     00001       111222234468999998887555544444   44454 66665543

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.96  E-value=0.15  Score=41.65  Aligned_cols=35  Identities=26%  Similarity=0.359  Sum_probs=31.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      +.-++|+|+|+|..|++++..+...|. +|.++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            455789999999999999999999999 89999764

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.94  E-value=0.18  Score=37.03  Aligned_cols=34  Identities=24%  Similarity=0.424  Sum_probs=30.7

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .++++|+|+|.+|.-+++++..+|. +|..+.+++
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            4789999999999999999999999 999987654

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.92  E-value=0.13  Score=44.07  Aligned_cols=44  Identities=18%  Similarity=0.354  Sum_probs=34.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh--hHHHHHhCCC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGV  239 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~--~~~~~~~~G~  239 (353)
                      ++|||+|+ |-+|..++..+...|+ +|+++++...  +.+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            58999998 8899999999988899 9999987543  3344555543

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.91  E-value=0.19  Score=36.56  Aligned_cols=35  Identities=17%  Similarity=0.250  Sum_probs=31.3

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      .++|+|+|+|.+|.-+++.++.+|. +|..+.+.+.
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            4789999999999999999999999 9999977653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.83  E-value=0.12  Score=43.97  Aligned_cols=37  Identities=30%  Similarity=0.394  Sum_probs=32.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ....++|+|+|+|..|++++..+...|. +|++++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            4556899999999999999999999999 999998654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=90.80  E-value=1.5  Score=32.83  Aligned_cols=94  Identities=10%  Similarity=0.092  Sum_probs=57.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhH----HHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC----EKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      +.++|.|.|.+|..+++.+...|. .+++++.++++.    +.++..|...+. -+   ..-.+.+++..-..+|.++-+
T Consensus         4 nHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~-Gd---~~d~~~L~~a~i~~a~~vi~~   78 (153)
T d1id1a_           4 DHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GD---SNDSSVLKKAGIDRCRAILAL   78 (153)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SC---TTSHHHHHHHTTTTCSEEEEC
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEE-cc---CcchHHHHHhccccCCEEEEc
Confidence            568999999999999999999998 788888776542    233334554332 21   122334444433478999988


Q ss_pred             cCChHH---HHHHHHHhccCCceEEEE
Q 018627          271 IGDTGM---ITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       271 ~g~~~~---~~~~~~~l~~~~G~~v~~  294 (353)
                      ++....   .....+.+.+. -+++..
T Consensus        79 ~~~d~~n~~~~~~~r~~~~~-~~iia~  104 (153)
T d1id1a_          79 SDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             SSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             cccHHHHHHHHHHHHHhCCC-CceEEE
Confidence            876332   12222344554 555544

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.76  E-value=0.12  Score=42.86  Aligned_cols=34  Identities=26%  Similarity=0.445  Sum_probs=29.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      .|+|+|+|+.|++++..++..|...|.+++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            6899999999999999999999767888877653

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=90.73  E-value=1  Score=36.00  Aligned_cols=96  Identities=15%  Similarity=0.107  Sum_probs=63.0

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      -.||=+|+| .|..++.+|+..--..+++++.++..++.+    ++.|...+.....+...   ....+.++.+|.|+-.
T Consensus        31 PlvLeIGcG-~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~---l~~~~~~~~~d~v~i~  106 (204)
T d2fcaa1          31 PIHIEVGTG-KGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT---LTDVFEPGEVKRVYLN  106 (204)
T ss_dssp             CEEEEECCT-TSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG---HHHHCCTTSCCEEEEE
T ss_pred             ceEEEEEec-CcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhh---hhcccCchhhhccccc
Confidence            345667876 688888899887333999999999877655    44676654322211222   2222334478877765


Q ss_pred             cCC--------------hHHHHHHHHHhccCCceEEEEc
Q 018627          271 IGD--------------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       271 ~g~--------------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ...              +..+....+.|+|+ |.+....
T Consensus       107 fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~T  144 (204)
T d2fcaa1         107 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKT  144 (204)
T ss_dssp             SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEE
T ss_pred             cccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEEE
Confidence            443              25788888999997 9998863

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.70  E-value=0.18  Score=43.34  Aligned_cols=31  Identities=26%  Similarity=0.362  Sum_probs=27.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      ++|||+|+ |-+|..++..+...|. +|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            68999998 8899999999988999 8999864

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.62  E-value=0.74  Score=34.68  Aligned_cols=74  Identities=19%  Similarity=0.170  Sum_probs=46.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCC-CeEEEEcCChhhHHHHHhCCCceE--eCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEF--LNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~-~~vi~~~~~~~~~~~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      .+|.|+|| |.+|..++.++...+. ++++.++.++.+.+.+.-.-+...  ........++.+.++     +.|+|+-+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~-----~aDivVit   75 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLK-----GCDVVVIP   75 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHT-----TCSEEEEC
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhC-----CCCEEEEC
Confidence            36889997 9999999999988876 789999988766544322111110  000001233444433     58999998


Q ss_pred             cCC
Q 018627          271 IGD  273 (353)
Q Consensus       271 ~g~  273 (353)
                      .|.
T Consensus        76 ag~   78 (144)
T d1mlda1          76 AGV   78 (144)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            884

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=90.58  E-value=0.16  Score=41.87  Aligned_cols=89  Identities=13%  Similarity=0.145  Sum_probs=56.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-EeCCCCCCccHHHHHHHH-hcCCcc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRI-TDGGAD  265 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~~~~~~~~~~~~~~~~~-~~~~~d  265 (353)
                      .++++||-+|+| .|..+..+++ .|. +|+++|.|++-++.+++    .|... ++..     ++    ..+ .++.||
T Consensus        36 ~~~~~vLDiGCG-~G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~-----d~----~~~~~~~~fD  103 (246)
T d1y8ca_          36 LVFDDYLDLACG-TGNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQ-----DI----SNLNINRKFD  103 (246)
T ss_dssp             CCTTEEEEETCT-TSTTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECC-----CG----GGCCCSCCEE
T ss_pred             CCCCeEEEEeCc-CCHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeecc-----ch----hhhccccccc
Confidence            446789999986 4556666655 477 99999999998777644    34322 2211     11    111 234899


Q ss_pred             EEEeccC------Ch----HHHHHHHHHhccCCceEEE
Q 018627          266 YSFECIG------DT----GMITTALQSCCDGWGLAVT  293 (353)
Q Consensus       266 vv~d~~g------~~----~~~~~~~~~l~~~~G~~v~  293 (353)
                      +|+...+      ..    ..+....+.|+++ |.++.
T Consensus       104 ~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         104 LITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             ccceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            9985322      11    2456677788997 99874

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.52  E-value=0.11  Score=42.35  Aligned_cols=33  Identities=21%  Similarity=0.464  Sum_probs=28.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +|+|+|+|..|+.++..++..|.++|++.++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            489999999999999999999975699998764

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=90.43  E-value=0.94  Score=35.55  Aligned_cols=107  Identities=18%  Similarity=0.290  Sum_probs=66.8

Q ss_pred             HhccCCCCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          187 NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      +...+++|..+ |-+. |.=|+.. .+++. +. +|+++|++++.++.+++.-...+..++....++.+.+.....+.+|
T Consensus        12 ~~l~~~~g~~~-vD~T~G~GGhs~-~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vd   87 (182)
T d1wg8a2          12 DLLAVRPGGVY-VDATLGGAGHAR-GILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVD   87 (182)
T ss_dssp             HHHTCCTTCEE-EETTCTTSHHHH-HHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred             HhcCCCCCCEE-EEeCCCCcHHHH-HHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccC
Confidence            44567888875 4433 4334533 34444 55 8999999999988887753333222222245566665554444798


Q ss_pred             EEEeccCChH---------------HHHHHHHHhccCCceEEEEcCCC
Q 018627          266 YSFECIGDTG---------------MITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       266 vv~d~~g~~~---------------~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .|+=-.|-+.               .++.++..++++ |+++.+....
T Consensus        88 gIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~fhs  134 (182)
T d1wg8a2          88 GILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAFHS  134 (182)
T ss_dssp             EEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEECSH
T ss_pred             EEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEeccc
Confidence            6664445422               367888999997 9999887643

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=90.31  E-value=0.36  Score=40.12  Aligned_cols=34  Identities=21%  Similarity=0.327  Sum_probs=29.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      ++|||+|+ |-+|..++..+...|. +|++++++..
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~   38 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGH-PTFLLVREST   38 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCc
Confidence            67999998 8999999999999998 8999887653

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=90.30  E-value=0.29  Score=40.82  Aligned_cols=102  Identities=11%  Similarity=-0.055  Sum_probs=64.6

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      +......+.+||=+|+| .|..+..++..... +|++++.+++-++.+++ +.....+.+.  ..++.+ + ...++.||
T Consensus        87 ~~l~~~~~~~vLD~GcG-~G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~--~~d~~~-~-~~~~~~fD  160 (254)
T d1xtpa_          87 ASLPGHGTSRALDCGAG-IGRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFI--LASMET-A-TLPPNTYD  160 (254)
T ss_dssp             HTSTTCCCSEEEEETCT-TTHHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEE--ESCGGG-C-CCCSSCEE
T ss_pred             hhCCCCCCCeEEEeccc-CChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeE--Eccccc-c-ccCCCccc
Confidence            44455678899999986 57777788776655 89999999999888876 3222222111  011100 0 01234799


Q ss_pred             EEEeccCC-----h---HHHHHHHHHhccCCceEEEEc
Q 018627          266 YSFECIGD-----T---GMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       266 vv~d~~g~-----~---~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      +|+..-.-     +   ..+..+.+.|+++ |.++..-
T Consensus       161 ~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         161 LIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            99874321     1   3467777889997 9988754

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.30  E-value=0.14  Score=42.42  Aligned_cols=34  Identities=29%  Similarity=0.481  Sum_probs=29.1

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      +.|||+|+ +++|++.++.+...|+ +|+.++++++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            45788987 8999999999999999 8998887653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.29  E-value=0.19  Score=36.39  Aligned_cols=34  Identities=24%  Similarity=0.406  Sum_probs=30.5

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .++++|+|+|.+|.-+++.++.+|. +|..+.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            4899999999999999999999999 899987654

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.29  E-value=1  Score=34.79  Aligned_cols=98  Identities=16%  Similarity=0.174  Sum_probs=58.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcC--ChhhHHHHHhCCCce------E--------------eCCCCCCccHH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDT--NPEKCEKAKAFGVTE------F--------------LNPNDNNEPVQ  253 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~--~~~~~~~~~~~G~~~------~--------------~~~~~~~~~~~  253 (353)
                      +|.|.|-|-+|+.+.+++...+. +|+++--  +.+.+.++-++...+      +              ..+.  ..+. 
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~--~~~p-   77 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATA--VKDP-   77 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEEC--CSSG-
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEe--cCCh-
Confidence            57899999999999999888888 7777622  224444554432110      0              0011  0110 


Q ss_pred             HHHHHHhcCCccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          254 QVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       254 ~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +.+.+ ...++|+|+||+|.....+.+...+..+ -+=|.+..+..
T Consensus        78 ~~i~W-~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~k  121 (168)
T d2g82a1          78 KEIPW-AEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPAK  121 (168)
T ss_dssp             GGCCT-GGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCB
T ss_pred             HHCcc-cccCCceeEeccccccchHHhhhhhccc-cceeeeccccc
Confidence            11111 1127999999999866677888888876 55555554443

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.22  E-value=0.23  Score=36.60  Aligned_cols=34  Identities=21%  Similarity=0.199  Sum_probs=30.9

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .++++|+|+|.+|+-++..++.+|. +|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            4789999999999999999999999 899997764

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=90.20  E-value=0.5  Score=40.68  Aligned_cols=95  Identities=19%  Similarity=0.210  Sum_probs=62.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC------C-----ceEeCCCCCCccHHHHHHHHh
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG------V-----TEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G------~-----~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      ...++|||+|+| .|..+..+++.....+|.+++.+++-.+.++++-      +     ..++     ..+..+.+++ .
T Consensus        76 ~~pk~VLiiG~G-~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~-----~~Da~~~l~~-~  148 (312)
T d1uira_          76 PEPKRVLIVGGG-EGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLV-----IDDARAYLER-T  148 (312)
T ss_dssp             SCCCEEEEEECT-TSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE-----ESCHHHHHHH-C
T ss_pred             CCcceEEEeCCC-chHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEE-----EchHHHHhhh-c
Confidence            456899999875 2555556777666669999999999888887631      1     0122     1344555554 3


Q ss_pred             cCCccEEEecc----CC---------hHHHHHHHHHhccCCceEEEE
Q 018627          261 DGGADYSFECI----GD---------TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       261 ~~~~dvv~d~~----g~---------~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ++.+|+||--.    +.         .+.++.+.+.|+++ |.++.-
T Consensus       149 ~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~  194 (312)
T d1uira_         149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQ  194 (312)
T ss_dssp             CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEE
T ss_pred             CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEe
Confidence            45899887422    21         24567788999997 988753

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.19  E-value=0.9  Score=33.44  Aligned_cols=72  Identities=17%  Similarity=0.258  Sum_probs=46.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEE-cCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~-~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      +|.|+|+ |-+|++..++++..+. .+++. +.+...                    .         -..+|+++|.+..
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~-~l~~~id~~~~~--------------------~---------~~~~DVvIDFS~p   51 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGH-ELVLKVDVNGVE--------------------E---------LDSPDVVIDFSSP   51 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEEETTEEE--------------------E---------CSCCSEEEECSCG
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCC-eEEEEECCCcHH--------------------H---------hccCCEEEEecCH
Confidence            5889997 9999999999999898 55443 322110                    0         0247888887654


Q ss_pred             hHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          274 TGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       274 ~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                       +.....++..... +.=+.+|.++-
T Consensus        52 -~~~~~~l~~~~~~-~~p~ViGTTG~   75 (128)
T d1vm6a3          52 -EALPKTVDLCKKY-RAGLVLGTTAL   75 (128)
T ss_dssp             -GGHHHHHHHHHHH-TCEEEECCCSC
T ss_pred             -HHHHHHHHHHHhc-CCCEEEEcCCC
Confidence             4455555555554 66677776654

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=90.09  E-value=0.93  Score=34.57  Aligned_cols=86  Identities=10%  Similarity=0.117  Sum_probs=55.1

Q ss_pred             EEEEEcCChHHHH-HHHHHHHC-CCCeEE-EEcCChhhHHHH-HhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEecc
Q 018627          196 TVVIFGLGTVGLS-VAQGAKAR-GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI  271 (353)
Q Consensus       196 ~vLV~Gag~vG~~-a~~la~~~-g~~~vi-~~~~~~~~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~  271 (353)
                      +|.|+|.|.+|.- .+...+.. ++ .++ +.++++++.+.+ +++++..   +    .++.+.+     ..+|+|+-|+
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~~~~~---~----~~~~~l~-----~~~D~V~I~t   69 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESWRIPY---A----DSLSSLA-----ASCDAVFVHS   69 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHHTCCB---C----SSHHHHH-----TTCSEEEECS
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcccccc---c----ccchhhh-----hhcccccccc
Confidence            5789999998864 55555554 66 554 456767665544 5566542   1    1222222     2589999999


Q ss_pred             CChHHHHHHHHHhccCCceEEEEcC
Q 018627          272 GDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       272 g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ......+.+..++..  |.=|.+.-
T Consensus        70 p~~~h~~~~~~al~~--gk~V~~EK   92 (164)
T d1tlta1          70 STASHFDVVSTLLNA--GVHVCVDK   92 (164)
T ss_dssp             CTTHHHHHHHHHHHT--TCEEEEES
T ss_pred             cchhccccccccccc--cceeeccc
Confidence            887778888888887  44455543

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=89.88  E-value=0.23  Score=42.10  Aligned_cols=96  Identities=16%  Similarity=0.120  Sum_probs=64.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC-----Cc-----eEeCCCCCCccHHHHHHHHhc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-----VT-----EFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G-----~~-----~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      ...++|||+|+| -|..+..+++..+.++|.+++.+++-.+.++++-     +.     .++.     .+..+.+++ +.
T Consensus        74 ~~p~~vLiiGgG-~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~-----~D~~~~l~~-~~  146 (274)
T d1iy9a_          74 PNPEHVLVVGGG-DGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV-----DDGFMHIAK-SE  146 (274)
T ss_dssp             SSCCEEEEESCT-TCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE-----SCSHHHHHT-CC
T ss_pred             CCcceEEecCCC-CcHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe-----chHHHHHhh-cC
Confidence            456899999764 2455556777777779999999999988887742     21     1221     223344444 34


Q ss_pred             CCccEEEeccC----------ChHHHHHHHHHhccCCceEEEEc
Q 018627          262 GGADYSFECIG----------DTGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       262 ~~~dvv~d~~g----------~~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      ..+|+|+--..          ..+.++...+.|+++ |.++.-.
T Consensus       147 ~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~  189 (274)
T d1iy9a_         147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (274)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEec
Confidence            48998864321          235688888999997 9988654

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.86  E-value=0.12  Score=43.54  Aligned_cols=33  Identities=24%  Similarity=0.335  Sum_probs=29.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      .|+|+|+|+.|++++..++..|. +|++++++++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            58999999999999999999999 8999987653

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.85  E-value=0.61  Score=39.53  Aligned_cols=99  Identities=13%  Similarity=0.129  Sum_probs=63.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC--------ceEeCCCCCCccHHHHHHHHhcC
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--------TEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~--------~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ....++|||+|+| -|..+-.+++..+..+|++++.+++-.+.++++-.        ..+-..   ..+..+.+++ +.+
T Consensus        76 ~~~pk~vLiiGgG-~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~---~~Da~~~l~~-~~~  150 (285)
T d2o07a1          76 HPNPRKVLIIGGG-DGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH---VGDGFEFMKQ-NQD  150 (285)
T ss_dssp             SSSCCEEEEEECT-TSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHHHT-CSS
T ss_pred             CcCcCeEEEeCCC-chHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEE---EccHHHHHhc-CCC
Confidence            3456899999764 24455566777677799999999999888877421        111111   1234445544 345


Q ss_pred             CccEEEeccCC----------hHHHHHHHHHhccCCceEEEEc
Q 018627          263 GADYSFECIGD----------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       263 ~~dvv~d~~g~----------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .+|+|+--...          .+.++...+.|+++ |.++.-.
T Consensus       151 ~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~  192 (285)
T d2o07a1         151 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  192 (285)
T ss_dssp             CEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEec
Confidence            89987743221          24567777899997 9988654

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=89.85  E-value=0.18  Score=42.77  Aligned_cols=37  Identities=30%  Similarity=0.386  Sum_probs=31.8

Q ss_pred             CCCEEEEEcC-C--hHHHHHHHHHHHCCCCeEEEEcCChhh
Q 018627          193 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEK  230 (353)
Q Consensus       193 ~g~~vLV~Ga-g--~vG~~a~~la~~~g~~~vi~~~~~~~~  230 (353)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.+.++++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence            6899999997 4  799999999999999 88888776543

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.81  E-value=0.44  Score=39.46  Aligned_cols=34  Identities=38%  Similarity=0.470  Sum_probs=30.4

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEc
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      --.|++|+|.|.|.+|..+++++...|+ +|++++
T Consensus        28 ~l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVS   61 (242)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEee
Confidence            3479999999999999999999999999 787764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.74  E-value=0.22  Score=36.74  Aligned_cols=36  Identities=22%  Similarity=0.315  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +..++++|+|+|.+|+=++++.+.+|. +|..+.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            446899999999999999999999999 899996653

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.71  E-value=0.26  Score=39.51  Aligned_cols=41  Identities=39%  Similarity=0.553  Sum_probs=37.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF  237 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~  237 (353)
                      +|.|+|.|-+|+.++..+...|. +|+++|.++++.+.+++-
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence            58899999999999999999999 999999999999988763

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.62  E-value=0.25  Score=42.45  Aligned_cols=50  Identities=26%  Similarity=0.357  Sum_probs=34.3

Q ss_pred             HHHH-HHHHhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhH
Q 018627          180 AGLG-AAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC  231 (353)
Q Consensus       180 ta~~-al~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~  231 (353)
                      .+|. |+.+.....+|++||.+|+| .|..++.+|+ .|+++|++++.++.-.
T Consensus        21 ~~y~~ai~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~   71 (311)
T d2fyta1          21 ESYRDFIYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILY   71 (311)
T ss_dssp             HHHHHHHHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHH
T ss_pred             HHHHHHHHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHH
Confidence            3443 34444567789999999986 4555555554 5887999999988543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=89.33  E-value=0.77  Score=36.21  Aligned_cols=88  Identities=14%  Similarity=0.165  Sum_probs=60.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      .+++|.|+|.|.+|..++++++..|. +|++.++.....       ......    ..++.+.++.     .|++.-++.
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~----~~~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQ----VQHLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEE----CSCHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhh----hhhHHHHHhh-----ccceeeccc
Confidence            57899999999999999999999999 999997654321       001111    1234444443     688887765


Q ss_pred             ChH-----HHHHHHHHhccCCceEEEEcCCC
Q 018627          273 DTG-----MITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       273 ~~~-----~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      -..     .=...++.|+++ ..+|.++-..
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~aRG~  135 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPG-SLLINASRGT  135 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTT-EEEEECSCSS
T ss_pred             CCcchhhhccHHHHhhCCCC-CEEEEcCcHH
Confidence            321     125667888886 8888887543

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.29  E-value=0.7  Score=34.97  Aligned_cols=71  Identities=18%  Similarity=0.176  Sum_probs=45.2

Q ss_pred             CCCCEEEEEcC--ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-EeCCCCCCccHHHHHHHHhcCCc
Q 018627          192 SKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRITDGGA  264 (353)
Q Consensus       192 ~~g~~vLV~Ga--g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (353)
                      -.|++||=.++  |.+|+.   . ..+|+++|+.++.+.+..+.+++    ++... +...   ..+..+.+.. ..+.|
T Consensus        13 ~~g~~vlDl~~GtG~~~ie---a-~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii---~~D~~~~l~~-~~~~f   84 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAIE---A-VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLL---KMEAERAIDC-LTGRF   84 (152)
T ss_dssp             CCSCEEEEETCTTCHHHHH---H-HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEE---CSCHHHHHHH-BCSCE
T ss_pred             CCCCeEEEcCCccCHHHHH---H-HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhh---cccccccccc-ccccc
Confidence            46899998865  556553   2 34688899999999888776543    56543 2222   2334444433 34589


Q ss_pred             cEEEec
Q 018627          265 DYSFEC  270 (353)
Q Consensus       265 dvv~d~  270 (353)
                      |+||--
T Consensus        85 DiIf~D   90 (152)
T d2esra1          85 DLVFLD   90 (152)
T ss_dssp             EEEEEC
T ss_pred             ceeEec
Confidence            998854

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=89.07  E-value=1.5  Score=37.14  Aligned_cols=98  Identities=24%  Similarity=0.271  Sum_probs=63.3

Q ss_pred             hccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCCCC------------------
Q 018627          188 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNPND------------------  247 (353)
Q Consensus       188 ~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~~~------------------  247 (353)
                      ...+.+++.|+..++|.-|++++..|+.+|.+-++.+  ..++.|.+.++.+|+.-+.....                  
T Consensus        55 ~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~~  134 (310)
T d1y7la1          55 DGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASDP  134 (310)
T ss_dssp             TTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCT
T ss_pred             cCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhhc
Confidence            3445777777666779999999999999999655555  34446777888899876532110                  


Q ss_pred             ---------CCcc--------HHHHHHHHhcCCccEEEeccCChHHHHHHHHHhc
Q 018627          248 ---------NNEP--------VQQVIKRITDGGADYSFECIGDTGMITTALQSCC  285 (353)
Q Consensus       248 ---------~~~~--------~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~  285 (353)
                               .+..        ....+.+..++.+|.++-++|+...+......++
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         135 SRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             CccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                     0000        1122333344578999999987666666655554

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=88.99  E-value=0.2  Score=43.18  Aligned_cols=35  Identities=17%  Similarity=0.378  Sum_probs=31.0

Q ss_pred             CCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          194 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       194 g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      .++|+|+|||..|+.++..+...|. +|.+++.++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence            5789999999999999999998898 9999977653

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.95  E-value=0.47  Score=40.05  Aligned_cols=95  Identities=17%  Similarity=0.185  Sum_probs=59.9

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCC-C------------c---eEeCCCCCCccHHH
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG-V------------T---EFLNPNDNNEPVQQ  254 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G-~------------~---~~~~~~~~~~~~~~  254 (353)
                      ....++|||+|+|. |..+-.+++. ...+|.+++.+++-.+.++++- .            +   .++.     .+..+
T Consensus        70 ~~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~-----~Da~~  142 (276)
T d1mjfa_          70 HPKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI-----GDGFE  142 (276)
T ss_dssp             SSCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE-----SCHHH
T ss_pred             CCCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE-----ChHHH
Confidence            35568999998642 3333444554 4558999999999998887632 1            1   1221     23344


Q ss_pred             HHHHHhcCCccEEEe-ccCC---------hHHHHHHHHHhccCCceEEEEc
Q 018627          255 VIKRITDGGADYSFE-CIGD---------TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       255 ~~~~~~~~~~dvv~d-~~g~---------~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .+++  ++++|+|+- ....         .+.++...+.|+++ |.++.-+
T Consensus       143 ~l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         143 FIKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             HHHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             HHhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence            4543  458998775 2221         24577888999997 9987643

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.80  E-value=0.44  Score=41.08  Aligned_cols=30  Identities=20%  Similarity=0.243  Sum_probs=27.0

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEc
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      ++|||+|+ |-+|..++..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            68999998 8999999999999998 888885

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.75  E-value=0.26  Score=37.81  Aligned_cols=36  Identities=31%  Similarity=0.395  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCC-eEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~-~vi~~~~~~  228 (353)
                      .|++|+|+|+|..|+.+++.++.++.+ +|+.++.++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            478999999999999999999888742 788887655

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.60  E-value=0.25  Score=41.68  Aligned_cols=36  Identities=25%  Similarity=0.423  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ++..+|+|+|+|.-|+.++..+...|. +|.+.+.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            455679999999999999999999999 899997654

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.28  E-value=0.38  Score=38.91  Aligned_cols=98  Identities=14%  Similarity=0.073  Sum_probs=62.2

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhC----CCce--EeCCCCCCccHHHHHHHHhcC
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE--FLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~----G~~~--~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      ....++.+||-+|+| .|..+..+++..+. +|++++.+++-++.+++.    +...  ++..+  -.++     ...++
T Consensus        56 ~~~~~~~~vLDiGcG-~G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d--~~~~-----~~~~~  126 (222)
T d2ex4a1          56 PNKTGTSCALDCGAG-IGRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCG--LQDF-----TPEPD  126 (222)
T ss_dssp             --CCCCSEEEEETCT-TTHHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEECC--GGGC-----CCCSS
T ss_pred             cCCCCCCEEEEeccC-CCHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccccccccc--cccc-----ccccc
Confidence            345678899999986 56666677666555 899999999998888663    2211  12111  1111     11234


Q ss_pred             CccEEEecc-----CCh---HHHHHHHHHhccCCceEEEEcC
Q 018627          263 GADYSFECI-----GDT---GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       263 ~~dvv~d~~-----g~~---~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .||+|+..-     ..+   ..+....+.|+++ |.++....
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~~  167 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKDN  167 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEEc
Confidence            899998732     222   3567777899997 99987744

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=88.22  E-value=1.3  Score=37.35  Aligned_cols=102  Identities=12%  Similarity=0.188  Sum_probs=61.9

Q ss_pred             hccCCCCCEEEEEcC--ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhc
Q 018627          188 VADISKGSTVVIFGL--GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       188 ~~~~~~g~~vLV~Ga--g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      ....++|++||-.-|  |+-...+++   .+.-..|++.+.++.|++.+    +.+|+..++.... +....   .....
T Consensus        97 ~L~~~~g~~vLD~CAaPGgKt~~la~---l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~-~~~~~---~~~~~  169 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGGKTTHILE---VAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGD-GRYPS---QWCGE  169 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCHHHHHHHH---HCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECC-TTCTH---HHHTT
T ss_pred             ccCccccceeEeccCccccchhhhhh---hhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecc-ccccc---hhccc
Confidence            457899999999843  654443333   33324899999999998766    5588765433221 11111   11123


Q ss_pred             CCccEEEe---ccCCh-------------------------HHHHHHHHHhccCCceEEEEcCC
Q 018627          262 GGADYSFE---CIGDT-------------------------GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       262 ~~~dvv~d---~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +.||.|+-   |+|..                         ..+..+++.++++ |++|-.-.+
T Consensus       170 ~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~g-G~lvYsTCS  232 (284)
T d1sqga2         170 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYATCS  232 (284)
T ss_dssp             CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEESC
T ss_pred             ccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCC-ceEEEeeec
Confidence            47986654   66542                         3566677788886 888765543

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=88.12  E-value=0.29  Score=39.74  Aligned_cols=94  Identities=12%  Similarity=0.054  Sum_probs=56.4

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCce--EeCCCCCCccHHHHHHHHhcCCccE
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADY  266 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~--~~~~~~~~~~~~~~~~~~~~~~~dv  266 (353)
                      .+..++++||=+|+| .|..+..+++ .|. +|++++.+++.++.+++...+.  ++...  ..++      ..++.||+
T Consensus        16 ~~~~~~~~VLDiGcG-~G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~--~~~~------~~~~~fD~   84 (225)
T d2p7ia1          16 TPFFRPGNLLELGSF-KGDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSR--FEDA------QLPRRYDN   84 (225)
T ss_dssp             GGGCCSSCEEEESCT-TSHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESC--GGGC------CCSSCEEE
T ss_pred             hhhCCCCcEEEEeCC-CcHHHHHHHH-cCC-eEEEEeCcHHHhhhhhccccccccccccc--cccc------cccccccc
Confidence            344567789999875 3555555554 477 8999999999999887642222  22111  1111      12348999


Q ss_pred             EEecc-----CCh-HHHHHHH-HHhccCCceEEEE
Q 018627          267 SFECI-----GDT-GMITTAL-QSCCDGWGLAVTL  294 (353)
Q Consensus       267 v~d~~-----g~~-~~~~~~~-~~l~~~~G~~v~~  294 (353)
                      |+-.-     ..+ ..+.... ++|+++ |.++..
T Consensus        85 I~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          85 IVLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             ccccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            88432     112 2344454 468886 887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=88.07  E-value=0.15  Score=44.93  Aligned_cols=31  Identities=19%  Similarity=0.390  Sum_probs=26.1

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      +|||+|+ |-+|..++..+...|...|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6999998 889999999998889866777754

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.02  E-value=0.28  Score=41.94  Aligned_cols=97  Identities=12%  Similarity=0.103  Sum_probs=63.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCC--------c--eEeCCCCCCccHHHHHHHHhc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--------T--EFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~--------~--~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      ...++|||+|+|. |..+-.+++..+.++|++++.+++-.+.++++-.        .  .++     ..+..+.+++ ..
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~-----~~Da~~~l~~-~~  160 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV-----IANGAEYVRK-FK  160 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE-----ESCHHHHGGG-CS
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEE-----hhhHHHHHhc-CC
Confidence            4458999998642 3445567777766699999999998888877421        0  122     1233444543 34


Q ss_pred             CCccEEEeccC-----------ChHHHHHHHHHhccCCceEEEEcC
Q 018627          262 GGADYSFECIG-----------DTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       262 ~~~dvv~d~~g-----------~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +.+|+|+--..           ..+.++.+.+.|+++ |.++.-..
T Consensus       161 ~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         161 NEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             SCEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            48998774221           135677888999997 99887543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=87.99  E-value=0.19  Score=38.16  Aligned_cols=83  Identities=12%  Similarity=-0.017  Sum_probs=49.1

Q ss_pred             EEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCChHHHH
Q 018627          199 IFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMIT  278 (353)
Q Consensus       199 V~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~~~~~  278 (353)
                      ++|+|-+|.+++..++. +...+.+..|+.++.+.+.+.+.....+..+            .-...|+||-|+.. ..+.
T Consensus         4 fIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~------------~~~~~DiVil~v~d-~~i~   69 (153)
T d2i76a2           4 FVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAATLEK------------HPELNGVVFVIVPD-RYIK   69 (153)
T ss_dssp             EESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCC------------CCC---CEEECSCT-TTHH
T ss_pred             EEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccchhh------------hhccCcEEEEeccc-hhhh
Confidence            56999999998876655 3323456789999988887765443322211            01257899989875 4566


Q ss_pred             HHHHHhccCCceEEEEc
Q 018627          279 TALQSCCDGWGLAVTLG  295 (353)
Q Consensus       279 ~~~~~l~~~~G~~v~~g  295 (353)
                      .....++.....++.+.
T Consensus        70 ~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          70 TVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHTTTCCSSCCEEECC
T ss_pred             HHHhhhcccceeeeecc
Confidence            77777765313444444

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=87.84  E-value=1.7  Score=34.31  Aligned_cols=107  Identities=18%  Similarity=0.200  Sum_probs=65.6

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHHHh----CCCce-EeCCCCCCccHHHHHHHHh
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~~~----~G~~~-~~~~~~~~~~~~~~~~~~~  260 (353)
                      +...+++|+.+|-.++|.=|.. -.+++.. +. +|+++|.+++.++.+++    ++... ++...  ..++...+....
T Consensus        17 ~~l~~~~~~~~lD~t~G~Gghs-~~il~~~~~~-~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~--f~~~~~~~~~~~   92 (192)
T d1m6ya2          17 EFLKPEDEKIILDCTVGEGGHS-RAILEHCPGC-RIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVS--YREADFLLKTLG   92 (192)
T ss_dssp             HHHCCCTTCEEEETTCTTSHHH-HHHHHHCTTC-EEEEEESCHHHHHHHHHHTGGGTTTEEEEECC--GGGHHHHHHHTT
T ss_pred             HhhCCCCCCEEEEecCCCcHHH-HHHHhcCCCC-eEEEeechHHHHHHHHHhhccccccccchhHH--HhhHHHHHHHcC
Confidence            5557788887755433332333 3444444 55 89999999999988865    33222 23222  345555555544


Q ss_pred             cCCccEEEeccCCh---------------HHHHHHHHHhccCCceEEEEcCCC
Q 018627          261 DGGADYSFECIGDT---------------GMITTALQSCCDGWGLAVTLGVPK  298 (353)
Q Consensus       261 ~~~~dvv~d~~g~~---------------~~~~~~~~~l~~~~G~~v~~g~~~  298 (353)
                      .+.+|.|+=-.|-+               ..+..+++.++++ |+++.+....
T Consensus        93 ~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f~s  144 (192)
T d1m6ya2          93 IEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISFHS  144 (192)
T ss_dssp             CSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEESSH
T ss_pred             CCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeecccc
Confidence            45898664434431               3466777889997 9999886543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.58  E-value=0.38  Score=35.10  Aligned_cols=36  Identities=19%  Similarity=0.348  Sum_probs=31.3

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +.+++++|+|+|.+|.-++..+..+|. +|..+.+++
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            345789999999999999999999999 898887654

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=87.46  E-value=0.95  Score=36.57  Aligned_cols=91  Identities=21%  Similarity=0.235  Sum_probs=58.7

Q ss_pred             CEEEEEcCChHHH-HHHHHHHHC-CCCeEE-EEcCChhhHHHH-HhCCCce--EeCCCCCCccHHHHHHHHhc-CCccEE
Q 018627          195 STVVIFGLGTVGL-SVAQGAKAR-GASRII-GVDTNPEKCEKA-KAFGVTE--FLNPNDNNEPVQQVIKRITD-GGADYS  267 (353)
Q Consensus       195 ~~vLV~Gag~vG~-~a~~la~~~-g~~~vi-~~~~~~~~~~~~-~~~G~~~--~~~~~~~~~~~~~~~~~~~~-~~~dvv  267 (353)
                      =+|.|+|+|.+|. ..+...+.. ++ +++ ++++++++.+.. +++|...  +..+.    ++.    ++.. ..+|+|
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~----d~~----ell~~~~iD~V  104 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYS----NFD----KIAKDPKIDAV  104 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSS----SGG----GGGGCTTCCEE
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccC----chh----hhcccccceee
Confidence            3678889998886 344444443 67 555 567788776655 5677542  33332    122    2222 379999


Q ss_pred             EeccCChHHHHHHHHHhccCCceEEEEcC
Q 018627          268 FECIGDTGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       268 ~d~~g~~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      +-++......+.+.+++..  |.=|.+.-
T Consensus       105 ~I~tp~~~H~~~~~~al~~--gk~v~~EK  131 (221)
T d1h6da1         105 YIILPNSLHAEFAIRAFKA--GKHVMCEK  131 (221)
T ss_dssp             EECSCGGGHHHHHHHHHHT--TCEEEECS
T ss_pred             eeccchhhhhhHHHHhhhc--chhhhcCC
Confidence            9999887778888888886  66666653

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.44  E-value=1.6  Score=37.34  Aligned_cols=102  Identities=17%  Similarity=0.194  Sum_probs=63.2

Q ss_pred             hccCCCCCEEEEEc-C-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhc
Q 018627          188 VADISKGSTVVIFG-L-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITD  261 (353)
Q Consensus       188 ~~~~~~g~~vLV~G-a-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~  261 (353)
                      ..++++|++||-.- | |+-...++++....  ..+++.+.++.|...+    +.+|...++....+...+     ....
T Consensus       111 ~l~~~~g~~vlD~CAapGgKt~~l~~~~~~~--~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~-----~~~~  183 (313)
T d1ixka_         111 ALDPKPGEIVADMAAAPGGKTSYLAQLMRND--GVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHI-----GELN  183 (313)
T ss_dssp             HHCCCTTCEEEECCSSCSHHHHHHHHHTTTC--SEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGG-----GGGC
T ss_pred             cccCCccceeeecccchhhhhHhhhhhcccc--cceeeeccCHHHHHHHHHHHHHHHhhcccccccccccc-----cccc
Confidence            45789999998884 3 54433333332222  3799999999998766    457877665443212111     1123


Q ss_pred             CCccEEEe---ccCCh-------------------------HHHHHHHHHhccCCceEEEEcCC
Q 018627          262 GGADYSFE---CIGDT-------------------------GMITTALQSCCDGWGLAVTLGVP  297 (353)
Q Consensus       262 ~~~dvv~d---~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~~  297 (353)
                      +.||.|+-   |+|..                         ..+..+++.++++ |++|-.-.+
T Consensus       184 ~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~g-G~lVYsTCS  246 (313)
T d1ixka_         184 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTCS  246 (313)
T ss_dssp             CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEESC
T ss_pred             ccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCC-cEEEEeecc
Confidence            47886665   55541                         4567888899997 987765543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=87.23  E-value=0.27  Score=40.23  Aligned_cols=32  Identities=34%  Similarity=0.578  Sum_probs=28.4

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       197 vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      |+|+|+|+.|++++..+...|. +|++++.++.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            8899999999999999999999 8999987653

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=87.19  E-value=2.2  Score=31.67  Aligned_cols=37  Identities=16%  Similarity=0.263  Sum_probs=30.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCC-CeEEEEcCChhhHH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCE  232 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~-~~vi~~~~~~~~~~  232 (353)
                      +|.|+|+|.+|..++..+...+. ++++.+|.++++.+
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~   39 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ   39 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccch
Confidence            57888999999998888888774 68999999887654

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.13  E-value=0.42  Score=40.09  Aligned_cols=105  Identities=13%  Similarity=0.024  Sum_probs=56.7

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHH----C-CC-CeEEEEcCChhhHHHHHhC--CC---ce-EeCCCC-CCccHHHHH
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKA----R-GA-SRIIGVDTNPEKCEKAKAF--GV---TE-FLNPND-NNEPVQQVI  256 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~----~-g~-~~vi~~~~~~~~~~~~~~~--G~---~~-~~~~~~-~~~~~~~~~  256 (353)
                      +.++..+||-+|+| .|.....+++.    . +. -++++++.++.-++.+++.  ..   .. .++... ....+....
T Consensus        37 ~~~~~~~VLDiGcG-~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (280)
T d1jqea_          37 DTKSEIKILSIGGG-AGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRM  115 (280)
T ss_dssp             TTCSEEEEEEETCT-TSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHH
T ss_pred             cCCCCCeEEEEcCC-CCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchh
Confidence            34455579999874 23333333322    2 22 1578999999888877552  11   10 111110 011111122


Q ss_pred             HHH-hcCCccEEEeccC-----C-hHHHHHHHHHhccCCceEEEEcC
Q 018627          257 KRI-TDGGADYSFECIG-----D-TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       257 ~~~-~~~~~dvv~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      ... .++.||+|+-.-.     . ...+....+.|+|+ |.++....
T Consensus       116 ~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         116 LEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             TTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             cccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence            222 2348999886332     2 35678888999997 98877654

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=87.06  E-value=0.71  Score=39.77  Aligned_cols=38  Identities=21%  Similarity=0.256  Sum_probs=32.0

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhH
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKC  231 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~  231 (353)
                      +-++|||+|+ |.+|..++..+...|. +|+++.|+..+.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchh
Confidence            4578999998 9999999999999999 888887876543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=86.88  E-value=0.5  Score=37.41  Aligned_cols=39  Identities=28%  Similarity=0.359  Sum_probs=33.7

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA  236 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~  236 (353)
                      +|.|+|.|-+|+.++.++ +.|. +|+++|.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            578889999999887666 5798 99999999999988865

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=86.77  E-value=0.53  Score=35.90  Aligned_cols=37  Identities=27%  Similarity=0.345  Sum_probs=31.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .-+++|+|+|+|.+|.=++..+..+|++.|+.+.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3467899999999999999999999998888875543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.63  E-value=0.3  Score=40.30  Aligned_cols=33  Identities=24%  Similarity=0.353  Sum_probs=29.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      .|+|+|+|+.|++++..+...|. +|.+++.+++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48899999999999999999998 8999988764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=86.61  E-value=0.84  Score=33.58  Aligned_cols=90  Identities=22%  Similarity=0.344  Sum_probs=53.9

Q ss_pred             CCCCEEEEEcCCh--HH------HHHHHHH---HHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh
Q 018627          192 SKGSTVVIFGLGT--VG------LSVAQGA---KARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT  260 (353)
Q Consensus       192 ~~g~~vLV~Gag~--vG------~~a~~la---~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~  260 (353)
                      ..-++|||+|+|+  +|      .+..|.+   +..|+ +++.+..+++.......+ ++.++-..-..++..+.++.  
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfePlt~e~v~~Ii~~--   80 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEPIHWEVVRKIIEK--   80 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSCCCHHHHHHHHHH--
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeecCCHHHHHHHHHH--
Confidence            3458899999875  44      4555555   55599 899998998876554443 34443221112222222222  


Q ss_pred             cCCccEEEeccCChHHHHHHHHHhcc
Q 018627          261 DGGADYSFECIGDTGMITTALQSCCD  286 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~~~~~~~~~l~~  286 (353)
                       +.+|.|+-+.|+...++.++++...
T Consensus        81 -E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          81 -ERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             -HCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             -hCcCCeEEEeeeehHhHHHHHHHHc
Confidence             3788888888875556666665543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=86.55  E-value=2.7  Score=30.34  Aligned_cols=93  Identities=11%  Similarity=0.092  Sum_probs=60.1

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCCh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT  274 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~~  274 (353)
                      +.++|.|.|.+|..+++.++  +. .|++++.++++.+.++..|...+. -+   ..-.+.+++..-..++.++-+....
T Consensus         1 kHivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd---~~~~~~L~~a~i~~A~~vi~~~~~d   73 (129)
T d2fy8a1           1 RHVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GD---PTRVSDLEKANVRGARAVIVNLESD   73 (129)
T ss_dssp             CCEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SC---TTSHHHHHHTTCTTCSEEEECCSSH
T ss_pred             CEEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-cc---cCCHHHHHHhhhhcCcEEEEeccch
Confidence            35888999999998877664  44 677788899999988888865443 22   2223455554333788888777653


Q ss_pred             H---HHHHHHHHhccCCceEEEEc
Q 018627          275 G---MITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       275 ~---~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .   ..-...+.+.|. .+++..-
T Consensus        74 ~~n~~~~~~~r~~~~~-~~iia~~   96 (129)
T d2fy8a1          74 SETIHCILGIRKIDES-VRIIAEA   96 (129)
T ss_dssp             HHHHHHHHHHHHHCSS-SCEEEEC
T ss_pred             hhhHHHHHHHHHHCCC-ceEEEEE
Confidence            2   233344556665 6666554

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=86.52  E-value=0.66  Score=39.02  Aligned_cols=97  Identities=16%  Similarity=0.186  Sum_probs=63.8

Q ss_pred             ccCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHHh----CCCceEeCCCCCCccHHHHHHHHhcC
Q 018627          189 ADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG  262 (353)
Q Consensus       189 ~~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~~----~G~~~~~~~~~~~~~~~~~~~~~~~~  262 (353)
                      .++.++.+||=+|+| .|..+..+++..  +. +|+++|.+++.++.+++    .+....+...+ ...+      ..++
T Consensus        23 ~~~~~~~~ILDiGcG-~G~~~~~la~~~~~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d-~~~~------~~~~   93 (281)
T d2gh1a1          23 WKITKPVHIVDYGCG-YGYLGLVLMPLLPEGS-KYTGIDSGETLLAEARELFRLLPYDSEFLEGD-ATEI------ELND   93 (281)
T ss_dssp             SCCCSCCEEEEETCT-TTHHHHHHTTTSCTTC-EEEEEECCHHHHHHHHHHHHSSSSEEEEEESC-TTTC------CCSS
T ss_pred             hccCCcCEEEEecCc-CCHHHHHHHHhCCCCC-EEEEEecchhHhhhhhcccccccccccccccc-cccc------cccC
Confidence            356788999999986 477777888765  44 89999999988887754    34322111110 1111      0234


Q ss_pred             CccEEEeccC-----C-hHHHHHHHHHhccCCceEEEEc
Q 018627          263 GADYSFECIG-----D-TGMITTALQSCCDGWGLAVTLG  295 (353)
Q Consensus       263 ~~dvv~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~g  295 (353)
                      .||+|+..-.     . ...+....+.|+|+ |+++.+-
T Consensus        94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             CEEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             CceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            7999986432     2 24578888999997 9988764

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=86.52  E-value=0.38  Score=39.70  Aligned_cols=36  Identities=31%  Similarity=0.457  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .+.+|+|+|+|++|..++..+...|.++++.+|.+.
T Consensus        29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~   64 (247)
T d1jw9b_          29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   64 (247)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence            457999999999999999999999999999997543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.38  E-value=0.34  Score=38.77  Aligned_cols=32  Identities=16%  Similarity=0.379  Sum_probs=28.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .|+|+|+|..|+.++..+...|. +|.++++++
T Consensus         7 DviViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            48899999999999999999998 899998875

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=86.22  E-value=0.61  Score=35.58  Aligned_cols=41  Identities=17%  Similarity=0.211  Sum_probs=34.1

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHH
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE  232 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~  232 (353)
                      ++-.+|.|+|+|.+|..++.++...+..+++.++.++++.+
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~   45 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPE   45 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccch
Confidence            45678999999999999888888888778999998886644

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.96  E-value=0.36  Score=37.41  Aligned_cols=30  Identities=27%  Similarity=0.325  Sum_probs=26.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      .|+|+|+|+.|+.++..+...|. +|..+++
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~   32 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE   32 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence            48899999999999999999999 7877864

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.87  E-value=0.28  Score=39.84  Aligned_cols=98  Identities=19%  Similarity=0.199  Sum_probs=57.5

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHC--CCCeEEEEcCChhhHHHHH----hCCCceEeCCCCCCccHHHHHHHH---h
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRI---T  260 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~--g~~~vi~~~~~~~~~~~~~----~~G~~~~~~~~~~~~~~~~~~~~~---~  260 (353)
                      +..+.++||=+|.+ .|..++.+|+++  +. +|+.++.+++..+.++    +.|...-+...  ..+..+.+.++   .
T Consensus        53 ~~~kpk~ILEiGt~-~G~Sti~la~al~~~g-~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~--~Gd~~e~l~~l~~~~  128 (214)
T d2cl5a1          53 REYSPSLVLELGAY-CGYSAVRMARLLQPGA-RLLTMEMNPDYAAITQQMLNFAGLQDKVTIL--NGASQDLIPQLKKKY  128 (214)
T ss_dssp             HHHCCSEEEEECCT-TSHHHHHHHTTCCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEE--ESCHHHHGGGHHHHS
T ss_pred             HhhCCCEEEEEccC-chhHHHHHHHhCCCcc-EEEEEeccHHHHHHHHHHHHHcCCCccceee--eccccccccchhhcc
Confidence            33455789999864 467777888876  44 9999999998877664    45654322211  23344444333   2


Q ss_pred             c-CCccEEEeccCChHH-----HHHHHHHhccCCceEE
Q 018627          261 D-GGADYSFECIGDTGM-----ITTALQSCCDGWGLAV  292 (353)
Q Consensus       261 ~-~~~dvv~d~~g~~~~-----~~~~~~~l~~~~G~~v  292 (353)
                      . +.||.+|--......     +...+..++++ |.++
T Consensus       129 ~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv  165 (214)
T d2cl5a1         129 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLL  165 (214)
T ss_dssp             CCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             cccccceeeecccccccccHHHHHHHhCccCCC-cEEE
Confidence            2 379977754332211     23344568885 6544

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=85.83  E-value=0.27  Score=40.74  Aligned_cols=32  Identities=28%  Similarity=0.532  Sum_probs=28.6

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      +|+|+|+|..|+.++..+...|. +|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            58999999999999999999999 899997653

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=85.79  E-value=4.8  Score=33.54  Aligned_cols=99  Identities=23%  Similarity=0.242  Sum_probs=62.4

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCCC------------------
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNPN------------------  246 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~~------------------  246 (353)
                      +...++++..|+.-++|..|.+++..++.+|.+-++.+  ..++.+.+.++.+|+.-+....                  
T Consensus        54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~  133 (302)
T d1fcja_          54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASD  133 (302)
T ss_dssp             HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHTS
T ss_pred             HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhhh
Confidence            34456777776666779999999999999998554444  3445677777888876542110                  


Q ss_pred             --------C-CCc--------cHHHHHHHHhcCCccEEEeccCChHHHHHHHHHhc
Q 018627          247 --------D-NNE--------PVQQVIKRITDGGADYSFECIGDTGMITTALQSCC  285 (353)
Q Consensus       247 --------~-~~~--------~~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~~~l~  285 (353)
                              . ...        .....+.+..++.+|.++-++|+..++......++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk  189 (302)
T d1fcja_         134 PQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK  189 (302)
T ss_dssp             TTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred             ccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence                    0 000        12223334444578999999987666655555444

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=85.32  E-value=0.98  Score=37.16  Aligned_cols=102  Identities=16%  Similarity=0.068  Sum_probs=61.8

Q ss_pred             HHHhccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHH
Q 018627          185 AWNVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       185 l~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~  259 (353)
                      +.+..++...++||-+|+| .|..+..+++.. +. ++++++.+ +.++.+    .+.|....+...  ..++.    +.
T Consensus        72 ~~~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~-~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~--~~D~~----~~  142 (253)
T d1tw3a2          72 PAAAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHV-SATVLEMA-GTVDTARSYLKDEGLSDRVDVV--EGDFF----EP  142 (253)
T ss_dssp             HHHHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTC-EEEEEECT-THHHHHHHHHHHTTCTTTEEEE--ECCTT----SC
T ss_pred             HHhhcCCccCCEEEEeCCC-CCHHHHHHHHhccee-EEEEccCH-HHHHHHHHHHHHhhcccchhhc--cccch----hh
Confidence            3455677888999999876 577888888887 55 88888864 333333    334432211110  01110    11


Q ss_pred             hcCCccEEEeccC-----Ch---HHHHHHHHHhccCCceEEEEcC
Q 018627          260 TDGGADYSFECIG-----DT---GMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       260 ~~~~~dvv~d~~g-----~~---~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+.++|+|+-..-     .+   ..+..+.+.|+|+ |+++....
T Consensus       143 ~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         143 LPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             cccchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            2347898885321     11   3467788899997 99998754

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=85.27  E-value=0.82  Score=36.43  Aligned_cols=72  Identities=26%  Similarity=0.373  Sum_probs=46.2

Q ss_pred             HhccCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh-CCCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          187 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       187 ~~~~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      ...++ .|++||-.|+|. |..++. +..+|+++|++++.+++..+.+++ .....++..+     +    .+ .++.||
T Consensus        43 ~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D-----~----~~-l~~~fD  109 (197)
T d1ne2a_          43 NDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD-----V----SE-ISGKYD  109 (197)
T ss_dssp             HHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC-----G----GG-CCCCEE
T ss_pred             HcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEe-----h----hh-cCCcce
Confidence            33444 699999998752 433333 445687789999999999888876 3323333321     1    11 245899


Q ss_pred             EEEecc
Q 018627          266 YSFECI  271 (353)
Q Consensus       266 vv~d~~  271 (353)
                      +||-+-
T Consensus       110 ~Vi~NP  115 (197)
T d1ne2a_         110 TWIMNP  115 (197)
T ss_dssp             EEEECC
T ss_pred             EEEeCc
Confidence            999764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.17  E-value=0.48  Score=34.18  Aligned_cols=65  Identities=11%  Similarity=0.055  Sum_probs=41.4

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCC--eEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhc-CCccEEE
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGAS--RIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD-GGADYSF  268 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~--~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~-~~~dvv~  268 (353)
                      +..++++|+|+|.+|.-++..++.++.+  .|..+.+.+.-            +..-  +.+..+.+.+... .++++.+
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~~i------------L~~~--d~~~~~~l~~~l~~~GV~v~~   83 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGEMI------------LRGF--DHTLREELTKQLTANGIQILT   83 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSS------------STTS--CHHHHHHHHHHHHHTTCEEEE
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccchh------------hccc--chHHHHHHHHHHHhcCcEEEc
Confidence            3468999999999999988887776542  68888664321            1111  3445555544333 3777777


Q ss_pred             ec
Q 018627          269 EC  270 (353)
Q Consensus       269 d~  270 (353)
                      ++
T Consensus        84 ~~   85 (117)
T d1aoga2          84 KE   85 (117)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=84.93  E-value=0.25  Score=38.91  Aligned_cols=35  Identities=23%  Similarity=0.259  Sum_probs=29.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ++..|+|+|+|+.|+.++..+..+|. +|+.+++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            35679999999999999999999999 788876543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.70  E-value=0.45  Score=40.61  Aligned_cols=34  Identities=21%  Similarity=0.324  Sum_probs=29.7

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      -.|+|+|||..|++++..++..|. .+++.+..++
T Consensus         8 ~dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGAGFSGLYALYRLRELGR-SVHVIETAGD   41 (298)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CCEEEECccHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence            358999999999999999999999 8999987653

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.70  E-value=0.88  Score=35.64  Aligned_cols=94  Identities=13%  Similarity=0.118  Sum_probs=55.1

Q ss_pred             CCCCCEEEEEc--CChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHh----CCCce-EeCCCCCCccHHHHHHHHh-cC
Q 018627          191 ISKGSTVVIFG--LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-FLNPNDNNEPVQQVIKRIT-DG  262 (353)
Q Consensus       191 ~~~g~~vLV~G--ag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~----~G~~~-~~~~~~~~~~~~~~~~~~~-~~  262 (353)
                      ...|.+||=..  .|.+|+.+    ...|++.|+.++.+.+..+.+++    ++... +...   ..+..+.+..+. .+
T Consensus        39 ~~~~~~vLDlfaGsG~~g~ea----~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~---~~D~~~~l~~~~~~~  111 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIEA----VSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVR---KMDANRALEQFYEEK  111 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE---ESCHHHHHHHHHHTT
T ss_pred             hcCCCEEEEccccccccccee----eecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccc---cccchhhhhhhcccC
Confidence            45789988874  36677643    33688899999999998887644    45432 2111   234445555442 23


Q ss_pred             -CccEEEeccCC-----hHHHHHHHH--HhccCCceEE
Q 018627          263 -GADYSFECIGD-----TGMITTALQ--SCCDGWGLAV  292 (353)
Q Consensus       263 -~~dvv~d~~g~-----~~~~~~~~~--~l~~~~G~~v  292 (353)
                       .||+||=.-+-     ...++...+  .++++ |.++
T Consensus       112 ~~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~-giIi  148 (182)
T d2fhpa1         112 LQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNE-AVIV  148 (182)
T ss_dssp             CCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             CCcceEEechhhhhhHHHHHHHHHHHCCCCCCC-EEEE
Confidence             89998854221     123333332  36775 6555

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=84.60  E-value=0.36  Score=40.25  Aligned_cols=100  Identities=19%  Similarity=0.109  Sum_probs=61.2

Q ss_pred             HHhccCCCCCEEEEEcCChHHHHHHHHHHHC-CCCeEEEEcCChhhHHHH----HhCCCce-EeCCCCCCccHHHHHHHH
Q 018627          186 WNVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKA----KAFGVTE-FLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~Gag~vG~~a~~la~~~-g~~~vi~~~~~~~~~~~~----~~~G~~~-~~~~~~~~~~~~~~~~~~  259 (353)
                      .+..+++...+||-+|+| .|..+..++++. +. ++++++. ++-.+.+    ++.|... +....   .++.    ..
T Consensus        74 ~~~~d~~~~~~vlDvG~G-~G~~~~~l~~~~P~~-~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~---~d~~----~~  143 (256)
T d1qzza2          74 ADAYDWSAVRHVLDVGGG-NGGMLAAIALRAPHL-RGTLVEL-AGPAERARRRFADAGLADRVTVAE---GDFF----KP  143 (256)
T ss_dssp             HHTSCCTTCCEEEEETCT-TSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE---CCTT----SC
T ss_pred             HhcCCCccCCEEEEECCC-CCHHHHHHHHhhcCc-EEEEecC-hHHHHHHHHHHhhcCCcceeeeee---eecc----cc
Confidence            345567788899999875 578888888887 56 8999986 4434333    3344322 11110   0110    01


Q ss_pred             hcCCccEEEecc-----CC---hHHHHHHHHHhccCCceEEEEcC
Q 018627          260 TDGGADYSFECI-----GD---TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       260 ~~~~~dvv~d~~-----g~---~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      .+.++|+|+-.-     +.   ...+..+.+.|+|+ |+++.+..
T Consensus       144 ~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~Lkpg-G~llI~d~  187 (256)
T d1qzza2         144 LPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPG-GRLLVLDR  187 (256)
T ss_dssp             CSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ccccchhhhccccccccCcHHHHHHHHHHHhhcCCc-ceeEEEEe
Confidence            133689877421     11   13467788899997 99998865

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.56  E-value=0.38  Score=38.44  Aligned_cols=32  Identities=28%  Similarity=0.319  Sum_probs=27.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      -|+|+|+|+.|+.++..+..+|. +|++++..+
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRG   36 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47899999999999999999999 788887643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=84.43  E-value=0.39  Score=37.08  Aligned_cols=27  Identities=41%  Similarity=0.592  Sum_probs=24.6

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCC
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGAS  219 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~  219 (353)
                      .+++|+|+|+|.+|.-++..++.+|.+
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~   28 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWE   28 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCc
Confidence            578999999999999999999999984

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=84.18  E-value=0.85  Score=33.19  Aligned_cols=85  Identities=14%  Similarity=0.151  Sum_probs=46.5

Q ss_pred             CCCEEEEEcCCh--HH------HHHHHH---HHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHh-
Q 018627          193 KGSTVVIFGLGT--VG------LSVAQG---AKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-  260 (353)
Q Consensus       193 ~g~~vLV~Gag~--vG------~~a~~l---a~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-  260 (353)
                      ..++|||+|+|+  +|      .+.+|.   ++..|+ +++.+..+++.......+ +++++-..    -..+.+.+.. 
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lYfep----lt~e~v~~Ii~   76 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLYFEP----VTLEDVLEIVR   76 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEECCC----CSHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceEEcc----CCHHHHHHHHH
Confidence            357899999875  44      444444   456699 888998888875443222 33333211    1112222221 


Q ss_pred             cCCccEEEeccCChHHHHHHHHH
Q 018627          261 DGGADYSFECIGDTGMITTALQS  283 (353)
Q Consensus       261 ~~~~dvv~d~~g~~~~~~~~~~~  283 (353)
                      .+++|.|+-..|+...+..+..+
T Consensus        77 ~E~p~~ii~~~GGQtalnla~~L   99 (121)
T d1a9xa4          77 IEKPKGVIVQYGGQTPLKLARAL   99 (121)
T ss_dssp             HHCCSEEECSSSTHHHHTTHHHH
T ss_pred             HhCCCEEEeehhhhhHHHHHHHH
Confidence            12567777777764444444443

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.04  E-value=5.4  Score=30.31  Aligned_cols=90  Identities=12%  Similarity=0.089  Sum_probs=51.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHCC--CC-eEEEEcCChhh---------------HHHHHhCCCceEeCCCCCCccHHHHHH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARG--AS-RIIGVDTNPEK---------------CEKAKAFGVTEFLNPNDNNEPVQQVIK  257 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g--~~-~vi~~~~~~~~---------------~~~~~~~G~~~~~~~~~~~~~~~~~~~  257 (353)
                      +|.+.|.|.+|..++++.....  .+ +++++..+...               .+.+......        .........
T Consensus         6 ~I~l~G~G~VG~~l~~~l~~~~~~l~~~v~~i~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~   77 (168)
T d1ebfa1           6 NVAVIGAGVVGSAFLDQLLAMKSTITYNLVLLAEAERSLISKDFSPLNVGSDWKAALAASTTK--------TLPLDDLIA   77 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCCCSSEEEEEEEECSSBEEECSSCSCCSCTTCHHHHHHTCCCB--------CCCHHHHHH
T ss_pred             EEEEEeCCHHHHHHHHHHHHhHHHhhhheEEEEEeeeeeecccccchHhhhhhhhhhhhcccc--------cccHHHHHH
Confidence            5678899999999998877542  21 45554322111               1111111110        111211222


Q ss_pred             HHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEE
Q 018627          258 RITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       258 ~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ..... ..++++||.++........+.+..+ -++|+.
T Consensus        78 ~~~~~~~~~vivd~t~~~~~~~~~~~aL~~G-~hVVTA  114 (168)
T d1ebfa1          78 HLKTSPKPVILVDNTSSAYIAGFYTKFVENG-ISIATP  114 (168)
T ss_dssp             HHTTCSSCEEEEECSCCHHHHTTHHHHHHTT-CEEECC
T ss_pred             HhccCCCceEEEEecCChHHHHHHHHHHHcC-CeEEec
Confidence            22223 6789999999977776777788885 666665

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=84.03  E-value=0.21  Score=38.89  Aligned_cols=82  Identities=20%  Similarity=0.286  Sum_probs=52.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHC-CCCeEEEE-cCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKAR-GASRIIGV-DTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~-g~~~vi~~-~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g~  273 (353)
                      +|.|+|.|.+|...+..++.. ++ +++++ ++++++.      ....+..+.    +.    .. ....+|+|+.|++.
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~------~~~~~~~~~----~~----~~-~~~~~D~Vvi~tp~   68 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATLD------TKTPVFDVA----DV----DK-HADDVDVLFLCMGS   68 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCCS------SSSCEEEGG----GG----GG-TTTTCSEEEECSCT
T ss_pred             eEEEECChHHHHHHHHHHHhCCCc-EEEEEEecccccc------cccccccch----hh----hh-hccccceEEEeCCC
Confidence            588999999999888877765 56 55544 4443321      111121111    11    01 12369999999998


Q ss_pred             hHHHHHHHHHhccCCceEEEE
Q 018627          274 TGMITTALQSCCDGWGLAVTL  294 (353)
Q Consensus       274 ~~~~~~~~~~l~~~~G~~v~~  294 (353)
                      ....+.+.+++..+ -.+|+.
T Consensus        69 ~~h~~~a~~aL~aG-~~vv~~   88 (170)
T d1f06a1          69 ATDIPEQAPKFAQF-ACTVDT   88 (170)
T ss_dssp             TTHHHHHHHHHTTT-SEEECC
T ss_pred             cccHHHHHHHHHCC-CcEEEe
Confidence            77888888999985 666654

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=83.93  E-value=0.94  Score=31.72  Aligned_cols=24  Identities=38%  Similarity=0.635  Sum_probs=19.4

Q ss_pred             eeEEEEEeCCCCC----------CCCCCCeEEee
Q 018627           71 ASGIVESVGPGVT----------EFNEGEHVLTV   94 (353)
Q Consensus        71 ~~G~V~~vG~~~~----------~~~vGd~V~~~   94 (353)
                      ..|+|+++|++..          .+++||+|+..
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            4699999998742          47899999876

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=83.75  E-value=3.9  Score=31.30  Aligned_cols=73  Identities=18%  Similarity=0.214  Sum_probs=43.2

Q ss_pred             CCCEEEEEcCChHHHHHH---HHHHH--CCCCeEEEEcCChhhHHHH--------HhCCCceEeCCCCCCccHHHHHHHH
Q 018627          193 KGSTVVIFGLGTVGLSVA---QGAKA--RGASRIIGVDTNPEKCEKA--------KAFGVTEFLNPNDNNEPVQQVIKRI  259 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~---~la~~--~g~~~vi~~~~~~~~~~~~--------~~~G~~~~~~~~~~~~~~~~~~~~~  259 (353)
                      |+-+|.|+|+|.+|....   .+++.  +...+++.+|.++++++..        ..++....+..   ..+..+.+   
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~---~td~~eaL---   74 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK---TMNLDDVI---   74 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE---ESCHHHHH---
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE---eCChhhcc---
Confidence            456789999998885432   23322  2224899999999886632        22443332221   12333333   


Q ss_pred             hcCCccEEEeccCC
Q 018627          260 TDGGADYSFECIGD  273 (353)
Q Consensus       260 ~~~~~dvv~d~~g~  273 (353)
                        .+.|+|+.+++.
T Consensus        75 --~dad~Vv~~~~~   86 (171)
T d1obba1          75 --IDADFVINTAMV   86 (171)
T ss_dssp             --TTCSEEEECCCT
T ss_pred             --cCCCeEeeeccc
Confidence              258999988765

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=83.68  E-value=0.4  Score=41.06  Aligned_cols=32  Identities=25%  Similarity=0.370  Sum_probs=26.7

Q ss_pred             EEEEEcCChHHHHHHHHHH-----HCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAK-----ARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~-----~~g~~~vi~~~~~~  228 (353)
                      .|+|+|+|+.|++++.++.     ..|. +|+++++++
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            5899999999999988874     5699 899998764

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=83.57  E-value=0.47  Score=37.87  Aligned_cols=31  Identities=16%  Similarity=0.293  Sum_probs=27.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      .|+|+|+|+.|+.++..|..+|. +|.+++.+
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            37889999999999999999999 78888764

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.44  E-value=6.6  Score=33.11  Aligned_cols=108  Identities=27%  Similarity=0.226  Sum_probs=64.9

Q ss_pred             HhccCCCCCEEEEE-cCChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCCC-----------------
Q 018627          187 NVADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNPN-----------------  246 (353)
Q Consensus       187 ~~~~~~~g~~vLV~-Gag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~~-----------------  246 (353)
                      +...++.+...+|. .+|..|.+++..++.+|.+-++.+  ..++.|.+.++.+|+.-++...                 
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence            33445566555555 569999999999999999444444  4456788888999986542110                 


Q ss_pred             ----------CCCcc-------HHHHHHHHhcCCccEEEeccCChHHHHHHH---HHhccCCceEEEEc
Q 018627          247 ----------DNNEP-------VQQVIKRITDGGADYSFECIGDTGMITTAL---QSCCDGWGLAVTLG  295 (353)
Q Consensus       247 ----------~~~~~-------~~~~~~~~~~~~~dvv~d~~g~~~~~~~~~---~~l~~~~G~~v~~g  295 (353)
                                +...+       ....+.+...+.+|.++-++|+..++...+   +...+. -+++.+.
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igve  204 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGVE  204 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeeccc
Confidence                      00101       111222233447899999998755554433   445554 6666554

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=83.39  E-value=1.1  Score=33.94  Aligned_cols=40  Identities=15%  Similarity=0.190  Sum_probs=33.8

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHH
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE  232 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~  232 (353)
                      |..+|-|+|+|.+|..++.++...+...++.+|.++++.+
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~   41 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPH   41 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcce
Confidence            4568999999999999998888888889999998876643

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=83.22  E-value=5.9  Score=30.30  Aligned_cols=99  Identities=16%  Similarity=0.218  Sum_probs=57.8

Q ss_pred             EEEEEcCChHHHHHHHHHHHC---CCCeEEEEc--CChhhHHHHHhC----CCce--E--------eCCCC----CCccH
Q 018627          196 TVVIFGLGTVGLSVAQGAKAR---GASRIIGVD--TNPEKCEKAKAF----GVTE--F--------LNPND----NNEPV  252 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~---g~~~vi~~~--~~~~~~~~~~~~----G~~~--~--------~~~~~----~~~~~  252 (353)
                      +|.|.|-|-+|+.+.+.+...   .. .|+++-  .+.+.+.++-++    |...  +        ++-+.    ...+.
T Consensus         2 kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~p   80 (169)
T d1hdgo1           2 RVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPDP   80 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSSG
T ss_pred             EEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCCh
Confidence            688999999999999987643   35 777762  234555555443    2110  1        00000    00000


Q ss_pred             HHHHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          253 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       253 ~~~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                       +.+.+  .+ ++|+|+||+|.-...+.+...+..+ -+-|.+..+..
T Consensus        81 -~~i~W--~~~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~k  124 (169)
T d1hdgo1          81 -SKLPW--KDLGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPAK  124 (169)
T ss_dssp             -GGSCH--HHHTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCB
T ss_pred             -hhCCc--cccCCCEEEEecceeccccchhhhccCC-CceEEEecccC
Confidence             01111  12 7999999999766677888888876 55555555443

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=83.11  E-value=2.3  Score=31.72  Aligned_cols=47  Identities=17%  Similarity=0.049  Sum_probs=36.9

Q ss_pred             HHHHHHHHhccCCCCCEEEEE--cCChHHHHHHHHHHHCCCCeEEEEcCChh
Q 018627          180 AGLGAAWNVADISKGSTVVIF--GLGTVGLSVAQGAKARGASRIIGVDTNPE  229 (353)
Q Consensus       180 ta~~al~~~~~~~~g~~vLV~--Gag~vG~~a~~la~~~g~~~vi~~~~~~~  229 (353)
                      |....+  ..+..+++.++|.  |+|-+|+-+++.+..+|. +|..+.+.+.
T Consensus        27 t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~~   75 (156)
T d1djqa2          27 TPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVHL   75 (156)
T ss_dssp             CHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSCT
T ss_pred             CHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCc
Confidence            444444  3567788999887  668899999999999999 8888877653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.11  E-value=1  Score=38.50  Aligned_cols=33  Identities=18%  Similarity=0.405  Sum_probs=29.3

Q ss_pred             CCCEEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcC
Q 018627          193 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT  226 (353)
Q Consensus       193 ~g~~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~  226 (353)
                      .-++|||+|+ |-+|..++..+...|. +|+++++
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~   48 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN   48 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence            4578999998 8999999999999999 9999865

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.09  E-value=0.53  Score=39.62  Aligned_cols=32  Identities=34%  Similarity=0.524  Sum_probs=27.3

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      .|+|+|+|.+|++++.-+...|.++|++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            48999999999998888878897579898765

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=83.05  E-value=0.56  Score=38.71  Aligned_cols=32  Identities=16%  Similarity=0.230  Sum_probs=28.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .|+|+|+|.+|++++.-+...|. +|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999999999999998 899998754

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=82.97  E-value=0.46  Score=40.37  Aligned_cols=32  Identities=19%  Similarity=0.342  Sum_probs=28.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .|||+|||..|+.++..+...|. +|.+++.++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCC
Confidence            48999999999999999988898 899997764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=82.90  E-value=5  Score=30.74  Aligned_cols=99  Identities=24%  Similarity=0.319  Sum_probs=61.0

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEE-cC--ChhhHHHHHhC----CCce--E--------eCCCC----CCccHHH
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGV-DT--NPEKCEKAKAF----GVTE--F--------LNPND----NNEPVQQ  254 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~-~~--~~~~~~~~~~~----G~~~--~--------~~~~~----~~~~~~~  254 (353)
                      +|-|.|-|-+|+++.+.+...+. .++++ +.  +.+.+.++-++    |...  +        ++-+.    ...+. +
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p-~   79 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP-E   79 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG-G
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh-H
Confidence            57889999999999999988888 66666 32  34566666553    2111  0        10000    00000 0


Q ss_pred             HHHHHhcC-CccEEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          255 VIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       255 ~~~~~~~~-~~dvv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      .+.+  .+ ++|+|+||+|.-...+.+...+..+ -+-|.+..+..
T Consensus        80 ~i~W--~~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~~  122 (169)
T d1dssg1          80 NIPW--SKAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPSA  122 (169)
T ss_dssp             GCCH--HHHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCCS
T ss_pred             HCCc--cccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCcc
Confidence            1111  12 7999999999866777888888886 66666665443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=82.89  E-value=0.55  Score=39.04  Aligned_cols=61  Identities=18%  Similarity=0.354  Sum_probs=36.9

Q ss_pred             EEEEEcC-ChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccCC
Q 018627          196 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD  273 (353)
Q Consensus       196 ~vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g~  273 (353)
                      +|||+|+ |-+|..++..+...|  +++++++....      +-    .|..  +  . +.+.+...+ ++|+||++++.
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g--~~v~~~~~~~~------~~----~Dl~--~--~-~~~~~~i~~~~~D~Vih~Aa~   64 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG--NLIALDVHSKE------FC----GDFS--N--P-KGVAETVRKLRPDVIVNAAAH   64 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS--EEEEECTTCSS------SC----CCTT--C--H-HHHHHHHHHHCCSEEEECCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC--CEEEEECCCcc------cc----CcCC--C--H-HHHHHHHHHcCCCEEEEeccc
Confidence            6999998 999999988777666  45555444321      10    1121  1  1 223332223 78999998863

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=82.76  E-value=3.3  Score=35.29  Aligned_cols=95  Identities=12%  Similarity=0.118  Sum_probs=63.8

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHH-CCCCeEEEEcCChhhHHHH----HhCCCceEeCCCCCCccHHHHHHHHhcCCcc
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDGGAD  265 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~-~g~~~vi~~~~~~~~~~~~----~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~d  265 (353)
                      .+..+++.|+|+|..+...++.+.. ...++|.+.++++++.+.+    +..+.....+.       .+.+     .+.|
T Consensus       122 ~~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-------~~a~-----~~aD  189 (320)
T d1omoa_         122 RKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-------AEEA-----SRCD  189 (320)
T ss_dssp             CTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-------HHHH-----TSSS
T ss_pred             cCCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-------hhhh-----cccc
Confidence            3455788899999988777776654 5788999999999887654    34554433321       1222     2589


Q ss_pred             EEEeccCChHHHHHHHHHhccCCceEEEEcCCCC
Q 018627          266 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL  299 (353)
Q Consensus       266 vv~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~  299 (353)
                      +|+-|+.+...+-. .+.++++ -++..+|....
T Consensus       190 iV~taT~s~~P~~~-~~~l~~G-~hv~~iGs~~p  221 (320)
T d1omoa_         190 VLVTTTPSRKPVVK-AEWVEEG-THINAIGADGP  221 (320)
T ss_dssp             EEEECCCCSSCCBC-GGGCCTT-CEEEECSCCST
T ss_pred             EEEEeccCcccccc-hhhcCCC-CeEeecCCccc
Confidence            99988876433211 1468886 88999998654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=82.76  E-value=1.8  Score=35.67  Aligned_cols=72  Identities=15%  Similarity=0.266  Sum_probs=41.9

Q ss_pred             EEEEcC-ChHHHHHHHHHHHCCCCeEEEEc--CChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcC-CccEEEeccC
Q 018627          197 VVIFGL-GTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG  272 (353)
Q Consensus       197 vLV~Ga-g~vG~~a~~la~~~g~~~vi~~~--~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~~dvv~d~~g  272 (353)
                      |||+|+ |-+|..++..+...|...|++++  ++..+...+.+.-.....+.    .+....+.....- ..++++...+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDK----EDFLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEH----HHHHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccc----hHHHHHHhhhhcccchhhhhhhcc
Confidence            799988 88999999988888975788875  23333344444443333221    2222222222222 5677776653

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.24  E-value=0.63  Score=36.97  Aligned_cols=30  Identities=23%  Similarity=0.360  Sum_probs=26.7

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       197 vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      |+|+|+|+.|+.++..|..+|. +|.+++..
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            7888999999999999999999 78888654

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.23  E-value=0.56  Score=37.55  Aligned_cols=31  Identities=29%  Similarity=0.319  Sum_probs=27.9

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      .++|+|+|+.|+.++..++.+|. +|.+++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47899999999999999999999 89988764

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=82.17  E-value=4.4  Score=35.44  Aligned_cols=54  Identities=15%  Similarity=0.132  Sum_probs=39.9

Q ss_pred             cCCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEc--CChhhHHHHHhCCCceEe
Q 018627          190 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFL  243 (353)
Q Consensus       190 ~~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~--~~~~~~~~~~~~G~~~~~  243 (353)
                      +++++++|+--.+|..|.+++..|+.+|.+-++.+.  .++.|.+.++.+|++-+.
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~  195 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIV  195 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEE
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceee
Confidence            467777654445688999999999999994444443  355788888999987654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.17  E-value=1  Score=35.60  Aligned_cols=68  Identities=19%  Similarity=0.337  Sum_probs=41.7

Q ss_pred             CEEEEEcC-ChHHHHHHHHHHHCCCC-eEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEeccC
Q 018627          195 STVVIFGL-GTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG  272 (353)
Q Consensus       195 ~~vLV~Ga-g~vG~~a~~la~~~g~~-~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~~g  272 (353)
                      ++|||+|+ |.+|..++..+...|.. +|++..+++..        ...-+...  ..++.+.. ....+..|.|+.|+|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~--------~~~~~~~~--~~d~~~~~-~~~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNP--VGPLAELL-PQLDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECC--BSCHHHHG-GGCCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh--------hccccccc--ccchhhhh-hccccchheeeeeee
Confidence            78999998 89999999988888752 56666544321        11111111  22333332 223347899999987


Q ss_pred             C
Q 018627          273 D  273 (353)
Q Consensus       273 ~  273 (353)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.03  E-value=2.4  Score=30.74  Aligned_cols=60  Identities=22%  Similarity=0.230  Sum_probs=47.1

Q ss_pred             HHhccCCCCCEEEEE-cCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCC
Q 018627          186 WNVADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP  245 (353)
Q Consensus       186 ~~~~~~~~g~~vLV~-Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~  245 (353)
                      ++.++++.-+.+++. ..-..-..++++++.+|.+++++...+++..+.++++|++.+++.
T Consensus        58 l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p  118 (132)
T d1lssa_          58 LEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSP  118 (132)
T ss_dssp             HHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECH
T ss_pred             hhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECH
Confidence            355677776766654 334466788889999999889999899999999999999988864

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.73  E-value=0.56  Score=39.76  Aligned_cols=31  Identities=23%  Similarity=0.426  Sum_probs=27.7

Q ss_pred             EEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          197 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       197 vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      |+|+|+|..|++++..++..|. +|++++.++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7899999999999999999999 899997644

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.73  E-value=0.71  Score=39.54  Aligned_cols=33  Identities=24%  Similarity=0.366  Sum_probs=28.6

Q ss_pred             CEE-EEEcC-ChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          195 STV-VIFGL-GTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       195 ~~v-LV~Ga-g~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      ++| ||+|+ |-+|..++..+...|+ +|+++++..
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            357 99998 8899999999999999 999998754

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=81.66  E-value=1.6  Score=34.33  Aligned_cols=90  Identities=21%  Similarity=0.232  Sum_probs=58.2

Q ss_pred             CCCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCChhhHHHHHhCCCceEeCCCCCCccHHHHHHHHhcCCccEEEec
Q 018627          191 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC  270 (353)
Q Consensus       191 ~~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~dvv~d~  270 (353)
                      +.++.+||-+|+| .|..+..+     . ++++++.+++.++.+++.+...+....   .++     ...++.||+|+..
T Consensus        34 ~~~~~~vLDiGcG-~G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~~~~d~---~~l-----~~~~~~fD~I~~~   98 (208)
T d1vlma_          34 LLPEGRGVEIGVG-TGRFAVPL-----K-IKIGVEPSERMAEIARKRGVFVLKGTA---ENL-----PLKDESFDFALMV   98 (208)
T ss_dssp             HCCSSCEEEETCT-TSTTHHHH-----T-CCEEEESCHHHHHHHHHTTCEEEECBT---TBC-----CSCTTCEEEEEEE
T ss_pred             hCCCCeEEEECCC-Cccccccc-----c-eEEEEeCChhhcccccccccccccccc---ccc-----ccccccccccccc
Confidence            4567789999975 24433333     2 578999999999999887654433211   111     0123479999874


Q ss_pred             cC-----C-hHHHHHHHHHhccCCceEEEEcC
Q 018627          271 IG-----D-TGMITTALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       271 ~g-----~-~~~~~~~~~~l~~~~G~~v~~g~  296 (353)
                      -.     . ...+....+.|+++ |+++....
T Consensus        99 ~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~~  129 (208)
T d1vlma_          99 TTICFVDDPERALKEAYRILKKG-GYLIVGIV  129 (208)
T ss_dssp             SCGGGSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccchhhhhhcCCCC-ceEEEEec
Confidence            32     2 24578888999997 99887653

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.26  E-value=0.7  Score=36.99  Aligned_cols=32  Identities=31%  Similarity=0.331  Sum_probs=27.4

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      .|+|+|+|+-|+.++..|..+|. +|++++..+
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47889999999999999999999 788887653

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.04  E-value=1.9  Score=35.12  Aligned_cols=33  Identities=30%  Similarity=0.480  Sum_probs=28.0

Q ss_pred             CCCCEEEEEcCChHHHHHHHHH-HHCCCCeEEEEc
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGA-KARGASRIIGVD  225 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la-~~~g~~~vi~~~  225 (353)
                      -.|.+|+|.|.|.+|..+++.+ +..|+ +|++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            4689999999999999999887 56799 777764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=80.85  E-value=0.92  Score=38.44  Aligned_cols=32  Identities=28%  Similarity=0.427  Sum_probs=29.3

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCCCCeEEEEc
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD  225 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~  225 (353)
                      .|++|+|.|.|.+|..+++.+...|+ +|++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            58999999999999999999999999 887774

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=80.70  E-value=0.78  Score=36.93  Aligned_cols=32  Identities=31%  Similarity=0.403  Sum_probs=28.1

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCCh
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP  228 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~~  228 (353)
                      -|+|+|+|+-|+.++..+..+|. +|.+++..+
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            47888999999999999999999 888887654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=80.58  E-value=0.77  Score=38.02  Aligned_cols=31  Identities=23%  Similarity=0.490  Sum_probs=27.5

Q ss_pred             EEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          196 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       196 ~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      .|+|+|+|.+|++++.-+...|. +|+++++.
T Consensus         5 DvvIIGaGi~Gls~A~~La~~G~-~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAF   35 (281)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCC
Confidence            38899999999999999999999 89999764

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.50  E-value=0.77  Score=35.96  Aligned_cols=32  Identities=16%  Similarity=0.113  Sum_probs=27.3

Q ss_pred             CEEEEEcCChHHHHHHHHHHHCCCCeEEEEcCC
Q 018627          195 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTN  227 (353)
Q Consensus       195 ~~vLV~Gag~vG~~a~~la~~~g~~~vi~~~~~  227 (353)
                      .+|+|+|+|+.|+.++..+...|. ++++++..
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            579999999999999999999999 77777643

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=80.27  E-value=3.4  Score=35.11  Aligned_cols=103  Identities=17%  Similarity=0.217  Sum_probs=61.9

Q ss_pred             CCCCEEEEEcCChHHHHHHHHHHHCCCCeEEEE--cCChhhHHHHHhCCCceEeCCCC----------------------
Q 018627          192 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGV--DTNPEKCEKAKAFGVTEFLNPND----------------------  247 (353)
Q Consensus       192 ~~g~~vLV~Gag~vG~~a~~la~~~g~~~vi~~--~~~~~~~~~~~~~G~~~~~~~~~----------------------  247 (353)
                      .+..+|+...+|..|.+++..++..|.+.++.+  ..+.+|.+.++.+|++-+..-.+                      
T Consensus        73 ~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (331)
T d1tdja1          73 QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP  152 (331)
T ss_dssp             SCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred             CCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence            345556665668889999999999999544444  33456788889999875432111                      


Q ss_pred             -CCcc-------HHHHHHHHhcCCccEEEeccCChHHHH---HHHHHhccCCceEEEEcC
Q 018627          248 -NNEP-------VQQVIKRITDGGADYSFECIGDTGMIT---TALQSCCDGWGLAVTLGV  296 (353)
Q Consensus       248 -~~~~-------~~~~~~~~~~~~~dvv~d~~g~~~~~~---~~~~~l~~~~G~~v~~g~  296 (353)
                       ....       ....+.+. .+.+|.||-++|+..++.   ..++.+.+. -+++.+..
T Consensus       153 ~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve~  210 (331)
T d1tdja1         153 FDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVEA  210 (331)
T ss_dssp             SCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEEE
T ss_pred             cCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEecc
Confidence             0000       11111111 236899999998755543   344455565 67777753

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=80.15  E-value=1.5  Score=32.86  Aligned_cols=40  Identities=30%  Similarity=0.412  Sum_probs=32.7

Q ss_pred             CCCEEEEEcCChHHHHHHHHHHHCC-CCeEEEEcCChhhHH
Q 018627          193 KGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCE  232 (353)
Q Consensus       193 ~g~~vLV~Gag~vG~~a~~la~~~g-~~~vi~~~~~~~~~~  232 (353)
                      ...+|.|+|+|.+|..++..+...+ +.+++.+|.++++.+
T Consensus         4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~   44 (146)
T d1ez4a1           4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTK   44 (146)
T ss_dssp             TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhH
Confidence            3568999999999999888888776 358999999887644