Citrus Sinensis ID: 018718

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
MTFLSFLAVVFLLLPPSAVQSRFKSRNTFLCFSICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGHLKSVKNNPDLRSAYEEVRELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATALAYVTCSFSGDLDNTSIIDQILKLRLEKAKLLDIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINEVWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWKIGVTRTQVIPTIPEDGYFCSFRHKFASL
ccHHHHHHHHHHcccHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccHHHHccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccccccEEEEEcccccEEEEEEccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccHHHHHcHHHHHHHcccccccccccccccccccccccHHcHHHHHHHHccccccccccccccHHHHHccc
ccHHHHHHHHHHHccHHHHHHHHHcHHHHHHHHHHccHHHHHccHHHHHHHHHHHccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHEHEEEccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHccHccHHHHHHHHHHHHccccccccccEEEEEEEcccccEEEEEEEccccccccccccccHHHHHHHHHHHccccccEEccEEEEEEcccccccccccEEcccHHHHHHHccHHHHHEEEEccccccccccccccEEEccccccccHHHHHHcccccccHHHHHHHHHHHHHHc
MTFLSFLAVVFLllppsavqsrfksrntflcfsicpspasaatSMAATGAVvdglslednpllqdfeiighlksvknnpdlrSAYEEVRELGKLSIDFSENVLDATKRFETFVTdkkeiqglpatALAYVTCsfsgdldntSIIDQILKLRLEKAKLLDIEDLRSFCkgqgaleprevnhwdinfwserlceskydinevwnddvrfyrvkdssgspiayfyfdpyscpsekkgsaRICEVFsqsrvltldgattrlpvvhmvcnqtppvgdkpslmtfsetVFHEFGHALQRMLTKQdeglvagsrgiewdavelstnnswkigvtrtqviptipedgyfcsfrhkfasl
MTFLSFLAVVFLLLPPSAVQSRFKSRNTFLCFSICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGhlksvknnpdLRSAYEEVRELGKlsidfsenvlDATKRFETFVTDKKEIQGLPATALAYVTCSFSGDLDNTSIIDQILKLRLEKAKLLDIEDLRSFCkgqgaleprevnhWDINFWSERLCESKYDINEVWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVelstnnswkigvtRTQVIPTIPEDGYFCSFRHKFASL
MTflsflavvflllppsavQSRFKSRNTFLCFSICpspasaatsmaatgaVVDGLSLEDNPLLQDFEIIGHLKSVKNNPDLRSAYEEVRELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATALAYVTCSFSGDLDNTSIIDQILKLRLEKAKLLDIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINEVWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWKIGVTRTQVIPTIPEDGYFCSFRHKFASL
**FLSFLAVVFLLLPPSAVQSRFKSRNTFLCFSICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGHLKSVKNNPDLRSAYEEVRELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATALAYVTCSFSGDLDNTSIIDQILKLRLEKAKLLDIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINEVWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWKIGVTRTQVIPTIPEDGYFCSFRHK****
*TFLSFLAVVFLLLPPSAVQSRFKSRNTFLCFSICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGHL*************EEVRELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATALAYVTCSFSGDLDNTSIIDQILKLRLEKAKLLDIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINEVWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVL****ATTRLPVVHMVCNQTPPVGDKPSLMTFSETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWKIGVTRTQVIPTIPEDGYFCSFRHKFAS*
MTFLSFLAVVFLLLPPSAVQSRFKSRNTFLCFSICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGHLKSVKNNPDLRSAYEEVRELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATALAYVTCSFSGDLDNTSIIDQILKLRLEKAKLLDIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINEVWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWKIGVTRTQVIPTIPEDGYFCSFRHKFASL
*TFLSFLAVVFLLLPPSAVQSRFKSRNTFLCFSICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGHLKSVKNNPDLRSAYEEVRELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATALAYVTCSFSGDLDNTSIIDQILKLRLEKAKLLDIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINEVWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWKIGVTRTQVIPTIPEDGYFCSFRHKFAS*
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MTFLSFLAVVFLLLPPSAVQSRFKSRNTFLCFSICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGHLKSVKNNPDLRSAYEEVRELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATALAYVTCSFSGDLDNTSIIDQILKLRLEKAKLLDIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINEVWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWKIGVTRTQVIPTIPEDGYFCSFRHKFASL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query351 2.2.26 [Sep-21-2011]
P44573 681 Oligopeptidase A OS=Haemo yes no 0.703 0.362 0.265 7e-26
P27237 680 Oligopeptidase A OS=Salmo yes no 0.703 0.363 0.263 2e-23
P27298 680 Oligopeptidase A OS=Esche N/A no 0.703 0.363 0.263 3e-22
Q1JPJ8 687 Thimet oligopeptidase OS= yes no 0.475 0.243 0.271 4e-12
Q8C1A5 687 Thimet oligopeptidase OS= yes no 0.444 0.227 0.273 1e-11
P47788 687 Thimet oligopeptidase OS= yes no 0.475 0.243 0.266 3e-11
P24155 687 Thimet oligopeptidase OS= yes no 0.444 0.227 0.268 3e-11
P52888 689 Thimet oligopeptidase OS= yes no 0.475 0.242 0.257 8e-11
P42676 704 Neurolysin, mitochondrial no no 0.561 0.279 0.239 5e-10
P42675 704 Neurolysin, mitochondrial yes no 0.447 0.223 0.269 7e-10
>sp|P44573|OPDA_HAEIN Oligopeptidase A OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=prlC PE=3 SV=1 Back     alignment and function desciption
 Score =  118 bits (295), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 158/380 (41%), Gaps = 133/380 (35%)

Query: 63  LQDFEIIGHLKSVKNNPDLRSAYEE-VRELGKLSIDFSENVLDATKRFETFVTDKKEIQG 121
           L+DFE+ G    +  + + +  Y E V  L +L+  FS NVLDAT  +E  + ++ E+ G
Sbjct: 135 LRDFELSG----IGLSEEKQQRYGEIVARLSELNSQFSNNVLDATMGWEKLIENEAELAG 190

Query: 122 LPATAL------------------------------------------AYVTCSF----- 134
           LP +AL                                          AY T +      
Sbjct: 191 LPESALQAAQQSAESKGLKGYRFTLEIPSYLPVMTYCENRALREEMYRAYATRASEQGPN 250

Query: 135 SGDLDNTSIIDQILKLRLEKAKLL------------------------------------ 158
           +G  DN+ ++++IL LR+E AKLL                                    
Sbjct: 251 AGKWDNSKVMEEILTLRVELAKLLGFNTYTELSLATKMAENPQQVLDFLDHLAERAKPQG 310

Query: 159 --DIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINE----------------- 199
             ++++L+ +C+ +  +   E+  WDI F+SE+  +  Y IN+                 
Sbjct: 311 EKELQELKGYCEKEFGV--TELAPWDIGFYSEKQKQHLYAINDEELRPYFPENRVISGLF 368

Query: 200 ------------------VWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEV 241
                              W+ DVRF+ + D +      FY D Y+    K+G A + + 
Sbjct: 369 ELIKRIFNIRAVERKGVDTWHKDVRFFDLIDENDQLRGSFYLDLYA-REHKRGGAWMDDC 427

Query: 242 FSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSE--TVFHEFGHALQRMLTKQD 299
             + R   LDG +   PV ++ CN   P+G+KP+L T +E  T+FHEFGH +  MLT+ D
Sbjct: 428 IGRKR--KLDG-SIETPVAYLTCNFNAPIGNKPALFTHNEVTTLFHEFGHGIHHMLTQID 484

Query: 300 EGLVAGSRGIEWDAVELSTN 319
              VAG  G+ WDAVEL + 
Sbjct: 485 VSDVAGINGVPWDAVELPSQ 504
May play a specific role in the degradation of signal peptides after they are released from precursor forms of secreted proteins. Can cleave N-acetyl-L-Ala(4).
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 7EC: 0
>sp|P27237|OPDA_SALTY Oligopeptidase A OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=prlC PE=1 SV=1 Back     alignment and function description
>sp|P27298|OPDA_ECOLI Oligopeptidase A OS=Escherichia coli (strain K12) GN=prlC PE=3 SV=3 Back     alignment and function description
>sp|Q1JPJ8|THOP1_BOVIN Thimet oligopeptidase OS=Bos taurus GN=THOP1 PE=2 SV=3 Back     alignment and function description
>sp|Q8C1A5|THOP1_MOUSE Thimet oligopeptidase OS=Mus musculus GN=Thop1 PE=1 SV=1 Back     alignment and function description
>sp|P47788|THOP1_PIG Thimet oligopeptidase OS=Sus scrofa GN=THOP1 PE=2 SV=2 Back     alignment and function description
>sp|P24155|THOP1_RAT Thimet oligopeptidase OS=Rattus norvegicus GN=Thop1 PE=1 SV=4 Back     alignment and function description
>sp|P52888|THOP1_HUMAN Thimet oligopeptidase OS=Homo sapiens GN=THOP1 PE=1 SV=2 Back     alignment and function description
>sp|P42676|NEUL_RAT Neurolysin, mitochondrial OS=Rattus norvegicus GN=Nln PE=1 SV=1 Back     alignment and function description
>sp|P42675|NEUL_RABIT Neurolysin, mitochondrial OS=Oryctolagus cuniculus GN=NLN PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
356531379 771 PREDICTED: oligopeptidase A-like [Glycin 0.712 0.324 0.478 2e-83
356496657 787 PREDICTED: oligopeptidase A-like [Glycin 0.712 0.317 0.470 2e-82
8978290 714 oligopeptidase A [Arabidopsis thaliana] 0.658 0.323 0.495 3e-81
18424970 791 Zincin-like metalloproteases family prot 0.658 0.292 0.495 7e-81
297794163 790 peptidase M3 family protein [Arabidopsis 0.658 0.292 0.495 1e-80
297807083 695 hypothetical protein ARALYDRAFT_487887 [ 0.780 0.394 0.448 1e-79
224127142 695 predicted protein [Populus trichocarpa] 0.712 0.359 0.469 2e-79
163889371 700 oligopeptidase A [Medicago truncatula] 0.772 0.387 0.435 2e-79
255572579 780 oligopeptidase A, putative [Ricinus comm 0.772 0.347 0.444 3e-79
7671449 723 oligopeptidase A-like protein [Arabidops 0.777 0.377 0.444 4e-79
>gi|356531379|ref|XP_003534255.1| PREDICTED: oligopeptidase A-like [Glycine max] Back     alignment and taxonomy information
 Score =  315 bits (808), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 189/395 (47%), Positives = 215/395 (54%), Gaps = 145/395 (36%)

Query: 50  AVVDGLSLEDNPLLQDFEIIGHLKSVKNNPDLRSAYEEV-RELGKLSIDFSENVLDATKR 108
           AV++G+SLED                    D R ++ ++ +EL KLS  F ENVLDATK+
Sbjct: 212 AVLNGVSLED--------------------DKRESFNKIEQELEKLSQKFGENVLDATKK 251

Query: 109 FETFVTDKKEIQGLPATAL----------------------------------------- 127
           FE  +TDKKEI+GLPATAL                                         
Sbjct: 252 FEKLITDKKEIEGLPATALGLAAQSAVSKGHENATAENGPWIITLDAPSFIAVMQHARNR 311

Query: 128 --------AYVTCSFSGDLDNTSIIDQILKLRLEKAKLL--------------------- 158
                   AYVT + SGDLDNT IIDQILKLRLEKAKLL                     
Sbjct: 312 SLREEIYRAYVTRASSGDLDNTGIIDQILKLRLEKAKLLNYNNYAEVSMATKMATVDKAE 371

Query: 159 ----------------DIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINE--- 199
                           DIEDL+ F K QGALE  ++ HWDI FWSERL ESKYDINE   
Sbjct: 372 ELLEKLRRASWDPAVQDIEDLKEFSKSQGALEAGDLTHWDITFWSERLRESKYDINEEEL 431

Query: 200 ---------------------------------VWNDDVRFYRVKDSSGSPIAYFYFDPY 226
                                            VWN+DVRF+ VKDSSGSPIAYFYFDPY
Sbjct: 432 RPFFSLPKVMDGLFNLAKSLFGIEIEPADGLAPVWNNDVRFFCVKDSSGSPIAYFYFDPY 491

Query: 227 SCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFS--ETVF 284
           S P+EK+  A + EVF++SRVL+ DG + RLPV HMVCNQTPPVG+KPSLMTF   ETVF
Sbjct: 492 SRPAEKRQGAWMDEVFARSRVLSRDGTSARLPVAHMVCNQTPPVGNKPSLMTFREVETVF 551

Query: 285 HEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTN 319
           HEFGHALQ MLTKQDEGLVAG RGIEWDAVEL + 
Sbjct: 552 HEFGHALQHMLTKQDEGLVAGIRGIEWDAVELPSQ 586

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356496657|ref|XP_003517182.1| PREDICTED: oligopeptidase A-like [Glycine max] Back     alignment and taxonomy information
>gi|8978290|dbj|BAA98181.1| oligopeptidase A [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|18424970|ref|NP_569013.1| Zincin-like metalloproteases family protein [Arabidopsis thaliana] gi|15028227|gb|AAK76610.1| putative oligopeptidase A [Arabidopsis thaliana] gi|23297000|gb|AAN13220.1| putative oligopeptidase A [Arabidopsis thaliana] gi|332010695|gb|AED98078.1| Zincin-like metalloproteases family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297794163|ref|XP_002864966.1| peptidase M3 family protein [Arabidopsis lyrata subsp. lyrata] gi|297310801|gb|EFH41225.1| peptidase M3 family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297807083|ref|XP_002871425.1| hypothetical protein ARALYDRAFT_487887 [Arabidopsis lyrata subsp. lyrata] gi|297317262|gb|EFH47684.1| hypothetical protein ARALYDRAFT_487887 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224127142|ref|XP_002319998.1| predicted protein [Populus trichocarpa] gi|222860771|gb|EEE98313.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|163889371|gb|ABY48141.1| oligopeptidase A [Medicago truncatula] Back     alignment and taxonomy information
>gi|255572579|ref|XP_002527223.1| oligopeptidase A, putative [Ricinus communis] gi|223533399|gb|EEF35149.1| oligopeptidase A, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|7671449|emb|CAB89389.1| oligopeptidase A-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query351
TAIR|locus:2155705 791 AT5G65620 [Arabidopsis thalian 0.350 0.155 0.755 4.5e-96
TAIR|locus:2142484 701 AT5G10540 [Arabidopsis thalian 0.350 0.175 0.724 5.4e-81
UNIPROTKB|Q9KVF8 680 VC0188 "Oligopeptidase A" [Vib 0.339 0.175 0.410 3.2e-34
TIGR_CMR|VC_0188 680 VC_0188 "oligopeptidase A" [Vi 0.339 0.175 0.410 3.2e-34
TIGR_CMR|CPS_4986 683 CPS_4986 "oligopeptidase A" [C 0.341 0.175 0.406 3.8e-33
TIGR_CMR|CBU_0039 677 CBU_0039 "oligopeptidase A" [C 0.341 0.177 0.414 2.3e-30
UNIPROTKB|P27298 680 prlC [Escherichia coli K-12 (t 0.358 0.185 0.377 5.6e-30
TIGR_CMR|SO_4699 679 SO_4699 "oligopeptidase A" [Sh 0.327 0.169 0.406 6.8e-26
TIGR_CMR|SO_3564 716 SO_3564 "peptidyl-dipeptidase 0.330 0.162 0.395 2e-14
UNIPROTKB|E1C0D8 567 NLN "Uncharacterized protein" 0.333 0.206 0.364 3.3e-14
TAIR|locus:2155705 AT5G65620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 496 (179.7 bits), Expect = 4.5e-96, Sum P(6) = 4.5e-96
 Identities = 96/127 (75%), Positives = 106/127 (83%)

Query:   200 VWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPV 259
             VWN+DVRFYRVKDSSG+PIAYFYFDPYS PSEK+G A + EV S+SRV+   G++ RLPV
Sbjct:   484 VWNNDVRFYRVKDSSGNPIAYFYFDPYSRPSEKRGGAWMDEVVSRSRVMAQKGSSVRLPV 543

Query:   260 VHMVCNQTPPVGDKPSLMTFSE--TVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELS 317
              HMVCNQTPPVGDKPSLMTF E  TVFHEFGHALQ MLTKQDEGLVAG R IEWDAVEL 
Sbjct:   544 AHMVCNQTPPVGDKPSLMTFREVETVFHEFGHALQHMLTKQDEGLVAGIRNIEWDAVELP 603

Query:   318 TN--NSW 322
             +    +W
Sbjct:   604 SQFMENW 610
GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS
GO:0005739 "mitochondrion" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
GO:0005829 "cytosol" evidence=RCA;IDA
GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA
TAIR|locus:2142484 AT5G10540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KVF8 VC0188 "Oligopeptidase A" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0188 VC_0188 "oligopeptidase A" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_4986 CPS_4986 "oligopeptidase A" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0039 CBU_0039 "oligopeptidase A" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|P27298 prlC [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_4699 SO_4699 "oligopeptidase A" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
TIGR_CMR|SO_3564 SO_3564 "peptidyl-dipeptidase Dcp" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|E1C0D8 NLN "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.24LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
cd06456 654 cd06456, M3A_DCP, Peptidase family M3 dipeptidyl c 2e-71
cd09605 590 cd09605, M3A, Peptidase M3A family includes Thimet 2e-58
COG0339 683 COG0339, Dcp, Zn-dependent oligopeptidases [Amino 7e-56
PRK10911 680 PRK10911, PRK10911, oligopeptidase A; Provisional 3e-33
cd06455 637 cd06455, M3A_TOP, Peptidase M3 Thimet oligopeptida 7e-30
pfam01432 450 pfam01432, Peptidase_M3, Peptidase family M3 1e-27
cd06457 606 cd06457, M3A_MIP, Peptidase M3 mitochondrial inter 7e-18
PRK10280 681 PRK10280, PRK10280, dipeptidyl carboxypeptidase II 7e-11
>gnl|CDD|188995 cd06456, M3A_DCP, Peptidase family M3 dipeptidyl carboxypeptidase (DCP) Back     alignment and domain information 
 Score =  233 bits (598), Expect = 2e-71
 Identities = 106/346 (30%), Positives = 146/346 (42%), Gaps = 127/346 (36%)

Query: 90  ELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATAL---------------------- 127
           EL +LS  FS+NVLDAT  +   VTD+ ++ GLP +AL                      
Sbjct: 139 ELAELSTKFSQNVLDATNAWALLVTDEADLAGLPESALAAAAEAAKERGGKGGWLFTLDN 198

Query: 128 ---------------------AYVT-CSFSGDLDNTSIIDQILKLRLEKAKLL------- 158
                                AYVT  S  G+ DN  II++IL LR EKAKLL       
Sbjct: 199 PSYQPVLTYADNRELREKLYRAYVTRASNGGEFDNRPIIEEILALRAEKAKLLGYPNYAE 258

Query: 159 -------------------------------DIEDLRSFCKGQGALEPREVNHWDINFWS 187
                                          ++ +L++F K +G  +  E+  WD  ++S
Sbjct: 259 YSLADKMAKTPEAVLAFLEDLAEKAKPQAKKELAELQAFAKEEGGDD--ELQPWDWAYYS 316

Query: 188 ERLCESKYDINE-----------------------------------VWNDDVRFYRVKD 212
           E+L + KYD++E                                   VW+ DVR Y V D
Sbjct: 317 EKLRKEKYDLDEEELRPYFPLDRVLEGLFALANRLYGITFKERTDLPVWHPDVRVYEVFD 376

Query: 213 SSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGD 272
             G  +  FY D Y+ P  K+G A +    SQSR         +LPV + VCN T P G 
Sbjct: 377 KDGKHLGLFYLDLYARPG-KRGGAWMNSYRSQSR----LLDGGQLPVAYNVCNFTKPAGG 431

Query: 273 KPSLMTFSE--TVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVEL 316
           KP+L+T  E  T+FHEFGHAL  +L+  D   ++G+  + WD VEL
Sbjct: 432 KPALLTHDEVTTLFHEFGHALHGLLSDVDYPSLSGTNVV-WDFVEL 476

Peptidase family M3 dipeptidyl carboxypeptidase (DCP; Dcp II; peptidyl dipeptidase; EC 3.4.15.5). This metal-binding M3A family also includes oligopeptidase A (OpdA; EC 3.4.24.70) enzyme. DCP cleaves dipeptides off the C-termini of various peptides and proteins, the smallest substrate being N-blocked tripeptides and unblocked tetrapeptides. DCP from E. coli is inhibited by the anti-hypertensive drug captopril, an inhibitor of the mammalian angiotensin converting enzyme (ACE, also called peptidyl dipeptidase A). Oligopeptidase A (OpdA) may play a specific role in the degradation of signal peptides after they are released from precursor forms of secreted proteins. It can also cleave N-acetyl-L-Ala. Length = 654
>gnl|CDD|189012 cd09605, M3A, Peptidase M3A family includes Thimet oligopeptidase, dipeptidyl carboxypeptidase and mitochondrial intermediate peptidase Back     alignment and domain information
>gnl|CDD|223416 COG0339, Dcp, Zn-dependent oligopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|182832 PRK10911, PRK10911, oligopeptidase A; Provisional Back     alignment and domain information
>gnl|CDD|188994 cd06455, M3A_TOP, Peptidase M3 Thimet oligopeptidase (TOP) also includes neurolysin Back     alignment and domain information
>gnl|CDD|216500 pfam01432, Peptidase_M3, Peptidase family M3 Back     alignment and domain information
>gnl|CDD|188996 cd06457, M3A_MIP, Peptidase M3 mitochondrial intermediate peptidase (MIP) Back     alignment and domain information
>gnl|CDD|182353 PRK10280, PRK10280, dipeptidyl carboxypeptidase II; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 351
COG0339 683 Dcp Zn-dependent oligopeptidases [Amino acid trans 100.0
PRK10280 681 dipeptidyl carboxypeptidase II; Provisional 100.0
KOG2089 718 consensus Metalloendopeptidase family - saccharoly 100.0
PRK10911 680 oligopeptidase A; Provisional 100.0
KOG2090 704 consensus Metalloendopeptidase family - mitochondr 100.0
cd06457 458 M3A_MIP Peptidase M3 mitochondrial intermediate pe 100.0
cd06456 422 M3A_DCP_Oligopeptidase_A Peptidase family M3 dipep 100.0
cd06455 472 M3A_TOP Peptidase M3 Thimet oligopeptidase (TOP; P 100.0
PF01432 458 Peptidase_M3: Peptidase family M3 This Prosite mot 100.0
cd06258 365 Peptidase_M3_like The peptidase M3-like family, al 99.93
TIGR02289 549 M3_not_pepF oligoendopeptidase, M3 family. This fa 99.87
cd06459 427 M3B_Oligoendopeptidase_F Peptidase family M3B Olig 99.87
TIGR00181 591 pepF oligoendopeptidase F. This family represents 99.83
TIGR02290 587 M3_fam_3 oligoendopeptidase, pepF/M3 family. The M 99.73
COG1164 598 Oligoendopeptidase F [Amino acid transport and met 99.03
cd06461 477 M2_ACE Peptidase family M2 Angiotensin converting 97.67
COG0339 683 Dcp Zn-dependent oligopeptidases [Amino acid trans 95.73
cd06460 396 M32_Taq Peptidase family M32 is a subclass of meta 93.55
COG2856213 Predicted Zn peptidase [Amino acid transport and m 89.3
PF06114122 DUF955: Domain of unknown function (DUF955); Inter 85.6
PF00413154 Peptidase_M10: Matrixin This Prosite motif covers 84.98
PF14247220 DUF4344: Domain of unknown function (DUF4344) 84.94
PRK10280 681 dipeptidyl carboxypeptidase II; Provisional 80.44
>COG0339 Dcp Zn-dependent oligopeptidases [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=6.3e-78  Score=616.05  Aligned_cols=330  Identities=34%  Similarity=0.534  Sum_probs=300.5

Q ss_pred             HHHHhcccccccccccccccceEE--EeCCCHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHHHhh-------------
Q 018718            9 VVFLLLPPSAVQSRFKSRNTFLCF--SICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGHLK-------------   73 (351)
Q Consensus         9 ~~~~~~p~~~~en~~~~~~~~l~f--~~~~~~~~r~as~~a~~~~~~~~~~~~~~l~~v~~~~~~l~-------------   73 (351)
                      ..|+|.|+-...+.....+.++.+  .+++|+++|+|..+..- .+.++.....+...+|..+.++.             
T Consensus        56 ~~n~v~~Le~~~~~L~rv~~~~~~l~~v~~~~elr~a~e~~~p-klse~~~~l~~~~~Lf~~~~al~~~~e~~~ld~e~~  134 (683)
T COG0339          56 WENTVEPLERAGDRLGRVWSVVSHLNSVHNSPELREAYEEILP-KLSEFSNDLGQNPGLFARYKALWQSPESAGLDPEQK  134 (683)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCHHHHHHHHHhhH-HHHHHHHHhhcCHHHHHHHHHHhcCcccccCCHHHH
Confidence            468999999999999999999987  99999999999999999 99999999999999999999882             


Q ss_pred             -------------ccCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhhccccccccChhhhcCCCHHHH------------
Q 018718           74 -------------SVKNNPDLRSAYEEVR-ELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATAL------------  127 (351)
Q Consensus        74 -------------~~~~~~~~R~~~~ei~-~ls~L~~~F~~Nl~~~~~~~~~v~~~~~eL~GlP~~~l------------  127 (351)
                                   |+..+++.|+++.+|+ |||+|+++|+||+++++.+|.+++.++++|+|||+..+            
T Consensus       135 r~~e~~~rdF~~sGa~L~~~~k~r~~~I~~ela~L~~~Fs~nvL~at~~~~~~~~~~~~LaGlp~~~l~aa~~~A~~kg~  214 (683)
T COG0339         135 RVVENALRDFVLSGAKLPPEKKARLAEINTELAELGAQFSNNVLDATKAWALIVTDEAELAGLPESLLAAAAAAAEAKGL  214 (683)
T ss_pred             HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccceeecCcHHHhcCCCHHHHHHHHHHHHhcCC
Confidence                         6667778899999998 99999999999999999999999999999999999986            


Q ss_pred             ------------------------------HHHHhhCC-CCCCcHHHHHHHHHHHHHHHhhh------------------
Q 018718          128 ------------------------------AYVTCSFS-GDLDNTSIIDQILKLRLEKAKLL------------------  158 (351)
Q Consensus       128 ------------------------------a~~~ra~~-~~~~N~~il~eil~LR~e~A~LL------------------  158 (351)
                                                    |+.+|+++ +..+|.+|+.++++||+|+|+||                  
T Consensus       215 ~~~~itl~~p~~~p~l~~~~~r~lRe~~y~A~~~ra~~~~~~~n~~ii~~~L~LR~E~A~LLGf~~yA~~~L~~kMA~~p  294 (683)
T COG0339         215 EGYLITLDIPSYLPVLTYADNRALREKLYRAYVTRASEGGPNDNRAIIEEILKLRAELAKLLGFSNYAEYSLADKMAKTP  294 (683)
T ss_pred             CCeEEeecccchhHHHHhcccHHHHHHHHHHHhhhccccCCcccHHHHHHHHHHHHHHHHHcCcccHHHHhHHHHhhcCH
Confidence                                          67778876 45679999999999999999999                  


Q ss_pred             --------------------hHHHHHHHHHhc-CCCCCCccccCCHHHHHHHhhhhhcCCCC------------------
Q 018718          159 --------------------DIEDLRSFCKGQ-GALEPREVNHWDINFWSERLCESKYDINE------------------  199 (351)
Q Consensus       159 --------------------El~~L~~~k~~~-~~~~~~~l~pWD~~Yy~~~~~~~~~~vd~------------------  199 (351)
                                          |+++|+++++++ +  +..+++|||++||++|+|+++|++|+                  
T Consensus       295 ~~Vl~fL~~l~~ka~~~a~~e~a~L~~~~~~~~~--~~~~l~~WD~~yyaeK~r~~~y~~de~elrpYF~l~~Vl~GlF~  372 (683)
T COG0339         295 EAVLNFLNDLAEKARPQAEKELAELQAFAAEEEG--GLPELQPWDWAYYAEKQRQEKYAFDEEELRPYFPLNKVLEGLFE  372 (683)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhcc--CCcccchhhHHHHHHHHHhhhcCCCHHHhhhcCChhHHHHHHHH
Confidence                                899999999874 4  57789999999999999999999998                  


Q ss_pred             -----------------ccCCceeEEEEEcCCCCCccccccCccCCCCCCCCCceeeecccccccccCCCCccccceEEE
Q 018718          200 -----------------VWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHM  262 (351)
Q Consensus       200 -----------------vWh~dV~~~~V~d~~g~~lG~~YlDl~~R~gKk~~ga~~~~~~~~~~~~~~dG~~~~~P~~~l  262 (351)
                                       +||||||+|+|+|.+|..+|.||+|+|+|+| |+|||||..+++|...  .+|+ .|+||+++
T Consensus       373 ~~~rLfGI~~~e~~~~~vwHpDVr~~~v~d~~g~~~g~fY~DlyaR~~-KrgGAWM~~~~~~~~~--~~~~-~q~PV~yl  448 (683)
T COG0339         373 VAKRLFGITFVERKDIPVWHPDVRVFEVFDENGELIGLFYLDLYARDG-KRGGAWMDDFVSQRRL--DDGG-GQKPVIYL  448 (683)
T ss_pred             HHHHHcCeEEEECCCCCccCCCceEEEEEcCCCCEEEEEEeecccCCC-CccchHHHHhhhcccc--cCCC-cccceEEE
Confidence                             9999999999999999999999999999999 7999999999987653  3454 58999999


Q ss_pred             eeccCCCCCCCCCCCCCc--hhhHhhhhHHHhhhhhcCCccccccCCCccceeeeechhhchhh----hhhhc-----cc
Q 018718          263 VCNQTPPVGDKPSLMTFS--ETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWKI----GVTRT-----QV  331 (351)
Q Consensus       263 v~Nf~~p~~~~P~LL~~~--~TLFHEfGHalH~lls~~~y~~~sGt~~v~~DfvE~PSq~~e~~----~~l~~-----~~  331 (351)
                      ||||++|.+|+|+||+|+  +||||||||+||+||++++|+.+|||+ |||||||+||||||+|    ++|..     +|
T Consensus       449 vCNF~~p~~gkPaLls~dEV~TLFHEfGHgLH~mlt~v~~~~vsGt~-v~wDfVElPSQ~mE~w~~~p~vL~~~a~Hy~T  527 (683)
T COG0339         449 VCNFTKPVGGKPALLSHDEVTTLFHEFGHGLHHLLTRVKYPGVSGTN-VPWDFVELPSQFMENWCWEPEVLAKYARHYQT  527 (683)
T ss_pred             eccCCCCCCCCCceeeHHHHHHHHHHhhhHHHHHhhcCCccccCCCC-CCcchhhccHHHHHHhhcCHHHHHHHHHhhcc
Confidence            999999999999999999  999999999999999999999999997 9999999999999654    56644     89


Q ss_pred             CCCCcccc--chhhccc
Q 018718          332 IPTIPEDG--YFCSFRH  346 (351)
Q Consensus       332 ~~~~~~d~--~~~~~~~  346 (351)
                      |+|||.++  .+.+.|+
T Consensus       528 Ge~lP~~ll~k~laakn  544 (683)
T COG0339         528 GEPLPKELLDKMLAAKN  544 (683)
T ss_pred             CCcCHHHHHHHHHHHHh
Confidence            99999999  3444443

>PRK10280 dipeptidyl carboxypeptidase II; Provisional Back     alignment and domain information
>KOG2089 consensus Metalloendopeptidase family - saccharolysin & thimet oligopeptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK10911 oligopeptidase A; Provisional Back     alignment and domain information
>KOG2090 consensus Metalloendopeptidase family - mitochondrial intermediate peptidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06457 M3A_MIP Peptidase M3 mitochondrial intermediate peptidase (MIP; EC 3 Back     alignment and domain information
>cd06456 M3A_DCP_Oligopeptidase_A Peptidase family M3 dipeptidyl carboxypeptidase (DCP; Dcp II; peptidyl dipeptidase; EC 3 Back     alignment and domain information
>cd06455 M3A_TOP Peptidase M3 Thimet oligopeptidase (TOP; PZ-peptidase; endo-oligopeptidase A; endopeptidase 24 Back     alignment and domain information
>PF01432 Peptidase_M3: Peptidase family M3 This Prosite motif covers only the active site Back     alignment and domain information
>cd06258 Peptidase_M3_like The peptidase M3-like family, also called neurolysin-like family, is part of the "zincins" metallopeptidases, and includes M3, M2 and M32 families of metallopeptidases Back     alignment and domain information
>TIGR02289 M3_not_pepF oligoendopeptidase, M3 family Back     alignment and domain information
>cd06459 M3B_Oligoendopeptidase_F Peptidase family M3B Oligopeptidase F (PepF; Pz-peptidase B; EC 3 Back     alignment and domain information
>TIGR00181 pepF oligoendopeptidase F Back     alignment and domain information
>TIGR02290 M3_fam_3 oligoendopeptidase, pepF/M3 family Back     alignment and domain information
>COG1164 Oligoendopeptidase F [Amino acid transport and metabolism] Back     alignment and domain information
>cd06461 M2_ACE Peptidase family M2 Angiotensin converting enzyme (ACE, EC 3 Back     alignment and domain information
>COG0339 Dcp Zn-dependent oligopeptidases [Amino acid transport and metabolism] Back     alignment and domain information
>cd06460 M32_Taq Peptidase family M32 is a subclass of metallocarboxypeptidases which are distributed mainly in bacteria and archaea, and contain a HEXXH motif that coordinates a divalent cation such as Zn2+ or Co2+, so far only observed in the active site of neutral metallopeptidases but not in carboxypeptidases Back     alignment and domain information
>COG2856 Predicted Zn peptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PF06114 DUF955: Domain of unknown function (DUF955); InterPro: IPR010359 This is a family of bacterial and viral proteins with undetermined function Back     alignment and domain information
>PF00413 Peptidase_M10: Matrixin This Prosite motif covers only the active site Back     alignment and domain information
>PF14247 DUF4344: Domain of unknown function (DUF4344) Back     alignment and domain information
>PRK10280 dipeptidyl carboxypeptidase II; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
2o36_A 674 Crystal Structure Of Engineered Thimet Oligopeptida 6e-12
1s4b_P 674 Crystal Structure Of Human Thimet Oligopeptidase Le 6e-12
1i1i_P 681 Neurolysin (Endopeptidase 24.16) Crystal Structure 5e-11
2o3e_A 678 Crystal Structure Of Engineered Neurolysin With Thi 5e-11
1y79_1 680 Crystal Structure Of The E.Coli Dipeptidyl Carboxyp 6e-10
>pdb|2O36|A Chain A, Crystal Structure Of Engineered Thimet Oligopeptidase With Neurolysin Specificity In Neurotensin Cleavage Site Length = 674 Back     alignment and structure 
Iteration: 1

 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 43/210 (20%)
Query: 144 IDQILKLRLEKAKLLDIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINE---- 199
           + Q LK   E+ + + +E  R+ C+ +G      +  WD+ ++  ++ E++Y +++    
Sbjct: 283 LAQKLKPLGEQERAVILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLK 342
Query: 200 -------------------------------VWNDDVRFYRVKDS-SGSPIAYFYFDPYS 227
                                           W++DVR Y  +D+ SG  +  FY D Y 
Sbjct: 343 EYFPVQVVTHGLLGIYQELLGLAFHHEEGASAWHEDVRLYTARDAASGEVVGKFYLDLY- 401
Query: 228 CPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSE--TVFH 285
            P E K     C    Q   L  DG + ++ +  MV N T P  D PSL+   E  T FH
Sbjct: 402 -PREGKYGHAAC-FGLQPGCLRQDG-SRQIAIAAMVANFTKPTADAPSLLQHDEVRTYFH 458
Query: 286 EFGHALQRMLTKQDEGLVAGSRGIEWDAVE 315
           EFGH + ++ ++ +  + +G+  +E D VE
Sbjct: 459 EFGHVMHQLCSQAEFAMFSGTH-VETDFVE 487
>pdb|1S4B|P Chain P, Crystal Structure Of Human Thimet Oligopeptidase Length = 674 Back     alignment and structure
>pdb|1I1I|P Chain P, Neurolysin (Endopeptidase 24.16) Crystal Structure Length = 681 Back     alignment and structure
>pdb|2O3E|A Chain A, Crystal Structure Of Engineered Neurolysin With Thimet Oligopeptidase Specificity For Neurotensin Cleavage Site Length = 678 Back     alignment and structure
>pdb|1Y79|1 Chain 1, Crystal Structure Of The E.Coli Dipeptidyl Carboxypeptidase Dcp In Complex With A Peptidic Inhibitor Length = 680 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query351
1y79_1 680 Peptidyl-dipeptidase DCP; hinge bending, carboxype 4e-67
2o3e_A 678 Neurolysin; thermolysin-like domain, substrate-bin 1e-63
2o36_A 674 ThiMet oligopeptidase; thermolysin-like domain, su 8e-61
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1y79_1 Peptidyl-dipeptidase DCP; hinge bending, carboxypeptidase, neurolysin, ACE, hydrolase; HET: TRP; 2.00A {Escherichia coli} Length = 680 Back     alignment and structure
 Score =  222 bits (569), Expect = 4e-67
 Identities = 72/388 (18%), Positives = 130/388 (33%), Gaps = 139/388 (35%)

Query: 54  GLSLEDNPLL----QDFEIIGHLKSVKNNPDLRSAYEEV-RELGKLSIDFSENVLDATKR 108
           GL  E   L+    Q F + G     K     ++  + +  E   L+  F++ +L A K 
Sbjct: 126 GLDSESIRLVEVIHQRFVLAG----AKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKS 181

Query: 109 FETFVTDKKEIQGLPATAL----------------------------------------- 127
               V D  ++ G+    +                                         
Sbjct: 182 GGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWLIPLLNTTQQPALAEMRDRATREKL 241

Query: 128 --AYVT-CSFSGDLDNTSIIDQILKLRLEKAKLL-------------------------- 158
             A  T    +   D  +II +++++R ++A LL                          
Sbjct: 242 FIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLLGFPHYAAWKIADQMAKTPEAALNFMR 301

Query: 159 ------------DIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINE------- 199
                       ++  +++    Q          WD  F++E++   K+D++E       
Sbjct: 302 EIVPAARQRASDELASIQAVIDKQQGGF--SAQPWDWAFYAEQVRREKFDLDEAQLKPYF 359

Query: 200 -----------------------------VWNDDVRFYRVKDSSGSPIAYFYFDPYSCPS 230
                                        V++ DVR + + D +G  +A FY D ++  S
Sbjct: 360 ELNTVLNEGVFWTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDS 419

Query: 231 EKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSE--TVFHEFG 288
            K G A +     QS    L+      PV++ VCN   P   +P+L+ + +  T+FHEFG
Sbjct: 420 -KSGGAWMGNFVEQST---LNK---THPVIYNVCNYQKPAAGEPALLLWDDVITLFHEFG 472

Query: 289 HALQRMLTKQDEGLVAGSRGIEWDAVEL 316
           H L  +  +Q    ++G+     D VE 
Sbjct: 473 HTLHGLFARQRYATLSGT-NTPRDFVEF 499
>2o3e_A Neurolysin; thermolysin-like domain, substrate-binding channel, hydrolase; 2.20A {Rattus norvegicus} PDB: 1i1i_P Length = 678 Back     alignment and structure
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P Length = 674 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query351
1y79_1 680 Peptidyl-dipeptidase DCP; hinge bending, carboxype 100.0
2o3e_A 678 Neurolysin; thermolysin-like domain, substrate-bin 100.0
2o36_A 674 ThiMet oligopeptidase; thermolysin-like domain, su 100.0
3sks_A 567 Putative oligoendopeptidase F; structural genomics 99.97
3ahn_A 564 Oligopeptidase, PZ peptidase A; hydrolase, hydrola 99.95
3ce2_A 618 Putative peptidase; structural genomics, unknown f 99.94
2qr4_A 587 Peptidase M3B, oligoendopeptidase F; structural ge 99.94
1r42_A 615 Angiotensin I converting enzyme 2; zinc metallopep 98.81
1uze_A 589 Angiotensin converting enzyme; metalloprotease, in 98.62
3nxq_A 629 Angiotensin-converting enzyme; dicarboxy zinc meta 97.18
2x96_A 598 Angiotensin converting enzyme; hydrolase, ACE inhi 96.36
>1y79_1 Peptidyl-dipeptidase DCP; hinge bending, carboxypeptidase, neurolysin, ACE, hydrolase; HET: TRP; 2.00A {Escherichia coli} Back     alignment and structure
Probab=100.00  E-value=7.8e-60  Score=497.57  Aligned_cols=329  Identities=22%  Similarity=0.328  Sum_probs=276.2

Q ss_pred             HHHHhcccccccccccccccceEE--EeCCCHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHHHhh-------------
Q 018718            9 VVFLLLPPSAVQSRFKSRNTFLCF--SICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGHLK-------------   73 (351)
Q Consensus         9 ~~~~~~p~~~~en~~~~~~~~l~f--~~~~~~~~r~as~~a~~~~~~~~~~~~~~l~~v~~~~~~l~-------------   73 (351)
                      .-|+|.|+...++.+.....++.+  .+++++++|+++.++.. .+.++.....+...+|..+.++.             
T Consensus        54 ~~n~i~~le~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~l~~~~~~l~~~~~l~~~~~~~~~~~~~~~L~~e~~  132 (680)
T 1y79_1           54 FNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSA-ELAELANDIYLNGELFARVDAVWQRRESLGLDSESI  132 (680)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHH-HHHHHHHHHHSCHHHHHHHHHHHHTTTTSCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHHHHHhChhhccCCHHHH
Confidence            468899999999998888877776  89999999999999988 99999999999899998887663             


Q ss_pred             -------------ccCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhhccccccccChhhhcCCCHHHHHHH---------
Q 018718           74 -------------SVKNNPDLRSAYEEVR-ELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATALAYV---------  130 (351)
Q Consensus        74 -------------~~~~~~~~R~~~~ei~-~ls~L~~~F~~Nl~~~~~~~~~v~~~~~eL~GlP~~~la~~---------  130 (351)
                                   |+..+++.|+++.+|+ +|++|+++|++|+++++++|..+++++++|+|||+++++..         
T Consensus       133 r~~~~~l~~f~~~G~~L~~~~~~~~~~l~~~l~~L~~~f~~n~~~~~~~~~~~~~~~~~L~Glp~~~~~~~~~~a~~~g~  212 (680)
T 1y79_1          133 RLVEVIHQRFVLAGAKLAQADKAKLKVLNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGL  212 (680)
T ss_dssp             HHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEESCGGGGTTSCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcceEEecCHHHhcCCCHHHHHHHHHHHHhcCC
Confidence                         3333444566667666 99999999999999999999988889999999999987322         


Q ss_pred             ----------------------------------HhhCCCC-CCcHHHHHHHHHHHHHHHhhh-----------------
Q 018718          131 ----------------------------------TCSFSGD-LDNTSIIDQILKLRLEKAKLL-----------------  158 (351)
Q Consensus       131 ----------------------------------~ra~~~~-~~N~~il~eil~LR~e~A~LL-----------------  158 (351)
                                                        +|+.... .+|.+++.+|+++|+++|+||                 
T Consensus       213 ~G~~~~~l~~~~~~~~l~~~~dr~~Rk~~~~a~~~~~~~~~~~~n~~~l~~i~~lR~~~A~llGy~s~a~~~l~~~ma~t  292 (680)
T 1y79_1          213 DNKWLIPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQATLLGFPHYAAWKIADQMAKT  292 (680)
T ss_dssp             TTCEEECCCSSSSCGGGGTCCCHHHHHHHHHHHHTTTCSSSTTCCHHHHHHHHHHHHHHHHHTTCSSHHHHHHTTSTTCS
T ss_pred             CCcEEEecchhhHHHHHhhCcCHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhhhcCC
Confidence                                              2222222 689999999999999999999                 


Q ss_pred             ---------------------hHHHHHHHHHhcCCCCCCccccCCHHHHHHHhhhhhcCCCC------------------
Q 018718          159 ---------------------DIEDLRSFCKGQGALEPREVNHWDINFWSERLCESKYDINE------------------  199 (351)
Q Consensus       159 ---------------------El~~L~~~k~~~~~~~~~~l~pWD~~Yy~~~~~~~~~~vd~------------------  199 (351)
                                           |+++|++++++..  +.++++|||+.||.+++++.+|++|+                  
T Consensus       293 ~e~V~~fL~~l~~~~~p~a~~e~~~l~~~~~~~~--g~~~l~~wD~~yy~~~~~~~~~~~de~~~~~yF~l~~vl~~gl~  370 (680)
T 1y79_1          293 PEAALNFMREIVPAARQRASDELASIQAVIDKQQ--GGFSAQPWDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVF  370 (680)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCSCCCHHHHHHHHHHHHHHHHSCCGGGTGGGCBHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCCCCHHHHHHHHHHHHHHhcCCCHHHhcccCCHHHHHHHHHH
Confidence                                 6667777776653  34679999999999999888777654                  


Q ss_pred             ------------------ccCCceeEEEEEcCCCCCccccccCccCCCCCCCCCceeeecccccccccCCCCccccceEE
Q 018718          200 ------------------VWNDDVRFYRVKDSSGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVH  261 (351)
Q Consensus       200 ------------------vWh~dV~~~~V~d~~g~~lG~~YlDl~~R~gKk~~ga~~~~~~~~~~~~~~dG~~~~~P~~~  261 (351)
                                        +|||||++|+|+|.+|+++|++|+|+|+|+| |++||||+.+++++.   .+|   +.|+++
T Consensus       371 ~~~~~lfG~~~~~~~~~~~whpdV~~~~v~~~~~~~~g~~ylD~~~R~g-Kr~Ga~~~~~~~~~~---~~~---~~Pv~~  443 (680)
T 1y79_1          371 WTANQLFGIKFVERFDIPVYHPDVRVWEIFDHNGVGLALFYGDFFARDS-KSGGAWMGNFVEQST---LNK---THPVIY  443 (680)
T ss_dssp             HHHHHHHCCEEEEESSSCCSSTTCEEEEEECTTSCEEEEEEEEEECCTT-SCSSCEEEEEECCBT---TTT---BCCEEE
T ss_pred             HHHHHhcCCeEEECCCCccCCCcceEEEEEeCCCCEEeeEEEeecCCCC-CCCCeeecccccccc---CCC---cCCeEE
Confidence                              8999999999999889999999999999999 688999988776543   134   579999


Q ss_pred             EeeccCCCCCCCCCCCCCc--hhhHhhhhHHHhhhhhcCCccccccCCCccceeeeechhhchh----hhhhhc-----c
Q 018718          262 MVCNQTPPVGDKPSLMTFS--ETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWK----IGVTRT-----Q  330 (351)
Q Consensus       262 lv~Nf~~p~~~~P~LL~~~--~TLFHEfGHalH~lls~~~y~~~sGt~~v~~DfvE~PSq~~e~----~~~l~~-----~  330 (351)
                      ++|||++|++++|+||+|+  .|||||||||+|++++++.|+.++|| +++|||||+|||+||+    +.+|..     .
T Consensus       444 i~~Nf~~p~~~~p~LLt~~dV~TLfHE~GHalH~~ls~~~~~~~sgt-~~~~d~vE~pS~~~E~~~~~p~~L~~~~~h~~  522 (680)
T 1y79_1          444 NVCNYQKPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGT-NTPRDFVEFPSQINEHWATHPQVFARYARHYQ  522 (680)
T ss_dssp             EEEEECCCCTTSCCBCCHHHHHHHHHHHHHHHHHHTCCCSSGGGSTT-CSCHHHHHHHHHHHHHGGGSHHHHHHHCBCTT
T ss_pred             EeccCCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHhcCCcccccCc-cccchhhhccchhhhhHhcCHHHHHHHHhhcc
Confidence            9999999999999999999  99999999999999999999999998 4799999999999965    346543     6


Q ss_pred             cCCCCcccc--chhhccccc
Q 018718          331 VIPTIPEDG--YFCSFRHKF  348 (351)
Q Consensus       331 ~~~~~~~d~--~~~~~~~~~  348 (351)
                      |++|||+++  .+...|..+
T Consensus       523 t~e~~p~~l~~~l~~~~~~~  542 (680)
T 1y79_1          523 SGAAMPDELQQKMRNASLFN  542 (680)
T ss_dssp             TCCBCCHHHHHHHHHTTTTT
T ss_pred             CCCcCCHHHHHHHHHHHhhc
Confidence            899999987  444444433
>2o3e_A Neurolysin; thermolysin-like domain, substrate-binding channel, hydrolase; 2.20A {Rattus norvegicus} PDB: 1i1i_P Back     alignment and structure
>2o36_A ThiMet oligopeptidase; thermolysin-like domain, substrate-binding channel, hydrolase; 1.95A {Homo sapiens} PDB: 1s4b_P Back     alignment and structure
>3sks_A Putative oligoendopeptidase F; structural genomics, center for structural genomics of infec diseases, csgid, protease, hydrolase; 2.05A {Bacillus anthracis} Back     alignment and structure
>3ahn_A Oligopeptidase, PZ peptidase A; hydrolase, hydrolase-hydrolase inhibitor complex; HET: 3A1; 1.80A {Geobacillus SP} PDB: 3ahm_A* 3aho_A* 2h1n_A 2h1j_A Back     alignment and structure
>3ce2_A Putative peptidase; structural genomics, unknown function, P protein structure initiative; 2.60A {Chlamydophila abortus} Back     alignment and structure
>2qr4_A Peptidase M3B, oligoendopeptidase F; structural genomics, PSI-2, protein ST initiative; 2.50A {Enterococcus faecium} Back     alignment and structure
>1r42_A Angiotensin I converting enzyme 2; zinc metallopeptidase domain, Na open conformation, chloride ION binding site; HET: NAG; 2.20A {Homo sapiens} SCOP: d.92.1.5 PDB: 1r4l_A* 3sci_A 3scj_A 2ajf_A* 3kbh_A* 3d0g_A* 3d0h_A* 3d0i_A* 3sck_A 3scl_A Back     alignment and structure
>1uze_A Angiotensin converting enzyme; metalloprotease, inhibitor, enalaprilat, zinc dependant peptidase, anti-hypertensive drug; HET: EAL; 1.82A {Homo sapiens} SCOP: d.92.1.5 PDB: 1o8a_A* 1o86_A* 1uzf_A* 2oc2_A* 2ydm_A* 2iux_A* 2iul_A* 2xy9_A* 3bkk_A* 3bkl_A* 3l3n_A* Back     alignment and structure
>3nxq_A Angiotensin-converting enzyme; dicarboxy zinc metallopeptidase, hydrolase, hydrolase-hydrol inhibitor complex; HET: RX4 NAG FUC BMA P6G PG4; 1.99A {Homo sapiens} PDB: 2xyd_A* 2c6n_A* 2c6f_A* Back     alignment and structure
>2x96_A Angiotensin converting enzyme; hydrolase, ACE inhibitor, zinc metallopeptidase; HET: RX3 EPE NAG BMA MAN; 1.85A {Drosophila melanogaster} PDB: 2x8z_A* 2x90_A* 2x91_A* 2x8y_A* 2x97_A* 2xhm_A* 3zqz_A* 2x94_A* 2x92_A* 2x93_A* 2x95_A* 1j36_A* 1j37_A* 1j38_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 351
d1s4bp_ 654 d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thi 1e-20
d1i1ip_ 665 d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thi 3e-16
>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]} Length = 654 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Neurolysin-like
domain: Neurolysin (endopeptidase 24.16, thimet oligopeptidase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.0 bits (225), Expect = 1e-20
 Identities = 62/378 (16%), Positives = 122/378 (32%), Gaps = 118/378 (31%)

Query: 53  DGLSLEDNPLLQDFEIIGHLKSVKNNPDLRSAYEEVR-ELGKLSIDFSENVLDATKRFET 111
           D L  E    L+    +G    +    + +   + ++ +L  L IDF++N+ + T     
Sbjct: 109 DSLRPEAARYLERLIKLGRRNGLHLPRETQENIKRIKKKLSLLCIDFNKNLNEDTTFLPF 168

Query: 112 FVTD------------KKEIQGLPATALAYVTC--------------------SFSGDLD 139
            + +            +K   G     L Y                       +     +
Sbjct: 169 TLQELGGLPEDFLNSLEKMEDGKLKVTLKYPHYFPLLKKCHVPETRRKVEEAFNSRCKEE 228

Query: 140 NTSIIDQILKLRLEKAKLL--------------------------------------DIE 161
           N++I+ +++ LR +K++LL                                      +  
Sbjct: 229 NSAILKELVTLRAQKSRLLGFHTHADYVLEMNMAKTSQTVATFLDELAQKLKPLGEQERA 288

Query: 162 DLRSF----CKGQGALEPREVNHWDINFWSER---------------------------- 189
            +       C+ +G      +  WD+ ++  +                            
Sbjct: 289 VILELKRAECERRGLPFDGRIRAWDMRYYMNQVEETRYCVDQNLLKEYFPVQVVTHGLLG 348

Query: 190 LCESKYDIN-------EVWNDDVRFYRVKDS-SGSPIAYFYFDPYSCPSEKKGSARICEV 241
           + +    +          W++DVR Y  +D+ SG  +  FY D Y    +          
Sbjct: 349 IYQELLGLAFHHEEGASAWHEDVRLYTARDAASGEVVGKFYLDLYPREGKYGH----AAC 404

Query: 242 FSQSRVLTLDGATTRLPVVHMVCNQTPPVGDKPSLMTFSE--TVFHEFGHALQRMLTKQD 299
           F           + ++ +  MV N T P  D PSL+   E  T FHEFGH + ++ ++ +
Sbjct: 405 FGLQPGCLRQDGSRQIAIAAMVANFTKPTADAPSLLQHDEVETYFHEFGHVMHQLCSQAE 464

Query: 300 EGLVAGSRGIEWDAVELS 317
             + +G+  +E D VE  
Sbjct: 465 FAMFSGTH-VERDFVEAP 481
>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 665 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query351
d1i1ip_ 665 Neurolysin (endopeptidase 24.16, thimet oligopepti 100.0
d1s4bp_ 654 Neurolysin (endopeptidase 24.16, thimet oligopepti 100.0
d2ajfa1 597 Angiotensin converting enzyme 2, ACE2 {Human (Homo 99.69
d1uzea_ 579 Angiotensin converting enzyme, ACE {Human (Homo sa 99.37
d1j36a_ 598 Angiotensin converting enzyme, ACE {Fruit fly (Dro 99.25
d1j7na2223 Anthrax toxin lethal factor, N- and C-terminal dom 91.74
d1hfca_157 Fibroblast collagenase (MMP-1) {Human (Homo sapien 84.61
d1qiba_161 Gelatinase A {Human (Homo sapiens) [TaxId: 9606]} 82.24
d1rm8a_169 Matrix metalloproteinase-16 (MMP-16) {Human (Homo 82.08
d1hy7a_168 Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibro 81.39
d1y93a1158 Macrophage elastase (MMP-12) {Human (Homo sapiens) 81.33
d2ovxa1159 Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 80.08
d1xuca1169 Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxI 80.01
>d1i1ip_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Neurolysin-like
domain: Neurolysin (endopeptidase 24.16, thimet oligopeptidase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.2e-70  Score=571.72  Aligned_cols=332  Identities=26%  Similarity=0.397  Sum_probs=286.1

Q ss_pred             HHHhcccccccccccccccceEE--EeCCCHHHHHHHHHHHHHHHhhhhhcccchhhHHHHHHHh---------------
Q 018718           10 VFLLLPPSAVQSRFKSRNTFLCF--SICPSPASAATSMAATGAVVDGLSLEDNPLLQDFEIIGHL---------------   72 (351)
Q Consensus        10 ~~~~~p~~~~en~~~~~~~~l~f--~~~~~~~~r~as~~a~~~~~~~~~~~~~~l~~v~~~~~~l---------------   72 (351)
                      -|||.|+.+.++.+.....++.|  +||||+++|+|+.+|.. .+.++..+..+..++|..+..+               
T Consensus        50 en~i~~ld~~~~~l~~~~~~~~~l~~v~~d~~~r~a~~~~~~-~l~~~~~~i~~n~~Ly~~l~~l~~~~~~~~L~~E~~r  128 (665)
T d1i1ip_          50 ENCLQVLADIEVTYIVERTMLDFPQHVSSDREVRAASTEADK-KLSRFDIEMSMREDVFQRIVHLQETCDLEKIKPEARR  128 (665)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHSHHHHCSCHHHHHHHHHHHH-HHHHHHHHHHTCHHHHHHHHHHHHHSCTTSSCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH-HHHHHHHHhhcCHHHHHHHHHHHcCcccccCCHHHHH
Confidence            47889999999999988888887  99999999999999999 9999999999999999999887               


Q ss_pred             -----------hccCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHhhccccccccChhhhcCCCHHHHHHH----------
Q 018718           73 -----------KSVKNNPDLRSAYEEVR-ELGKLSIDFSENVLDATKRFETFVTDKKEIQGLPATALAYV----------  130 (351)
Q Consensus        73 -----------~~~~~~~~~R~~~~ei~-~ls~L~~~F~~Nl~~~~~~~~~v~~~~~eL~GlP~~~la~~----------  130 (351)
                                 +|+..+++.|+++++|+ +|+.|+.+|++|+.++++.   +++++++|+|||+++++..          
T Consensus       129 lle~~l~df~~sG~~L~~~~r~r~~~l~~els~l~~~F~~nl~~~~~~---~~~~~~~L~Glp~~~~~~~~~~~~~~~~i  205 (665)
T d1i1ip_         129 YLEKSIKMGKRNGLHLSEHIRNEIKSMKKRMSELCIDFNKNLNEDDTS---LVFSKAELGALPDDFIDSLEKTDEDKYKV  205 (665)
T ss_dssp             HHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE---EEECTGGGTTCCHHHHHTSCBCSSSCEEE
T ss_pred             HHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhccc---ccccHhhhcCCCHHHHHHHHHhcCCCcee
Confidence                       25666667888888887 9999999999999999864   7889999999999987110          


Q ss_pred             -----------Hh------------h--CCCCCCcHHHHHHHHHHHHHHHhhh---------------------------
Q 018718          131 -----------TC------------S--FSGDLDNTSIIDQILKLRLEKAKLL---------------------------  158 (351)
Q Consensus       131 -----------~r------------a--~~~~~~N~~il~eil~LR~e~A~LL---------------------------  158 (351)
                                 +.            +  .++..+|.++|++|++||+|+|+||                           
T Consensus       206 tl~~p~~~~~l~~~~~~~lR~~~~~a~~~r~~~~N~~~l~~il~lR~e~A~LLGf~s~A~~~L~~kMA~spe~V~~FL~~  285 (665)
T d1i1ip_         206 TLKYPHYFPVMKKCCVPETRRKMEMAFHTRCKQENTAILQQLLPLRAQVAKLLGYNTHADFVLELNTAKSTSRVAAFLDD  285 (665)
T ss_dssp             ESSHHHHHHHHHHCCCHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHTCSSHHHHHHTTSTTCSHHHHHHHHHH
T ss_pred             eccccccchhhhhcCcHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhhhcCcHHHHHHHHHH
Confidence                       00            1  1234699999999999999999999                           


Q ss_pred             -----------hHHHHHHHHHhc----CCCCCCccccCCHHHHHHHhhhhhcCCCC------------------------
Q 018718          159 -----------DIEDLRSFCKGQ----GALEPREVNHWDINFWSERLCESKYDINE------------------------  199 (351)
Q Consensus       159 -----------El~~L~~~k~~~----~~~~~~~l~pWD~~Yy~~~~~~~~~~vd~------------------------  199 (351)
                                 |+++|+++|++.    +.++++.|+|||+.||++++|+++|++|+                        
T Consensus       286 L~~~~~p~a~~E~~~L~~~~~~~~~~~~~~~~~~l~pWD~~Yy~~k~r~~~~~~d~~~l~~YFpl~~vl~gl~~l~~~Lf  365 (665)
T d1i1ip_         286 LSQKLKPLGEAEREFILSLKKKECEERGFEYDGKINAWDLHYYMTQTEELKYSVDQESLKEYFPIEVVTEGLLSIYQELL  365 (665)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSSCCHHHHHHHHHHHHHHHSCCCHHHHGGGCBHHHHHHHHHHHHHHHH
T ss_pred             HHHHhhhhhHHHHHHHHHHHHHhhhhcCCCcccccCcccHHHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHHh
Confidence                       788888887653    33456789999999999999999999987                        


Q ss_pred             -----------ccCCceeEEEEEcC-CCCCccccccCccCCCCCCCCCceeeecccccccccCCCCccccceEEEeeccC
Q 018718          200 -----------VWNDDVRFYRVKDS-SGSPIAYFYFDPYSCPSEKKGSARICEVFSQSRVLTLDGATTRLPVVHMVCNQT  267 (351)
Q Consensus       200 -----------vWh~dV~~~~V~d~-~g~~lG~~YlDl~~R~gKk~~ga~~~~~~~~~~~~~~dG~~~~~P~~~lv~Nf~  267 (351)
                                 +|||||++|+|+|. +|++||+||+|+|+|+|| ++|+||..++++  ....+|+ +|.|++++||||+
T Consensus       366 gi~~~~~~~~~~wh~dV~~~~v~d~~~~~~lG~~YlDl~~R~~K-~~~a~~~~~~~~--~~~~~~~-~q~P~~~lv~Nf~  441 (665)
T d1i1ip_         366 GLSFEQVPDAHVWNKSVSLYTVKDKATGEVLGQFYLDLYPREGK-YNHAACFGLQPG--CLLPDGS-RMMSVAALVVNFS  441 (665)
T ss_dssp             TEEEEECTTCCCSSTTCEEEEEEETTTCCEEEEEEEECSCCTTS-CCSCEEEEEECC--CBCTTSC-BCCEEEEEECCCC
T ss_pred             heeeeecccCCCccccceEEEEEeccccceeeeEEEecccCccc-cCCCeEeeeccC--ccccccc-ccceeEEEeeecc
Confidence                       89999999999986 588999999999999995 555566555442  2235676 7999999999999


Q ss_pred             CCCCCCCCCCCCc--hhhHhhhhHHHhhhhhcCCccccccCCCccceeeeechhhchhh----hhhhc-----ccCCCCc
Q 018718          268 PPVGDKPSLMTFS--ETVFHEFGHALQRMLTKQDEGLVAGSRGIEWDAVELSTNNSWKI----GVTRT-----QVIPTIP  336 (351)
Q Consensus       268 ~p~~~~P~LL~~~--~TLFHEfGHalH~lls~~~y~~~sGt~~v~~DfvE~PSq~~e~~----~~l~~-----~~~~~~~  336 (351)
                      +|++++|+||+|+  +||||||||+||+||++++|+++|||+ |+|||||+||||||+|    .+|+.     .|++|||
T Consensus       442 ~p~~~~p~lls~~ev~TLFHEfGHalH~lls~~~y~~lsGt~-v~~DfvE~pSql~E~~~~~~~vL~~~a~h~~tge~lp  520 (665)
T d1i1ip_         442 QPVAGRPSLLRHDEVRTYFHEFGHVMHQICAQTDFARFSGTN-VETDFVEVPSQMLENWVWDVDSLRKLSKHYKDGHPIT  520 (665)
T ss_dssp             CCCTTSCCBCCHHHHHHHHHHHHHHHHHHHCCCSSGGGSTTC-SCTTTTHHHHHHHHGGGGCHHHHHHHCCCTTTCCCCC
T ss_pred             CCCCCCCCccchhhHhhhHHHHHHHHHHhhcccccccccccc-chhhhhhhhHHHHHHhcCCHHHHHhhhccccCCccCC
Confidence            9999999999999  999999999999999999999999986 7899999999999654    67754     7999999


Q ss_pred             ccc--chhhccccccc
Q 018718          337 EDG--YFCSFRHKFAS  350 (351)
Q Consensus       337 ~d~--~~~~~~~~~~~  350 (351)
                      +|+  .+++.|+.++|
T Consensus       521 ~~l~~~~~~~~~~~~~  536 (665)
T d1i1ip_         521 DELLEKLVASRLVNTG  536 (665)
T ss_dssp             HHHHHHHHHTTTTTHH
T ss_pred             HHHHHHHHHHhhHHHH
Confidence            999  67888887765
>d1s4bp_ d.92.1.5 (P:) Neurolysin (endopeptidase 24.16, thimet oligopeptidase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ajfa1 d.92.1.5 (A:19-615) Angiotensin converting enzyme 2, ACE2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uzea_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1j36a_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1j7na2 d.92.1.14 (A:551-773) Anthrax toxin lethal factor, N- and C-terminal domains {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1hfca_ d.92.1.11 (A:) Fibroblast collagenase (MMP-1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qiba_ d.92.1.11 (A:) Gelatinase A {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1rm8a_ d.92.1.11 (A:) Matrix metalloproteinase-16 (MMP-16) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1hy7a_ d.92.1.11 (A:) Stromelysin-1 (MMP-3) {Human (Homo sapiens), fibroblast [TaxId: 9606]} Back     information, alignment and structure
>d1y93a1 d.92.1.11 (A:106-263) Macrophage elastase (MMP-12) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ovxa1 d.92.1.11 (A:110-443) Gelatinase B (MMP-9) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xuca1 d.92.1.11 (A:104-272) Collagenase-3 (MMP-13) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure