Citrus Sinensis ID: 018792

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

MASFLGTVRPSPSSVSCFAPCRRQISVYTSQISLPTSGFFPFKRILQACLQSNLANGDNGVQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML

cccccccccccccccccccccEEEEEEcccccccccccccccHHHHHHHHHccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEcccccccEEEEEcccHHHHHHHHHccccccccccEEEEccccccccccHHHHHHHHHcccccccEEEcHHHHHHHHHccccccccccccccccEEcEEEEEEccccEEEEEEEEEEEEEEcccccEEEEEEEccEEEEcccccccccHHHHcccccEEEEEcccccccccccccHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHHccccEEEccccEEEEEEc

cccEEEEEccccccccccccccEEEccccccEEcccccccccHHHHHHHHHHcccccccccccccccEEEEEEEcccccccccccccccccccccccccccccccccccccEEEEEEEccccccEEEEEEccHHHHHHHHHHccHcccccEcEEEEEcccHcHHcccHcHHHHHHHccccccEEccHHHHHHHHHHcccEEEcccccccccccEEEEEEcccccEEEccEEEEEEEccccccccEEEEEEccEEEEccHccccHHHHHHHccccEEEEEcccccccccccccHHHHHHHHHHHcccEEEEEcccccccHHHHHHHccccccccccccEEccccEEEEEEc

masflgtvrpspssvscfapcrrqisvytsqislptsgffpFKRILQACLQSnlangdngvqlpaqqsEIVFmgtgtsegiprvscltnpskkcpvctkavepgnknrrlNTSILirypgpsgrrnilidagkffyhsalrwfpaygirtiDAVIITHshadaigglddlrdwtnnvQRHIPIYVAMRDFEVMKKTHYYLvdtsgiipgaavselqfniideepftvqdlkitplpvwhgagyrslgfrfgnicyisdvseipeetypflqdCEILIMdalrpdrsssthfglprALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETegldvqlsydglrvpvml

masflgtvrpspssvscFAPCRRQISVYTSQISLPTSGFFPFKRILQACLQSNLANGDNGVQLPAQQSEIVFMGTGTSEGIPRVscltnpskkcpvctkavepgnknrrlntsilirypgpsgrrNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSssthfglpraleevrkiqPKRTLFIGMMHLMDHEKVNEELLKLMETegldvqlsydglrvpvml

**************VSCFAPCRRQISVYTSQISLPTSGFFPFKRILQACLQSNLANGDNGVQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALR********FGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLR*****

********RPSPSSVSCFAPCRRQISVYTSQISL***********************************IVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML

***************SCFAPCRRQISVYTSQISLPTSGFFPFKRILQACLQSNLANGDNGVQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML

MASFLGTVRPSPSSVSCFAPCRRQISVYTSQISLPTSGFFPFKRILQACLQSNL******V*LPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		350	2.2.26 [Sep-21-2011]
O74545		301	Putative hydrolase C777.0	yes	no	0.774	0.900	0.384	8e-49
Q7MUY1		492	Octanoyltransferase OS=Po	yes	no	0.717	0.510	0.291	3e-23
P16692		252	Protein PhnP OS=Escherich	N/A	no	0.645	0.896	0.257	4e-07
Q95Q18		295	Beta-lactamase-like prote	yes	no	0.277	0.328	0.342	4e-05

>sp\|O74545\|YCV6_SCHPO Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1	Back alignment and function desciption

 Score =  194 bits (493), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/294 (38%), Positives = 170/294 (57%), Gaps = 23/294 (7%)

Query: 68  SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEP-GNKNRRLNTSILIRYPGPSGRR- 125
           S+++FMGTG S GIP V CLT     C  C  ++ P G KN R NTS+L++    SG R 
Sbjct: 6   SKLLFMGTGCSSGIPNVCCLTLEKPTCRTCLASLTPEGRKNNRFNTSVLLQVDDGSGDRP 65

Query: 126 -NILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWT-NNVQRHIPI 183
            NILID GK FY SAL+ F  + IR +DAVI+TH HADAI G+DDLR+WT   +Q  + I
Sbjct: 66  KNILIDCGKHFYVSALKHFVEHKIRYLDAVILTHDHADAINGMDDLREWTLGFLQPSVKI 125

Query: 184 YVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKI--TPLPVWHG 240
           Y+  R ++V++++  Y+V+      G +V    F++   ++PF + D+ I  TPLPV HG
Sbjct: 126 YLTERTYKVIERSFPYMVNAKNATGGGSVPTFDFHVFSPDKPFKLDDIDISVTPLPVHHG 185

Query: 241 A---------GYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHF 291
                      Y  +GFR G++ YISD + +P  T   ++   ++++DAL+ +   S HF
Sbjct: 186 VYFIEGKESQTYFCMGFRVGDMSYISDCNYVPPTTKKLMEGSNVVVVDALKHEPYPS-HF 244

Query: 292 GLPRALEEVRKIQ--PKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDG 343
              +A E +  ++  P R L+ G  H ++H +  +EL  L     +  + +YDG
Sbjct: 245 SFKQAEEFIASLEHVPSRVLYTGFSHKVEHNETVKELSVLK----VPTEPAYDG 294

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp\|Q7MUY1\|LIPB_PORGI Octanoyltransferase OS=Porphyromonas gingivalis (strain ATCC BAA-308 / W83) GN=lipB PE=3 SV=1	Back alignment and function description

>sp\|P16692\|PHNP_ECOLI Protein PhnP OS=Escherichia coli (strain K12) GN=phnP PE=1 SV=1	Back alignment and function description

>sp\|Q95Q18\|LACB2_CAEEL Beta-lactamase-like protein 2 homolog OS=Caenorhabditis elegans GN=Y53F4B.39 PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		350
225442301		350	PREDICTED: putative hydrolase C777.06c [	1.0	1.0	0.777	1e-160
449458165		357	PREDICTED: putative hydrolase C777.06c-l	0.997	0.977	0.756	1e-158
297829934		359	metallo-beta-lactamase family protein [A	0.977	0.952	0.775	1e-156
42564134		361	metallo-beta-lactamase family protein [A	0.98	0.950	0.765	1e-154
255572929		346	catalytic, putative [Ricinus communis] g	0.845	0.855	0.871	1e-152
224135033		314	predicted protein [Populus trichocarpa]	0.862	0.961	0.808	1e-147
9294602		309	hydrolase-like protein [Arabidopsis thal	0.86	0.974	0.804	1e-143
363814330		342	uncharacterized protein LOC100786919 [Gl	0.965	0.988	0.732	1e-143
357513653		341	Hydrolase-like protein [Medicago truncat	0.96	0.985	0.732	1e-142
356526011		342	PREDICTED: putative hydrolase C777.06c-l	0.965	0.988	0.724	1e-142

>gi\|225442301\|ref\|XP_002280465.1\| PREDICTED: putative hydrolase C777.06c [Vitis vinifera] gi\|297743093\|emb\|CBI35960.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 272/350 (77%), Positives = 304/350 (86%)

Query: 1   MASFLGTVRPSPSSVSCFAPCRRQISVYTSQISLPTSGFFPFKRILQACLQSNLANGDNG 60
           M  FLG++R +PSS++CF+P +R+I      IS+   G  PF+R+ +ACL+S+ A G+  
Sbjct: 1   MVPFLGSIRANPSSITCFSPYKRRIFFDKPAISVSRYGSSPFQRLFRACLESDSAKGNTR 60

Query: 61  VQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPG 120
           VQLP +QSEI+F+GTGTSEGIPRVSCLTNP K C VC+KA +P +KNRRLNTSILIRYP 
Sbjct: 61  VQLPVEQSEIIFLGTGTSEGIPRVSCLTNPLKTCLVCSKAADPSSKNRRLNTSILIRYPS 120

Query: 121 PSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRH 180
            SG   ILID GKFFYHSALRWFP +GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQ H
Sbjct: 121 SSGGCTILIDVGKFFYHSALRWFPTFGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPH 180

Query: 181 IPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHG 240
           IPIYVA RDFEVMKKTHYYLVDTS IIPGAAVSELQFNII EEPF V DLK+ PLPVWHG
Sbjct: 181 IPIYVAPRDFEVMKKTHYYLVDTSVIIPGAAVSELQFNIIHEEPFIVHDLKVIPLPVWHG 240

Query: 241 AGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEV 300
            GYRSLGFRFGNICYISDVSEIPEETYP L++CEIL++DALRPDRSS+THFGLPRAL+EV
Sbjct: 241 PGYRSLGFRFGNICYISDVSEIPEETYPLLKNCEILVLDALRPDRSSATHFGLPRALDEV 300

Query: 301 RKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML 350
           RKIQPKRTLF GMMHLMDHEKV+E+L KL +TEGLDVQLSYDGLRVPV L
Sbjct: 301 RKIQPKRTLFTGMMHLMDHEKVSEDLEKLKKTEGLDVQLSYDGLRVPVTL 350

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449458165\|ref\|XP_004146818.1\| PREDICTED: putative hydrolase C777.06c-like [Cucumis sativus] gi\|449476657\|ref\|XP_004154798.1\| PREDICTED: putative hydrolase C777.06c-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297829934\|ref\|XP_002882849.1\| metallo-beta-lactamase family protein [Arabidopsis lyrata subsp. lyrata] gi\|297328689\|gb\|EFH59108.1\| metallo-beta-lactamase family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi|42564134|ref|NP_187996.2| metallo-beta-lactamase family protein [Arabidopsis thaliana] gi|62318851|dbj|BAD93913.1| hydrolase like protein [Arabidopsis thaliana] gi|63003856|gb|AAY25457.1| At3g13800 [Arabidopsis thaliana] gi|90093300|gb|ABD85163.1| At3g13800 [Arabidopsis thaliana] gi|110739543|dbj|BAF01680.1| hydrolase like protein [Arabidopsis thaliana] gi|332641895|gb|AEE75416.1| metallo-beta-lactamase family protein [Arabidopsis thaliana]

Back alignment and taxonomy information

>gi\|255572929\|ref\|XP_002527395.1\| catalytic, putative [Ricinus communis] gi\|223533205\|gb\|EEF34961.1\| catalytic, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|224135033\|ref\|XP_002327550.1\| predicted protein [Populus trichocarpa] gi\|222836104\|gb\|EEE74525.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|9294602\|dbj\|BAB02903.1\| hydrolase-like protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|363814330\|ref\|NP_001242806.1\| uncharacterized protein LOC100786919 [Glycine max] gi\|255644437\|gb\|ACU22723.1\| unknown [Glycine max]	Back alignment and taxonomy information

>gi\|357513653\|ref\|XP_003627115.1\| Hydrolase-like protein [Medicago truncatula] gi\|355521137\|gb\|AET01591.1\| Hydrolase-like protein [Medicago truncatula]	Back alignment and taxonomy information

>gi\|356526011\|ref\|XP_003531613.1\| PREDICTED: putative hydrolase C777.06c-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		350
TAIR\|locus:2087974		361	AT3G13800 "AT3G13800" [Arabido	0.985	0.955	0.760	6.1e-142
POMBASE\|SPCC777.06c		301	SPCC777.06c "hydrolase (predic	0.774	0.900	0.390	3.7e-48
TAIR\|locus:2140695		303	AT4G03610 [Arabidopsis thalian	0.774	0.894	0.365	3.7e-32
TAIR\|locus:2009827		324	AT1G30300 "AT1G30300" [Arabido	0.614	0.663	0.372	6e-32
TIGR_CMR\|GSU_2465		251	GSU_2465 "metallo-beta-lactama	0.654	0.912	0.324	1.4e-23
UNIPROTKB\|Q5LPV6		266	SPO2743 "Uncharacterized prote	0.682	0.898	0.301	9.2e-20
TIGR_CMR\|SPO_2743		266	SPO_2743 "conserved hypothetic	0.682	0.898	0.301	9.2e-20
TIGR_CMR\|APH_1062		263	APH_1062 "metallo-beta-lactama	0.677	0.901	0.289	2.6e-19
TIGR_CMR\|ECH_0985		263	ECH_0985 "metallo-beta-lactama	0.734	0.977	0.256	7.3e-18
TIGR_CMR\|NSE_0580		264	NSE_0580 "metallo-beta-lactama	0.734	0.973	0.241	1.1e-10

TAIR\|locus:2087974 AT3G13800 "AT3G13800" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1388 (493.7 bits), Expect = 6.1e-142, P = 6.1e-142
 Identities = 267/351 (76%), Positives = 295/351 (84%)

Query:     5 LGTVRPSPSSVSCFAPCRRQ----ISVYTSQISLPTSGFFPFKRILQACLQSNLANGDNG 60
             LGT+RPS  S+SCF   R      +  + S IS  T+   P  +ILQACLQSN ANGD  
Sbjct:    12 LGTLRPSHRSLSCFDSLRHHQTSFLRCHQSLISRNTTRS-PLNKILQACLQSNSANGDAL 70

Query:    61 VQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPG 120
             V    + SEIVFMGTGTSEGIPRVSCLTNP K C VCTKA EPGN+NRRLNTSIL+RY  
Sbjct:    71 VSSSDESSEIVFMGTGTSEGIPRVSCLTNPLKTCSVCTKATEPGNRNRRLNTSILVRYIR 130

Query:   121 PSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRH 180
             PSG  NILID GKFFYHSALRWFP +G+RT+DAV+ITHSHADAIGGLDDLRDWTNNVQ H
Sbjct:   131 PSGTSNILIDCGKFFYHSALRWFPTFGLRTLDAVVITHSHADAIGGLDDLRDWTNNVQPH 190

Query:   181 IPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEE-PFTVQDLKITPLPVWH 239
             IPIY A+RD EVMKKTHYYLVDTS IIPGAAVSEL+F +I E+ PF V DLKITPLPVWH
Sbjct:   191 IPIYTAIRDLEVMKKTHYYLVDTSVIIPGAAVSELEFKVIHEDQPFVVNDLKITPLPVWH 250

Query:   240 GAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEE 299
             G+ YRSLGFRFGN+CYISDVS+IPEETYP L+DC++LIMDALRPDRSS+THFGLPRALEE
Sbjct:   251 GSNYRSLGFRFGNVCYISDVSDIPEETYPLLKDCDLLIMDALRPDRSSATHFGLPRALEE 310

Query:   300 VRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML 350
             VRKI+PKRTLF GMMHLMDHEKV+EEL KL  TEGLDVQLSYDGLRVP+ +
Sbjct:   311 VRKIKPKRTLFTGMMHLMDHEKVSEELEKLRNTEGLDVQLSYDGLRVPISI 361

GO:0003824 "catalytic activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=ISS

GO:0016787 "hydrolase activity" evidence=IEA

POMBASE\|SPCC777.06c SPCC777.06c "hydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

TAIR\|locus:2140695 AT4G03610 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2009827 AT1G30300 "AT1G30300" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TIGR_CMR\|GSU_2465 GSU_2465 "metallo-beta-lactamase family protein" [Geobacter sulfurreducens PCA (taxid:243231)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5LPV6 SPO2743 "Uncharacterized protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]	Back alignment and assigned GO terms

TIGR_CMR\|SPO_2743 SPO_2743 "conserved hypothetical protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]	Back alignment and assigned GO terms

TIGR_CMR\|APH_1062 APH_1062 "metallo-beta-lactamase family protein" [Anaplasma phagocytophilum HZ (taxid:212042)]	Back alignment and assigned GO terms

TIGR_CMR\|ECH_0985 ECH_0985 "metallo-beta-lactamase family protein" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)]	Back alignment and assigned GO terms

TIGR_CMR\|NSE_0580 NSE_0580 "metallo-beta-lactamase family protein" [Neorickettsia sennetsu str. Miyayama (taxid:222891)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		350
PRK02113		252	PRK02113, PRK02113, putative hydrolase; Provisiona	3e-49
COG1235		269	COG1235, PhnP, Metal-dependent hydrolases of the b	3e-29
PRK11244		250	PRK11244, phnP, carbon-phosphorus lyase complex ac	3e-20
pfam12706		197	pfam12706, Lactamase_B_2, Beta-lactamase superfami	4e-20
smart00849		177	smart00849, Lactamase_B, Metallo-beta-lactamase su	3e-18
TIGR03307		238	TIGR03307, PhnP, phosphonate metabolism protein Ph	6e-15
pfam00753		148	pfam00753, Lactamase_B, Metallo-beta-lactamase sup	1e-14
COG0491		252	COG0491, GloB, Zn-dependent hydrolases, including	6e-09
COG1234		292	COG1234, ElaC, Metal-dependent hydrolases of the b	2e-07
COG2333		293	COG2333, ComEC, Predicted hydrolase (metallo-beta-	4e-06
COG1236		427	COG1236, YSH1, Predicted exonuclease of the beta-l	2e-04
COG2220		258	COG2220, COG2220, Predicted Zn-dependent hydrolase	8e-04
pfam07718		279	pfam07718, Coatamer_beta_C, Coatamer beta C-termin	0.001
PRK00055		270	PRK00055, PRK00055, ribonuclease Z; Reviewed	0.003
TIGR02651		299	TIGR02651, RNase_Z, ribonuclease Z	0.003

>gnl\|CDD\|179371 PRK02113, PRK02113, putative hydrolase; Provisional	Back alignment and domain information

 Score =  165 bits (420), Expect = 3e-49
 Identities = 101/278 (36%), Positives = 137/278 (49%), Gaps = 31/278 (11%)

Query: 70  IVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILI 129
           I  +G+GTS G+P + C       CPVCT   +P  ++ RL TS L+   G      ILI
Sbjct: 3   IRILGSGTSTGVPEIGC------TCPVCTSK-DP--RDNRLRTSALVETEG----ARILI 49

Query: 130 DAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRD 189
           D G  F    LR         IDAV+ITH H D +GGLDDLR +       +PIY     
Sbjct: 50  DCGPDFREQMLR----LPFGKIDAVLITHEHYDHVGGLDDLRPFCR--FGEVPIYAEQYV 103

Query: 190 FEVMK-KTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGF 248
            E ++ +  Y  V+ S   PG     L+  I  + PF V   ++TPL V HG     LG+
Sbjct: 104 AERLRSRMPYCFVEHS--YPGVPNIPLR-EIEPDRPFLVNHTEVTPLRVMHGK-LPILGY 159

Query: 249 RFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRT 308
           R G + YI+D+  +PEE Y  LQ  ++L+M+ALR      TH  L  ALE +++I  K T
Sbjct: 160 RIGKMAYITDMLTMPEEEYEQLQGIDVLVMNALRI-APHPTHQSLEEALENIKRIGAKET 218

Query: 309 LFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRV 346
             I M H +      E+ L         V  +YDGL +
Sbjct: 219 YLIHMSHHIGLHADVEKELP------PHVHFAYDGLEI 250

Length = 252

>gnl\|CDD\|224156 COG1235, PhnP, Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|183052 PRK11244, phnP, carbon-phosphorus lyase complex accessory protein; Provisional	Back alignment and domain information

>gnl\|CDD\|221727 pfam12706, Lactamase_B_2, Beta-lactamase superfamily domain	Back alignment and domain information

>gnl\|CDD\|214854 smart00849, Lactamase_B, Metallo-beta-lactamase superfamily	Back alignment and domain information

>gnl\|CDD\|163212 TIGR03307, PhnP, phosphonate metabolism protein PhnP	Back alignment and domain information

>gnl\|CDD\|216099 pfam00753, Lactamase_B, Metallo-beta-lactamase superfamily	Back alignment and domain information

>gnl\|CDD\|223565 COG0491, GloB, Zn-dependent hydrolases, including glyoxylases [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|224155 COG1234, ElaC, Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|225212 COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|224157 COG1236, YSH1, Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|225130 COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	Back alignment and domain information

>gnl\|CDD\|219533 pfam07718, Coatamer_beta_C, Coatamer beta C-terminal region	Back alignment and domain information

>gnl\|CDD\|234602 PRK00055, PRK00055, ribonuclease Z; Reviewed	Back alignment and domain information

>gnl\|CDD\|233963 TIGR02651, RNase_Z, ribonuclease Z	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		350
PRK02113		252	putative hydrolase; Provisional	100.0
PRK05184		302	pyrroloquinoline quinone biosynthesis protein PqqB	100.0
TIGR02108		302	PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B.	100.0
PRK11244		250	phnP carbon-phosphorus lyase complex accessory pro	100.0
TIGR02649		303	true_RNase_BN ribonuclease BN. Members of this pro	100.0
TIGR02651		299	RNase_Z ribonuclease Z. Processing of the 3-prime	100.0
TIGR03307		238	PhnP phosphonate metabolism protein PhnP. This fam	100.0
COG1234		292	ElaC Metal-dependent hydrolases of the beta-lactam	100.0
PRK00055		270	ribonuclease Z; Reviewed	100.0
KOG2121		746	consensus Predicted metal-dependent hydrolase (bet	99.97
PRK02126		334	ribonuclease Z; Provisional	99.95
PRK00685		228	metal-dependent hydrolase; Provisional	99.92
PRK04286		298	hypothetical protein; Provisional	99.91
TIGR02650		277	RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me	99.9
COG1235		269	PhnP Metal-dependent hydrolases of the beta-lactam	99.9
PF12706		194	Lactamase_B_2: Beta-lactamase superfamily domain;	99.89
TIGR00649		422	MG423 conserved hypothetical protein. Contains an	99.82
PRK11709		355	putative L-ascorbate 6-phosphate lactonase; Provis	99.81
TIGR03675		630	arCOG00543 arCOG00543 universal archaeal KH-domain	99.8
smart00849		183	Lactamase_B Metallo-beta-lactamase superfamily. Ap	99.72
COG1782		637	Predicted metal-dependent RNase, consists of a met	99.7
COG1236		427	YSH1 Predicted exonuclease of the beta-lactamase f	99.63
COG0595		555	mRNA degradation ribonucleases J1/J2 (metallo-beta	99.59
PRK11921		394	metallo-beta-lactamase/flavodoxin domain-containin	99.55
TIGR03413		248	GSH_gloB hydroxyacylglutathione hydrolase. Members	99.54
TIGR00361		662	ComEC_Rec2 DNA internalization-related competence	99.54
PRK11539		755	ComEC family competence protein; Provisional	99.52
PF02112		335	PDEase_II: cAMP phosphodiesterases class-II; Inter	99.52
COG2220		258	Predicted Zn-dependent hydrolases of the beta-lact	99.51
KOG1136		501	consensus Predicted cleavage and polyadenylation s	99.5
COG2333		293	ComEC Predicted hydrolase (metallo-beta-lactamase	99.49
PF13483		163	Lactamase_B_3: Beta-lactamase superfamily domain;	99.48
PRK05452		479	anaerobic nitric oxide reductase flavorubredoxin;	99.48
PF00753		194	Lactamase_B: Metallo-beta-lactamase superfamily; I	99.47
PRK10241		251	hydroxyacylglutathione hydrolase; Provisional	99.46
PLN02398		329	hydroxyacylglutathione hydrolase	99.45
COG1237		259	Metal-dependent hydrolases of the beta-lactamase s	99.44
PLN02469		258	hydroxyacylglutathione hydrolase	99.4
COG0426		388	FpaA Uncharacterized flavoproteins [Energy product	99.36
PLN02962		251	hydroxyacylglutathione hydrolase	99.35
COG0491		252	GloB Zn-dependent hydrolases, including glyoxylase	99.33
KOG1137		668	consensus mRNA cleavage and polyadenylation factor	99.27
COG2248		304	Predicted hydrolase (metallo-beta-lactamase superf	99.15
KOG0813		265	consensus Glyoxylase [General function prediction	99.09
COG5212		356	PDE1 Low-affinity cAMP phosphodiesterase [Signal t	98.98
KOG1361		481	consensus Predicted hydrolase involved in interstr	98.67
KOG1135		764	consensus mRNA cleavage and polyadenylation factor	98.58
KOG3798		343	consensus Predicted Zn-dependent hydrolase (beta-l	98.58
KOG0814		237	consensus Glyoxylase [General function prediction	98.58
PF14597		199	Lactamase_B_5: Metallo-beta-lactamase superfamily;	98.4
COG2015		655	Alkyl sulfatase and related hydrolases [Secondary	98.03
PF13691		63	Lactamase_B_4: tRNase Z endonuclease	97.57
KOG4736		302	consensus Uncharacterized conserved protein [Funct	95.92
KOG3592		934	consensus Microtubule-associated proteins [Cytoske	89.76
PF07521		43	RMMBL: RNA-metabolising metallo-beta-lactamase; In	88.62
KOG1137		668	consensus mRNA cleavage and polyadenylation factor	83.65
TIGR00649		422	MG423 conserved hypothetical protein. Contains an	80.82

>PRK02113 putative hydrolase; Provisional	Back alignment and domain information

Probab=100.00  E-value=2.4e-42  Score=312.86  Aligned_cols=251  Identities=38%  Similarity=0.652  Sum_probs=202.6

Q ss_pred             eEEEEEeccCCCCcCccCccCCCCCCCCCCccccCCCCCCccccceEEEEecCCCCCceEEEecCcchHHHHHhhCCcCC
Q 018792           68 SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYG  147 (350)
Q Consensus        68 ~~i~~LGtG~~~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l~~~~  147 (350)
                      |+++|||||++.|+|.++|      .|++|..++   +++.|+++|++|+.    ++..||||||++...++.+    .+
T Consensus         1 m~~~~lGtg~~~g~P~~~c------~c~~C~~~~---~~~~R~~~s~li~~----~~~~iLiD~G~g~~~~l~~----~~   63 (252)
T PRK02113          1 MKIRILGSGTSTGVPEIGC------TCPVCTSKD---PRDNRLRTSALVET----EGARILIDCGPDFREQMLR----LP   63 (252)
T ss_pred             CEEEEEEeCCCCCeecCCC------CCccCCCCC---CCCcceeeEEEEEE----CCeEEEEECCchHHHHHHh----cC
Confidence            7999999999999999999      999999974   56889999999995    6789999999998777655    25


Q ss_pred             CCCccEEEecCCcccccCChhHHHHhhccCCccccEEechhhHHHHHHhccccccccCCCCCCcccceeeEEec-CcceE
Q 018792          148 IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFT  226 (350)
Q Consensus       148 ~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~  226 (350)
                      +.+||+|||||.|.||++|++.+..+.  ...+++||+++.+.+.+.....+.+... .+++  ....+++.++ ++.++
T Consensus        64 ~~~id~I~lTH~H~DH~~gl~~l~~~~--~~~~~~i~~~~~~~~~l~~~~~~~~~~~-~~~~--~~~~~~~~~~~g~~~~  138 (252)
T PRK02113         64 FGKIDAVLITHEHYDHVGGLDDLRPFC--RFGEVPIYAEQYVAERLRSRMPYCFVEH-SYPG--VPNIPLREIEPDRPFL  138 (252)
T ss_pred             ccccCEEEECCCChhhhCCHHHHHHhc--cCCCceEEECHHHHHHHHhhCCeeeccC-CCCC--CcceeeEEcCCCCCEE
Confidence            679999999999999999999886542  2347899999999888876543322111 1111  1234566665 47899


Q ss_pred             eCCEEEEEEEcccCCCccEEEEEECcEEEeCCCCCCCcchhcccCCCCEEEEcccCCCCCCCCCCCHHHHHHHHHHhCCC
Q 018792          227 VQDLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPK  306 (350)
Q Consensus       227 ~~~~~v~~~~~~H~~g~~s~g~~i~~i~ysGDt~~~~~~~~~~~~~~dlLi~e~~~~~~~~~~H~~~~~~~~~~~~~~~~  306 (350)
                      +++++|+++++.|+.. +++||++++++|+||+.+.++...+.++++|+||+|++.. ....+|++++++++++++++++
T Consensus       139 ~~~~~i~~~~~~H~~~-~~~gy~i~~i~y~~Dt~~~~~~~~~~~~~~DlLi~e~~~~-~~~~~H~t~~~a~~~~~~~~~k  216 (252)
T PRK02113        139 VNHTEVTPLRVMHGKL-PILGYRIGKMAYITDMLTMPEEEYEQLQGIDVLVMNALRI-APHPTHQSLEEALENIKRIGAK  216 (252)
T ss_pred             ECCeEEEEEEecCCCc-cEEEEEeCCEEEccCCCCCCHHHHHHhcCCCEEEEhhhcC-CCCCCcCCHHHHHHHHHHhCCC
Confidence            9999999999999753 7899999999999999988777888899999999999873 4567899999999999999999


Q ss_pred             eEEEEEeecCCChhhHHHHHHHhhhhCCCcEEEcccCeEEEe
Q 018792          307 RTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV  348 (350)
Q Consensus       307 ~~vltH~~~~~~~~~~~~~l~~~~~~~~~~v~ia~DGm~i~l  348 (350)
                      +++++|+++.+..   .+   ++.+....++.+|+|||++++
T Consensus       217 ~l~l~H~s~~~~~---~~---~~~~~~~~~~~~A~Dg~~~~~  252 (252)
T PRK02113        217 ETYLIHMSHHIGL---HA---DVEKELPPHVHFAYDGLEIIF  252 (252)
T ss_pred             EEEEEcccccchh---HH---HHHHhCCCCceeccCceEEeC
Confidence            9999999987642   12   223334446899999999975

>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional	Back alignment and domain information

>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B	Back alignment and domain information

>PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional	Back alignment and domain information

>TIGR02649 true_RNase_BN ribonuclease BN	Back alignment and domain information

>TIGR02651 RNase_Z ribonuclease Z	Back alignment and domain information

>TIGR03307 PhnP phosphonate metabolism protein PhnP	Back alignment and domain information

>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only]	Back alignment and domain information

>PRK00055 ribonuclease Z; Reviewed	Back alignment and domain information

>KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>PRK02126 ribonuclease Z; Provisional	Back alignment and domain information

>PRK00685 metal-dependent hydrolase; Provisional	Back alignment and domain information

>PRK04286 hypothetical protein; Provisional	Back alignment and domain information

>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type	Back alignment and domain information

>COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only]	Back alignment and domain information

>PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A	Back alignment and domain information

>TIGR00649 MG423 conserved hypothetical protein	Back alignment and domain information

>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional	Back alignment and domain information

>TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein	Back alignment and domain information

>smart00849 Lactamase_B Metallo-beta-lactamase superfamily	Back alignment and domain information

>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only]	Back alignment and domain information

>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]	Back alignment and domain information

>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional	Back alignment and domain information

>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase	Back alignment and domain information

>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2	Back alignment and domain information

>PRK11539 ComEC family competence protein; Provisional	Back alignment and domain information

>PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3	Back alignment and domain information

>COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]	Back alignment and domain information

>KOG1136 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]	Back alignment and domain information

>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A	Back alignment and domain information

>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional	Back alignment and domain information

>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain []	Back alignment and domain information

>PRK10241 hydroxyacylglutathione hydrolase; Provisional	Back alignment and domain information

>PLN02398 hydroxyacylglutathione hydrolase	Back alignment and domain information

>COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	Back alignment and domain information

>PLN02469 hydroxyacylglutathione hydrolase	Back alignment and domain information

>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]	Back alignment and domain information

>PLN02962 hydroxyacylglutathione hydrolase	Back alignment and domain information

>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only]	Back alignment and domain information

>KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification]	Back alignment and domain information

>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>KOG0813 consensus Glyoxylase [General function prediction only]	Back alignment and domain information

>COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms]	Back alignment and domain information

>KOG1361 consensus Predicted hydrolase involved in interstrand cross-link repair [Replication, recombination and repair]	Back alignment and domain information

>KOG1135 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit) [RNA processing and modification]	Back alignment and domain information

>KOG3798 consensus Predicted Zn-dependent hydrolase (beta-lactamase superfamily) [General function prediction only]	Back alignment and domain information

>KOG0814 consensus Glyoxylase [General function prediction only]	Back alignment and domain information

>PF14597 Lactamase_B_5: Metallo-beta-lactamase superfamily; PDB: 2P97_B	Back alignment and domain information

>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>PF13691 Lactamase_B_4: tRNase Z endonuclease	Back alignment and domain information

>KOG4736 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG3592 consensus Microtubule-associated proteins [Cytoskeleton]	Back alignment and domain information

>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs	Back alignment and domain information

>KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification]	Back alignment and domain information

>TIGR00649 MG423 conserved hypothetical protein	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		350
3md7_A		293	Crystal Structure Of A Beta-Lactamase-Like Protein		1e-26
3py6_A		274	Crystal Structure Of A Beta-Lactamase-Like Protein		1e-26
3g1p_A		258	Crystals Structure Of Phnp From E.Coli K-12 Length		3e-08

>pdb|3MD7|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein Bound To Gmp From Brucella Melitensis Length = 293

Back alignment and structure

Iteration: 1

Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 90/301 (29%), Positives = 140/301 (46%), Gaps = 30/301 (9%) Query: 56 NGDNGVQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGN-KNRRLNTSI 114 G + P +G G+S G+PR++ KC +P N KNRR S+ Sbjct: 17 QGPGSMTSPRNCLRFTLLGCGSSPGVPRIN---GDWGKC-------DPKNPKNRRRRASL 66 Query: 115 LI-RYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDW 173 L+ RY ++ID G F + G+ +DA + TH HAD I G+DDLR + Sbjct: 67 LVERYDAEGNNTVVVIDTGPDFRMQMID----SGVHMLDAAVYTHPHADHIHGIDDLRTY 122 Query: 174 TNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQD---- 229 + R + +Y + T Y +T + + +I E PF+++ Sbjct: 123 VVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSMH-DIAPETPFSIEGAGGA 181 Query: 230 LKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSST 289 ++ P HG SLGFR G++ Y +DVS PE++ +++D ++LI+ AL+ R + Sbjct: 182 IRFEPFSQVHG-DIESLGFRIGSVVYCTDVSAFPEQSLQYIKDADVLIIGALQ-YRPHPS 239 Query: 290 HFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVM 349 HF L ALE + K+ PKR + M +D+E V E +E YDGLR V Sbjct: 240 HFSLGEALEWIEKLSPKRAILTHMHVPLDYETVMRETPHHVEP-------GYDGLRFEVA 292 Query: 350 L 350 + Sbjct: 293 V 293

PyMOL of 3md7

>pdb|3PY6|A Chain A, Crystal Structure Of A Beta-Lactamase-Like Protein From Brucella Melitensis Bound To Gmp Length = 274

Back alignment and structure

>pdb|3G1P|A Chain A, Crystals Structure Of Phnp From E.Coli K-12 Length = 258

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		350
3md7_A		293	Beta-lactamase-like; ssgcid, hydrolase, structural	8e-96
3g1p_A		258	Protein PHNP; C-P lyase, phosphodiesterase, phosph	5e-83
3jxp_A		321	Coenzyme PQQ synthesis protein B; alpha-beta prote	5e-38
1zkp_A		268	Hypothetical protein BA1088; zinc binding protein,	8e-20
2p4z_A		284	Metal-dependent hydrolases of the beta-lactamase s	7e-09
3aj3_A		274	MLR6805 protein, 4-pyridoxolactonase; Zn-protein,	5e-07
1k07_A		263	FEZ-1 beta-lactamase; monomer with alpha-beta/BETA	7e-07
1p9e_A		331	Methyl parathion hydrolase; Zn containing; 2.40A {	1e-06
2cbn_A		306	Ribonuclease Z; phosphodiesterase beta lactamase t	2e-06
3dha_A		254	N-acyl homoserine lactone hydrolase; zinc bimetall	2e-06
4ax1_B		303	Metallo-beta-lactamase AIM-1; hydrolase, antibioti	2e-06
3m8t_A		294	'BLR6230 protein; subclass B3 beta-lactamase, zinc	2e-06
2i7t_A		459	Cleavage and polyadenylation specificity factor 73	3e-06
3h3e_A		267	Uncharacterized protein TM1679; structural genomic	3e-06
2ycb_A		636	Beta-CAsp RNAse, cleavage and polyadenylation spec	5e-06
2i7x_A		717	Protein CFT2; polyadenylation, metallo-B-lactamase	6e-06
3iek_A		431	Ribonuclease TTHA0252; metallo beta lactamase fold	7e-06
4ad9_A		289	Lactb2, beta-lactamase-like protein 2; hydrolase,	7e-06
2xf4_A		210	Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A	8e-06
3esh_A		280	Protein similar to metal-dependent hydrolase; stru	2e-05
1a7t_A		232	Metallo-beta-lactamase; hydrolase (beta-lactamase)	3e-05
1ztc_A		221	Hypothetical protein TM0894; structural genomics,	3e-05
3adr_A		261	Putative uncharacterized protein ST1585; quorum se	4e-05
1y44_A		320	Ribonuclease Z; zinc-dependent metal hydrolase, hy	5e-05
1sml_A		269	Protein (penicillinase); metallo-beta-lactamase, a	9e-05
2xr1_A		640	Cleavage and polyadenylation specificity factor 1	2e-04
3zwf_A		368	Zinc phosphodiesterase ELAC protein 1; beta-lactam	2e-04
2az4_A		429	Hypothetical protein EF2904; structural genomics,	2e-04
3af5_A		651	Putative uncharacterized protein PH1404; archaeal	2e-04
4eyb_A		270	Beta-lactamase NDM-1; metallo beta lactamase, anti	3e-04
2zwr_A		207	Metallo-beta-lactamase superfamily protein; hydrol	3e-04
3bk2_A		562	RNAse J, metal dependent hydrolase; endoribonuclea	3e-04
3l6n_A		219	Metallo-beta-lactamase; zinc, hydolase, antibiotic	4e-04
2e7y_A		280	TRNAse Z; tRNA maturation, metallo-beta-lactaMSe,	5e-04
2r2d_A		276	AGR_PTI_140P, Zn-dependent hydrolases; lactonase,	6e-04
2yhe_A		668	SEC-alkyl sulfatase; hydrolase, inversion, metallo	7e-04
2zo4_A		317	Metallo-beta-lactamase family protein; hydrolase;	9e-04

>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A* Length = 293	Back alignment and structure

 Score =  285 bits (732), Expect = 8e-96
 Identities = 89/309 (28%), Positives = 140/309 (45%), Gaps = 31/309 (10%)

Query: 48  ACLQSNLANGDNGVQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGN-K 106
             L++    G   +  P        +G G+S G+PR++           C     P N K
Sbjct: 10  GTLEAQ-TQGPGSMTSPRNCLRFTLLGCGSSPGVPRING------DWGKCD----PKNPK 58

Query: 107 NRRLNTSILIRYPGPSGR-RNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIG 165
           NRR   S+L+      G    ++ID G  F    +      G+  +DA + TH HAD I 
Sbjct: 59  NRRRRASLLVERYDAEGNNTVVVIDTGPDFRMQMID----SGVHMLDAAVYTHPHADHIH 114

Query: 166 GLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPF 225
           G+DDLR +  +  R + +Y        +  T  Y  +T        +  +  +I  E PF
Sbjct: 115 GIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVGSSYPPILSM-HDIAPETPF 173

Query: 226 TVQ----DLKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDAL 281
           +++     ++  P    HG    SLGFR G++ Y +DVS  PE++  +++D ++LI+ AL
Sbjct: 174 SIEGAGGAIRFEPFSQVHG-DIESLGFRIGSVVYCTDVSAFPEQSLQYIKDADVLIIGAL 232

Query: 282 RPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSY 341
           +  R   +HF L  ALE + K+ PKR +   M   +D+E V  E           V+  Y
Sbjct: 233 QY-RPHPSHFSLGEALEWIEKLSPKRAILTHMHVPLDYETVMRETPH-------HVEPGY 284

Query: 342 DGLRVPVML 350
           DGLR  V +
Sbjct: 285 DGLRFEVAV 293

PyMOL of 3md7

>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A Length = 258	Back alignment and structure

>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} PDB: 1xto_A Length = 321	Back alignment and structure

>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9 Length = 268	Back alignment and structure

>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis} Length = 284	Back alignment and structure

>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A Length = 274	Back alignment and structure

>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A Length = 263	Back alignment and structure

>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5 Length = 331	Back alignment and structure

>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7 Length = 306	Back alignment and structure

>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A Length = 254	Back alignment and structure

>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B Length = 303	Back alignment and structure

>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A Length = 294	Back alignment and structure

>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A Length = 459	Back alignment and structure

>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima} Length = 267	Back alignment and structure

>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 636	Back alignment and structure

>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10 Length = 717	Back alignment and structure

>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A* Length = 431	Back alignment and structure

>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens} Length = 289	Back alignment and structure

>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica} Length = 210	Back alignment and structure

>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp} Length = 280	Back alignment and structure

>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A* Length = 232	Back alignment and structure

>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11 Length = 221	Back alignment and structure

>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii} Length = 261	Back alignment and structure

>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A* Length = 320	Back alignment and structure

>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A Length = 269	Back alignment and structure

>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei} Length = 640	Back alignment and structure

>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens} Length = 368	Back alignment and structure

>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10 Length = 429	Back alignment and structure

>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A* Length = 651	Back alignment and structure

>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A Length = 270	Back alignment and structure

>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A Length = 207	Back alignment and structure

>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A* Length = 562	Back alignment and structure

>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} Length = 219	Back alignment and structure

>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A Length = 280	Back alignment and structure

>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens} Length = 276	Back alignment and structure

>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP} Length = 668	Back alignment and structure

>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus} Length = 317	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		350
3md7_A		293	Beta-lactamase-like; ssgcid, hydrolase, structural	100.0
3jxp_A		321	Coenzyme PQQ synthesis protein B; alpha-beta prote	100.0
3g1p_A		258	Protein PHNP; C-P lyase, phosphodiesterase, phosph	100.0
2cbn_A		306	Ribonuclease Z; phosphodiesterase beta lactamase t	100.0
1y44_A		320	Ribonuclease Z; zinc-dependent metal hydrolase, hy	100.0
3zwf_A		368	Zinc phosphodiesterase ELAC protein 1; beta-lactam	100.0
1zkp_A		268	Hypothetical protein BA1088; zinc binding protein,	100.0
2e7y_A		280	TRNAse Z; tRNA maturation, metallo-beta-lactaMSe,	99.96
3rpc_A		264	Possible metal-dependent hydrolase; structural gen	99.91
2az4_A		429	Hypothetical protein EF2904; structural genomics,	99.91
2wyl_A		360	L-ascorbate-6-phosphate lactonase ULAG; hydrolase;	99.91
3bv6_A		379	Metal-dependent hydrolase; metallo protein, beta-l	99.91
3kl7_A		235	Putative metal-dependent hydrolase; structural gen	99.9
3iek_A		431	Ribonuclease TTHA0252; metallo beta lactamase fold	99.87
3bk2_A		562	RNAse J, metal dependent hydrolase; endoribonuclea	99.85
3af5_A		651	Putative uncharacterized protein PH1404; archaeal	99.85
2p4z_A		284	Metal-dependent hydrolases of the beta-lactamase s	99.84
2i7t_A		459	Cleavage and polyadenylation specificity factor 73	99.84
3zq4_A		555	Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat	99.83
2ycb_A		636	Beta-CAsp RNAse, cleavage and polyadenylation spec	99.83
1vjn_A		220	Zn-dependent hydrolase of metallo-beta-lactamase s	99.82
2xr1_A		640	Cleavage and polyadenylation specificity factor 1	99.82
2i7x_A		717	Protein CFT2; polyadenylation, metallo-B-lactamase	99.81
4b87_A		367	DNA cross-LINK repair 1A protein; dclre1A, DCLRE,	99.78
3dha_A		254	N-acyl homoserine lactone hydrolase; zinc bimetall	99.71
3adr_A		261	Putative uncharacterized protein ST1585; quorum se	99.71
2bib_A		547	CBPE, teichoic acid phosphorylcholine esterase/ ch	99.71
3aj3_A		274	MLR6805 protein, 4-pyridoxolactonase; Zn-protein,	99.69
2r2d_A		276	AGR_PTI_140P, Zn-dependent hydrolases; lactonase,	99.69
3zdk_A		336	5' exonuclease apollo; hydrolase; HET: TLA; 2.16A	99.67
3m8t_A		294	'BLR6230 protein; subclass B3 beta-lactamase, zinc	99.66
3l6n_A		219	Metallo-beta-lactamase; zinc, hydolase, antibiotic	99.65
4efz_A		298	Metallo-beta-lactamase family protein; structural	99.64
1p9e_A		331	Methyl parathion hydrolase; Zn containing; 2.40A {	99.64
2zwr_A		207	Metallo-beta-lactamase superfamily protein; hydrol	99.64
1e5d_A		402	Rubredoxin\:oxygen oxidoreductase; oxygenreductase	99.64
1ycg_A		398	Nitric oxide reductase; DIIRON site, oxidoreductas	99.63
2ohh_A		404	Type A flavoprotein FPRA; beta-lactamase like doma	99.63
1a7t_A		232	Metallo-beta-lactamase; hydrolase (beta-lactamase)	99.62
4ax1_B		303	Metallo-beta-lactamase AIM-1; hydrolase, antibioti	99.62
1k07_A		263	FEZ-1 beta-lactamase; monomer with alpha-beta/BETA	99.61
3q6v_A		233	Beta-lactamase; metalloenzyme, alpha-beta, hydrola	99.61
2xf4_A		210	Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A	99.61
3esh_A		280	Protein similar to metal-dependent hydrolase; stru	99.61
2y8b_A		265	Metallo-B-lactamase; hydrolase, cephalosporins, an	99.59
1m2x_A		223	Class B carbapenemase BLAB-1; alpha-beta/BETA-alph	99.59
2qed_A		258	Hydroxyacylglutathione hydrolase; metallo-B- super	99.56
4ad9_A		289	Lactb2, beta-lactamase-like protein 2; hydrolase,	99.55
4hl2_A		243	Beta-lactamase NDM-1; structural genomics, PSI-bio	99.55
1sml_A		269	Protein (penicillinase); metallo-beta-lactamase, a	99.55
1mqo_A		227	Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd	99.55
1ztc_A		221	Hypothetical protein TM0894; structural genomics,	99.54
3hnn_A		262	Putative diflavin flavoprotein A 5; PSI-2, protein	99.54
4dik_A		410	Flavoprotein; TM0755, electron transport, DI-iron	99.54
1jjt_A		228	IMP-1 metallo beta-lactamase; metallo-beta-lactama	99.53
2q9u_A		414	A-type flavoprotein; flavodoxin like, beta lactama	99.52
1qh5_A		260	Glyoxalase II, protein (hydroxyacylglutathione hyd	99.52
1xm8_A		254	Glyoxalase II; structural genomics, protein struct	99.52
2zo4_A		317	Metallo-beta-lactamase family protein; hydrolase;	99.52
3iog_A		227	Beta-lactamase; hydrolase, antibiotic resistance,	99.52
2gcu_A		245	Putative hydroxyacylglutathione hydrolase 3; ethyl	99.52
3tp9_A		474	Beta-lactamase and rhodanese domain protein; struc	99.49
2p18_A		311	Glyoxalase II; metalloprotein, beta sandwich, alph	99.49
2fhx_A		246	SPM-1; metallo-beta-lactamase, dinuclear zinc, ant	99.49
2vw8_A		303	PA1000, PQSE; quinolone signal response protein, s	99.49
4eyb_A		270	Beta-lactamase NDM-1; metallo beta lactamase, anti	99.45
3r2u_A		466	Metallo-beta-lactamase family protein; structural	99.45
3h3e_A		267	Uncharacterized protein TM1679; structural genomic	99.38
2cfu_A		658	SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1	99.34
2p97_A		201	Hypothetical protein; putative metal-dependent hyd	99.32
2yhe_A		668	SEC-alkyl sulfatase; hydrolase, inversion, metallo	98.73
3bk2_A		562	RNAse J, metal dependent hydrolase; endoribonuclea	81.16

>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*	Back alignment and structure

Probab=100.00  E-value=2.4e-42  Score=318.33  Aligned_cols=267  Identities=31%  Similarity=0.535  Sum_probs=211.7

Q ss_pred             CCCCCCCCCceEEEEEeccCCCCcCccCccCCCCCCCCCCccccCCCCCCccccceEEEEecCCCCC--ceEEEecCcch
Q 018792           58 DNGVQLPAQQSEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGR--RNILIDAGKFF  135 (350)
Q Consensus        58 ~~~~~~~~~~~~i~~LGtG~~~g~P~~~~~~~~~~~c~~c~~~~~~~~~~~r~~ss~lI~~~~~~~~--~~iLID~G~~~  135 (350)
                      ++......+.|+|+|||||++.|+|.++|      .|.+|..++   +++.|+++|++|+..+ .++  ..+|||||++.
T Consensus        19 ~~~~~~~~~~m~v~~LG~g~~~G~P~~~c------~c~~C~~~~---~~~~R~~~s~li~~~~-~~g~~~~iLID~G~~~   88 (293)
T 3md7_A           19 PGSMTSPRNCLRFTLLGCGSSPGVPRING------DWGKCDPKN---PKNRRRRASLLVERYD-AEGNNTVVVIDTGPDF   88 (293)
T ss_dssp             -----CCCSEEEEEEEECBCTTCBSCTTC------CCTTSCTTC---GGGCBCBCEEEEEEEC-TTCCEEEEEECCCTTH
T ss_pred             CcccccCCCcEEEEEEeecCCCCcccCCC------CCccCCccC---CCCcccccEEEEEecC-CCCceeEEEEECCccH
Confidence            33344566789999999999999999999      999999874   5688999999999410 133  69999999998


Q ss_pred             HHHHHhhCCcCCCCCccEEEecCCcccccCChhHHHHhhccCCccccEEechhhHHHHHHhccccccccCCCCCCcccce
Q 018792          136 YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSEL  215 (350)
Q Consensus       136 ~~~l~~~l~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  215 (350)
                      ..++.+    .++.+||+|||||.|.||++|++.|+........+++||+++.+.+.+...+.+.+.....  ....+.+
T Consensus        89 ~~~l~~----~~~~~id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~  162 (293)
T 3md7_A           89 RMQMID----SGVHMLDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPVG--SSYPPIL  162 (293)
T ss_dssp             HHHHHH----HTCCCCSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCCTT--CCCCCCE
T ss_pred             HHHHHh----cCCCcccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhccccc--cCCCCce
Confidence            877765    3457999999999999999999988764322345799999999999988765544322100  0011234


Q ss_pred             eeEEec-CcceEeCC----EEEEEEEcccCCCccEEEEEECcEEEeCCCCCCCcchhcccCCCCEEEEcccCCCCCCCCC
Q 018792          216 QFNIID-EEPFTVQD----LKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTH  290 (350)
Q Consensus       216 ~~~~i~-~~~~~~~~----~~v~~~~~~H~~g~~s~g~~i~~i~ysGDt~~~~~~~~~~~~~~dlLi~e~~~~~~~~~~H  290 (350)
                      ++..++ ++.+.+++    ++|+++++.|... .++||++++++|+||+.+.++++.+.++++|+||+|+++.. ....|
T Consensus       163 ~~~~l~~g~~~~~g~~~~~~~v~~~~~~H~~~-~~~g~~i~~~~y~gDt~~~~~~~~~~~~~~Dlli~e~~~~~-~~~~H  240 (293)
T 3md7_A          163 SMHDIAPETPFSIEGAGGAIRFEPFSQVHGDI-ESLGFRIGSVVYCTDVSAFPEQSLQYIKDADVLIIGALQYR-PHPSH  240 (293)
T ss_dssp             EEEECCTTCCEEECCTTCCEEEEEEEEEETTE-EEEEEEETTEEEECSCSBCCGGGHHHHTTCSEEEEECCCSS-CBTTB
T ss_pred             EEEEcCCCCcEEECCCCCcEEEEEEEecCCCC-CEEEEEEeEEEEECCCCCCCHHHHHHhcCCCEEEEeCccCC-CCCCC
Confidence            566665 57899999    9999999999853 79999999999999999877889999999999999998754 56789


Q ss_pred             CCHHHHHHHHHHhCCCeEEEEEeecCCChhhHHHHHHHhhhhCCCcEEEcccCeEEEee
Q 018792          291 FGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVM  349 (350)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~vltH~~~~~~~~~~~~~l~~~~~~~~~~v~ia~DGm~i~l~  349 (350)
                      +++++++++++++++++++++|+++.+++.++       .+....++.+|+|||+|+|.
T Consensus       241 ~~~~~a~~~~~~~~~k~lvl~H~~~~~~~~~~-------~~~~~~~v~~a~DG~~i~l~  292 (293)
T 3md7_A          241 FSLGEALEWIEKLSPKRAILTHMHVPLDYETV-------MRETPHHVEPGYDGLRFEVA  292 (293)
T ss_dssp             CCHHHHHHHHHHHCCSEEEEESBCTTCCHHHH-------HHHSCTTEEECCTTCEEEEC
T ss_pred             CCHHHHHHHHHHcCCCEEEEECCCCCCCHHHH-------HhhcCCCcEEeeCCcEEEec
Confidence            99999999999999999999999999875322       22334589999999999885

PyMOL of 3md7

>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A	Back alignment and structure

>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A	Back alignment and structure

>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7	Back alignment and structure

>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*	Back alignment and structure

>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}	Back alignment and structure

>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9	Back alignment and structure

>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A	Back alignment and structure

>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}	Back alignment and structure

>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10	Back alignment and structure

>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*	Back alignment and structure

>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}	Back alignment and structure

>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}	Back alignment and structure

>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*	Back alignment and structure

>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*	Back alignment and structure

>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*	Back alignment and structure

>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}	Back alignment and structure

>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A	Back alignment and structure

>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}	Back alignment and structure

>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}	Back alignment and structure

>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4	Back alignment and structure

>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}	Back alignment and structure

>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10	Back alignment and structure

>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}	Back alignment and structure

>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A	Back alignment and structure

>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}	Back alignment and structure

>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*	Back alignment and structure

>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A	Back alignment and structure

>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}	Back alignment and structure

>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}	Back alignment and structure

>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A	Back alignment and structure

>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0	Back alignment and structure

>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}	Back alignment and structure

>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5	Back alignment and structure

>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A	Back alignment and structure

>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3	Back alignment and structure

>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*	Back alignment and structure

>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*	Back alignment and structure

>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*	Back alignment and structure

>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B	Back alignment and structure

>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A	Back alignment and structure

>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A	Back alignment and structure

>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}	Back alignment and structure

>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}	Back alignment and structure

>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A	Back alignment and structure

>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1	Back alignment and structure

>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2	Back alignment and structure

>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}	Back alignment and structure

>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A	Back alignment and structure

>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A	Back alignment and structure

>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...	Back alignment and structure

>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11	Back alignment and structure

>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*	Back alignment and structure

>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A	Back alignment and structure

>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}	Back alignment and structure

>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*	Back alignment and structure

>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A	Back alignment and structure

>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}	Back alignment and structure

>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A	Back alignment and structure

>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}	Back alignment and structure

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}	Back alignment and structure

>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*	Back alignment and structure

>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}	Back alignment and structure

>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*	Back alignment and structure

>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A	Back alignment and structure

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}	Back alignment and structure

>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}	Back alignment and structure

>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*	Back alignment and structure

>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12	Back alignment and structure

>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}	Back alignment and structure

>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		350
d1xtoa_		304	d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, P	1e-33
d1zkpa1		244	d.157.1.9 (A:1-244) Hypothetical protein BA1088 (B	4e-14
d1y44a1		307	d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Baci	2e-11
d2dkfa1		431	d.157.1.10 (A:1-431) Putative RNA-degradation prot	2e-11
d2i7xa1		514	d.157.1.10 (A:1-422,A:626-717) Cleavage factor two	3e-08
d2cbna1		305	d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Esch	3e-08
d2e7ya1		280	d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Ther	7e-08
d2i7ta1		451	d.157.1.10 (A:9-459) Cleavage and polyadenylation	8e-08
d1wraa1		305	d.157.1.8 (A:30-334) Teichoic acid phosphorylcholi	5e-07
d2az4a1		183	d.157.1.10 (A:56-238) Hypothetical protein EF2904	2e-06
d2cfua2		505	d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudo	4e-05
d1vmea2		250	d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755,	2e-04
d1p9ea_		294	d.157.1.5 (A:) Methyl parathion hydrolase {Pseudom	5e-04
d2gmna1		264	d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Br	0.001
d1znba_		230	d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroi	0.001
d1e5da2		249	d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreducta	0.002
d1ztca1		207	d.157.1.11 (A:1-207) Hypothetical protein TM0894 {	0.003
d1ycga2		249	d.157.1.3 (A:2-250) Nitric oxide reductase N-termi	0.004
d1mqoa_		221	d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus	0.004

>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]} Length = 304	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Coenzyme PQQ synthesis protein B, PqqB
domain: Coenzyme PQQ synthesis protein B, PqqB
species: Pseudomonas putida [TaxId: 303]

 Score =  124 bits (310), Expect = 1e-33
 Identities = 46/320 (14%), Positives = 93/320 (29%), Gaps = 56/320 (17%)

Query: 69  EIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGN-KNRRLNTSILIRYPGPSGRRNI 127
            I  +G+    G P+ +C       C  C    +       R  +SI +   G      I
Sbjct: 2   YIQVLGSAAGGGFPQWNC------NCVNCKGYRDGTLKATARTQSSIALSDDG---VHWI 52

Query: 128 LIDAGKFFYHSALRWFPAY-----GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIP 182
           L +A          + P           I+A+++  S  D   GL  LR+          
Sbjct: 53  LCNASPDIRAQLQAFAPMQPARALRDTGINAIVLLDSQIDHTTGLLSLREG-----CPHQ 107

Query: 183 IYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAG 242
           ++      + +          S    G   + ++            +LK TP P+   A 
Sbjct: 108 VWCTDMVHQDLTTGFPLFNMLSHWNGGLQWNRIELE-GSFVIDACPNLKFTPFPLRSAAP 166

Query: 243 YR-----------------SLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPD- 284
                                    G + Y   + ++ E+    +   + L++D    + 
Sbjct: 167 PYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWED 226

Query: 285 ---------------RSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKL 329
                                 G    LE +     +R + I + +       N      
Sbjct: 227 DEMQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFPRQRKVLIHINNTNPILDENSPERAE 286

Query: 330 METEGLDVQLSYDGLRVPVM 349
           +   G  V++++DG+ + ++
Sbjct: 287 VLRRG--VEVAFDGMSIELL 304

PyMOL of d1xtoa_

>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]} Length = 244	Back information, alignment and structure

>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]} Length = 307	Back information, alignment and structure

>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]} Length = 431	Back information, alignment and structure

>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 514	Back information, alignment and structure

>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]} Length = 305	Back information, alignment and structure

>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]} Length = 280	Back information, alignment and structure

>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 451	Back information, alignment and structure

>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Length = 305	Back information, alignment and structure

>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]} Length = 183	Back information, alignment and structure

>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]} Length = 505	Back information, alignment and structure

>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Length = 250	Back information, alignment and structure

>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]} Length = 294	Back information, alignment and structure

>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]} Length = 264	Back information, alignment and structure

>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]} Length = 230	Back information, alignment and structure

>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]} Length = 249	Back information, alignment and structure

>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]} Length = 207	Back information, alignment and structure

>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]} Length = 249	Back information, alignment and structure

>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]} Length = 221	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		350
d1xtoa_		304	Coenzyme PQQ synthesis protein B, PqqB {Pseudomona	100.0
d2cbna1		305	Ribonuclease Z (RNase Z) {Escherichia coli [TaxId:	100.0
d1y44a1		307	Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId	100.0
d1zkpa1		244	Hypothetical protein BA1088 (BAS1016) {Bacillus an	100.0
d2e7ya1		280	Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax	99.92
d2dkfa1		431	Putative RNA-degradation protein TTHA0252 {Thermus	99.84
d2az4a1		183	Hypothetical protein EF2904 {Enterococcus faecalis	99.76
d2i7ta1		451	Cleavage and polyadenylation specificity factor su	99.7
d2i7xa1		514	Cleavage factor two protein 2, CFT2 {Baker's yeast	99.68
d1p9ea_		294	Methyl parathion hydrolase {Pseudomonas sp. WBC-3	99.65
d1vjna_		209	Hypothetical protein TM0207 {Thermotoga maritima [	99.65
d1k07a_		262	Zn metallo-beta-lactamase {Fluoribacter gormanii,	99.63
d2aioa1		266	Zn metallo-beta-lactamase {Xanthomonas maltophilia	99.57
d2gmna1		264	Zn metallo-beta-lactamase {Bradyrhizobium japonicu	99.57
d1wraa1		305	Teichoic acid phosphorylcholine esterase Pce (LytD	99.56
d1ztca1		207	Hypothetical protein TM0894 {Thermotoga maritima [	99.53
d1ko3a_		230	Zn metallo-beta-lactamase {Pseudomonas aeruginosa,	99.46
d1ycga2		249	Nitric oxide reductase N-terminal domain {Moorella	99.45
d1x8ha_		228	Zn metallo-beta-lactamase {Aeromonas hydrophila, C	99.44
d1e5da2		249	Rubredoxin oxygen:oxidoreductase (ROO), N-terminal	99.44
d1znba_		230	Zn metallo-beta-lactamase {Bacteroides fragilis [T	99.44
d1xm8a_		254	Glyoxalase II (hydroxyacylglutathione hydrolase) {	99.43
d2q0ia1		298	Quinolone signal response protein PqsE {Pseudomona	99.42
d2qeda1		251	Glyoxalase II (hydroxyacylglutathione hydrolase) {	99.4
d1mqoa_		221	Zn metallo-beta-lactamase {Bacillus cereus [TaxId:	99.4
d1qh5a_		260	Glyoxalase II (hydroxyacylglutathione hydrolase) {	99.35
d1m2xa_		219	Zn metallo-beta-lactamase {Chryseobacterium mening	99.34
d2cfua2		505	Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI	99.32
d1vmea2		250	ROO-like flavoprotein TM0755, N-terminal domain {T	99.32
d1jjta_		220	Zn metallo-beta-lactamase {Pseudomonas aeruginosa,	99.31
d2p97a1		200	Hypothetical protein Ava3068 {Anabaena variabilis	99.06
d2i7xa1		514	Cleavage factor two protein 2, CFT2 {Baker's yeast	87.57
d2i7ta1		451	Cleavage and polyadenylation specificity factor su	87.18
d2dkfa1		431	Putative RNA-degradation protein TTHA0252 {Thermus	83.33

>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Coenzyme PQQ synthesis protein B, PqqB
domain: Coenzyme PQQ synthesis protein B, PqqB
species: Pseudomonas putida [TaxId: 303]

Probab=100.00  E-value=4.5e-39  Score=292.53  Aligned_cols=259  Identities=20%  Similarity=0.285  Sum_probs=194.9

Q ss_pred             eEEEEEeccCCCCcCccCccCCCCCCCCCCccccCCC-CCCccccceEEEEecCCCCCceEEEecCcchHHHHHhhC---
Q 018792           68 SEIVFMGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPG-NKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWF---  143 (350)
Q Consensus        68 ~~i~~LGtG~~~g~P~~~~~~~~~~~c~~c~~~~~~~-~~~~r~~ss~lI~~~~~~~~~~iLID~G~~~~~~l~~~l---  143 (350)
                      |+|+|||||++.|+|.++|      .|++|..|+..+ +.+.|+++|++|+.   .++..+|||||++++.|+.+..   
T Consensus         1 M~~~~LGtg~~~g~P~~~c------~c~~C~~ar~~~~p~~~R~~ss~~i~~---~g~~~lLiD~G~~~~~ql~~~~~~~   71 (304)
T d1xtoa_           1 MYIQVLGSAAGGGFPQWNC------NCVNCKGYRDGTLKATARTQSSIALSD---DGVHWILCNASPDIRAQLQAFAPMQ   71 (304)
T ss_dssp             CEEEEEECBCTTCBSCTTC------CSHHHHHHHTTCSCCCCBCBCEEEEES---SSSSEEEESCCTTHHHHHHTCGGGC
T ss_pred             CEEEEEEEeCCCCeecCCC------CCcccchhhcCCCCCCcceeeEEEEEe---CCCeEEEEeCCchHHHHHHhhhhhh
Confidence            8999999999999999999      999999999754 66789999999995   3556899999999999987642   


Q ss_pred             --CcCCCCCccEEEecCCcccccCChhHHHHhhccCCccccEEechhhHHHHHHhccccccccCCCCCCcccceeeEEec
Q 018792          144 --PAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID  221 (350)
Q Consensus       144 --~~~~~~~Id~V~iTH~H~DH~~Gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~  221 (350)
                        .++.+.+||+|||||.|.||+.||+.|...     ...++|+++.........+........     .........+.
T Consensus        72 ~~~~~~~~~i~~I~iTH~H~DH~~GL~~l~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  141 (304)
T d1xtoa_          72 PARALRDTGINAIVLLDSQIDHTTGLLSLREG-----CPHQVWCTDMVHQDLTTGFPLFNMLSH-----WNGGLQWNRIE  141 (304)
T ss_dssp             CCSSSSCCSEEEEECSCCCHHHHGGGGGGGGG-----CCEEEEECHHHHHHTTTTSCHHHHHTT-----STTCEEEEECC
T ss_pred             hhcccCCccceEEEEecCCcCeehhHHHHhhh-----ccccccccchhhhhhhhccchhhhccc-----ccCccceeeee
Confidence              234568999999999999999999988653     257899999888766544332111110     01112222322


Q ss_pred             -Ccce---EeCCEEEEEEEcccCCC-----------ccEEEEEEC------cEEEeCCCCCCCcchhcccCCCCEEEEcc
Q 018792          222 -EEPF---TVQDLKITPLPVWHGAG-----------YRSLGFRFG------NICYISDVSEIPEETYPFLQDCEILIMDA  280 (350)
Q Consensus       222 -~~~~---~~~~~~v~~~~~~H~~g-----------~~s~g~~i~------~i~ysGDt~~~~~~~~~~~~~~dlLi~e~  280 (350)
                       ++.+   ..++++++++++.|...           ..+++|.+.      ++.|.+|+...++......+++|++++++
T Consensus       142 ~~~~~~i~~~~~~~i~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (304)
T d1xtoa_         142 LEGSFVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDG  221 (304)
T ss_dssp             SSSCBCCTTCTTEEEEEEECCCCCCTTSTTTTSCCTTSSEEEEEEETTTCCEEEEESCCSCCCHHHHHHHTTCSEEEEEC
T ss_pred             ccCceeeccCCCcEEeeeeeccccccccceeccccccceeeEEEecccccccccccccceeeehhhhhhhhccchhhhhh
Confidence             2222   34689999999999642           135677774      89999999988888889999999999999


Q ss_pred             cCCCC----------------CCCCCCCHHHHHHHHHHhCCCeEEEEEeecCCChhh-HHHHHHHhhhhCCCcEEEcccC
Q 018792          281 LRPDR----------------SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEK-VNEELLKLMETEGLDVQLSYDG  343 (350)
Q Consensus       281 ~~~~~----------------~~~~H~~~~~~~~~~~~~~~~~~vltH~~~~~~~~~-~~~~l~~~~~~~~~~v~ia~DG  343 (350)
                      ++...                .+..|++++++++.++++++++++|+|++|++.... ..++..+. ..  .++.+|+||
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~H~t~~ea~~~~~~~~~k~lvLtH~sh~~p~~~~~~~~~~~~-~~--~gi~vA~DG  298 (304)
T d1xtoa_         222 TLWEDDEMQRRGVGTRTGREMGHLAQNGPGGMLEVLDGFPRQRKVLIHINNTNPILDENSPERAEV-LR--RGVEVAFDG  298 (304)
T ss_dssp             CCSSTTHHHHHTSCSCCSSSSSCCCSSSSSSHHHHGGGCCSSEEEEESBCTTCGGGSTTCHHHHHH-HH--TTEEECCTT
T ss_pred             hhccchhhhccccccchhhccCCCCCCCHHHHHHHHHhCCCCcEEEEecCCCCcccccCHHHHHHH-hh--CCcEEeeCC
Confidence            86431                346799999999999999999999999999874311 11222222 22  258999999


Q ss_pred             eEEEe
Q 018792          344 LRVPV  348 (350)
Q Consensus       344 m~i~l  348 (350)
                      |+|+|
T Consensus       299 m~i~L  303 (304)
T d1xtoa_         299 MSIEL  303 (304)
T ss_dssp             CEEEC
T ss_pred             CEEEe
Confidence            99987

PyMOL of d1xtoa_

>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]}	Back information, alignment and structure

>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]}	Back information, alignment and structure

>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]}	Back information, alignment and structure

>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]}	Back information, alignment and structure

>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]}	Back information, alignment and structure

>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]}	Back information, alignment and structure

>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}	Back information, alignment and structure

>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]}	Back information, alignment and structure

>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]}	Back information, alignment and structure

>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]}	Back information, alignment and structure

>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]}	Back information, alignment and structure

>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]}	Back information, alignment and structure

>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]}	Back information, alignment and structure

>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]}	Back information, alignment and structure

>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]}	Back information, alignment and structure

>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]}	Back information, alignment and structure

>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]}	Back information, alignment and structure

>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure