Citrus Sinensis ID: 018808


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
MNMNGANSHDIQSLLSSSARDFLIRSNGDQVKLDSLKGKIGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKV
cccccccccccHHHccccccccEEcccccEECcccccccEEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHcccccEECccccHHHHHHHHccccccccEEEEEcccccEEEEccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEcccccCEECccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHccccEEECcccccHHHHHHHcccccccEEEEEcccccEEEccHHHHHHccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccEEccccccc
***************SSSARDFLIRSNGDQVKLDSLKGKIGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTVERIKEMKEQEERAKREQSLRSVLTSHSRDFVISSDGRKISVSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEI*R******TLESVLVSGDLDFVVGK*****
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MNMNGANSHDIQSLLSSSARDFLIRSNGDQVKLDSLKGKIGLYFSASWCGPCQRFTPILAEVYNELSRQGDFEVIFVSGDEDDEAFKGYFSKMPWLAVPFSDSETRDKLDELFKVMGIPHLVILDENGKVLSDGGVEIIREYGVEGYPFTxxxxxxxxxxxxxxxxxxxxxSVLTSHSRDFVISSDGRKISVSDLEGKTIGLYFSMSSYKASAEFTPRLVEVYEKLKGKGESFEIVLISLDDEEESFKRDLGSMPWLALPFKDKSREKLARYFELSTLPTLVIIGPDGKTLHSNVAEAIEEHGVGAFPFTPEKFAELAEIQRAKEESQTLESVLVSGDLDFVVGKNGGKV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable nucleoredoxin 1 Probable thiol-disulfide oxidoreductase required for pollen tube growth and pollen function in the pistil. Seems not to be required for in vitro pollen tube growth. May be involved in the generation of lipid signaling molecules in pistil.probableO80763

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3S9F, chain A
Confidence level:very confident
Coverage over the Query: 172-312
View the alignment between query and template
View the model in PyMOL
Template: 3S9F, chain A
Confidence level:very confident
Coverage over the Query: 14-151
View the alignment between query and template
View the model in PyMOL
Template: 3F8U, chain A
Confidence level:confident
Coverage over the Query: 55-83,108-243,268-296
View the alignment between query and template
View the model in PyMOL
Template: 3HZ4, chain A
Confidence level:confident
Coverage over the Query: 196-243,267-299,310-333
View the alignment between query and template
View the model in PyMOL