Citrus Sinensis ID: 018834

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350
Protein Sequence
MQRLKISNISRYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLFPT
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHcccccccccccccccEEEEEEccEEEEEEccccccccccHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEccccccccccccEEEccccccccccccccccccccHHHHccccccccHHHHHHccccccHHHHHHHcccccccccccHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccHHHHHHHHHccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEcccHHccccHHHHHHHHHccccccccccEEEEEcccEEEEEEccHHHcccEcHHHHHHHHHHHHHHHHcccccEEEEEccccEEEccEcHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEcEEEccccEEEEcccEEEEEccEEEccccEEEccccccccccEcccccccHEEEEEEccccccHHHHHHHcccccEccHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
MQRLKISNISRYFNDLRALSqhrtsssvtddlCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAwendpnigfvsmkgsgrafcaggdiVSLYHFMNQGKLEECKDFFRTLYSFIYLLGthlkphvailngvtmgggagvsipgtfrvacgktvfatpetligfhpdagasfylshlpghLGEFLALTGAKLNGAEMMACGLAThysvseklPLIEEELgklvtddpsVIEACLEKYsdlvypdknsvihridivdkcfglDTVEEIIDSLESeaslindpwcgsTLRLLKEASPLSLKVSLRSireggsgtnggqghctkvestkfgtsvrrhggsllfpt
Flexible Loop (DISEMBL)
mqrlkisnISRYFNDLRALSQhrtsssvtddlCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIreggsgtnggqghctkvestkfgtsvrrhggsllfpt
Low Complexity Region (SEG)
MQRLKISNISRYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLFPT
Disordered region (IsUnstruct)
**********RYFNDL************TDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEA*************************************************
Disordered Region (DISOPRED)
*************************************VEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY***********IHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLFP*
Disordered Region (DISEMBL)
MQRLKISNISRYFNDLRALS*********DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLFPT
Disordered Region (DISPRO)
**RLK*SNISRYFNDLRALSQHRTSSSVTD*LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQRLKISNISRYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLFPT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	350	2.2.26 [Sep-21-2011]
Q5XF59	401	3-hydroxyisobutyryl-CoA h	yes	no	0.822	0.718	0.718	1e-113
Q8RXN4	409	3-hydroxyisobutyryl-CoA h	no	no	0.902	0.772	0.588	1e-110
Q6NMB0	378	Probable 3-hydroxyisobuty	no	no	0.842	0.780	0.503	4e-82
Q9LKJ1	378	3-hydroxyisobutyryl-CoA h	no	no	0.831	0.769	0.479	3e-77
Q1PEY5	378	Probable 3-hydroxyisobuty	no	no	0.831	0.769	0.476	3e-74
Q9SHJ8	387	3-hydroxyisobutyryl-CoA h	no	no	0.808	0.731	0.417	7e-62
Q6NVY1	386	3-hydroxyisobutyryl-CoA h	no	no	0.84	0.761	0.399	4e-54
Q8QZS1	385	3-hydroxyisobutyryl-CoA h	yes	no	0.86	0.781	0.381	2e-53
Q5XIE6	385	3-hydroxyisobutyryl-CoA h	yes	no	0.868	0.789	0.381	1e-52
Q5ZJ60	385	3-hydroxyisobutyryl-CoA h	yes	no	0.857	0.779	0.370	3e-52

>sp|Q5XF59|HIBC4_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial OS=Arabidopsis thaliana GN=At3g60510 PE=2 SV=1

 Score =  409 bits (1052), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 207/288 (71%), Positives = 243/288 (84%)

Query: 29  TDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88
           ++DL  QVLVEG   SR AILNRP ALNAL T+MG +L KL+K WE DPNIGFV MKGSG
Sbjct: 32  SEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSG 91

Query: 89  RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGV 148
           RAFCAGGDIVSLYH   +G  +  ++FF +LYSFIYLLGT+LKPHVAILNGVTMGGG GV
Sbjct: 92  RAFCAGGDIVSLYHLRTRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGV 151

Query: 149 SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMAC 208
           SIPGTFRVA  +T+FATPET+IGFHPDAGASF LSHLPG LGE+L LTG KL+GAEM+AC
Sbjct: 152 SIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLAC 211

Query: 209 GLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 268
           GLATHY  SE++P++EE+L KL+TDDPSV+E+CLEK +++ +P+K  VI RID+++KCF 
Sbjct: 212 GLATHYIRSEEVPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFS 271

Query: 269 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
            DTVEEIIDSLE EAS   D WC +TLR LKE+SPLSLKV+LRSIREG
Sbjct: 272 HDTVEEIIDSLEIEASRRKDTWCITTLRRLKESSPLSLKVALRSIREG 319

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: -

>sp|Q8RXN4|HIBC5_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial OS=Arabidopsis thaliana GN=At4g31810 PE=2 SV=1

 Score =  397 bits (1019), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 190/323 (58%), Positives = 250/323 (77%), Gaps = 7/323 (2%)

Query: 1   MQRLK-ISNISRYFNDLRALSQHRTSSSVTD------DLCNQVLVEGKANSRMAILNRPS 53
           MQ +K +  +S     +R++S  R  S++ +      D  +QVLVEGKA SR AILN PS
Sbjct: 1   MQTVKALRRVSEPLQWVRSVSYGRRFSALPNYSASDADFEDQVLVEGKAKSRAAILNNPS 60

Query: 54  ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113
           +LNAL+  M  +L +L+++WE +P I FV MKGSG+ FC+G D++SLYH +N+G  EE K
Sbjct: 61  SLNALSAPMVGRLKRLYESWEENPAISFVLMKGSGKTFCSGADVLSLYHSINEGNTEESK 120

Query: 114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH 173
            FF  LY F+YL GT+LKP++AI++GVTMG G G+S+PG FRVA  KTV A PE  IGFH
Sbjct: 121 LFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGMFRVATDKTVLAHPEVQIGFH 180

Query: 174 PDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTD 233
           PDAGAS+YLS LPG+LGE+LALTG KLNG EM+ACGLATHY ++ +LPLIEE +GKL+TD
Sbjct: 181 PDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEERIGKLLTD 240

Query: 234 DPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGS 293
           DP+VIE  L +Y DLVYPD +SV+H+I+++DK FGLDTVEEII+++E+EA+   + WC  
Sbjct: 241 DPAVIEDSLAQYGDLVYPDSSSVLHKIELIDKYFGLDTVEEIIEAMENEAANSCNEWCKK 300

Query: 294 TLRLLKEASPLSLKVSLRSIREG 316
           TL+ +KEASPLSLK++L+SIREG
Sbjct: 301 TLKQIKEASPLSLKITLQSIREG 323

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis thaliana GN=At2g30660 PE=2 SV=1

 Score =  305 bits (781), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 150/298 (50%), Positives = 203/298 (68%), Gaps = 3/298 (1%)

Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           +QVLVE K++ R+  LNRP  LNAL  NM ++L +LF+A+E DP++  V +KG GRAFCA
Sbjct: 5   SQVLVEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRAFCA 64

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           GGD+  +   M QGK     DFFR  Y+  Y++ T+ KP V+ILNG+ MG GAGVSI G 
Sbjct: 65  GGDVPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGR 124

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
           FR+A   TVFA PET +G  PD GAS++LS LPG  GE++ LTGA+L+GAE++ACGLATH
Sbjct: 125 FRIATENTVFAMPETSLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELLACGLATH 184

Query: 214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
           +  S +L  +E +L K+ + DPS +   L+ Y+   +  + S  HR+D++D+CF   T+E
Sbjct: 185 FVPSTRLTALETDLCKVGSSDPSFVSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKRTME 244

Query: 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVE 331
           EII +LE E +   D W  +T+R LK++SP SLK+SLRSIRE   G   G GHC   E
Sbjct: 245 EIISALERETTQELDDWSLTTIRALKKSSPSSLKISLRSIRE---GRLQGVGHCLTRE 299

Involved in valine catabolism.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1 PE=1 SV=1

 Score =  289 bits (739), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 141/294 (47%), Positives = 199/294 (67%), Gaps = 3/294 (1%)

Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           +QVLVE K++ R+  LNRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAFCA
Sbjct: 9   SQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCA 68

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           GGD+ ++   +NQG      ++F + Y   Y++ T+ K  V+ILNG+ MGGGAGVS+ G 
Sbjct: 69  GGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGR 128

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
           FR+A   TVFA PET +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH
Sbjct: 129 FRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 188

Query: 214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
           +  S +L  +E +L ++ ++DP+     L+ Y+      + S   R+D++D+CF   TVE
Sbjct: 189 FVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTVE 248

Query: 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHC 327
           EII +LE EA+   D W  +T++ LK+ SP SLK+SLRSIRE   G   G G C
Sbjct: 249 EIISALEREATQEADGWISATIQALKKGSPASLKISLRSIRE---GRLQGVGQC 299

Involved in valine catabolism. May be indirectly involved in benzoic acid biosynthesis and in cold signaling and cold tolerance.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q1PEY5|HIBC2_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 2 OS=Arabidopsis thaliana GN=At2g30650 PE=2 SV=1

 Score =  279 bits (713), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 140/294 (47%), Positives = 198/294 (67%), Gaps = 3/294 (1%)

Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           +QVLVE K++ R+   NRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAF A
Sbjct: 5   SQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSA 64

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           GGDI  +   + QGKL     +F+  Y+  Y+L T+ KP V+ILNG+ MGGGAG+S  G 
Sbjct: 65  GGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGR 124

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
           FR+A   TVFA PET +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH
Sbjct: 125 FRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 184

Query: 214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
           +  S  L  +E EL K+ + + + I   L+ Y++  + +++S  HR+D++D+CF   TVE
Sbjct: 185 FVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVE 244

Query: 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHC 327
           EI  +LE E +   + W  +T++ L++ASP  LK+SLRSIRE   G   G G C
Sbjct: 245 EIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIRE---GRLQGVGQC 295

Involved in valine catabolism.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q9SHJ8|HIBC8_ARATH 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 OS=Arabidopsis thaliana GN=At1g06550 PE=2 SV=2

 Score =  238 bits (606), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 119/285 (41%), Positives = 179/285 (62%), Gaps = 2/285 (0%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V+ E K + R+  LNRP  LN ++  +  KL +  + WE D     + +KG+GRAF AGG
Sbjct: 13  VIGEEKGSVRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTGRAFSAGG 72

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D+   YH   Q   + C +    +Y   Y + T+ K  V+++NG++MGGGA + +P  F 
Sbjct: 73  DLKVFYH--GQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFS 130

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS 215
           V   KTVFATPE   GFH D G S+  S LPGHLGEFLALTGA+LNG E++A G+ATH+ 
Sbjct: 131 VVTEKTVFATPEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKELVAIGMATHFV 190

Query: 216 VSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 275
            S KL  +E  L  L + D  V+++ +E++S+ V  DK+S++++  ++++CF  ++V++I
Sbjct: 191 PSGKLMDLEARLVSLDSGDADVVQSTIEEFSEKVNLDKDSILNKQSVINECFSKESVKQI 250

Query: 276 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGT 320
           I + E+EAS   + W    ++ LK +SP  LK+ L+SIREG   T
Sbjct: 251 IQAFEAEASKDGNEWITPVIKGLKRSSPTGLKIVLQSIREGRKQT 295

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: -

>sp|Q6NVY1|HIBCH_HUMAN 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2

 Score =  212 bits (539), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/303 (39%), Positives = 176/303 (58%), Gaps = 9/303 (2%)

Query: 22  HRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF 81
           H    S   D   +VL+E K  + +  LNRP  LNAL  NM  ++    K WE DP    
Sbjct: 24  HHLRMSKHTDAAEEVLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFL 83

Query: 82  VSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV 140
           + +KG+G +AFCAGGDI  +     + K +    FFR  Y     +G+  KP+VA+++G+
Sbjct: 84  IIIKGAGGKAFCAGGDIRVISE-AEKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGI 142

Query: 141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKL 200
           TMGGG G+S+ G FRVA  K +FA PET IG  PD G  ++L  L G LG FLALTG +L
Sbjct: 143 TMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRL 202

Query: 201 NGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY--SDLVYPDKNSVIH 258
            G ++   G+ATH+  SEKL ++EE+L  L +     I + LE Y     +  DK+ ++ 
Sbjct: 203 KGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILE 262

Query: 259 R-IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGG 317
             +D ++ CF  +TVEEII++L+ + S     +    L+++ + SP SLK++LR + EG 
Sbjct: 263 EHMDKINSCFSANTVEEIIENLQQDGS----SFALEQLKVINKMSPTSLKITLRQLMEGS 318

Query: 318 SGT 320
           S T
Sbjct: 319 SKT 321

Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q8QZS1|HIBCH_MOUSE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1

 Score =  209 bits (533), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/312 (38%), Positives = 179/312 (57%), Gaps = 11/312 (3%)

Query: 13  FNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKA 72
           F     + QH   S  T+    +VL+E +    +  LNRP  LNAL+ NM  ++    K 
Sbjct: 16  FRRASVILQHLRMSMHTE--AAEVLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKT 73

Query: 73  WENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK 131
           WE DP+   + +KG+G +AFCAGGDI +L     + +    +D FR  Y     + +  K
Sbjct: 74  WEQDPDTFLIIIKGAGGKAFCAGGDIKALSE-AKKARQNLTQDLFREEYILNNAIASCQK 132

Query: 132 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE 191
           P+VA+++G+TMGGG G+S+ G FRVA  +++FA PET IG  PD G  ++L  L G LG 
Sbjct: 133 PYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGY 192

Query: 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP 251
           FLALTG +L G ++   G+ATH+  SEKL ++EEEL  L +     +   LE Y      
Sbjct: 193 FLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEELLALKSPSAEDVAGVLESYHAKSKM 252

Query: 252 DKNSVI---HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKV 308
           D++  I     +D ++ CF  +TVE+II++L  + S    P+    ++++ + SP SLK+
Sbjct: 253 DQDKSIIFEEHMDKINSCFSANTVEQIIENLRQDGS----PFAIEQMKVINKMSPTSLKI 308

Query: 309 SLRSIREGGSGT 320
           +LR + EG S T
Sbjct: 309 TLRQLMEGSSKT 320

Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q5XIE6|HIBCH_RAT 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2

 Score =  207 bits (526), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/317 (38%), Positives = 186/317 (58%), Gaps = 13/317 (4%)

Query: 10  SRYFNDLRA--LSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLN 67
           SR+ +  RA  + QH   S  T+    +VL+E +  + +  LNRP  LNAL+ NM  ++ 
Sbjct: 11  SRFSSIRRASVILQHLRMSKHTE--TAEVLLERRGCAGVITLNRPKLLNALSLNMIRQIY 68

Query: 68  KLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 126
              K WE DP+   + +KG+G +AFCAGGDI +L      G+    +D FR  Y     +
Sbjct: 69  PQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQ-TLSQDLFREEYILNNAI 127

Query: 127 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 186
            +  KP+VA+++G+TMGGG G+S+ G FRVA  +++FA PET IG  PD G  ++L  L 
Sbjct: 128 ASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQ 187

Query: 187 GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY- 245
           G LG FLALTG +L G ++   G+ATH+  SEKL ++EEEL  L +     +   LE Y 
Sbjct: 188 GKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEELLALKSPSAEDVAGVLESYH 247

Query: 246 -SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASP 303
               +  DK+ +    +D ++ CF  +TVE+I+++L  + S    P+    ++++ + SP
Sbjct: 248 AKSKMGQDKSIIFEEHMDKINSCFSANTVEQILENLRQDGS----PFAMEQIKVINKMSP 303

Query: 304 LSLKVSLRSIREGGSGT 320
            SLK++LR + EG + T
Sbjct: 304 TSLKITLRQLMEGSTKT 320

Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1

 Score =  205 bits (522), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/310 (37%), Positives = 176/310 (56%), Gaps = 10/310 (3%)

Query: 13  FNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKA 72
           FN L+ + QH  +   TD   + VL++ +  + +  LNRP  LNAL+  M  ++    KA
Sbjct: 15  FNRLQVILQHLKTCKHTDSAAD-VLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKA 73

Query: 73  WENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK 131
           WE DP    + +KG+G +AFCAGGD+ ++      G     +D+FR  Y     +GT  K
Sbjct: 74  WEQDPETFLIIIKGTGEKAFCAGGDVRAIADAGKAGD-TMTRDYFREEYRLDNAIGTCKK 132

Query: 132 PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE 191
           P+VA+++G+TMGGG G+S+ G FRVA  KTVFA PET IG  PD G  ++L  L G +G 
Sbjct: 133 PYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKIGH 192

Query: 192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYP 251
            LALTG +L G +++  G+ATH+  S KLP +E++L  L +     I   L  Y      
Sbjct: 193 LLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIALKSPSKENIADLLNSYHMQTKI 252

Query: 252 DKNS---VIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKV 308
           D+     +   ++ ++  F  +++EEI+  L+ + S    P+    L  + + SP SLK+
Sbjct: 253 DQEKEFVLDEHMERINSIFSANSMEEIVQKLKQDGS----PFATKQLEAINKMSPTSLKL 308

Query: 309 SLRSIREGGS 318
           +LR +REG +
Sbjct: 309 TLRQLREGAT 318

Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: .

EC: 4

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
255541138	415	catalytic, putative [Ricinus communis] g	0.837	0.706	0.771	1e-132
356504605	407	PREDICTED: 3-hydroxyisobutyryl-CoA hydro	0.808	0.695	0.749	1e-125
224136292	415	predicted protein [Populus trichocarpa]	0.848	0.715	0.763	1e-124
357512815	401	3-hydroxyisobutyryl-CoA hydrolase-like p	0.857	0.748	0.692	1e-123
225453474	405	PREDICTED: 3-hydroxyisobutyryl-CoA hydro	0.897	0.775	0.666	1e-119
449442604	406	PREDICTED: 3-hydroxyisobutyryl-CoA hydro	0.914	0.788	0.671	1e-118
225430480	407	PREDICTED: 3-hydroxyisobutyryl-CoA hydro	0.851	0.732	0.669	1e-118
326507476	424	predicted protein [Hordeum vulgare subsp	0.82	0.676	0.696	1e-115
242035143	406	hypothetical protein SORBIDRAFT_01g02960	0.82	0.706	0.689	1e-115
223973415	406	unknown [Zea mays] gi|414867666|tpg|DAA4	0.871	0.751	0.659	1e-115

>gi|255541138|ref|XP_002511633.1| catalytic, putative [Ricinus communis] gi|223548813|gb|EEF50302.1| catalytic, putative [Ricinus communis]

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 226/293 (77%), Positives = 262/293 (89%)

Query: 24  TSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVS 83
           ++S+  DDL  QVLVE KA SR AILNRPSALNALNTNMGA+L KL+K+WE +P++GFV 
Sbjct: 37  SNSTDDDDLDKQVLVESKAYSRTAILNRPSALNALNTNMGARLLKLYKSWEENPDVGFVM 96

Query: 84  MKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMG 143
           MKGSGRAFCAGGDIV+LY+ + +GKLE+CK+FFRTLY+FIY+LGT+LKPHVAIL+G+TMG
Sbjct: 97  MKGSGRAFCAGGDIVTLYNLVKKGKLEDCKEFFRTLYTFIYILGTYLKPHVAILDGITMG 156

Query: 144 GGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA 203
           GGAGVSIPGTFR+A  KTVFATPETLIGFHPDAGASF+LSHLPGHLGE+LALTG  LNG 
Sbjct: 157 GGAGVSIPGTFRIATDKTVFATPETLIGFHPDAGASFHLSHLPGHLGEYLALTGETLNGV 216

Query: 204 EMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIV 263
           EM+ACGLATHYS SE+L LI+++LG+LVTDDPSVIEA LEKY DLV+PDK S +HRI+ V
Sbjct: 217 EMIACGLATHYSYSERLQLIDQQLGQLVTDDPSVIEATLEKYGDLVHPDKMSALHRIETV 276

Query: 264 DKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
           D+CFG DTVEEI ++LESEAS  ND +C STLR LKEASPLSLKVSLRSIREG
Sbjct: 277 DRCFGYDTVEEIFEALESEASGTNDAFCNSTLRRLKEASPLSLKVSLRSIREG 329

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504605|ref|XP_003521086.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial-like [Glycine max]

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 212/283 (74%), Positives = 247/283 (87%)

Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           NQVLVEG   SRMAILNRPSALNALNTNM A L+KL+++WE DP+IGFV +KGSGRAF A
Sbjct: 42  NQVLVEGNGFSRMAILNRPSALNALNTNMAATLHKLYRSWEEDPDIGFVMLKGSGRAFAA 101

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           GGDIV+LYH +N+G LE CK+FFRT YSF+YL+GT+LKPHVA+LNG+TMGGGAG+SIPGT
Sbjct: 102 GGDIVALYHLINKGNLEACKEFFRTAYSFMYLIGTYLKPHVALLNGITMGGGAGISIPGT 161

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
           FRVA  KT+FATPE LIGFHPDA ASFYLSHLPG LGE+LALTG KLNG EM+ACGLATH
Sbjct: 162 FRVATDKTIFATPEVLIGFHPDAAASFYLSHLPGQLGEYLALTGEKLNGVEMVACGLATH 221

Query: 214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
           YS S +LPLIEE+LGKLVTDDPSVIE  LE+Y ++V+ D +SV+ RI+++DKCF  DTVE
Sbjct: 222 YSSSARLPLIEEQLGKLVTDDPSVIETTLEQYGEIVHLDSSSVLQRIEVLDKCFCHDTVE 281

Query: 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
           EI+D++E+ AS  ND WC STL  LKEASPLSLKV+LRSIREG
Sbjct: 282 EIVDAMENAASETNDAWCISTLNKLKEASPLSLKVALRSIREG 324

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136292|ref|XP_002326825.1| predicted protein [Populus trichocarpa] gi|222835140|gb|EEE73575.1| predicted protein [Populus trichocarpa]

 Score =  451 bits (1159), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/300 (76%), Positives = 259/300 (86%), Gaps = 3/300 (1%)

Query: 17  RALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWEND 76
           R+LS   +S    DDL NQVLVE KANSR AILNRPSALNALNTNMGA+L KL+KAWE D
Sbjct: 36  RSLS---SSPPTEDDLDNQVLVEDKANSRSAILNRPSALNALNTNMGARLLKLYKAWEKD 92

Query: 77  PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI 136
            ++GFV++KGSGRAF AGGDIV+LYH +NQGK E C++FF TLY+FIY+LGT+LKPHVAI
Sbjct: 93  SSVGFVTLKGSGRAFSAGGDIVNLYHLINQGKWEACREFFGTLYTFIYVLGTYLKPHVAI 152

Query: 137 LNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALT 196
           LNG+TMGGG G+SIPGTFR+A  KTVFATPETLIGFHPDAGASF+LSHLPGHLGE+LALT
Sbjct: 153 LNGITMGGGTGISIPGTFRLATDKTVFATPETLIGFHPDAGASFFLSHLPGHLGEYLALT 212

Query: 197 GAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSV 256
           G  LNGAEM+ACGLATHY+ SEKL L+E  LGKLVTDDPSVIE  LE+Y DLVYPDK SV
Sbjct: 213 GGTLNGAEMIACGLATHYTNSEKLHLVEHHLGKLVTDDPSVIETSLEQYGDLVYPDKMSV 272

Query: 257 IHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
           +HRI++VDKCF  DTVEEI D+LE EA+  ND W  STLR LKEASPLSLKVSLRSI+EG
Sbjct: 273 LHRIEMVDKCFSHDTVEEIFDALEREAAETNDAWFNSTLRRLKEASPLSLKVSLRSIQEG 332

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357512815|ref|XP_003626696.1| 3-hydroxyisobutyryl-CoA hydrolase-like protein [Medicago truncatula] gi|355520718|gb|AET01172.1| 3-hydroxyisobutyryl-CoA hydrolase-like protein [Medicago truncatula]

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/309 (69%), Positives = 252/309 (81%), Gaps = 9/309 (2%)

Query: 17  RALSQHRTSSSVTDDLCN---------QVLVEGKANSRMAILNRPSALNALNTNMGAKLN 67
           R+L   R S  +T  L N          VLVEG   SR+A+LNRPS+LNA+NTNM A+L+
Sbjct: 10  RSLLMQRNSRRLTTTLSNSVDHHLLQDNVLVEGNGYSRLALLNRPSSLNAINTNMAARLH 69

Query: 68  KLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG 127
           KL+++WE++P+IGFV +KG+GRAF AGGDIVSLY F+ QG LE CK FFRT YSFIYL+G
Sbjct: 70  KLYRSWEDNPDIGFVMLKGTGRAFAAGGDIVSLYRFIKQGNLEACKQFFRTAYSFIYLIG 129

Query: 128 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG 187
           T+LKPHVA+LNG+TMGGGAG+SIPGTFR+A  KTVFATPE LIGFHPDA ASFYLS LPG
Sbjct: 130 TYLKPHVALLNGITMGGGAGISIPGTFRLATDKTVFATPEVLIGFHPDAAASFYLSRLPG 189

Query: 188 HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSD 247
           H+GE+LALTG KLNG EM+ACGLATHYS+  +LPLIEE+LGKLVTDDPSVIE  LE+Y D
Sbjct: 190 HIGEYLALTGEKLNGVEMVACGLATHYSLLARLPLIEEQLGKLVTDDPSVIETTLEQYGD 249

Query: 248 LVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLK 307
           LV+P  +SV+ R++I+DKCFG DTVEEI+D+LE  A    D WC STL  LKEASPLSLK
Sbjct: 250 LVHPGSSSVLQRLEILDKCFGHDTVEEIVDALEVAAGQTKDAWCISTLNRLKEASPLSLK 309

Query: 308 VSLRSIREG 316
           VSLRSIREG
Sbjct: 310 VSLRSIREG 318

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453474|ref|XP_002274299.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial [Vitis vinifera] gi|297734569|emb|CBI16620.3| unnamed protein product [Vitis vinifera]

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/324 (66%), Positives = 260/324 (80%), Gaps = 10/324 (3%)

Query: 1   MQRLKISNISRYFNDLRAL---SQHRTSSSV-----TDDLCNQVLVEGKANSRMAILNRP 52
           MQ LK+  + R  + +R+    + HR  S V      +D  ++VLVEG+  SR AILNRP
Sbjct: 1   MQSLKV--LWRRRSGIRSPPFPTHHRAFSYVPNPAAANDFDSEVLVEGEGCSRTAILNRP 58

Query: 53  SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112
             LNALNT+MGA+L  L+K+WE +P+IGFV MKGSGRAFCAGGDIV LY+ +N+G++E+C
Sbjct: 59  HVLNALNTSMGARLQNLYKSWEENPDIGFVVMKGSGRAFCAGGDIVGLYNLINKGRIEDC 118

Query: 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF 172
           K+FF T+YSFIYL+GT+LKP+VAIL+G+TMGGGAGVSIPG FRVA  +TVFATPETLIGF
Sbjct: 119 KEFFGTVYSFIYLVGTYLKPNVAILDGITMGGGAGVSIPGMFRVATDRTVFATPETLIGF 178

Query: 173 HPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT 232
           H DAGASF+LSHLPG+ GE+LALTG KLNG EM+ACGLATHY+ S KLPLIEE LGKLVT
Sbjct: 179 HTDAGASFHLSHLPGYWGEYLALTGEKLNGPEMIACGLATHYAPSAKLPLIEEGLGKLVT 238

Query: 233 DDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCG 292
           DDPSVIEA LE+Y  L+ PD   ++ RI+ +DKCF   TVEEIID+LESE +   DPWC 
Sbjct: 239 DDPSVIEASLEQYGSLISPDNRGLLQRIETLDKCFSHGTVEEIIDALESETARTQDPWCS 298

Query: 293 STLRLLKEASPLSLKVSLRSIREG 316
           STL+ LKEASPLSLKV LRSIREG
Sbjct: 299 STLKRLKEASPLSLKVCLRSIREG 322

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442604|ref|XP_004139071.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 1, mitochondrial-like [Cucumis sativus]

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/326 (67%), Positives = 264/326 (80%), Gaps = 6/326 (1%)

Query: 1   MQRLKISNISRY-FNDLRALSQHRTSSSVTD-----DLCNQVLVEGKANSRMAILNRPSA 54
           +Q LK++  +R     +R L+Q R   S+ D     D   +VLVEG+A SR AILNRPS 
Sbjct: 2   VQSLKVALFTRRSLQTIRLLTQTRNQCSLLDHSSDHDHEQEVLVEGRAWSRTAILNRPSI 61

Query: 55  LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD 114
           LNALNTNMGA+L++L+ +WE +P++GFV +KGSGRAFCAGGDIVSLYH +N+G++E CK 
Sbjct: 62  LNALNTNMGARLHELYNSWEENPDVGFVVLKGSGRAFCAGGDIVSLYHMINEGEIEHCKK 121

Query: 115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP 174
           FF TLY+FIY++GT+LKPHVAILNG+TMGGG G+SIPGTFRVA  KTVFATPETLIGFHP
Sbjct: 122 FFSTLYAFIYMVGTYLKPHVAILNGITMGGGTGISIPGTFRVATDKTVFATPETLIGFHP 181

Query: 175 DAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDD 234
           DAGASF+LSHLPG +GE+L LTG KL G EM+ACG+ATHYS S +LPLIEE LG LVTDD
Sbjct: 182 DAGASFHLSHLPGRMGEYLGLTGEKLKGEEMVACGVATHYSHSSRLPLIEEHLGNLVTDD 241

Query: 235 PSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGST 294
            S++E+ L K+ D V+ DK SV+HRI+I+DKCF  DTVEEIIDSLE E+S   DPWC ST
Sbjct: 242 ASIVESSLNKFGDRVHLDKTSVLHRIEILDKCFSHDTVEEIIDSLEIESSKTKDPWCIST 301

Query: 295 LRLLKEASPLSLKVSLRSIREGGSGT 320
           L+ LKEASPLSLKVSL+SIREG   T
Sbjct: 302 LKRLKEASPLSLKVSLKSIREGRYQT 327

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430480|ref|XP_002283319.1| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial [Vitis vinifera] gi|296082135|emb|CBI21140.3| unnamed protein product [Vitis vinifera]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 203/303 (66%), Positives = 249/303 (82%), Gaps = 5/303 (1%)

Query: 19  LSQHRTSSSV-----TDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAW 73
            S HR+ S++      DDL  QVLVEG+A SR AILNRPS LNAL   M A+L +L+++W
Sbjct: 22  FSHHRSFSALPNYARNDDLQEQVLVEGRAKSRAAILNRPSDLNALTIPMVARLKRLYESW 81

Query: 74  ENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH 133
           E + ++GFV MKGSGRA C+GGD+V+L   +N+GK+EECK FF TLY F+YLLGT++KP+
Sbjct: 82  EENSDLGFVIMKGSGRALCSGGDVVALNQLINEGKVEECKKFFETLYKFVYLLGTYVKPN 141

Query: 134 VAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFL 193
           VAI++G+TMGGGAG+SIP  FRV   KTVFATPET +GFHPDAGASFYLS LPG+LGE+L
Sbjct: 142 VAIVDGITMGGGAGISIPAMFRVVTDKTVFATPETQMGFHPDAGASFYLSRLPGYLGEYL 201

Query: 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDK 253
           ALTG KLNG EM+ACGLATHYS++ +LPLIEE LGKL+TDDPSVIE+ LE+Y DLVYPDK
Sbjct: 202 ALTGEKLNGVEMIACGLATHYSLTARLPLIEERLGKLITDDPSVIESSLEQYGDLVYPDK 261

Query: 254 NSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSI 313
            SV+H+I+ +DKCF  DTVEEII++LE+EAS   D W  + L+ LKEASPLSLKV+LRSI
Sbjct: 262 RSVLHKIETIDKCFCHDTVEEIINALENEASSSYDEWSATALKKLKEASPLSLKVTLRSI 321

Query: 314 REG 316
           REG
Sbjct: 322 REG 324

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326507476|dbj|BAK03131.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  422 bits (1086), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 200/287 (69%), Positives = 244/287 (85%)

Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           ++VLVEGKA++R ++LNRP  LNAL T MGA+LNK +++WE+ P+IGFV MKGSGRAFCA
Sbjct: 59  DEVLVEGKASARASVLNRPGHLNALTTTMGARLNKFYESWEDSPDIGFVMMKGSGRAFCA 118

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           GGD+V L   +N+GKL+E KDFFRTLYSFIY+LGT+LKPHVAIL+GVTMGGG GVSIPGT
Sbjct: 119 GGDVVGLRQLINEGKLDESKDFFRTLYSFIYVLGTYLKPHVAILDGVTMGGGGGVSIPGT 178

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
           FRVA  +TVFATPE  IGFHPDA ASFYLSHL GH+GE+LALTG KLNG +M+A GLATH
Sbjct: 179 FRVATDRTVFATPEVHIGFHPDAAASFYLSHLTGHVGEYLALTGEKLNGVDMLALGLATH 238

Query: 214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
           YS+S+ L L++E L KLVTDDPSVI++ L +Y DLVYPDK S++HR+ ++DKCF  +TVE
Sbjct: 239 YSMSDHLDLVDERLAKLVTDDPSVIDSSLAQYGDLVYPDKTSIVHRLAVIDKCFSHETVE 298

Query: 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGT 320
           EI+D+LESEA+ +N+ WC   L+ LKEASPL+LKVSLRSIREG   T
Sbjct: 299 EIVDALESEAAQLNEEWCTLALKRLKEASPLALKVSLRSIREGRYQT 345

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242035143|ref|XP_002464966.1| hypothetical protein SORBIDRAFT_01g029600 [Sorghum bicolor] gi|241918820|gb|EER91964.1| hypothetical protein SORBIDRAFT_01g029600 [Sorghum bicolor]

 Score =  421 bits (1081), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/287 (68%), Positives = 242/287 (84%)

Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           ++VLVEGKA +R A+LNRP  LNAL T MGA+LNK +++WE++P+IGFV MKGSGRAFCA
Sbjct: 41  DEVLVEGKATARAAVLNRPGYLNALTTTMGARLNKFYESWEDNPDIGFVMMKGSGRAFCA 100

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           GGD+V L   +++GKLEECKDFF+TLY FIY LGT+LKPH+AIL+GVTMGGG GVSIPGT
Sbjct: 101 GGDVVRLRELISEGKLEECKDFFKTLYMFIYFLGTYLKPHIAILDGVTMGGGGGVSIPGT 160

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
           FR+A  +TVFATPE  IGFHPDA ASFYLSHL GH+GE++ALTG KLNG +M+A GLATH
Sbjct: 161 FRIATDRTVFATPEVHIGFHPDAAASFYLSHLTGHVGEYVALTGEKLNGTDMIALGLATH 220

Query: 214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
           YS+S  L LI+E L KLVTDDPSVI++ L +Y D+VYPDK S++HR++++DKCF  DTVE
Sbjct: 221 YSMSGHLDLIDERLAKLVTDDPSVIDSSLAQYGDMVYPDKESIVHRLEVIDKCFSHDTVE 280

Query: 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGT 320
           EI+D+LESEA+  N+ WC   L+ LKEASPL+LKVSLRSIREG   T
Sbjct: 281 EIVDALESEAASSNEEWCTLALKRLKEASPLALKVSLRSIREGRYQT 327

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|223973415|gb|ACN30895.1| unknown [Zea mays] gi|414867666|tpg|DAA46223.1| TPA: hypothetical protein ZEAMMB73_952637 [Zea mays]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 203/308 (65%), Positives = 251/308 (81%), Gaps = 3/308 (0%)

Query: 13  FNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKA 72
           F  LR LS  +  ++ + D   +VLVEGK ++R A+LNRP  LNAL T MGA+LNK +++
Sbjct: 23  FGGLRPLSSLQPLNAASSD---EVLVEGKTSARAAVLNRPGYLNALTTTMGARLNKFYQS 79

Query: 73  WENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKP 132
           WE++P+IGFV MKGSGRAFCAGGD+V L+  +++GKLEECKDFF+TLY FIY LGT+LKP
Sbjct: 80  WEDNPDIGFVMMKGSGRAFCAGGDVVRLHELISEGKLEECKDFFKTLYMFIYFLGTYLKP 139

Query: 133 HVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF 192
           HVAIL+G+TMGGG GVSIPGTFRVA  +TVFATPE  IGFHPDA ASFYLSHL GH+GE+
Sbjct: 140 HVAILDGITMGGGGGVSIPGTFRVATDRTVFATPEVHIGFHPDAAASFYLSHLTGHVGEY 199

Query: 193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD 252
           +ALTG KLNG +M+A GLATHY +S  L LI+E L KLVTDDPSVI++ L +Y D+VYPD
Sbjct: 200 VALTGEKLNGTDMIALGLATHYFMSGHLDLIDERLAKLVTDDPSVIDSSLAQYGDMVYPD 259

Query: 253 KNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRS 312
           K S++HR++++DKCF  DTVEEI+D+LESEA+  N+ WC   L+ LKEASPL+LKVSLRS
Sbjct: 260 KKSIVHRLEVIDKCFSHDTVEEIVDALESEAASSNEEWCILALKRLKEASPLALKVSLRS 319

Query: 313 IREGGSGT 320
           IREG   T
Sbjct: 320 IREGRYQT 327

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	350
TAIR|locus:2116797	409	AT4G31810 [Arabidopsis thalian	0.902	0.772	0.594	7.1e-100
TAIR|locus:2054437	378	AT2G30660 [Arabidopsis thalian	0.831	0.769	0.506	3.1e-74
TAIR|locus:2152069	378	CHY1 "beta-hydroxyisobutyryl-C	0.808	0.748	0.487	3.3e-70
TAIR|locus:2054517	378	AT2G30650 [Arabidopsis thalian	0.808	0.748	0.484	4.4e-68
TAIR|locus:2009180	387	AT1G06550 [Arabidopsis thalian	0.808	0.731	0.417	3.2e-58
UNIPROTKB|Q6NVY1	386	HIBCH "3-hydroxyisobutyryl-CoA	0.874	0.792	0.393	2.1e-52
MGI|MGI:1923792	385	Hibch "3-hydroxyisobutyryl-Coe	0.877	0.797	0.382	4e-51
RGD|1308392	385	Hibch "3-hydroxyisobutyryl-CoA	0.868	0.789	0.381	4e-51
UNIPROTKB|Q5ZJ60	385	HIBCH "3-hydroxyisobutyryl-CoA	0.851	0.774	0.375	1.7e-50
UNIPROTKB|F1P188	385	HIBCH "3-hydroxyisobutyryl-CoA	0.851	0.774	0.375	2.2e-50

TAIR|locus:2116797 AT4G31810 [Arabidopsis thaliana (taxid:3702)]

 Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
 Identities = 192/323 (59%), Positives = 250/323 (77%)

Query:     1 MQRLK-ISNISRYFNDLRALSQHRTSS-----SVTD-DLCNQVLVEGKANSRMAILNRPS 53
             MQ +K +  +S     +R++S  R  S     S +D D  +QVLVEGKA SR AILN PS
Sbjct:     1 MQTVKALRRVSEPLQWVRSVSYGRRFSALPNYSASDADFEDQVLVEGKAKSRAAILNNPS 60

Query:    54 ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK 113
             +LNAL+  M  +L +L+++WE +P I FV MKGSG+ FC+G D++SLYH +N+G  EE K
Sbjct:    61 SLNALSAPMVGRLKRLYESWEENPAISFVLMKGSGKTFCSGADVLSLYHSINEGNTEESK 120

Query:   114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH 173
              FF  LY F+YL GT+LKP++AI++GVTMG G G+S+PG FRVA  KTV A PE  IGFH
Sbjct:   121 LFFENLYKFVYLQGTYLKPNIAIMDGVTMGCGGGISLPGMFRVATDKTVLAHPEVQIGFH 180

Query:   174 PDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTD 233
             PDAGAS+YLS LPG+LGE+LALTG KLNG EM+ACGLATHY ++ +LPLIEE +GKL+TD
Sbjct:   181 PDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEERIGKLLTD 240

Query:   234 DPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGS 293
             DP+VIE  L +Y DLVYPD +SV+H+I+++DK FGLDTVEEII+++E+EA+   + WC  
Sbjct:   241 DPAVIEDSLAQYGDLVYPDSSSVLHKIELIDKYFGLDTVEEIIEAMENEAANSCNEWCKK 300

Query:   294 TLRLLKEASPLSLKVSLRSIREG 316
             TL+ +KEASPLSLK++L+SIREG
Sbjct:   301 TLKQIKEASPLSLKITLQSIREG 323

GO:0003824 "catalytic activity" evidence=IEA

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=ISS

GO:0006635 "fatty acid beta-oxidation" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0010388 "cullin deneddylation" evidence=RCA

GO:0034968 "histone lysine methylation" evidence=RCA

TAIR|locus:2054437 AT2G30660 [Arabidopsis thaliana (taxid:3702)]

 Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
 Identities = 149/294 (50%), Positives = 202/294 (68%)

Query:    34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
             +QVLVE K++ R+  LNRP  LNAL  NM ++L +LF+A+E DP++  V +KG GRAFCA
Sbjct:     5 SQVLVEEKSSVRILTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQGRAFCA 64

Query:    94 GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
             GGD+  +   M QGK     DFFR  Y+  Y++ T+ KP V+ILNG+ MG GAGVSI G 
Sbjct:    65 GGDVPPVVQNMVQGKWRLGADFFRDQYTLNYVMATYSKPQVSILNGIVMGAGAGVSIHGR 124

Query:   154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
             FR+A   TVFA PET +G  PD GAS++LS LPG  GE++ LTGA+L+GAE++ACGLATH
Sbjct:   125 FRIATENTVFAMPETSLGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAELLACGLATH 184

Query:   214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
             +  S +L  +E +L K+ + DPS +   L+ Y+   +  + S  HR+D++D+CF   T+E
Sbjct:   185 FVPSTRLTALETDLCKVGSSDPSFVSTILDAYTQHPHLKQKSAYHRLDVIDRCFSKRTME 244

Query:   274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHC 327
             EII +LE E +   D W  +T+R LK++SP SLK+SLRSIREG      G GHC
Sbjct:   245 EIISALERETTQELDDWSLTTIRALKKSSPSSLKISLRSIREGRLQ---GVGHC 295

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

TAIR|locus:2152069 CHY1 "beta-hydroxyisobutyryl-CoA hydrolase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 138/283 (48%), Positives = 196/283 (69%)

Query:    34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
             +QVLVE K++ R+  LNRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAFCA
Sbjct:     9 SQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCA 68

Query:    94 GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
             GGD+ ++   +NQG      ++F + Y   Y++ T+ K  V+ILNG+ MGGGAGVS+ G 
Sbjct:    69 GGDVAAVVRDINQGNWRLGANYFSSEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGR 128

Query:   154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
             FR+A   TVFA PET +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH
Sbjct:   129 FRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 188

Query:   214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
             +  S +L  +E +L ++ ++DP+     L+ Y+      + S   R+D++D+CF   TVE
Sbjct:   189 FVPSTRLTALEADLCRINSNDPTFASTILDAYTQHPRLKQQSAYRRLDVIDRCFSRRTVE 248

Query:   274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
             EII +LE EA+   D W  +T++ LK+ SP SLK+SLRSIREG
Sbjct:   249 EIISALEREATQEADGWISATIQALKKGSPASLKISLRSIREG 291

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IGI;IDA

GO:0006574 "valine catabolic process" evidence=NAS;IMP

GO:0006635 "fatty acid beta-oxidation" evidence=TAS

GO:0009733 "response to auxin stimulus" evidence=IMP

GO:0009409 "response to cold" evidence=IMP

TAIR|locus:2054517 AT2G30650 [Arabidopsis thaliana (taxid:3702)]

 Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
 Identities = 137/283 (48%), Positives = 195/283 (68%)

Query:    34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
             +QVLVE K++ R+   NRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAF A
Sbjct:     5 SQVLVEEKSSVRILTFNRPKQLNALSFHMVSRLLQLFLAYEEDPSVKLVVLKGQGRAFSA 64

Query:    94 GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
             GGDI  +   + QGKL     +F+  Y+  Y+L T+ KP V+ILNG+ MGGGAG+S  G 
Sbjct:    65 GGDIPPIVRDILQGKLIRGAHYFKVGYTLNYVLSTYRKPQVSILNGIVMGGGAGLSTNGR 124

Query:   154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
             FR+A   TVFA PET +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH
Sbjct:   125 FRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 184

Query:   214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
             +  S  L  +E EL K+ + + + I   L+ Y++  + +++S  HR+D++D+CF   TVE
Sbjct:   185 FVPSISLTALEAELYKVGSSNQTFISTILDAYAEYPHLNQHSSYHRLDVIDRCFSKRTVE 244

Query:   274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
             EI  +LE E +   + W  +T++ L++ASP  LK+SLRSIREG
Sbjct:   245 EIFSALEREVTQKPNDWLLATIQALEKASPSCLKISLRSIREG 287

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2009180 AT1G06550 [Arabidopsis thaliana (taxid:3702)]

 Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
 Identities = 119/285 (41%), Positives = 179/285 (62%)

Query:    36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
             V+ E K + R+  LNRP  LN ++  +  KL +  + WE D     + +KG+GRAF AGG
Sbjct:    13 VIGEEKGSVRLTTLNRPRQLNVISPEVVFKLAEYLELWEKDDQTKLILIKGTGRAFSAGG 72

Query:    96 DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
             D+   YH   Q   + C +    +Y   Y + T+ K  V+++NG++MGGGA + +P  F 
Sbjct:    73 DLKVFYH--GQESKDSCLEVVYRMYWLCYHIHTYKKTQVSLVNGISMGGGAALMVPMKFS 130

Query:   156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS 215
             V   KTVFATPE   GFH D G S+  S LPGHLGEFLALTGA+LNG E++A G+ATH+ 
Sbjct:   131 VVTEKTVFATPEASFGFHTDCGFSYIHSRLPGHLGEFLALTGARLNGKELVAIGMATHFV 190

Query:   216 VSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 275
              S KL  +E  L  L + D  V+++ +E++S+ V  DK+S++++  ++++CF  ++V++I
Sbjct:   191 PSGKLMDLEARLVSLDSGDADVVQSTIEEFSEKVNLDKDSILNKQSVINECFSKESVKQI 250

Query:   276 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGT 320
             I + E+EAS   + W    ++ LK +SP  LK+ L+SIREG   T
Sbjct:   251 IQAFEAEASKDGNEWITPVIKGLKRSSPTGLKIVLQSIREGRKQT 295

GO:0003824 "catalytic activity" evidence=IEA

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006635 "fatty acid beta-oxidation" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

GO:0080167 "response to karrikin" evidence=IEP

UNIPROTKB|Q6NVY1 HIBCH "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 125/318 (39%), Positives = 183/318 (57%)

Query:     9 ISRY--FNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKL 66
             +SR+  F     +  H   S  TD    +VL+E K  + +  LNRP  LNAL  NM  ++
Sbjct:    10 MSRFNAFKRTNTILHHLRMSKHTD-AAEEVLLEKKGCTGVITLNRPKFLNALTLNMIRQI 68

Query:    67 NKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL 125
                 K WE DP    + +KG+G +AFCAGGDI  +     + K +    FFR  Y     
Sbjct:    69 YPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISE-AEKAKQKIAPVFFREEYMLNNA 127

Query:   126 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL 185
             +G+  KP+VA+++G+TMGGG G+S+ G FRVA  K +FA PET IG  PD G  ++L  L
Sbjct:   128 VGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRL 187

Query:   186 PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY 245
              G LG FLALTG +L G ++   G+ATH+  SEKL ++EE+L  L +     I + LE Y
Sbjct:   188 QGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENY 247

Query:   246 --SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEAS 302
                  +  DK+ ++   +D ++ CF  +TVEEII++L+ + S     +    L+++ + S
Sbjct:   248 HTESKIDRDKSFILEEHMDKINSCFSANTVEEIIENLQQDGS----SFALEQLKVINKMS 303

Query:   303 PLSLKVSLRSIREGGSGT 320
             P SLK++LR + EG S T
Sbjct:   304 PTSLKITLRQLMEGSSKT 321

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IEA

GO:0006574 "valine catabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0009083 "branched-chain amino acid catabolic process" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

MGI|MGI:1923792 Hibch "3-hydroxyisobutyryl-Coenzyme A hydrolase" [Mus musculus (taxid:10090)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 122/319 (38%), Positives = 185/319 (57%)

Query:     6 ISNISRYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAK 65
             +S +S  F     + QH   S  T+    +VL+E +    +  LNRP  LNAL+ NM  +
Sbjct:    10 LSRVSS-FRRASVILQHLRMSMHTE--AAEVLLERRGCGGVITLNRPKFLNALSLNMIRQ 66

Query:    66 LNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY 124
             +    K WE DP+   + +KG+G +AFCAGGDI +L     + +    +D FR  Y    
Sbjct:    67 IYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKALSE-AKKARQNLTQDLFREEYILNN 125

Query:   125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH 184
              + +  KP+VA+++G+TMGGG G+S+ G FRVA  +++FA PET IG  PD G  ++L  
Sbjct:   126 AIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPR 185

Query:   185 LPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEK 244
             L G LG FLALTG +L G ++   G+ATH+  SEKL ++EEEL  L +     +   LE 
Sbjct:   186 LQGKLGYFLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEELLALKSPSAEDVAGVLES 245

Query:   245 YSDLVYPDKN-SVI--HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEA 301
             Y      D++ S+I    +D ++ CF  +TVE+II++L  + S    P+    ++++ + 
Sbjct:   246 YHAKSKMDQDKSIIFEEHMDKINSCFSANTVEQIIENLRQDGS----PFAIEQMKVINKM 301

Query:   302 SPLSLKVSLRSIREGGSGT 320
             SP SLK++LR + EG S T
Sbjct:   302 SPTSLKITLRQLMEGSSKT 320

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009083 "branched-chain amino acid catabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

RGD|1308392 Hibch "3-hydroxyisobutyryl-CoA hydrolase" [Rattus norvegicus (taxid:10116)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 121/317 (38%), Positives = 186/317 (58%)

Query:    10 SRYFNDLRA--LSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLN 67
             SR+ +  RA  + QH   S  T+    +VL+E +  + +  LNRP  LNAL+ NM  ++ 
Sbjct:    11 SRFSSIRRASVILQHLRMSKHTETA--EVLLERRGCAGVITLNRPKLLNALSLNMIRQIY 68

Query:    68 KLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL 126
                K WE DP+   + +KG+G +AFCAGGDI +L      G+    +D FR  Y     +
Sbjct:    69 PQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLS-QDLFREEYILNNAI 127

Query:   127 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP 186
              +  KP+VA+++G+TMGGG G+S+ G FRVA  +++FA PET IG  PD G  ++L  L 
Sbjct:   128 ASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQ 187

Query:   187 GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY- 245
             G LG FLALTG +L G ++   G+ATH+  SEKL ++EEEL  L +     +   LE Y 
Sbjct:   188 GKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEELLALKSPSAEDVAGVLESYH 247

Query:   246 -SDLVYPDKNSVIHR-IDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASP 303
                 +  DK+ +    +D ++ CF  +TVE+I+++L  + S    P+    ++++ + SP
Sbjct:   248 AKSKMGQDKSIIFEEHMDKINSCFSANTVEQILENLRQDGS----PFAMEQIKVINKMSP 303

Query:   304 LSLKVSLRSIREGGSGT 320
              SLK++LR + EG + T
Sbjct:   304 TSLKITLRQLMEGSTKT 320

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006574 "valine catabolic process" evidence=IEA

UNIPROTKB|Q5ZJ60 HIBCH "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial" [Gallus gallus (taxid:9031)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 117/312 (37%), Positives = 181/312 (58%)

Query:    13 FNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKA 72
             FN L+ + QH  +   TD   + VL++ +  + +  LNRP  LNAL+  M  ++    KA
Sbjct:    15 FNRLQVILQHLKTCKHTDSAAD-VLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKA 73

Query:    73 WENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC--KDFFRTLYSFIYLLGTH 129
             WE DP    + +KG+G +AFCAGGD+ ++    + GK  +   +D+FR  Y     +GT 
Sbjct:    74 WEQDPETFLIIIKGTGEKAFCAGGDVRAI---ADAGKAGDTMTRDYFREEYRLDNAIGTC 130

Query:   130 LKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189
              KP+VA+++G+TMGGG G+S+ G FRVA  KTVFA PET IG  PD G  ++L  L G +
Sbjct:   131 KKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKI 190

Query:   190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY--SD 247
             G  LALTG +L G +++  G+ATH+  S KLP +E++L  L +     I   L  Y    
Sbjct:   191 GHLLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIALKSPSKENIADLLNSYHMQT 250

Query:   248 LVYPDKNSVI-HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSL 306
              +  +K  V+   ++ ++  F  +++EEI+  L+ + S    P+    L  + + SP SL
Sbjct:   251 KIDQEKEFVLDEHMERINSIFSANSMEEIVQKLKQDGS----PFATKQLEAINKMSPTSL 306

Query:   307 KVSLRSIREGGS 318
             K++LR +REG +
Sbjct:   307 KLTLRQLREGAT 318

GO:0003860 "3-hydroxyisobutyryl-CoA hydrolase activity" evidence=IEA

GO:0006574 "valine catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|F1P188 HIBCH "3-hydroxyisobutyryl-CoA hydrolase, mitochondrial" [Gallus gallus (taxid:9031)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 117/312 (37%), Positives = 181/312 (58%)

Query:    13 FNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKA 72
             FN L+ + QH  +   TD   + VL++ +  + +  LNRP  LNAL+  M  ++    KA
Sbjct:    15 FNRLQVILQHLKTCKHTDSAAD-VLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKA 73

Query:    73 WENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC--KDFFRTLYSFIYLLGTH 129
             WE DP    + +KG+G +AFCAGGD+ ++    + GK  +   +D+FR  Y     +GT 
Sbjct:    74 WEQDPETFLIIIKGTGEKAFCAGGDVRAI---ADAGKAGDTMTRDYFREEYRLDNAIGTC 130

Query:   130 LKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL 189
              KP+VA+++G+TMGGG G+S+ G FRVA  KTVFA PET IG  PD G  ++L  L G +
Sbjct:   131 KKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKI 190

Query:   190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY--SD 247
             G  LALTG +L G +++  G+ATH+  S KLP +E++L  L +     I   L  Y    
Sbjct:   191 GHLLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIALKSPSKENIADLLNSYHMQT 250

Query:   248 LVYPDKNSVI-HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSL 306
              +  +K  V+   ++ ++  F  +++EEI+  L+ + S    P+    L  + + SP SL
Sbjct:   251 KIDQEKEFVLDEHMERINSIFSANSMEEIVHKLKQDGS----PFATKQLEAINKMSPTSL 306

Query:   307 KVSLRSIREGGS 318
             K++LR +REG +
Sbjct:   307 KLTLRQLREGAT 318

GO:0005739 "mitochondrion" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5XF59	HIBC4_ARATH	3, ., 1, ., 2, ., -	0.7187	0.8228	0.7182	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.2	0.766
3rd Layer	3.1.2.4	0.824

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.40.97.1	hypothetical protein (381 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_VIII0916	enoyl-CoA hydratase (EC-4.2.1.17) (265 aa)			•			•		•	0.907
	grail3.0006050201	enoyl-CoA hydratase (EC-4.2.1.17) (265 aa)			•			•		•	0.907
	estExt_fgenesh4_pg.C_LG_VI1023	SubName- Full=Putative uncharacterized protein; (380 aa)			•			•		•	0.907
	eugene3.00013051	hypothetical protein (348 aa)	•	•				•			0.900

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	350
PLN02851	407	PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrol	1e-167
PLN02157	401	PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrol	1e-153
PLN02874	379	PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrol	1e-110
PLN02988	381	PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrol	3e-95
PRK05617	342	PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrol	6e-89
cd06558	195	cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme	5e-40
COG1024	257	COG1024, CaiD, Enoyl-CoA hydratase/carnithine race	2e-37
pfam00378	245	pfam00378, ECH, Enoyl-CoA hydratase/isomerase fami	1e-22
PRK06688	259	PRK06688, PRK06688, enoyl-CoA hydratase; Provision	2e-20
PRK05809	260	PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydrata	1e-17
PRK06072	248	PRK06072, PRK06072, enoyl-CoA hydratase; Provision	2e-17
PRK08138	261	PRK08138, PRK08138, enoyl-CoA hydratase; Provision	2e-17
PRK05980	260	PRK05980, PRK05980, enoyl-CoA hydratase; Provision	6e-17
PRK05862	257	PRK05862, PRK05862, enoyl-CoA hydratase; Provision	6e-16
pfam13766	117	pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal	1e-15
PRK05995	262	PRK05995, PRK05995, enoyl-CoA hydratase; Provision	2e-15
PRK07657	260	PRK07657, PRK07657, enoyl-CoA hydratase; Provision	3e-14
PRK06494	259	PRK06494, PRK06494, enoyl-CoA hydratase; Provision	5e-14
PRK06210	272	PRK06210, PRK06210, enoyl-CoA hydratase; Provision	8e-14
PRK05870	249	PRK05870, PRK05870, enoyl-CoA hydratase; Provision	1e-13
PRK06190	258	PRK06190, PRK06190, enoyl-CoA hydratase; Provision	5e-13
TIGR02280	256	TIGR02280, PaaB1, phenylacetate degradation probab	1e-12
PLN02664	275	PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-d	2e-12
PLN02600	251	PLN02600, PLN02600, enoyl-CoA hydratase	2e-12
PRK06023	251	PRK06023, PRK06023, enoyl-CoA hydratase; Provision	2e-12
PRK06127	269	PRK06127, PRK06127, enoyl-CoA hydratase; Provision	3e-12
PRK07659	260	PRK07659, PRK07659, enoyl-CoA hydratase; Provision	4e-12
PRK07511	260	PRK07511, PRK07511, enoyl-CoA hydratase; Provision	6e-12
PRK07509	262	PRK07509, PRK07509, enoyl-CoA hydratase; Provision	2e-11
PRK09674	255	PRK09674, PRK09674, enoyl-CoA hydratase-isomerase;	3e-11
PRK08260	296	PRK08260, PRK08260, enoyl-CoA hydratase; Provision	3e-11
PRK06142	272	PRK06142, PRK06142, enoyl-CoA hydratase; Provision	1e-10
PLN02888	265	PLN02888, PLN02888, enoyl-CoA hydratase	6e-10
PRK07799	263	PRK07799, PRK07799, enoyl-CoA hydratase; Provision	6e-10
PRK03580	261	PRK03580, PRK03580, carnitinyl-CoA dehydratase; Pr	1e-09
PRK08140	262	PRK08140, PRK08140, enoyl-CoA hydratase; Provision	1e-09
TIGR02441	737	TIGR02441, fa_ox_alpha_mit, fatty acid oxidation c	2e-09
PRK07260	255	PRK07260, PRK07260, enoyl-CoA hydratase; Provision	2e-09
PRK07658	257	PRK07658, PRK07658, enoyl-CoA hydratase; Provision	3e-09
PRK05674	265	PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydr	4e-09
PRK06144	262	PRK06144, PRK06144, enoyl-CoA hydratase; Provision	5e-09
PRK09120	275	PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydrata	7e-09
PRK06495	257	PRK06495, PRK06495, enoyl-CoA hydratase; Provision	4e-08
PRK12478	298	PRK12478, PRK12478, enoyl-CoA hydratase; Provision	1e-07
PRK09245	266	PRK09245, PRK09245, enoyl-CoA hydratase; Provision	1e-07
PRK08150	255	PRK08150, PRK08150, enoyl-CoA hydratase; Provision	3e-07
PRK07468	262	PRK07468, PRK07468, enoyl-CoA hydratase; Provision	7e-07
PRK08252	254	PRK08252, PRK08252, enoyl-CoA hydratase; Provision	1e-06
PRK08139	266	PRK08139, PRK08139, enoyl-CoA hydratase; Validated	3e-06
PRK08258	277	PRK08258, PRK08258, enoyl-CoA hydratase; Provision	4e-06
TIGR01929	259	TIGR01929, menB, naphthoate synthase (dihydroxynap	5e-06
PRK05981	266	PRK05981, PRK05981, enoyl-CoA hydratase; Provision	6e-06
TIGR03200	360	TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-car	7e-06
TIGR02437	714	TIGR02437, FadB, fatty oxidation complex, alpha su	1e-05
PRK07938	249	PRK07938, PRK07938, enoyl-CoA hydratase; Provision	1e-05
PRK08272	302	PRK08272, PRK08272, enoyl-CoA hydratase; Provision	1e-05
PRK07827	260	PRK07827, PRK07827, enoyl-CoA hydratase; Provision	2e-05
PRK07327	268	PRK07327, PRK07327, enoyl-CoA hydratase; Provision	4e-05
PRK08290	288	PRK08290, PRK08290, enoyl-CoA hydratase; Provision	9e-05
PRK05864	276	PRK05864, PRK05864, enoyl-CoA hydratase; Provision	3e-04
PRK08259	254	PRK08259, PRK08259, enoyl-CoA hydratase; Provision	4e-04
PLN02921	327	PLN02921, PLN02921, naphthoate synthase	0.001
TIGR03210	256	TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hyd	0.001
TIGR03189	251	TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecar	0.003

>gnl|CDD|178443 PLN02851, PLN02851, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score =  473 bits (1218), Expect = e-167
 Identities = 203/324 (62%), Positives = 259/324 (79%), Gaps = 8/324 (2%)

Query: 1   MQRLK-ISNISRYFNDLR--ALSQHRTSSSV-----TDDLCNQVLVEGKANSRMAILNRP 52
           MQR+K +  ++     +R  ++S  R+ S++      DDL +QVLVEG+A SR AILNRP
Sbjct: 1   MQRVKALRRVAVPLQWVRFGSVSYGRSFSALPNYAANDDLQDQVLVEGRAKSRAAILNRP 60

Query: 53  SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC 112
           S+LNAL   M A+L +L+++WE +P+IGFV MKGSGRAFC+G D+VSLYH +N+G +EEC
Sbjct: 61  SSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRAFCSGADVVSLYHLINEGNVEEC 120

Query: 113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF 172
           K FF  LY F+YL GT+LKP+VAI++G+TMG GAG+SIPG FRV   KTVFA PE  +GF
Sbjct: 121 KLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGF 180

Query: 173 HPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVT 232
           HPDAGAS+YLS LPG+LGE+LALTG KLNG EM+ACGLATHY ++ +LPLIEE LGKL+T
Sbjct: 181 HPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEERLGKLLT 240

Query: 233 DDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCG 292
           DDP+VIE  L +Y DLVYPDK+SV+H+I+ +DKCFG DTVEEII++LE+EA+   D WC 
Sbjct: 241 DDPAVIEDSLAQYGDLVYPDKSSVLHKIETIDKCFGHDTVEEIIEALENEAASSYDEWCK 300

Query: 293 STLRLLKEASPLSLKVSLRSIREG 316
             L+ +KEASPLSLKV+L+SIREG
Sbjct: 301 KALKKIKEASPLSLKVTLQSIREG 324

Length = 407

>gnl|CDD|177817 PLN02157, PLN02157, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score =  436 bits (1122), Expect = e-153
 Identities = 206/288 (71%), Positives = 241/288 (83%)

Query: 29  TDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG 88
            +DL  QVLVEG   SR AILNRP ALNAL T+MG +L KL+K WE DPNIGFV MKGSG
Sbjct: 32  PEDLDYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSG 91

Query: 89  RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGV 148
           RAFCAGGDIVSLYH   +G  +  ++FF +LYSFIYLLGT+LKPHVAILNGVTMGGG GV
Sbjct: 92  RAFCAGGDIVSLYHLRKRGSPDAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGV 151

Query: 149 SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMAC 208
           SIPGTFRVA  +T+FATPET+IGFHPDAGASF LSHLPG LGE+L LTG KL+GAEM+AC
Sbjct: 152 SIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEYLGLTGLKLSGAEMLAC 211

Query: 209 GLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG 268
           GLATHY  SE++P++EE+L KL+TDDPSV+E+CLEK +++ +P+K  VI RID+++KCF 
Sbjct: 212 GLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFS 271

Query: 269 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
            DTVEEIIDSLE EA    D WC +TLR LKE+SPLSLKV+LRSIREG
Sbjct: 272 HDTVEEIIDSLEIEAGRRKDTWCITTLRRLKESSPLSLKVALRSIREG 319

Length = 401

>gnl|CDD|178462 PLN02874, PLN02874, 3-hydroxyisobutyryl-CoA hydrolase-like protein

 Score =  325 bits (836), Expect = e-110
 Identities = 132/296 (44%), Positives = 188/296 (63%), Gaps = 5/296 (1%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           VL E K   R+  LNRP  LN ++ ++ + L +  + WE D ++  + +KG+GRAF AGG
Sbjct: 13  VLGEEKGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGG 72

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D+   Y    +   + C +    +Y   Y + T+ K  VA+++G+ MGGGAG+ +P  FR
Sbjct: 73  DLKMFYD--GRESDDSCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFR 130

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS 215
           V   KTVFATPE  +GFH D G S+ LS LPGHLGE+LALTGA+LNG EM+ACGLATH+ 
Sbjct: 131 VVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLGEYLALTGARLNGKEMVACGLATHFV 190

Query: 216 VSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEI 275
            SEKLP +E+ L  L + D S ++  +E++S  V  D++S++++   +++CF  DTVEEI
Sbjct: 191 PSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKDTVEEI 250

Query: 276 IDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVE 331
           I + ESEAS   + W   TL+ L+ +SP  LK++LRSIRE   G       C K E
Sbjct: 251 IKAFESEASKTGNEWIKETLKGLRRSSPTGLKITLRSIRE---GRKQSLAECLKKE 303

Length = 379

>gnl|CDD|178568 PLN02988, PLN02988, 3-hydroxyisobutyryl-CoA hydrolase

 Score =  288 bits (737), Expect = 3e-95
 Identities = 140/283 (49%), Positives = 195/283 (68%)

Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           +QVLVE K++ R+  LNRP  LNAL+ +M ++L +LF A+E DP++  V +KG GRAFCA
Sbjct: 9   SQVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCA 68

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           GGD+ ++   + QG      +FF   Y   Y++ T+ K  V+ILNG+ MGGGAGVS+ G 
Sbjct: 69  GGDVAAVVRDIEQGNWRLGANFFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGR 128

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
           FR+A   TVFA PET +G  PD GAS++LS LPG  GE++ LTGA+L+GAEM+ACGLATH
Sbjct: 129 FRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVGLTGARLDGAEMLACGLATH 188

Query: 214 YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVE 273
           +  S +L  +E +L ++ ++DP+     L+ Y+        S  HR+D++D+CF   TVE
Sbjct: 189 FVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVE 248

Query: 274 EIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
           EII +LE EA+   D W  +T++ LK+ASP SLK+SLRSIREG
Sbjct: 249 EIISALEREATQEADGWISATIQALKKASPASLKISLRSIREG 291

Length = 381

>gnl|CDD|235533 PRK05617, PRK05617, 3-hydroxyisobutyryl-CoA hydrolase; Provisional

 Score =  270 bits (692), Expect = 6e-89
 Identities = 104/274 (37%), Positives = 155/274 (56%), Gaps = 8/274 (2%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 107
           LNRP ALNAL+  M   ++    AWE+D  +  V ++G+G R FCAGGDI +LY     G
Sbjct: 18  LNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAG 77

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
                  FFR  Y    L+  + KP++A+++G+ MGGG G+S  G+ R+   +T  A PE
Sbjct: 78  DPLAADRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPE 137

Query: 168 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 227
           T IGF PD G +++LS  PG LG +LALTGA+++ A+ +  GLA H+  S  LP + + L
Sbjct: 138 TGIGFFPDVGGTYFLSRAPGALGTYLALTGARISAADALYAGLADHFVPSADLPALLDAL 197

Query: 228 GKLVTDDPS-VIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLI 286
             L  D  + V++A L  ++       + +  +   +D+CF  DTVE+II +LE++    
Sbjct: 198 ISLRWDSGADVVDAALAAFA--TPAPASELAAQRAWIDECFAGDTVEDIIAALEADG--- 252

Query: 287 NDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGT 320
              +   T   L+  SP SLKV+L  +R     T
Sbjct: 253 -GEFAAKTADTLRSRSPTSLKVTLEQLRRARGLT 285

Length = 342

>gnl|CDD|119339 cd06558, crotonase-like, Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

 Score =  139 bits (353), Expect = 5e-40
 Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 3/173 (1%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP   NAL+  M  +L       E DP++  V + G+G+AFCAG D+  L    + G 
Sbjct: 14  LNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAG- 72

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            EE + F R L   +  L    KP +A +NG  +GGG  +++    R+A     F  PE 
Sbjct: 73  -EEARAFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEV 131

Query: 169 LIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220
            +G  P  G +  L  L G      L LTG +++  E +  GL       E+L
Sbjct: 132 KLGLVPGGGGTQRLPRLVGPARARELLLTGRRISAEEALELGLVDEVVPDEEL 184

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole. Length = 195

>gnl|CDD|223955 COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

 Score =  134 bits (340), Expect = 2e-37
 Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 5/191 (2%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LVE +    +  LNRP  LNALN  M  +L +     E DP++  V + G+G+AF AG 
Sbjct: 7   ILVEREDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGA 66

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D+         G   E  +  +     +  L    KP +A +NG  +GGG  +++    R
Sbjct: 67  DL-KELLSPEDGNAAE--NLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIR 123

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHY 214
           +A     F  PE  +G  P  G +  L  L G      L LTG  ++ AE +  GL    
Sbjct: 124 IAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAKELLLTGEPISAAEALELGLVDE- 182

Query: 215 SVSEKLPLIEE 225
            V +   L+E 
Sbjct: 183 VVPDAEELLER 193

Length = 257

>gnl|CDD|201191 pfam00378, ECH, Enoyl-CoA hydratase/isomerase family

 Score = 94.7 bits (236), Expect = 1e-22
 Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 5/163 (3%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+RP A+NAL+  +  +L +  +  E DP++  + + G   AF AG DI  +        
Sbjct: 13  LDRPEAVNALSAELLTELIQALEKLEQDPSVKAIVLTGGPGAFSAGADIKEMAA----EP 68

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
           L +   F          L    KP +A +NG  +GGG  +++   +R+A     F  PE 
Sbjct: 69  LAQQAQFSLEAQDLWSRLEDLPKPVIAAVNGYALGGGLELALACDYRIAADNAKFGLPEV 128

Query: 169 LIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGL 210
            +G  P AG +  L  + G      + LTG ++   E +  GL
Sbjct: 129 KLGIIPGAGGTQRLPRIIGVSAALEMLLTGRRIRAQEALKMGL 171

This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase. Length = 245

>gnl|CDD|235852 PRK06688, PRK06688, enoyl-CoA hydratase; Provisional

 Score = 89.2 bits (222), Expect = 2e-20
 Identities = 52/167 (31%), Positives = 71/167 (42%), Gaps = 8/167 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           +NRP   NAL   M   L    +A   DP +  V + G+GRAF AGGDI     F     
Sbjct: 20  INRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKD---FPKAPP 76

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
             +  D    +  F+  +    KP VA +NG  +G G  +++      A     F+ P  
Sbjct: 77  --KPPDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFA 134

Query: 169 LIGFHPDAGASFYLSHLPGHL--GEFLALTGAKLNGAEMMACGLATH 213
            +G  PDAG S  L  L G     E + L G  L+  E +  GL   
Sbjct: 135 KLGLCPDAGGSALLPRLIGRARAAE-MLLLGEPLSAEEALRIGLVNR 180

Length = 259

>gnl|CDD|180270 PRK05809, PRK05809, 3-hydroxybutyryl-CoA dehydratase; Validated

 Score = 80.9 bits (200), Expect = 1e-17
 Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 27/223 (12%)

Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFC 92
             V++E + +  +  +NRP ALNALN+    +L+ +    END N+  V + G+G +AF 
Sbjct: 4   KNVILEKEGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFV 63

Query: 93  AGGDIVSLYHFMNQGKLEECKDF-------FRTLYSFIYLLGTHLKPHVAILNGVTMGGG 145
           AG DI      M     EE + F       FR L      L    KP +A +NG  +GGG
Sbjct: 64  AGADISE----MKDLNEEEGRKFGLLGNKVFRKL----ENLD---KPVIAAINGFALGGG 112

Query: 146 AGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGA 203
             +S+    R+A  K  F  PE  +G  P  G +  L+ +  PG   E L  TG  +N  
Sbjct: 113 CELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKAKE-LIYTGDMINAE 171

Query: 204 EMMACGLATHYSVSEKLPLIEEELG---KLVTDDPSVIEACLE 243
           E +  GL     V E   L+EE      K+  + P  ++ C +
Sbjct: 172 EALRIGLVN--KVVEPEKLMEEAKALANKIAANAPIAVKLCKD 212

Length = 260

>gnl|CDD|168377 PRK06072, PRK06072, enoyl-CoA hydratase; Provisional

 Score = 80.6 bits (199), Expect = 2e-17
 Identities = 48/175 (27%), Positives = 72/175 (41%), Gaps = 7/175 (4%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           + VE +    +  ++RP  LNALN  M  +     K    DP I  V + G GRAFC G 
Sbjct: 2   IKVESREGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGA 61

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D+                D   T Y  I  +    K +++ +NGVT G   G+++   F+
Sbjct: 62  DLSEF-----APDFAI--DLRETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFK 114

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGL 210
            A     F T    +G   D G +++L  L G     + + G +    E    GL
Sbjct: 115 FASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILVLGGEFTAEEAERWGL 169

Length = 248

>gnl|CDD|236162 PRK08138, PRK08138, enoyl-CoA hydratase; Provisional

 Score = 80.1 bits (198), Expect = 2e-17
 Identities = 66/230 (28%), Positives = 95/230 (41%), Gaps = 51/230 (22%)

Query: 29  TDDLCNQVLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86
                + VL+E  A+  +A+  LNRP A NALN  +  +L + F     DP+I  + + G
Sbjct: 2   MSTATDVVLLERPADG-VALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTG 60

Query: 87  SGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL---------KPHVAIL 137
             + F AG DI     F   G +E            +YL  T           KP +A +
Sbjct: 61  GEKVFAAGADIKE---FATAGAIE------------MYLRHTERYWEAIAQCPKPVIAAV 105

Query: 138 NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF----L 193
           NG  +GGG  +++     VA     F  PE  +G  P AG +     L   +G+F    +
Sbjct: 106 NGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGT---QRLVRAVGKFKAMRM 162

Query: 194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLE 243
           ALTG  +   E +A GL     VSE            V +D   +   LE
Sbjct: 163 ALTGCMVPAPEALAIGL-----VSE------------VVEDEQTLPRALE 195

Length = 261

>gnl|CDD|180335 PRK05980, PRK05980, enoyl-CoA hydratase; Provisional

 Score = 79.0 bits (195), Expect = 6e-17
 Identities = 63/214 (29%), Positives = 91/214 (42%), Gaps = 11/214 (5%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAG 94
           VL+E +    +  LNRP  LNALN  +  +L     A E D ++  V + G+G RAF AG
Sbjct: 5   VLIEIRDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAG 64

Query: 95  GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
            DI      +  G     +DF R   +    L    KP +A +NG+  GGG  ++     
Sbjct: 65  ADIHEFSASVAAGADVALRDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHL 124

Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG-----EFLALTGAKLNGAEMMACG 209
            +A  + +FA PE  +G  P  G +     LP   G     E L LTG   +    +  G
Sbjct: 125 AIASERALFAKPEIRLGMPPTFGGT---QRLPRLAGRKRALELL-LTGDAFSAERALEIG 180

Query: 210 LATH-YSVSEKLPLIEEELGKLVTDDPSVIEACL 242
           L        E LP       +++   P  + A L
Sbjct: 181 LVNAVVPHEELLPAARALARRIIRHSPVAVAAIL 214

Length = 260

>gnl|CDD|180295 PRK05862, PRK05862, enoyl-CoA hydratase; Provisional

 Score = 76.2 bits (188), Expect = 6e-16
 Identities = 61/202 (30%), Positives = 91/202 (45%), Gaps = 25/202 (12%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LVE +    +  LNRP ALNALN  +  +L     A++ D  IG + + GS +AF AG 
Sbjct: 6   ILVETRGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGA 65

Query: 96  DI--VSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           DI  ++   FM+  K     D+          +    KP +A + G  +GGG  +++   
Sbjct: 66  DIKEMADLSFMDVYK----GDYITNWEK----VARIRKPVIAAVAGYALGGGCELAMMCD 117

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF----LALTGAKLNGAEMMACG 209
             +A     F  PE  +G  P  G S     L   +G+     L LTG  ++ AE    G
Sbjct: 118 IIIAADTAKFGQPEIKLGVLPGMGGS---QRLTRAVGKAKAMDLCLTGRMMDAAEAERAG 174

Query: 210 LATHYSVSEKLP---LIEEELG 228
           L     VS  +P   L++E L 
Sbjct: 175 L-----VSRVVPADKLLDEALA 191

Length = 257

>gnl|CDD|205939 pfam13766, ECH_C, 2-enoyl-CoA Hydratase C-terminal region

 Score = 72.1 bits (178), Expect = 1e-15
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 4/59 (6%)

Query: 258 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
              + +D+CF  DTVEEI+ +LE++       W   TL+ L+  SPLSLKV+L  +R G
Sbjct: 3   EHREAIDRCFSGDTVEEILAALEADG----SEWAAKTLKTLRSGSPLSLKVTLEQLRRG 57

This is the C-terminal region of enoyl-CoA hydratase. Length = 117

>gnl|CDD|235664 PRK05995, PRK05995, enoyl-CoA hydratase; Provisional

 Score = 75.0 bits (185), Expect = 2e-15
 Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 4/196 (2%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP   NA N  + A+L   F+A + D ++  V + G+G+AFCAG D+  +   M    
Sbjct: 19  LNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKK-MAGYS 77

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            +E +   R L   +  +    KP +A ++G    GG G+       VA    VF   E 
Sbjct: 78  DDENRADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEV 137

Query: 169 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVS-EKL-PLIEEE 226
            +G  P   + + +  +         LT  + + AE +  GL  H  V  E L   ++E 
Sbjct: 138 RLGLIPATISPYVIRAMGERAARRYFLTAERFDAAEALRLGLV-HEVVPAEALDAKVDEL 196

Query: 227 LGKLVTDDPSVIEACL 242
           L  LV + P  + A  
Sbjct: 197 LAALVANSPQAVRAGK 212

Length = 262

>gnl|CDD|181069 PRK07657, PRK07657, enoyl-CoA hydratase; Provisional

 Score = 71.7 bits (176), Expect = 3e-14
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 8/189 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 107
           LNRP A NAL+  +  +L  +      + N+  V + G+G +AFCAG D+      MN+ 
Sbjct: 19  LNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAG-MNE- 76

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
             E+ +     + + + ++    +P +A +NG+ +GGG  +++   FR+A         E
Sbjct: 77  --EQVRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTE 134

Query: 168 TLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 225
           T +   P AG +  L  L   G   E L  TG +++  E    GL      +  L     
Sbjct: 135 TTLAIIPGAGGTQRLPRLIGVGRAKE-LIYTGRRISAQEAKEIGLVEFVVPAHLLEEKAI 193

Query: 226 ELGKLVTDD 234
           E+ + +  +
Sbjct: 194 EIAEKIASN 202

Length = 260

>gnl|CDD|180591 PRK06494, PRK06494, enoyl-CoA hydratase; Provisional

 Score = 70.8 bits (174), Expect = 5e-14
 Identities = 56/180 (31%), Positives = 79/180 (43%), Gaps = 15/180 (8%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAG 94
             VE K +  +  LNRP  +NAL+ +   +L ++F  +  DP      + G+G +AF AG
Sbjct: 6   STVERKGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAG 65

Query: 95  GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
            D   L      GK    +  F  L S   L     KP +A +NGV MGGG  +++    
Sbjct: 66  ND---LKEQAAGGKRGWPESGFGGLTSRFDL----DKPIIAAVNGVAMGGGFELALACDL 118

Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 210
            VA     FA PE  +G    AG       LP  +G   A    LTG ++   E +  G 
Sbjct: 119 IVAAENATFALPEPRVGLAALAGGLH---RLPRQIGLKRAMGMILTGRRVTAREGLELGF 175

Length = 259

>gnl|CDD|180472 PRK06210, PRK06210, enoyl-CoA hydratase; Provisional

 Score = 70.5 bits (173), Expect = 8e-14
 Identities = 57/192 (29%), Positives = 78/192 (40%), Gaps = 24/192 (12%)

Query: 35  QVLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFC 92
            VL E  A+S +A+  LNRP  LNA    M A++       E DP +  + + G+GR FC
Sbjct: 6   AVLYEV-ADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFC 64

Query: 93  AGGDIVSL----------YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142
           AG D+  L             +         D ++T Y F+  L    KP +A +NG   
Sbjct: 65  AGADMGELQTIDPSDGRRDTDVRPFVGNRRPD-YQTRYHFLTALR---KPVIAAINGACA 120

Query: 143 GGGAGVSIPGTFRVACGKTVFATPET---LIGFHPDAGASFYLSHLPGHLGEF-LALTGA 198
           G G   ++    R A     F T      LI  H   G S+ L  L GH     L L+  
Sbjct: 121 GIGLTHALMCDVRFAADGAKFTTAFARRGLIAEH---GISWILPRLVGHANALDLLLSAR 177

Query: 199 KLNGAEMMACGL 210
                E +  GL
Sbjct: 178 TFYAEEALRLGL 189

Length = 272

>gnl|CDD|180298 PRK05870, PRK05870, enoyl-CoA hydratase; Provisional

 Score = 69.4 bits (170), Expect = 1e-13
 Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 7/166 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           +N P   NA+   M A+L     A E DP++  + + G+G+AFCAG D+ +L      G+
Sbjct: 18  VNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTAL--GAAPGR 75

Query: 109 LEECKDFFRTLY-SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
             E  D  R +Y  F+ +    L P +A +NG  +G G  +++    R+A  K +F    
Sbjct: 76  PAE--DGLRRIYDGFLAVASCPL-PTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARF 132

Query: 168 TLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLAT 212
             +G HP  GA++ L    G  +     L G + +    +  GLA 
Sbjct: 133 QKLGLHPGGGATWMLQRAVGPQVARAALLFGMRFDAEAAVRHGLAL 178

Length = 249

>gnl|CDD|235733 PRK06190, PRK06190, enoyl-CoA hydratase; Provisional

 Score = 67.7 bits (166), Expect = 5e-13
 Identities = 55/219 (25%), Positives = 84/219 (38%), Gaps = 16/219 (7%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LVE     R   LNRP A NAL+  +   L       + D ++  V + G+  AFCAG 
Sbjct: 6   LLVETHDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGL 65

Query: 96  DIVSL----YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIP 151
           D+  L      +  Q  L                     KP +  +NG  + GG  +++ 
Sbjct: 66  DLKELGGDGSAYGAQDALPNP----------SPAWPAMRKPVIGAINGAAVTGGLELALA 115

Query: 152 GTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGL 210
               +A  +  FA     +G  P  G S  L    G      ++LTG  L+ A+ +  GL
Sbjct: 116 CDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRARRMSLTGDFLDAADALRAGL 175

Query: 211 ATH-YSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDL 248
            T      E LP        +  ++P+ + A    Y D 
Sbjct: 176 VTEVVPHDELLPRARRLAASIAGNNPAAVRALKASYDDG 214

Length = 258

>gnl|CDD|131333 TIGR02280, PaaB1, phenylacetate degradation probable enoyl-CoA hydratase paaB

 Score = 66.4 bits (162), Expect = 1e-12
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 5/164 (3%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP  LN+    M  +L +  +  E D +   + + G+GR FCAG D+         G 
Sbjct: 14  LNRPDKLNSFTAEMHLELREALERVERD-DARALMLTGAGRGFCAGQDLSERN--PTPGG 70

Query: 109 LEECKDFFRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
             +      T Y+  +  L     P V  +NGV  G GA +++     +A     F    
Sbjct: 71  APDLGRTIETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAF 130

Query: 168 TLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGL 210
             IG  PD+G ++ L  L G      LA+ G KL+     + GL
Sbjct: 131 AKIGLIPDSGGTWSLPRLVGRARAMGLAMLGEKLDARTAASWGL 174

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE). Length = 256

>gnl|CDD|178269 PLN02664, PLN02664, enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

 Score = 66.5 bits (162), Expect = 2e-12
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 14/176 (7%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
            LNRPS  NAL+ +   +  K   + + +PN+  + + G+G  FC+G D+ +L     Q 
Sbjct: 22  NLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQS 81

Query: 108 KL-------EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK 160
                    E  +   + L   I  +    KP +A ++G  +GGG  +      R     
Sbjct: 82  SSGDRGRSGERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSED 141

Query: 161 TVFATPETLIGFHPDAGASFYLSHLPGHLG----EFLALTGAKLNGAEMMACGLAT 212
             F+  E  +    D G    L  LP  +G      LALTG + +G+E    GL +
Sbjct: 142 AFFSVKEVDLAITADLGT---LQRLPSIVGYGNAMELALTGRRFSGSEAKELGLVS 194

Length = 275

>gnl|CDD|178210 PLN02600, PLN02600, enoyl-CoA hydratase

 Score = 66.0 bits (161), Expect = 2e-12
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 7/170 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQG 107
           L+RP A NA+   M   L   F+  + D +   V ++ S    FCAG D+      M+  
Sbjct: 10  LDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADL-KERRKMS-- 66

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
              E + F  +L S    L     P +A++ G  +GGG  +++    R+   + VF  PE
Sbjct: 67  -PSEVQKFVNSLRSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPE 125

Query: 168 TLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSV 216
           T +   P AG +  L  L G    + L  TG ++   E  + GL  +Y V
Sbjct: 126 TGLAIIPGAGGTQRLPRLVGRSRAKELIFTGRRIGAREAASMGLV-NYCV 174

Length = 251

>gnl|CDD|168351 PRK06023, PRK06023, enoyl-CoA hydratase; Provisional

 Score = 66.0 bits (161), Expect = 2e-12
 Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 11/215 (5%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
            NRP   NA+   M A + K  KA + D  I      G+   F AG D+         G 
Sbjct: 21  FNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAAMGGT 80

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
                 F   +  F+  L    KP V+ ++G+ +G G  + +      A  +++F TP  
Sbjct: 81  -----SFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFV 135

Query: 169 LIGFHPDAGASFYLSHLPGHLGEF--LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 226
            +   P+AG+S     L GH   F  LAL G   +       GL   + + ++   +E E
Sbjct: 136 DLALVPEAGSSLLAPRLMGHQRAFALLAL-GEGFSAEAAQEAGLI--WKIVDE-EAVEAE 191

Query: 227 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 261
             K   +  +     L+   DL+   +  ++ RID
Sbjct: 192 TLKAAEELAAKPPQALQIARDLMRGPREDILARID 226

Length = 251

>gnl|CDD|235705 PRK06127, PRK06127, enoyl-CoA hydratase; Provisional

 Score = 65.9 bits (161), Expect = 3e-12
 Identities = 53/257 (20%), Positives = 97/257 (37%), Gaps = 10/257 (3%)

Query: 24  TSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVS 83
           ++ S       ++L E          N P+  NA++ +M   L +   A E+D  I  V 
Sbjct: 1   STMSSISSPTGKLLAEKTGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVV 60

Query: 84  MKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVT 141
           + G+G +AF +G DI     F       E    +          L  + KP +A + G  
Sbjct: 61  LTGAGEKAFVSGADIS---QFEESRSDAEAVAAYEQAVEAAQAALADYAKPTIACIRGYC 117

Query: 142 MGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAK 199
           +GGG G+++    R+A   + F  P   +G          L  L  P    +    T  +
Sbjct: 118 IGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSAAKDLF-YTARR 176

Query: 200 LNGAEMMACGLATHYSVSEKL-PLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH 258
            + AE +  GL    + ++ L   + +    +  + P  + A     ++L+  +    + 
Sbjct: 177 FDAAEALRIGLVHRVTAADDLETALADYAATIAGNAPLTLRAAKRAIAELLKDEPERDMA 236

Query: 259 RID-IVDKCFGLDTVEE 274
               +V  CF  +   E
Sbjct: 237 ACQALVAACFDSEDYRE 253

Length = 269

>gnl|CDD|236073 PRK07659, PRK07659, enoyl-CoA hydratase; Provisional

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 5/165 (3%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
           +LNRP ALNAL+  M  +L +  K    + +   V ++G+GR F AGGDI  +   ++  
Sbjct: 20  MLNRPEALNALDEPMLKELLQALKEVA-ESSAHIVVLRGNGRGFSAGGDIKMM---LSSN 75

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
              +      T+   +  L T  K  ++ ++G   G G  +++   + +A      A   
Sbjct: 76  DESKFDGVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNF 135

Query: 168 TLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLA 211
             IG  PD G  F+L    G +  + +   G KL+  E +  GL 
Sbjct: 136 IGIGLIPDGGGHFFLQKRVGENKAKQIIWEGKKLSATEALDLGLI 180

Length = 260

>gnl|CDD|181009 PRK07511, PRK07511, enoyl-CoA hydratase; Provisional

 Score = 64.6 bits (158), Expect = 6e-12
 Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 4/164 (2%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+ P A NAL+ +M A   +     E DP+I  V + G+G  FCAGG++  L    N+ K
Sbjct: 18  LSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLE--NRAK 75

Query: 109 -LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
                      L+ +I  +    KP +A + G   G G  +++     VA     F    
Sbjct: 76  PPSVQAASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAY 135

Query: 168 TLIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGL 210
             +G  PD G S++L+  LP  L   L L G  ++   + A G+
Sbjct: 136 VKVGLTPDGGGSWFLARALPRQLATELLLEGKPISAERLHALGV 179

Length = 260

>gnl|CDD|181008 PRK07509, PRK07509, enoyl-CoA hydratase; Provisional

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 52/190 (27%), Positives = 70/190 (36%), Gaps = 38/190 (20%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP  +NAL+  M  +L    K  + D  I  V + G G AFCAG D+ S     +   
Sbjct: 18  LNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKS---VASSPG 74

Query: 109 LEECKDFFRTLYSFIYLLGTHLK------------------PHVAILNGVTMGGGAGVSI 150
                         + LL   L                   P +A L GV  GGG  +++
Sbjct: 75  NA------------VKLLFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIAL 122

Query: 151 PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMAC 208
               R+A   T  +  E   G  PD   +  L  L       E L  T    +  E +  
Sbjct: 123 GADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVRKDVARE-LTYTARVFSAEEALEL 181

Query: 209 GLATHYSVSE 218
           GL TH  VS+
Sbjct: 182 GLVTH--VSD 189

Length = 262

>gnl|CDD|182026 PRK09674, PRK09674, enoyl-CoA hydratase-isomerase; Provisional

 Score = 62.9 bits (153), Expect = 3e-11
 Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 7/175 (4%)

Query: 45  RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFM 104
            +  LNRP A NALN  +  +L    +A   D +IG   + G+ R F AG D+      M
Sbjct: 13  LLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNE----M 68

Query: 105 NQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 164
            +  L    +  R        L    KP +A +NG  +G G  +++     +A     F 
Sbjct: 69  AEKDLAATLNDPRPQL--WQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFG 126

Query: 165 TPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSE 218
            PE  +G  P AG +  L    G  L   + LTG  +   +    GL +     E
Sbjct: 127 LPEITLGIMPGAGGTQRLIRSVGKSLASQMVLTGESITAQQAQQAGLVSEVFPPE 181

Length = 255

>gnl|CDD|236206 PRK08260, PRK08260, enoyl-CoA hydratase; Provisional

 Score = 63.1 bits (154), Expect = 3e-11
 Identities = 47/161 (29%), Positives = 69/161 (42%), Gaps = 31/161 (19%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS--------- 99
           LNRP  LNA    M  +L + F A + D  +  V + G+GRAFCAG D+ +         
Sbjct: 19  LNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDA 78

Query: 100 ---LYHFMNQGKLEECKDFFR------TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSI 150
                    + + +   D  R      TL  F       LKP +A +NG  +G GA +++
Sbjct: 79  PRTPVEADEEDRADPSDDGVRDGGGRVTLRIF-----DSLKPVIAAVNGPAVGVGATMTL 133

Query: 151 PGTFRVACGKT----VFATPETLIGFHPDAGASFYLSHLPG 187
               R+A        VF       G  P+A +S++L  L G
Sbjct: 134 AMDIRLASTAARFGFVFGR----RGIVPEAASSWFLPRLVG 170

Length = 296

>gnl|CDD|235714 PRK06142, PRK06142, enoyl-CoA hydratase; Provisional

 Score = 60.8 bits (148), Expect = 1e-10
 Identities = 51/174 (29%), Positives = 77/174 (44%), Gaps = 16/174 (9%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ-- 106
           LNRP   NA+N    ++L ++F+  + DP +  V + GSG+ F  G D+ ++     Q  
Sbjct: 21  LNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLG 80

Query: 107 -----GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
                    + +     L + I  +    KP +A + G  +GGG  +      R A    
Sbjct: 81  KDGLARPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADA 140

Query: 162 VFATPETLIGFHPDAGASFYLSHLP-----GHLGEFLALTGAKLNGAEMMACGL 210
            F+  E  +G   D G+   L  LP     GHL E LALTG  ++ AE    GL
Sbjct: 141 KFSVREVDLGMVADVGS---LQRLPRIIGDGHLRE-LALTGRDIDAAEAEKIGL 190

Length = 272

>gnl|CDD|215480 PLN02888, PLN02888, enoyl-CoA hydratase

 Score = 59.0 bits (143), Expect = 6e-10
 Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)

Query: 31 DLCNQVLVEGKANSRMAI-LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR 89
             N +LV    N    I +NRP ALNAL   M  +L   FK  + D ++  + + GSGR
Sbjct: 6  VSENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGR 65

Query: 90 AFCAGGDI 97
          AFC+G D+
Sbjct: 66 AFCSGVDL 73

Length = 265

>gnl|CDD|181122 PRK07799, PRK07799, enoyl-CoA hydratase; Provisional

 Score = 58.6 bits (142), Expect = 6e-10
 Identities = 57/184 (30%), Positives = 82/184 (44%), Gaps = 14/184 (7%)

Query: 37  LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAW---ENDPNIGFVSMKGSGRAFCA 93
           LVE + ++ +  +NRP A NAL+T M   L  +  AW   +NDP+I    + G+G AFCA
Sbjct: 8   LVEQRGHTLIVTMNRPEARNALSTEM---LRIMVDAWDRVDNDPDIRSCILTGAGGAFCA 64

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTH--LKPHVAILNGVTMGGGAGVSIP 151
           G D+ +      +   +  KD          LL      KP +A + G  + GG  + + 
Sbjct: 65  GMDLKAA---TKKPPGDSFKDGSYDPSRIDALLKGRRLTKPLIAAVEGPAIAGGTEI-LQ 120

Query: 152 GT-FRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLNGAEMMACG 209
           GT  RVA     F   E      P  G++  L   +P  +   L LTG  +  AE    G
Sbjct: 121 GTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEIG 180

Query: 210 LATH 213
           L  H
Sbjct: 181 LIGH 184

Length = 263

>gnl|CDD|179599 PRK03580, PRK03580, carnitinyl-CoA dehydratase; Provisional

 Score = 58.2 bits (141), Expect = 1e-09
 Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 26/206 (12%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSL------ 100
            L+RP A NA++      + ++F  + +DP +    + G+G + F AG D+ +       
Sbjct: 17  TLDRPKA-NAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGEAP 75

Query: 101 ---YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVA 157
              +       L E  D                KP +A +NG   GGG  +++   F V 
Sbjct: 76  DADFGPGGFAGLTEIFDLD--------------KPVIAAVNGYAFGGGFELALAADFIVC 121

Query: 158 CGKTVFATPETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLNGAEMMACGLATHYSV 216
                FA PE  +G  PD+G    L   LP  +   + +TG +++  E +  G+      
Sbjct: 122 ADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIANEMVMTGRRMDAEEALRWGIVNRVVP 181

Query: 217 SEKLPLIEEELGKLVTDDPSVIEACL 242
             +L     EL + + +   +  A L
Sbjct: 182 QAELMDRARELAQQLVNSAPLAIAAL 207

Length = 261

>gnl|CDD|236163 PRK08140, PRK08140, enoyl-CoA hydratase; Provisional

 Score = 58.0 bits (141), Expect = 1e-09
 Identities = 50/166 (30%), Positives = 74/166 (44%), Gaps = 8/166 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP  LN+    M  +L +     E D     + + G+GR FCAG D+         G 
Sbjct: 19  LNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADR-DVTPGGA 76

Query: 109 LEECKDFFRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
           + +  +   T Y+  +  L     P +A +NGV  G GA +++     +A     F    
Sbjct: 77  MPDLGESIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAF 136

Query: 168 TLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGL 210
             IG  PD+G +++L  L G    LG  LAL G KL+  +    GL
Sbjct: 137 VKIGLVPDSGGTWFLPRLVGMARALG--LALLGEKLSAEQAEQWGL 180

Length = 262

>gnl|CDD|131494 TIGR02441, fa_ox_alpha_mit, fatty acid oxidation complex, alpha subunit, mitochondrial

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 14/162 (8%)

Query: 43  NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYH 102
           NS++  L++      L       +N+L   W N+     V + G   +F AG DI  +  
Sbjct: 32  NSKVNTLSK-----ELFAEFKEVMNEL---WTNEAIKSAVLISGKPGSFVAGADIQMI-- 81

Query: 103 FMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG--K 160
                  +E     +        +    KP VA ++G  +GGG  +++   +R+A    K
Sbjct: 82  -AACKTAQEVTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRK 140

Query: 161 TVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLN 201
           T+   PE ++G  P AG +  L  L G      + LTG K+ 
Sbjct: 141 TLLGLPEVMLGLLPGAGGTQRLPKLTGVPAALDMMLTGKKIR 182

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human , pig , and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16). Length = 737

>gnl|CDD|180910 PRK07260, PRK07260, enoyl-CoA hydratase; Provisional

 Score = 57.1 bits (138), Expect = 2e-09
 Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 1/182 (0%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP   N  N  M  ++ +  +  E DP++ F+ +  +G+ F  GGD+V +   +++  
Sbjct: 17  LNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDD 76

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
           ++        +    + +    KP +  ++G   G  A +++   F +A  KT F     
Sbjct: 77  VQSLVKIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFV 136

Query: 169 LIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 227
            +G  PDAG  F L+   G +    LA+TG  L   + +  G     + SEKL    E+L
Sbjct: 137 GVGLAPDAGGLFLLTRAIGLNRATHLAMTGEALTAEKALEYGFVYRVAESEKLEKTCEQL 196

Query: 228 GK 229
            K
Sbjct: 197 LK 198

Length = 255

>gnl|CDD|181070 PRK07658, PRK07658, enoyl-CoA hydratase; Provisional

 Score = 56.6 bits (137), Expect = 3e-09
 Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 32/210 (15%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LN P A NAL++ +  +L++L    E D N+  V + G GR F AG DI     F +  +
Sbjct: 17  LNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADI---KEFTSVTE 72

Query: 109 LEECKDFFRTLYSFIYLLGTHL--------KPHVAILNGVTMGGGAGVSIPGTFRVACGK 160
            E+         + +  LG           KP +A ++G  +GGG  +++    R A   
Sbjct: 73  AEQ--------ATELAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATES 124

Query: 161 TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATHYSV 216
                PE  +G  P    +     LP ++G+  A    LT   + GAE +  GL      
Sbjct: 125 AKLGLPELNLGLIPGFAGT---QRLPRYVGKAKALEMMLTSEPITGAEALKWGLVNG-VF 180

Query: 217 SEKLPLIEEEL---GKLVTDDPSVIEACLE 243
            E+  L+++      K+    P+   A LE
Sbjct: 181 PEE-TLLDDAKKLAKKIAGKSPATTRAVLE 209

Length = 257

>gnl|CDD|168168 PRK05674, PRK05674, gamma-carboxygeranoyl-CoA hydratase; Validated

 Score = 56.4 bits (136), Expect = 4e-09
 Identities = 48/201 (23%), Positives = 78/201 (38%), Gaps = 16/201 (7%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ-- 106
           L+R    NA N  M  +L       ++D ++ F+ ++G GR F AG D+     +M Q  
Sbjct: 21  LSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLA----WMQQSA 76

Query: 107 -----GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
                  L++     R L   +Y L     P +A++ G   GG  G+       +     
Sbjct: 77  DLDYNTNLDDA----RELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDA 132

Query: 162 VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGL-ATHYSVSEKL 220
            F   E  IG  P   + F +  +        ALT  + +G      GL A  Y  +E  
Sbjct: 133 QFCLSEVRIGLAPAVISPFVVKAIGERAARRYALTAERFDGRRARELGLLAESYPAAELE 192

Query: 221 PLIEEELGKLVTDDPSVIEAC 241
             +E  +  L+ + P  + A 
Sbjct: 193 AQVEAWIANLLLNSPQALRAS 213

Length = 265

>gnl|CDD|180424 PRK06144, PRK06144, enoyl-CoA hydratase; Provisional

 Score = 56.2 bits (136), Expect = 5e-09
 Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 24/177 (13%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQ 106
             NRP+A NA+   M   L ++ +A   DP+I  V ++G+G +AF AG DI     F   
Sbjct: 22  TFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAF--- 78

Query: 107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 166
              E+   + R +   +  L     P +A + G  +GGGA ++     R+       ATP
Sbjct: 79  STAEDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRI-------ATP 131

Query: 167 ETLIGFHPDA-------GASFYLSHLPGHLG----EFLALTGAKLNGAEMMACGLAT 212
               GF P A         S   + L   LG    + +  T   L   E +A GL  
Sbjct: 132 SARFGF-PIARTLGNCLSMSNL-ARLVALLGAARVKDMLFTARLLEAEEALAAGLVN 186

Length = 262

>gnl|CDD|236383 PRK09120, PRK09120, p-hydroxycinnamoyl CoA hydratase/lyase; Validated

 Score = 55.8 bits (135), Expect = 7e-09
 Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 12/199 (6%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP   NA++  +  ++  +  A E D + G + + G+G A+ AG D+   +   +   
Sbjct: 23  LNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQP 82

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
               +   R  Y +   L  + KP +A++NG   GGG    +     +A  +  F   E 
Sbjct: 83  EILQERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEI 142

Query: 169 LIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATHYSVSEKLPLIE--- 224
             G  P  G S  ++   GH    +  +TG    G +    GL     V+E +PL +   
Sbjct: 143 NWGIPPGGGVSKAMADTVGHRDALYYIMTGETFTGRKAAEMGL-----VNESVPLAQLRA 197

Query: 225 ---EELGKLVTDDPSVIEA 240
              E   KL+  +P V+ A
Sbjct: 198 RTRELAAKLLEKNPVVLRA 216

Length = 275

>gnl|CDD|168580 PRK06495, PRK06495, enoyl-CoA hydratase; Provisional

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 31  DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA 90
            + +Q+ +E   +  +  L+ P  +NAL+  +  +L  +F      P++  V + G+G+ 
Sbjct: 1   MMMSQLKLEVSDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKV 59

Query: 91  FCAGGDIVSLYHFMNQGKLEECKDFF---RTLYSFIYLLGTHLKPHVAILNGVTMGGGAG 147
           FCAG D+           ++   D     R      + +    KP +A +NG  +G G G
Sbjct: 60  FCAGADLKG-----RPDVIKGPGDLRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLG 114

Query: 148 VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMA 207
           +       VA    VF  PE  +G     G    +      L   + LTG ++  AE+  
Sbjct: 115 LVASCDIIVASENAVFGLPEIDVGLA--GGGKHAMRLFGHSLTRRMMLTGYRVPAAELYR 172

Query: 208 CGL 210
            G+
Sbjct: 173 RGV 175

Length = 257

>gnl|CDD|183548 PRK12478, PRK12478, enoyl-CoA hydratase; Provisional

 Score = 52.3 bits (125), Expect = 1e-07
 Identities = 49/205 (23%), Positives = 86/205 (41%), Gaps = 34/205 (16%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYH-----F 103
           LNRP  LN +   M  ++       E D +I  + ++G+GRAF  G D    +       
Sbjct: 20  LNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAM 79

Query: 104 MNQGKLEECKDFFRT-------LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRV 156
           M  G+ +  KDF             F+ +     KP +A ++G  +GG +  ++      
Sbjct: 80  MTDGRWDPGKDFAMVTARETGPTQKFMAIWRAS-KPVIAQVHGWCVGGASDYAL------ 132

Query: 157 ACGKTVFATPETLIGFHPDA---GA---SFYLSHLPGHLGEFLALTGAKLNGAEMMACGL 210
            C   V A+ + +IG  P +   GA     +L  L     ++ +LTG  L G +     L
Sbjct: 133 -CADIVIASDDAVIG-TPYSRMWGAYLTGMWLYRLSLAKVKWHSLTGRPLTGVQAAEAEL 190

Query: 211 ATHYSVSEKLPL--IEEELGKLVTD 233
                ++E +P   +E  + ++ T+
Sbjct: 191 -----INEAVPFERLEARVAEVATE 210

Length = 298

>gnl|CDD|181723 PRK09245, PRK09245, enoyl-CoA hydratase; Provisional

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 20/183 (10%)

Query: 49  LNRPSALNALNTN-MGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLY--HFMN 105
           +NRP   NAL+ N     L     A   D ++  V + G+G AF +GG++  +       
Sbjct: 18  MNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAF 77

Query: 106 QGKLEECKDFFRTLYSFIYLLGTHLK-PHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 164
            G   + +  +R     I L   +L+ P +A +NG  +G G  ++     R+A     FA
Sbjct: 78  GGSPADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFA 137

Query: 165 TPETLIGFHP-DAGASFYLSHLPGHLG-----EFLALTGAKLNGAEMMACGLATHYSVSE 218
                +G  P D GA      LP  +G     E +A TG  ++ A  +  GL     VS 
Sbjct: 138 ESFVKLGLIPGDGGAWL----LPRIIGMARAAE-MAFTGDAIDAATALEWGL-----VSR 187

Query: 219 KLP 221
            +P
Sbjct: 188 VVP 190

Length = 266

>gnl|CDD|181254 PRK08150, PRK08150, enoyl-CoA hydratase; Provisional

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 56/198 (28%), Positives = 77/198 (38%), Gaps = 26/198 (13%)

Query: 25  SSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSM 84
            S V+ +L   V   G        LNRP+  NALN  + A L   F        +  V +
Sbjct: 1   PSLVSYELDGGVATIG--------LNRPAKRNALNDGLIAALRAAFARLPEG--VRAVVL 50

Query: 85  KGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL----YSFIYLLGTHLKPHVAILNGV 140
            G G  FCAG D+  L        +   + + R      Y  +        P +A L+G 
Sbjct: 51  HGEGDHFCAGLDLSELRERDAGEGMHHSRRWHRVFDKIQYGRV--------PVIAALHGA 102

Query: 141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HLGEFLALTGA 198
            +GGG  ++     RVA   T FA PE   G     G S  +  L G   + + + LTG 
Sbjct: 103 VVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTD-MMLTGR 161

Query: 199 KLNGAEMMACGLATHYSV 216
             +  E    GLA  Y V
Sbjct: 162 VYDAQEGERLGLA-QYLV 178

Length = 255

>gnl|CDD|180987 PRK07468, PRK07468, enoyl-CoA hydratase; Provisional

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN--- 105
           LNRP   NAL+  M A+L    +    D  +  V + G+G++FCAGGD+  +   M    
Sbjct: 20  LNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTADR 79

Query: 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAG 147
             ++EE     R L   +  L    KP +  + G   GGG G
Sbjct: 80  ATRIEEA----RRLAMMLKALNDLPKPLIGRIQGQAFGGGVG 117

Length = 262

>gnl|CDD|181325 PRK08252, PRK08252, enoyl-CoA hydratase; Provisional

 Score = 48.4 bits (116), Expect = 1e-06
 Identities = 49/177 (27%), Positives = 69/177 (38%), Gaps = 9/177 (5%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           VLVE +    +  +NRP A NA+N  +   L       + DP++    + G+G  FCAG 
Sbjct: 5   VLVERRGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGM 64

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D   L  F  +G+        R             KP +A + G  + GG  +++     
Sbjct: 65  D---LKAFA-RGERPSIPG--RGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLI 116

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSH-LPGHLGEFLALTGAKLNGAEMMACGLA 211
           VA     F  PE   G     G    L   +P H+   LALTG  L        GL 
Sbjct: 117 VAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAMELALTGDMLTAERAHELGLV 173

Length = 254

>gnl|CDD|181249 PRK08139, PRK08139, enoyl-CoA hydratase; Validated

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 22/48 (45%), Positives = 28/48 (58%)

Query: 49 LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGD 96
          LNRP A NAL+  M A L     A   DP++  V +  +G+AFCAG D
Sbjct: 26 LNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHD 73

Length = 266

>gnl|CDD|181329 PRK08258, PRK08258, enoyl-CoA hydratase; Provisional

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 4/165 (2%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP   N L     A+L  LF+      ++  V + G+G  FC+GGD+  +   + +  
Sbjct: 32  LNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMD 91

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
           + E   F R     +  +    +P +A ++GV  G GA +++    R+       A   T
Sbjct: 92  MPELLAFTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFT 151

Query: 169 LIGFH-PDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGL 210
            +G    D GA   L  +   G   E L  TG  ++  E    G 
Sbjct: 152 RVGLAGADMGACALLPRIIGQGRASELL-YTGRSMSAEEGERWGF 195

Length = 277

>gnl|CDD|200143 TIGR01929, menB, naphthoate synthase (dihydroxynaphthoic acid synthetase)

 Score = 47.2 bits (112), Expect = 5e-06
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 12/103 (11%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGD--IVSLYHFM 104
            +NRP   NA       ++ +       DP+IG V + G+G +AFC+GGD  +   Y ++
Sbjct: 17  TINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYI 76

Query: 105 NQGKLEECK--DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGG 145
           +   +      D  R + +         KP +A++NG  +GGG
Sbjct: 77  DDSGVHRLNVLDVQRQIRTCP-------KPVIAMVNGYAIGGG 112

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]. Length = 259

>gnl|CDD|235661 PRK05981, PRK05981, enoyl-CoA hydratase; Provisional

 Score = 46.7 bits (111), Expect = 6e-06
 Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 20/174 (11%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPN-IGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
           L+ P  +NA++ +M   L +   A E+    +  + + G+GR FC G ++        QG
Sbjct: 19  LDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANL--------QG 70

Query: 108 KLEECKDF---------FRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVA 157
           +    ++            T Y  F+  L     P V  +NG   G G   ++ G   + 
Sbjct: 71  RGSGGRESDSGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILC 130

Query: 158 CGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGL 210
                F      IG  PD G+++ L  L G      L+L G KL     +  GL
Sbjct: 131 ARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKARAMELSLLGEKLPAETALQWGL 184

Length = 266

>gnl|CDD|132244 TIGR03200, dearomat_oah, 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

 Score = 46.8 bits (111), Expect = 7e-06
 Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 7/149 (4%)

Query: 37  LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGG 95
           +V G  N+ + IL+ P   N+  T+M   +   F+   +D ++  V     G +AFC GG
Sbjct: 32  VVPGLYNAWI-ILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGG 90

Query: 96  DIVSL--YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           +      Y+  N  +  +    F  + S I  LG   KP +  +NG+ +GGG  + +   
Sbjct: 91  NTKEYAEYYAGNPQEYRQYMRLFNDMVSAI--LGCD-KPVICRVNGMRIGGGQEIGMAAD 147

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYL 182
           F +A     F       G  P  GA+ +L
Sbjct: 148 FTIAQDLANFGQAGPKHGSAPIGGATDFL 176

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 360

>gnl|CDD|131490 TIGR02437, FadB, fatty oxidation complex, alpha subunit FadB

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 7/160 (4%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDI---VSLYHFM 104
             + P ++N  +    A L++   A +   ++  V +     AF  G DI   + L+  +
Sbjct: 21  KFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLF-AL 79

Query: 105 NQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 164
              +L +   F  ++++ +  L     P VA +NG+ +GGG    +   FR+A       
Sbjct: 80  PDAELIQWLLFANSIFNKLEDLPV---PTVAAINGIALGGGCECVLATDFRIADDTAKIG 136

Query: 165 TPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE 204
            PET +G  P  G +  L  + G       +   K N AE
Sbjct: 137 LPETKLGIMPGFGGTVRLPRVIGADNALEWIASGKENRAE 176

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399 [Fatty acid and phospholipid metabolism, Degradation]. Length = 714

>gnl|CDD|181174 PRK07938, PRK07938, enoyl-CoA hydratase; Provisional

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 59/212 (27%), Positives = 79/212 (37%), Gaps = 37/212 (17%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
            ++ P  +NAL +     L     A   DP+   V ++  GR F AG DI  L       
Sbjct: 16  TVDYPP-VNALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQATPGFT 74

Query: 108 KL----EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
            L      C   FR +Y           P +A ++G  +GGG G+       VA     F
Sbjct: 75  ALIDANRGCFAAFRAVYE-------CAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATF 127

Query: 164 ATPETLIGFHPDAGASFYLSHL----PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEK 219
             PE       D GA    +HL    P HL   L  T A +  AE+   G     SV E 
Sbjct: 128 GLPEV------DRGALGAATHLQRLVPQHLMRALFFTAATITAAELHHFG-----SVEEV 176

Query: 220 LPLIEEEL--------GKLVTDDPSVIEACLE 243
           +P   ++L         K+   D  VI A  E
Sbjct: 177 VP--RDQLDEAALEVARKIAAKDTRVIRAAKE 206

Length = 249

>gnl|CDD|236213 PRK08272, PRK08272, enoyl-CoA hydratase; Provisional

 Score = 45.8 bits (109), Expect = 1e-05
 Identities = 45/197 (22%), Positives = 71/197 (36%), Gaps = 47/197 (23%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
            LNRP   NA+  +   +L    +  + DP +  + + G+G+ FCAG D+ +     + G
Sbjct: 24  TLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSG 83

Query: 108 KLEECKDFFRTLYS----------------------FIYLLGTHLKPHVAILNGVTMGGG 145
                    R   +                      F+ L   H KP VA ++G  + GG
Sbjct: 84  GGGGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAH-KPTVAKVHGYCVAGG 142

Query: 146 AGVSIPGTFRVACGKTVFATPETLIGFH-------PDAGASFYLSHLPGHLG----EFLA 194
             +++           V A  +  IG+        P  G   Y       LG    + L 
Sbjct: 143 TDIAL-------HCDQVIAADDAKIGYPPTRVWGVPATGMWAY------RLGPQRAKRLL 189

Query: 195 LTGAKLNGAEMMACGLA 211
            TG  + GA+    GLA
Sbjct: 190 FTGDCITGAQAAEWGLA 206

Length = 302

>gnl|CDD|236109 PRK07827, PRK07827, enoyl-CoA hydratase; Provisional

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 48/167 (28%), Positives = 65/167 (38%), Gaps = 7/167 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+ P   NAL+  + A+L+   +A   DP +  V +  +G  FCAG D   L      G 
Sbjct: 21  LDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGAD---LSEAGGGGG 77

Query: 109 LEECKDFFRTLYSFIYLLGTHL---KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 165
                   R       LL   +   KP +A ++G    GG G+       VA  ++ FA 
Sbjct: 78  DPYDAAVARAR-EMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFAL 136

Query: 166 PETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLAT 212
            E  IG  P   +   L  L         LTG K   AE    GL T
Sbjct: 137 TEARIGVAPAIISLTLLPRLSPRAAARYYLTGEKFGAAEAARIGLVT 183

Length = 260

>gnl|CDD|235991 PRK07327, PRK07327, enoyl-CoA hydratase; Provisional

 Score = 44.2 bits (105), Expect = 4e-05
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 48 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGD 96
          +LN P ALNA +  M  +L  +++  + DP++  V ++G G+AF AGGD
Sbjct: 26 VLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGD 74

Length = 268

>gnl|CDD|236220 PRK08290, PRK08290, enoyl-CoA hydratase; Provisional

 Score = 43.4 bits (103), Expect = 9e-05
 Identities = 45/188 (23%), Positives = 67/188 (35%), Gaps = 29/188 (15%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS------LYH 102
           LNRP A NA N  M  +L+  F+  E D  +  + + G+G+ F AG D+ S         
Sbjct: 19  LNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDP 78

Query: 103 FMNQGKLEECKDFFRTLYSFIYLLGTHL------------KPHVAILNGVTMGGGAGVSI 150
             +Q          +      Y     +            KP +A + G  + GG  ++ 
Sbjct: 79  GPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAW 138

Query: 151 PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG-----EFLALTGAKLNGAEM 205
                VA     F+ P   +G         Y +H P  LG     E L  TG +L   E 
Sbjct: 139 VCDLIVASDDAFFSDPVVRMG----IPGVEYFAH-PWELGPRKAKELL-FTGDRLTADEA 192

Query: 206 MACGLATH 213
              G+   
Sbjct: 193 HRLGMVNR 200

Length = 288

>gnl|CDD|168278 PRK05864, PRK05864, enoyl-CoA hydratase; Provisional

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 3/118 (2%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP  +N++  ++   L +       D ++  V + G+GR F +G D  S     +   
Sbjct: 25  LNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEG 84

Query: 109 LEECKDFFRT---LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
           L       R+   L   I  L    +P +A +NG  +GGG  +++    RVA     F
Sbjct: 85  LTRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYF 142

Length = 276

>gnl|CDD|236205 PRK08259, PRK08259, enoyl-CoA hydratase; Provisional

 Score = 41.0 bits (97), Expect = 4e-04
 Identities = 22/63 (34%), Positives = 29/63 (46%)

Query: 34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
            V VE        ILNRP   NA++    A L   F+A++ D       + G+G  FCA
Sbjct: 3  MSVRVERNGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCA 62

Query: 94 GGD 96
          G D
Sbjct: 63 GAD 65

Length = 254

>gnl|CDD|178509 PLN02921, PLN02921, naphthoate synthase

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 4/71 (5%)

Query: 27  SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86
             TD +  + + EG A  ++ I NRP   NA       +L + F    +D ++G + + G
Sbjct: 63  EFTDIIYEKAVGEGIA--KITI-NRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTG 119

Query: 87  SG-RAFCAGGD 96
            G +AFC+GGD
Sbjct: 120 KGTKAFCSGGD 130

Length = 327

>gnl|CDD|132254 TIGR03210, badI, 2-ketocyclohexanecarboxyl-CoA hydrolase

 Score = 39.9 bits (93), Expect = 0.001
 Identities = 33/123 (26%), Positives = 51/123 (41%), Gaps = 18/123 (14%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQ 106
           ++NRP+ +NA       +L    K    D  IG + + G+G +AFC GGD  S +     
Sbjct: 16  MINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGD-QSTHDGGYD 74

Query: 107 GK------LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK 160
           G+      +EE     R +           KP +A + G  +GGG  +       +A  K
Sbjct: 75  GRGTIGLPMEELHSAIRDV----------PKPVIARVQGYAIGGGNVLVTICDLTIASEK 124

Query: 161 TVF 163
             F
Sbjct: 125 AQF 127

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen. Length = 256

>gnl|CDD|132233 TIGR03189, dienoyl_CoA_hyt, cyclohexa-1,5-dienecarbonyl-CoA hydratase

 Score = 38.4 bits (89), Expect = 0.003
 Identities = 36/164 (21%), Positives = 60/164 (36%), Gaps = 8/164 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L RP A N ++  M A L+        D  +  V +   G  F  G  +        +  
Sbjct: 16  LARPKA-NIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASV-------AEHM 67

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            ++C     +L+  +  +     P +  + G  +GGG  V+  G    A        PE 
Sbjct: 68  PDQCAAMLASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEI 127

Query: 169 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLAT 212
           ++G    A +      +     E L  +G  ++GAE    GLA 
Sbjct: 128 VLGVFAPAASCLLPERMGRVAAEDLLYSGRSIDGAEGARIGLAN 171

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation. Length = 251

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	350
KOG1684	401	consensus Enoyl-CoA hydratase [Lipid transport and	100.0
PLN02851	407	3-hydroxyisobutyryl-CoA hydrolase-like protein	100.0
PLN02157	401	3-hydroxyisobutyryl-CoA hydrolase-like protein	100.0
PLN02988	381	3-hydroxyisobutyryl-CoA hydrolase	100.0
PLN02874	379	3-hydroxyisobutyryl-CoA hydrolase-like protein	100.0
PRK05617	342	3-hydroxyisobutyryl-CoA hydrolase; Provisional	100.0
PRK05980	260	enoyl-CoA hydratase; Provisional	100.0
PRK09076	258	enoyl-CoA hydratase; Provisional	100.0
PRK09120	275	p-hydroxycinnamoyl CoA hydratase/lyase; Validated	100.0
PRK06127	269	enoyl-CoA hydratase; Provisional	100.0
PRK08150	255	enoyl-CoA hydratase; Provisional	100.0
PRK07327	268	enoyl-CoA hydratase; Provisional	100.0
PRK06142	272	enoyl-CoA hydratase; Provisional	100.0
PRK05862	257	enoyl-CoA hydratase; Provisional	100.0
TIGR03210	256	badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Memb	100.0
PRK07657	260	enoyl-CoA hydratase; Provisional	100.0
PRK09674	255	enoyl-CoA hydratase-isomerase; Provisional	100.0
PRK09245	266	enoyl-CoA hydratase; Provisional	100.0
PRK05809	260	3-hydroxybutyryl-CoA dehydratase; Validated	100.0
PLN02664	275	enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA	100.0
PRK07511	260	enoyl-CoA hydratase; Provisional	100.0
TIGR02280	256	PaaB1 phenylacetate degradation probable enoyl-CoA	100.0
PRK07658	257	enoyl-CoA hydratase; Provisional	100.0
PRK08139	266	enoyl-CoA hydratase; Validated	100.0
PRK07799	263	enoyl-CoA hydratase; Provisional	100.0
PRK08258	277	enoyl-CoA hydratase; Provisional	100.0
PRK08140	262	enoyl-CoA hydratase; Provisional	100.0
PRK06563	255	enoyl-CoA hydratase; Provisional	100.0
PRK06144	262	enoyl-CoA hydratase; Provisional	100.0
TIGR01929	259	menB naphthoate synthase (dihydroxynaphthoic acid	100.0
PRK07260	255	enoyl-CoA hydratase; Provisional	100.0
PRK08252	254	enoyl-CoA hydratase; Provisional	100.0
PRK07468	262	enoyl-CoA hydratase; Provisional	100.0
PRK08138	261	enoyl-CoA hydratase; Provisional	100.0
PLN02600	251	enoyl-CoA hydratase	100.0
PRK05981	266	enoyl-CoA hydratase; Provisional	100.0
PRK05995	262	enoyl-CoA hydratase; Provisional	100.0
KOG1680	290	consensus Enoyl-CoA hydratase [Lipid transport and	100.0
COG1024	257	CaiD Enoyl-CoA hydratase/carnithine racemase [Lipi	100.0
PRK06143	256	enoyl-CoA hydratase; Provisional	100.0
PRK05674	265	gamma-carboxygeranoyl-CoA hydratase; Validated	100.0
PRK07659	260	enoyl-CoA hydratase; Provisional	100.0
PRK06494	259	enoyl-CoA hydratase; Provisional	100.0
PRK05864	276	enoyl-CoA hydratase; Provisional	100.0
PRK08260	296	enoyl-CoA hydratase; Provisional	100.0
PRK06688	259	enoyl-CoA hydratase; Provisional	100.0
PRK03580	261	carnitinyl-CoA dehydratase; Provisional	100.0
PRK07509	262	enoyl-CoA hydratase; Provisional	100.0
PRK06023	251	enoyl-CoA hydratase; Provisional	100.0
PLN02888	265	enoyl-CoA hydratase	100.0
PRK07396	273	dihydroxynaphthoic acid synthetase; Validated	100.0
PRK05870	249	enoyl-CoA hydratase; Provisional	100.0
PRK06210	272	enoyl-CoA hydratase; Provisional	100.0
PRK11423	261	methylmalonyl-CoA decarboxylase; Provisional	100.0
PRK08259	254	enoyl-CoA hydratase; Provisional	100.0
PRK06072	248	enoyl-CoA hydratase; Provisional	100.0
PRK06495	257	enoyl-CoA hydratase; Provisional	100.0
TIGR03189	251	dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hy	100.0
PRK07854	243	enoyl-CoA hydratase; Provisional	100.0
PRK07827	260	enoyl-CoA hydratase; Provisional	100.0
PLN02921	327	naphthoate synthase	100.0
PF00378	245	ECH: Enoyl-CoA hydratase/isomerase family; InterPr	100.0
PRK08321	302	naphthoate synthase; Validated	100.0
PRK07110	249	polyketide biosynthesis enoyl-CoA hydratase; Valid	100.0
PRK06190	258	enoyl-CoA hydratase; Provisional	100.0
PRK07938	249	enoyl-CoA hydratase; Provisional	100.0
PLN03214	278	probable enoyl-CoA hydratase/isomerase; Provisiona	100.0
PRK07112	255	polyketide biosynthesis enoyl-CoA hydratase; Valid	100.0
PRK12478	298	enoyl-CoA hydratase; Provisional	100.0
PRK05869	222	enoyl-CoA hydratase; Validated	100.0
PRK08788	287	enoyl-CoA hydratase; Validated	100.0
PRK08290	288	enoyl-CoA hydratase; Provisional	100.0
PRK11730	715	fadB multifunctional fatty acid oxidation complex	100.0
PRK08272	302	enoyl-CoA hydratase; Provisional	100.0
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	100.0
TIGR02437	714	FadB fatty oxidation complex, alpha subunit FadB.	100.0
TIGR02441	737	fa_ox_alpha_mit fatty acid oxidation complex, alph	100.0
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	100.0
TIGR03200	360	dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hy	100.0
PRK06213	229	enoyl-CoA hydratase; Provisional	100.0
KOG1679	291	consensus Enoyl-CoA hydratase [Lipid transport and	100.0
TIGR02440	699	FadJ fatty oxidation complex, alpha subunit FadJ.	100.0
PRK11154	708	fadJ multifunctional fatty acid oxidation complex	100.0
PLN02267	239	enoyl-CoA hydratase/isomerase family protein	100.0
KOG1681	292	consensus Enoyl-CoA isomerase [Lipid transport and	100.0
cd06558	195	crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hy	100.0
TIGR03222	546	benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the p	100.0
COG0447	282	MenB Dihydroxynaphthoic acid synthase [Coenzyme me	100.0
PRK08184	550	benzoyl-CoA-dihydrodiol lyase; Provisional	100.0
KOG0016	266	consensus Enoyl-CoA hydratase/isomerase [Lipid tra	100.0
KOG1682	287	consensus Enoyl-CoA isomerase [Lipid transport and	100.0
cd07014	177	S49_SppA Signal peptide peptidase A. Signal peptid	99.78
cd07020	187	Clp_protease_NfeD_1 Nodulation formation efficienc	99.76
cd07019	211	S49_SppA_1 Signal peptide peptidase A (SppA), a se	99.62
PF13766	118	ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PD	99.54
cd00394	161	Clp_protease_like Caseinolytic protease (ClpP) is	99.52
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	99.49
cd07022	214	S49_Sppa_36K_type Signal peptide peptidase A (SppA	99.48
cd07016	160	S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-	99.44
cd07023	208	S49_Sppa_N_C Signal peptide peptidase A (SppA), a	99.4
TIGR00706	207	SppA_dom signal peptide peptidase SppA, 36K type.	99.33
cd07018	222	S49_SppA_67K_type Signal peptide peptidase A (SppA	99.19
cd07021	178	Clp_protease_NfeD_like Nodulation formation effici	99.16
cd07015	172	Clp_protease_NfeD Nodulation formation efficiency	98.6
cd07013	162	S14_ClpP Caseinolytic protease (ClpP) is an ATP-de	98.55
PRK10949	618	protease 4; Provisional	98.52
PRK00277	200	clpP ATP-dependent Clp protease proteolytic subuni	98.47
KOG1683	380	consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA	98.44
PRK12319	256	acetyl-CoA carboxylase subunit alpha; Provisional	98.27
COG0616	317	SppA Periplasmic serine proteases (ClpP class) [Po	98.25
PRK12553	207	ATP-dependent Clp protease proteolytic subunit; Re	98.24
cd07017	171	S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-	98.23
PRK14512	197	ATP-dependent Clp protease proteolytic subunit; Pr	98.16
CHL00198	322	accA acetyl-CoA carboxylase carboxyltransferase al	98.1
PF00574	182	CLP_protease: Clp protease; InterPro: IPR001907 In	98.06
TIGR00513	316	accA acetyl-CoA carboxylase, carboxyl transferase,	98.03
PRK05724	319	acetyl-CoA carboxylase carboxyltransferase subunit	97.98
TIGR00493	191	clpP ATP-dependent Clp protease, proteolytic subun	97.96
PRK11778	330	putative inner membrane peptidase; Provisional	97.96
CHL00028	200	clpP ATP-dependent Clp protease proteolytic subuni	97.94
PLN03230	431	acetyl-coenzyme A carboxylase carboxyl transferase	97.93
PLN03229	762	acetyl-coenzyme A carboxylase carboxyl transferase	97.92
TIGR03134	238	malonate_gamma malonate decarboxylase, gamma subun	97.81
TIGR03133	274	malonate_beta malonate decarboxylase, beta subunit	97.74
PRK12551	196	ATP-dependent Clp protease proteolytic subunit; Re	97.73
PRK14514	221	ATP-dependent Clp protease proteolytic subunit; Pr	97.66
PRK14513	201	ATP-dependent Clp protease proteolytic subunit; Pr	97.6
TIGR00705	584	SppA_67K signal peptide peptidase SppA, 67K type.	97.56
PRK07189	301	malonate decarboxylase subunit beta; Reviewed	97.5
PF01972	285	SDH_sah: Serine dehydrogenase proteinase; InterPro	97.49
PRK05654	292	acetyl-CoA carboxylase subunit beta; Validated	97.41
PF01343	154	Peptidase_S49: Peptidase family S49 peptidase clas	97.23
COG0740	200	ClpP Protease subunit of ATP-dependent Clp proteas	97.19
PRK12552	222	ATP-dependent Clp protease-like protein; Reviewed	97.12
TIGR00515	285	accD acetyl-CoA carboxylase, carboxyl transferase,	97.11
TIGR01117	512	mmdA methylmalonyl-CoA decarboxylase alpha subunit	97.04
CHL00174	296	accD acetyl-CoA carboxylase beta subunit; Reviewed	96.9
PF01039	493	Carboxyl_trans: Carboxyl transferase domain; Inter	96.84
PRK10949	618	protease 4; Provisional	96.76
PLN02820	569	3-methylcrotonyl-CoA carboxylase, beta chain	96.22
COG1030	436	NfeD Membrane-bound serine protease (ClpP class) [	96.15
TIGR01117	512	mmdA methylmalonyl-CoA decarboxylase alpha subunit	96.13
COG4799	526	Acetyl-CoA carboxylase, carboxyltransferase compon	96.12
PF01039	493	Carboxyl_trans: Carboxyl transferase domain; Inter	95.05
COG0825	317	AccA Acetyl-CoA carboxylase alpha subunit [Lipid m	94.89
COG0777	294	AccD Acetyl-CoA carboxylase beta subunit [Lipid me	94.13
PLN02820	569	3-methylcrotonyl-CoA carboxylase, beta chain	93.0
PRK08252	254	enoyl-CoA hydratase; Provisional	90.28
PRK07658	257	enoyl-CoA hydratase; Provisional	90.12
PRK05809	260	3-hydroxybutyryl-CoA dehydratase; Validated	89.99
PRK09674	255	enoyl-CoA hydratase-isomerase; Provisional	89.41
COG4799	526	Acetyl-CoA carboxylase, carboxyltransferase compon	89.02
PRK06495	257	enoyl-CoA hydratase; Provisional	88.59
PRK09076	258	enoyl-CoA hydratase; Provisional	88.5
PLN02600	251	enoyl-CoA hydratase	88.21
PRK07799	263	enoyl-CoA hydratase; Provisional	87.94
PRK05980	260	enoyl-CoA hydratase; Provisional	87.1
PRK06688	259	enoyl-CoA hydratase; Provisional	87.07
PRK08139	266	enoyl-CoA hydratase; Validated	86.7
PRK05862	257	enoyl-CoA hydratase; Provisional	86.22
PLN02664	275	enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA	86.16
PRK08150	255	enoyl-CoA hydratase; Provisional	85.54
KOG0840	275	consensus ATP-dependent Clp protease, proteolytic	85.49
TIGR02280	256	PaaB1 phenylacetate degradation probable enoyl-CoA	85.1
PRK06494	259	enoyl-CoA hydratase; Provisional	85.02
PRK07657	260	enoyl-CoA hydratase; Provisional	84.62
PRK07938	249	enoyl-CoA hydratase; Provisional	84.58
PRK07659	260	enoyl-CoA hydratase; Provisional	84.45
PRK08258	277	enoyl-CoA hydratase; Provisional	83.82
PRK07511	260	enoyl-CoA hydratase; Provisional	83.62
PRK07509	262	enoyl-CoA hydratase; Provisional	83.41
PRK06072	248	enoyl-CoA hydratase; Provisional	83.15
PRK06142	272	enoyl-CoA hydratase; Provisional	83.12
PRK06143	256	enoyl-CoA hydratase; Provisional	82.98
PRK06563	255	enoyl-CoA hydratase; Provisional	82.87
PRK08138	261	enoyl-CoA hydratase; Provisional	82.51
PRK08140	262	enoyl-CoA hydratase; Provisional	81.89
PRK07110	249	polyketide biosynthesis enoyl-CoA hydratase; Valid	81.39
PRK06210	272	enoyl-CoA hydratase; Provisional	80.83
PRK07827	260	enoyl-CoA hydratase; Provisional	80.14

>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=100.00  E-value=3e-69  Score=494.58  Aligned_cols=314  Identities=48%  Similarity=0.757  Sum_probs=289.3

Q ss_pred             CcccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhh
Q 018834           27 SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMN  105 (350)
Q Consensus        27 ~~~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~  105 (350)
                      ....+..+.|+++.++..++||||||+++||||.+|+..+...|..|+.++.+++||+.|++ ++||||+|++.......
T Consensus        31 ~~~~~~~~~VL~e~~~~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~~  110 (401)
T KOG1684|consen   31 SVSTDSKDQVLVEGKGCARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESIK  110 (401)
T ss_pred             ccccccCCceEEecCCceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHhh
Confidence            34455567899999999999999999999999999999999999999999999999999995 99999999998888877


Q ss_pred             cCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhc
Q 018834          106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL  185 (350)
Q Consensus       106 ~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl  185 (350)
                      ++.......||+.+|.+++.|.+|.||+||+|||++||||++|+++..||||||++.|+|||+.||+|||+|++|+|+|+
T Consensus       111 d~~~~~~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrl  190 (401)
T KOG1684|consen  111 DKETPEVKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRL  190 (401)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhC
Confidence            88888899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHH-HhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHH
Q 018834          186 PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD  264 (350)
Q Consensus       186 ~g~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~-~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~  264 (350)
                      +|..|.|++|||.++++.||+..||++|+||+++|+.++++|. .+...+...+...++.|.....+.........+.|+
T Consensus       191 pg~lg~YLgLTG~rl~GaD~~~~GlATHyv~S~~l~~Lee~L~~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~  270 (401)
T KOG1684|consen  191 PGYLGLYLGLTGQRLSGADALRCGLATHYVPSEKLPSLEERLLKNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVIN  270 (401)
T ss_pred             ccHHHHhhhhccceecchHHHHhcchhhccchhhhhHHHHHHhhhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHH
Confidence            9988999999999999999999999999999999999999997 444555588999999998876554445555789999


Q ss_pred             HhcCcCCHHHHHHHHhccC-CCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccC
Q 018834          265 KCFGLDTVEEIIDSLESEA-SLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHG  343 (350)
Q Consensus       265 ~~f~~~~~~ei~~~lek~~-~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~  343 (350)
                      .||+.+++|||++.|++.. .+..++||+++++.+.+.||+||++|+++++++..   +++++||.+|||+....+.++|
T Consensus       271 ~~Fs~~tVeeIie~lk~~q~~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs~---~tl~~~l~~Eyr~s~~~~~~~D  347 (401)
T KOG1684|consen  271 KCFSANTVEEIIEALKNYQQSADGSEWAKETLKTLKKMSPTSLKVTLRQIREGSK---QTLDQCLTMEYRLSLRMLMRGD  347 (401)
T ss_pred             HhhccccHHHHHHHHHHHhhhhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHhhccc
Confidence            9999999999999885432 34568999999999999999999999999999999   9999999999999999988887

>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=100.00  E-value=1.7e-67  Score=508.86  Aligned_cols=320  Identities=63%  Similarity=1.052  Sum_probs=281.8

Q ss_pred             cccccccccccCCCCCCcccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCc
Q 018834           11 RYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA   90 (350)
Q Consensus        11 ~~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~   90 (350)
                      |+|++|+-.....       ...+.|+++..+++++||||||+++|+||.+|+.+|.++|+.|+.|++|++|||+|+|++
T Consensus        26 ~~~~~~~~~~~~~-------~~~~~v~~e~~~~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~Gka   98 (407)
T PLN02851         26 RSFSALPNYAAND-------DLQDQVLVEGRAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSGRA   98 (407)
T ss_pred             cccccCCcccccC-------CCCCCeEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCC
Confidence            4555555433332       345578999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccc
Q 018834           91 FCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI  170 (350)
Q Consensus        91 F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~i  170 (350)
                      ||+|+|++++++....+..+....+|+.+|.+++.|.++|||+||+|||+|||||++|+++||||||+++++|+|||+++
T Consensus        99 FcAGgDl~~l~~~~~~~~~~~~~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~i  178 (407)
T PLN02851         99 FCSGADVVSLYHLINEGNVEECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQM  178 (407)
T ss_pred             ccCCcCHHHHHhhccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhcc
Confidence            99999999987643333334567788999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCC
Q 018834          171 GFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY  250 (350)
Q Consensus       171 Gl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~  250 (350)
                      |++|++|++|+|+|++|..|.||+|||++++|+||+++||+|++||+++++.+.+.+.++...++..+...++.+.....
T Consensus       179 Gl~PdvG~s~~L~rl~g~~g~~L~LTG~~i~a~eA~~~GLa~~~v~~~~l~~l~~~l~~~~~~~~~~~~~~l~~~~~~~~  258 (407)
T PLN02851        179 GFHPDAGASYYLSRLPGYLGEYLALTGQKLNGVEMIACGLATHYCLNARLPLIEERLGKLLTDDPAVIEDSLAQYGDLVY  258 (407)
T ss_pred             CCCCCccHHHHHHHhcCHHHHHHHHhCCcCCHHHHHHCCCceeecCHhhHHHHHHHHHhhccCCHHHHHHHHHHhccccC
Confidence            99999999999999999889999999999999999999999999999999888888888877778888888887764321


Q ss_pred             CCcchHHHHHHHHHHhcCcCCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHH
Q 018834          251 PDKNSVIHRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKV  330 (350)
Q Consensus       251 ~~~~~~~~~~~~i~~~f~~~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~  330 (350)
                      +...........|++||+.+++++|++.|+.......++|++++++.|+++||+|+++|++++++++.   +|++|||++
T Consensus       259 ~~~~~~~~~~~~I~~~F~~~sv~~I~~~L~~~~~~~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~~---~sl~e~l~~  335 (407)
T PLN02851        259 PDKSSVLHKIETIDKCFGHDTVEEIIEALENEAASSYDEWCKKALKKIKEASPLSLKVTLQSIREGRF---QTLDQCLAR  335 (407)
T ss_pred             CCcccHHHHHHHHHHHhCCCCHHHHHHHHHhcccccchHHHHHHHHHHHhcCcHHHHHHHHHHHHHhc---CCHHHHHHH
Confidence            22233455688999999999999999999875333347899999999999999999999999999999   999999999


Q ss_pred             HHHHHhhhhh
Q 018834          331 ESTKFGTSVR  340 (350)
Q Consensus       331 E~~~~~~~~~  340 (350)
                      |+++...++.
T Consensus       336 E~~l~~~~~~  345 (407)
T PLN02851        336 EYRISLCGVS  345 (407)
T ss_pred             HHHHHHHHHh
Confidence            9999999874

>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=100.00  E-value=1.4e-66  Score=502.83  Aligned_cols=305  Identities=68%  Similarity=1.077  Sum_probs=273.4

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      .+.|+++++++|++||||||+++|+||.+|+.+|.++|+.|+.|++|++|||+|.|++||||+|+++++.....+.....
T Consensus        36 ~~~V~~e~~g~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~GkaFcAGgDl~~l~~~~~~~~~~~~  115 (401)
T PLN02157         36 DYQVLVEGSGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSGRAFCAGGDIVSLYHLRKRGSPDAI  115 (401)
T ss_pred             CCceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCccCCcCHHHHHhhccccchHHH
Confidence            45688999999999999999999999999999999999999999999999999999999999999998754322222334


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF  192 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~  192 (350)
                      ..++..+|.+++.|.++|||+||+|||+|||||++|+++||+|||+++++|+|||+++|++|++|++++|+|++|..++|
T Consensus       116 ~~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G~~a~~  195 (401)
T PLN02157        116 REFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPGRLGEY  195 (401)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhhHHHHH
Confidence            56778888899999999999999999999999999999999999999999999999999999999999999999977999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCCH
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV  272 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~  272 (350)
                      |+|||++++|+||+++||||++||+++++++.+.+.+++..++.++...|+.+.....+.......+...++.||+.+++
T Consensus       196 L~LTG~~i~A~eA~~~GLv~~vVp~~~l~~~~~~~~~i~~~~p~av~~~k~~~~~~~~~~~~~l~~~~~~i~~~f~~~d~  275 (401)
T PLN02157        196 LGLTGLKLSGAEMLACGLATHYIRSEEIPVMEEQLKKLLTDDPSVVESCLEKCAEVAHPEKTGVIRRIDLLEKCFSHDTV  275 (401)
T ss_pred             HHHcCCcCCHHHHHHcCCceEEeCHhHHHHHHHHHHHHHcCCHHHHHHHHHHHhcccCCcchhHHHHHHHHHHHhcCCCH
Confidence            99999999999999999999999999998777777888888999999999988765222223344457889999999999


Q ss_pred             HHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhh
Q 018834          273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVR  340 (350)
Q Consensus       273 ~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~  340 (350)
                      ++++++|+....+..++|++++++.|+++||+|+++|+++++++++   +|++|||++||++...+++
T Consensus       276 ~ei~~al~~~~~kr~~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~~---~~l~e~~~~e~~~~~~~~~  340 (401)
T PLN02157        276 EEIIDSLEIEAGRRKDTWCITTLRRLKESSPLSLKVALRSIREGRL---QTLDQCLIREYRMSLQGLI  340 (401)
T ss_pred             HHHHHHHHhhhcccchHHHHHHHHHHHhcCcHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHHh
Confidence            9999999653222357899999999999999999999999999999   9999999999999999986

>PLN02988 3-hydroxyisobutyryl-CoA hydrolase

Probab=100.00  E-value=2.6e-66  Score=499.40  Aligned_cols=303  Identities=48%  Similarity=0.807  Sum_probs=272.5

Q ss_pred             cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834           35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD  114 (350)
Q Consensus        35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~  114 (350)
                      .|.++.+++|++||||||+++|+||.+|+.+|.++|+.|+.|++|++|||+|.|++||+|+|++++++....+.......
T Consensus        10 ~v~~~~~~~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G~~FcAGgDl~~l~~~~~~~~~~~~~~   89 (381)
T PLN02988         10 QVLVEEKSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHGRAFCAGGDVAAVVRDIEQGNWRLGAN   89 (381)
T ss_pred             ceEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCcccCcCHHHHHhhhcccchhHHHH
Confidence            58888999999999999999999999999999999999999999999999999999999999999864322222233456


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHh
Q 018834          115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA  194 (350)
Q Consensus       115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~  194 (350)
                      +|+.+|.+++.|.++|||+||++||+|||||++|+++||||||+++++|+|||+++|++|++|++++|+|++|..++||+
T Consensus        90 ~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~~~~~l~  169 (381)
T PLN02988         90 FFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGFFGEYVG  169 (381)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHHHHHHHH
Confidence            77788888889999999999999999999999999999999999999999999999999999999999999998899999


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCCHHH
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE  274 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e  274 (350)
                      |||++++|.||+++||||++||++++++....+++++..++..+...++.+.................|++||+.+++++
T Consensus       170 LTG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~la~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~f~~~~~~~  249 (381)
T PLN02988        170 LTGARLDGAEMLACGLATHFVPSTRLTALEADLCRIGSNDPTFASTILDAYTQHPRLKPQSAYHRLDVIDRCFSRRTVEE  249 (381)
T ss_pred             HcCCCCCHHHHHHcCCceEecCHhHHHHHHHHHHHhhccCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHHHhCCCCHHH
Confidence            99999999999999999999999999988888888888888889999998875432122344456889999999999999


Q ss_pred             HHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhh
Q 018834          275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVR  340 (350)
Q Consensus       275 i~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~  340 (350)
                      |++.|+....+..++|++++++.++++||+|+++|+++++++++   +|++|||++|+++...+++
T Consensus       250 i~~~L~~~~~~~~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~~---~sl~e~~~~e~~~~~~~~~  312 (381)
T PLN02988        250 IISALEREATQEADGWISATIQALKKASPASLKISLRSIREGRL---QGVGQCLIREYRMVCHVMK  312 (381)
T ss_pred             HHHHHHhhccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHh
Confidence            99999974322257999999999999999999999999999999   9999999999999999998

>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein

Probab=100.00  E-value=1.7e-58  Score=446.70  Aligned_cols=308  Identities=43%  Similarity=0.719  Sum_probs=269.8

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      +.++.+.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++......  ..
T Consensus         8 ~~~~~v~~~~~~~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~--~~   85 (379)
T PLN02874          8 PAEEVVLGEEKGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAGRAFSAGGDLKMFYDGRES--DD   85 (379)
T ss_pred             CCCCceEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCccCHHHHHhhccc--ch
Confidence            3456788999999999999999999999999999999999999999999999999999999999999988642111  12


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHH
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG  190 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a  190 (350)
                      ....++...+.+...|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus        86 ~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g~~a  165 (379)
T PLN02874         86 SCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPGHLG  165 (379)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhHHHH
Confidence            22345556667788899999999999999999999999999999999999999999999999999999999999999779


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLD  270 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~  270 (350)
                      ++|+|||++++|+||+++|||+++||++++.++.+.+.++...+...+...++.+.................|.+||+.+
T Consensus       166 ~~l~ltG~~i~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~f~~~  245 (379)
T PLN02874        166 EYLALTGARLNGKEMVACGLATHFVPSEKLPELEKRLLNLNSGDESAVQEAIEEFSKDVQADEDSILNKQSWINECFSKD  245 (379)
T ss_pred             HHHHHcCCcccHHHHHHcCCccEEeCHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhcccCCCcchhHHHHHHHHHHhCCC
Confidence            99999999999999999999999999998888777777776666777777777665432233334455588999999999


Q ss_pred             CHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhh---ccC
Q 018834          271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVR---RHG  343 (350)
Q Consensus       271 ~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~---~~~  343 (350)
                      ++.++++.+++..++..++|+.++++.|.++||+|+++|+++++++..   .+++++|++|++++..++.   ++|
T Consensus       246 ~~~eii~al~~~~~~~~~~~A~~~a~~l~~~sP~al~~tk~~~~~~~~---~~l~~~l~~e~~~~~~~~~~~~~~D  318 (379)
T PLN02874        246 TVEEIIKAFESEASKTGNEWIKETLKGLRRSSPTGLKITLRSIREGRK---QSLAECLKKEFRLTMNILRSTVSDD  318 (379)
T ss_pred             CHHHHHHHHhhcccccccHHHHHHHHHHHhcChHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHhcCcCcc
Confidence            999999999887666678999999999999999999999999999998   8999999999999988887   665

>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional

Probab=100.00  E-value=6.8e-55  Score=416.85  Aligned_cols=302  Identities=36%  Similarity=0.615  Sum_probs=261.0

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      +.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++.+..........
T Consensus         3 ~~v~~~~~~~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~~   82 (342)
T PRK05617          3 DEVLAEVEGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAARAGDPLAA   82 (342)
T ss_pred             ceEEEEEECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhccCCchhH
Confidence            3588999999999999999999999999999999999999999999999999999 999999999998653211111112


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF  192 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~  192 (350)
                      ..+++..++++..+..+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+++
T Consensus        83 ~~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g~~a~~  162 (342)
T PRK05617         83 DRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPGALGTY  162 (342)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhcccHHHHH
Confidence            24555566788889999999999999999999999999999999999999999999999999999999999998866999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhc-cCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCC
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV-TDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT  271 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~  271 (350)
                      |+|||++++|+||+++|||++++|++++....+.+.++- ..+.+.+...++.+...  .....+......|++||+..+
T Consensus       163 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~  240 (342)
T PRK05617        163 LALTGARISAADALYAGLADHFVPSADLPALLDALISLRWDSGADVVDAALAAFATP--APASELAAQRAWIDECFAGDT  240 (342)
T ss_pred             HHHcCCCCCHHHHHHcCCcceecCHHHHHHHHHHHHhcCCccchhHHHHHHHHhccC--CCcchhHHHHHHHHHHhCCCC
Confidence            999999999999999999999999988876655554332 23344555566655443  223356667899999999999


Q ss_pred             HHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       272 ~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +++|+++|++.    .++|+.++++++.++||.+++.++++++++..   .++++++++|++++..++.++|.
T Consensus       241 ~~~~~~~l~~~----~~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~d~  306 (342)
T PRK05617        241 VEDIIAALEAD----GGEFAAKTADTLRSRSPTSLKVTLEQLRRARG---LTLEECLRRELRLALAMLRSPDF  306 (342)
T ss_pred             HHHHHHHHHhc----cHHHHHHHHHHHHhCCcHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHhCCch
Confidence            99999999987    46899999999999999999999999999988   89999999999999999988874

>PRK05980 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.5e-50  Score=374.33  Aligned_cols=252  Identities=25%  Similarity=0.361  Sum_probs=213.8

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      +.|.++.+++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++............
T Consensus         3 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~~~~~~~~   82 (260)
T PRK05980          3 DTVLIEIRDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVAAGADVAL   82 (260)
T ss_pred             ceEEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhccccchhhH
Confidence            3688999999999999999999999999999999999999999999999999999 799999999987543111122223


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+++..+.++..|..+|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        83 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~  162 (260)
T PRK05980         83 RDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRKRAL  162 (260)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHHHHH
Confidence            45556666788889999999999999999999999999999999999999999999999999999999999999998 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f-~  268 (350)
                      +|++||++++|+||+++||||+++|++++.+.... +.+++..+|.++..+|+.++........ ....+...+..+| +
T Consensus       163 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~  242 (260)
T PRK05980        163 ELLLTGDAFSAERALEIGLVNAVVPHEELLPAARALARRIIRHSPVAVAAILTAVTRGLNLSIAEGLLIESEQFARMAGS  242 (260)
T ss_pred             HHHHcCCccCHHHHHHcCCCCcccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999887765444 4678889999999999988765433222 2233456677777 4


Q ss_pred             cCCHHHHHHHHhccCCC
Q 018834          269 LDTVEEIIDSLESEASL  285 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~  285 (350)
                      .+..+.+.++++|++|.
T Consensus       243 ~~~~e~~~af~~kr~p~  259 (260)
T PRK05980        243 ADLREGLAAWIERRRPA  259 (260)
T ss_pred             hhHHHHHHHHhccCCCC
Confidence            56677777888888664

>PRK09076 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1e-49  Score=368.27  Aligned_cols=250  Identities=21%  Similarity=0.279  Sum_probs=212.2

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +..+.++++++|++||||||++ |++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++...    +...
T Consensus         2 ~~~v~~~~~~~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~----~~~~   76 (258)
T PRK09076          2 MIELDLEIDGHVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADG----DKAV   76 (258)
T ss_pred             ceEEEEEEECCEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhc----Chhh
Confidence            4468899999999999999986 999999999999999999999999999999998 799999999987532    1122


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...+......++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus        77 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a  156 (258)
T PRK09076         77 AREMARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEGWA  156 (258)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence            233444456678889999999999999999999999999999999999999999999999999999999999999998 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~  268 (350)
                      ++|++||++++|+||+++|||++++|++++.+.... +.+++..+|.++..+|+.++......... ...+...+..++.
T Consensus       157 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~  236 (258)
T PRK09076        157 KRMILCGERVDAATALRIGLVEEVVEKGEAREAALALAQKVANQSPSAVAACKTLIQAARNGPRAAALALERELFVDLFD  236 (258)
T ss_pred             HHHHHcCCcCCHHHHHHCCCCceecCchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999887654444 46888999999999999987654332222 2234566777785


Q ss_pred             -cCCHHHHHHHHhccCCCCC
Q 018834          269 -LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       269 -~~~~~ei~~~lek~~~~~~  287 (350)
                       .+..+.+.++++|++|.|.
T Consensus       237 ~~~~~eg~~af~~kr~p~~~  256 (258)
T PRK09076        237 TEDQREGVNAFLEKRAPQWK  256 (258)
T ss_pred             CchHHHHHHHHhcCCCCCCC
Confidence             5666677788899887654

>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated

Probab=100.00  E-value=1.1e-49  Score=371.05  Aligned_cols=253  Identities=21%  Similarity=0.304  Sum_probs=211.4

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ..++.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++..........
T Consensus         5 ~~~~~i~~~~~~~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~   84 (275)
T PRK09120          5 NRWDTVKVEVEDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAGDAWSAGMDLKEYFRETDAQPEI   84 (275)
T ss_pred             cccccEEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCceecCcCHHHHhhccccchhH
Confidence            34667999999999999999999999999999999999999999999999999999999999999999875421111111


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....+.+..+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. 
T Consensus        85 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~  164 (275)
T PRK09120         85 LQERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGHRD  164 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCHHH
Confidence            1223334456778889999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHH-H--HHHHH
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR-I--DIVDK  265 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~--~~i~~  265 (350)
                      +++|++||++++|+||+++|||+++||++++++.+..+ .+++..+|.++..+|+.++............. .  .....
T Consensus       165 a~~llltg~~~~A~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~  244 (275)
T PRK09120        165 ALYYIMTGETFTGRKAAEMGLVNESVPLAQLRARTRELAAKLLEKNPVVLRAAKDGFKRVRELTWDQAEDYLYAKLEQAN  244 (275)
T ss_pred             HHHHHhcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999988655444 67889999999999999986544332222221 1  22344


Q ss_pred             hcCc--CCHHHHHHHHhccC
Q 018834          266 CFGL--DTVEEIIDSLESEA  283 (350)
Q Consensus       266 ~f~~--~~~~ei~~~lek~~  283 (350)
                      +|..  +..+++.++++|+.
T Consensus       245 ~~~~~~d~~eg~~afl~kr~  264 (275)
T PRK09120        245 SLDPEGGREEGLKQFLDDKS  264 (275)
T ss_pred             hhCCHHHHHHHHHHHHhccc
Confidence            5644  46788888888874

>PRK06127 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.7e-49  Score=368.86  Aligned_cols=254  Identities=21%  Similarity=0.333  Sum_probs=216.5

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      +.+.|.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++....  ...+
T Consensus         9 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~--~~~~   86 (269)
T PRK06127          9 PTGKLLAEKTGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR--SDAE   86 (269)
T ss_pred             CCCceEEEEECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc--cchH
Confidence            345689999999999999999999999999999999999999999999999999998 8999999999875421  1222


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....++...+.++..|..+||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. 
T Consensus        87 ~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~  166 (269)
T PRK06127         87 AVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGPSA  166 (269)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCHHH
Confidence            2344555566788889999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f  267 (350)
                      +++|++||++++|+||+++||||++||++++.+...++ .+++..+|.++..+|+.++......... ...+...+..+|
T Consensus       167 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~  246 (269)
T PRK06127        167 AKDLFYTARRFDAAEALRIGLVHRVTAADDLETALADYAATIAGNAPLTLRAAKRAIAELLKDEPERDMAACQALVAACF  246 (269)
T ss_pred             HHHHHHcCCCCCHHHHHHcCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999998887655554 6788889999999999998754433222 233456777787


Q ss_pred             C-cCCHHHHHHHHhccCCCCC
Q 018834          268 G-LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       268 ~-~~~~~ei~~~lek~~~~~~  287 (350)
                      . .+..+.+.+|++|+.|.+.
T Consensus       247 ~~~d~~e~~~af~ekr~p~~~  267 (269)
T PRK06127        247 DSEDYREGRAAFMEKRKPVFK  267 (269)
T ss_pred             cChHHHHHHHHHhcCCCCCCC
Confidence            5 5666667788899877653

>PRK08150 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.7e-49  Score=365.99  Aligned_cols=249  Identities=24%  Similarity=0.239  Sum_probs=211.0

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +.|.++++++|++||||||++.|+||.+|+.+|.++++.++  +++++|||||.|++||+|+|++++...    ......
T Consensus         2 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g~~F~aG~Dl~~~~~~----~~~~~~   75 (255)
T PRK08150          2 SLVSYELDGGVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEGDHFCAGLDLSELRER----DAGEGM   75 (255)
T ss_pred             ceEEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCCCceecCcCHHHHhhc----cchhHH
Confidence            46788999999999999999999999999999999999987  789999999999999999999987532    111222


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .++...+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +++
T Consensus        76 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~~  155 (255)
T PRK08150         76 HHSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVARMTD  155 (255)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHH
Confidence            3345556778889999999999999999999999999999999999999999999999999999999999999988 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhcC-c
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFG-L  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f~-~  269 (350)
                      |++||++++|+||+++||||++||++++.+.. +.+.+++..+|.++..+|+.++........... .+......+|. .
T Consensus       156 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~  235 (255)
T PRK08150        156 MMLTGRVYDAQEGERLGLAQYLVPAGEALDKAMELARRIAQNAPLTNFAVLNALPRIADMSADDGLFVESLMAAVAQSAP  235 (255)
T ss_pred             HHHcCCcCCHHHHHHcCCccEeeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCH
Confidence            99999999999999999999999998877644 444688889999999999998765333222222 23445566674 5


Q ss_pred             CCHHHHHHHHhccCCCCCc
Q 018834          270 DTVEEIIDSLESEASLIND  288 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~~  288 (350)
                      +..+++.++++|++|.+++
T Consensus       236 d~~eg~~af~~kr~p~~~~  254 (255)
T PRK08150        236 EAKERLRAFLEKKAAKVKP  254 (255)
T ss_pred             HHHHHHHHHhccCCCCCCC
Confidence            6777788889999887753

>PRK07327 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.9e-49  Score=368.29  Aligned_cols=255  Identities=19%  Similarity=0.261  Sum_probs=211.9

Q ss_pred             CCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           32 LCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        32 ~~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      .++.+.+++ +++|++||||||+++|++|.+|+.+|.++|+.++.|++|++|||||.|++||+|+|++++.+.  .....
T Consensus         9 ~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~--~~~~~   86 (268)
T PRK07327          9 DYPALRFDRPPPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEGKAFSAGGDLALVEEM--ADDFE   86 (268)
T ss_pred             CCCeEEEEecCCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCCCCcccccCHHHHhhc--cCcHH
Confidence            456788988 588999999999999999999999999999999999999999999999999999999987542  11222


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....++...+.++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. 
T Consensus        87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~  166 (268)
T PRK07327         87 VRARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGMAK  166 (268)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCHHH
Confidence            2334555567788889999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-  267 (350)
                      +++|++||++++|+||+++|||++++|++++.+... .+++++..++.++..+|+.++................-...+ 
T Consensus       167 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~  246 (268)
T PRK07327        167 AKYYLLLCEPVSGEEAERIGLVSLAVDDDELLPKALEVAERLAAGSQTAIRWTKYALNNWLRMAGPTFDTSLALEFMGFS  246 (268)
T ss_pred             HHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHcc
Confidence            999999999999999999999999999988876544 446888999999999999987532111111111122222355 


Q ss_pred             CcCCHHHHHHHHhccCCCCCc
Q 018834          268 GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~~  288 (350)
                      +.+..+.+.++++|++|.+.+
T Consensus       247 ~~d~~eg~~af~ekr~p~~~~  267 (268)
T PRK07327        247 GPDVREGLASLREKRAPDFPG  267 (268)
T ss_pred             ChhHHHHHHHHHhcCCCCCCC
Confidence            456677788888998887643

>PRK06142 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.6e-49  Score=369.85  Aligned_cols=254  Identities=21%  Similarity=0.268  Sum_probs=213.2

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhh-------c
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-------Q  106 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-------~  106 (350)
                      +.+.++++++|++||||||+++|++|.+|+.+|.+++++++.|++|++|||+|.|++||+|+|++++.....       .
T Consensus         6 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~~~   85 (272)
T PRK06142          6 ESFTVELADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSGKHFSYGIDLPAMAGVFGQLGKDGLA   85 (272)
T ss_pred             ceEEEEecCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhhhcccccccccc
Confidence            468999999999999999999999999999999999999999999999999999999999999998754210       0


Q ss_pred             CChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhcc
Q 018834          107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP  186 (350)
Q Consensus       107 ~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~  186 (350)
                      ........+.....+++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~  165 (272)
T PRK06142         86 RPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLPRII  165 (272)
T ss_pred             cchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHHHHh
Confidence            11122333444556778889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHH-HHHHhhcCCCCCHHHHHHCCCCccccCC-CChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHH
Q 018834          187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDI  262 (350)
Q Consensus       187 g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~-~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~  262 (350)
                      |.. +++|++||++++|+||+++||||+++|+ +++.+... .+.+++..+|.++...|+.++......... .......
T Consensus       166 G~~~a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~l~~~~~~~~~~  245 (272)
T PRK06142        166 GDGHLRELALTGRDIDAAEAEKIGLVNRVYDDADALLAAAHATAREIAAKSPLAVRGTKEVLDYMRDHRVADGLRYVATW  245 (272)
T ss_pred             CHHHHHHHHHhCCCcCHHHHHHcCCccEecCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Confidence            988 9999999999999999999999999996 67765444 446888899999999999998653332222 2223456


Q ss_pred             HHHhc-CcCCHHHHHHHHhccCCCCC
Q 018834          263 VDKCF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       263 i~~~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      ...+| +.+..+++.++++++.|+|.
T Consensus       246 ~~~~~~~~d~~egv~af~~kr~p~~~  271 (272)
T PRK06142        246 NAAMLPSKDLTEAIAAHMEKRPPEFT  271 (272)
T ss_pred             HHHHhcCccHHHHHHHHhcCCCCCCC
Confidence            66677 46677778888898877653

>PRK05862 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2e-49  Score=366.16  Aligned_cols=248  Identities=23%  Similarity=0.332  Sum_probs=210.3

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.|+.||+|+|++++...   ...   .
T Consensus         4 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~---~   77 (257)
T PRK05862          4 ETILVETRGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSEKAFAAGADIKEMADL---SFM---D   77 (257)
T ss_pred             ceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCceECCcChHhHhcc---chh---H
Confidence            4588899999999999999999999999999999999999999999999999999999999999987532   111   1


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .+......++..|.++||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +.+
T Consensus        78 ~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~  157 (257)
T PRK05862         78 VYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGKAKAMD  157 (257)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence            1223334466789999999999999999999999999999999999999999999999999999999999999988 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhc-Cc
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCF-GL  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f-~~  269 (350)
                      |++||+.++|+||+++||||+++|++++.+.+..+ .+++..++.++..+|+.++........ ....+...+..++ +.
T Consensus       158 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~  237 (257)
T PRK05862        158 LCLTGRMMDAAEAERAGLVSRVVPADKLLDEALAAATTIASFSLPAVMMAKEAVNRAYETTLAEGLLFERRLFHSLFATE  237 (257)
T ss_pred             HHHhCCccCHHHHHHcCCCCEeeCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCh
Confidence            99999999999999999999999998877654444 678888999999999999865433322 2233455666677 45


Q ss_pred             CCHHHHHHHHhccCCCCC
Q 018834          270 DTVEEIIDSLESEASLIN  287 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~  287 (350)
                      +..+.+.++++|++|.+.
T Consensus       238 ~~~e~i~af~~kr~p~~~  255 (257)
T PRK05862        238 DQKEGMAAFVEKRKPVFK  255 (257)
T ss_pred             hHHHHHHHHhccCCCCCC
Confidence            677778888899877653

>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase

Probab=100.00  E-value=2.8e-49  Score=364.89  Aligned_cols=248  Identities=17%  Similarity=0.233  Sum_probs=207.9

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      +.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++...  ....   
T Consensus         2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~--~~~~---   76 (256)
T TIGR03210         2 EDILYEKRNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGG--YDGR---   76 (256)
T ss_pred             CceEEEeeCCEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcc--ccch---
Confidence            4688999999999999999999999999999999999999999999999999998 799999999987421  1111   


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+......++..|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus        77 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~~A~  156 (256)
T TIGR03210        77 GTIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEKKAR  156 (256)
T ss_pred             hHHHHHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHHHHH
Confidence            11223345677889999999999999999999999999999999999999999999999998888899999999998 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcC-c
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-L  269 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~-~  269 (350)
                      +|++||++++|+||+++||||+++|++++.+.... +.+++..+|.++..+|+.++............+...+..+|. .
T Consensus       157 ~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~  236 (256)
T TIGR03210       157 EIWYLCRRYTAQEALAMGLVNAVVPHDQLDAEVQKWCDEIVEKSPTAIAIAKRSFNMDTAHQRGIAGMGMYALKLYYDTA  236 (256)
T ss_pred             HHHHhCCCcCHHHHHHcCCceeeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHccCh
Confidence            99999999999999999999999999888765444 468889999999999999876432211111112345666774 5


Q ss_pred             CCHHHHHHHHhccCCCC
Q 018834          270 DTVEEIIDSLESEASLI  286 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~  286 (350)
                      +..+++.++++|++|.+
T Consensus       237 d~~e~~~af~~kr~p~~  253 (256)
T TIGR03210       237 ESREGVKAFQEKRKPEF  253 (256)
T ss_pred             hHHHHHHHHhccCCCCC
Confidence            67777888889987764

Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.

>PRK07657 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.1e-49  Score=364.72  Aligned_cols=250  Identities=22%  Similarity=0.347  Sum_probs=214.3

Q ss_pred             CcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834           34 NQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        34 ~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +.|.+++ +++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++...    ....
T Consensus         3 ~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~----~~~~   78 (260)
T PRK07657          3 QNISVDYVTPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM----NEEQ   78 (260)
T ss_pred             ceEEEEEccCCEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcC----Chhh
Confidence            5788886 789999999999999999999999999999999999999999999999 699999999987532    1223


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...++...+.++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus        79 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a  158 (260)
T PRK07657         79 VRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGRA  158 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHHHH
Confidence            344556667788889999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-  267 (350)
                      .+|++||++++|+||+++||||+++|++++.+....+ .+++..++.++..+|+.++......... ...+...+..++ 
T Consensus       159 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~  238 (260)
T PRK07657        159 KELIYTGRRISAQEAKEIGLVEFVVPAHLLEEKAIEIAEKIASNGPIAVRQAKEAISNGIQVDLHTGLQIEKQAYEGTIP  238 (260)
T ss_pred             HHHHHhCCCCCHHHHHHcCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999998887655444 6788899999999999998654333222 223455666777 


Q ss_pred             CcCCHHHHHHHHhccCCCCC
Q 018834          268 GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~  287 (350)
                      +.+..+.+.+++++++|.+.
T Consensus       239 ~~~~~e~~~af~~~r~~~~~  258 (260)
T PRK07657        239 TKDRLEGLQAFKEKRKPMYK  258 (260)
T ss_pred             CHhHHHHHHHHhcCCCCCCC
Confidence            45677777788899877653

>PRK09674 enoyl-CoA hydratase-isomerase; Provisional

Probab=100.00  E-value=3.1e-49  Score=364.43  Aligned_cols=248  Identities=22%  Similarity=0.280  Sum_probs=210.3

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +.|.++++++|++||||||+++|++|.+|+.+|.++++.++.|++||+|||+|.|++||+|+|++++...   ...   .
T Consensus         2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~---~   75 (255)
T PRK09674          2 SELLVSRQQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNARFFAAGADLNEMAEK---DLA---A   75 (255)
T ss_pred             ceEEEEeECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecccChHhHhcc---chh---h
Confidence            4678899999999999999999999999999999999999999999999999999999999999987531   111   1


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +++
T Consensus        76 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~~a~~  155 (255)
T PRK09674         76 TLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASQ  155 (255)
T ss_pred             hHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence            1222334567788999999999999999999999999999999999999999999999999999999999999988 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-c
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-L  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~  269 (350)
                      |+++|+.++|+||+++||||+++|++++.+ +.+.+.+++..+|.++..+|+.++......... ...+...+..++. .
T Consensus       156 l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~  235 (255)
T PRK09674        156 MVLTGESITAQQAQQAGLVSEVFPPELTLERALQLASKIARHSPLALRAAKQALRQSQEVDLQAGLAQERQLFTLLAATE  235 (255)
T ss_pred             HHHcCCccCHHHHHHcCCCcEecChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCH
Confidence            999999999999999999999999988765 455557888999999999999987654333222 2234556667775 5


Q ss_pred             CCHHHHHHHHhccCCCCC
Q 018834          270 DTVEEIIDSLESEASLIN  287 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~  287 (350)
                      +..+.+.++++|++|.+.
T Consensus       236 ~~~e~i~af~~kr~p~~~  253 (255)
T PRK09674        236 DRHEGISAFLEKRTPDFK  253 (255)
T ss_pred             HHHHHHHHHhccCCCCCC
Confidence            666667788888877653

>PRK09245 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.2e-49  Score=365.89  Aligned_cols=254  Identities=19%  Similarity=0.281  Sum_probs=211.2

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhc--CCh
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNT-NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ--GKL  109 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~-~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~--~~~  109 (350)
                      .+.+.++++++|++||||||+++|++|. +|+.+|.++++.++.|++|++|||+|.|++||+|+|++++.+....  +..
T Consensus         2 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~   81 (266)
T PRK09245          2 TDFLLVERDGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAGTAFSSGGNVKDMRARVGAFGGSP   81 (266)
T ss_pred             CCceEEEEECCEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCHHHHhhccccccccc
Confidence            3468999999999999999999999995 9999999999999999999999999999999999999988542110  111


Q ss_pred             HHH-HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834          110 EEC-KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       110 ~~~-~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      ... ..+......++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~  161 (266)
T PRK09245         82 ADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGM  161 (266)
T ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhH
Confidence            111 1222334567788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHH
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDK  265 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~  265 (350)
                      . +++|++||++++|+||+++||||+++|++++.+... .+.+++..++.++..+|+.++.......... ..+...+..
T Consensus       162 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~  241 (266)
T PRK09245        162 ARAAEMAFTGDAIDAATALEWGLVSRVVPADQLLPAARALAERIAANPPHALRLTKRLLREGQHASLDTLLELSAAYQAL  241 (266)
T ss_pred             HHHHHHHHcCCCcCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence            8 999999999999999999999999999988776444 4468899999999999999986533222222 223455666


Q ss_pred             hc-CcCCHHHHHHHHhccCCCC
Q 018834          266 CF-GLDTVEEIIDSLESEASLI  286 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~  286 (350)
                      ++ +.+..+++.++++|+.|.+
T Consensus       242 ~~~~~d~~eg~~af~~kr~p~~  263 (266)
T PRK09245        242 AHHTADHREAVDAFLEKRPPVF  263 (266)
T ss_pred             HhcCHhHHHHHHHHHcCCCCCC
Confidence            66 4566777778889987765

>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated

Probab=100.00  E-value=5.3e-49  Score=364.08  Aligned_cols=251  Identities=27%  Similarity=0.406  Sum_probs=213.7

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +..+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| +.||+|+|++++...    ....
T Consensus         3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~----~~~~   78 (260)
T PRK05809          3 LKNVILEKEGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDL----NEEE   78 (260)
T ss_pred             cceEEEEEeCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhcc----ChHH
Confidence            34688999999999999999999999999999999999999999999999999999 999999999987542    1122


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...+......++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +
T Consensus        79 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a  158 (260)
T PRK05809         79 GRKFGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVGPGKA  158 (260)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence            233444455678889999999999999999999999999999999999999999999999999999999999999987 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFG  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~  268 (350)
                      ++|++||+.++|+||+++||||+++|++++.+.. +.+.+++..+|.++..+|+.++.......... ..+...+..++.
T Consensus       159 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~  238 (260)
T PRK05809        159 KELIYTGDMINAEEALRIGLVNKVVEPEKLMEEAKALANKIAANAPIAVKLCKDAINRGMQVDIDTAVAIEAEDFGECFS  238 (260)
T ss_pred             HHHHHhCCCCCHHHHHHcCCCCcccChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999988876544 44468889999999999999986543332222 234566777774


Q ss_pred             -cCCHHHHHHHHhccCCCCC
Q 018834          269 -LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       269 -~~~~~ei~~~lek~~~~~~  287 (350)
                       .+..+.+.++++|++|.+.
T Consensus       239 ~~~~~egi~af~~~r~p~~~  258 (260)
T PRK05809        239 TEDQTEGMTAFVEKREKNFK  258 (260)
T ss_pred             CHHHHHHHHHHhcCCCCCCC
Confidence             5667778888899877653

>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

Probab=100.00  E-value=3.8e-49  Score=367.61  Aligned_cols=252  Identities=21%  Similarity=0.270  Sum_probs=209.9

Q ss_pred             cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhc---CC---
Q 018834           35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ---GK---  108 (350)
Q Consensus        35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~---~~---  108 (350)
                      .+..+.+++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++......   ..   
T Consensus         9 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~~   88 (275)
T PLN02664          9 IIQKSPNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAGDHFCSGIDLKTLNSISEQSSSGDRGR   88 (275)
T ss_pred             EEEecCCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCceeeCcChHHhhhcccccccccchh
Confidence            355566899999999999999999999999999999999999999999999999999999999987542110   01   


Q ss_pred             -hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH
Q 018834          109 -LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG  187 (350)
Q Consensus       109 -~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g  187 (350)
                       ......++....+++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|
T Consensus        89 ~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG  168 (275)
T PLN02664         89 SGERLRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVG  168 (275)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhC
Confidence             1122333444556778899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HH-HHHHhhcCCCCCHHHHHHCCCCccccCC-CChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHH
Q 018834          188 HL-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIV  263 (350)
Q Consensus       188 ~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~-~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i  263 (350)
                      .. +++|++||++++|+||+++||||++||+ +++++.... ..+++..+|.++..+|+.++........... .+...+
T Consensus       169 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~~~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~  248 (275)
T PLN02664        169 YGNAMELALTGRRFSGSEAKELGLVSRVFGSKEDLDEGVRLIAEGIAAKSPLAVTGTKAVLLRSRELSVEQGLDYVATWN  248 (275)
T ss_pred             HHHHHHHHHhCCCCCHHHHHHcCCCceeeCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            88 9999999999999999999999999995 778765554 4688899999999999998865333222222 234456


Q ss_pred             HHhc-CcCCHHHHHHHHhccCCCC
Q 018834          264 DKCF-GLDTVEEIIDSLESEASLI  286 (350)
Q Consensus       264 ~~~f-~~~~~~ei~~~lek~~~~~  286 (350)
                      ..+| +.+..+++.++++|++|.+
T Consensus       249 ~~~~~~~d~~eg~~af~ekr~p~~  272 (275)
T PLN02664        249 SAMLVSDDLNEAVSAQIQKRKPVF  272 (275)
T ss_pred             HHhccChhHHHHHHHHhccCCCCC
Confidence            6677 4566777888889987765

>PRK07511 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5.9e-49  Score=363.73  Aligned_cols=252  Identities=21%  Similarity=0.287  Sum_probs=214.9

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      .++.++++++|++||||||++.|++|.+|+.+|.++++.++.|++||+|||+|.|++||+|+|++++..... .......
T Consensus         3 ~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g~~F~~G~Dl~~~~~~~~-~~~~~~~   81 (260)
T PRK07511          3 AELLSRREGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAGGFFCAGGNLNRLLENRA-KPPSVQA   81 (260)
T ss_pred             CeeEEEeECCEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCCCCcccCcCHHHHhhccc-ccchhHH
Confidence            358889999999999999999999999999999999999999999999999999999999999998864211 1223344


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .++...+.++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus        82 ~~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~  161 (260)
T PRK07511         82 ASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQLATE  161 (260)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHHHHHH
Confidence            5566777888899999999999999999999999999999999999999999999999999999999999999988 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhcC-c
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCFG-L  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f~-~  269 (350)
                      |++||++++|+||+++||||+++|++++.+ +.+.+++++..+|.++...|+.++........ ....+...+..+|. .
T Consensus       162 l~ltg~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~  241 (260)
T PRK07511        162 LLLEGKPISAERLHALGVVNRLAEPGQALAEALALADQLAAGSPNALARIKSLIADAPEATLAAQLEAERDHFVASLHHA  241 (260)
T ss_pred             HHHhCCCCCHHHHHHcCCccEeeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc
Confidence            999999999999999999999999887655 44445678888999999999998765433322 23334566777884 5


Q ss_pred             CCHHHHHHHHhccCCCC
Q 018834          270 DTVEEIIDSLESEASLI  286 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~  286 (350)
                      +..+.+.+++++++|.+
T Consensus       242 ~~~~~i~~f~~~r~~~~  258 (260)
T PRK07511        242 DALEGIAAFLEKRAPDY  258 (260)
T ss_pred             hHHHHHHHHhccCCCCC
Confidence            66667777888887654

>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB

Probab=100.00  E-value=5e-49  Score=363.39  Aligned_cols=250  Identities=21%  Similarity=0.255  Sum_probs=208.3

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      ++++++++|++||||||++.|++|.+|+.+|.++++.++.|+ +++|||+|.|++||+|+|++++.... ....+....+
T Consensus         1 ~~~e~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~   78 (256)
T TIGR02280         1 ILSALEAGVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAGRGFCAGQDLSERNPTP-GGAPDLGRTI   78 (256)
T ss_pred             CeEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCCCCcccCcCHHHHhhcc-ccchhHHHHH
Confidence            467889999999999999999999999999999999999998 99999999999999999999875321 1111111122


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA  194 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~  194 (350)
                      ......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus        79 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~~a~~l~  158 (256)
T TIGR02280        79 ETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRARAMGLA  158 (256)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHHHHHHHH
Confidence            22234567788999999999999999999999999999999999999999999999999999999999999998 99999


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-CcCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-GLDT  271 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-~~~~  271 (350)
                      +||++++|+||+++|||++++|++++.+... .+.+++..++.++..+|+.++.......... ..+......+| +.+.
T Consensus       159 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~  238 (256)
T TIGR02280       159 MLGEKLDARTAASWGLIWQVVDDAALMDEAQALAVHLAAQPTRGLALTKRAIQAAATNSLDTQLDLERDLQRELGRSADY  238 (256)
T ss_pred             HcCCCCCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcChhH
Confidence            9999999999999999999999988776544 4467888999999999999986543332222 22355666777 4566


Q ss_pred             HHHHHHHHhccCCCCC
Q 018834          272 VEEIIDSLESEASLIN  287 (350)
Q Consensus       272 ~~ei~~~lek~~~~~~  287 (350)
                      .+.+.++++|+.|.+.
T Consensus       239 ~eg~~af~~kr~p~~~  254 (256)
T TIGR02280       239 AEGVTAFLDKRNPQFT  254 (256)
T ss_pred             HHHHHHHHcCCCCCCC
Confidence            6777788899877654

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).

>PRK07658 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5e-49  Score=363.67  Aligned_cols=249  Identities=24%  Similarity=0.311  Sum_probs=212.1

Q ss_pred             cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834           35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD  114 (350)
Q Consensus        35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~  114 (350)
                      .+.++++++|++||||||++ |++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++...   ........
T Consensus         3 ~i~~~~~~~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~~   78 (257)
T PRK07658          3 FLSVRVEDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEGRFFSAGADIKEFTSV---TEAEQATE   78 (257)
T ss_pred             eEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcc---CchhhHHH
Confidence            67889999999999999986 999999999999999999999999999999999999999999987532   11122233


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHH
Q 018834          115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL  193 (350)
Q Consensus       115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l  193 (350)
                      +......++..|..+|||+||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +++|
T Consensus        79 ~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l  158 (257)
T PRK07658         79 LAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKAKALEM  158 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHHHHHHH
Confidence            445556788889999999999999999999999999999999999999999999999999999999999999998 9999


Q ss_pred             hhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-cC
Q 018834          194 ALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-LD  270 (350)
Q Consensus       194 ~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~~  270 (350)
                      ++||++++|+||+++||||+++|++++.+. .+.+.+++..+|.++..+|+.++......... ...+...+..++. .+
T Consensus       159 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~  238 (257)
T PRK07658        159 MLTSEPITGAEALKWGLVNGVFPEETLLDDAKKLAKKIAGKSPATTRAVLELLQTTKSSSYYEGVKREAKIFGEVFTSED  238 (257)
T ss_pred             HHcCCCcCHHHHHHcCCcCeecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHH
Confidence            999999999999999999999999887654 44456888899999999999987654332222 2334566777774 56


Q ss_pred             CHHHHHHHHhccCCCCC
Q 018834          271 TVEEIIDSLESEASLIN  287 (350)
Q Consensus       271 ~~~ei~~~lek~~~~~~  287 (350)
                      ..+.+.++++|++|.+.
T Consensus       239 ~~egi~af~~kr~p~~~  255 (257)
T PRK07658        239 AKEGVQAFLEKRKPSFS  255 (257)
T ss_pred             HHHHHHHHHcCCCCCCC
Confidence            67778888899877653

>PRK08139 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=8e-49  Score=363.69  Aligned_cols=250  Identities=22%  Similarity=0.266  Sum_probs=213.2

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      .+.+.++.+++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++...   ...+..
T Consensus        10 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~~~   86 (266)
T PRK08139         10 APLLLREDRDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAGKAFCAGHDLKEMRAA---RGLAYF   86 (266)
T ss_pred             CCceEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCCCcceeccCHHHHhcc---cchhHH
Confidence            45789999999999999999999999999999999999999999999999999999999999999987532   122233


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+++...+++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++| +++|+|++|.. ++
T Consensus        87 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG~~~A~  165 (266)
T PRK08139         87 RALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVPRKQAM  165 (266)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhCHHHHH
Confidence            44566667788899999999999999999999999999999999999999999999999999875 57899999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~  268 (350)
                      +|++||++++|+||+++||||+++|++++.+.... +.+++..++.++...|+.++......... ...+...+..+| +
T Consensus       166 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~  245 (266)
T PRK08139        166 EMLLTGEFIDAATAREWGLVNRVVPADALDAAVARLAAVIAAKSPAAVRIGKEAFYRQAEMPLADAYAYAGDVMAENMMA  245 (266)
T ss_pred             HHHHcCCccCHHHHHHcCCccEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999888765544 46888999999999999998754433222 223345566676 4


Q ss_pred             cCCHHHHHHHHhccCCCC
Q 018834          269 LDTVEEIIDSLESEASLI  286 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~  286 (350)
                      .+..+++.++++|++|.+
T Consensus       246 ~d~~eg~~af~~kr~p~~  263 (266)
T PRK08139        246 EDAEEGIDAFLEKRPPEW  263 (266)
T ss_pred             chHHHHHHHHhcCCCCCC
Confidence            667777888889887765

>PRK07799 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.5e-49  Score=364.00  Aligned_cols=252  Identities=23%  Similarity=0.246  Sum_probs=208.0

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      .+.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++.... .+. ...
T Consensus         4 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~-~~~   81 (263)
T PRK07799          4 GPHALVEQRGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAGGAFCAGMDLKAATKKP-PGD-SFK   81 (263)
T ss_pred             CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccccCHHHHhhcc-ccc-hhh
Confidence            356899999999999999999999999999999999999999999999999999999999999999986431 111 101


Q ss_pred             HH-H-HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          113 KD-F-FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       113 ~~-~-~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      .. + ...... +..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. 
T Consensus        82 ~~~~~~~~~~~-~~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~  160 (263)
T PRK07799         82 DGSYDPSRIDA-LLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPYTV  160 (263)
T ss_pred             hhhhhhhHHHH-HHHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCHHH
Confidence            01 1 111222 3346899999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f  267 (350)
                      +++|++||++++|+||+++||||+++|++++.+ +.+.+.+++..+|.++..+|+.++......... ...+...+..+|
T Consensus       161 a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~  240 (263)
T PRK07799        161 ACDLLLTGRHITAAEAKEIGLIGHVVPDGQALDKALELAELINANGPLAVQAILRTIRETEGMHENEAFKIDTKIGIPVF  240 (263)
T ss_pred             HHHHHHcCCCCCHHHHHHcCCccEecCcchHHHHHHHHHHHHHhcChHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999988765 445557888899999999999988654332222 222355666777


Q ss_pred             C-cCCHHHHHHHHhccCCCCC
Q 018834          268 G-LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       268 ~-~~~~~ei~~~lek~~~~~~  287 (350)
                      . .+..+.+.+++++++|.+.
T Consensus       241 ~~~~~~egi~af~~~r~p~~~  261 (263)
T PRK07799        241 LSEDAKEGPRAFAEKRAPNFQ  261 (263)
T ss_pred             cCccHHHHHHHHHccCCCCCC
Confidence            4 5667777788898877653

>PRK08258 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=8.7e-49  Score=365.60  Aligned_cols=253  Identities=19%  Similarity=0.230  Sum_probs=214.2

Q ss_pred             cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834           35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD  114 (350)
Q Consensus        35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~  114 (350)
                      .+.++.+++|++||||||++.|+|+.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.......+......
T Consensus        18 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g~~FsaG~Dl~~~~~~~~~~~~~~~~~   97 (277)
T PRK08258         18 HFLWEVDDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAGGNFCSGGDVHEIIGPLTKMDMPELLA   97 (277)
T ss_pred             ceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCCCCcccccCHHHHhccccccChhHHHH
Confidence            68899999999999999999999999999999999999999999999999999999999999998753211112222334


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccC-CCchHHHHhhccHHH-HHH
Q 018834          115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P-~~G~s~~L~rl~g~~-a~~  192 (350)
                      +.....+++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++| ++|++++|++++|.. +++
T Consensus        98 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~~a~~  177 (277)
T PRK08258         98 FTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQGRASE  177 (277)
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHHHHHH
Confidence            445556788889999999999999999999999999999999999999999999999995 789999999999988 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-c
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-L  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~  269 (350)
                      |++||++++|+||+++||||+++|++++.+... .+.+++..++.++..+|+.++......... ...+...+..+|. .
T Consensus       178 l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~  257 (277)
T PRK08258        178 LLYTGRSMSAEEGERWGFFNRLVEPEELLAEAQALARRLAAGPTFAHGMTKTMLHQEWDMGLEEAIEAEAQAQAICMQTE  257 (277)
T ss_pred             HHHcCCCCCHHHHHHcCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCc
Confidence            999999999999999999999999888776544 446888999999999999998754433332 2234556677774 5


Q ss_pred             CCHHHHHHHHhccCCCCC
Q 018834          270 DTVEEIIDSLESEASLIN  287 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~  287 (350)
                      +..+++.++++|++|.+.
T Consensus       258 d~~eg~~af~ekr~p~~~  275 (277)
T PRK08258        258 DFRRAYEAFVAKRKPVFE  275 (277)
T ss_pred             hHHHHHHHHhcCCCCCCC
Confidence            666777788899887653

>PRK08140 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.6e-49  Score=363.82  Aligned_cols=252  Identities=22%  Similarity=0.272  Sum_probs=209.0

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +.+.++.+++|++||||||+++|++|.+|+.+|.+++++++ |+++++|||+|.|++||+|+|++++.............
T Consensus         4 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~   82 (262)
T PRK08140          4 ETILLAIEAGVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAGRGFCAGQDLADRDVTPGGAMPDLGE   82 (262)
T ss_pred             ceEEEEeECCEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCCCCcccCcChHHHhccccccchhhHH
Confidence            46889999999999999999999999999999999999999 99999999999999999999999875321011111111


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .+......++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus        83 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~~a~~  162 (262)
T PRK08140         83 SIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVGMARALG  162 (262)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhCHHHHHH
Confidence            1222233467788999999999999999999999999999999999999999999999999999999999999998 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-c
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-L  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~  269 (350)
                      |++||++++|+||+++||||+++|++++.+.. +.+++++..++.++..+|+.++......... ...+......++. .
T Consensus       163 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~  242 (262)
T PRK08140        163 LALLGEKLSAEQAEQWGLIWRVVDDAALADEAQQLAAHLATQPTRGLALIKQAMNASATNTLDAQLDLERDLQREAGRSA  242 (262)
T ss_pred             HHHcCCCcCHHHHHHcCCccEeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCh
Confidence            99999999999999999999999998877544 4456788899999999999998654333222 2223456667774 5


Q ss_pred             CCHHHHHHHHhccCCCC
Q 018834          270 DTVEEIIDSLESEASLI  286 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~  286 (350)
                      +..+.+.++++|++|.+
T Consensus       243 ~~~e~~~af~~kr~p~~  259 (262)
T PRK08140        243 DYAEGVSAFLEKRAPRF  259 (262)
T ss_pred             hHHHHHHHHhcCCCCCC
Confidence            66677778889887764

>PRK06563 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.7e-49  Score=363.34  Aligned_cols=248  Identities=20%  Similarity=0.210  Sum_probs=205.4

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      |.++++++|++||||||++.|++|.+|+.+|.+++++++.|++|++|||+|.|+.||+|+|++++........    ..+
T Consensus         1 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~~~~~~----~~~   76 (255)
T PRK06563          1 VSRERRGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHGEHFTAGLDLADVAPKLAAGG----FPF   76 (255)
T ss_pred             CeEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCCcCCcCHHHHhhccccch----hhh
Confidence            4678899999999999999999999999999999999999999999999999999999999998754211111    112


Q ss_pred             HHHHHH-HHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHH
Q 018834          116 FRTLYS-FIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL  193 (350)
Q Consensus       116 ~~~~~~-l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l  193 (350)
                      .....+ +...+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. +++|
T Consensus        77 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l  156 (255)
T PRK06563         77 PEGGIDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWGNAMRY  156 (255)
T ss_pred             hhhhhHHHHHHHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHHHHHHH
Confidence            211222 22357899999999999999999999999999999999999999999999999999999999999998 9999


Q ss_pred             hhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhcC-cC
Q 018834          194 ALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFG-LD  270 (350)
Q Consensus       194 ~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f~-~~  270 (350)
                      ++||++++|+||+++||||+++|++++.+. .+.+++++..+|.+++.+|+.++........... .+...+..+|+ .+
T Consensus       157 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~d  236 (255)
T PRK06563        157 LLTGDEFDAQEALRLGLVQEVVPPGEQLERAIELAERIARAAPLGVQATLASARAAVREGEAAAAAQLPPELRPLFTSED  236 (255)
T ss_pred             HHcCCCcCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCch
Confidence            999999999999999999999999887654 4444678889999999999998765433322222 23556677775 55


Q ss_pred             CHHHHHHHHhccCCCCC
Q 018834          271 TVEEIIDSLESEASLIN  287 (350)
Q Consensus       271 ~~~ei~~~lek~~~~~~  287 (350)
                      ..+.+.++++|++|.+.
T Consensus       237 ~~eg~~af~~kr~p~~~  253 (255)
T PRK06563        237 AKEGVQAFLERRPARFK  253 (255)
T ss_pred             HHHHHHHHhcCCCCCCC
Confidence            66667788899877653

>PRK06144 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=8.6e-49  Score=362.82  Aligned_cols=252  Identities=24%  Similarity=0.308  Sum_probs=213.9

Q ss_pred             ccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcC
Q 018834           29 TDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG  107 (350)
Q Consensus        29 ~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~  107 (350)
                      +....+.+.++++++|++||||||+++|+||.+|+.+|.+++++++.|+++++|||+|+| ++||+|+|++++...   .
T Consensus         3 ~~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~---~   79 (262)
T PRK06144          3 MTTSTDELLLEVRGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAF---S   79 (262)
T ss_pred             cccCCCceEEEeeCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhc---c
Confidence            344456789999999999999999999999999999999999999999999999999998 799999999987542   1


Q ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEeccccc-ccccCCCchHHHHhhcc
Q 018834          108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL-IGFHPDAGASFYLSHLP  186 (350)
Q Consensus       108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~-iGl~P~~G~s~~L~rl~  186 (350)
                      ..+....+......++..|.++||||||+|||+|+|||++|+++||||||+++++|++||++ +|++|++|++++|++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~v  159 (262)
T PRK06144         80 TAEDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALL  159 (262)
T ss_pred             chhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHh
Confidence            11222334455667888899999999999999999999999999999999999999999997 99999999999999999


Q ss_pred             HHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHH
Q 018834          187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD  264 (350)
Q Consensus       187 g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~  264 (350)
                      |.. ++++++||++++|+||+++||||+++|++++.+.. +.+++++..++.++...|+.++.....   ........+.
T Consensus       160 G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~---~l~~~~~~~~  236 (262)
T PRK06144        160 GAARVKDMLFTARLLEAEEALAAGLVNEVVEDAALDARADALAELLAAHAPLTLRATKEALRRLRRE---GLPDGDDLIR  236 (262)
T ss_pred             CHHHHHHHHHcCCCcCHHHHHHcCCcCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhc---CHHHHHHHHH
Confidence            988 99999999999999999999999999998887644 455788899999999999998764322   2222345666


Q ss_pred             HhcC-cCCHHHHHHHHhccCCCC
Q 018834          265 KCFG-LDTVEEIIDSLESEASLI  286 (350)
Q Consensus       265 ~~f~-~~~~~ei~~~lek~~~~~  286 (350)
                      .+|. .+..+.+.++++|++|.+
T Consensus       237 ~~~~~~~~~e~~~af~~kr~p~~  259 (262)
T PRK06144        237 MCYMSEDFREGVEAFLEKRPPKW  259 (262)
T ss_pred             HHhcChHHHHHHHHHhcCCCCCC
Confidence            7775 556666778889887765

>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase)

Probab=100.00  E-value=7.4e-49  Score=362.65  Aligned_cols=250  Identities=17%  Similarity=0.209  Sum_probs=207.0

Q ss_pred             cEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834           35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        35 ~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      .+.+++ +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++...... .....
T Consensus         3 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~-~~~~~   81 (259)
T TIGR01929         3 DIRYEKSTDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYGYI-DDSGV   81 (259)
T ss_pred             eEEEEEcCCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhcccc-chhhH
Confidence            477888 899999999999999999999999999999999999999999999999 899999999986421000 11111


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..  .....++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        82 ~~--~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~~a~  159 (259)
T TIGR01929        82 HR--LNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQKKAR  159 (259)
T ss_pred             HH--HHHHHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHHHHH
Confidence            11  1234567788999999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-Cc
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-GL  269 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-~~  269 (350)
                      +|++||++++|+||+++||||++||++++.+.. +.+++++..++.++..+|+.++............+...+..++ +.
T Consensus       160 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~e~~~~~~~~~~~  239 (259)
T TIGR01929       160 EIWFLCRQYDAEQALDMGLVNTVVPLADLEKETVRWCREILQKSPMAIRMLKAALNADCDGQAGLQELAGNATMLFYMTE  239 (259)
T ss_pred             HHHHhCCccCHHHHHHcCCcccccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHhcCc
Confidence            999999999999999999999999998887644 4457899999999999999987643322111112234556666 46


Q ss_pred             CCHHHHHHHHhccCCCCC
Q 018834          270 DTVEEIIDSLESEASLIN  287 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~  287 (350)
                      +..+.+.++++|++|.+.
T Consensus       240 d~~egi~af~~kr~p~~~  257 (259)
T TIGR01929       240 EGQEGRNAFLEKRQPDFS  257 (259)
T ss_pred             cHHHHHHHHhccCCCCCC
Confidence            677777788899877653

This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.

>PRK07260 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.8e-49  Score=362.28  Aligned_cols=249  Identities=22%  Similarity=0.327  Sum_probs=209.7

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +++.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++......+......
T Consensus         2 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~   81 (255)
T PRK07260          2 EHIIYEVEDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANGKVFSVGGDLVEMKRAVDEDDVQSLV   81 (255)
T ss_pred             CceEEEEECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccccCHHHHHhhccccchhhHH
Confidence            46888999999999999999999999999999999999999999999999999999999999999986432222222222


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .+.+..++++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +++
T Consensus        82 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~~  161 (255)
T PRK07260         82 KIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLNRATH  161 (255)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHHHHHH
Confidence            3444556778889999999999999999999999999999999999999999999999999999999999999987 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcC-c
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFG-L  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~-~  269 (350)
                      |++||++++|+||+++||||+++|++++.+.... +.+++..++.++...|+.++.......... ..+...+..++. .
T Consensus       162 l~l~g~~~sa~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~~  241 (255)
T PRK07260        162 LAMTGEALTAEKALEYGFVYRVAESEKLEKTCEQLLKKLRRGSSNSYAAIKSLVWESFFKGWEDYAKLELALQESLAFKE  241 (255)
T ss_pred             HHHhCCccCHHHHHHcCCcceecCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhcCH
Confidence            9999999999999999999999999888765544 468888899999999999987543332222 223456666764 5


Q ss_pred             CCHHHHHHHHhcc
Q 018834          270 DTVEEIIDSLESE  282 (350)
Q Consensus       270 ~~~~ei~~~lek~  282 (350)
                      +..+.+.++++|+
T Consensus       242 ~~~e~~~af~~kr  254 (255)
T PRK07260        242 DFKEGVRAFSERR  254 (255)
T ss_pred             HHHHHHHHHHhcC
Confidence            6666666767765

>PRK08252 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.3e-48  Score=360.09  Aligned_cols=247  Identities=21%  Similarity=0.286  Sum_probs=204.8

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      .+.+.++++++|++||||||+++|++|.+|+.+|.+++++++.|++|++|||+|.|+.||+|+|++++...   ......
T Consensus         2 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~~~~~   78 (254)
T PRK08252          2 SDEVLVERRGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAGGTFCAGMDLKAFARG---ERPSIP   78 (254)
T ss_pred             CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCceEcCcCHHHHhcc---cchhhh
Confidence            34688999999999999999999999999999999999999999999999999999999999999988642   111111


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      .   .....+.  ...+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus        79 ~---~~~~~~~--~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a~  153 (254)
T PRK08252         79 G---RGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYHIAM  153 (254)
T ss_pred             H---HHHHHHH--HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHHHHH
Confidence            1   1111121  2479999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-~  268 (350)
                      +|++||++++|+||+++||||+++|++++.+. .+.+.+++..+|.++..+|+.++.......... ..+...+..++ +
T Consensus       154 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~  233 (254)
T PRK08252        154 ELALTGDMLTAERAHELGLVNRLTEPGQALDAALELAERIAANGPLAVAASKRIVVESGDWSEDEMFARQRELIAPVFTS  233 (254)
T ss_pred             HHHHcCCccCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999887654 444578889999999999999976533222222 22345566666 5


Q ss_pred             cCCHHHHHHHHhccCCCCC
Q 018834          269 LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~~  287 (350)
                      .+..+.+.++++|++|.|.
T Consensus       234 ~~~~eg~~af~~kr~p~~~  252 (254)
T PRK08252        234 ADAKEGATAFAEKRAPVWT  252 (254)
T ss_pred             chHHHHHHHHhcCCCCCCC
Confidence            6667777788898877653

>PRK07468 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.5e-48  Score=361.36  Aligned_cols=253  Identities=21%  Similarity=0.305  Sum_probs=209.6

Q ss_pred             CCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~-~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.+.++++ ++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++...... ....
T Consensus         3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~   81 (262)
T PRK07468          3 FETIRIAVDARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAGKSFCAGGDLGWMRAQMTA-DRAT   81 (262)
T ss_pred             cceEEEEEcCCcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCcCHHHHHhhccc-chhh
Confidence            345788875 68999999999999999999999999999999999999999999999999999999987542111 1111


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ....+.....++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++ +|.. +
T Consensus        82 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~~-vG~~~a  160 (262)
T PRK07468         82 RIEEARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVAR-MGEANA  160 (262)
T ss_pred             HHHHHHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHhh-ccHHHH
Confidence            2223444566788899999999999999999999999999999999999999999999999999999987766 6777 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCC-cchHHHHHHHHHHhcC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCFG  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~i~~~f~  268 (350)
                      ++|++||++++|+||+++||||+++|++++++... .+.+++..+|.++..+|+.++...... ......+...+..+|.
T Consensus       161 ~~lll~g~~~~a~eA~~~Glv~~v~~~~~l~~~~~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~  240 (262)
T PRK07468        161 RRVFMSARLFDAEEAVRLGLLSRVVPAERLDAAVEAEVTPYLSCAPGAVAAAKALVRALGAPIDEAVIDATIEALADTWE  240 (262)
T ss_pred             HHHHHhCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhccChHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999888876554 447888899999999999887653322 2223334566777774


Q ss_pred             -cCCHHHHHHHHhccCCCCC
Q 018834          269 -LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       269 -~~~~~ei~~~lek~~~~~~  287 (350)
                       .+..+.+.++++|++|.|.
T Consensus       241 s~d~~e~~~af~~kr~~~~~  260 (262)
T PRK07468        241 TEEAREGIAAFFDKRAPAWR  260 (262)
T ss_pred             CHHHHHHHHHHHcCCCCCCC
Confidence             5666778888999887653

>PRK08138 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.8e-48  Score=360.61  Aligned_cols=248  Identities=25%  Similarity=0.345  Sum_probs=209.1

Q ss_pred             CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      .+.+.++. +++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++...   ..   
T Consensus         6 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~---~~---   79 (261)
T PRK08138          6 TDVVLLERPADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGEKVFAAGADIKEFATA---GA---   79 (261)
T ss_pred             CCCEEEEEccCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCeeCCcCHHHHhcc---ch---
Confidence            34677887 789999999999999999999999999999999999999999999999999999999987532   11   


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...+.+..+.++..+..+|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. +
T Consensus        80 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a  159 (261)
T PRK08138         80 IEMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKFKA  159 (261)
T ss_pred             hHHHHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHHHH
Confidence            122334456677889999999999999999999999999999999999999999999999999999999999999998 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~  268 (350)
                      ++|++||++++|+||+++||||+++|++++.+....+ .+++..++.++..+|+.++......... ...+.+.+..++.
T Consensus       160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~  239 (261)
T PRK08138        160 MRMALTGCMVPAPEALAIGLVSEVVEDEQTLPRALELAREIARMPPLALAQIKEVVLAGADAPLDAALALERKAFQLLFD  239 (261)
T ss_pred             HHHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999998876544444 6788889999999999887643332222 2234556677775


Q ss_pred             -cCCHHHHHHHHhccCCCC
Q 018834          269 -LDTVEEIIDSLESEASLI  286 (350)
Q Consensus       269 -~~~~~ei~~~lek~~~~~  286 (350)
                       .+..+.+.++++|++|.+
T Consensus       240 ~~~~~~~i~af~~kr~~~~  258 (261)
T PRK08138        240 SEDQKEGMDAFLEKRKPAY  258 (261)
T ss_pred             CHHHHHHHHHHhcCCCCCC
Confidence             556666777788887765

>PLN02600 enoyl-CoA hydratase

Probab=100.00  E-value=1.3e-48  Score=359.43  Aligned_cols=243  Identities=22%  Similarity=0.311  Sum_probs=208.2

Q ss_pred             eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +++|++||||||+++|+||.+|+.+|.+++++++.|+++++|||+|.+ ++||+|+|++++...    .......++...
T Consensus         2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~----~~~~~~~~~~~~   77 (251)
T PLN02600          2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM----SPSEVQKFVNSL   77 (251)
T ss_pred             CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc----ChHHHHHHHHHH
Confidence            478999999999999999999999999999999999999999999984 899999999987532    122234455656


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhcCC
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA  198 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ltG~  198 (350)
                      +.++..+..+|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++|++||+
T Consensus        78 ~~~~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~~a~~l~ltg~  157 (251)
T PLN02600         78 RSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRSRAKELIFTGR  157 (251)
T ss_pred             HHHHHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHHHHHHHHHhCC
Confidence            7788889999999999999999999999999999999999999999999999999999999999999988 999999999


Q ss_pred             CCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-CcCCHHHH
Q 018834          199 KLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-GLDTVEEI  275 (350)
Q Consensus       199 ~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~~~~~~ei  275 (350)
                      +++|+||+++||||+++|++++.+ ..+.+.+++..+|.++..+|+.++......... ...+...+..+| +.+..+++
T Consensus       158 ~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~d~~eg~  237 (251)
T PLN02600        158 RIGAREAASMGLVNYCVPAGEAYEKALELAQEINQKGPLAIKMAKKAINEGSEVDMASGLEIEEECYEQVLKTKDRLEGL  237 (251)
T ss_pred             ccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            999999999999999999988765 444557888999999999999998654333222 223456677777 46677778


Q ss_pred             HHHHhccCCCCC
Q 018834          276 IDSLESEASLIN  287 (350)
Q Consensus       276 ~~~lek~~~~~~  287 (350)
                      .++++|++|.+.
T Consensus       238 ~af~ekr~p~~~  249 (251)
T PLN02600        238 AAFAEKRKPVYT  249 (251)
T ss_pred             HHHhcCCCCCCC
Confidence            888899987653

>PRK05981 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.5e-48  Score=362.11  Aligned_cols=255  Identities=19%  Similarity=0.236  Sum_probs=212.5

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCC-CceEEEEEcCCCccccCCChhhHHHhhhcC--Ch
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDP-NIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--KL  109 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~-~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--~~  109 (350)
                      ++.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|+ ++++|||+|.|++||+|+|++++.......  ..
T Consensus         3 ~~~v~~~~~~~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~   82 (266)
T PRK05981          3 FKKVTLDFDGGVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAGRGFCTGANLQGRGSGGRESDSGG   82 (266)
T ss_pred             cceEEEEeECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCcccccCHHhhhcccccccccc
Confidence            456899999999999999999999999999999999999999876 499999999999999999999875321110  01


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834          110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                      .....+....+.+...|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus        83 ~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~vg~~  162 (266)
T PRK05981         83 DAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRLVGKA  162 (266)
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHHhHHH
Confidence            11223344456788889999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHh
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKC  266 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~  266 (350)
                       +++|++||++++|+||+++|||++++|++++.+. .+.+.+++..++.++..+|+.++........ ....+...+..+
T Consensus       163 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~  242 (266)
T PRK05981        163 RAMELSLLGEKLPAETALQWGLVNRVVDDAELMAEAMKLAHELANGPTVALGLIRKLYWDSPENDFEEQLNLEREAQRIA  242 (266)
T ss_pred             HHHHHHHhCCCcCHHHHHHcCCceEeeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHH
Confidence             9999999999999999999999999999887654 4444678888999999999998765333222 223345566677


Q ss_pred             cC-cCCHHHHHHHHhccCCCCC
Q 018834          267 FG-LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       267 f~-~~~~~ei~~~lek~~~~~~  287 (350)
                      |. .+..+.+.++++|++|.+.
T Consensus       243 ~~s~d~~e~~~af~~kr~~~~~  264 (266)
T PRK05981        243 GKTEDFKEGVGAFLQKRPAQFK  264 (266)
T ss_pred             hcChhHHHHHHHHhcCCCCCCC
Confidence            74 5667778888899877653

>PRK05995 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.7e-48  Score=361.09  Aligned_cols=253  Identities=23%  Similarity=0.332  Sum_probs=210.1

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++........ ...
T Consensus         3 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~-~~~   81 (262)
T PRK05995          3 YETLEIEQRGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAGKAFCAGADLNWMKKMAGYSD-DEN   81 (262)
T ss_pred             CceEEEEeeCCEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCccccCcCHHHHhhhcccCc-hhh
Confidence            4568899999999999999999999999999999999999999999999999999999999999998754211111 111


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ...+...++++..|.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++ |++++|.. ++
T Consensus        82 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg~~~a~  160 (262)
T PRK05995         82 RADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMGERAAR  160 (262)
T ss_pred             hhHHHHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhCHHHHH
Confidence            22234556788889999999999999999999999999999999999999999999999999988765 78888988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH--HHHHHHHHHhcC
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV--IHRIDIVDKCFG  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~i~~~f~  268 (350)
                      +|++||++++|+||+++||||+++|++++.+....+ .+++..++.++..+|+.++..........  ..+...+..++.
T Consensus       161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~  240 (262)
T PRK05995        161 RYFLTAERFDAAEALRLGLVHEVVPAEALDAKVDELLAALVANSPQAVRAGKRLVRDVAGRPIDAALIADTASRIALIRA  240 (262)
T ss_pred             HHHHcCCccCHHHHHHcCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCChhhHHHHHHHHHHHHHhc
Confidence            999999999999999999999999988887655444 68888999999999999876433222222  223445566664


Q ss_pred             -cCCHHHHHHHHhccCCCCC
Q 018834          269 -LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       269 -~~~~~ei~~~lek~~~~~~  287 (350)
                       .+..+.+.++++|++|.+.
T Consensus       241 ~~d~~e~~~af~~kr~p~~~  260 (262)
T PRK05995        241 TEEAREGVAAFLEKRKPAWR  260 (262)
T ss_pred             CHHHHHHHHHHhcCCCCCCC
Confidence             5667778888999877653

>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=100.00  E-value=1.7e-49  Score=354.46  Aligned_cols=249  Identities=25%  Similarity=0.346  Sum_probs=209.2

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ....+...+++|+.||||||+++|+|+..|+.+|.++|..++.|+.++++||||.|++||+|+|++++......   +-.
T Consensus        36 ~~~~~~~~d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~gksFcsG~Dl~e~~~~~~~---~~~  112 (290)
T KOG1680|consen   36 IKIELVGEDNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSGKSFCSGADLKEMKKDEFQ---DVS  112 (290)
T ss_pred             ceeEEeecCCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCCCccccccCHHHHhhcccc---ccc
Confidence            33455667789999999999999999999999999999999999999999999999999999999998753111   111


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ...+.+.+   ..+.+.+||+||++||+|+|||++|++.||+|||+++++|++|+.++|++|.+|+|++|+|.+|.. |+
T Consensus       113 ~~~~~~~~---~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s~Al  189 (290)
T KOG1680|consen  113 DGIFLRVW---DLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKSRAL  189 (290)
T ss_pred             cccccchh---hhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChHHHH
Confidence            12122222   223479999999999999999999999999999999999999999999999999999999999998 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCCh-HHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKL-PLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l-~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f-~  268 (350)
                      ++++||++++|+||.++|||++|+|.+++ .++.+...+++..++..++..|+.++..........+ .+...+...| .
T Consensus       190 e~~ltg~~~~AqeA~~~GlVn~Vvp~~~~l~eAv~l~~~Ia~~~~~~v~~~K~svn~~~e~~l~e~l~~e~~~~~s~~~~  269 (290)
T KOG1680|consen  190 EMILTGRRLGAQEAKKIGLVNKVVPSGDALGEAVKLAEQIAKNSPLVVRADKESVNAAYETTLFEGLELERDLFGSTFAT  269 (290)
T ss_pred             HHHHhcCcccHHHHHhCCceeEeecchhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhccHHHHHHhhhhhhhhhhhh
Confidence            99999999999999999999999999985 4677777899999999999999999885543333333 3455666666 4


Q ss_pred             cCCHHHHHHHHhccCCCCC
Q 018834          269 LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~~  287 (350)
                      .+..|++.++.+|++++|.
T Consensus       270 ~d~~Eg~~~f~~kr~~~~~  288 (290)
T KOG1680|consen  270 EDRLEGMTAFAEKRKPKFS  288 (290)
T ss_pred             HHHHHHHHHhcccCCcccc
Confidence            6788888888888876553

>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]

Probab=100.00  E-value=2.1e-48  Score=359.41  Aligned_cols=248  Identities=27%  Similarity=0.396  Sum_probs=207.3

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      +..+.++..++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||||.|++||+|+|++++..   .......
T Consensus         4 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g~~FsaG~Dl~~~~~---~~~~~~~   80 (257)
T COG1024           4 YETILVEREDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAGKAFSAGADLKELLS---PEDGNAA   80 (257)
T ss_pred             CCeeEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCceecccCHHHHhc---ccchhHH
Confidence            4568888888999999999999999999999999999999999999999999999999999999999875   1112222


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..++...+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+.|++++|+|++|.. +.
T Consensus        81 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~~a~  160 (257)
T COG1024          81 ENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRGRAK  160 (257)
T ss_pred             HHHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHHHHH
Confidence            36778888899999999999999999999999999999999999999999999999999999889999999999998 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCC-CChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF-  267 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~-~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f-  267 (350)
                      +|++||+.++++||+++|||++++++ +++.+....+ .+++. +|.++...|+.+............ .....+...+ 
T Consensus       161 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~~l~~~a~~~a~~~a~-~~~a~~~~k~~~~~~~~~~l~~~~~~~~~~~~~~~~  239 (257)
T COG1024         161 ELLLTGEPISAAEALELGLVDEVVPDAEELLERALELARRLAA-PPLALAATKRLVRAALEADLAEALEAEALAFARLFS  239 (257)
T ss_pred             HHHHcCCcCCHHHHHHcCCcCeeeCCHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999986 5777655555 45544 889999999888775433222222 2233444455 


Q ss_pred             CcCCHHHHHHHHhccCCC
Q 018834          268 GLDTVEEIIDSLESEASL  285 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~  285 (350)
                      +.+..|.+.++++ +.|.
T Consensus       240 ~~d~~eg~~a~~~-r~p~  256 (257)
T COG1024         240 SEDFREGVRAFLE-RKPV  256 (257)
T ss_pred             ChhHHHHHHHHHc-cCCC
Confidence            4566666777777 5543

>PRK06143 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.8e-48  Score=359.34  Aligned_cols=244  Identities=19%  Similarity=0.296  Sum_probs=206.3

Q ss_pred             CcEEEE-EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834           34 NQVLVE-GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        34 ~~v~~~-~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      .++.++ .+++|++||||||+++|++|.+|+.+|.++++.++.|++||+|||||.| ++||+|+|++++...    +...
T Consensus         6 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~~   81 (256)
T PRK06143          6 AHAGVTRDDRGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATL----DQAS   81 (256)
T ss_pred             ccceeeecCCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhc----Chhh
Confidence            346666 4688999999999999999999999999999999999999999999999 799999999987532    1222


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...+....+.++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|+ |++|++++|++++|.. +
T Consensus        82 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~~~a  160 (256)
T PRK06143         82 AEAFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGWART  160 (256)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCHHHH
Confidence            3445566677888899999999999999999999999999999999999999999999998 8888999999999998 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhcC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCFG  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f~  268 (350)
                      ++|++||++++|+||+++||||+++|++++.+.... +.+++..+|.++..+|+.++........ ....+...+..+|.
T Consensus       161 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~  240 (256)
T PRK06143        161 RWLLLTGETIDAAQALAWGLVDRVVPLAELDAAVERLAASLAGCGPQALRQQKRLLREWEDMPLDVAIDDSVAEFGAAFL  240 (256)
T ss_pred             HHHHHcCCcCCHHHHHHCCCcCeecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999888765544 4688889999999999998865433222 22234556677774


Q ss_pred             -cCCHHHHHHHHhcc
Q 018834          269 -LDTVEEIIDSLESE  282 (350)
Q Consensus       269 -~~~~~ei~~~lek~  282 (350)
                       .+..+.+.++++|+
T Consensus       241 ~~d~~e~~~af~ekr  255 (256)
T PRK06143        241 TGEPQRHMAAFLNRK  255 (256)
T ss_pred             ChHHHHHHHHHHhhc
Confidence             55666666777765

>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated

Probab=100.00  E-value=1.4e-48  Score=361.83  Aligned_cols=253  Identities=19%  Similarity=0.270  Sum_probs=208.7

Q ss_pred             CCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~-~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.+.++++ ++|++||||||++.|++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++...... ....
T Consensus         4 ~~~l~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~   82 (265)
T PRK05674          4 FQTIELIRDPRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRGRHFSAGADLAWMQQSADL-DYNT   82 (265)
T ss_pred             cceEEEEEcCCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhcccc-cchh
Confidence            556888885 78999999999999999999999999999999999999999999999999999999987532110 1111


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ........++++..+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++ +++++|.. +
T Consensus        83 ~~~~~~~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~~-l~~~vG~~~a  161 (265)
T PRK05674         83 NLDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISPF-VVKAIGERAA  161 (265)
T ss_pred             hhHHHHHHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHHH-HHHHhCHHHH
Confidence            112233445678889999999999999999999999999999999999999999999999999987665 78888888 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHH--HHHHHHHhc
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH--RIDIVDKCF  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~i~~~f  267 (350)
                      ++|+|||+.++|+||+++|||++++|++++.+. .+.+.+++..+|.+++.+|+.++............  ....+..++
T Consensus       162 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~  241 (265)
T PRK05674        162 RRYALTAERFDGRRARELGLLAESYPAAELEAQVEAWIANLLLNSPQALRASKDLLREVGDGELSPALRRYCENAIARIR  241 (265)
T ss_pred             HHHHHhCcccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhccChhHHHHHHHHHHHHHHh
Confidence            999999999999999999999999998887754 45557889999999999999988754433222221  234556666


Q ss_pred             -CcCCHHHHHHHHhccCCCCC
Q 018834          268 -GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       268 -~~~~~~ei~~~lek~~~~~~  287 (350)
                       +.+..+++.++++|++|.+.
T Consensus       242 ~s~d~~e~~~af~~kr~p~~~  262 (265)
T PRK05674        242 VSAEGQEGLRAFLEKRTPAWQ  262 (265)
T ss_pred             cCHHHHHHHHHHHccCCCCCC
Confidence             45677778888999877653

>PRK07659 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.2e-48  Score=359.74  Aligned_cols=249  Identities=22%  Similarity=0.302  Sum_probs=212.8

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +.+.++.+++|++||||||++.|++|.+|+.+|.++++.+ .|+++++|||+|.|+.||+|+|++++...   .......
T Consensus         6 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g~~F~aG~Dl~~~~~~---~~~~~~~   81 (260)
T PRK07659          6 ESVVVKYEGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNGRGFSAGGDIKMMLSS---NDESKFD   81 (260)
T ss_pred             ceEEEEeeCCEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCCCCcccccCHHHHhhc---cCchhHH
Confidence            4689999999999999999999999999999999999999 58899999999999999999999987632   1222334


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .++...++++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++
T Consensus        82 ~~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~~a~~  161 (260)
T PRK07659         82 GVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGENKAKQ  161 (260)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHHHHHH
Confidence            5666677888899999999999999999999999999999999999999999999999999999999999999998 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-Cc
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-GL  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~~  269 (350)
                      |++||+.++|+||+++||||+++ ++++.+ +.+.+++++..++.++...|+.++......... ...+.+....++ +.
T Consensus       162 l~ltg~~~~a~eA~~~Glv~~vv-~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~  240 (260)
T PRK07659        162 IIWEGKKLSATEALDLGLIDEVI-GGDFQTAAKQKISEWLQKPLKAMIETKQIYCELNRSQLEQVLQLEKRAQYAMRQTA  240 (260)
T ss_pred             HHHhCCccCHHHHHHcCChHHHh-hhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCH
Confidence            99999999999999999999999 666765 444557888899999999999988654333222 222345566677 46


Q ss_pred             CCHHHHHHHHhccCCCCC
Q 018834          270 DTVEEIIDSLESEASLIN  287 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~  287 (350)
                      +..+.+.++++|++|.+.
T Consensus       241 ~~~egi~af~~kr~p~~~  258 (260)
T PRK07659        241 DHKEGIRAFLEKRLPVFK  258 (260)
T ss_pred             hHHHHHHHHhcCCCCCCC
Confidence            677778888999887654

>PRK06494 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.8e-48  Score=358.90  Aligned_cols=248  Identities=23%  Similarity=0.250  Sum_probs=204.7

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|+| ++||+|+|++++....   ....
T Consensus         3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~---~~~~   79 (259)
T PRK06494          3 LPFSTVERKGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGG---KRGW   79 (259)
T ss_pred             CceeEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcC---cchh
Confidence            35688999999999999999999999999999999999999999999999999998 7999999999875321   1111


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ....+   ..+ ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus        80 ~~~~~---~~~-~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~~a  155 (259)
T PRK06494         80 PESGF---GGL-TSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIGLKRA  155 (259)
T ss_pred             hhHHH---HHH-HHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcCHHHH
Confidence            11111   222 334589999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcchHHH-H--HHHHHHh
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-R--IDIVDKC  266 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~--~~~i~~~  266 (350)
                      ++|++||+.++|+||+++||||+++|++++.+.. +.+++++..+|.++..+|+.++............ +  ......+
T Consensus       156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~  235 (259)
T PRK06494        156 MGMILTGRRVTAREGLELGFVNEVVPAGELLAAAERWADDILACSPLSIRASKQAVYRGLEVSLEEAITAQRDYPAVEAR  235 (259)
T ss_pred             HHHHHcCCcCCHHHHHHcCCCcEecCHhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998877544 4447888999999999999988654333222222 2  2345667


Q ss_pred             cC-cCCHHHHHHHHhccCCCCC
Q 018834          267 FG-LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       267 f~-~~~~~ei~~~lek~~~~~~  287 (350)
                      |. .+..+.+.++++|++|.+.
T Consensus       236 ~~~~d~~eg~~af~~kr~p~~~  257 (259)
T PRK06494        236 RASQDYIEGPKAFAEKRPPRWK  257 (259)
T ss_pred             hcCccHHHHHHHHHccCCCCCC
Confidence            75 5666667777888877653

>PRK05864 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.8e-48  Score=362.02  Aligned_cols=257  Identities=19%  Similarity=0.225  Sum_probs=209.4

Q ss_pred             cCCCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcC-
Q 018834           30 DDLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG-  107 (350)
Q Consensus        30 ~~~~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-  107 (350)
                      .+.++.|.++. +++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++....... 
T Consensus         5 ~~~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g~~FcaG~Dl~~~~~~~~~~~   84 (276)
T PRK05864          5 RSTMSLVLVDHPRPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAGRGFSSGADHKSAGVVPHVEG   84 (276)
T ss_pred             CCCCCceEEeeecCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcchhhhhccccccc
Confidence            34566788887 7899999999999999999999999999999999999999999999999999999999874211000 


Q ss_pred             --ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccC-CCchHHHHhh
Q 018834          108 --KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP-DAGASFYLSH  184 (350)
Q Consensus       108 --~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P-~~G~s~~L~r  184 (350)
                        .......++.....++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~  164 (276)
T PRK05864         85 LTRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPR  164 (276)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHh
Confidence              1111223344455677888999999999999999999999999999999999999999999999997 7899999999


Q ss_pred             ccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCC-CcchHHH-HH
Q 018834          185 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYP-DKNSVIH-RI  260 (350)
Q Consensus       185 l~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~-~~~~~~~-~~  260 (350)
                      ++|.. +++|++||++++|+||+++|||++++|++++.+. .+.+.+++..+|.++..+|+.+...... ....... +.
T Consensus       165 ~vG~~~A~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~  244 (276)
T PRK05864        165 AIGSSRAFEIMLTGRDVDAEEAERIGLVSRQVPDEQLLDTCYAIAARMAGFSRPGIELTKRTLWSGLDAASLEAHMQAEG  244 (276)
T ss_pred             hhCHHHHHHHHHcCCccCHHHHHHcCCcceeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHH
Confidence            99988 9999999999999999999999999999887654 4455788899999999999988764321 2222111 11


Q ss_pred             H-HHHHhc-CcCCHHHHHHHHhccCCCC
Q 018834          261 D-IVDKCF-GLDTVEEIIDSLESEASLI  286 (350)
Q Consensus       261 ~-~i~~~f-~~~~~~ei~~~lek~~~~~  286 (350)
                      . .....| +.+..+.+.++++|++|.+
T Consensus       245 ~~~~~~~~~~~d~~e~~~af~~kr~p~~  272 (276)
T PRK05864        245 LGQLFVRLLTANFEEAVAARAEKRPPVF  272 (276)
T ss_pred             HHHHHHhccChhHHHHHHHHhccCCCCC
Confidence            1 121234 5677777888889987765

>PRK08260 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.3e-48  Score=364.08  Aligned_cols=255  Identities=20%  Similarity=0.231  Sum_probs=209.9

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcC------
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG------  107 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~------  107 (350)
                      +.+.++++++|++||||||++.|+||.+|+.+|.++|+.++.|+++++|||+|.|+.||+|+|++++.......      
T Consensus         4 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~   83 (296)
T PRK08260          4 ETIRYDVADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAGRAFCAGADLSAGGNTFDLDAPRTPV   83 (296)
T ss_pred             ceEEEeeeCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCCeecCcChHHhhhccccccccccc
Confidence            45889999999999999999999999999999999999999999999999999999999999999875311000      


Q ss_pred             -------ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHH
Q 018834          108 -------KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF  180 (350)
Q Consensus       108 -------~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~  180 (350)
                             .......+......++..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~  163 (296)
T PRK08260         84 EADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEAASSW  163 (296)
T ss_pred             ccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCcchhh
Confidence                   0111122223344577789999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccC-CHHHHHHHHHHHhccCCC--Ccch
Q 018834          181 YLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTD-DPSVIEACLEKYSDLVYP--DKNS  255 (350)
Q Consensus       181 ~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~-~~~~i~~~~~~~~~~~~~--~~~~  255 (350)
                      +|+|++|.. +++|++||++++|+||+++|||++++|++++.+. .+.+.+++.. ++.++..+|+.++.....  ....
T Consensus       164 ~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~i~~~~~~~a~~~~K~~l~~~~~~~~~~~~  243 (296)
T PRK08260        164 FLPRLVGLQTALEWVYSGRVFDAQEALDGGLVRSVHPPDELLPAARALAREIADNTSPVSVALTRQMMWRMAGADHPMEA  243 (296)
T ss_pred             hHHHhhCHHHHHHHHHcCCccCHHHHHHCCCceeecCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhcccCCCcHHH
Confidence            999999988 9999999999999999999999999998887654 4444677775 899999999998765321  1122


Q ss_pred             HHHHHHHHHHhc-CcCCHHHHHHHHhccCCCCCc
Q 018834          256 VIHRIDIVDKCF-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       256 ~~~~~~~i~~~f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      ...+...+..++ +.+..+.+.++++|++|.|.+
T Consensus       244 ~~~e~~~~~~~~~~~d~~egi~af~~kr~p~f~~  277 (296)
T PRK08260        244 HRVDSRAIYSRGRSGDGKEGVSSFLEKRPAVFPG  277 (296)
T ss_pred             HHHHHHHHHHHccChhHHHHHHHHhcCCCCCCCC
Confidence            222344566676 456777788889999887653

>PRK06688 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.8e-48  Score=357.52  Aligned_cols=248  Identities=25%  Similarity=0.329  Sum_probs=212.6

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      ..+.++++++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++....  .. .  .
T Consensus         5 ~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~--~~-~--~   79 (259)
T PRK06688          5 TDLLVELEDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAGRAFSAGGDIKDFPKAP--PK-P--P   79 (259)
T ss_pred             CceEEEEECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCccCHHHHhccC--cc-h--H
Confidence            45889999999999999999999999999999999999999999999999999999999999999886431  11 1  3


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .++...++++..+.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. +.+
T Consensus        80 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~  159 (259)
T PRK06688         80 DELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRARAAE  159 (259)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHHHHHH
Confidence            3455667788889999999999999999999999999999999999999999999999999999999999999998 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhcC-c
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCFG-L  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f~-~  269 (350)
                      |++||++++|+||+++||||+++|++++.+.+..+ .+++..++.++..+|+.++......... ...+...+..+|. .
T Consensus       160 l~l~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~  239 (259)
T PRK06688        160 MLLLGEPLSAEEALRIGLVNRVVPAAELDAEADAQAAKLAAGPASALRYTKRAINAATLTELEEALAREAAGFGRLLRTP  239 (259)
T ss_pred             HHHhCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhCCH
Confidence            99999999999999999999999988877654444 6788889999999999887654333222 2234566677775 5


Q ss_pred             CCHHHHHHHHhccCCCC
Q 018834          270 DTVEEIIDSLESEASLI  286 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~  286 (350)
                      +..+.+.+++++++|.+
T Consensus       240 ~~~~~~~af~~~~~p~~  256 (259)
T PRK06688        240 DFREGATAFIEKRKPDF  256 (259)
T ss_pred             HHHHHHHHHHcCCCCCC
Confidence            66666777788887754

>PRK03580 carnitinyl-CoA dehydratase; Provisional

Probab=100.00  E-value=6.2e-48  Score=357.00  Aligned_cols=248  Identities=21%  Similarity=0.303  Sum_probs=206.7

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      +.+.++++++|++||||||+ .|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++...   ....  
T Consensus         3 ~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~---~~~~--   76 (261)
T PRK03580          3 ESLHTTRNGSILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEG---EAPD--   76 (261)
T ss_pred             ceEEEEEECCEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhcc---Ccch--
Confidence            35889999999999999996 5999999999999999999999999999999998 799999999987532   1111  


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+....+.++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus        77 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~~a~  156 (261)
T PRK03580         77 ADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPAIAN  156 (261)
T ss_pred             hhhhhhhhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHHHHH
Confidence            11222234456778899999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHH-HH----HHHHH
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-RI----DIVDK  265 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~----~~i~~  265 (350)
                      ++++||++++|+||+++|||++++|++++.+.+..+ .+++..+|.++...|+.++............ +.    ..+..
T Consensus       157 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~  236 (261)
T PRK03580        157 EMVMTGRRMDAEEALRWGIVNRVVPQAELMDRARELAQQLVNSAPLAIAALKEIYRETSEMPVEEAYRYIRSGVLKHYPS  236 (261)
T ss_pred             HHHHhCCccCHHHHHHcCCCcEecCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHH
Confidence            999999999999999999999999998887655444 6888999999999999987653332222222 11    35566


Q ss_pred             hc-CcCCHHHHHHHHhccCCCCC
Q 018834          266 CF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      +| +.+..+++.++++|++|.+.
T Consensus       237 ~~~~~d~~e~~~af~ekr~~~~~  259 (261)
T PRK03580        237 VLHSEDALEGPRAFAEKRDPVWK  259 (261)
T ss_pred             HhcCccHHHHHHHHhcCCCCCCC
Confidence            77 45667778888899877653

>PRK07509 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=7e-48  Score=357.00  Aligned_cols=253  Identities=22%  Similarity=0.228  Sum_probs=208.5

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.... ......
T Consensus         1 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~~~~   79 (262)
T PRK07509          1 MMDRVSVTIEDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEGGAFCAGLDVKSVASSP-GNAVKL   79 (262)
T ss_pred             CCceEEEEeeCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCCcCCCcCHHHHhccc-chhhhh
Confidence            3567899999999999999999999999999999999999999999999999999999999999999876421 111111


Q ss_pred             HHH----HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH
Q 018834          112 CKD----FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG  187 (350)
Q Consensus       112 ~~~----~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g  187 (350)
                      ...    ......+++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g  159 (262)
T PRK07509         80 LFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGLVR  159 (262)
T ss_pred             HhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHHhC
Confidence            111    1122345666788999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHH
Q 018834          188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDK  265 (350)
Q Consensus       188 ~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~  265 (350)
                      .. +++|++||++++|+||+++||||+++++ ..+.+.+.+.+++..+|.++..+|+.++......... ...+......
T Consensus       160 ~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~-~~~~a~~~a~~l~~~~~~~~~~~K~~l~~~~~~~~~~~~~~e~~~~~~  238 (262)
T PRK07509        160 KDVARELTYTARVFSAEEALELGLVTHVSDD-PLAAALALAREIAQRSPDAIAAAKRLINRSWTASVRALLARESVEQIR  238 (262)
T ss_pred             HHHHHHHHHcCCCcCHHHHHHcCChhhhhch-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence            88 9999999999999999999999999964 2334455557788889999999999987654332222 2223455666


Q ss_pred             hc-CcCCHHHHHHHHhccCCCC
Q 018834          266 CF-GLDTVEEIIDSLESEASLI  286 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~  286 (350)
                      ++ +.+..+++.++++|++|.+
T Consensus       239 ~~~~~d~~e~~~af~ekr~p~~  260 (262)
T PRK07509        239 LLLGKNQKIAVKAQMKKRAPKF  260 (262)
T ss_pred             HhcChhHHHHHHHHhcCCCCCC
Confidence            66 5677777888899987765

>PRK06023 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.8e-48  Score=356.42  Aligned_cols=242  Identities=20%  Similarity=0.264  Sum_probs=200.0

Q ss_pred             CcEEEEEeCC---EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           34 NQVLVEGKAN---SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        34 ~~v~~~~~~~---v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      +.|.++++++   |++||||||++.|++|.+|+.+|.++|+.++.|+++++|||+|.|++||+|+|++++.... .+.  
T Consensus         3 ~~i~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~-~~~--   79 (251)
T PRK06023          3 DHILVERPGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTEGCFSAGNDMQDFLAAA-MGG--   79 (251)
T ss_pred             ceEEEEeecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeecCcCHHHHhhcc-ccc--
Confidence            3588888774   9999999999999999999999999999999999999999999999999999999875421 111  


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                        ..+....++++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|.. 
T Consensus        80 --~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~  157 (251)
T PRK06023         80 --TSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGHQR  157 (251)
T ss_pred             --hhhHHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhHHH
Confidence              12233445677889999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcC
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG  268 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~  268 (350)
                      +.++++||+.++|+||+++|||++++|++++.+. .+.+.+++..++.++..+|+.++............+......+|.
T Consensus       158 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~l~~~~~~e~~~~~~~~~  237 (251)
T PRK06023        158 AFALLALGEGFSAEAAQEAGLIWKIVDEEAVEAETLKAAEELAAKPPQALQIARDLMRGPREDILARIDEEAKHFAARLK  237 (251)
T ss_pred             HHHHHHhCCCCCHHHHHHcCCcceeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999888764 444478889999999999999875422111112223445566665


Q ss_pred             c-CCHHHHHHHHh
Q 018834          269 L-DTVEEIIDSLE  280 (350)
Q Consensus       269 ~-~~~~ei~~~le  280 (350)
                      . +..+.+.++++
T Consensus       238 ~~~~~e~~~af~e  250 (251)
T PRK06023        238 SAEARAAFEAFMR  250 (251)
T ss_pred             CHHHHHHHHHHhc
Confidence            4 44444555554

>PLN02888 enoyl-CoA hydratase

Probab=100.00  E-value=8e-48  Score=356.69  Aligned_cols=249  Identities=21%  Similarity=0.308  Sum_probs=208.0

Q ss_pred             CCCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCCh
Q 018834           31 DLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL  109 (350)
Q Consensus        31 ~~~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~  109 (350)
                      ...+.|.++. +++|++||||||+++|++|.+|+.+|.++|+.++.|++|++|||+|.|+.||+|+|++++.+.. .+. 
T Consensus         6 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~-   83 (265)
T PLN02888          6 VSENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSGRAFCSGVDLTAAEEVF-KGD-   83 (265)
T ss_pred             CCCCeEEEEeccCCEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCcccCCCCHHHHHhhc-cch-
Confidence            3455788885 7899999999999999999999999999999999999999999999999999999999865321 111 


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834          110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                        ..   .....++..|.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..
T Consensus        84 --~~---~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~  158 (265)
T PLN02888         84 --VK---DVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIGAN  158 (265)
T ss_pred             --hh---HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhCHH
Confidence              11   1123456678899999999999999999999999999999999999999999999999999999999999998


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHh
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKC  266 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~  266 (350)
                       +++|++||++++|+||+++||||+++|++++.+.+..+ .+++..++.+++.+|+.++........... .+......+
T Consensus       159 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~  238 (265)
T PLN02888        159 RAREVSLTAMPLTAETAERWGLVNHVVEESELLKKAREVAEAIIKNNQGMVLRYKSVINDGLKLDLGHALQLEKERAHDY  238 (265)
T ss_pred             HHHHHHHhCCccCHHHHHHcCCccEeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Confidence             99999999999999999999999999988876654444 678889999999999999865433322222 233445555


Q ss_pred             c---CcCCHHHHHHHHhccCCCC
Q 018834          267 F---GLDTVEEIIDSLESEASLI  286 (350)
Q Consensus       267 f---~~~~~~ei~~~lek~~~~~  286 (350)
                      +   +.+..+.+.++++|++|+.
T Consensus       239 ~~~~~~d~~e~~~af~ekr~~~~  261 (265)
T PLN02888        239 YNGMTKEQFQKMQEFIAGRSSKK  261 (265)
T ss_pred             hccCCHHHHHHHHHHHhcCCCCC
Confidence            3   5677777888899987643

>PRK07396 dihydroxynaphthoic acid synthetase; Validated

Probab=100.00  E-value=1e-47  Score=357.56  Aligned_cols=251  Identities=16%  Similarity=0.218  Sum_probs=207.9

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.+.++++++|++||||||++.|++|.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++.... ......
T Consensus        12 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~~~~~   90 (273)
T PRK07396         12 YEDILYKSADGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGG-YVDDDG   90 (273)
T ss_pred             CcceEEEecCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhccc-ccchhh
Confidence            45689999999999999999999999999999999999999999999999999999 7999999999864210 001111


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ... + ....++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus        91 ~~~-~-~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~~~a  168 (273)
T PRK07396         91 VPR-L-NVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQKKA  168 (273)
T ss_pred             hhh-h-HHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhHHHH
Confidence            111 1 134566778999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f-  267 (350)
                      ++|++||+.++|+||+++||||++||++++.+... .+.+++..+|.++..+|+.++..... ..... .+......++ 
T Consensus       169 ~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~~~~~~  247 (273)
T PRK07396        169 REIWFLCRQYDAQEALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDG-QAGLQELAGNATMLFYM  247 (273)
T ss_pred             HHHHHhCCCcCHHHHHHcCCcCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcc-HHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999988876544 44688899999999999998764332 22222 2334555666 


Q ss_pred             CcCCHHHHHHHHhccCCCCC
Q 018834          268 GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~  287 (350)
                      +.+..+.+.++++|++|.+.
T Consensus       248 ~~d~~egi~af~~kr~p~~~  267 (273)
T PRK07396        248 TEEAQEGRNAFNEKRQPDFS  267 (273)
T ss_pred             ChhHHHHHHHHhCCCCCCCC
Confidence            45666777788899887654

>PRK05870 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=5.7e-48  Score=354.88  Aligned_cols=242  Identities=20%  Similarity=0.314  Sum_probs=203.3

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.... ...   .
T Consensus         2 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~~~---~   77 (249)
T PRK05870          2 MDPVLLDVDDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAGKAFCAGADLTALGAAP-GRP---A   77 (249)
T ss_pred             CccEEEEccCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCeecCcChHHHhccc-ccc---h
Confidence            456889999999999999999999999999999999999999999999999999999999999999886421 111   1


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ...+...+.++..+.++||||||++||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus        78 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~  157 (249)
T PRK05870         78 EDGLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQVAR  157 (249)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHHHHH
Confidence            23445566677889999999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCC-CCcchH-HHHHHHHHHhcC
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVY-PDKNSV-IHRIDIVDKCFG  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~-~~~~~~-~~~~~~i~~~f~  268 (350)
                      +|++||++++|+||+++||||+++  +++.+ +.+.+.+++..+|.++...|+.++.... ...... ..+......+|.
T Consensus       158 ~l~ltg~~~~a~eA~~~Glv~~vv--~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~l~~~~~~e~~~~~~~~~  235 (249)
T PRK05870        158 AALLFGMRFDAEAAVRHGLALMVA--DDPVAAALELAAGPAAAPRELVLATKASMRATASLAQHAAAVEFELGPQAASVQ  235 (249)
T ss_pred             HHHHhCCccCHHHHHHcCCHHHHH--hhHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999  45554 4445578889999999999999987543 332222 224556667775


Q ss_pred             cC-CHHHHHHHHh
Q 018834          269 LD-TVEEIIDSLE  280 (350)
Q Consensus       269 ~~-~~~ei~~~le  280 (350)
                      .+ ..+.+.++++
T Consensus       236 ~~d~~eg~~af~~  248 (249)
T PRK05870        236 SPEFAARLAAAQR  248 (249)
T ss_pred             ChhHHHHHHHHhc
Confidence            54 4455555554

>PRK06210 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=8.6e-48  Score=358.24  Aligned_cols=254  Identities=22%  Similarity=0.297  Sum_probs=208.6

Q ss_pred             CCcEEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCCh--
Q 018834           33 CNQVLVEGKA-NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL--  109 (350)
Q Consensus        33 ~~~v~~~~~~-~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~--  109 (350)
                      ++.+.+++++ +|++||||||+++|++|.+|+.+|.++|+.++.|+++++|||+|.|+.||+|+|++++.........  
T Consensus         4 ~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~~~~~~~~   83 (272)
T PRK06210          4 YDAVLYEVADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAGRGFCAGADMGELQTIDPSDGRRD   83 (272)
T ss_pred             cceEEEEECCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCCCCcccccCHHHHhccCccccccc
Confidence            3568999988 9999999999999999999999999999999999999999999999999999999987542110000  


Q ss_pred             HHHHHH----HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhc
Q 018834          110 EECKDF----FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL  185 (350)
Q Consensus       110 ~~~~~~----~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl  185 (350)
                      .....+    .....+++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~  163 (272)
T PRK06210         84 TDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWILPRL  163 (272)
T ss_pred             ccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhhhHhh
Confidence            000111    1122445678899999999999999999999999999999999999999999999999999999999999


Q ss_pred             cHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccC-CHHHHHHHHHHHhccCCCCcch-HHHHHH
Q 018834          186 PGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTD-DPSVIEACLEKYSDLVYPDKNS-VIHRID  261 (350)
Q Consensus       186 ~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~-~~~~i~~~~~~~~~~~~~~~~~-~~~~~~  261 (350)
                      +|.. +++|+|||++++|+||+++||||+++|++++.+...++ .+++.. +|.++...|+.++......... ...+..
T Consensus       164 ig~~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e~~  243 (272)
T PRK06210        164 VGHANALDLLLSARTFYAEEALRLGLVNRVVPPDELMERTLAYAEDLARNVSPASMAVIKRQLYEDAFQTLAEATARANR  243 (272)
T ss_pred             hCHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcccCCHHHHHHHHHH
Confidence            9988 99999999999999999999999999988876544444 667764 8999999999988654333222 223345


Q ss_pred             HHHHhc-CcCCHHHHHHHHhccCCCC
Q 018834          262 IVDKCF-GLDTVEEIIDSLESEASLI  286 (350)
Q Consensus       262 ~i~~~f-~~~~~~ei~~~lek~~~~~  286 (350)
                      .+..+| +.+..+++.++++|++|.+
T Consensus       244 ~~~~~~~~~~~~egi~af~~kr~p~~  269 (272)
T PRK06210        244 EMHESLQRPDFIEGVASFLEKRPPRF  269 (272)
T ss_pred             HHHHHhcCccHHHHHHHHhccCCCCC
Confidence            566666 4667777778889887765

>PRK11423 methylmalonyl-CoA decarboxylase; Provisional

Probab=100.00  E-value=2e-47  Score=353.42  Aligned_cols=249  Identities=17%  Similarity=0.195  Sum_probs=209.2

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcC-C-CccccCCChhhHHHhhhcCChH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-G-RAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~-g-~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ++.+.++.+++|++||||||+++|+||.+|+.+|.++++.++.|+ +++|||+|. + ++||+|+|++++...  ...  
T Consensus         3 ~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~--~~~--   77 (261)
T PRK11423          3 MQYVNVVTINKIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSG--GRD--   77 (261)
T ss_pred             ccceEEEeECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhc--ccc--
Confidence            346889999999999999999999999999999999999999988 999999996 3 899999999987532  111  


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                       ...+....++++..|..+||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|.. 
T Consensus        78 -~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~vg~~~  156 (261)
T PRK11423         78 -PLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDAGFHI  156 (261)
T ss_pred             -HHHHHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHhHHHH
Confidence             123344556788889999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCC-CCc-chHHH-HHHHHHH
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVY-PDK-NSVIH-RIDIVDK  265 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~-~~~-~~~~~-~~~~i~~  265 (350)
                      +++|++||++++|+||+++||||+++|++++.+.... +.+++..+|.++...|+.++.... ... ..... .......
T Consensus       157 a~~l~l~g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (261)
T PRK11423        157 VKEMFFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEQLRVLGEAHPMNPDEFERIQGLRRA  236 (261)
T ss_pred             HHHHHHcCCCcCHHHHHHcCCcCcccCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHH
Confidence            9999999999999999999999999998888765544 467888999999999999875322 111 12222 3445567


Q ss_pred             hc-CcCCHHHHHHHHhccCCCCC
Q 018834          266 CF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      +| +.+..+.+.++++|++|.+.
T Consensus       237 ~~~s~d~~eg~~af~~kr~p~~~  259 (261)
T PRK11423        237 VYDSEDYQEGMNAFLEKRKPVFV  259 (261)
T ss_pred             HhCChhHHHHHHHHhccCCCCCC
Confidence            77 46777778888999877653

>PRK08259 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=9.8e-48  Score=354.10  Aligned_cols=244  Identities=23%  Similarity=0.239  Sum_probs=201.6

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      .+.+.++++++|++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++...  ... . .
T Consensus         2 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g~~FcaG~Dl~~~~~~--~~~-~-~   77 (254)
T PRK08259          2 SMSVRVERNGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAGGTFCAGADLKAVGTG--RGN-R-L   77 (254)
T ss_pred             CceEEEEEECCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcChHHHhcc--cch-h-h
Confidence            45689999999999999999999999999999999999999999999999999999999999999987532  111 1 1


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ...  ....+...+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus        78 ~~~--~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~~a~  155 (254)
T PRK08259         78 HPS--GDGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAM  155 (254)
T ss_pred             hhh--hcchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHHHHH
Confidence            100  001112223479999999999999999999999999999999999999999999999999999999999998 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhcCc
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFGL  269 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f~~  269 (350)
                      +|+++|++++|+||+++||||++||++++.+.+..+ .+++..++.++..+|+.++........... .+......++..
T Consensus       156 ~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~~~~e~~~~~~~~~~  235 (254)
T PRK08259        156 DLILTGRPVDADEALAIGLANRVVPKGQARAAAEELAAELAAFPQTCLRADRLSALEQWGLPEEAALANEFAHGLAVLAA  235 (254)
T ss_pred             HHHHcCCccCHHHHHHcCCCCEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999887655444 689999999999999999865433322222 233334455566


Q ss_pred             CCHHHHHHHHhcc
Q 018834          270 DTVEEIIDSLESE  282 (350)
Q Consensus       270 ~~~~ei~~~lek~  282 (350)
                      +..+++.+|+++.
T Consensus       236 d~~egi~af~~~~  248 (254)
T PRK08259        236 EALEGAARFAAGA  248 (254)
T ss_pred             HHHHHHHHHHhhh
Confidence            7777788888765

>PRK06072 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.3e-47  Score=349.52  Aligned_cols=243  Identities=24%  Similarity=0.322  Sum_probs=204.6

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      |.++++++|++||||||+++|++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++...    .   ...+
T Consensus         2 i~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g~~F~aG~Dl~~~~~~----~---~~~~   74 (248)
T PRK06072          2 IKVESREGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEGRAFCVGADLSEFAPD----F---AIDL   74 (248)
T ss_pred             eEEEEECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCcccCcCHHHHhhh----h---HHHH
Confidence            56788999999999999999999999999999999999999999999999999999999999987531    1   1223


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhh
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLAL  195 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~l  195 (350)
                      .+..+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++|..++++++
T Consensus        75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g~~a~~lll  154 (248)
T PRK06072         75 RETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTGQRFYEILV  154 (248)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhhHHHHHHHH
Confidence            34456677889999999999999999999999999999999999999999999999999999999999999977999999


Q ss_pred             cCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhcC-cCCHH
Q 018834          196 TGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFG-LDTVE  273 (350)
Q Consensus       196 tG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f~-~~~~~  273 (350)
                      ||++++|+||+++|||+.+ + +.++++.+.+.+++..++.++..+|+.++........... .+......+|. .+..+
T Consensus       155 ~g~~~~a~eA~~~Glv~~~-~-~~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~e  232 (248)
T PRK06072        155 LGGEFTAEEAERWGLLKIS-E-DPLSDAEEMANRISNGPFQSYIAAKRMINLVLYNDLEEFLEYESAIQGYLGKTEDFKE  232 (248)
T ss_pred             hCCccCHHHHHHCCCcccc-c-hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhCChhHHH
Confidence            9999999999999999963 2 3344555556788889999999999998765333322222 23556667774 56677


Q ss_pred             HHHHHHhccCCCCC
Q 018834          274 EIIDSLESEASLIN  287 (350)
Q Consensus       274 ei~~~lek~~~~~~  287 (350)
                      .+.++++|++|.+.
T Consensus       233 g~~af~~kr~p~~~  246 (248)
T PRK06072        233 GISSFKEKREPKFK  246 (248)
T ss_pred             HHHHHhcCCCCCCC
Confidence            78888899877653

>PRK06495 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=3.6e-47  Score=351.15  Aligned_cols=250  Identities=22%  Similarity=0.310  Sum_probs=208.2

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +++.|.++++++|++||||||+ .|++|.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++....  .....
T Consensus         2 ~~~~i~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~FcaG~Dl~~~~~~~--~~~~~   78 (257)
T PRK06495          2 MMSQLKLEVSDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAGKVFCAGADLKGRPDVI--KGPGD   78 (257)
T ss_pred             CcceEEEEeeCCEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcCHHhHhhcc--CCchh
Confidence            3456889999999999999998 59999999999999999999999999999999999999999999875421  11122


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...+....+++...+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|+.   |++++|++++|.. +
T Consensus        79 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~~~a  155 (257)
T PRK06495         79 LRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGHSLT  155 (257)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCHHHH
Confidence            23344555677888999999999999999999999999999999999999999999999996   5678899999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f-  267 (350)
                      ++|+++|++++|+||+++|||++++|++++.+. .+.+.+++..+|.++..+|+.+............ .+...+..++ 
T Consensus       156 ~~lll~g~~~~a~eA~~~GLv~~vv~~~~~~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~  235 (257)
T PRK06495        156 RRMMLTGYRVPAAELYRRGVIEACLPPEELMPEAMEIAREIASKSPLATRLAKDALNTIENMSLRDGYRYEQDITAKLAK  235 (257)
T ss_pred             HHHHHcCCeeCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999887654 4455788899999999999998865333322222 2345566666 


Q ss_pred             CcCCHHHHHHHHhccCCCCC
Q 018834          268 GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~  287 (350)
                      +.+..+.+.++++|++|.+.
T Consensus       236 s~d~~egi~af~~kr~p~~~  255 (257)
T PRK06495        236 TEDAKEAQRAFLEKRPPVFK  255 (257)
T ss_pred             ChHHHHHHHHHhccCCCCCC
Confidence            45667777788899887653

>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase

Probab=100.00  E-value=4.6e-47  Score=348.96  Aligned_cols=242  Identities=20%  Similarity=0.261  Sum_probs=202.6

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      |.++++++|++||||||+ .|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..       .....+
T Consensus         3 v~~~~~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g~~FcaG~Dl~~~~~-------~~~~~~   74 (251)
T TIGR03189         3 VWLERDGKLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEGPHFSFGASVAEHMP-------DQCAAM   74 (251)
T ss_pred             EEEEeeCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCCCceecCcChhhhCc-------hhHHHH
Confidence            678889999999999997 599999999999999999999999999999999999999999997531       111234


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA  194 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~  194 (350)
                      +....+++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+ |++++|++++|.. +++|+
T Consensus        75 ~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~-~~~~~l~~~vg~~~a~~l~  153 (251)
T TIGR03189        75 LASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAP-AASCLLPERMGRVAAEDLL  153 (251)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCC-chHHHHHHHhCHHHHHHHH
Confidence            445567888899999999999999999999999999999999999999999999999997 4678999999988 99999


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH--HHHHHHHHhcC-cC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI--HRIDIVDKCFG-LD  270 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~i~~~f~-~~  270 (350)
                      |||++++|+||+++|||++++|+.+ +...+.+ .+++..+|.++..+|+.++...........  .+...+..+|. .+
T Consensus       154 ltg~~~~a~eA~~~Glv~~v~~~~~-~~a~~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~~e~~~~~~~~~s~d  232 (251)
T TIGR03189       154 YSGRSIDGAEGARIGLANAVAEDPE-NAALAWFDEHPAKLSASSLRFAVRAARLGMNERVKAKIAEVEALYLEELMATHD  232 (251)
T ss_pred             HcCCCCCHHHHHHCCCcceecCcHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHhCCHh
Confidence            9999999999999999999998643 3444444 678889999999999998765433322222  23445667774 56


Q ss_pred             CHHHHHHHHhccCCCCC
Q 018834          271 TVEEIIDSLESEASLIN  287 (350)
Q Consensus       271 ~~~ei~~~lek~~~~~~  287 (350)
                      ..+.+.++++|++|.|.
T Consensus       233 ~~eg~~af~ekr~p~~~  249 (251)
T TIGR03189       233 AVEGLNAFLEKRPALWE  249 (251)
T ss_pred             HHHHHHHHHhcCCCCCC
Confidence            67778888999987653

This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.

>PRK07854 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=4.3e-47  Score=347.65  Aligned_cols=237  Identities=21%  Similarity=0.298  Sum_probs=200.4

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      +.++++++|++||||||++.|+||.+|+.+|.+++++++.| ++++|||||.|+.||+|+|+++...         ...+
T Consensus         2 ~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g~~F~aG~Dl~~~~~---------~~~~   71 (243)
T PRK07854          2 IGVTRDGQVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQGTVFCAGADLSGDVY---------ADDF   71 (243)
T ss_pred             ceEEEeCCEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCCCceecccCCccchh---------HHHH
Confidence            56788899999999999999999999999999999999865 8999999999999999999985211         1223


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA  194 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~  194 (350)
                      ....++++..+.++|||+||++||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. +++|+
T Consensus        72 ~~~~~~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~~a~~l~  151 (243)
T PRK07854         72 PDALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGGRARAML  151 (243)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHHHHHHHH
Confidence            44456678889999999999999999999999999999999999999999999999999999999999999998 99999


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcC-cCCHH
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-LDTVE  273 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~-~~~~~  273 (350)
                      +||++++|+||+++|||+++++   ++++.+.+++++..++.++...|+.++.. .........+......+|. .+..+
T Consensus       152 ltg~~~~a~eA~~~Glv~~v~~---~~~a~~~a~~l~~~~~~a~~~~K~~l~~~-~~~~~~~~~e~~~~~~~~~~~d~~e  227 (243)
T PRK07854        152 LGAEKLTAEQALATGMANRIGT---LADAQAWAAEIAGLAPLALQHAKRVLNDD-GAIEEAWPAHKELFDKAWASQDAIE  227 (243)
T ss_pred             HcCCCcCHHHHHHCCCcccccC---HHHHHHHHHHHHhCCHHHHHHHHHHHHcc-CCHHHHHHHHHHHHHHHhcCchHHH
Confidence            9999999999999999999975   34555556788889999999999998764 2111122223556677774 56666


Q ss_pred             HHHHHHhccCCCC
Q 018834          274 EIIDSLESEASLI  286 (350)
Q Consensus       274 ei~~~lek~~~~~  286 (350)
                      .+.++++|++|.+
T Consensus       228 g~~af~~kr~p~~  240 (243)
T PRK07854        228 AQVARIEKRPPKF  240 (243)
T ss_pred             HHHHHhCCCCCCC
Confidence            6778888887754

>PRK07827 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=6.2e-47  Score=350.16  Aligned_cols=251  Identities=21%  Similarity=0.209  Sum_probs=208.4

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ...+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.... ....+..
T Consensus         5 ~~~i~~~~~~~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~   83 (260)
T PRK07827          5 DTLVRYAVDGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTGGTFCAGADLSEAGGGG-GDPYDAA   83 (260)
T ss_pred             CcceEEEeeCCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCCCCccCCcChHHHhhcc-cCchhHH
Confidence            346888999999999999999999999999999999999999999999999999999999999999875421 1111222


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF  192 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~  192 (350)
                      ..++....++++.+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++++++..+++
T Consensus        84 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~~~a~~  163 (260)
T PRK07827         84 VARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSPRAAAR  163 (260)
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhHHHHHH
Confidence            34556667788899999999999999999999999999999999999999999999999999999999999987766999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcC-c
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFG-L  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~-~  269 (350)
                      |+++|++++|+||+++|||+++++  ++++. .+.+.+++..++.++..+|+.++.......... .........+|. .
T Consensus       164 l~l~g~~~~a~eA~~~Glv~~v~~--~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (260)
T PRK07827        164 YYLTGEKFGAAEAARIGLVTAAAD--DVDAAVAALLADLRRGSPQGLAESKALTTAAVLAGFDRDAEELTEESARLFVSD  241 (260)
T ss_pred             HHHhCCccCHHHHHHcCCcccchH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCh
Confidence            999999999999999999999975  36544 444568888899999999999987544332222 223455666774 5


Q ss_pred             CCHHHHHHHHhccCCCC
Q 018834          270 DTVEEIIDSLESEASLI  286 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~  286 (350)
                      +..+.+.++++|+.|.+
T Consensus       242 ~~~~~~~af~~kr~p~~  258 (260)
T PRK07827        242 EAREGMTAFLQKRPPRW  258 (260)
T ss_pred             hHHHHHHHHhcCCCCCC
Confidence            66666777788876654

>PLN02921 naphthoate synthase

Probab=100.00  E-value=4.5e-47  Score=359.85  Aligned_cols=252  Identities=17%  Similarity=0.223  Sum_probs=209.8

Q ss_pred             CCCcEEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCC
Q 018834           32 LCNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK  108 (350)
Q Consensus        32 ~~~~v~~~~--~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~  108 (350)
                      .++.|.+++  +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... ...
T Consensus        63 ~~~~i~~~~~~~~~Va~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~-~~~  141 (327)
T PLN02921         63 EFTDIIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDG-YVG  141 (327)
T ss_pred             CCceEEEEEecCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhccc-ccc
Confidence            456788887  589999999999999999999999999999999999999999999999 8999999999864210 011


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834          109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       109 ~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      .+....+  ...+++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.
T Consensus       142 ~~~~~~~--~~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG~  219 (327)
T PLN02921        142 PDDAGRL--NVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVGQ  219 (327)
T ss_pred             hhHHHHH--HHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhCH
Confidence            1111111  12456778899999999999999999999999999999999999999999999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchHHH-HHHHHHH
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-RIDIVDK  265 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~i~~  265 (350)
                      . +++|++||+.++|+||+++|||++++|++++.+... .+.+++..++.+++.+|+.++..... ...... ....+..
T Consensus       220 ~~A~ellltG~~~~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~al~~~K~~l~~~~~~-~~~~~~~~~~~~~~  298 (327)
T PLN02921        220 KKAREMWFLARFYTASEALKMGLVNTVVPLDELEGETVKWCREILRNSPTAIRVLKSALNAADDG-HAGLQELGGNATLL  298 (327)
T ss_pred             HHHHHHHHcCCcCCHHHHHHCCCceEEeCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhhcc-hhHHHHHHHHHHHH
Confidence            8 999999999999999999999999999988876544 44689999999999999998765332 222222 2355666


Q ss_pred             hc-CcCCHHHHHHHHhccCCCCC
Q 018834          266 CF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      +| +.+..+++.+|++|++|.|.
T Consensus       299 ~~~s~d~~egi~Af~ekr~p~f~  321 (327)
T PLN02921        299 FYGSEEGNEGRTAYLEGRAPDFS  321 (327)
T ss_pred             HhcCHHHHHHHHHHhccCCCCCC
Confidence            67 56777778888999988754

>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix

Probab=100.00  E-value=1e-47  Score=352.60  Aligned_cols=241  Identities=30%  Similarity=0.480  Sum_probs=212.2

Q ss_pred             EEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHH
Q 018834           37 LVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFF  116 (350)
Q Consensus        37 ~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~  116 (350)
                      .++.+++|++|+||||++.|++|.+|+.+|.++|+.++.|+++++||++|.++.||+|+|++++...    +.+....+.
T Consensus         1 ~~~~~~~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~~~F~~G~Dl~~~~~~----~~~~~~~~~   76 (245)
T PF00378_consen    1 KYEIEDGVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGGKAFCAGADLKEFLNS----DEEEAREFF   76 (245)
T ss_dssp             EEEEETTEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEESTSESBESB-HHHHHHH----HHHHHHHHH
T ss_pred             CEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecccccccccchhhhhcc----ccccccccc
Confidence            4788999999999999999999999999999999999999999999999999999999999998865    345567788


Q ss_pred             HHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhh
Q 018834          117 RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLAL  195 (350)
Q Consensus       117 ~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~l  195 (350)
                      +..+.++..+..+|||+||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. ++++++
T Consensus        77 ~~~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~~a~~l~l  156 (245)
T PF00378_consen   77 RRFQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPSRARELLL  156 (245)
T ss_dssp             HHHHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccccccchhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeeccccccccc
Confidence            8899999999999999999999999999999999999999999999999999999999999999999999998 999999


Q ss_pred             cCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCc-chHHHHHHHHHHhcC-cCCH
Q 018834          196 TGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDK-NSVIHRIDIVDKCFG-LDTV  272 (350)
Q Consensus       196 tG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~i~~~f~-~~~~  272 (350)
                      ||++++|+||+++||||+++|++++.+.. +.+.+++..++.++...|+.++....... .........+..++. .+..
T Consensus       157 ~g~~~~a~eA~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (245)
T PF00378_consen  157 TGEPISAEEALELGLVDEVVPDEELDEEALELAKRLAAKPPSALRATKKALNRALEQSLEEALEFEQDLFAECFKSEDFQ  236 (245)
T ss_dssp             HTCEEEHHHHHHTTSSSEEESGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred             ccccchhHHHHhhcceeEEcCchhhhHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCHHHH
Confidence            99999999999999999999999987654 44578899999999999999987533222 223334667777884 5666


Q ss_pred             HHHHHHHhc
Q 018834          273 EEIIDSLES  281 (350)
Q Consensus       273 ~ei~~~lek  281 (350)
                      +.+.+++||
T Consensus       237 e~~~~f~eK  245 (245)
T PF00378_consen  237 EGIAAFLEK  245 (245)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHhCc
Confidence            667677775

Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....

>PRK08321 naphthoate synthase; Validated

Probab=100.00  E-value=9.5e-47  Score=355.48  Aligned_cols=255  Identities=15%  Similarity=0.160  Sum_probs=207.3

Q ss_pred             CCcEEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-------CccccCCChhhHHHh
Q 018834           33 CNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-------RAFCAGGDIVSLYHF  103 (350)
Q Consensus        33 ~~~v~~~~--~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-------~~F~aG~Dl~~~~~~  103 (350)
                      +.++.+++  +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|       ++||+|+|++++...
T Consensus        22 ~~~i~~~~~~~~~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~  101 (302)
T PRK08321         22 FTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRD  101 (302)
T ss_pred             ceeEEEEEecCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccc
Confidence            34688888  899999999999999999999999999999999999999999999998       599999999976321


Q ss_pred             h---hcCCh-H--HHHHHH-HHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEe-CCeeEecccccccccCC
Q 018834          104 M---NQGKL-E--ECKDFF-RTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPD  175 (350)
Q Consensus       104 ~---~~~~~-~--~~~~~~-~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riat-e~a~f~~Pe~~iGl~P~  175 (350)
                      .   ..... .  ...... ...+.+...+..+||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+
T Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~  181 (302)
T PRK08321        102 GYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDG  181 (302)
T ss_pred             cccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCC
Confidence            0   00000 0  001111 112346667889999999999999999999999999999999 69999999999999999


Q ss_pred             CchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCc
Q 018834          176 AGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDK  253 (350)
Q Consensus       176 ~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~  253 (350)
                      +|++++|+|++|.. +++|++||+.++|+||+++|||+++||++++.+... .+.+++..++.+++.+|+.++.......
T Consensus       182 ~~~~~~L~r~vG~~~A~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~  261 (302)
T PRK08321        182 GYGSAYLARQVGQKFAREIFFLGRTYSAEEAHDMGAVNAVVPHAELETEALEWAREINGKSPTAMRMLKYAFNLTDDGLV  261 (302)
T ss_pred             chHHHHHHHHhCHHHHHHHHHcCCccCHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcccH
Confidence            99999999999998 999999999999999999999999999988876544 4468889999999999999876433222


Q ss_pred             chHHHHHHHHHHhcC-cCCHHHHHHHHhccCCCCC
Q 018834          254 NSVIHRIDIVDKCFG-LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       254 ~~~~~~~~~i~~~f~-~~~~~ei~~~lek~~~~~~  287 (350)
                      .....+......+|. .+..+.+.++++|++|.+.
T Consensus       262 ~~~~~e~~~~~~~~~~~d~~egi~af~ekr~p~~~  296 (302)
T PRK08321        262 GQQLFAGEATRLAYMTDEAQEGRDAFLEKRDPDWS  296 (302)
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHhccCCCCCC
Confidence            222233455666774 5667778888999887653

>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=100.00  E-value=1.3e-46  Score=345.75  Aligned_cols=240  Identities=20%  Similarity=0.223  Sum_probs=205.1

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.++++++++|++|+||||++.|++|.+|+.+|.+++++++.|+++++|||+|.|+.||+|+|++++.... . . .  
T Consensus         4 ~~~~~~~~~~~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g~~F~aG~Dl~~~~~~~-~-~-~--   78 (249)
T PRK07110          4 KVVELREVEEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYPNYFATGGTQEGLLSLQ-T-G-K--   78 (249)
T ss_pred             CceEEEEeeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCcChHHHhhcc-c-h-h--
Confidence            457889999999999999999999999999999999999999999999999999999999999999875421 1 1 1  


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      .. +.. +.++..+.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +.
T Consensus        79 ~~-~~~-~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~~~a~  156 (249)
T PRK07110         79 GT-FTE-ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGLALGQ  156 (249)
T ss_pred             hh-Hhh-HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCHHHHH
Confidence            11 222 5678889999999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcCc
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFGL  269 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~~  269 (350)
                      +|++||++++++||+++|||++++|++++.+ +.+.+.+++..++.++...|+.++.......... ..+...+..+|..
T Consensus       157 ~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~  236 (249)
T PRK07110        157 EMLLTARYYRGAELKKRGVPFPVLPRAEVLEKALELARSLAEKPRHSLVLLKDHLVADRRRRLPEVIEQEVAMHEKTFHQ  236 (249)
T ss_pred             HHHHcCCccCHHHHHHcCCCeEEeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999888765 4555578889999999999999986544333222 2335566777776


Q ss_pred             CCHHHHHHHH
Q 018834          270 DTVEEIIDSL  279 (350)
Q Consensus       270 ~~~~ei~~~l  279 (350)
                      ++..+.++.|
T Consensus       237 ~~~~egi~~~  246 (249)
T PRK07110        237 PEVKRRIESL  246 (249)
T ss_pred             HhHHHHHHHh
Confidence            6666666554

>PRK06190 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.3e-46  Score=345.38  Aligned_cols=212  Identities=25%  Similarity=0.308  Sum_probs=189.2

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.+.++.+++|++||||||++.|++|.+|+.+|.++++.++.|++|++|||+|.|+.||+|+|++++...    ..+..
T Consensus         3 ~~~v~~~~~~~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~----~~~~~   78 (258)
T PRK06190          3 EPILLVETHDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGADPAFCAGLDLKELGGD----GSAYG   78 (258)
T ss_pred             CceEEEEeeCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcc----cchhh
Confidence            34689999999999999999999999999999999999999999999999999999999999999987532    11111


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      .  ....+.++..|.++|||+||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        79 ~--~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~  156 (258)
T PRK06190         79 A--QDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVGIGRAR  156 (258)
T ss_pred             H--HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhCHHHHH
Confidence            1  22345677889999999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCC
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVY  250 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~  250 (350)
                      +|++||++++|+||+++||||+++|++++.+.+. .+.+++..+|.+++..|+.++....
T Consensus       157 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~  216 (258)
T PRK06190        157 RMSLTGDFLDAADALRAGLVTEVVPHDELLPRARRLAASIAGNNPAAVRALKASYDDGAA  216 (258)
T ss_pred             HHHHhCCccCHHHHHHcCCCeEecCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhc
Confidence            9999999999999999999999999888776444 4468889999999999999986543

>PRK07938 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.4e-46  Score=345.42  Aligned_cols=239  Identities=22%  Similarity=0.198  Sum_probs=198.4

Q ss_pred             EEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHH
Q 018834           39 EGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT  118 (350)
Q Consensus        39 ~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~  118 (350)
                      +++++|++||||||++ |+||.+|+.+|.++++.++.|++||+|||+|.|++||+|+|++++...   ........+.+.
T Consensus         7 ~~~~~v~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~---~~~~~~~~~~~~   82 (249)
T PRK07938          7 TPEPGIAEVTVDYPPV-NALPSAGWFALADAITAAGADPDTRVVVLRAEGRGFNAGVDIKELQAT---PGFTALIDANRG   82 (249)
T ss_pred             ccCCCEEEEEECCCCc-ccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCCCceecCcCHHHHhhc---cchhHHHHHHHH
Confidence            4578999999999985 999999999999999999999999999999999999999999987532   111222223344


Q ss_pred             HHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhcC
Q 018834          119 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTG  197 (350)
Q Consensus       119 ~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ltG  197 (350)
                      ...++..|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++   |++++|+|++|.. +++|++||
T Consensus        83 ~~~~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~~a~~l~ltg  159 (249)
T PRK07938         83 CFAAFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQHLMRALFFTA  159 (249)
T ss_pred             HHHHHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHHHHHHHHHhC
Confidence            4567788999999999999999999999999999999999999999999999985   5678899999988 99999999


Q ss_pred             CCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcC-cCCHHH
Q 018834          198 AKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFG-LDTVEE  274 (350)
Q Consensus       198 ~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~-~~~~~e  274 (350)
                      ++++|+||+++|||+++||++++.+.... +.+++..++.++..+|+.++.......... ..+......+|. .+..++
T Consensus       160 ~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~~~d~~eg  239 (249)
T PRK07938        160 ATITAAELHHFGSVEEVVPRDQLDEAALEVARKIAAKDTRVIRAAKEALNGIDPQDVERSYRWEQGFTFELNLAGVSDEH  239 (249)
T ss_pred             CcCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHhcCccHHHH
Confidence            99999999999999999999888765444 468889999999999999976533322222 223556667774 566677


Q ss_pred             HHHHHhccCC
Q 018834          275 IIDSLESEAS  284 (350)
Q Consensus       275 i~~~lek~~~  284 (350)
                      +.+|++|++|
T Consensus       240 ~~af~ekr~p  249 (249)
T PRK07938        240 RDAFVEKRKA  249 (249)
T ss_pred             HHHHHhcCCC
Confidence            7788888753

>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional

Probab=100.00  E-value=4e-46  Score=347.37  Aligned_cols=249  Identities=18%  Similarity=0.204  Sum_probs=204.5

Q ss_pred             CCCCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC--CccccCCChhhHHHhhhcC
Q 018834           31 DLCNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG--RAFCAGGDIVSLYHFMNQG  107 (350)
Q Consensus        31 ~~~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g--~~F~aG~Dl~~~~~~~~~~  107 (350)
                      .....|.+++ +++|++||||||+ .|+||.+|+.+|.+++++++.|+++++|||||.|  ++||+|+|++++...  ..
T Consensus         8 ~~~~~i~~~~~~~~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~--~~   84 (278)
T PLN03214          8 GATPGVRVDRRPGGIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAP--KT   84 (278)
T ss_pred             CCCCceEEEEcCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhcc--cc
Confidence            3455789998 6999999999985 6999999999999999999999999999999997  699999999987531  11


Q ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccc-cCCCchHHHHhhcc
Q 018834          108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF-HPDAGASFYLSHLP  186 (350)
Q Consensus       108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl-~P~~G~s~~L~rl~  186 (350)
                      ..+....+......++..|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|+ +|++|++++|++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~~  164 (278)
T PLN03214         85 SAARYAEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRVI  164 (278)
T ss_pred             chHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHhc
Confidence            11222334444456777899999999999999999999999999999999999999999999999 59999999999999


Q ss_pred             HHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHH
Q 018834          187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIV  263 (350)
Q Consensus       187 g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i  263 (350)
                      |.. +++|++||+.++|+||+++||||+++|++++.+.. +.+.+++..++.++..+|+.++......... ...+...+
T Consensus       165 G~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~  244 (278)
T PLN03214        165 DRKVAESLLLRGRLVRPAEAKQLGLIDEVVPAAALMEAAASAMERALKLPSAARAATKALLREEFSAAWEAYYEEEAKGG  244 (278)
T ss_pred             CHHHHHHHHHcCCccCHHHHHHcCCCcEecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence            988 99999999999999999999999999998876544 4446788999999999999988653322222 22234555


Q ss_pred             HHhcC-cCCHHHHHHHHhcc
Q 018834          264 DKCFG-LDTVEEIIDSLESE  282 (350)
Q Consensus       264 ~~~f~-~~~~~ei~~~lek~  282 (350)
                      ..++. .+..+.+.++++|.
T Consensus       245 ~~~~~s~d~~egi~aflek~  264 (278)
T PLN03214        245 WKMLSEPSIIKALGGVMERL  264 (278)
T ss_pred             HHHhCCHHHHHHHHHHHHHH
Confidence            66674 45556666667664

>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=100.00  E-value=5.5e-46  Score=342.74  Aligned_cols=249  Identities=18%  Similarity=0.224  Sum_probs=201.9

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.+.++++++|++||||||++.|++|.+|+.+|.++++.++  +++++|||+|.|++||+|+|++++.......  ...
T Consensus         3 ~~~i~~~~~~~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g~~FsaG~Dl~~~~~~~~~~--~~~   78 (255)
T PRK07112          3 YQTIRVRQQGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLPEVFCFGADFSAIAEKPDAG--RAD   78 (255)
T ss_pred             CceEEEEeeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCCCCcccCcCHHHHhhccccc--hhh
Confidence            356899999999999999999999999999999999999998  3699999999999999999999876421111  111


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      .......+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++| +.+|++++|.. ++
T Consensus        79 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~~~a~  157 (255)
T PRK07112         79 LIDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGTQKAH  157 (255)
T ss_pred             hhhHHHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCHHHHH
Confidence            11233446778889999999999999999999999999999999999999999999999999875 46789999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-CcC
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-GLD  270 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-~~~  270 (350)
                      +|++||+.++|+||+++||||+++|+++. ...+.+.+++..+|.++..+|+.+.............+......+| +.+
T Consensus       158 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~~-~~~~~a~~l~~~~p~a~~~~K~~~~~~~~~~~~~~~~e~~~~~~~~~~~~  236 (255)
T PRK07112        158 YMTLMTQPVTAQQAFSWGLVDAYGANSDT-LLRKHLLRLRCLNKAAVARYKSYASTLDDTVAAARPAALAANIEMFADPE  236 (255)
T ss_pred             HHHHhCCcccHHHHHHcCCCceecCcHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHcChH
Confidence            99999999999999999999999997653 3445557888889999999999887532211122222345556677 456


Q ss_pred             CHHHHHHHHhccCCCCC
Q 018834          271 TVEEIIDSLESEASLIN  287 (350)
Q Consensus       271 ~~~ei~~~lek~~~~~~  287 (350)
                      ..+.+.++++|++|.+.
T Consensus       237 ~~eg~~af~~kr~p~~~  253 (255)
T PRK07112        237 NLRKIARYVETGKFPWE  253 (255)
T ss_pred             HHHHHHHHHcCCCCCCC
Confidence            67777788898877653

>PRK12478 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=2.7e-46  Score=351.57  Aligned_cols=250  Identities=20%  Similarity=0.207  Sum_probs=198.8

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhh-HHH---hhh-cCC
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS-LYH---FMN-QGK  108 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~-~~~---~~~-~~~  108 (350)
                      +.+.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||||.|++||+|+|+++ +..   ... .+.
T Consensus         5 ~~v~~~~~~~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G~~FcaG~Dl~~~~~~~~~~~~~~~~   84 (298)
T PRK12478          5 QTLLYTTAGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAGRAFSGGYDFGGGFQHWGEAMMTDGR   84 (298)
T ss_pred             eEEEEeccCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcccCcCccccccccchhcccccc
Confidence            458899999999999999999999999999999999999999999999999999999999999986 211   000 000


Q ss_pred             hHHHHHH---HHHH---HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccc-cccCCCchHHH
Q 018834          109 LEECKDF---FRTL---YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI-GFHPDAGASFY  181 (350)
Q Consensus       109 ~~~~~~~---~~~~---~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~i-Gl~P~~G~s~~  181 (350)
                      ......+   ....   ..++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++ |++|  |+++ 
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~--~~~~-  161 (298)
T PRK12478         85 WDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL--TGMW-  161 (298)
T ss_pred             cCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--hhHH-
Confidence            0001111   1111   234567889999999999999999999999999999999999999999997 8875  3344 


Q ss_pred             HhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCC-C-CcchHH
Q 018834          182 LSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVY-P-DKNSVI  257 (350)
Q Consensus       182 L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~-~-~~~~~~  257 (350)
                      + +.+|.. +++|++||++++|+||+++|||+++||++++.+.+..+ .+++..+|.++...|+.++.... . ......
T Consensus       162 ~-~~vG~~~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~l~~~~~  240 (298)
T PRK12478        162 L-YRLSLAKVKWHSLTGRPLTGVQAAEAELINEAVPFERLEARVAEVATELARIPLSQLQAQKLIVNQAYENMGLASTQT  240 (298)
T ss_pred             H-HHhhHHHHHHHHHcCCccCHHHHHHcCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcchhHHHH
Confidence            3 447877 99999999999999999999999999999887655544 68889999999999999886433 1 222333


Q ss_pred             HHHHHHHHhcCcCCH---------HHHHHHHhccCCCCC
Q 018834          258 HRIDIVDKCFGLDTV---------EEIIDSLESEASLIN  287 (350)
Q Consensus       258 ~~~~~i~~~f~~~~~---------~ei~~~lek~~~~~~  287 (350)
                      .+...+..++..++.         +++.+|++|++|.|.
T Consensus       241 ~e~~~~~~~~~s~d~~e~~~~~~~egv~Af~ekR~p~f~  279 (298)
T PRK12478        241 LGGILDGLMRNTPDALEFIRTAETQGVRAAVERRDGPFG  279 (298)
T ss_pred             HHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHhcCCccc
Confidence            345667777765554         478899999987653

>PRK05869 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=6.2e-46  Score=335.33  Aligned_cols=209  Identities=21%  Similarity=0.303  Sum_probs=184.2

Q ss_pred             CcEEEEEe-----CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCC
Q 018834           34 NQVLVEGK-----ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK  108 (350)
Q Consensus        34 ~~v~~~~~-----~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~  108 (350)
                      +.|.++..     ++|++||||||++ |+||.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++....    
T Consensus         3 ~~~~~~~~~~~~~~~i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~----   77 (222)
T PRK05869          3 EFVNVVVSDGSQDAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGHEIFSAGDDMPELRTLS----   77 (222)
T ss_pred             cchhhhcccCcccCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCcCcCcCHHHHhccC----
Confidence            44555544     8999999999985 9999999999999999999999999999999999999999999875421    


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834          109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       109 ~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      ......+++...+++.++.++||||||++||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus        78 ~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~  157 (222)
T PRK05869         78 AQEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRAAGP  157 (222)
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHHhCH
Confidence            11222334445678889999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhc
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSD  247 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~  247 (350)
                      . ++++++||++++|+||+++||||+++|++++.+.... +++++..++.++..+|+.++.
T Consensus       158 ~~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~~~~  218 (222)
T PRK05869        158 SRAKELVFSGRFFDAEEALALGLIDEMVAPDDVYDAAAAWARRFLDGPPHALAAAKAGISD  218 (222)
T ss_pred             HHHHHHHHcCCCcCHHHHHHCCCCCEeeCchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            8 9999999999999999999999999999888764444 468889999999999988764

>PRK08788 enoyl-CoA hydratase; Validated

Probab=100.00  E-value=2.5e-44  Score=335.32  Aligned_cols=219  Identities=16%  Similarity=0.184  Sum_probs=176.1

Q ss_pred             CCcccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHc-----CCCceEEEEEcC-CCccccCCChhh
Q 018834           26 SSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWEN-----DPNIGFVSMKGS-GRAFCAGGDIVS   99 (350)
Q Consensus        26 ~~~~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~-----d~~v~~vvl~g~-g~~F~aG~Dl~~   99 (350)
                      |.+..-.+-.|.++.+++|++|||| |++.|+||.+|+.+|.+++++++.     |++|++|||+|. |+.||+|+|+++
T Consensus         9 ~~~~~~~~~~i~~e~~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~   87 (287)
T PRK08788          9 PEAGELSQLRVYYEEERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLAL   87 (287)
T ss_pred             ccccccCceEEEEEccCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHH
Confidence            3333334456777788999999996 999999999999999999999998     899999999999 799999999998


Q ss_pred             HHHhhhcCChHHHHHHHHHHHHHHHHHh---cCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCC
Q 018834          100 LYHFMNQGKLEECKDFFRTLYSFIYLLG---THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA  176 (350)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~---~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~  176 (350)
                      +......+..+....+.+..+..+..+.   .+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~  167 (287)
T PRK08788         88 FAELIRAGDRDALLAYARACVDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGM  167 (287)
T ss_pred             HhhhccccchHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCc
Confidence            7532111111211222233333333333   7999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccC--CHHHHHHHHHHH
Q 018834          177 GASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTD--DPSVIEACLEKY  245 (350)
Q Consensus       177 G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~--~~~~i~~~~~~~  245 (350)
                      |++++|++++|.. +++|++||+.++|+||+++||||+++|++++.+...+ +.+++..  ++..+...++..
T Consensus       168 g~~~~l~~~vG~~~A~ellltG~~l~A~eA~~~GLV~~vv~~~el~~~a~~~a~~ia~~~~~~~a~k~~~~~~  240 (287)
T PRK08788        168 GAYSFLARRVGPKLAEELILSGKLYTAEELHDMGLVDVLVEDGQGEAAVRTFIRKSKRKLNGWRAMLRARRRV  240 (287)
T ss_pred             hHHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecCchHHHHHHHHHHHHHhcCccHHHHHHHHHHhh
Confidence            9999999999988 9999999999999999999999999999888654444 4566654  334444455443

>PRK08290 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.8e-44  Score=337.80  Aligned_cols=211  Identities=22%  Similarity=0.249  Sum_probs=171.0

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhh-c-----
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-Q-----  106 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~-----  106 (350)
                      ++.+.++.+++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|+.||+|+|++++..... .     
T Consensus         3 ~~~v~~~~~~~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~   82 (288)
T PRK08290          3 YEYVRYEVAGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAGKHFSAGHDLGSGTPGRDRDPGPDQ   82 (288)
T ss_pred             CceEEEEeeCCEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCccccCCCcccccccccccccccc
Confidence            3458899999999999999999999999999999999999999999999999999999999999998632111 0     


Q ss_pred             -----------CC-hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccC
Q 018834          107 -----------GK-LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHP  174 (350)
Q Consensus       107 -----------~~-~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P  174 (350)
                                 .. .............+...|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|+ |
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~lGl-~  161 (288)
T PRK08290         83 HPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRMGI-P  161 (288)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCcccccCc-C
Confidence                       00 0011112233445677889999999999999999999999999999999999999999999998 5


Q ss_pred             CCchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHH
Q 018834          175 DAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKY  245 (350)
Q Consensus       175 ~~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~  245 (350)
                      + ++++++++++|.. +++|+|||+.++|+||+++|||+++||++++.+....+ .+++..++.++..+|+.+
T Consensus       162 ~-~~~~~l~~~iG~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~  233 (288)
T PRK08290        162 G-VEYFAHPWELGPRKAKELLFTGDRLTADEAHRLGMVNRVVPRDELEAETLELARRIAAMPPFGLRLTKRAV  233 (288)
T ss_pred             c-chHHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            4 4577789999988 99999999999999999999999999987766433333 344444444444444443

>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=100.00  E-value=3e-44  Score=372.83  Aligned_cols=279  Identities=18%  Similarity=0.255  Sum_probs=218.6

Q ss_pred             cEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        35 ~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      .+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++..... .......
T Consensus         7 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~~~~   85 (715)
T PRK11730          7 TLQVDWLEDGIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAKDAFIVGADITEFLSLFA-APEEELS   85 (715)
T ss_pred             eEEEEEcCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCCCccccCcCHHHHhhhcc-CCHHHHH
Confidence            567774 78999999999999999999999999999999999999999999999999999999998764211 1222334


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .+.+..++++.+|..+|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. +++
T Consensus        86 ~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~~A~~  165 (715)
T PRK11730         86 QWLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGADNALE  165 (715)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHHHHHH
Confidence            5566667788899999999999999999999999999999999999999999999999999999999999999988 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCC
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT  271 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~  271 (350)
                      |++||++++|+||+++||||+++|++++.+.+..+ .+++..+....     .... ....... .   ..+..++    
T Consensus       166 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~-----~~~~-~~~~p~a-~---~~~~~~~----  231 (715)
T PRK11730        166 WIAAGKDVRAEDALKVGAVDAVVAPEKLQEAALALLKQAIAGKLDWK-----ARRQ-PKLEPLK-L---SKIEAMM----  231 (715)
T ss_pred             HHHcCCcCCHHHHHHCCCCeEecCHHHHHHHHHHHHHHHhhcCCccc-----cccC-ccccccc-c---cchhHHH----
Confidence            99999999999999999999999998876554444 34443211000     0000 0000000 0   0000000    


Q ss_pred             HHHHHHHHhccCCCCCcHHHHHH-HHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCccc
Q 018834          272 VEEIIDSLESEASLINDPWCGST-LRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLL  347 (350)
Q Consensus       272 ~~ei~~~lek~~~~~~~~~a~~~-l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~~~  347 (350)
                         .+            .+.++. .++..+++|.++ .++++++++..   .+++++++.|.+.+..++.++|.+-.
T Consensus       232 ---~~------------~~~k~~~~~~~~~~~pa~~-~~~~~i~~~~~---~~~~~~l~~E~~~~~~~~~s~d~~eg  289 (715)
T PRK11730        232 ---SF------------TTAKGMVAQKAGKHYPAPM-TAVKTIEAAAG---LGRDEALELEAKGFVKLAKTNVARAL  289 (715)
T ss_pred             ---HH------------HHHHHHHHHhhccCCccHH-HHHHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence               00            111211 245577899888 55999999998   89999999999999999999987643

>PRK08272 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=8.7e-44  Score=335.75  Aligned_cols=214  Identities=20%  Similarity=0.231  Sum_probs=183.8

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcC--C-
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG--K-  108 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~--~-  108 (350)
                      .++.|.++.+++|++||||||+++|++|.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++.......  . 
T Consensus         8 ~~~~v~~e~~~~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G~~FcaG~Dl~~~~~~~~~~~~~~   87 (302)
T PRK08272          8 NLKTMTYEVTGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAGKGFCAGYDLSAYAEGSSSGGGGG   87 (302)
T ss_pred             CCCeEEEEeECCEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCcCHHHHhhccccccccc
Confidence            3567999999999999999999999999999999999999999999999999999999999999999986432100  0 


Q ss_pred             ----------------hH--HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccc
Q 018834          109 ----------------LE--ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLI  170 (350)
Q Consensus       109 ----------------~~--~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~i  170 (350)
                                      ..  ....++...++++..|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~~~  167 (302)
T PRK08272         88 AYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPTRV  167 (302)
T ss_pred             ccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcchhc
Confidence                            00  001234555677888999999999999999999999999999999999999999999998


Q ss_pred             cccCCCchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhcc
Q 018834          171 GFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDL  248 (350)
Q Consensus       171 Gl~P~~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~  248 (350)
                      |.+|..   ..+++++|.. +++|+|||++++|+||+++|||++++|++++.+....+ .+++..++.++...|+.++..
T Consensus       168 gg~~~~---~~~~~~vG~~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~la~~ia~~~~~a~~~~K~~l~~~  244 (302)
T PRK08272        168 WGVPAT---GMWAYRLGPQRAKRLLFTGDCITGAQAAEWGLAVEAVPPEELDERTERLVERIAAVPVNQLAMVKLAVNSA  244 (302)
T ss_pred             ccCChH---HHHHHHhhHHHHHHHHHcCCccCHHHHHHcCCCceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            666643   3567788888 99999999999999999999999999998887655554 678899999999999988764

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=100.00  E-value=1.2e-43  Score=354.49  Aligned_cols=248  Identities=13%  Similarity=0.083  Sum_probs=207.4

Q ss_pred             EEEEEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHHc-CCCceEEEEEcCCCc-cccCCChhhH
Q 018834           36 VLVEGKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSGRA-FCAGGDIVSL  100 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~-------------Nal~~~m~~~L~~~l~~~~~-d~~v~~vvl~g~g~~-F~aG~Dl~~~  100 (350)
                      +.++++++|++||||||+++             |+|+.+|+.+|.+++.+++. |++|++|||||.|+. ||+|+|++..
T Consensus       260 v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G~~~F~aG~Dl~~~  339 (546)
T TIGR03222       260 VAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQGDAELVLAADALLE  339 (546)
T ss_pred             EEEeccCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCCCCceecCcCcccc
Confidence            45567899999999999999             99999999999999999984 599999999999987 9999999842


Q ss_pred             HHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE-CCcccccc-cccccccCEEEE-------eCCeeEeccccccc
Q 018834          101 YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL-NGVTMGGG-AGVSIPGTFRVA-------CGKTVFATPETLIG  171 (350)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i-~G~~~GgG-~~Lal~~D~ria-------te~a~f~~Pe~~iG  171 (350)
                      .    ..+.......+....+++..|..+|||+||+| ||+|+||| ++|+++||+||+       +++++|++||+++|
T Consensus       340 ~----~~~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~~e~~lG  415 (546)
T TIGR03222       340 A----HKDHWFVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAITLSELNFG  415 (546)
T ss_pred             c----cccchhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEeCCccccc
Confidence            1    11111112233334457788999999999999 89999999 999999999999       89999999999999


Q ss_pred             ccCCCchHHHHhhcc-HHH-H--HHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHh
Q 018834          172 FHPDAGASFYLSHLP-GHL-G--EFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYS  246 (350)
Q Consensus       172 l~P~~G~s~~L~rl~-g~~-a--~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~  246 (350)
                      ++|++|++++|+|++ |.. +  +++++||++++|+||+++|||++++|++++.+ ..+.+.+++..+|.+++..|+.++
T Consensus       416 l~p~~gg~~~L~~~v~G~~~a~~~~~~ltg~~i~A~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~  495 (546)
T TIGR03222       416 LYPMVNGLSRLATRFYAEPAPVAAVRDKIGQALDAEEAERLGLVTAAPDDIDWEDEIRIALEERASFSPDALTGLEANLR  495 (546)
T ss_pred             cCCCcCcHHHHHHHhcCchhHHHHHHHHhCCCCCHHHHHHcCCcccccCchHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence            999999999999998 875 6  55999999999999999999999999988865 445557899999999999999888


Q ss_pred             ccCCCCcchH--HHHHHHHHHhcC-cCCHH---HHHHHHhccCCCCC
Q 018834          247 DLVYPDKNSV--IHRIDIVDKCFG-LDTVE---EIIDSLESEASLIN  287 (350)
Q Consensus       247 ~~~~~~~~~~--~~~~~~i~~~f~-~~~~~---ei~~~lek~~~~~~  287 (350)
                      .......+..  ..+.+++..+|. .+..+   ++.+|+||++|+|.
T Consensus       496 ~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~ekr~p~f~  542 (546)
T TIGR03222       496 FAGPETMETRIFGRLTAWQNWIFNRPNAVGENGALKVYGSGKKAQFD  542 (546)
T ss_pred             hcCCcChhhhHHHHHHHHHHHHhcCCcccchhhHHHHHccCCCCCCC
Confidence            7654433332  334777889995 56666   59999999998875

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB

Probab=100.00  E-value=1.5e-43  Score=366.92  Aligned_cols=281  Identities=17%  Similarity=0.255  Sum_probs=219.2

Q ss_pred             cEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        35 ~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      .+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++..... .......
T Consensus         7 ~i~~~~~~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~~~~~   85 (714)
T TIGR02437         7 TIQVTALEDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGKDAFIVGADITEFLGLFA-LPDAELI   85 (714)
T ss_pred             eEEEEEccCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCccccCcCHHHHhhccc-CCHHHHH
Confidence            567774 78999999999999999999999999999999999999999999999999999999999864211 1222333


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .+++..++++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.. +++
T Consensus        86 ~~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~~A~~  165 (714)
T TIGR02437        86 QWLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGADNALE  165 (714)
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHHHHHH
Confidence            4555567788899999999999999999999999999999999999999999999999999999999999999988 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHH-HhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCC
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG-KLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT  271 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~-~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~  271 (350)
                      |++||++++|+||+++||||+++|++++.+.+..+. ++....+.. .      ... .+......  ...+.+++.   
T Consensus       166 llltG~~~~A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~~~-~------~~~-~~~~~~~~--~~~~~~~~~---  232 (714)
T TIGR02437       166 WIASGKENRAEDALKVGAVDAVVTADKLGAAALQLLKDAINGKLDW-K------AKR-QPKLEPLK--LSKIEAMMS---  232 (714)
T ss_pred             HHHcCCcCCHHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCCcc-c------ccC-CCCccccc--ccchHHHHH---
Confidence            999999999999999999999999888776554443 222111000 0      000 00000000  000111110   


Q ss_pred             HHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCcccc
Q 018834          272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLF  348 (350)
Q Consensus       272 ~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~~~~  348 (350)
                          .+           .+.+...++..++.|...+. +++++++..   .+++++|+.|.+.|.+++.+|+++.|+
T Consensus       233 ----~~-----------~~~~~~~~~~~~~~pap~~~-~~~v~~~~~---~~~~~gl~~E~~~f~~l~~s~~a~~l~  290 (714)
T TIGR02437       233 ----FT-----------TAKGMVAQVAGPHYPAPMTA-VKTIEKAAR---FGRDKALEIEAKGFVKLAKTSEAKALI  290 (714)
T ss_pred             ----HH-----------HHHHHHHHhhcCCCCCHHHH-HHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence                00           11112334456677877666 899999999   899999999999999999999998874

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.

>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial

Probab=100.00  E-value=2.1e-43  Score=366.66  Aligned_cols=290  Identities=19%  Similarity=0.251  Sum_probs=214.1

Q ss_pred             CcEEEEEeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEE-EEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           34 NQVLVEGKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFV-SMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~v-vl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +.+.++++++|++||||||+ +.|+||.+|+.+|.++++.++.|++|++| |++|.|++||+|+|++++...   ...+.
T Consensus        13 ~~~~~~~~~gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g~~F~aG~Dl~~~~~~---~~~~~   89 (737)
T TIGR02441        13 THRHYEVKGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKPGSFVAGADIQMIAAC---KTAQE   89 (737)
T ss_pred             CeEEEEEECCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCCCcceeCcCHHHHhcc---CChHH
Confidence            45889999999999999998 68999999999999999999999999965 679999999999999998531   22233


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEecccccccccCCCchHHHHhhccHHH
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                      ...+.....+++.+|.++||||||+|||+|+|||++|+++||||||+++  ++|++||+++|++|++|++++|+|++|..
T Consensus        90 ~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Ggt~rLprliG~~  169 (737)
T TIGR02441        90 VTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGGTQRLPKLTGVP  169 (737)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccHhhhHHHhhCHH
Confidence            4455566678889999999999999999999999999999999999987  58999999999999999999999999987


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCC--CCh---H-HHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHH
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVS--EKL---P-LIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDI  262 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~--~~l---~-~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  262 (350)
                       +++|++||++++|++|+++||||+++|+  +++   + ++.+.+...+......+...+...+........ ..     
T Consensus       170 ~A~~l~ltG~~i~a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~~~~~~~~~~~~-~~-----  243 (737)
T TIGR02441       170 AALDMMLTGKKIRADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKLSINRDKGLVHK-IT-----  243 (737)
T ss_pred             HHHHHHHcCCcCCHHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcccCCccccccccCc-cc-----
Confidence             9999999999999999999999999986  222   1 112222211111111111101000000000000 00     


Q ss_pred             HHHhcCc-CCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhc
Q 018834          263 VDKCFGL-DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRR  341 (350)
Q Consensus       263 i~~~f~~-~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~  341 (350)
                       ...... .....+++..           .+...++.+.+.|...++ +++++.+..   .+++++|+.|.+.|.+++.+
T Consensus       244 -~~~~~~~~~~~~~~~~~-----------~~~~~~~~~g~~~Ap~~~-l~~v~~~~~---~~~~~gl~~E~~~f~~l~~s  307 (737)
T TIGR02441       244 -QYVMTNPFVRQQVYKTA-----------EDKVMKQTKGLYPAPLKI-LDVVRTGYD---QGPDAGYEAESKAFGELSMT  307 (737)
T ss_pred             -hhhcccchhHHHHHHHH-----------HHHHHHhccCCCccHHHH-HHHHHHHhc---CCHHHHHHHHHHHHHHHhCC
Confidence             000000 0011111111           112233334447877776 999999998   89999999999999999999


Q ss_pred             cCCcccc
Q 018834          342 HGGSLLF  348 (350)
Q Consensus       342 ~~~~~~~  348 (350)
                      |+++.|+
T Consensus       308 ~~a~al~  314 (737)
T TIGR02441       308 FESKALI  314 (737)
T ss_pred             HHHHHHH
Confidence            9999875

Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=100.00  E-value=3.6e-43  Score=352.16  Aligned_cols=252  Identities=13%  Similarity=0.059  Sum_probs=207.9

Q ss_pred             CCcEEE--EEeCCEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHHc-CCCceEEEEEcCC-CccccCC
Q 018834           33 CNQVLV--EGKANSRMAILNRPSAL-------------NALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSG-RAFCAGG   95 (350)
Q Consensus        33 ~~~v~~--~~~~~v~~ItLnrp~~~-------------Nal~~~m~~~L~~~l~~~~~-d~~v~~vvl~g~g-~~F~aG~   95 (350)
                      +.++.+  +++++|++||||||+++             |+||.+|+.+|.+++++++. |++||+|||||.| ++||+|+
T Consensus       259 ~~~~~v~~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG~  338 (550)
T PRK08184        259 YRHVDVEIDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLAA  338 (550)
T ss_pred             eEEEEEEEEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeCC
Confidence            334444  44689999999999988             68999999999999999986 7999999999999 5999999


Q ss_pred             ChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEC-Ccccccc-cccccccCEEEEe-------CCeeEecc
Q 018834           96 DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN-GVTMGGG-AGVSIPGTFRVAC-------GKTVFATP  166 (350)
Q Consensus        96 Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~-G~~~GgG-~~Lal~~D~riat-------e~a~f~~P  166 (350)
                      |++... .   .+.......+.....++.+|..+||||||+|| |+|+||| ++|+++||+|||+       ++++|++|
T Consensus       339 Dl~~~~-~---~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~~p  414 (550)
T PRK08184        339 DATLLA-H---KDHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAITLS  414 (550)
T ss_pred             Chhhhc-c---cchHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEECc
Confidence            987321 1   11111122334445577889999999999997 9999999 9999999999999       99999999


Q ss_pred             cccccccCCCchHHHHhhc-cHHH-HHHH--hhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHH
Q 018834          167 ETLIGFHPDAGASFYLSHL-PGHL-GEFL--ALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEAC  241 (350)
Q Consensus       167 e~~iGl~P~~G~s~~L~rl-~g~~-a~~l--~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~  241 (350)
                      |+++|++|++|++++|+|+ +|.. ++++  ++||++++|+||+++|||++++|++++.+.. +.+.+++..+|.+++.+
T Consensus       415 e~~~Gl~p~~gg~~~L~r~~vG~~~A~~~~l~~tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~~~  494 (550)
T PRK08184        415 ALNFGLYPMVNGLSRLARRFYGEPDPLAAVRAKIGQPLDADAAEELGLVTAAPDDIDWEDEVRIALEERASLSPDALTGM  494 (550)
T ss_pred             cccccCCCCCCcHHHhHHHhcChHHHHHHHHHHhCCcCCHHHHHHcCCcccccChHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            9999999999999999987 6987 8876  5999999999999999999999999887644 44578999999999999


Q ss_pred             HHHHhccCCCCcchH-H-HHHHHHHHhcC-cCCHH---HHHHHHhccCCCCCc
Q 018834          242 LEKYSDLVYPDKNSV-I-HRIDIVDKCFG-LDTVE---EIIDSLESEASLIND  288 (350)
Q Consensus       242 ~~~~~~~~~~~~~~~-~-~~~~~i~~~f~-~~~~~---ei~~~lek~~~~~~~  288 (350)
                      |+.++.......+.. . .+.+++..+|. .+..+   ++-+|++|++|+|..
T Consensus       495 K~~l~~~~~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~ekr~~~f~~  547 (550)
T PRK08184        495 EANLRFAGPETMETRIFGRLTAWQNWIFQRPNAVGEKGALKVYGTGQKAQFDW  547 (550)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHhcCCcccccchHHHHhccCCCCCCCC
Confidence            999987655443333 3 34677888895 55666   699999999988753

>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase

Probab=100.00  E-value=2.4e-42  Score=325.38  Aligned_cols=203  Identities=20%  Similarity=0.330  Sum_probs=175.0

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHHHHHHHHHHHH
Q 018834           44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSF  122 (350)
Q Consensus        44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l  122 (350)
                      +++||||||+++|++|.+|+.+|.++++.++.|++|++|||||.| ++||+|+|++++..... +.......+....+++
T Consensus        38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~-~~~~~~~~~~~~~~~l  116 (360)
T TIGR03200        38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYA-GNPQEYRQYMRLFNDM  116 (360)
T ss_pred             EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhcc-cChhHHHHHHHHHHHH
Confidence            466999999999999999999999999999999999999999999 79999999998765321 1223334455556678


Q ss_pred             HHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhcCCCCC
Q 018834          123 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLN  201 (350)
Q Consensus       123 ~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ltG~~l~  201 (350)
                      +..|..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.. ++++++||++++
T Consensus       117 ~~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~rA~~llltGe~~s  196 (360)
T TIGR03200       117 VSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCEQAMVSGTLCEPWS  196 (360)
T ss_pred             HHHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHHHHHHHHHhCCcCc
Confidence            8889999999999999999999999999999999999999999999999999999999999999988 999999999999


Q ss_pred             HHHHHHCCCCccccCCCCh------------HHHHHHHHHhc-cCCH--HHHHHHHHHHhc
Q 018834          202 GAEMMACGLATHYSVSEKL------------PLIEEELGKLV-TDDP--SVIEACLEKYSD  247 (350)
Q Consensus       202 a~eA~~~GLv~~vv~~~~l------------~~~~~~l~~l~-~~~~--~~i~~~~~~~~~  247 (350)
                      |+||+++|||++++|+.++            ++..+.+.++. ..+.  .++...|+.+..
T Consensus       197 A~EA~~~GLVd~VVp~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~  257 (360)
T TIGR03200       197 AHKAKRLGIIMDVVPALKVDGKFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQ  257 (360)
T ss_pred             HHHHHHcCChheecCchhcCcchhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhc
Confidence            9999999999999999887            55555554433 3333  366777776664

Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK06213 enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=1.1e-42  Score=316.02  Aligned_cols=206  Identities=17%  Similarity=0.119  Sum_probs=182.9

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +.|.++.+++|++||||||+ .|++|.+|+.+|.++++.++  +++++|||+|.|+.||+|+|++++...     .+...
T Consensus         3 ~~i~~~~~~~v~~itln~~~-~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g~~F~~G~Dl~~~~~~-----~~~~~   74 (229)
T PRK06213          3 ELVSYTLEDGVATITLDDGK-VNALSPAMIDALNAALDQAE--DDRAVVVITGQPGIFSGGFDLKVMTSG-----AQAAI   74 (229)
T ss_pred             ceEEEEecCCEEEEEeCCCC-CCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCCCceEcCcCHHHHhcc-----hHhHH
Confidence            46889999999999999985 69999999999999999988  457999999999999999999987531     22334


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      .++...++++.++.++|||+||++||+|+|||++|+++|||||++++ ++|++||+++|++|+.|+.+++++.+|.. ++
T Consensus        75 ~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~~a~  154 (229)
T PRK06213         75 ALLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPSAFQ  154 (229)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHHHHH
Confidence            55666778888999999999999999999999999999999999999 99999999999998888888888888887 89


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhc
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSD  247 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~  247 (350)
                      +|++||++++|+||+++||||+++|++++.+.... .++++..++.++...|+.++.
T Consensus       155 ~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~  211 (229)
T PRK06213        155 RAVINAEMFDPEEAVAAGFLDEVVPPEQLLARAQAAARELAGLNMGAHAATKLKVRA  211 (229)
T ss_pred             HHHHcCcccCHHHHHHCCCceeccChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence            99999999999999999999999998887765444 467888999999999988765

>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=100.00  E-value=9.2e-43  Score=299.04  Aligned_cols=248  Identities=21%  Similarity=0.310  Sum_probs=212.4

Q ss_pred             CCcEEEEE----eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcC
Q 018834           33 CNQVLVEG----KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG  107 (350)
Q Consensus        33 ~~~v~~~~----~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~  107 (350)
                      .++|.+++    +.|+.+|-+|||.+.|+|+.-|+.+|.++|+++..|+.+|+|+|++.- ..||+|.|+++-..+    
T Consensus        26 ~~Ev~v~~L~g~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~M----  101 (291)
T KOG1679|consen   26 ANEVFVRRLTGKDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTM----  101 (291)
T ss_pred             CceeeeeeccCCCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcC----
Confidence            55676664    457999999999999999999999999999999999999999999975 899999999997654    


Q ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH
Q 018834          108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG  187 (350)
Q Consensus       108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g  187 (350)
                      .+.+...|.+.+..++..|++.|.|+||+|+|.++|||++|+++||+|+|.++++|+++|++++++|+.|+|++|+|++|
T Consensus       102 s~~Ev~~fV~~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg  181 (291)
T KOG1679|consen  102 SPSEVTRFVNGLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVG  181 (291)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHh
Confidence            56778889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HH-HHHHhhcCCCCCHHHHHHCCCCccccCCCCh-HHHHH----HHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHH
Q 018834          188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKL-PLIEE----ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID  261 (350)
Q Consensus       188 ~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l-~~~~~----~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  261 (350)
                      .. +++|++||+.+++.||..+|||+|+|...+- ++..+    -..++....|-+++.+|..++..+..+....+.   
T Consensus       182 ~alaKELIftarvl~g~eA~~lGlVnhvv~qneegdaa~~kal~lA~eilp~gPiavr~aKlAIn~G~evdiasgl~---  258 (291)
T KOG1679|consen  182 VALAKELIFTARVLNGAEAAKLGLVNHVVEQNEEGDAAYQKALELAREILPQGPIAVRLAKLAINLGMEVDIASGLS---  258 (291)
T ss_pred             HHHHHhHhhhheeccchhHHhcchHHHHHhcCccccHHHHHHHHHHHHhccCCchhhhHHHHHhccCceeccccccc---
Confidence            98 9999999999999999999999999987532 22222    225777889999999999998776544332222   


Q ss_pred             HHHHhc-----CcCCHHHHHHHHhccCCCCC
Q 018834          262 IVDKCF-----GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       262 ~i~~~f-----~~~~~~ei~~~lek~~~~~~  287 (350)
                      .-+.||     ..|..+++.+|-+|++|.+.
T Consensus       259 iEe~CYaq~i~t~drLeglaaf~ekr~p~y~  289 (291)
T KOG1679|consen  259 IEEMCYAQIIPTKDRLEGLAAFKEKRKPEYK  289 (291)
T ss_pred             HHHHHHHhcCcHHHHHHHHHHHHhhcCCCcC
Confidence            112333     46788888888899888654

>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ

Probab=100.00  E-value=4.6e-42  Score=355.75  Aligned_cols=271  Identities=21%  Similarity=0.260  Sum_probs=209.4

Q ss_pred             EEEeCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEE-EcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           38 VEGKANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSM-KGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        38 ~~~~~~v~~ItLnrp-~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl-~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      .+.+++|++|||||| ++.|+||.+|+.+|.++|+.++.|++|++||| +|.|++||+|+|++++...   ........+
T Consensus         5 ~~~~~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g~~FcaG~Dl~~~~~~---~~~~~~~~~   81 (699)
T TIGR02440         5 TVREDGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKPDNFIAGADISMLAAC---QTAGEAKAL   81 (699)
T ss_pred             EEcCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCceeeccCchhhhcc---CChhHHHHH
Confidence            345689999999999 68999999999999999999999999999986 5788999999999987532   112233344


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      +...+.++..|.++||||||+|||+|+|||++|+++||||||+++  ++|++||+++|++|++|++++|+|++|.. +++
T Consensus        82 ~~~~~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~~A~~  161 (699)
T TIGR02440        82 AQQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALD  161 (699)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHHHHHH
Confidence            555667888899999999999999999999999999999999986  79999999999999999999999999998 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcC--cC
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG--LD  270 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~--~~  270 (350)
                      |++||+.++|++|+++||||+++|++++.+.+..+++......              .+.  ...      .+...  ..
T Consensus       162 llltG~~~~a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~--------------~~~--~~~------~~~~~~~~~  219 (699)
T TIGR02440       162 MILTGKQLRAKQALKLGLVDDVVPQSILLDTAVEMALKGKPIR--------------KPL--SLQ------ERLLEGTPL  219 (699)
T ss_pred             HHHcCCcCCHHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCC--------------CCc--cch------hhhcccCch
Confidence            9999999999999999999999998887665544432100000              000  000      00000  00


Q ss_pred             CHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCcccc
Q 018834          271 TVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLF  348 (350)
Q Consensus       271 ~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~~~~  348 (350)
                      ....+.+...           +...++...+.| +...++++++.+..   .+++++++.|.+.+..++.+||.+.++
T Consensus       220 a~~~~~~~~~-----------k~~~~~~~~~~~-a~~~~~~~i~~~~~---~~~~~~l~~E~~~~~~~~~s~~~~~~~  282 (699)
T TIGR02440       220 GRALLFDQAA-----------KKTAKKTQGNYP-AAERILDVVRQGLA---QGMQKGLDAEARAFGELVMTPESAALR  282 (699)
T ss_pred             hHHHHHHHHH-----------HHHHHhcccCCh-hHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence            1111111111           112223334555 55666999999999   899999999999999999999987653

Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed

Probab=100.00  E-value=1.9e-41  Score=351.93  Aligned_cols=274  Identities=20%  Similarity=0.265  Sum_probs=210.5

Q ss_pred             CcEEEEE-eCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChH
Q 018834           34 NQVLVEG-KANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        34 ~~v~~~~-~~~v~~ItLnrp-~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ..+.++. +++|++|||||| +++|+||.+|+.+|.++++.++.|+++++|||+|.+ +.||+|+|++++...   ...+
T Consensus         5 ~~~~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~---~~~~   81 (708)
T PRK11154          5 SAFTLNVREDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAAC---KTAQ   81 (708)
T ss_pred             ceEEEEEcCCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhcc---CCHH
Confidence            4567777 689999999999 689999999999999999999999999999999975 899999999987532   1122


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEecccccccccCCCchHHHHhhccHH
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      ....+.+....++.+|.++||||||+|||+|+|||++|+++||||||+++  ++|++||+++|++|++|++++|+|++|.
T Consensus        82 ~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~  161 (708)
T PRK11154         82 EAEALARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGV  161 (708)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCH
Confidence            23334455566888999999999999999999999999999999999986  5999999999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF  267 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f  267 (350)
                      . +++|++||++++|+||+++||||+++|++++.+.+..+++........+            + ...         ...
T Consensus       162 ~~A~~llltG~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~~------------~-~~~---------~~~  219 (708)
T PRK11154        162 STALDMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRPL------------P-VRE---------RLL  219 (708)
T ss_pred             HHHHHHHHhCCcCCHHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCcC------------C-chh---------hhc
Confidence            8 9999999999999999999999999998887654444432110000000            0 000         000


Q ss_pred             Cc--CCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          268 GL--DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       268 ~~--~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +.  .....+.+...+           ...++...+. .++..++++++++..   .+++++++.|.+.+..++.++|.+
T Consensus       220 ~~~p~~~~~~~~~~~~-----------~~~~~~~g~~-~A~~~~k~~i~~~~~---~~~~~~l~~E~~~~~~~~~s~~~~  284 (708)
T PRK11154        220 EGNPLGRALLFKQARK-----------KTLAKTQGNY-PAPERILDVVRTGLE---KGMSSGYEAEARAFGELAMTPESA  284 (708)
T ss_pred             ccCchhHHHHHHHHHH-----------HHHHhcccCC-hHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHHH
Confidence            00  000111111110           1111222233 488888999999998   899999999999999999999877


Q ss_pred             cc
Q 018834          346 LL  347 (350)
Q Consensus       346 ~~  347 (350)
                      .+
T Consensus       285 ~~  286 (708)
T PRK11154        285 AL  286 (708)
T ss_pred             HH
Confidence            54

>PLN02267 enoyl-CoA hydratase/isomerase family protein

Probab=100.00  E-value=3e-41  Score=308.10  Aligned_cols=207  Identities=17%  Similarity=0.175  Sum_probs=169.3

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCce-EEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG-FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD  114 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~-~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~  114 (350)
                      +.++.+++|++|+||||++ |+||.+|+.+|.++++.++.|++++ +||++|.|+.||+|+|++++...  .........
T Consensus         2 ~~~~~~~~v~~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g~~FsaG~Dl~~~~~~--~~~~~~~~~   78 (239)
T PLN02267          2 CTLEKRGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEGKFFSNGFDLAWAQAA--GSAPSRLHL   78 (239)
T ss_pred             ceeEecCCEEEEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCCCceeCCcCHHHHhcc--ccCHHHHHH
Confidence            5678889999999999985 9999999999999999999998875 77889999999999999986421  111222233


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEe-CCeeEeccccccccc-CCCchHHHHhhccHHH-H-
Q 018834          115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFH-PDAGASFYLSHLPGHL-G-  190 (350)
Q Consensus       115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riat-e~a~f~~Pe~~iGl~-P~~G~s~~L~rl~g~~-a-  190 (350)
                      +.+..++++..|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|+. |++ ++++|++++|.. + 
T Consensus        79 ~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~-~~~~l~~~vG~~~a~  157 (239)
T PLN02267         79 MVAKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDY-FMALLRAKIGSPAAR  157 (239)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChH-HHHHHHHHcChHHHH
Confidence            44556678888999999999999999999999999999999998 568999999999997 555 578899988876 7 


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCC-CChHHHHHHH-HHhccC--CHHHHHHHHHHHh
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVS-EKLPLIEEEL-GKLVTD--DPSVIEACLEKYS  246 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~-~~l~~~~~~l-~~l~~~--~~~~i~~~~~~~~  246 (350)
                      ++|++||++++|+||+++||||+++|+ +++.+...++ ++++..  ++......|+.++
T Consensus       158 ~~llltG~~~~a~eA~~~Glv~~vv~~~~~l~~~a~~~A~~ia~~~~~~~~~~~~k~~~~  217 (239)
T PLN02267        158 RDVLLRAAKLTAEEAVEMGIVDSAHDSAEETVEAAVRLGEELAARKWNGEVYASIRKSLL  217 (239)
T ss_pred             HHHHHcCCcCCHHHHHHCCCcceecCCHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHH
Confidence            699999999999999999999999985 5665544444 556655  3455666666554

>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]

Probab=100.00  E-value=3.7e-41  Score=291.61  Aligned_cols=244  Identities=20%  Similarity=0.295  Sum_probs=200.5

Q ss_pred             eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhh---hcCC-----hHHH
Q 018834           41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFM---NQGK-----LEEC  112 (350)
Q Consensus        41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~---~~~~-----~~~~  112 (350)
                      +..|..+.||||.|+|+||..|+.|+.++|+.+..||++++|||.|+|+.||+|.|+..+....   .+++     ....
T Consensus        29 ~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~GKhFcaGIDl~~~~~~~~~~~~~dd~aR~g~~l  108 (292)
T KOG1681|consen   29 QPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAGKHFCAGIDLNDMASDRILQPEGDDVARKGRSL  108 (292)
T ss_pred             CCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCCcceecccCcchhhhhhccccccchHhhhhHHH
Confidence            4568999999999999999999999999999999999999999999999999999987654321   1111     2345


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH--H
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL--G  190 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~--a  190 (350)
                      .++...+++.+..|++||||||++|||+|+|||+.|..+||+|+|++++.|..-|+.+|+..|+|.-.+||+.+|..  +
T Consensus       109 rr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL~RlpkvVGn~s~~  188 (292)
T KOG1681|consen  109 RRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTLNRLPKVVGNQSLA  188 (292)
T ss_pred             HHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhHhhhhHHhcchHHH
Confidence            66777788899999999999999999999999999999999999999999999999999999999999999999954  9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCC-hH-HHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHH--HHHHh
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEK-LP-LIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID--IVDKC  266 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~-l~-~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~i~~~  266 (350)
                      +++++|++.+.|.||++.|||.+|+|+.+ +. ....-.+.++.++|.++..+|+.+........+..+.+..  -...+
T Consensus       189 ~elafTar~f~a~EAl~~GLvSrvf~dk~~ll~~~l~mA~~Ia~KSpvaVqgTK~~L~ysrehsv~~sLnyvatwNms~L  268 (292)
T KOG1681|consen  189 RELAFTARKFSADEALDSGLVSRVFPDKEELLNGALPMAELIASKSPVAVQGTKENLLYSREHSVEESLNYVATWNMSML  268 (292)
T ss_pred             HHHHhhhhhcchhhhhhcCcchhhcCCHHHHHhhhHHHHHHhccCCceeeechHHHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence            99999999999999999999999999743 33 3444446788899999999998887654333222333211  12344


Q ss_pred             cCcCCHHHHHHHHhccCC
Q 018834          267 FGLDTVEEIIDSLESEAS  284 (350)
Q Consensus       267 f~~~~~~ei~~~lek~~~  284 (350)
                      ++.|-++..++.++|.++
T Consensus       269 ~s~Dl~~av~a~m~k~k~  286 (292)
T KOG1681|consen  269 LSDDLVKAVMAQMEKLKT  286 (292)
T ss_pred             HHHHHHHHHHHHhhcCCC
Confidence            466777777777776543

>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily

Probab=100.00  E-value=3e-40  Score=292.42  Aligned_cols=190  Identities=33%  Similarity=0.532  Sum_probs=173.1

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      +.+++++++++|+||+|++.|++|.+|+++|.++++.++.|+++++|||+|.|+.||+|+|++++.......  +....+
T Consensus         1 i~~~~~~~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~~~Fs~G~dl~~~~~~~~~~--~~~~~~   78 (195)
T cd06558           1 VLVERDGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAGKAFCAGADLKELAALSDAG--EEARAF   78 (195)
T ss_pred             CEEEEECCEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceEeCcCHHHHhcccccc--hhHHHH
Confidence            467888999999999999999999999999999999999999999999999999999999999987542111  135677


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA  194 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~  194 (350)
                      ++..+.+...+..+|||+||++||+|+|||++++++||+||++++++|++||+++|++|++|++++|++++|.. +.+++
T Consensus        79 ~~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~~a~~~~  158 (195)
T cd06558          79 IRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPARARELL  158 (195)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHHHHHHHH
Confidence            88889999999999999999999999999999999999999999999999999999999999999999999877 99999


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChHHHHHHH
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL  227 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l  227 (350)
                      ++|+.++|+||+++||++++++.+++.+....+
T Consensus       159 l~g~~~~a~ea~~~Glv~~~~~~~~l~~~a~~~  191 (195)
T cd06558         159 LTGRRISAEEALELGLVDEVVPDEELLAAALEL  191 (195)
T ss_pred             HcCCccCHHHHHHcCCCCeecChhHHHHHHHHH
Confidence            999999999999999999999987766544443

This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.

>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase

Probab=100.00  E-value=1.1e-38  Score=318.71  Aligned_cols=202  Identities=14%  Similarity=0.168  Sum_probs=166.9

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHH-cCCCceEEEEEcC-CCccccCCChhh
Q 018834           32 LCNQVLVEGKANSRMAILNRPS----------ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGS-GRAFCAGGDIVS   99 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~----------~~Nal~~~m~~~L~~~l~~~~-~d~~v~~vvl~g~-g~~F~aG~Dl~~   99 (350)
                      .++++.++++++|++||||||+          +.|++|.+|+.+|.++|+.++ .|+++|+|||||. |++||+|+|+++
T Consensus         9 ~~~~v~~~~~g~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL~~   88 (546)
T TIGR03222         9 QYRHWKLTFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANIFM   88 (546)
T ss_pred             CCceEEEEeeCCEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCHHH
Confidence            3567999999999999999976          899999999999999999999 7899999999997 599999999998


Q ss_pred             HHHhhhcCChHHHHHHHH-HHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEeccccc-ccccCC
Q 018834          100 LYHFMNQGKLEECKDFFR-TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHPD  175 (350)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~-~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~-iGl~P~  175 (350)
                      +...... .......+.. ....+...+.++||||||+|||+|+|||++|+++||+||++++  ++|++||++ +|++|+
T Consensus        89 ~~~~~~~-~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl~P~  167 (546)
T TIGR03222        89 LGLSTHA-WKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGVLPG  167 (546)
T ss_pred             Hhccccc-hhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCcCCc
Confidence            7532110 0111111111 1123445677899999999999999999999999999999986  799999997 999999


Q ss_pred             CchHHHHh--hccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCC
Q 018834          176 AGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDD  234 (350)
Q Consensus       176 ~G~s~~L~--rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~  234 (350)
                      +|++++++  +.+|.. +++|++||++++|+||+++||||++||++++.+....+ .+++..+
T Consensus       168 ~gg~~~l~~~~~vg~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~  230 (546)
T TIGR03222       168 TGGLTRVTDKRRVRRDHADIFCTIEEGVRGKRAKEWRLVDEVVKPSQFDAAIAERAAELAAQS  230 (546)
T ss_pred             cchhhhccccchhCHHHHHHHHHcCCCccHHHHHHcCCceEEeChHHHHHHHHHHHHHHHhCC
Confidence            99999897  577877 99999999999999999999999999998887654444 4555433

In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.

>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]

Probab=100.00  E-value=8.1e-39  Score=275.19  Aligned_cols=250  Identities=17%  Similarity=0.241  Sum_probs=203.7

Q ss_pred             CCCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcC--C-CccccCCChhhHHHh--hh
Q 018834           32 LCNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--G-RAFCAGGDIVSLYHF--MN  105 (350)
Q Consensus        32 ~~~~v~~~~~-~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~--g-~~F~aG~Dl~~~~~~--~~  105 (350)
                      .++.|++++. ++++.||+|||+++||+.+..+.|+.++|..++.|++|.+|+|||+  | ++||+|+|-+--...  +.
T Consensus        16 ~y~dI~Y~~~~~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~gY~   95 (282)
T COG0447          16 GYEDITYEKSVDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSGGYV   95 (282)
T ss_pred             CcceeEEeeccCceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCCCcc
Confidence            3667999988 9999999999999999999999999999999999999999999986  5 899999997643221  11


Q ss_pred             cCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhc
Q 018834          106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL  185 (350)
Q Consensus       106 ~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl  185 (350)
                      .++.  ..++  ...++-+.|..+||||||.++|+++|||-.|-+.||+.||+++++|+..-.++|-|-++.++-+|+|+
T Consensus        96 ~d~~--~~rL--nvLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~  171 (282)
T COG0447          96 DDDG--IPRL--NVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARI  171 (282)
T ss_pred             CCcc--Cccc--chhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHH
Confidence            1111  1111  12244556889999999999999999999999999999999999999999999999888888889999


Q ss_pred             cHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHH--HH
Q 018834          186 PGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHR--ID  261 (350)
Q Consensus       186 ~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~  261 (350)
                      +|.. |+++.+.++.++|+||+++|+||.|||.++|++ ..++..++...+|.+++..|..++...... ..+.+.  ..
T Consensus       172 VGqKkArEIwfLcR~Y~A~eal~MGlVN~Vvp~~~LE~e~v~W~~E~l~kSP~AlR~LK~Afnad~DGl-aG~q~~ag~a  250 (282)
T COG0447         172 VGQKKAREIWFLCRQYDAEEALDMGLVNTVVPHADLEKETVQWAREMLAKSPTALRMLKAAFNADCDGL-AGLQELAGNA  250 (282)
T ss_pred             hhhhhhHHhhhhhhhccHHHHHhcCceeeeccHHHHHHHHHHHHHHHHhcChHHHHHHHHHhcCCCchh-hHHHHhcccc
Confidence            9998 999999999999999999999999999999985 677778999999999999999998643211 111110  11


Q ss_pred             HHHHhcCcCCHHHHHHHHhccCCCC
Q 018834          262 IVDKCFGLDTVEEIIDSLESEASLI  286 (350)
Q Consensus       262 ~i~~~f~~~~~~ei~~~lek~~~~~  286 (350)
                      ..-.+...+..|+--+|+||+.|.|
T Consensus       251 t~L~YmTdEa~EGr~AF~eKR~Pdf  275 (282)
T COG0447         251 TLLYYMTDEAQEGRDAFLEKRKPDF  275 (282)
T ss_pred             eEEEEechhhhhhHHHHhhccCCCh
Confidence            1111225677888889999998765

>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional

Probab=100.00  E-value=1.5e-37  Score=311.71  Aligned_cols=203  Identities=14%  Similarity=0.171  Sum_probs=166.3

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHHH-cCCCceEEEEEcCC-CccccCCChh
Q 018834           31 DLCNQVLVEGKANSRMAILNRP-------S---ALNALNTNMGAKLNKLFKAWE-NDPNIGFVSMKGSG-RAFCAGGDIV   98 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp-------~---~~Nal~~~m~~~L~~~l~~~~-~d~~v~~vvl~g~g-~~F~aG~Dl~   98 (350)
                      ..++++.++.+++|++||||||       +   ++|++|.+|+.+|.+++++++ .|++|++|||+|.+ ++||+|+|++
T Consensus        12 ~~~~~~~~e~~~~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL~   91 (550)
T PRK08184         12 SQYRHWKLSFDGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANIF   91 (550)
T ss_pred             CCCceEEEEeeCCEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCHH
Confidence            4466799999999999999965       4   899999999999999999999 78999999999985 9999999999


Q ss_pred             hHHHhhhcCChHHHHHHHHHH-HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEeccccc-ccccC
Q 018834           99 SLYHFMNQGKLEECKDFFRTL-YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL-IGFHP  174 (350)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~-iGl~P  174 (350)
                      ++...... .......+.+.. ..+...+..+||||||+|||+|+|||++|+++|||||++++  ++|++||++ +|++|
T Consensus        92 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl~P  170 (550)
T PRK08184         92 MLGGSSHA-WKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGVLP  170 (550)
T ss_pred             hHhccccc-hhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccccCC
Confidence            87532100 001111111111 12345677899999999999999999999999999999987  899999997 99999


Q ss_pred             CCchHHHHh--hccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCC
Q 018834          175 DAGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDD  234 (350)
Q Consensus       175 ~~G~s~~L~--rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~  234 (350)
                      ++|++++|+  +++|.. +.+|++||++++|+||+++||||+++|++++.+... .+.+++..+
T Consensus       171 ~~gg~~rl~~~~~vg~~~A~~llltG~~i~AeeA~~~GLVd~vv~~d~l~~~a~~~A~~ia~~~  234 (550)
T PRK08184        171 GTGGLTRVTDKRKVRRDLADIFCTIEEGVRGKRAVDWRLVDEVVKPSKFDAKVAERAAELAAAS  234 (550)
T ss_pred             CcchHHHhhhhhhcCHHHHHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCC
Confidence            999999998  678887 999999999999999999999999999988765443 334555443

>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]

Probab=100.00  E-value=2.1e-37  Score=274.31  Aligned_cols=249  Identities=20%  Similarity=0.295  Sum_probs=209.2

Q ss_pred             CCcEEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLn-rp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +..+.+++++++.+|.+| ||++.|+|+.+|..++.++|+.+..|+++..++++|.|++||+|.|++.+......+..+.
T Consensus         6 ~~~~vv~~~~g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G~~f~sG~Df~~~~~~~~~d~~~~   85 (266)
T KOG0016|consen    6 YREIVVTRENGPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNGSYFCSGLDFSPFAKALDDDANEE   85 (266)
T ss_pred             ccceEEEecCCcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCccEEeeccccchhhhcCCCccccc
Confidence            456899999999999999 9999999999999999999999999999999999999999999999999876643333222


Q ss_pred             H---HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834          112 C---KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       112 ~---~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      .   .++...+......+.++|||+||.+||+++|-|+.+...||+++|+++++|..|++++|..|++|++|.+|+++|.
T Consensus        86 ~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p~imG~  165 (266)
T KOG0016|consen   86 SDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLPKIMGS  165 (266)
T ss_pred             chhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeehHhhch
Confidence            2   2223333446777889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHH
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDK  265 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~  265 (350)
                      . |.+|+|-|++++|+||.+.|||+++++.+.+.+ +...+++.+..+|..++..|+.++........ ....+...+..
T Consensus       166 ~~A~E~ll~~~kltA~Ea~~~glVskif~~~tf~~~v~~~ikq~s~l~p~sl~~~K~L~rs~~k~~l~~an~~E~~~l~~  245 (266)
T KOG0016|consen  166 ASANEMLLFGEKLTAQEACEKGLVSKIFPAETFNEEVLKKIKQYSKLSPESLLGMKKLLRSNIKEELIKANEEECNVLLK  245 (266)
T ss_pred             hhHHHHHHhCCcccHHHHHhcCchhhhcChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence            8 999999999999999999999999999999875 67788889999999999999988875432211 12223555666


Q ss_pred             hc-CcCCHHHHHHHHhc
Q 018834          266 CF-GLDTVEEIIDSLES  281 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek  281 (350)
                      .| +.+..+.+.+++.+
T Consensus       246 ~W~s~e~~~~~~~~~~~  262 (266)
T KOG0016|consen  246 QWVSAECLARFKQYLSK  262 (266)
T ss_pred             hccChHHHHHHHHHhcc
Confidence            66 45555555555543

>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]

Probab=100.00  E-value=5.9e-37  Score=261.32  Aligned_cols=254  Identities=20%  Similarity=0.241  Sum_probs=210.2

Q ss_pred             cCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCCh
Q 018834           30 DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL  109 (350)
Q Consensus        30 ~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~  109 (350)
                      .++....+++.+++|..|+||+|+|+|.|+.+|+.+|.+.+....++.++|+|||+..|+.||+|.|++++.+.   .+.
T Consensus        28 ~~p~~~g~~~~~~gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~GkifSaGH~LKELt~e---~g~  104 (287)
T KOG1682|consen   28 NGPSDLGLVKEHNGVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQGKIFSAGHNLKELTNE---PGS  104 (287)
T ss_pred             cCcccccccccccceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCCccccccccHHHhhcC---ccc
Confidence            34445667788899999999999999999999999999999998888899999999999999999999999753   344


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834          110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                      +.....|....+++..|.+.|.|||+-+||++...|+.|...||+++|+++++|..|-..+|+|...-+.. |.|.+...
T Consensus       105 d~haevFqtc~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGvA-laRavpRk  183 (287)
T KOG1682|consen  105 DIHAEVFQTCTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGVA-LARAVPRK  183 (287)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcchh-Hhhhcchh
Confidence            55677889999999999999999999999999999999999999999999999999999999986654443 66766655


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHh
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKC  266 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~  266 (350)
                       ++||++||.+|+++||+..||++++||+++++...+.+ ..+-..+...+...|+.|.......... .....+.+-.-
T Consensus       184 va~~ML~Tg~Pi~~eeAl~sGlvskvVp~~el~~e~~~i~~~i~~~srav~slgk~f~y~q~~ms~~ea~~~~~~~m~~n  263 (287)
T KOG1682|consen  184 VAAYMLMTGLPITGEEALISGLVSKVVPAEELDKEIEEITNAIKAKSRAVISLGKEFYYKQLAMSQAEAFSAAQEKMCEN  263 (287)
T ss_pred             HHHHHHHhCCCCchHHHHHhhhhhhcCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhc
Confidence             99999999999999999999999999999998655544 4555667777888888877654322111 11123344444


Q ss_pred             c-CcCCHHHHHHHHhccCCCCC
Q 018834          267 F-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       267 f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      | -.|..|+|.+|++|+.|+|.
T Consensus       264 ~ql~d~kegiasf~~krp~~~~  285 (287)
T KOG1682|consen  264 FQLGDTKEGIASFFEKRPPNWK  285 (287)
T ss_pred             ccccchHHHHHHHhccCCCCcC
Confidence            5 37889999999999987664

>cd07014 S49_SppA Signal peptide peptidase A

Probab=99.78  E-value=4.6e-19  Score=154.76  Aligned_cols=140  Identities=16%  Similarity=0.110  Sum_probs=111.3

Q ss_pred             HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Q 018834           61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV  140 (350)
Q Consensus        61 ~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~  140 (350)
                      -.+.+|.++++.++.|++|++|||++    +|.|+|+....                ..++++..+..++|||||++||.
T Consensus        22 ~~~~~l~~~l~~a~~d~~v~~vvl~~----~~~gg~~~~~~----------------~~~~~i~~~~~~~kpVia~v~G~   81 (177)
T cd07014          22 VSGDTTAAQIRDARLDPKVKAIVLRV----NSPGGSVTASE----------------VIRAELAAARAAGKPVVASGGGN   81 (177)
T ss_pred             cCHHHHHHHHHHHhcCCCceEEEEEe----eCCCcCHHHHH----------------HHHHHHHHHHhCCCCEEEEECCc
Confidence            35689999999999999999999987    79999876431                12335566778999999999999


Q ss_pred             ccccccccccccCEEEEeCCeeEecccccccccCCCchHH--------HHhhccH--HH-HHHHhhcCCCCCHHHHHHCC
Q 018834          141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASF--------YLSHLPG--HL-GEFLALTGAKLNGAEMMACG  209 (350)
Q Consensus       141 ~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~--------~L~rl~g--~~-a~~l~ltG~~l~a~eA~~~G  209 (350)
                      |.|||+.|+++||++++++++.|+.+.+..+.-+......        .+++..|  .. ..+++..|..++|++|++.|
T Consensus        82 a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~~~~~~l~~g~~~~a~~A~~~G  161 (177)
T cd07014          82 AASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPEQQIDKIAQGGVWTGQDAKANG  161 (177)
T ss_pred             hhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHHHhHHHhcCcCeEeHHHHHHcC
Confidence            9999999999999999999999999887766433222222        3333334  33 67788899999999999999


Q ss_pred             CCccccCCCCh
Q 018834          210 LATHYSVSEKL  220 (350)
Q Consensus       210 Lv~~vv~~~~l  220 (350)
                      |||.+.+.+++
T Consensus       162 LVD~v~~~~e~  172 (177)
T cd07014         162 LVDSLGSFDDA  172 (177)
T ss_pred             CcccCCCHHHH
Confidence            99999986554

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p

>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=99.76  E-value=3.3e-18  Score=150.61  Aligned_cols=145  Identities=12%  Similarity=0.074  Sum_probs=113.8

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      ++|.|+     ..++..+...+.+.|+.++.|+ ++.|+|.    .=|.||++..-.                   .+..
T Consensus         2 ~vv~i~-----g~I~~~~~~~l~~~l~~a~~~~-~~~vvl~----InSpGG~v~~~~-------------------~i~~   52 (187)
T cd07020           2 YVLEIN-----GAITPATADYLERAIDQAEEGG-ADALIIE----LDTPGGLLDSTR-------------------EIVQ   52 (187)
T ss_pred             EEEEEe-----eEEChHHHHHHHHHHHHHHhCC-CCEEEEE----EECCCCCHHHHH-------------------HHHH
Confidence            456665     3366777888999999988664 7888774    235566654321                   2233


Q ss_pred             HHhcCCCcEEEEEC---CcccccccccccccCEEEEeCCeeEecccccccccCCC--------------chHHHHhhccH
Q 018834          125 LLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDA--------------GASFYLSHLPG  187 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~---G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~--------------G~s~~L~rl~g  187 (350)
                      .|..+|||||++++   |+|.|||+.|+++||+||++++++|+++++..|..+..              +....+++..|
T Consensus        53 ~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G  132 (187)
T cd07020          53 AILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAELRG  132 (187)
T ss_pred             HHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHHHcC
Confidence            45679999999999   99999999999999999999999999999985554432              24456777777


Q ss_pred             H--H-HHHHhhcCCCCCHHHHHHCCCCccccCCC
Q 018834          188 H--L-GEFLALTGAKLNGAEMMACGLATHYSVSE  218 (350)
Q Consensus       188 ~--~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~  218 (350)
                      .  . +..++++|+.++|+||+++||||++++++
T Consensus       133 ~~~~~a~~~l~~g~~~~a~eA~~~Glvd~v~~~~  166 (187)
T cd07020         133 RNAEWAEKAVRESLSLTAEEALKLGVIDLIAADL  166 (187)
T ss_pred             CCHHHHHHHHHcCCeecHHHHHHcCCcccccCCH
Confidence            5  3 88999999999999999999999999875

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c

>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=99.62  E-value=2.1e-15  Score=135.26  Aligned_cols=88  Identities=18%  Similarity=0.224  Sum_probs=75.1

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834           57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI  136 (350)
Q Consensus        57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~  136 (350)
                      .-+..++.+|.++|+.+..||+|++|||+    .||+|+|+..+.+                .++.+..+..++||+||+
T Consensus        17 ~~~~~~~~~l~~~l~~a~~d~~v~~ivL~----~~s~Gg~~~~~~~----------------~~~~l~~~~~~~kpVia~   76 (211)
T cd07019          17 TQGNVGGDTTAAQIRDARLDPKVKAIVLR----VNSPGGSVTASEV----------------IRAELAAARAAGKPVVVS   76 (211)
T ss_pred             CCCccCHHHHHHHHHHHhhCCCceEEEEE----EcCCCcCHHHHHH----------------HHHHHHHHHhCCCCEEEE
Confidence            33455789999999999999999999997    6999999976531                123445677889999999


Q ss_pred             ECCcccccccccccccCEEEEeCCeeEe
Q 018834          137 LNGVTMGGGAGVSIPGTFRVACGKTVFA  164 (350)
Q Consensus       137 i~G~~~GgG~~Lal~~D~riate~a~f~  164 (350)
                      ++|.|.|+|+.|+++||++++++++.|+
T Consensus        77 v~g~a~s~gy~la~~aD~i~a~~~a~~g  104 (211)
T cd07019          77 AGGAAASGGYWISTPANYIVANPSTLTG  104 (211)
T ss_pred             ECCeehhHHHHHHHhCCEEEEcCCCEEE
Confidence            9999999999999999999999998886

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te

>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A

Probab=99.54  E-value=1.7e-14  Score=117.24  Aligned_cols=79  Identities=35%  Similarity=0.690  Sum_probs=72.0

Q ss_pred             HHHHHHHHhcCcCCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhh
Q 018834          258 HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGT  337 (350)
Q Consensus       258 ~~~~~i~~~f~~~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~  337 (350)
                      .....|++||+.+++++|++.|+..    +++|++++++.|+++||+|+++|+++++++++   .|++|||++|+++...
T Consensus         4 ~~~~~I~~~F~~~s~~eI~~~L~~~----~~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~~---~sl~e~l~~E~~~a~~   76 (118)
T PF13766_consen    4 EHLEAIDRCFSADSVEEIIEALEAD----GDEWAQKTLETLRSGSPLSLKVTFEQLRRGRN---LSLAECLRMEYRLASR   76 (118)
T ss_dssp             HCHHHHHHHTTSSSHHHHHHHHHHH----S-HHHHHHHHHHCCS-HHHHHHHHHHHHCCTT---S-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCHHHHHHHHHcc----CcHHHHHHHHHHHHCCHHHHHHHHHHHHHhhh---CCHHHHHHHHHHHHHH
Confidence            3467899999999999999999984    78999999999999999999999999999999   9999999999999999


Q ss_pred             hhhccC
Q 018834          338 SVRRHG  343 (350)
Q Consensus       338 ~~~~~~  343 (350)
                      ++.+||
T Consensus        77 ~~~~~D   82 (118)
T PF13766_consen   77 CMRHPD   82 (118)
T ss_dssp             HHCCSC
T ss_pred             Hhccch
Confidence            999886

>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease

Probab=99.52  E-value=8.7e-14  Score=119.45  Aligned_cols=134  Identities=14%  Similarity=0.140  Sum_probs=102.3

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL  137 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i  137 (350)
                      ++..++.+|.+.|+.++.|+.+++|+|..    .|.|+|+....                   .+...|..++||||+.+
T Consensus         8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~----~s~Gg~~~~~~-------------------~i~~~l~~~~kpvva~~   64 (161)
T cd00394           8 IEDVSADQLAAQIRFAEADNSVKAIVLEV----NTPGGRVDAGM-------------------NIVDALQASRKPVIAYV   64 (161)
T ss_pred             EccchHHHHHHHHHHHHhCCCCceEEEEE----ECCCcCHHHHH-------------------HHHHHHHHhCCCEEEEE
Confidence            45588999999999999999999999976    68888765421                   23344667789999999


Q ss_pred             CCcccccccccccccCEEEEeCCeeEecccccccccCCCchH------HHH----hhccHH---------H-HHHHhhcC
Q 018834          138 NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS------FYL----SHLPGH---------L-GEFLALTG  197 (350)
Q Consensus       138 ~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s------~~L----~rl~g~---------~-a~~l~ltG  197 (350)
                      +|.|.++|+.|+++||.|++.+++.|+......+.....+-.      ..+    .+..+.         . ...++..|
T Consensus        65 ~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~~~~~~~~~~  144 (161)
T cd00394          65 GGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTEKLEEDIEKD  144 (161)
T ss_pred             CChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHhcCC
Confidence            999999999999999999999999999988876654322101      111    111111         1 34566789


Q ss_pred             CCCCHHHHHHCCCCccc
Q 018834          198 AKLNGAEMMACGLATHY  214 (350)
Q Consensus       198 ~~l~a~eA~~~GLv~~v  214 (350)
                      ..++++||+++||||++
T Consensus       145 ~~~~a~eA~~~GLvD~i  161 (161)
T cd00394         145 LVLTAQEALEYGLVDAL  161 (161)
T ss_pred             cEEcHHHHHHcCCcCcC
Confidence            99999999999999975

Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=99.49  E-value=2.3e-13  Score=138.88  Aligned_cols=171  Identities=18%  Similarity=0.218  Sum_probs=124.5

Q ss_pred             EeCCEEEEEEcCCCC--CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHH
Q 018834           40 GKANSRMAILNRPSA--LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFR  117 (350)
Q Consensus        40 ~~~~v~~ItLnrp~~--~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~  117 (350)
                      .+++|++|+++.+-.  .|..+....+.+.+.|+.+..|++||+|||+-+    |.|++....                .
T Consensus       306 ~~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrin----SpGGs~~as----------------e  365 (584)
T TIGR00705       306 VQDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRIN----SPGGSVFAS----------------E  365 (584)
T ss_pred             CCCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEec----CCCCCHHHH----------------H
Confidence            457899999986542  233333455678888999999999999999865    333332211                0


Q ss_pred             HHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeE------eccc------ccccccCCCchHHHHhh-
Q 018834          118 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF------ATPE------TLIGFHPDAGASFYLSH-  184 (350)
Q Consensus       118 ~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f------~~Pe------~~iGl~P~~G~s~~L~r-  184 (350)
                      .+++.+..+...+||||+.++|.|.+||+.++++||.++|++++.+      +++.      .++|+.|+...+..+.+ 
T Consensus       366 ~i~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~~~~  445 (584)
T TIGR00705       366 IIRRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHELANV  445 (584)
T ss_pred             HHHHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCcCCC
Confidence            1122333355678999999999999999999999999999999876      6663      58999988776654442 


Q ss_pred             ---------------------------ccH------HHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhc
Q 018834          185 ---------------------------LPG------HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLV  231 (350)
Q Consensus       185 ---------------------------l~g------~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~  231 (350)
                                                 .++      ......+.+|+.++|+||+++||||++   ..++++.+.+++++
T Consensus       446 s~~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~R~l~~e~v~~ia~Grv~tg~eA~~~GLVD~i---g~~~~Ai~~a~~la  522 (584)
T TIGR00705       446 SLLRPLTAEDQAIMQLSVEAGYRRFLSVVSAGRNLTPTQVDKVAQGRVWTGEDAVSNGLVDAL---GGLDEAVAKAAKLA  522 (584)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHhCCCcCHHHHHHcCCcccC---CCHHHHHHHHHHHc
Confidence                                       111      125677889999999999999999999   45666666666665


Q ss_pred             cC
Q 018834          232 TD  233 (350)
Q Consensus       232 ~~  233 (350)
                      ..
T Consensus       523 ~~  524 (584)
T TIGR00705       523 HC  524 (584)
T ss_pred             CC
Confidence            54

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad

Probab=99.48  E-value=6.7e-13  Score=119.36  Aligned_cols=95  Identities=19%  Similarity=0.194  Sum_probs=74.7

Q ss_pred             cCCCCCCCC-CHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhc
Q 018834           50 NRPSALNAL-NTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGT  128 (350)
Q Consensus        50 nrp~~~Nal-~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  128 (350)
                      ++|...|++ +..++.+|.++|+.++.|++|++|||+.    +|.|+++....                .+...+..+..
T Consensus        13 ~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~----~s~gg~~~~~~----------------~l~~~l~~~~~   72 (214)
T cd07022          13 PRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI----DSPGGEVAGVF----------------ELADAIRAARA   72 (214)
T ss_pred             CCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE----eCCCCcHHHHH----------------HHHHHHHHHhc
Confidence            566666654 5689999999999999999999999975    67777754321                11222333334


Q ss_pred             CCCcEEEEECCcccccccccccccCEEEEeCCeeEec
Q 018834          129 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT  165 (350)
Q Consensus       129 ~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~  165 (350)
                       +|||||+++|.|.|||+.|+++||++++++++.|+.
T Consensus        73 -~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~  108 (214)
T cd07022          73 -GKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGS  108 (214)
T ss_pred             -CCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEe
Confidence             699999999999999999999999999999998754

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.

>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=99.44  E-value=4.8e-13  Score=114.81  Aligned_cols=128  Identities=15%  Similarity=0.170  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Q 018834           61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV  140 (350)
Q Consensus        61 ~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~  140 (350)
                      .+...+.+.|+.+..++.+. +.|      -|.||++..-                   ..+...|..++||+|+.++|.
T Consensus        15 ~~~~~~~~~l~~~~~~~~i~-l~i------nspGG~~~~~-------------------~~i~~~i~~~~~pvi~~v~g~   68 (160)
T cd07016          15 VTAKEFKDALDALGDDSDIT-VRI------NSPGGDVFAG-------------------LAIYNALKRHKGKVTVKIDGL   68 (160)
T ss_pred             cCHHHHHHHHHhccCCCCEE-EEE------ECCCCCHHHH-------------------HHHHHHHHhcCCCEEEEEcch
Confidence            46778888888888774443 444      3455554321                   124455677899999999999


Q ss_pred             ccccccccccccCEEEEeCCeeEecccccccccCCCch---------------HHHHhhccH--HH-HHHHhhcCCCCCH
Q 018834          141 TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA---------------SFYLSHLPG--HL-GEFLALTGAKLNG  202 (350)
Q Consensus       141 ~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~---------------s~~L~rl~g--~~-a~~l~ltG~~l~a  202 (350)
                      |.|+|+.|+++||+|+++++++|.++....|..+....               ...+.+..|  .. ...++.++..+++
T Consensus        69 a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l~a  148 (160)
T cd07016          69 AASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWLTA  148 (160)
T ss_pred             HHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeECcH
Confidence            99999999999999999999999998877666544321               222555556  34 6667677778999


Q ss_pred             HHHHHCCCCccc
Q 018834          203 AEMMACGLATHY  214 (350)
Q Consensus       203 ~eA~~~GLv~~v  214 (350)
                      +||+++||||++
T Consensus       149 ~eA~~~GliD~v  160 (160)
T cd07016         149 QEAVELGFADEI  160 (160)
T ss_pred             HHHHHcCCCCcC
Confidence            999999999975

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a

>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad

Probab=99.40  E-value=1.8e-12  Score=116.14  Aligned_cols=85  Identities=22%  Similarity=0.221  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECC
Q 018834           60 TNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG  139 (350)
Q Consensus        60 ~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G  139 (350)
                      ..++.+|.+.|+.++.|+++++|+|++    +|.|+|+....                .+++.+..+..++||+||+++|
T Consensus        16 ~~~~~~l~~~l~~a~~d~~i~~ivl~~----~s~Gg~~~~~~----------------~i~~~i~~~~~~~kpvia~v~g   75 (208)
T cd07023          16 GIGADSLIEQLRKAREDDSVKAVVLRI----NSPGGSVVASE----------------EIYREIRRLRKAKKPVVASMGD   75 (208)
T ss_pred             CCCHHHHHHHHHHHHhCCCCcEEEEEE----ECCCCCHHHHH----------------HHHHHHHHHHhcCCcEEEEECC
Confidence            689999999999999999999999988    68899986521                1233455677889999999999


Q ss_pred             cccccccccccccCEEEEeCCeeEe
Q 018834          140 VTMGGGAGVSIPGTFRVACGKTVFA  164 (350)
Q Consensus       140 ~~~GgG~~Lal~~D~riate~a~f~  164 (350)
                      .|.|+|+.|+++||++++++++.|+
T Consensus        76 ~~~s~g~~lA~aaD~i~a~~~s~~g  100 (208)
T cd07023          76 VAASGGYYIAAAADKIVANPTTITG  100 (208)
T ss_pred             cchhHHHHHHhhCCEEEECCCCeEE
Confidence            9999999999999999999999875

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad

>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type

Probab=99.33  E-value=1.3e-11  Score=110.34  Aligned_cols=93  Identities=22%  Similarity=0.218  Sum_probs=71.5

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834           44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI  123 (350)
Q Consensus        44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (350)
                      |++|+++-+=.      ....+|.+.|+.+..|+++++|+|++    .|.|+|+....                   .+.
T Consensus         2 v~vi~i~g~i~------~s~~~l~~~l~~a~~d~~i~~vvl~~----~s~Gg~~~~~~-------------------~l~   52 (207)
T TIGR00706         2 IAILPVSGAIA------VSPEDFDKKIKRIKDDKSIKALLLRI----NSPGGTVVASE-------------------EIY   52 (207)
T ss_pred             EEEEEEEEEEe------cCHHHHHHHHHHHhhCCCccEEEEEe----cCCCCCHHHHH-------------------HHH
Confidence            45566653321      23578889999999999999999987    48888875432                   123


Q ss_pred             HHHhcCC--CcEEEEECCcccccccccccccCEEEEeCCeeEec
Q 018834          124 YLLGTHL--KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT  165 (350)
Q Consensus       124 ~~i~~~~--kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~  165 (350)
                      ..|..++  ||+||+++|.|.|+|+.|+++||.+++++++.++.
T Consensus        53 ~~i~~~~~~kpvia~v~g~a~s~g~~la~aaD~i~a~p~a~vg~   96 (207)
T TIGR00706        53 EKLKKLKAKKPVVASMGGVAASGGYYIAMAADEIVANPGTITGS   96 (207)
T ss_pred             HHHHHhcCCCCEEEEECCccchHHHHHHhcCCEEEECCCCeEEe
Confidence            3344555  99999999999999999999999999999987654

The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.

>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad

Probab=99.19  E-value=1.2e-10  Score=105.39  Aligned_cols=89  Identities=11%  Similarity=-0.031  Sum_probs=73.4

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834           57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI  136 (350)
Q Consensus        57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~  136 (350)
                      .-+..++.+|.+.|+++..|++|++|||+..+..| ++.++.++.                   +.+..+...+|||||.
T Consensus        25 ~~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s~gg-~~~~~~el~-------------------~~i~~~~~~~kpVia~   84 (222)
T cd07018          25 ESSELSLRDLLEALEKAAEDDRIKGIVLDLDGLSG-GLAKLEELR-------------------QALERFRASGKPVIAY   84 (222)
T ss_pred             CcCCccHHHHHHHHHHHhcCCCeEEEEEECCCCCC-CHHHHHHHH-------------------HHHHHHHHhCCeEEEE
Confidence            34567889999999999999999999999988776 666665543                   2233344579999999


Q ss_pred             ECCcccccccccccccCEEEEeCCeeEecc
Q 018834          137 LNGVTMGGGAGVSIPGTFRVACGKTVFATP  166 (350)
Q Consensus       137 i~G~~~GgG~~Lal~~D~riate~a~f~~P  166 (350)
                      ++| +.+||+.|+++||.+++.+.+.|+..
T Consensus        85 ~~~-~~sggy~lasaad~I~a~p~~~vg~i  113 (222)
T cd07018          85 ADG-YSQGQYYLASAADEIYLNPSGSVELT  113 (222)
T ss_pred             eCC-CCchhhhhhhhCCEEEECCCceEEee
Confidence            998 88999999999999999999988874

Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys

>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=99.16  E-value=2.1e-10  Score=99.94  Aligned_cols=140  Identities=16%  Similarity=0.217  Sum_probs=97.9

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      .+|.++     ..++..+...+.+.|++++.++ ++.|+|.=    =|.||++....                   .+..
T Consensus         2 ~vi~i~-----g~I~~~~~~~l~~~l~~a~~~~-~~~ivl~i----nspGG~v~~~~-------------------~I~~   52 (178)
T cd07021           2 YVIPIE-----GEIDPGLAAFVERALKEAKEEG-ADAVVLDI----DTPGGRVDSAL-------------------EIVD   52 (178)
T ss_pred             EEEEEe-----eEECHHHHHHHHHHHHHHHhCC-CCeEEEEE----ECcCCCHHHHH-------------------HHHH
Confidence            445554     2466778888999999999886 67777643    35566554321                   2345


Q ss_pred             HHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCch--------HHH------HhhccHH--
Q 018834          125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA--------SFY------LSHLPGH--  188 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~--------s~~------L~rl~g~--  188 (350)
                      .|..+++|+|++++|.|.|+|+.|+++||++++++++.|+.+..    ++..|.        +..      +.+.-|.  
T Consensus        53 ~l~~~~~pvva~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~----v~~~~~~~~~~K~~~~~~~~~~~~A~~~gr~~  128 (178)
T cd07021          53 LILNSPIPTIAYVNDRAASAGALIALAADEIYMAPGATIGAAEP----IPGDGNGAADEKVQSYWRAKMRAAAEKKGRDP  128 (178)
T ss_pred             HHHhCCCCEEEEECCchHHHHHHHHHhCCeEEECCCCeEecCee----EcCCCccchhHHHHHHHHHHHHHHHHHhCCCH
Confidence            57789999999999999999999999999999999999998744    333333        111      1111121  


Q ss_pred             H-HHHHhhcC-------------CCCCHHHHHHCCCCccccCC
Q 018834          189 L-GEFLALTG-------------AKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       189 ~-a~~l~ltG-------------~~l~a~eA~~~GLv~~vv~~  217 (350)
                      . +..|+--.             -.++++||++.|++|.++++
T Consensus       129 ~~a~~mv~~~~~v~~~~~~~~~~l~lta~eA~~~g~~d~ia~~  171 (178)
T cd07021         129 DIAEAMVDKDIEVPGVGIKGGELLTLTADEALKVGYAEGIAGS  171 (178)
T ss_pred             HHHHHHhhhhcccccccccccceeeeCHHHHHHhCCeEEEECC
Confidence            1 33443333             27999999999999999764

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall

>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease

Probab=98.60  E-value=6.7e-07  Score=77.36  Aligned_cols=137  Identities=10%  Similarity=0.202  Sum_probs=97.3

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834           57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI  136 (350)
Q Consensus        57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~  136 (350)
                      .++..+..-|.+.++.++.| +++.|+|.=    =|.||++....                   .+...|...++||++.
T Consensus         9 ~I~~~~~~~l~~~l~~A~~~-~~~~i~l~i----nSPGG~v~~~~-------------------~I~~~i~~~~~pvv~~   64 (172)
T cd07015           9 QITSYTYDQFDRYITIAEQD-NAEAIIIEL----DTPGGRADAAG-------------------NIVQRIQQSKIPVIIY   64 (172)
T ss_pred             EECHhHHHHHHHHHHHHhcC-CCCeEEEEE----ECCCCCHHHHH-------------------HHHHHHHhcCcCEEEE
Confidence            36677788888999988865 577777743    36666654321                   1233355679999999


Q ss_pred             EC---CcccccccccccccCEEEEeCCeeEecccccccccCC----Cc----hHHHHhhc------cH---HHHHHHhhc
Q 018834          137 LN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD----AG----ASFYLSHL------PG---HLGEFLALT  196 (350)
Q Consensus       137 i~---G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~----~G----~s~~L~rl------~g---~~a~~l~lt  196 (350)
                      ++   |.|..+|.-++++||.+++.+++.++....-.|..++    ..    .++.+.++      -|   ..+..++-.
T Consensus        65 v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v~~  144 (172)
T cd07015          65 VYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFITK  144 (172)
T ss_pred             EecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHHHh
Confidence            99   9999999999999999999999999987764433221    00    01222222      12   124566677


Q ss_pred             CCCCCHHHHHHCCCCccccCC
Q 018834          197 GAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       197 G~~l~a~eA~~~GLv~~vv~~  217 (350)
                      ...++++||+++|++|+++.+
T Consensus       145 ~~~lta~EA~~~G~iD~ia~~  165 (172)
T cd07015         145 DLSLTPEEALKYGVIEVVARD  165 (172)
T ss_pred             hcCcCHHHHHHcCCceeeeCC
Confidence            788999999999999999875

Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle

>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=98.55  E-value=6.4e-07  Score=76.98  Aligned_cols=132  Identities=13%  Similarity=0.067  Sum_probs=86.5

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL  137 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i  137 (350)
                      ++..+...+.+.|..++.++.++.|+|.=    =|.||++..-                   ..+...|...++|+++.+
T Consensus         9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~I----nSpGG~v~~~-------------------~~i~~~i~~~~~~v~~~~   65 (162)
T cd07013           9 VEDISANQFAAQLLFLGAVNPEKDIYLYI----NSPGGDVFAG-------------------MAIYDTIKFIKADVVTII   65 (162)
T ss_pred             ECcHHHHHHHHHHHHHhcCCCCCCEEEEE----ECCCCcHHHH-------------------HHHHHHHHhcCCCceEEE
Confidence            46788999999999999987777666643    3556654321                   123334556789999999


Q ss_pred             CCcccccccccccccC--EEEEeCCeeEecccccccccCCCchH--HH----Hhh-----------ccHH--H-HHHHhh
Q 018834          138 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS--FY----LSH-----------LPGH--L-GEFLAL  195 (350)
Q Consensus       138 ~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s--~~----L~r-----------l~g~--~-a~~l~l  195 (350)
                      .|.|.++|.-|+++||  .|++.+++.|.+....-|...  ...  ..    +.+           ..|.  . -..++-
T Consensus        66 ~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g--~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~  143 (162)
T cd07013          66 DGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLG--DATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLE  143 (162)
T ss_pred             EeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccC--CHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHc
Confidence            9999999999999999  677777777765433222111  111  00    111           0111  1 133445


Q ss_pred             cCCCCCHHHHHHCCCCccc
Q 018834          196 TGAKLNGAEMMACGLATHY  214 (350)
Q Consensus       196 tG~~l~a~eA~~~GLv~~v  214 (350)
                      .+..++|+||+++||||++
T Consensus       144 ~~~~~sa~eA~~~GliD~i  162 (162)
T cd07013         144 RDTWLSAREAVEYGFADTI  162 (162)
T ss_pred             CCccccHHHHHHcCCCCcC
Confidence            5666799999999999975

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas

>PRK10949 protease 4; Provisional

Probab=98.52  E-value=1.5e-06  Score=89.28  Aligned_cols=165  Identities=16%  Similarity=0.179  Sum_probs=103.3

Q ss_pred             eCCEEEEEEcC-----CCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           41 KANSRMAILNR-----PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        41 ~~~v~~ItLnr-----p~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      .+.|++|+++-     ....+.++.   +.+.+.|+.+..|++||+|||+-+    |.|+.....               
T Consensus       325 ~~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrIn----SpGGs~~as---------------  382 (618)
T PRK10949        325 GGSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVN----SPGGSVTAS---------------  382 (618)
T ss_pred             CCeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEec----CCCCcHHHH---------------
Confidence            45677776652     222234444   456788889999999999999865    444433211               


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEec-------cc-----ccccccCCCchHHH--
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT-------PE-----TLIGFHPDAGASFY--  181 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~-------Pe-----~~iGl~P~~G~s~~--  181 (350)
                       ..+++.+..+....||||+.+.|.|..||..++++||.++|.+.+..+-       |.     -++|+-+++-.+-.  
T Consensus       383 -e~i~~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~~~  461 (618)
T PRK10949        383 -EVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSPLA  461 (618)
T ss_pred             -HHHHHHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccccC
Confidence             1122233334456899999999999999999999999999999764332       11     13444333211110  


Q ss_pred             ---------------Hhhcc-----------------HHHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHH
Q 018834          182 ---------------LSHLP-----------------GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGK  229 (350)
Q Consensus       182 ---------------L~rl~-----------------g~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~  229 (350)
                                     +...+                 ...-..-+..|+.++|++|++.||||++-   .++++.+.+++
T Consensus       462 ~~~~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~~~~~~v~~ia~Grv~tg~~A~~~GLVD~lG---~~~~ai~~a~~  538 (618)
T PRK10949        462 DVSITKALPPEFQQMMQLSIENGYKRFITLVADSRHKTPEQIDKIAQGHVWTGQDAKANGLVDSLG---DFDDAVAKAAE  538 (618)
T ss_pred             CccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHhcCCcccHHHHHHcCCCccCC---CHHHHHHHHHH
Confidence                           11111                 00112234689999999999999999984   46665555555


Q ss_pred             hc
Q 018834          230 LV  231 (350)
Q Consensus       230 l~  231 (350)
                      ++
T Consensus       539 ~a  540 (618)
T PRK10949        539 LA  540 (618)
T ss_pred             Hc
Confidence            44

>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=98.47  E-value=7.9e-07  Score=79.05  Aligned_cols=135  Identities=16%  Similarity=0.074  Sum_probs=83.1

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834           57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI  136 (350)
Q Consensus        57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~  136 (350)
                      .++..+...+...|..++.++..+-|.|.=    =|.|||+..-.                   .+...|...+.|+++.
T Consensus        39 ~I~~~~~~~i~~~L~~l~~~~~~~~I~l~I----nSpGG~v~~g~-------------------~I~d~i~~~~~~v~t~   95 (200)
T PRK00277         39 EVEDHMANLIVAQLLFLEAEDPDKDIYLYI----NSPGGSVTAGL-------------------AIYDTMQFIKPDVSTI   95 (200)
T ss_pred             EECHHHHHHHHHHHHHhhccCCCCCEEEEE----ECCCCcHHHHH-------------------HHHHHHHhcCCCEEEE
Confidence            477889999999999888765444333321    24455553211                   1223355667899999


Q ss_pred             ECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchHH-------H-----------HhhccHH---HHHHH
Q 018834          137 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF-------Y-----------LSHLPGH---LGEFL  193 (350)
Q Consensus       137 i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s~-------~-----------L~rl~g~---~a~~l  193 (350)
                      ++|.|.+.|.-|+++++  .|++.+++++.+....-|.   .|-+.       .           ++...|.   ....+
T Consensus        96 ~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~~~  172 (200)
T PRK00277         96 CIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGF---QGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIEKD  172 (200)
T ss_pred             EEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccc---cCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence            99999999998888743  4666655555543332111   11111       1           1111221   12334


Q ss_pred             hhcCCCCCHHHHHHCCCCccccCC
Q 018834          194 ALTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       194 ~ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      +-.+..++|+||+++||||+++.+
T Consensus       173 ~~~~~~lsa~EA~e~GliD~Ii~~  196 (200)
T PRK00277        173 TDRDNFMSAEEAKEYGLIDEVLTK  196 (200)
T ss_pred             hhCCccccHHHHHHcCCccEEeec
Confidence            456778999999999999999875

>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]

Probab=98.44  E-value=6.7e-07  Score=84.41  Aligned_cols=168  Identities=18%  Similarity=0.070  Sum_probs=131.2

Q ss_pred             CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHHHHHHHHHHH
Q 018834           43 NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYS  121 (350)
Q Consensus        43 ~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~  121 (350)
                      ++..++++ |+ .|..|.++..+|..-++.+..+..+++..+++.. +.|+||.|..+..-    +.......++-++.+
T Consensus        66 ~~~~~dmv-ie-av~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vv----g~h~fspa~~m~LlE  139 (380)
T KOG1683|consen   66 GFANADMV-IE-AVFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVV----GMHFFSPAHWMQLLE  139 (380)
T ss_pred             ccccccee-cc-chhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhc----cccccCHHHHHHHHH
Confidence            67778887 66 4999999999999999999999889999999987 89999999988763    233333445566778


Q ss_pred             HHHHHhcCCCcEEEEECCcccccc--cccccccCEEEEeC--CeeEecccccccc-cCCCchHHHHhhccHHH-HHHHhh
Q 018834          122 FIYLLGTHLKPHVAILNGVTMGGG--AGVSIPGTFRVACG--KTVFATPETLIGF-HPDAGASFYLSHLPGHL-GEFLAL  195 (350)
Q Consensus       122 l~~~i~~~~kP~Ia~i~G~~~GgG--~~Lal~~D~riate--~a~f~~Pe~~iGl-~P~~G~s~~L~rl~g~~-a~~l~l  195 (350)
                      ++...++++.|+.+++||.+--|+  +-+.-+|+||+..-  .=..+..+...++ .|.+-.-.+... .|.. |..-+-
T Consensus       140 ii~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~-fGf~~g~~~L~  218 (380)
T KOG1683|consen  140 IILALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSLITK-FGFRVGERALA  218 (380)
T ss_pred             HHHhcCCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHHHHh-cCccccHHHHh
Confidence            899999999999999999999998  78899999999873  3334567777774 333322222322 3444 555556


Q ss_pred             cCCCCCHHHHHHCCCCccccCC
Q 018834          196 TGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       196 tG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      -|.-++-.||++-|+++.+.|.
T Consensus       219 d~~gfdv~eal~~gl~~~~~~r  240 (380)
T KOG1683|consen  219 DGVGFDVAEALAVGLGDEIGPR  240 (380)
T ss_pred             hccCccHHHHHhhccchhccch
Confidence            7888999999999999999885

>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional

Probab=98.27  E-value=9.4e-05  Score=68.03  Aligned_cols=138  Identities=16%  Similarity=0.086  Sum_probs=93.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      ..+++.+-.+...+.++.+... ++-+|-|.-++.++. |.+-.             .....+...++...+.....|+|
T Consensus        76 ~G~~~~~g~rKa~R~~~lA~~~-~lPvV~lvDtpGa~~-g~~aE-------------~~G~~~~ia~~~~~~s~~~VP~I  140 (256)
T PRK12319         76 FGQPHPEGYRKALRLMKQAEKF-GRPVVTFINTAGAYP-GVGAE-------------ERGQGEAIARNLMEMSDLKVPII  140 (256)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCcCC-CHhHH-------------hccHHHHHHHHHHHHhCCCCCEE
Confidence            4678889999999999888775 456665544333332 32211             01122344456677788999999


Q ss_pred             EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH--HHHHHhhcCCCCCHHHHHHCCCCc
Q 018834          135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--LGEFLALTGAKLNGAEMMACGLAT  212 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~--~a~~l~ltG~~l~a~eA~~~GLv~  212 (350)
                      ++|-|.|.|||......||++++.+++.|+       +.++-|++..+-+-...  .+.++.    .+++.++.+.|+||
T Consensus       141 sVI~G~~~gGgA~a~~~~D~v~m~~~a~~~-------v~~pe~~a~il~~~~~~a~~aa~~~----~~~a~~l~~~g~iD  209 (256)
T PRK12319        141 AIIIGEGGSGGALALAVADQVWMLENTMYA-------VLSPEGFASILWKDGSRATEAAELM----KITAGELLEMGVVD  209 (256)
T ss_pred             EEEeCCcCcHHHHHhhcCCEEEEecCceEE-------EcCHHHHHHHHhcCcccHHHHHHHc----CCCHHHHHHCCCCc
Confidence            999999988888777789999999988766       33334444444332111  223332    77999999999999


Q ss_pred             cccCCC
Q 018834          213 HYSVSE  218 (350)
Q Consensus       213 ~vv~~~  218 (350)
                      .|+|+.
T Consensus       210 ~ii~e~  215 (256)
T PRK12319        210 KVIPEH  215 (256)
T ss_pred             EecCCC
Confidence            999854

>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.25  E-value=1.5e-05  Score=75.96  Aligned_cols=82  Identities=20%  Similarity=0.301  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Q 018834           62 MGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVT  141 (350)
Q Consensus        62 m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~  141 (350)
                      -.+.+.+.|+.+..|++++.|+|.=    =|.||.+..-                ..+++.+.++..-. ||++.|+++|
T Consensus        81 ~~~~~~~~l~~~~~~~~vk~vvL~i----nSPGG~v~as----------------~~i~~~l~~l~~~~-PV~v~v~~~A  139 (317)
T COG0616          81 GGDDIEEILRAARADPSVKAVVLRI----NSPGGSVVAS----------------ELIARALKRLRAKK-PVVVSVGGYA  139 (317)
T ss_pred             cHHHHHHHHHHHhcCCCCceEEEEE----ECcCCchhHH----------------HHHHHHHHHHhhcC-CEEEEECCee
Confidence            3556677788889999999998853    4566654321                12233334444444 9999999999


Q ss_pred             cccccccccccCEEEEeCCeeEe
Q 018834          142 MGGGAGVSIPGTFRVACGKTVFA  164 (350)
Q Consensus       142 ~GgG~~Lal~~D~riate~a~f~  164 (350)
                      +.||.-++++||.+||++++..+
T Consensus       140 ASGGY~IA~aAd~I~a~p~si~G  162 (317)
T COG0616         140 ASGGYYIALAADKIVADPSSITG  162 (317)
T ss_pred             cchhhhhhccCCEEEecCCceee
Confidence            99999999999999999998666

>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=98.24  E-value=6e-06  Score=73.80  Aligned_cols=143  Identities=15%  Similarity=0.069  Sum_probs=95.9

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      .+|.|+-     -++..+..++.+.|..++..+..+.|.|.=    =|.||++..-.                   .+..
T Consensus        36 r~I~l~g-----~I~~~~~~~i~~~L~~l~~~~~~~~I~l~I----NSpGG~v~~g~-------------------~I~d   87 (207)
T PRK12553         36 RIIFLGG-----QVDDASANDVMAQLLVLESIDPDRDITLYI----NSPGGSVTAGD-------------------AIYD   87 (207)
T ss_pred             eEEEEcc-----eECHHHHHHHHHHHHHHHhCCCCCCEEEEE----eCCCCcHHHHH-------------------HHHH
Confidence            4455653     377899999999999998755334333321    24556554311                   1333


Q ss_pred             HHhcCCCcEEEEECCcccccccccccccC--EEEEeCCeeEecccccc-cccCCCchH------------------HHHh
Q 018834          125 LLGTHLKPHVAILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLI-GFHPDAGAS------------------FYLS  183 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~i-Gl~P~~G~s------------------~~L~  183 (350)
                      .|..++.|+++.+.|.|.+.|.-|.++||  .|++.+++.|.+-.... |.  ..|-.                  ..+.
T Consensus        88 ~i~~~~~~v~t~~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~--~~G~a~d~~~~~~~l~~~~~~~~~~ya  165 (207)
T PRK12553         88 TIQFIRPDVQTVCTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGG--IRGQASDLEIQAREILRMRERLERILA  165 (207)
T ss_pred             HHHhcCCCcEEEEEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCC--CccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45567789999999999999999999999  69999999988876543 21  12211                  1111


Q ss_pred             hccHH---HHHHHhhcCCCCCHHHHHHCCCCccccCC
Q 018834          184 HLPGH---LGEFLALTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       184 rl~g~---~a~~l~ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      +..|.   ....++-.+..++|+||+++||||+++.+
T Consensus       166 ~~tg~~~e~i~~~~~~~~~lta~EA~e~GliD~I~~~  202 (207)
T PRK12553        166 EHTGQSVEKIRKDTDRDKWLTAEEAKDYGLVDQIITS  202 (207)
T ss_pred             HHhCCCHHHHHHHHhcCccccHHHHHHcCCccEEcCc
Confidence            11221   13345557889999999999999999865

>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease

Probab=98.23  E-value=7.8e-06  Score=70.89  Aligned_cols=132  Identities=17%  Similarity=0.090  Sum_probs=91.0

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL  137 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i  137 (350)
                      ++.++...+...+..++.++..+.|+|.=    =|.|||+..-.                   .+...|...+.|+++.+
T Consensus        18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~i----nSpGG~v~~~~-------------------~i~~~l~~~~~~v~t~~   74 (171)
T cd07017          18 IDDEVANLIIAQLLYLESEDPKKPIYLYI----NSPGGSVTAGL-------------------AIYDTMQYIKPPVSTIC   74 (171)
T ss_pred             EcHHHHHHHHHHHHHHHccCCCCceEEEE----ECCCCCHHHHH-------------------HHHHHHHhcCCCEEEEE
Confidence            56788999999999999876655554432    24555554321                   12223445689999999


Q ss_pred             CCcccccccccccccC--EEEEeCCeeEecccccccccCCCchHHH------Hhhc-----------cHH--H-HHHHhh
Q 018834          138 NGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASFY------LSHL-----------PGH--L-GEFLAL  195 (350)
Q Consensus       138 ~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s~~------L~rl-----------~g~--~-a~~l~l  195 (350)
                      .|.|.++|.-+++++|  .|++.+++.|.+-+...+..-.  ..-.      +.++           .|.  . -..++-
T Consensus        75 ~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~--~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~  152 (171)
T cd07017          75 LGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQ--ASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTD  152 (171)
T ss_pred             EeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhh
Confidence            9999999999999999  7999999999888876554322  1111      1010           111  1 133445


Q ss_pred             cCCCCCHHHHHHCCCCccc
Q 018834          196 TGAKLNGAEMMACGLATHY  214 (350)
Q Consensus       196 tG~~l~a~eA~~~GLv~~v  214 (350)
                      .+..++++||+++||+|+|
T Consensus       153 ~~~~lta~EA~e~GiiD~V  171 (171)
T cd07017         153 RDRYMSAEEAKEYGLIDKI  171 (171)
T ss_pred             CCccccHHHHHHcCCCccC
Confidence            7888999999999999975

Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ

>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=98.16  E-value=2.1e-05  Score=69.73  Aligned_cols=137  Identities=15%  Similarity=0.088  Sum_probs=87.4

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL  137 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i  137 (350)
                      ++..+...+.+.|..++..+..+.|.|.=    =|.||++..-.                   .+...|...+.||++.+
T Consensus        32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~I----NSpGG~v~ag~-------------------aI~d~i~~~~~~V~t~v   88 (197)
T PRK14512         32 INKDLSELFQEKILLLEALDSKKPIFVYI----DSEGGDIDAGF-------------------AIFNMIRFVKPKVFTIG   88 (197)
T ss_pred             EcHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECCCCCHHHHH-------------------HHHHHHHhCCCCEEEEE
Confidence            66788889999888887623334333321    25566654311                   23334556788999999


Q ss_pred             CCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHH----HHhhccHHH--------------HHHHhhcC
Q 018834          138 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----YLSHLPGHL--------------GEFLALTG  197 (350)
Q Consensus       138 ~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~----~L~rl~g~~--------------a~~l~ltG  197 (350)
                      +|.|.+.|.-|+++||-  |++.++++|-+-...-|+.....-..    .+-+.....              ...++-..
T Consensus        89 ~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~~d  168 (197)
T PRK14512         89 VGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTDRD  168 (197)
T ss_pred             EeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhhcC
Confidence            99999999999999985  99999998866554333311111000    111111111              23334445


Q ss_pred             CCCCHHHHHHCCCCccccCC
Q 018834          198 AKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       198 ~~l~a~eA~~~GLv~~vv~~  217 (350)
                      ..++|+||+++||||+|+++
T Consensus       169 ~~lta~EA~~yGliD~I~~~  188 (197)
T PRK14512        169 FWLDSSSAVKYGLVFEVVET  188 (197)
T ss_pred             cccCHHHHHHcCCccEeecC
Confidence            78999999999999999975

>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional

Probab=98.10  E-value=0.00012  Score=68.96  Aligned_cols=139  Identities=12%  Similarity=0.013  Sum_probs=91.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      ..+++++-.+...+.++.++.. ++-+|-|--++++++ |.+-.+             ....+...+....+.....|+|
T Consensus       132 ~G~~~p~g~rKa~Rlm~lA~~f-~lPIItlvDTpGA~~-G~~AE~-------------~G~~~aiar~l~~~a~~~VP~I  196 (322)
T CHL00198        132 FGMPSPGGYRKALRLMKHANKF-GLPILTFIDTPGAWA-GVKAEK-------------LGQGEAIAVNLREMFSFEVPII  196 (322)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcCc-CHHHHH-------------HhHHHHHHHHHHHHHcCCCCEE
Confidence            4678899999999999988875 455555443333333 321111             1112334445566678899999


Q ss_pred             EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHHHHCCCCccc
Q 018834          135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY  214 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA~~~GLv~~v  214 (350)
                      ++|-|.+.|||.-....||++++.+++.|+       +.++-|++..|-+-.... .. +-...+++|+|++++|+||.|
T Consensus       197 sVViGeggsGGAlal~~aD~V~m~e~a~~s-------VisPEg~a~Il~~d~~~a-~~-aA~~~~ita~dL~~~giiD~i  267 (322)
T CHL00198        197 CTIIGEGGSGGALGIGIGDSIMMLEYAVYT-------VATPEACAAILWKDSKKS-LD-AAEALKITSEDLKVLGIIDEI  267 (322)
T ss_pred             EEEeCcccHHHHHhhhcCCeEEEeCCeEEE-------ecCHHHHHHHHhcchhhH-HH-HHHHcCCCHHHHHhCCCCeEe
Confidence            999999987776544459999999998776       444444454454432221 11 223357899999999999999


Q ss_pred             cCC
Q 018834          215 SVS  217 (350)
Q Consensus       215 v~~  217 (350)
                      +|.
T Consensus       268 i~E  270 (322)
T CHL00198        268 IPE  270 (322)
T ss_pred             ccC
Confidence            985

>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=98.06  E-value=1.1e-05  Score=70.59  Aligned_cols=142  Identities=18%  Similarity=0.209  Sum_probs=92.1

Q ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCce--EEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834           46 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI  123 (350)
Q Consensus        46 ~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (350)
                      +|.|+.|     +|.++...+.+.|..++.++..+  .|.|.      |.|||+..-.                   .+.
T Consensus        18 ~i~l~g~-----I~~~~~~~~~~~L~~l~~~~~~~~i~i~IN------SpGG~v~~g~-------------------~i~   67 (182)
T PF00574_consen   18 IIFLNGP-----IDEESANRLISQLLYLENEDKNKPINIYIN------SPGGDVDAGL-------------------AIY   67 (182)
T ss_dssp             EEEEESS-----BSHHHHHHHHHHHHHHHHHTSSSEEEEEEE------ECEBCHHHHH-------------------HHH
T ss_pred             EEEECCc-----cCHHHHHHHHHHHHHHhccCCCceEEEEEc------CCCCccHHHH-------------------HHH
Confidence            3455543     78899999999888775333322  23344      4566654321                   234


Q ss_pred             HHHhcCCCcEEEEECCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHH----HHhhccHHH--------
Q 018834          124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----YLSHLPGHL--------  189 (350)
Q Consensus       124 ~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~----~L~rl~g~~--------  189 (350)
                      ..|..++.|+++.+.|.|.+.|.-+.++|+.  |++.+++.|.+-+...+......-..    .+.+.....        
T Consensus        68 ~~i~~~~~~v~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~t  147 (182)
T PF00574_consen   68 DAIRSSKAPVTTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERT  147 (182)
T ss_dssp             HHHHHSSSEEEEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCeEEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHh
Confidence            4567789999999999999999999999999  99999999999888666533111100    111111111        


Q ss_pred             ------HHHHhhcCCCCCHHHHHHCCCCccccCC
Q 018834          190 ------GEFLALTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       190 ------a~~l~ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                            -..++-....++++||+++||||+|+.+
T Consensus       148 g~~~~~i~~~~~~~~~l~a~EA~~~GiiD~I~~~  181 (182)
T PF00574_consen  148 GLSKEEIEELMDRDTWLSAEEALEYGIIDEIIES  181 (182)
T ss_dssp             TS-HHHHHHHCSSTEEEEHHHHHHHTSSSEEESS
T ss_pred             CCcHHHHHHHHhCCccccHHHHHHcCCCCEeccC
Confidence                  1233344566899999999999999764

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....

>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit

Probab=98.03  E-value=0.00089  Score=63.18  Aligned_cols=136  Identities=13%  Similarity=0.060  Sum_probs=90.9

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      ..+++.+-.+...+.++.++.- ++-+|-|.-++++++ |.+..+             ....+...++...+.....|+|
T Consensus       129 ~G~~~p~g~rKa~R~m~lA~~f-~iPvVtlvDTpGa~~-g~~aE~-------------~G~~~aia~~l~a~s~~~VP~I  193 (316)
T TIGR00513       129 FGMPAPEGYRKALRLMKMAERF-KMPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLGVPVI  193 (316)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCCCC-CHHHHH-------------HHHHHHHHHHHHHHHcCCCCEE
Confidence            4678899999999999888765 556665543333333 322111             1123344556667788999999


Q ss_pred             EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH--HH-HHHHhhcCCCCCHHHHHHCCCC
Q 018834          135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HL-GEFLALTGAKLNGAEMMACGLA  211 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g--~~-a~~l~ltG~~l~a~eA~~~GLv  211 (350)
                      ++|-|.|.|||..-...||++++.+++.++       +.++-|++..|-+-..  .. +.+     ..+++.++.+.|+|
T Consensus       194 sVViGeggsGGAla~~~aD~v~m~~~a~~s-------VisPEg~a~Il~kd~~~a~~aae~-----~~~ta~~l~~~G~i  261 (316)
T TIGR00513       194 CTVIGEGGSGGALAIGVGDKVNMLEYSTYS-------VISPEGCAAILWKDASKAPKAAEA-----MKITAPDLKELGLI  261 (316)
T ss_pred             EEEecccccHHHhhhccCCEEEEecCceEE-------ecCHHHHHHHhccchhhHHHHHHH-----ccCCHHHHHHCCCC
Confidence            999999977776544469999999988765       4444445544544221  12 333     56689999999999


Q ss_pred             ccccCC
Q 018834          212 THYSVS  217 (350)
Q Consensus       212 ~~vv~~  217 (350)
                      |.|+|.
T Consensus       262 D~II~e  267 (316)
T TIGR00513       262 DSIIPE  267 (316)
T ss_pred             eEeccC
Confidence            999985

The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.

>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated

Probab=97.98  E-value=0.00076  Score=63.72  Aligned_cols=139  Identities=12%  Similarity=0.063  Sum_probs=93.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      ..+++.+-.+...+.++.++.- ++-+|-|.-++++++ |.+-.+             ....+...++...+.....|+|
T Consensus       129 ~G~~~peg~rKa~R~m~lA~~f-~lPIVtlvDTpGa~~-G~~aE~-------------~G~~~aia~~l~~~a~~~VP~I  193 (319)
T PRK05724        129 FGMPRPEGYRKALRLMKMAEKF-GLPIITFIDTPGAYP-GIGAEE-------------RGQSEAIARNLREMARLKVPII  193 (319)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCCCC-CHHHHh-------------ccHHHHHHHHHHHHhCCCCCEE
Confidence            4668899999999998888765 566665554433333 322110             1123444556777889999999


Q ss_pred             EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHHHHCCCCccc
Q 018834          135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY  214 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA~~~GLv~~v  214 (350)
                      ++|-|.+.|||......||++++.+++.|+       ..++-|++..|.+-... +... -.-..+++.++.+.|+||.|
T Consensus       194 sVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~~-a~~a-ae~~~ita~~l~~~g~iD~I  264 (319)
T PRK05724        194 CTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDASK-APEA-AEAMKITAQDLKELGIIDEI  264 (319)
T ss_pred             EEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCchh-HHHH-HHHcCCCHHHHHHCCCceEe
Confidence            999999977776444459999999887665       55555555555543322 1111 11456899999999999999


Q ss_pred             cCC
Q 018834          215 SVS  217 (350)
Q Consensus       215 v~~  217 (350)
                      +|.
T Consensus       265 I~E  267 (319)
T PRK05724        265 IPE  267 (319)
T ss_pred             ccC
Confidence            985

>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP

Probab=97.96  E-value=0.00011  Score=64.93  Aligned_cols=144  Identities=15%  Similarity=0.058  Sum_probs=91.3

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      .+|.|.-|     ++..+...+...|..++.++..+-|.|.=    =|.|||+..-.                   .+..
T Consensus        27 riI~l~g~-----I~~~~~~~ii~~L~~l~~~~~~~~i~l~I----nSpGG~v~~g~-------------------~I~d   78 (191)
T TIGR00493        27 RIIFLSGE-----VNDSVANLIVAQLLFLEAEDPEKDIYLYI----NSPGGSITAGL-------------------AIYD   78 (191)
T ss_pred             eEEEEccE-----EChHHHHHHHHHHHHhhccCCCCCEEEEE----ECCCCCHHHHH-------------------HHHH
Confidence            44556443     66788888989888888765444444321    24466653211                   1222


Q ss_pred             HHhcCCCcEEEEECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchH----HHHhhc-----------cH
Q 018834          125 LLGTHLKPHVAILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS----FYLSHL-----------PG  187 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s----~~L~rl-----------~g  187 (350)
                      .|..++.|+...+.|.|.+.|.-|++++|  .|++.+++.|.+.+..-|......-.    ..+.++           .|
T Consensus        79 ~l~~~~~~v~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg  158 (191)
T TIGR00493        79 TMQFIKPDVSTICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTG  158 (191)
T ss_pred             HHHhcCCCEEEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHC
Confidence            34556677888889999999988888765  69999999998866544432211111    111111           12


Q ss_pred             H---HHHHHhhcCCCCCHHHHHHCCCCccccC
Q 018834          188 H---LGEFLALTGAKLNGAEMMACGLATHYSV  216 (350)
Q Consensus       188 ~---~a~~l~ltG~~l~a~eA~~~GLv~~vv~  216 (350)
                      .   ....++-.+..++|+||+++||||+++.
T Consensus       159 ~~~~~i~~~~~~~~~lta~EA~~~GliD~ii~  190 (191)
T TIGR00493       159 QSLEQIEKDTERDFFMSAEEAKEYGLIDSVLT  190 (191)
T ss_pred             cCHHHHHHHhhCCccCcHHHHHHcCCccEEec
Confidence            1   1234556678899999999999999874

This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.

>PRK11778 putative inner membrane peptidase; Provisional

Probab=97.96  E-value=4.1e-05  Score=72.74  Aligned_cols=101  Identities=10%  Similarity=0.059  Sum_probs=64.0

Q ss_pred             eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834           41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY  120 (350)
Q Consensus        41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      .+.|++|.++-+=..+. ...+-+++...++.+..+   .+|||+-+    |.||.+.....         ..   .   
T Consensus        89 ~~~v~VI~~~G~I~~~~-~~~l~e~i~a~l~~A~~~---~aVvLrid----SpGG~v~~s~~---------a~---~---  145 (330)
T PRK11778         89 KPRLFVLDFKGDIDASE-VESLREEITAILAVAKPG---DEVLLRLE----SPGGVVHGYGL---------AA---S---  145 (330)
T ss_pred             CCeEEEEEEEEEECCCc-chhhHHHHHHHHHhccCC---CeEEEEEe----CCCCchhHHHH---------HH---H---
Confidence            45788888874432111 123445566656555433   46777643    44554432110         00   0   


Q ss_pred             HHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEec
Q 018834          121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT  165 (350)
Q Consensus       121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~  165 (350)
                       ...++....||+++.+++.|..||..++++||.+++.+.+.++-
T Consensus       146 -~l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGS  189 (330)
T PRK11778        146 -QLQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGS  189 (330)
T ss_pred             -HHHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEe
Confidence             12334567899999999999999999999999999999886653

>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit

Probab=97.94  E-value=6.5e-05  Score=66.68  Aligned_cols=144  Identities=14%  Similarity=0.085  Sum_probs=94.7

Q ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHH
Q 018834           46 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL  125 (350)
Q Consensus        46 ~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~  125 (350)
                      +|-|+-|     +|.++.+.+...|..++.++..+-|.|.=    =|.|||+..-                   ..+...
T Consensus        32 iifl~~~-----i~~~~a~~ii~~ll~L~~~~~~~~I~l~I----NSpGG~v~~g-------------------~aIyd~   83 (200)
T CHL00028         32 LLFLGQE-----VDDEIANQLIGLMVYLSIEDDTKDLYLFI----NSPGGSVISG-------------------LAIYDT   83 (200)
T ss_pred             EEEECCe-----ecHHHHHHHHHHHHHHhccCCCCCEEEEE----eCCCcchhhH-------------------HHHHHH
Confidence            4455544     88999999999999988654334333211    2445554321                   113334


Q ss_pred             HhcCCCcEEEEECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchHHH------HhhccHHH--------
Q 018834          126 LGTHLKPHVAILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASFY------LSHLPGHL--------  189 (350)
Q Consensus       126 i~~~~kP~Ia~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s~~------L~rl~g~~--------  189 (350)
                      |...+.||.+.+.|.|.+.|.-|.+++|  .|++.++++|-+.....|+.-+ -++-.      +-++....        
T Consensus        84 m~~~~~~V~Tv~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G-~a~di~~~a~~l~~~~~~~~~~ya~~T  162 (200)
T CHL00028         84 MQFVKPDVHTICLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEG-QASEFVLEAEELLKLRETITRVYAQRT  162 (200)
T ss_pred             HHhcCCCEEEEEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5677889999999999999999999998  6999999999887766553111 11111      11111111        


Q ss_pred             ------HHHHhhcCCCCCHHHHHHCCCCccccCCC
Q 018834          190 ------GEFLALTGAKLNGAEMMACGLATHYSVSE  218 (350)
Q Consensus       190 ------a~~l~ltG~~l~a~eA~~~GLv~~vv~~~  218 (350)
                            -..++-....++|+||+++||||+|+.+.
T Consensus       163 g~~~e~i~~~~~r~~~lta~EA~eyGliD~I~~~~  197 (200)
T CHL00028        163 GKPLWVISEDMERDVFMSATEAKAYGIVDLVAVNN  197 (200)
T ss_pred             CcCHHHHHHHhhcCccCCHHHHHHcCCCcEEeecC
Confidence                  13344556679999999999999998754

>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional

Probab=97.93  E-value=0.0015  Score=63.31  Aligned_cols=136  Identities=13%  Similarity=0.045  Sum_probs=88.9

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      .+++.+-.+...+.++.++.. ++-+|-|.-+++++ .|.+..+             ....+.+.+..+.+.....|+|+
T Consensus       200 G~~~peGyRKAlR~mklAekf-~lPIVtLVDTpGA~-pG~~AEe-------------~Gqa~aIAr~l~ams~l~VPiIS  264 (431)
T PLN03230        200 AMPQPNGYRKALRFMRHAEKF-GFPILTFVDTPGAY-AGIKAEE-------------LGQGEAIAFNLREMFGLRVPIIA  264 (431)
T ss_pred             CCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcC-CCHHHHH-------------HhHHHHHHHHHHHHhcCCCCEEE
Confidence            568899999999999988875 45555544332332 3322211             11223444566677899999999


Q ss_pred             EECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH-H-HHHHHhhcCCCCCHHHHHHCCCCcc
Q 018834          136 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-H-LGEFLALTGAKLNGAEMMACGLATH  213 (350)
Q Consensus       136 ~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g-~-~a~~l~ltG~~l~a~eA~~~GLv~~  213 (350)
                      +|-|.+.|||......||++++.+++.++       +.++-|++..|-+-.. . .+..    ...+++.++++.|+||.
T Consensus       265 VViGeGgSGGAlalg~aD~VlMle~A~ys-------VisPEgaAsILwkd~~~A~eAAe----alkitA~dL~~~GiID~  333 (431)
T PLN03230        265 TVIGEGGSGGALAIGCGNRMLMMENAVYY-------VASPEACAAILWKSAAAAPKAAE----ALRITAAELVKLGVVDE  333 (431)
T ss_pred             EEeCCCCcHHHHHhhcCCEEEEecCCEEE-------ecCHHHHHHHHhccccchHHHHH----HcCCCHHHHHhCCCCeE
Confidence            99999955554433468999999988665       4433444444433221 1 1333    33899999999999999


Q ss_pred             ccCC
Q 018834          214 YSVS  217 (350)
Q Consensus       214 vv~~  217 (350)
                      |+|.
T Consensus       334 II~E  337 (431)
T PLN03230        334 IVPE  337 (431)
T ss_pred             eccC
Confidence            9985

>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional

Probab=97.92  E-value=0.0004  Score=71.36  Aligned_cols=139  Identities=12%  Similarity=-0.006  Sum_probs=92.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      ..+++++-++...+.++.++.. .+-+|-|-=++++++ |.+..+             ....+.+.+....+.....|+|
T Consensus       220 fG~~~peGyRKAlRlmkLAekf-gLPIVtLVDTpGA~p-G~~AEe-------------~Gq~~aIArnl~amasl~VP~I  284 (762)
T PLN03229        220 FGMPTPHGYRKALRMMYYADHH-GFPIVTFIDTPGAYA-DLKSEE-------------LGQGEAIAHNLRTMFGLKVPIV  284 (762)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEECCCcCC-CchhHH-------------HhHHHHHHHHHHHHhCCCCCEE
Confidence            4577888899999998888775 455554443333332 322221             1123444556677788999999


Q ss_pred             EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHHHHCCCCccc
Q 018834          135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY  214 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA~~~GLv~~v  214 (350)
                      ++|-|.|.|||......||++++.+++.|+       +.++-|++..|.+-.... .. +-....|+|+|++++|+||.|
T Consensus       285 SVViGeggSGGAlA~g~aD~VlMle~A~~s-------VisPEgaAsILwkd~~~A-~e-AAe~lkiTa~dL~~lGiiD~I  355 (762)
T PLN03229        285 SIVIGEGGSGGALAIGCANKLLMLENAVFY-------VASPEACAAILWKSAKAA-PK-AAEKLRITAQELCRLQIADGI  355 (762)
T ss_pred             EEEeCCcchHHHHHhhcCCEEEEecCCeEE-------ecCHHHHHHHHhcCcccH-HH-HHHHcCCCHHHHHhCCCCeee
Confidence            999999988877666669999999987654       444444554444432211 11 233457899999999999999


Q ss_pred             cCC
Q 018834          215 SVS  217 (350)
Q Consensus       215 v~~  217 (350)
                      +|.
T Consensus       356 IpE  358 (762)
T PLN03229        356 IPE  358 (762)
T ss_pred             ccC
Confidence            985

>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit

Probab=97.81  E-value=0.0033  Score=57.25  Aligned_cols=154  Identities=11%  Similarity=0.039  Sum_probs=94.6

Q ss_pred             eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHH-HcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAW-ENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~-~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      .|....|.=|+|..  .++.+-.....+.+... +.+.++-+|.|.=+ .+|-.|..-             +.....+..
T Consensus        30 ~G~~V~vIa~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDt-pG~~~g~~a-------------E~~G~~~a~   93 (238)
T TIGR03134        30 AGGKVTVIGVVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDT-PSQAYGRRE-------------ELLGINQAL   93 (238)
T ss_pred             CCEEEEEEEECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeC-CCCCCCHHH-------------HHHHHHHHH
Confidence            34444455566653  78888888888888885 55577776666543 223333211             112222333


Q ss_pred             HHHHHHHh---cCCCcEEEEECCccccccc-ccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH---HHH
Q 018834          120 YSFIYLLG---THLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL---GEF  192 (350)
Q Consensus       120 ~~l~~~i~---~~~kP~Ia~i~G~~~GgG~-~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~---a~~  192 (350)
                      -++.+.+.   ..+.|+|+.|-|.++|||+ .+.+.+|.++|.+++       .++..+.-|++..+.+-....   +..
T Consensus        94 A~l~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A-------~i~vm~~e~aa~I~~~~~~~~~e~a~~  166 (238)
T TIGR03134        94 AHLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGA-------MVHVMDLESMARVTKRSVEELEALAKS  166 (238)
T ss_pred             HHHHHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCc-------EEEecCHHHHHHHHccCHhHHHHHHHh
Confidence            34444444   5569999999999998876 465568887777655       455666666665555433322   222


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCC
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEK  219 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~  219 (350)
                      +-.  ...+...+.++|+||.++++.+
T Consensus       167 ~~~--~a~~~~~~~~~G~vd~vi~~~~  191 (238)
T TIGR03134       167 SPV--FAPGIENFVKLGGVHALLDVAD  191 (238)
T ss_pred             hhh--hccCHHHHHhCCCccEEeCCCC
Confidence            211  2346778999999999998765

Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.

>TIGR03133 malonate_beta malonate decarboxylase, beta subunit

Probab=97.74  E-value=0.00097  Score=61.83  Aligned_cols=150  Identities=12%  Similarity=0.076  Sum_probs=92.0

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcC----CCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           44 SRMAILNRPSALNALNTNMGAKLNKLFKAWEND----PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d----~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      |.++-.+..-..-++....-..+.++++.+..|    ..+-+|.|.-+     .|+.+.+-       . .....+ ...
T Consensus        61 v~v~a~D~t~~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dS-----gGaRlqEg-------~-~~L~~~-a~i  126 (274)
T TIGR03133        61 VVVAAQEGRFQGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLDT-----GGVRLQEA-------N-AGLIAI-AEI  126 (274)
T ss_pred             EEEEEECCCccCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEcC-----CCcChhhh-------H-HHHHHH-HHH
Confidence            344444444456778888888899999888752    12345655433     33333221       1 011111 111


Q ss_pred             HHHHHHHhcCCCcEEEEECCc--ccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH--H-HHHHh
Q 018834          120 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH--L-GEFLA  194 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~--~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~--~-a~~l~  194 (350)
                      +..+..+... .|+|+++-|.  |.||+..++..||++|+++++.+++.           +........|.  . ..+-.
T Consensus       127 ~~~~~~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~a-----------GP~VIe~~~G~e~~~~~d~~  194 (274)
T TIGR03133       127 MRAILDARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA  194 (274)
T ss_pred             HHHHHHHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEecc-----------CHHHHHHhcCCCccCHHHhc
Confidence            2222334444 9999999999  89999999999999999988766541           11112222231  2 44555


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEK  219 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~  219 (350)
                      |..+.+.++.....|++|.+++++.
T Consensus       195 l~~~~lGG~~~~~sG~~D~~v~dd~  219 (274)
T TIGR03133       195 LVWRTTGGKHRFLSGDADVLVEDDV  219 (274)
T ss_pred             ccccccchHhHhhcccceEEeCCHH
Confidence            6666777788889999999998754

Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.

>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed

Probab=97.73  E-value=0.00049  Score=60.86  Aligned_cols=138  Identities=12%  Similarity=0.019  Sum_probs=88.7

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL  137 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i  137 (350)
                      ++.++..++...|..++.++..+-|.|.=    =|.|||+..-.                   .+...|..++-||...+
T Consensus        34 i~~~~a~~ii~~Ll~l~~~~~~~~I~l~I----NSpGG~v~~g~-------------------aIyd~m~~~~~~V~t~~   90 (196)
T PRK12551         34 VTSDSANRIVAQLLFLEAEDPEKDIYLYI----NSPGGSVYDGL-------------------GIFDTMQHVKPDVHTVC   90 (196)
T ss_pred             ecHHHHHHHHHHHHHhhccCCCCCEEEEE----eCCCcchhhHH-------------------HHHHHHHhcCCCEEEEE
Confidence            88899999999999888644333332211    24455554211                   12333556788999999


Q ss_pred             CCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHH----HHhhccHHH--------------HHHHhhcC
Q 018834          138 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF----YLSHLPGHL--------------GEFLALTG  197 (350)
Q Consensus       138 ~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~----~L~rl~g~~--------------a~~l~ltG  197 (350)
                      .|.|.+.|.-|.+++|-  |++.+++++-+-...-|..-...-..    .+-+.....              -..++-..
T Consensus        91 ~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~~~~rd  170 (196)
T PRK12551         91 VGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQEDTDRD  170 (196)
T ss_pred             EEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhhcC
Confidence            99999999999999884  88999998887766433221111111    111111111              12334445


Q ss_pred             CCCCHHHHHHCCCCccccCCC
Q 018834          198 AKLNGAEMMACGLATHYSVSE  218 (350)
Q Consensus       198 ~~l~a~eA~~~GLv~~vv~~~  218 (350)
                      ..++|+||+++||+|+|++..
T Consensus       171 ~~msa~EA~eyGliD~I~~~~  191 (196)
T PRK12551        171 FFMSPSEAVEYGLIDLVIDKR  191 (196)
T ss_pred             cCCCHHHHHHcCCCcEEeccC
Confidence            679999999999999998764

>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=97.66  E-value=0.00072  Score=60.82  Aligned_cols=135  Identities=11%  Similarity=0.076  Sum_probs=87.3

Q ss_pred             CCCHHHHHHHHHHHHHHHcCC---CceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcE
Q 018834           57 ALNTNMGAKLNKLFKAWENDP---NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPH  133 (350)
Q Consensus        57 al~~~m~~~L~~~l~~~~~d~---~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~  133 (350)
                      .+|..+.+.+...|..++..+   .+. |.|-+      .||++..-.                   .+...+...+-||
T Consensus        62 ~Idd~~a~~i~aqLl~L~~~~~~~~I~-lyINS------pGGsv~aGl-------------------aIyd~m~~~~~~V  115 (221)
T PRK14514         62 QIDDYTANTIQAQLLYLDSVDPGKDIS-IYINS------PGGSVYAGL-------------------GIYDTMQFISSDV  115 (221)
T ss_pred             EEcHHHHHHHHHHHHHHhccCCCCCEE-EEEEC------CCcchhhHH-------------------HHHHHHHhcCCCE
Confidence            478888888888777776432   333 33344      445443211                   1223355678899


Q ss_pred             EEEECCcccccccccccccCE--EEEeCCeeEecccccccccCCCchH----HHHhh-----------ccHH---HHHHH
Q 018834          134 VAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGAS----FYLSH-----------LPGH---LGEFL  193 (350)
Q Consensus       134 Ia~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s----~~L~r-----------l~g~---~a~~l  193 (350)
                      .+.+.|.|.+.|.-|.+++|.  |++.+++++-+-...-|......-.    .-+-+           ..|.   .-..+
T Consensus       116 ~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~~~  195 (221)
T PRK14514        116 ATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVWAD  195 (221)
T ss_pred             EEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence            999999999999999999996  9999999988777654432221100    01111           1121   12334


Q ss_pred             hhcCCCCCHHHHHHCCCCccccCC
Q 018834          194 ALTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       194 ~ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      +-....++|+||+++||||+|+..
T Consensus       196 ~~rd~wmtA~EA~eyGliD~Vi~~  219 (221)
T PRK14514        196 SDRDYWMTAQEAKEYGMIDEVLIK  219 (221)
T ss_pred             hhcCccCCHHHHHHcCCccEEeec
Confidence            555678999999999999999864

>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional

Probab=97.60  E-value=0.00098  Score=59.13  Aligned_cols=136  Identities=15%  Similarity=0.179  Sum_probs=90.2

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCce--EEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           57 ALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        57 al~~~m~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      .++.++...+...|..++.++.-+  .|.|-      |.|||+..-.                   .+...|...+-||.
T Consensus        35 ~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~IN------SpGG~v~~Gl-------------------aIyd~m~~~~~~V~   89 (201)
T PRK14513         35 PIESQMANTIVAQLLLLDSQNPEQEIQMYIN------CPGGEVYAGL-------------------AIYDTMRYIKAPVS   89 (201)
T ss_pred             EEcHHHHHHHHHHHHHhhccCCCCCEEEEEE------CCCCchhhHH-------------------HHHHHHHhcCCCEE
Confidence            478889999988888877643222  23333      4556654311                   13334556788999


Q ss_pred             EEECCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHHHHh------hccHHH-HHH-------------
Q 018834          135 AILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFYLS------HLPGHL-GEF-------------  192 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~~L~------rl~g~~-a~~-------------  192 (350)
                      ..+.|.|.+.|.-|.+++|-  |++.+++++-+.....|+.  +-++...-      +.-... ..|             
T Consensus        90 Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~I~~  167 (201)
T PRK14513         90 TICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEKLLR  167 (201)
T ss_pred             EEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence            99999999999999999995  9999999998877765541  11222111      110111 222             


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCC
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEK  219 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~  219 (350)
                      ++-....++|+||+++||||+|+++..
T Consensus       168 ~~~rd~~msa~EA~eyGliD~I~~~~~  194 (201)
T PRK14513        168 DMERDYFMSPEEAKAYGLIDSVIEPTR  194 (201)
T ss_pred             HhccCcccCHHHHHHcCCCcEEeccCC
Confidence            333456789999999999999997644

>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type

Probab=97.56  E-value=0.00096  Score=68.74  Aligned_cols=85  Identities=13%  Similarity=-0.058  Sum_probs=62.3

Q ss_pred             HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Q 018834           61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV  140 (350)
Q Consensus        61 ~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~  140 (350)
                      ..+.++.+.++.+..|+.|++|||.-.+   +.|+++..+.                .+++.+..+....|||||..+++
T Consensus        76 ~~l~~i~~~i~~A~~D~~IkgIvL~i~~---~~g~~~~~~~----------------ei~~ai~~fk~sgKpVvA~~~~~  136 (584)
T TIGR00705        76 ISLFDIVNAIRQAADDRRIEGLVFDLSN---FSGWDSPHLV----------------EIGSALSEFKDSGKPVYAYGTNY  136 (584)
T ss_pred             cCHHHHHHHHHHHhcCCCceEEEEEccC---CCCCCHHHHH----------------HHHHHHHHHHhcCCeEEEEEccc
Confidence            3567899999999999999999998652   2244433221                12223333445689999999887


Q ss_pred             ccccccccccccCEEEEeCCeeEec
Q 018834          141 TMGGGAGVSIPGTFRVACGKTVFAT  165 (350)
Q Consensus       141 ~~GgG~~Lal~~D~riate~a~f~~  165 (350)
                      + -||.-|+.+||-+++.+.+.++.
T Consensus       137 ~-s~~YylAs~AD~I~~~p~G~v~~  160 (584)
T TIGR00705       137 S-QGQYYLASFADEIILNPMGSVDL  160 (584)
T ss_pred             c-chhhhhhhhCCEEEECCCceEEe
Confidence            5 67899999999999999876644

E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.

>PRK07189 malonate decarboxylase subunit beta; Reviewed

Probab=97.50  E-value=0.0014  Score=61.51  Aligned_cols=150  Identities=14%  Similarity=0.131  Sum_probs=89.8

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCC----CceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDP----NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~----~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      |.++-.+..=..-++....-..+..+++.+..+.    -+-+|+|.-+|     |+.+.+-       . .....+ ...
T Consensus        70 v~v~a~D~tf~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSG-----GaRlqEg-------~-~~L~~~-a~i  135 (301)
T PRK07189         70 VVVAAQEGRFMGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFETG-----GVRLQEA-------N-AGLAAI-AEI  135 (301)
T ss_pred             EEEEEECCCccCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCC-----CcCccch-------H-HHHHHH-HHH
Confidence            4444455444677888888999999999887764    15566655433     3333221       0 001111 111


Q ss_pred             HHHHHHHhcCCCcEEEEECCc--ccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH--HH-HHHHh
Q 018834          120 YSFIYLLGTHLKPHVAILNGV--TMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--HL-GEFLA  194 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~--~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g--~~-a~~l~  194 (350)
                      +..+..+... .|+|+++-|.  |+||+..++..||++|+++++.+++.           +....-...|  .. ..+..
T Consensus       136 ~~~~~~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~igla-----------GP~VIe~~~G~e~~d~~d~~  203 (301)
T PRK07189        136 MRAIVDLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLS-----------GPEVIEQEAGVEEFDSRDRA  203 (301)
T ss_pred             HHHHHHHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEecc-----------CHHHHHHhcCCcccCHHHhc
Confidence            2222334444 9999999999  99999999999999999998766541           1111111122  11 33334


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEK  219 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~  219 (350)
                      +..+.+.+......|.+|.+++++.
T Consensus       204 ~vw~~lGG~h~~~sG~~D~~v~dd~  228 (301)
T PRK07189        204 LVWRTTGGKHRYLSGLADALVDDDV  228 (301)
T ss_pred             ccccccCcceeeecccceEEeCCHH
Confidence            4334444455667999999998764

>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily

Probab=97.49  E-value=0.00053  Score=62.84  Aligned_cols=94  Identities=15%  Similarity=0.181  Sum_probs=75.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      +-++.+....+.++++....+..+-.+ |      -+-||++..-                   +++...|.+++.|+++
T Consensus        70 ~~I~i~dse~v~raI~~~~~~~~IdLi-i------~TpGG~v~AA-------------------~~I~~~l~~~~~~v~v  123 (285)
T PF01972_consen   70 RYIDIDDSEFVLRAIREAPKDKPIDLI-I------HTPGGLVDAA-------------------EQIARALREHPAKVTV  123 (285)
T ss_pred             eeEcHhhHHHHHHHHHhcCCCCceEEE-E------ECCCCcHHHH-------------------HHHHHHHHhCCCCEEE
Confidence            568889999999999888777655444 4      3456665421                   2345557788999999


Q ss_pred             EECCcccccccccccccCEEEEeCCeeEecccccccccCC
Q 018834          136 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD  175 (350)
Q Consensus       136 ~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~  175 (350)
                      .|...|+.+|.-++++||-+++.+++.++--+..+|-+|.
T Consensus       124 ~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA  163 (285)
T PF01972_consen  124 IVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPA  163 (285)
T ss_pred             EECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCCh
Confidence            9999999999999999999999999999999999998774

The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane

>PRK05654 acetyl-CoA carboxylase subunit beta; Validated

Probab=97.41  E-value=0.005  Score=57.79  Aligned_cols=153  Identities=14%  Similarity=0.111  Sum_probs=94.8

Q ss_pred             EeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHH
Q 018834           40 GKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT  118 (350)
Q Consensus        40 ~~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~  118 (350)
                      .+|.-..|.-|.+. ...+++....+.+.++++.+... .+-+|.|.-+|     |+.+.+       +. ..... ...
T Consensus       118 I~G~~V~v~a~D~~f~gGS~g~~~~eKi~r~~e~A~~~-~lPlV~l~dsg-----GarmqE-------gi-~sL~~-~ak  182 (292)
T PRK05654        118 IEGMPVVLAVMDFSFMGGSMGSVVGEKIVRAVERAIEE-KCPLVIFSASG-----GARMQE-------GL-LSLMQ-MAK  182 (292)
T ss_pred             ECCEEEEEEEEecccccCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-----Ccchhh-------hh-hHHHh-HHH
Confidence            44554445555555 67889999999999999988776 57777776544     322211       11 11111 122


Q ss_pred             HHHHHHHHhcCCCcEEEEECCcccccccc-cccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhc
Q 018834          119 LYSFIYLLGTHLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALT  196 (350)
Q Consensus       119 ~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~-Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~lt  196 (350)
                      ....+.++.....|.|+++-|.|.||+.. .++.+|++|+.+++.+++--.               |.+... +..+  .
T Consensus       183 ~~~a~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGp---------------rvie~~~~e~l--p  245 (292)
T PRK05654        183 TSAALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGP---------------RVIEQTVREKL--P  245 (292)
T ss_pred             HHHHHHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCH---------------HHHHhhhhhhh--h
Confidence            22334445667899999999999999764 577799999988876554211               111111 1111  1


Q ss_pred             CCCCCHHHHHHCCCCccccCCCChHHHH
Q 018834          197 GAKLNGAEMMACGLATHYSVSEKLPLIE  224 (350)
Q Consensus       197 G~~l~a~eA~~~GLv~~vv~~~~l~~~~  224 (350)
                      -..-+++-+.+.|+||.|+++.++....
T Consensus       246 e~~~~ae~~~~~G~vD~Vv~~~e~r~~l  273 (292)
T PRK05654        246 EGFQRAEFLLEHGAIDMIVHRRELRDTL  273 (292)
T ss_pred             hhhcCHHHHHhCCCCcEEECHHHHHHHH
Confidence            1112455567899999999998876543

>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification

Probab=97.23  E-value=0.00037  Score=59.28  Aligned_cols=99  Identities=17%  Similarity=0.101  Sum_probs=60.9

Q ss_pred             hcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccc------------cccc---------cCCCc-----hH-
Q 018834          127 GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGF---------HPDAG-----AS-  179 (350)
Q Consensus       127 ~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~------------~iGl---------~P~~G-----~s-  179 (350)
                      ....|||||.++|.+..+|.-|+.+||-+++++.+.++..-+            ++|+         +.+.+     .+ 
T Consensus         3 ~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s~   82 (154)
T PF01343_consen    3 KASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMSE   82 (154)
T ss_dssp             HHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--H
T ss_pred             cccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCCH
Confidence            357899999999999999999999999999999886665322            1232         22222     00 


Q ss_pred             ---HHHhhccH-----------------HHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHH
Q 018834          180 ---FYLSHLPG-----------------HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELG  228 (350)
Q Consensus       180 ---~~L~rl~g-----------------~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~  228 (350)
                         ..+.+++.                 .....-++.|..++|++|++.||||.+-.   ++++.+.+.
T Consensus        83 ~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~~~~A~~~GLiD~i~~---~~~~~~~l~  148 (154)
T PF01343_consen   83 EERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFTAQQALELGLIDEIGT---FDEAIARLA  148 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEEHHHHHHTTSSSEETS---HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhccccHHHHHHcCchhhcCC---HHHHHHHHH
Confidence               11111111                 01112357899999999999999999954   455555544

; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.

>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=97.19  E-value=0.003  Score=55.61  Aligned_cols=141  Identities=15%  Similarity=0.065  Sum_probs=85.3

Q ss_pred             EEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceE--EEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           47 AILNRPSALNALNTNMGAKLNKLFKAWENDPNIGF--VSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        47 ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~--vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      |.|..|     ++..+...+...+..++.++..+-  +.|-+.|+...+|.                         .+..
T Consensus        30 I~l~g~-----I~~~~a~~i~aqll~Lea~~~~k~I~lyINSpGG~V~aG~-------------------------AIyd   79 (200)
T COG0740          30 IFLGGE-----IEDHMANLIVAQLLFLEAEDPDKDIYLYINSPGGSVTAGL-------------------------AIYD   79 (200)
T ss_pred             EEEeee-----echHHHHHHHHHHHHHHhcCCCCCeEEEEeCCCcccchhH-------------------------HHHH
Confidence            555544     444566666666666665544443  34444444444431                         1223


Q ss_pred             HHhcCCCcEEEEECCcccccccccccccCEE--EEeCCeeEecccccccccCCCchHHHHh--h----c-----------
Q 018834          125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFR--VACGKTVFATPETLIGFHPDAGASFYLS--H----L-----------  185 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~r--iate~a~f~~Pe~~iGl~P~~G~s~~L~--r----l-----------  185 (350)
                      .+...++||...+.|.+..-|.-|+++++..  ++.+++++-+.... |.+-+. ++-+.-  +    +           
T Consensus        80 tm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~-a~Di~i~A~ei~~~~~~l~~i~a~~  157 (200)
T COG0740          80 TMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQ-ASDIEIHAREILKIKERLNRIYAEH  157 (200)
T ss_pred             HHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccC-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3556799999999999999999999998875  88888877665554 322221 111110  0    0           


Q ss_pred             cHHH---HHHHhhcCCCCCHHHHHHCCCCccccCCCC
Q 018834          186 PGHL---GEFLALTGAKLNGAEMMACGLATHYSVSEK  219 (350)
Q Consensus       186 ~g~~---a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~  219 (350)
                      .|..   -....=....++|+||+++||+|+|+...+
T Consensus       158 TGq~~e~i~~d~drd~~msa~eA~~yGLiD~V~~~~~  194 (200)
T COG0740         158 TGQTLEKIEKDTDRDTWMSAEEAKEYGLIDKVIESRE  194 (200)
T ss_pred             cCCCHHHHHHhhcccccCCHHHHHHcCCcceeccccc
Confidence            0100   122333466789999999999999987654

>PRK12552 ATP-dependent Clp protease-like protein; Reviewed

Probab=97.12  E-value=0.0082  Score=53.98  Aligned_cols=140  Identities=17%  Similarity=0.141  Sum_probs=89.4

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCce--EEEEEcCCCccccC---CChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCC
Q 018834           57 ALNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAG---GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK  131 (350)
Q Consensus        57 al~~~m~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG---~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~k  131 (350)
                      .++.++.+.+...|-.++.++..+  -+.|-|.|....+|   +++.+                   ...+...+...+-
T Consensus        48 ~~~~~~a~~iiaqLl~L~~~~~~k~I~lyINSpGGsv~~G~~iG~v~~-------------------glaIyD~m~~ik~  108 (222)
T PRK12552         48 QVGMDVTELIIAQLLYLEFDDPEKPIYFYINSTGTSWYTGDAIGFETE-------------------AFAICDTMRYIKP  108 (222)
T ss_pred             chhHhHHHHHHHHHHHHhccCCCCCEEEEEeCCCCCcccccccccccc-------------------HHHHHHHHHhcCC
Confidence            445568889888888876644322  35556666555555   22211                   1112233445677


Q ss_pred             cEEEEECCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHHH------HhhccHHH-HHHHhhcC-----
Q 018834          132 PHVAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASFY------LSHLPGHL-GEFLALTG-----  197 (350)
Q Consensus       132 P~Ia~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~~------L~rl~g~~-a~~l~ltG-----  197 (350)
                      ||...+.|.|.+.|.-|.+++|-  |++.+++++-+.....|..  +-++-+      |-++-... ..|.--||     
T Consensus       109 ~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~--G~A~di~~~a~el~~~r~~l~~iya~~TG~~~e~  186 (222)
T PRK12552        109 PVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR--GQATDIQIRAKEVLHNKRTMLEILSRNTGQTVEK  186 (222)
T ss_pred             CeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc--cCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Confidence            89999999999999999999985  9999999988877655542  112211      11111111 22333344     


Q ss_pred             --------CCCCHHHHHHCCCCccccCC
Q 018834          198 --------AKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       198 --------~~l~a~eA~~~GLv~~vv~~  217 (350)
                              ..++|+||+++||||+|+.+
T Consensus       187 I~~d~~rd~wmsA~EA~eyGliD~Ii~~  214 (222)
T PRK12552        187 LSKDTDRMFYLTPQEAKEYGLIDRVLES  214 (222)
T ss_pred             HHHHhcCCCcCCHHHHHHcCCCcEEecc
Confidence                    56899999999999999865

>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit

Probab=97.11  E-value=0.017  Score=53.98  Aligned_cols=154  Identities=12%  Similarity=0.095  Sum_probs=93.4

Q ss_pred             EeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHH
Q 018834           40 GKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT  118 (350)
Q Consensus        40 ~~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~  118 (350)
                      .+|.-..|.-|.+. ..-+++....+.+.++++.+... .+-+|.+..+|++     -+.       ++. .....+ ..
T Consensus       117 I~G~~V~v~a~D~~f~gGSmg~~~geKi~r~~e~A~~~-~lPlV~l~dSgGa-----Rmq-------Eg~-~sL~~~-ak  181 (285)
T TIGR00515       117 LYGMPIVVAVFDFAFMGGSMGSVVGEKFVRAIEKALED-NCPLIIFSASGGA-----RMQ-------EAL-LSLMQM-AK  181 (285)
T ss_pred             ECCEEEEEEEEeccccCCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCc-----ccc-------cch-hHHHhH-HH
Confidence            34443334444444 66889999999999999988765 5777777655433     121       111 111111 22


Q ss_pred             HHHHHHHHhcCCCcEEEEECCcccccccc-cccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcC
Q 018834          119 LYSFIYLLGTHLKPHVAILNGVTMGGGAG-VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTG  197 (350)
Q Consensus       119 ~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~-Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG  197 (350)
                      ....+.++.....|+|+++-|.|.||+.. .++.+|++|+.+++.+++--.+           .+....   +..  +.-
T Consensus       182 ~~~~~~~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti---~e~--lpe  245 (285)
T TIGR00515       182 TSAALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTV---REK--LPE  245 (285)
T ss_pred             HHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHh---cCc--cch
Confidence            22234445667899999999999999765 5579999999998866652221           111111   111  111


Q ss_pred             CCCCHHHHHHCCCCccccCCCChHHHH
Q 018834          198 AKLNGAEMMACGLATHYSVSEKLPLIE  224 (350)
Q Consensus       198 ~~l~a~eA~~~GLv~~vv~~~~l~~~~  224 (350)
                      .--+++-+.+.|+||.+|++.++....
T Consensus       246 ~~q~ae~~~~~G~vD~iv~~~~~r~~l  272 (285)
T TIGR00515       246 GFQTSEFLLEHGAIDMIVHRPEMKKTL  272 (285)
T ss_pred             hcCCHHHHHhCCCCcEEECcHHHHHHH
Confidence            112445577889999999998876543

The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.

>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit

Probab=97.04  E-value=0.026  Score=57.24  Aligned_cols=159  Identities=17%  Similarity=0.146  Sum_probs=98.4

Q ss_pred             CCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834           42 ANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY  120 (350)
Q Consensus        42 ~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      |....|.=|+|. ...+++.+..+...+.++.+... ++-+|.|.-.+. |..|-+-             +....++..-
T Consensus       314 G~~V~vvAnd~~~~~G~~~~~~~~K~~r~i~~a~~~-~lPlV~lvDs~G-~~~g~~~-------------E~~g~~~~~a  378 (512)
T TIGR01117       314 GQSVGIIANQPKVMAGCLDIDSSDKIARFIRFCDAF-NIPIVTFVDVPG-FLPGVNQ-------------EYGGIIRHGA  378 (512)
T ss_pred             CEEEEEEEeccccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCcC-ccccHHH-------------HHHHHHHHHH
Confidence            333344445554 34569999999999999988764 566666654433 5444321             1122344555


Q ss_pred             HHHHHHhcCCCcEEEEECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhhc-c----H-HHH
Q 018834          121 SFIYLLGTHLKPHVAILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P----G-HLG  190 (350)
Q Consensus       121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-~----g-~~a  190 (350)
                      +++..+.....|.|++|-|.+.|||..-.    +.+|++++.+++.++       +.+.-++...+.+- .    . ..+
T Consensus       379 ~~~~a~~~~~vP~isvi~g~~~Gga~~am~~~~~~~d~~~a~p~a~~~-------v~~pe~a~~i~~~~~l~~~~~~~~~  451 (512)
T TIGR01117       379 KVLYAYSEATVPKVTIITRKAYGGAYLAMCSKHLGADQVYAWPTAEIA-------VMGPAGAANIIFRKDIKEAKDPAAT  451 (512)
T ss_pred             HHHHHHHhCCCCEEEEEcCCCchHHHHHhccccCCCCEEEEcCCCeEe-------ecCHHHHHHHHhhhhcccccCHHHH
Confidence            67788888999999999999988865322    238888888776554       44333333333221 0    0 001


Q ss_pred             --HHH-hhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          191 --EFL-ALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       191 --~~l-~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                        ..+ -..-+..++..+...|+||.|+++.+...
T Consensus       452 ~~~~~~~~~~~~~~~~~~a~~g~vD~VI~P~~tR~  486 (512)
T TIGR01117       452 RKQKIAEYREEFANPYKAAARGYVDDVIEPKQTRP  486 (512)
T ss_pred             HHHHHHHHHHhhcCHHHHHhcCCCCeeEChHHHHH
Confidence              000 11122447888999999999999988764

This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.

>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed

Probab=96.90  E-value=0.038  Score=51.71  Aligned_cols=148  Identities=16%  Similarity=0.191  Sum_probs=88.1

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834           44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI  123 (350)
Q Consensus        44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (350)
                      |.++-.+-.=..-++....-+.+.++++.+... .+-+|++..+|     |+.+.+       +. .....+.+. ...+
T Consensus       135 v~v~a~Dftf~gGSmG~v~geKi~ra~e~A~~~-rlPlV~l~~SG-----GARmQE-------g~-~sL~qmak~-saa~  199 (296)
T CHL00174        135 VALGVMDFQFMGGSMGSVVGEKITRLIEYATNE-SLPLIIVCASG-----GARMQE-------GS-LSLMQMAKI-SSAL  199 (296)
T ss_pred             EEEEEECCcccccCcCHHHHHHHHHHHHHHHHc-CCCEEEEECCC-----Cccccc-------cc-hhhhhhHHH-HHHH
Confidence            344444433366788888999999999888765 46677776543     333322       11 011111111 0111


Q ss_pred             HH-HhcCCCcEEEEECCccccccccc-ccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCC-
Q 018834          124 YL-LGTHLKPHVAILNGVTMGGGAGV-SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKL-  200 (350)
Q Consensus       124 ~~-i~~~~kP~Ia~i~G~~~GgG~~L-al~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l-  200 (350)
                      .. ...-..|+|+++.|+|.||+... ++.||++|+.+++.+++.-               ||++-.      .+|+.+ 
T Consensus       200 ~~~~~~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAG---------------PrVIe~------t~ge~lp  258 (296)
T CHL00174        200 YDYQSNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAG---------------KRVIEQ------TLNKTVP  258 (296)
T ss_pred             HHHHHcCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeC---------------HHHHHH------hcCCcCC
Confidence            12 22456999999999999998765 6679999997777554321               111111      222222 


Q ss_pred             ----CHHHHHHCCCCccccCCCChHHHHHHH
Q 018834          201 ----NGAEMMACGLATHYSVSEKLPLIEEEL  227 (350)
Q Consensus       201 ----~a~eA~~~GLv~~vv~~~~l~~~~~~l  227 (350)
                          +++-.++.|+||.+|+..++.+....+
T Consensus       259 e~fq~ae~l~~~G~vD~iV~r~~lr~~l~~l  289 (296)
T CHL00174        259 EGSQAAEYLFDKGLFDLIVPRNLLKGVLSEL  289 (296)
T ss_pred             cccccHHHHHhCcCceEEEcHHHHHHHHHHH
Confidence                355577899999999987776544433

>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]

Probab=96.84  E-value=0.023  Score=57.55  Aligned_cols=138  Identities=14%  Similarity=0.213  Sum_probs=90.8

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCC--ChhhHHHhhhcCChHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG--DIVSLYHFMNQGKLEECKDFFRTLYSF  122 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~--Dl~~~~~~~~~~~~~~~~~~~~~~~~l  122 (350)
                      .++-.+.--...+++......+.++++.+..+ .+-+|.|.-     |+|+  ++.+-..        ....+ .....-
T Consensus        60 ~v~a~D~t~~gGs~g~~~~~Ki~ra~~~A~~~-~~P~v~l~d-----sgGa~~r~~eg~~--------~l~~~-g~i~~~  124 (493)
T PF01039_consen   60 VVIAQDFTVLGGSVGEVHGEKIARAIELALEN-GLPLVYLVD-----SGGAFLRMQEGVE--------SLMGM-GRIFRA  124 (493)
T ss_dssp             EEEEEETTSGGGTBSHHHHHHHHHHHHHHHHH-TEEEEEEEE-----ESSBCGGGGGHHH--------HHHHH-HHHHHH
T ss_pred             EEEEeccceecCCCCcccceeeehHHHHHHHc-CCCcEEecc-----ccccccccchhhh--------hhhhh-HHHHHH
Confidence            33344444467889999999999999998876 455665543     4455  4433221        11112 122223


Q ss_pred             HHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCC
Q 018834          123 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLN  201 (350)
Q Consensus       123 ~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~  201 (350)
                      ...+.. ..|+|+++.|.|.|||..++..||++|++++ +.+.       +   .|     |++     .. ..+|+.++
T Consensus       125 ~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~-------l---~G-----P~v-----v~-~~~Ge~~~  182 (493)
T PF01039_consen  125 IARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIF-------L---AG-----PRV-----VE-SATGEEVD  182 (493)
T ss_dssp             HHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEE-------S---ST-----HHH-----HH-HHHSSCTS
T ss_pred             HHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEE-------e---cc-----ccc-----cc-cccCcccc
Confidence            344555 9999999999999999999999999999987 6554       3   11     111     11 35678888


Q ss_pred             HHHH-------HHCCCCccccCCCC
Q 018834          202 GAEM-------MACGLATHYSVSEK  219 (350)
Q Consensus       202 a~eA-------~~~GLv~~vv~~~~  219 (350)
                      .++.       ...|.+|.++++++
T Consensus       183 ~~~lgG~~~h~~~sG~~d~v~~de~  207 (493)
T PF01039_consen  183 SEELGGADVHAAKSGVVDYVVDDEE  207 (493)
T ss_dssp             HHHHHBHHHHHHTSSSSSEEESSHH
T ss_pred             chhhhhhhhhcccCCCceEEEechH
Confidence            7764       46899999998764

The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....

>PRK10949 protease 4; Provisional

Probab=96.76  E-value=0.0093  Score=61.75  Aligned_cols=85  Identities=15%  Similarity=0.045  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Q 018834           61 NMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV  140 (350)
Q Consensus        61 ~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~  140 (350)
                      -.+.++.++++.+..||.|++|||.-.+-   .|..+..+                +.+++.+..+....|||||..+.+
T Consensus        95 ~~l~div~~i~~Aa~D~rIkgivL~i~s~---gG~~~a~~----------------~eI~~ai~~fk~sGKpVvA~~~~~  155 (618)
T PRK10949         95 NSLFDIVNTIRQAKDDRNITGIVLDLKNF---AGADQPSM----------------QYIGKALREFRDSGKPVYAVGDSY  155 (618)
T ss_pred             ccHHHHHHHHHHHhcCCCceEEEEEeCCC---CCccHHHH----------------HHHHHHHHHHHHhCCeEEEEecCc
Confidence            34568999999999999999999987531   12222111                112223333445689999975555


Q ss_pred             ccccccccccccCEEEEeCCeeEec
Q 018834          141 TMGGGAGVSIPGTFRVACGKTVFAT  165 (350)
Q Consensus       141 ~~GgG~~Lal~~D~riate~a~f~~  165 (350)
                      + -++.-|+.+||-+++.+.+.++.
T Consensus       156 ~-s~~YyLASaAD~I~l~P~G~v~~  179 (618)
T PRK10949        156 S-QGQYYLASFANKIYLSPQGVVDL  179 (618)
T ss_pred             c-chhhhhhhhCCEEEECCCceEEE
Confidence            4 56889999999999999776653

>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain

Probab=96.22  E-value=0.11  Score=53.24  Aligned_cols=146  Identities=17%  Similarity=0.187  Sum_probs=88.1

Q ss_pred             eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +|.-..|.-|.+. +..+++....+.+.++++.+.+. .+-+|.|.-+|.++-.+ ....+         .....+ ...
T Consensus       127 ~Gr~V~v~a~D~tv~GGs~g~~~~~Ki~r~~elA~~~-~lPlV~l~DSgGarl~~-q~e~~---------~~~~~~-g~i  194 (569)
T PLN02820        127 HGRLCMFVANDPTVKGGTYYPITVKKHLRAQEIAAQC-RLPCIYLVDSGGANLPR-QAEVF---------PDRDHF-GRI  194 (569)
T ss_pred             CCEEEEEEEECCCccCCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCcCCcc-ccccc---------chHhHH-HHH
Confidence            3443334444444 67889999999999999988775 46666665443332111 00001         000111 111


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHHHHHHhhcCC
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA  198 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~  198 (350)
                      +.....+.....|+|+++-|.|.|||..+...||++|+++. +.+.       +   .|     |+++.      ..||+
T Consensus       195 f~~~~~ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~-------~---aG-----P~vV~------~~~Ge  253 (569)
T PLN02820        195 FYNQARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIF-------L---AG-----PPLVK------AATGE  253 (569)
T ss_pred             HHHHHHHhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEE-------e---cC-----HHHHH------hhcCc
Confidence            22223355667999999999999999999999999999874 4333       2   11     11111      25566


Q ss_pred             CCCHHHH-----H--HCCCCccccCCCC
Q 018834          199 KLNGAEM-----M--ACGLATHYSVSEK  219 (350)
Q Consensus       199 ~l~a~eA-----~--~~GLv~~vv~~~~  219 (350)
                      .++++|.     .  ..|.+|.++++|.
T Consensus       254 ~v~~eeLGGa~~h~~~sGv~d~~~~de~  281 (569)
T PLN02820        254 EVSAEDLGGADVHCKVSGVSDHFAQDEL  281 (569)
T ss_pred             ccCHHHhCCHHHhcccccccccccCchH
Confidence            6666665     2  4799988887764

>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]

Probab=96.15  E-value=0.12  Score=50.78  Aligned_cols=148  Identities=10%  Similarity=0.151  Sum_probs=103.3

Q ss_pred             eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834           41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY  120 (350)
Q Consensus        41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      ++.|.+|.++     +.+++.+.+.+.+.++.++++. ..+|||.=+                 ..+.      +.....
T Consensus        25 ~~~v~vi~i~-----g~I~~~s~~~l~r~l~~A~~~~-a~~vvl~ld-----------------TPGG------l~~sm~   75 (436)
T COG1030          25 EKKVYVIEID-----GAIDPASADYLQRALQSAEEEN-AAAVVLELD-----------------TPGG------LLDSMR   75 (436)
T ss_pred             CCeEEEEEec-----CccCHHHHHHHHHHHHHHHhCC-CcEEEEEec-----------------CCCc------hHHHHH
Confidence            4567888885     5699999999999999998865 334444311                 0111      123345


Q ss_pred             HHHHHHhcCCCcEEEEEC---CcccccccccccccCEEEEeCCeeEecccccccc--cCC-Cc-hHHHHhhcc------H
Q 018834          121 SFIYLLGTHLKPHVAILN---GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGF--HPD-AG-ASFYLSHLP------G  187 (350)
Q Consensus       121 ~l~~~i~~~~kP~Ia~i~---G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl--~P~-~G-~s~~L~rl~------g  187 (350)
                      ++...|.+.+.||+..+.   +.|...|.-++++||+..+.+.+.++--..-.+-  .++ .. .++.+..+.      |
T Consensus        76 ~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~~g  155 (436)
T COG1030          76 QIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEERG  155 (436)
T ss_pred             HHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHHcC
Confidence            678889999999888884   4799999999999999999998887754432222  111 11 223333222      2


Q ss_pred             ---HHHHHHhhcCCCCCHHHHHHCCCCccccCC
Q 018834          188 ---HLGEFLALTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       188 ---~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                         ..+..++.....++++||++.|++|-+..+
T Consensus       156 RN~~~ae~~v~~~~~l~a~eA~~~~vid~iA~~  188 (436)
T COG1030         156 RNPTWAERFVTENLSLTAEEALRQGVIDLIARD  188 (436)
T ss_pred             CChHHHHHHhhhccCCChhHHHhcCccccccCC
Confidence               226788899999999999999999987643

>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit

Probab=96.13  E-value=0.11  Score=52.91  Aligned_cols=142  Identities=16%  Similarity=0.228  Sum_probs=83.7

Q ss_pred             eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +|.-..|.-+... ..-+++....+.+.++++.+.++. +-+|.|.-+|     |+.+.+=.        .....+-+..
T Consensus        80 ~Gr~v~v~a~D~t~~gGS~g~~~~~K~~r~~e~A~~~~-lPlV~l~dSg-----Garm~eg~--------~~l~~~~~~~  145 (512)
T TIGR01117        80 DGRLVYAFAQDFTVMGGSLGEMHAAKIVKIMDLAMKMG-APVVGLNDSG-----GARIQEAV--------DALKGYGDIF  145 (512)
T ss_pred             CCEEEEEEEECCcccccCCCHHHHHHHHHHHHHHHHcC-CCEEEEecCC-----CCCccccc--------hhhhhHHHHH
Confidence            3433334444433 567888889999999999887764 5566555432     33332100        0001111111


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCe-eEecccccccccCCCchHHHHhhccHHHHHHHhhcCC
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT-VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA  198 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a-~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~  198 (350)
                      +.. .. ..-..|+|+++.|.|.||+......||++|+++++ .+.       +   .|     |+++.      ..||+
T Consensus       146 ~~~-~~-~s~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~-------~---aG-----P~vv~------~~~Ge  202 (512)
T TIGR01117       146 YRN-TI-ASGVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMF-------I---TG-----PQVIK------TVTGE  202 (512)
T ss_pred             HHH-HH-HcCCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEE-------e---cC-----hHHHH------hhcCc
Confidence            111 11 23358999999999999998887799999999864 233       2   11     11111      14566


Q ss_pred             CCCHHHH-------HHCCCCccccCCCC
Q 018834          199 KLNGAEM-------MACGLATHYSVSEK  219 (350)
Q Consensus       199 ~l~a~eA-------~~~GLv~~vv~~~~  219 (350)
                      .++++|.       ...|.+|.+++++.
T Consensus       203 ~v~~e~lGGa~~h~~~sGv~d~~~~de~  230 (512)
T TIGR01117       203 EVTAEQLGGAMAHNSVSGVAHFIAEDDD  230 (512)
T ss_pred             ccchhhcchHHHhccccceeEEecCChH
Confidence            6666555       25899999987754

This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.

>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]

Probab=96.12  E-value=0.054  Score=54.43  Aligned_cols=196  Identities=13%  Similarity=0.112  Sum_probs=107.9

Q ss_pred             EEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHh
Q 018834           48 ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLG  127 (350)
Q Consensus        48 tLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~  127 (350)
                      -=+.+.+.-++..-....+.++.+.+..+-.-.+.+..|.      |+.+.+=.        ..... +...+.-+.+++
T Consensus        97 a~D~TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l~dsg------Gari~~~v--------~~l~g-~g~iF~~~a~~S  161 (526)
T COG4799          97 ANDFTVKGGTLGEMTAKKILRAQELAIENGLPVIGLNDSG------GARIQEGV--------PSLAG-YGRIFYRNARAS  161 (526)
T ss_pred             EecCceecccccccccchHHHHHHHHHHcCCCEEEEEccc------ccccccCc--------ccccc-chHHHHHHHHhc
Confidence            3345557788888888888888888877644444454443      33332211        01111 122222234455


Q ss_pred             cCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHHHH--
Q 018834          128 THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEM--  205 (350)
Q Consensus       128 ~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~eA--  205 (350)
                      .. .|.|++|-|.|.|||+-+...||+.|+.+++      ..+.+             .|..... ..||+.++++|.  
T Consensus       162 g~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~------~~mfl-------------tGP~~ik-~vtGe~V~~e~LGG  220 (526)
T COG4799         162 GV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ------SYMFL-------------TGPPVIK-AVTGEEVSAEELGG  220 (526)
T ss_pred             cC-CCEEEEEEecCcccccccccccceEEEEcCC------ccEEe-------------eCHHHHH-hhcCcEeehhhccc
Confidence            55 9999999999999999999999999999985      11112             1111111 256666666653  


Q ss_pred             -----HHCCCCccccCCCC--hHHHHHHHHHhccCCH---HH------HHHHHHHHhccCCCCcchHHHHHHHHHHhcCc
Q 018834          206 -----MACGLATHYSVSEK--LPLIEEELGKLVTDDP---SV------IEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL  269 (350)
Q Consensus       206 -----~~~GLv~~vv~~~~--l~~~~~~l~~l~~~~~---~~------i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~  269 (350)
                           ...|.+|++.++|.  ++.+.+.+.-+.+...   ..      ...--+.+............+.++.|.+.|+.
T Consensus       221 a~vh~~~sGva~~~a~dd~~Ai~~vr~~lsylp~~~~~~~p~~~~~~~~~~~~~~l~~ivP~d~~~pYDvrevI~rl~D~  300 (526)
T COG4799         221 AQVHARKSGVADLLAEDDEDAIELVRRLLSYLPSNNREPPPVVPTPDEPDRDDEELDSIVPDDPRKPYDVREVIARLVDD  300 (526)
T ss_pred             hhhhcccccceeeeecCHHHHHHHHHHHHHhcCccCCCCCCcCCCCCCcccChhhhcccCCCCCCccccHHHHHHHhcCC
Confidence                 24588888776653  2222233333332211   10      00001111111222223334558889999986


Q ss_pred             CCHHHHHHHH
Q 018834          270 DTVEEIIDSL  279 (350)
Q Consensus       270 ~~~~ei~~~l  279 (350)
                      .++.|+.+..
T Consensus       301 ~~F~E~~~~~  310 (526)
T COG4799         301 GEFLEFKAGY  310 (526)
T ss_pred             ccHHHHHhhh
Confidence            6777766544

>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]

Probab=95.05  E-value=0.27  Score=49.86  Aligned_cols=156  Identities=16%  Similarity=0.173  Sum_probs=94.0

Q ss_pred             CCEEEEEEcCCCCCC-CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834           42 ANSRMAILNRPSALN-ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY  120 (350)
Q Consensus        42 ~~v~~ItLnrp~~~N-al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      |...-|.=|+|.... +++.+-.....+.++.++. .++-+|.|.-. ..|..|-+             .+.....+..-
T Consensus       293 G~pVGiian~~~~~~G~~~~~~a~K~arfi~lcd~-~~iPlv~l~dt-pGf~~g~~-------------~E~~g~~~~ga  357 (493)
T PF01039_consen  293 GRPVGIIANNPRQRAGALDPDGARKAARFIRLCDA-FNIPLVTLVDT-PGFMPGPE-------------AERAGIIRAGA  357 (493)
T ss_dssp             TEEEEEEEE-TTCGGGEB-HHHHHHHHHHHHHHHH-TT--EEEEEEE-CEB--SHH-------------HHHTTHHHHHH
T ss_pred             CcceEEEEeccccccccCChHHHHHHHHHHHHHHh-hCCceEEEeec-ccccccch-------------hhhcchHHHHH
Confidence            333445556765322 6999999999999999887 47788877643 44555421             12223455666


Q ss_pred             HHHHHHhcCCCcEEEEECCcccccccccccc----cCEEEEeCCeeEecccccccccCCCchHHHHhhccH---------
Q 018834          121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSIP----GTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG---------  187 (350)
Q Consensus       121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~----~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g---------  187 (350)
                      ++++++.++..|.|.++=|.+.|||......    .|+++|.+++.++       ..+.-|+...+.+.--         
T Consensus       358 ~~~~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~~~-------vm~~e~a~~i~~~~~~~~~~~~~~~  430 (493)
T PF01039_consen  358 RLLYALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAEIG-------VMGPEGAASILYRDELEAAEAEGAD  430 (493)
T ss_dssp             HHHHHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-EEE-------SS-HHHHHHHHTHHHHHHSCHCCHS
T ss_pred             HHHHHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcceee-------ecChhhhheeeehhhhhhhhcccch
Confidence            7888899999999999999999987643333    3677666666554       5544444443332110         


Q ss_pred             -------HHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          188 -------HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       188 -------~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                             ....+.-   ..-++..+...|++|.++++.+...
T Consensus       431 ~~~~~~~~~~~~~~---~~~~~~~~a~~~~~D~ii~p~~tR~  469 (493)
T PF01039_consen  431 PEAQRAEKIAEYED---ELSSPYRAASRGYVDDIIDPAETRK  469 (493)
T ss_dssp             HHHHHHHHHHHHHH---HHSSHHHHHHTTSSSEESSGGGHHH
T ss_pred             hHHHHHHHHHHHHH---hcCCHHHHHhcCCCCCccCHHHHHH
Confidence                   0011111   1147888999999999999887764

The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....

>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]

Probab=94.89  E-value=0.027  Score=52.07  Aligned_cols=86  Identities=13%  Similarity=0.132  Sum_probs=59.0

Q ss_pred             HHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCH
Q 018834          123 IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNG  202 (350)
Q Consensus       123 ~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a  202 (350)
                      ...+...+.|+||.|=|---+||.-=...+|.+.+-++++|+.      +.|.+ .+-.|-+=... +.. +-.-..|+|
T Consensus       181 L~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG-~AsILWkD~~k-a~e-AAe~mkita  251 (317)
T COG0825         181 LREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEG-CASILWKDASK-AKE-AAEAMKITA  251 (317)
T ss_pred             HHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhh-hhhhhhcChhh-hHH-HHHHcCCCH
Confidence            3446789999999999876555543333479999999999883      34544 44444442222 222 233457899


Q ss_pred             HHHHHCCCCccccCC
Q 018834          203 AEMMACGLATHYSVS  217 (350)
Q Consensus       203 ~eA~~~GLv~~vv~~  217 (350)
                      .+++++|+||.|+|.
T Consensus       252 ~dLk~lgiID~II~E  266 (317)
T COG0825         252 HDLKELGIIDGIIPE  266 (317)
T ss_pred             HHHHhCCCcceeccC
Confidence            999999999999986

>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]

Probab=94.13  E-value=1.1  Score=41.29  Aligned_cols=142  Identities=15%  Similarity=0.200  Sum_probs=86.8

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834           44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI  123 (350)
Q Consensus        44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (350)
                      ++...++-.=-..++..-.=..|.++++.+-.+ ++.+|+++.+|     |.-+.+-       . -...+. ....-.+
T Consensus       124 vv~av~df~FmgGSmGsVvGeki~ra~E~A~e~-k~P~v~f~aSG-----GARMQEg-------~-lSLMQM-aktsaAl  188 (294)
T COG0777         124 VVLAVMDFAFMGGSMGSVVGEKITRAIERAIED-KLPLVLFSASG-----GARMQEG-------I-LSLMQM-AKTSAAL  188 (294)
T ss_pred             EEEEEEeccccccchhHHHHHHHHHHHHHHHHh-CCCEEEEecCc-----chhHhHH-------H-HHHHHH-HHHHHHH
Confidence            344444432234566666677788888887665 57888877654     3222220       0 011111 1223344


Q ss_pred             HHHhcCCCcEEEEECCcccccc-cccccccCEEEEeCCeeEeccccc-----ccc-cCCCchHHHHhhccHHHHHHHhhc
Q 018834          124 YLLGTHLKPHVAILNGVTMGGG-AGVSIPGTFRVACGKTVFATPETL-----IGF-HPDAGASFYLSHLPGHLGEFLALT  196 (350)
Q Consensus       124 ~~i~~~~kP~Ia~i~G~~~GgG-~~Lal~~D~riate~a~f~~Pe~~-----iGl-~P~~G~s~~L~rl~g~~a~~l~lt  196 (350)
                      .++.....|+|+.+..+++||= +.+++..|+.||-+++.+++.-.+     +|- .|+           |.+       
T Consensus       189 ~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGpRVIEQTire~LPe-----------gfQ-------  250 (294)
T COG0777         189 KRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGPRVIEQTIREKLPE-----------GFQ-------  250 (294)
T ss_pred             HHHHhcCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcchhhhhhhcccCCc-----------chh-------
Confidence            5567789999999999999984 478889999998866655442211     221 121           111       


Q ss_pred             CCCCCHHHHHHCCCCccccCCCChHH
Q 018834          197 GAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       197 G~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                          +++-.++.|+||.||+..++..
T Consensus       251 ----~aEfLlehG~iD~iv~R~elr~  272 (294)
T COG0777         251 ----TAEFLLEHGMIDMIVHRDELRT  272 (294)
T ss_pred             ----hHHHHHHcCCceeeecHHHHHH
Confidence                4555789999999999877654

>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain

Probab=93.00  E-value=3.4  Score=42.56  Aligned_cols=144  Identities=13%  Similarity=0.063  Sum_probs=92.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      -+++.+-.+...+.++.++. -++-+|.|.-. ..|-.|-+-.             .....+...++++++.....|.|+
T Consensus       380 g~l~~~~a~Kaarfi~lc~~-~~iPlv~l~D~-pGf~~G~~~E-------------~~G~~~~~a~l~~A~a~~~VP~is  444 (569)
T PLN02820        380 GILFTESALKGAHFIELCAQ-RGIPLLFLQNI-TGFMVGSRSE-------------ASGIAKAGAKMVMAVACAKVPKIT  444 (569)
T ss_pred             CccCHHHHHHHHHHHHHHHh-cCCCEEEEEEC-CCCCCCHHHH-------------HhhHHHHHHHHHHHHHhCCCCEEE
Confidence            45888888988888888876 46777766543 2355553221             123456677888889999999999


Q ss_pred             EECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhhc-c------------HHH-HHH---Hh
Q 018834          136 ILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P------------GHL-GEF---LA  194 (350)
Q Consensus       136 ~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-~------------g~~-a~~---l~  194 (350)
                      +|=|.+.|||..-.    +..|++++.+++       .+|..+.-|+.-.+.+. .            -.. +..   .-
T Consensus       445 vi~g~a~G~g~~aM~g~~~~~d~~~awp~A-------~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~~~  517 (569)
T PLN02820        445 IIVGGSFGAGNYGMCGRAYSPNFLFMWPNA-------RIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKTVE  517 (569)
T ss_pred             EEECCcchHHHHHhcCcCCCCCEEEECCCC-------eEEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHHHH
Confidence            99999999865322    356777666555       55566555555555431 0            000 000   01


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChH
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLP  221 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~  221 (350)
                      ..-+..++..+-..|++|.|+++.+-.
T Consensus       518 ~~~~~~~p~~aa~~~~vD~VIdP~dTR  544 (569)
T PLN02820        518 AYEREANPYYSTARLWDDGVIDPADTR  544 (569)
T ss_pred             HHHHhCCHHHHHHcCCcCcccCHHHHH
Confidence            112245667788899999999887654

>PRK08252 enoyl-CoA hydratase; Provisional

Probab=90.28  E-value=0.75  Score=42.27  Aligned_cols=53  Identities=11%  Similarity=0.083  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      ++.+..+++.+.+|.++..++++++.+..   .++.++++.|...+..++.+||.+
T Consensus       185 ~a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~~  237 (254)
T PRK08252        185 AALELAERIAANGPLAVAASKRIVVESGD---WSEDEMFARQRELIAPVFTSADAK  237 (254)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCchHH
Confidence            45566778889999999999999999887   799999999999999998888743

>PRK07658 enoyl-CoA hydratase; Provisional

Probab=90.12  E-value=0.71  Score=42.42  Aligned_cols=53  Identities=15%  Similarity=0.137  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      .+.+..+++.+.+|.++..++++++.+..   .++++.++.|...+..++.+||.+
T Consensus       188 ~a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~  240 (257)
T PRK07658        188 DAKKLAKKIAGKSPATTRAVLELLQTTKS---SSYYEGVKREAKIFGEVFTSEDAK  240 (257)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHHH
Confidence            34556677889999999999999999888   799999999999999999888753

>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated

Probab=89.99  E-value=0.76  Score=42.37  Aligned_cols=52  Identities=13%  Similarity=0.233  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      ++.+..+++...+|.++..+++.++++..   .+++++++.|.+.+..++.+||.
T Consensus       191 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~  242 (260)
T PRK05809        191 EAKALANKIAANAPIAVKLCKDAINRGMQ---VDIDTAVAIEAEDFGECFSTEDQ  242 (260)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            45566678889999999999999999988   79999999999999999988774

>PRK09674 enoyl-CoA hydratase-isomerase; Provisional

Probab=89.41  E-value=0.9  Score=41.77  Aligned_cols=52  Identities=13%  Similarity=0.097  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+++.+.+|.++..++++++++..   .+++++++.|.+.+..++.+++.
T Consensus       186 ~a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~  237 (255)
T PRK09674        186 RALQLASKIARHSPLALRAAKQALRQSQE---VDLQAGLAQERQLFTLLAATEDR  237 (255)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            45566778889999999999999999888   79999999999999999888764

>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]

Probab=89.02  E-value=7  Score=39.66  Aligned_cols=157  Identities=16%  Similarity=0.143  Sum_probs=95.4

Q ss_pred             EEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHH
Q 018834           47 AILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL  125 (350)
Q Consensus        47 ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~  125 (350)
                      |.=|.|. ..-+|+.+-...-.+.++.... .++-.|.|.-. ..|.-|-|-.             .....+...+++++
T Consensus       328 iIANqp~~~~G~l~~~sa~KaArFI~~cd~-~~iPlv~L~d~-pGFm~G~~~E-------------~~giik~Gakl~~A  392 (526)
T COG4799         328 IIANQPRHLGGVLDIDSADKAARFIRLCDA-FNIPLVFLVDT-PGFMPGTDQE-------------YGGIIKHGAKLLYA  392 (526)
T ss_pred             EEecCccccccccchHHHHHHHHHHHhhhc-cCCCeEEEeCC-CCCCCChhHH-------------hChHHHhhhHHHhh
Confidence            4446665 4568899988888888865554 46777777543 6688875532             23445667788999


Q ss_pred             HhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhc-cHHH---HH---------H
Q 018834          126 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-PGHL---GE---------F  192 (350)
Q Consensus       126 i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-~g~~---a~---------~  192 (350)
                      +.++..|.|..|-|.+.|||......-.+-   .+-.|+.|..++|..-+-|+.-.+.|. ....   ..         .
T Consensus       393 ~aeatVPkitvI~rkayGga~~~M~~~~~~---~~~~~AwP~a~iaVMG~egAv~i~~~k~l~~~~~~~~~~~~~~~~~~  469 (526)
T COG4799         393 VAEATVPKITVITRKAYGGAYYVMGGKALG---PDFNYAWPTAEIAVMGPEGAVSILYRKELAAAERPEEREALLRKQLI  469 (526)
T ss_pred             HhhccCCeEEEEecccccceeeeecCccCC---CceeEecCcceeeecCHHHHHHHHHHHHhhcccCchhHHHHHHHHHH
Confidence            999999999999999999986433221111   333444555555565444454444431 1100   00         0


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChH
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLP  221 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~  221 (350)
                      --..-+-.++--|-+.|++|.|+++.+..
T Consensus       470 ~eY~~~~~~p~~aa~r~~iD~vI~p~~tR  498 (526)
T COG4799         470 AEYEEQFSNPYYAAERGYIDAVIDPADTR  498 (526)
T ss_pred             HHHHHhccchHHHHHhCCCCcccCHHHHH
Confidence            00111113455566788999998876543

>PRK06495 enoyl-CoA hydratase; Provisional

Probab=88.59  E-value=1.1  Score=41.19  Aligned_cols=51  Identities=10%  Similarity=0.068  Sum_probs=44.7

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.+++.++++++....   .+++++++.|.+++..++.++|.
T Consensus       189 a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~  239 (257)
T PRK06495        189 AMEIAREIASKSPLATRLAKDALNTIEN---MSLRDGYRYEQDITAKLAKTEDA  239 (257)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcChHH
Confidence            4456678889999999999999999888   89999999999999998888764

>PRK09076 enoyl-CoA hydratase; Provisional

Probab=88.50  E-value=1.3  Score=40.89  Aligned_cols=51  Identities=12%  Similarity=0.112  Sum_probs=45.0

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++.+.+|.++..++++++.+..   .++++.++.|...+..++.+||.
T Consensus       190 a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~  240 (258)
T PRK09076        190 ALALAQKVANQSPSAVAACKTLIQAARN---GPRAAALALERELFVDLFDTEDQ  240 (258)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcCchH
Confidence            4456678899999999999999999887   79999999999999999988874

>PLN02600 enoyl-CoA hydratase

Probab=88.21  E-value=1.2  Score=40.79  Aligned_cols=51  Identities=14%  Similarity=0.272  Sum_probs=45.0

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++.+.+|.++..+++.+++...   .++++.++.|.+.+..++.+||.
T Consensus       183 a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~  233 (251)
T PLN02600        183 ALELAQEINQKGPLAIKMAKKAINEGSE---VDMASGLEIEEECYEQVLKTKDR  233 (251)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            4456678899999999999999998887   79999999999999999988874

>PRK07799 enoyl-CoA hydratase; Provisional

Probab=87.94  E-value=1.5  Score=40.45  Aligned_cols=51  Identities=18%  Similarity=0.193  Sum_probs=44.4

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      .+..+.+.+.+|.++..++++++.+..   .++.++++.|.+.+..++.+|+.+
T Consensus       196 ~~~a~~~~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~~  246 (263)
T PRK07799        196 LELAELINANGPLAVQAILRTIRETEG---MHENEAFKIDTKIGIPVFLSEDAK  246 (263)
T ss_pred             HHHHHHHHhcChHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCccHH
Confidence            345577889999999999999999887   899999999999999998888743

>PRK05980 enoyl-CoA hydratase; Provisional

Probab=87.10  E-value=1.4  Score=40.48  Aligned_cols=52  Identities=15%  Similarity=0.156  Sum_probs=45.0

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +.+..+++.+.+|.++..+++.++++..   .+++++++.|.+.+..++.+||.+
T Consensus       195 a~~~a~~la~~~p~a~~~~K~~~~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~  246 (260)
T PRK05980        195 ARALARRIIRHSPVAVAAILTAVTRGLN---LSIAEGLLIESEQFARMAGSADLR  246 (260)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence            3444567788999999999999999887   799999999999999999988854

>PRK06688 enoyl-CoA hydratase; Provisional

Probab=87.07  E-value=1.5  Score=40.38  Aligned_cols=51  Identities=16%  Similarity=0.149  Sum_probs=44.3

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++.+.+|.++..+++.++++..   .++++++..|.+.+.+++.+|+.
T Consensus       191 a~~~a~~i~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~  241 (259)
T PRK06688        191 ADAQAAKLAAGPASALRYTKRAINAATL---TELEEALAREAAGFGRLLRTPDF  241 (259)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHhhhh---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            3445567788999999999999999888   89999999999999999988874

>PRK08139 enoyl-CoA hydratase; Validated

Probab=86.70  E-value=1.9  Score=39.96  Aligned_cols=51  Identities=4%  Similarity=0.072  Sum_probs=44.5

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++.+.+|.+++.++++++++..   .+++++++.|...+..++.++|.
T Consensus       198 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~  248 (266)
T PRK08139        198 VARLAAVIAAKSPAAVRIGKEAFYRQAE---MPLADAYAYAGDVMAENMMAEDA  248 (266)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcCchH
Confidence            3445577889999999999999999988   89999999999999998888774

>PRK05862 enoyl-CoA hydratase; Provisional

Probab=86.22  E-value=1.9  Score=39.64  Aligned_cols=51  Identities=6%  Similarity=-0.040  Sum_probs=43.9

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      .+..+++.+.+|.++..++++++++..   .+++++++.|.+.+..++.+||.+
T Consensus       190 ~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~~~~  240 (257)
T PRK05862        190 LAAATTIASFSLPAVMMAKEAVNRAYE---TTLAEGLLFERRLFHSLFATEDQK  240 (257)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence            344566788899999999999999887   799999999999999999888753

>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase

Probab=86.16  E-value=1.8  Score=40.33  Aligned_cols=51  Identities=8%  Similarity=-0.086  Sum_probs=44.1

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.+++.++++++++..   .++.++++.|...+..++.+||.
T Consensus       207 ~~~~a~~ia~~~p~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~  257 (275)
T PLN02664        207 VRLIAEGIAAKSPLAVTGTKAVLLRSRE---LSVEQGLDYVATWNSAMLVSDDL  257 (275)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHhccChhH
Confidence            4455678899999999999999999887   79999999999999888887763

>PRK08150 enoyl-CoA hydratase; Provisional

Probab=85.54  E-value=2.1  Score=39.39  Aligned_cols=51  Identities=14%  Similarity=0.034  Sum_probs=43.6

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++.+.+|.++..++++++++..   .++++.++.|.+.+..++.+||.
T Consensus       187 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~s~d~  237 (255)
T PRK08150        187 AMELARRIAQNAPLTNFAVLNALPRIAD---MSADDGLFVESLMAAVAQSAPEA  237 (255)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            3345577889999999999999999877   79999999999998888887764

>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]

Probab=85.49  E-value=7.2  Score=35.69  Aligned_cols=133  Identities=14%  Similarity=0.157  Sum_probs=73.1

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834           57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI  136 (350)
Q Consensus        57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~  136 (350)
                      .+|.++-+.+...|-.++.++.-|=|.+-=    =|.|+++..-.                .+|+.   +..+.-||=..
T Consensus       100 ~Idd~va~~viaqlL~Ld~ed~~K~I~lyI----NSPGG~vtagl----------------AIYDt---Mq~ik~~V~Ti  156 (275)
T KOG0840|consen  100 PIDDDVANLVIAQLLYLDSEDPKKPIYLYI----NSPGGSVTAGL----------------AIYDT---MQYIKPDVSTI  156 (275)
T ss_pred             cCcHHHHHHHHHHHHHhhccCCCCCeEEEE----eCCCCccchhh----------------hHHHH---HHhhCCCceee
Confidence            378888888888888888766656444422    24455542211                12222   33344555555


Q ss_pred             ECCcccccccccccccCEEEEeCCeeEeccccccccc-CCCch----HHHHhh------ccHHH-HHHHhhcCC------
Q 018834          137 LNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH-PDAGA----SFYLSH------LPGHL-GEFLALTGA------  198 (350)
Q Consensus       137 i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~-P~~G~----s~~L~r------l~g~~-a~~l~ltG~------  198 (350)
                      +=|.|.+-|.-|..+     .+..-+++||..++=+. |-+|+    +-+.-+      .--.. -.|.--||+      
T Consensus       157 c~G~Aas~aalLLaa-----G~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~i~  231 (275)
T KOG0840|consen  157 CVGLAASMAALLLAA-----GAKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEIYAKHTGQPLEVIE  231 (275)
T ss_pred             ehhhHHhHHHHHHhc-----CCCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHH
Confidence            556665544333222     24456677777776664 33321    111111      11112 234445665      


Q ss_pred             -------CCCHHHHHHCCCCccccCC
Q 018834          199 -------KLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       199 -------~l~a~eA~~~GLv~~vv~~  217 (350)
                             -++++||+++||+|+|+..
T Consensus       232 ~d~dRd~fmsa~EA~eyGliD~v~~~  257 (275)
T KOG0840|consen  232 KDMDRDRFMSAEEAKEYGLIDKVIDH  257 (275)
T ss_pred             hhhcccccCCHHHHHHhcchhhhhcC
Confidence                   4789999999999999864

>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB

Probab=85.10  E-value=2.4  Score=38.91  Aligned_cols=52  Identities=12%  Similarity=0.038  Sum_probs=44.7

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +.+..+++.+.+|.++..+++.++....   .++.++++.|...+..++.+||.+
T Consensus       188 a~~~a~~la~~~~~~~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~~  239 (256)
T TIGR02280       188 AQALAVHLAAQPTRGLALTKRAIQAAAT---NSLDTQLDLERDLQRELGRSADYA  239 (256)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence            3345567888999999999999999887   789999999999999999888754

This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).

>PRK06494 enoyl-CoA hydratase; Provisional

Probab=85.02  E-value=2.6  Score=38.77  Aligned_cols=51  Identities=12%  Similarity=0.061  Sum_probs=42.2

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHH--HHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVE--STKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E--~~~~~~~~~~~~~  344 (350)
                      +.+..+++.+.+|.++..++++++++..   .+++++++.|  ...+..++.+||.
T Consensus       189 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~d~  241 (259)
T PRK06494        189 AERWADDILACSPLSIRASKQAVYRGLE---VSLEEAITAQRDYPAVEARRASQDY  241 (259)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHHHhcCccH
Confidence            3445567889999999999999999887   7999999999  5677777777764

>PRK07657 enoyl-CoA hydratase; Provisional

Probab=84.62  E-value=2.6  Score=38.84  Aligned_cols=51  Identities=8%  Similarity=0.145  Sum_probs=44.4

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++...+|.+++.++++++.+..   .+++++++.|...+..++.+||.
T Consensus       192 a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~  242 (260)
T PRK07657        192 AIEIAEKIASNGPIAVRQAKEAISNGIQ---VDLHTGLQIEKQAYEGTIPTKDR  242 (260)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcCHhH
Confidence            4455577889999999999999999887   78999999999999999888764

>PRK07938 enoyl-CoA hydratase; Provisional

Probab=84.58  E-value=2.7  Score=38.49  Aligned_cols=53  Identities=4%  Similarity=-0.157  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      .+.+..+++...+|.++..++++++++..   .++++.++.|.+.+..++.++|.+
T Consensus       185 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~d~~  237 (249)
T PRK07938        185 AALEVARKIAAKDTRVIRAAKEALNGIDP---QDVERSYRWEQGFTFELNLAGVSD  237 (249)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHhhcc---CCHHHHHHHHHHHHHHHhcCccHH
Confidence            34455677889999999999999998877   789999999999998888888753

>PRK07659 enoyl-CoA hydratase; Provisional

Probab=84.45  E-value=2.4  Score=39.04  Aligned_cols=51  Identities=4%  Similarity=-0.111  Sum_probs=44.4

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++.+.+|.+++.++++++....   .++++.++.|...+..++.++|.
T Consensus       192 a~~~a~~l~~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~  242 (260)
T PRK07659        192 AKQKISEWLQKPLKAMIETKQIYCELNR---SQLEQVLQLEKRAQYAMRQTADH  242 (260)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCHhH
Confidence            4455677888999999999999998887   79999999999999999888774

>PRK08258 enoyl-CoA hydratase; Provisional

Probab=83.82  E-value=2.9  Score=38.92  Aligned_cols=52  Identities=8%  Similarity=0.050  Sum_probs=44.9

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +.+..+++.+.+|.++..++++++....   .++++.++.|...+..++.+||.+
T Consensus       209 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~~  260 (277)
T PRK08258        209 AQALARRLAAGPTFAHGMTKTMLHQEWD---MGLEEAIEAEAQAQAICMQTEDFR  260 (277)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHhhcc---CCHHHHHHHHHHHHHHHhcCchHH
Confidence            3445577889999999999999999887   899999999999999999888743

>PRK07511 enoyl-CoA hydratase; Provisional

Probab=83.62  E-value=2.6  Score=38.75  Aligned_cols=49  Identities=16%  Similarity=0.101  Sum_probs=43.1

Q ss_pred             HHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          294 TLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       294 ~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      ..+.+.+.+|.+++.+++.++.+..   .++.+.++.|...+..++.+|+.+
T Consensus       196 ~a~~l~~~~~~~~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~  244 (260)
T PRK07511        196 LADQLAAGSPNALARIKSLIADAPE---ATLAAQLEAERDHFVASLHHADAL  244 (260)
T ss_pred             HHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCchHH
Confidence            4456778899999999999999888   899999999999999999998754

>PRK07509 enoyl-CoA hydratase; Provisional

Probab=83.41  E-value=3  Score=38.35  Aligned_cols=52  Identities=13%  Similarity=0.018  Sum_probs=45.0

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +.+..+++.+.+|.++..+++.+++...   .++.++++.|.+.+..++.+||.+
T Consensus       195 a~~~a~~l~~~~~~~~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~d~~  246 (262)
T PRK07509        195 ALALAREIAQRSPDAIAAAKRLINRSWT---ASVRALLARESVEQIRLLLGKNQK  246 (262)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence            4456677888999999999999999887   799999999999999998888753

>PRK06072 enoyl-CoA hydratase; Provisional

Probab=83.15  E-value=2.9  Score=38.21  Aligned_cols=51  Identities=12%  Similarity=-0.094  Sum_probs=44.3

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++.+.+|.++..+++++++...   .++++.++.|.+.+..++.+||.
T Consensus       180 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~d~  230 (248)
T PRK06072        180 AEEMANRISNGPFQSYIAAKRMINLVLY---NDLEEFLEYESAIQGYLGKTEDF  230 (248)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHhh---cCHHHHHHHHHHHHHHHhCChhH
Confidence            4456677888999999999999998877   78999999999999999888874

>PRK06142 enoyl-CoA hydratase; Provisional

Probab=83.12  E-value=3.2  Score=38.51  Aligned_cols=51  Identities=12%  Similarity=0.023  Sum_probs=43.8

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++.+.+|.+++.+++.+++...   .+++++++.|...+..++.+||.
T Consensus       205 a~~~a~~ia~~~~~a~~~~K~~l~~~~~---~~l~~~~~~~~~~~~~~~~~~d~  255 (272)
T PRK06142        205 AHATAREIAAKSPLAVRGTKEVLDYMRD---HRVADGLRYVATWNAAMLPSKDL  255 (272)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCccH
Confidence            3345567788999999999999998877   78999999999999998888774

>PRK06143 enoyl-CoA hydratase; Provisional

Probab=82.98  E-value=3.1  Score=38.23  Aligned_cols=51  Identities=16%  Similarity=0.109  Sum_probs=44.4

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+++...+|.++..++++++.+..   .++++.++.|...+..++.++|.
T Consensus       194 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~d~  244 (256)
T PRK06143        194 VERLAASLAGCGPQALRQQKRLLREWED---MPLDVAIDDSVAEFGAAFLTGEP  244 (256)
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHhcChHH
Confidence            4455677889999999999999999877   78999999999999998888874

>PRK06563 enoyl-CoA hydratase; Provisional

Probab=82.87  E-value=3.6  Score=37.78  Aligned_cols=50  Identities=14%  Similarity=0.176  Sum_probs=43.2

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+..+.+.+.+|.+++.++++++....   .++.++++.|...+..++.++|.
T Consensus       188 ~~~a~~la~~~~~a~~~~K~~~~~~~~---~~~~~~~~~e~~~~~~~~~~~d~  237 (255)
T PRK06563        188 IELAERIARAAPLGVQATLASARAAVR---EGEAAAAAQLPPELRPLFTSEDA  237 (255)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCchH
Confidence            344567788999999999999998877   79999999999999999888874

>PRK08138 enoyl-CoA hydratase; Provisional

Probab=82.51  E-value=3.4  Score=38.04  Aligned_cols=49  Identities=14%  Similarity=0.157  Sum_probs=42.4

Q ss_pred             HHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          294 TLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       294 ~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      ..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.+|+.+
T Consensus       196 ~a~~l~~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~~  244 (261)
T PRK08138        196 LAREIARMPPLALAQIKEVVLAGAD---APLDAALALERKAFQLLFDSEDQK  244 (261)
T ss_pred             HHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcCHHHH
Confidence            3455678899999999999999888   799999999999999999888753

>PRK08140 enoyl-CoA hydratase; Provisional

Probab=81.89  E-value=3.7  Score=37.77  Aligned_cols=51  Identities=8%  Similarity=-0.018  Sum_probs=43.9

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.++..+++++++...   .+++++++.|...+..++.+||.
T Consensus       194 a~~~a~~ia~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~~~  244 (262)
T PRK08140        194 AQQLAAHLATQPTRGLALIKQAMNASAT---NTLDAQLDLERDLQREAGRSADY  244 (262)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhhh---CCHHHHHHHHHHHHHHHhcChhH
Confidence            3445577788999999999999998887   79999999999999998888774

>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated

Probab=81.39  E-value=2.9  Score=38.27  Aligned_cols=51  Identities=12%  Similarity=-0.027  Sum_probs=44.7

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      .+..+++.+.+|.++..+++++++...   .++++.++.|...+..++.++|.+
T Consensus       190 ~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~~  240 (249)
T PRK07110        190 LELARSLAEKPRHSLVLLKDHLVADRR---RRLPEVIEQEVAMHEKTFHQPEVK  240 (249)
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHhhh---ccHHHHHHHHHHHHHHHhCCHhHH
Confidence            345577889999999999999999888   899999999999999999988753

>PRK06210 enoyl-CoA hydratase; Provisional

Probab=80.83  E-value=4.1  Score=37.70  Aligned_cols=48  Identities=21%  Similarity=0.147  Sum_probs=41.0

Q ss_pred             HHHHHHhc-CcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          294 TLRLLKEA-SPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       294 ~l~~~~~~-sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      ..+++.++ +|.++..+++++++...   .+++++++.|...+..++.+|+.
T Consensus       206 ~a~~i~~~~~p~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~  254 (272)
T PRK06210        206 YAEDLARNVSPASMAVIKRQLYEDAF---QTLAEATARANREMHESLQRPDF  254 (272)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHhccc---CCHHHHHHHHHHHHHHHhcCccH
Confidence            34556664 99999999999999877   79999999999999999888864

>PRK07827 enoyl-CoA hydratase; Provisional

Probab=80.14  E-value=4.6  Score=37.14  Aligned_cols=52  Identities=13%  Similarity=0.029  Sum_probs=44.9

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +.+..+++.+.+|.++..+++++++...   .++++.++.|...+..++.+|+.+
T Consensus       193 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  244 (260)
T PRK07827        193 VAALLADLRRGSPQGLAESKALTTAAVL---AGFDRDAEELTEESARLFVSDEAR  244 (260)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcChhHH
Confidence            4456678889999999999999999887   799999999999999888887653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	350
3bpt_A	363	Crystal Structure Of Human Beta-Hydroxyisobutyryl-C		6e-52
4hdt_A	353	Crystal Structure Of A Carnitinyl-Coa Dehydratase F		5e-34
4j2u_A	365	Crystal Structure Of An Enoyl-coa Hydratase From Rh		4e-27
3ju1_A	407	Crystal Structure Of Enoyl-Coa HydrataseISOMERASE F		1e-23
2hw5_A	286	The Crystal Structure Of Human Enoyl-Coenzyme A (Co		3e-16
1ey3_A	258	Structure Of Enoyl-Coa Hydratase Complexed With The		2e-14
1dub_A	261	2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph		2e-14
1mj3_A	260	Crystal Structure Analysis Of Rat Enoyl-Coa Hydrata		2e-14
3q0j_A	258	Crystal Structure Of The Mycobacterium Tuberculosis		3e-14
3pzk_A	257	Crystal Structure Of The Mycobacterium Tuberculosis		3e-14
2ej5_A	257	Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydr		3e-14
3h81_A	278	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		3e-14
3r0o_A	273	Crystal Structure Of Carnitinyl-Coa Hydratase From		5e-14
3hrx_A	254	Crystal Structure Of Phenylacetic Acid Degradation		6e-14
2pbp_A	258	Crystal Structure Of Enoyl-Coa Hydrates Subunit I (		4e-13
3moy_A	263	Crystal Structure Of Probable Enoyl-Coa Hydratase F		1e-12
3r9t_A	267	Structure Of Echa1_1 From Mycobacterium Paratubercu		6e-12
3r9s_A	267	Structure Of A Carnitinyl-Coa Dehydratase From Myco		8e-12
3rrv_A	276	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		8e-12
3qmj_A	256	Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 Fr		2e-11
3p5m_A	255	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		2e-11
3rsi_A	265	The Structure Of A Putative Enoyl-Coa HydrataseISOM		7e-11
2vsu_A	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		8e-11
2vsu_C	275	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		8e-11
2vsu_F	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		9e-11
2vsu_E	276	A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase		9e-11
2j5i_I	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		9e-11
2j5i_B	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		9e-11
2j5i_A	276	Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase		1e-10
2vss_E	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		1e-10
2vss_F	276	Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In C		1e-10
4f47_A	278	The Structure Of Enoyl-Coa Hydratase Echa19 From My		2e-09
4fzw_A	258	Crystal Structure Of The Paaf-paag Hydratase-isomer		4e-09
3tlf_A	274	Crystal Structure Of An Enoyl-Coa HydrataseISOMERAS		6e-09
1uiy_A	253	Crystal Structure Of Enoyl-Coa Hydratase From Therm		8e-09
3p85_A	270	Crystal Structure Enoyl-Coa Hydratase From Mycobact		2e-08
3qyr_A	253	Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 M		2e-08
2f6q_A	280	The Crystal Structure Of Human Peroxisomal Delta3,		2e-08
3kqf_A	265	1.8 Angstrom Resolution Crystal Structure Of Enoyl-		3e-08
3qxz_A	265	Crystal Structure Of A Probable Enoyl-Coa Hydratase		5e-08
2vre_A	296	Crystal Structure Of Human Peroxisomal Delta3,5, De		8e-08
3sll_A	290	Crystal Structure Of A Probable Enoyl-Coa Hydratase		2e-07
4fzw_C	274	Crystal Structure Of The Paaf-paag Hydratase-isomer		2e-07
3pea_A	261	Crystal Structure Of Enoyl-Coa Hydratase From Bacil		3e-07
3pe8_A	256	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		4e-07
3qka_A	261	Crystal Structure Of Enoyl-Coa Hydratase Echa5 From		7e-07
1dci_A	275	Dienoyl-Coa Isomerase Length = 275		1e-06
3lke_A	263	Crystal Structure Of Enoyl-Coa Hydratase From Bacil		1e-06
3myb_A	286	Crystal Structure Of Enoyl-Coa Hydratase Mycobacter		2e-06
1nzy_A	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		2e-06
3oc7_A	267	Crystal Structure Of An Enoyl-Coa Hydratase From My		2e-06
1nzy_B	269	4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudo		3e-06
2uzf_A	273	Crystal Structure Of Staphylococcus Aureus 1,4-Dihy		3e-06
3he2_A	264	Crystal Structure Of Enoyl-Coa Hydratase From Mycob		3e-06
1jxz_A	269	Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coe		5e-06
3fdu_A	266	Crystal Structure Of A Putative Enoyl-Coa Hydratase		5e-06
2iex_A	272	Crystal Structure Of Dihydroxynapthoic Acid Synthet		6e-06
3trr_A	256	Crystal Structure Of A Probable Enoyl-Coa Hydratase		1e-05
3hin_A	275	Crystal Structure Of Putative Enoyl-Coa Hydratase F		4e-05
3ome_A	282	Crystal Structure Of A Probable Enoyl-Coa Hydratase		6e-05
3t3w_A	279	Crystal Structure Of Probable Enoyl-Coa Hydratase F		8e-05
3g64_A	279	Crystal Structure Of Putative Enoyl-Coa Hydratase F		1e-04
3qxi_A	265	Crystal Structure Of Enoyl-Coa Hydratase Echa1 From		2e-04
2vx2_A	287	Crystal Structure Of Human Enoyl Coenzyme A Hydrata		2e-04
3i47_A	268	Crystal Structure Of Putative Enoyl Coa HydrataseIS		2e-04
3qk8_A	272	Crystal Structure Of Enoyl-Coa Hydratase Echa15 Fro		9e-04

>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa Hydrolase In Complex With Quercetin Length = 363

Iteration: 1
 Score =  201 bits (510), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 116/294 (39%), Positives = 169/294 (57%), Gaps = 9/294 (3%)
Query: 31  DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-R 89
           D   +VL+  K  + +  LNRP  LNAL  N   ++    K WE DP    + +KG+G +
Sbjct: 3   DAAEEVLLGKKGCTGVITLNRPKFLNALTLNXIRQIYPQLKKWEQDPETFLIIIKGAGGK 62
Query: 90  AFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVS 149
           AFCAGGDI  +     + K +    FFR  Y     +G+  KP+VA+++G+T GGG G+S
Sbjct: 63  AFCAGGDIRVISE-AEKAKQKIAPVFFREEYXLNNAVGSCQKPYVALIHGITXGGGVGLS 121
Query: 150 IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACG 209
           + G FRVA  K +FA PET IG  PD G  ++L  L G LG FLALTG +L G ++   G
Sbjct: 122 VHGQFRVATEKCLFAXPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAG 181
Query: 210 LATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKY--SDLVYPDKNSVIHR-IDIVDKC 266
           +ATH+  SEKL  +EE+L  L +     I + LE Y     +  DK+ ++    D ++ C
Sbjct: 182 IATHFVDSEKLAXLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHXDKINSC 241
Query: 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGT 320
           F  +TVEEII++L+ + S     +    L+++ + SP SLK++LR + EG S T
Sbjct: 242 FSANTVEEIIENLQQDGS----SFALEQLKVINKXSPTSLKITLRQLXEGSSKT 291

>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Thermoresistibile Length = 353

Iteration: 1
 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 149/285 (52%), Gaps = 14/285 (4%)
Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFC 92
             VLV  +    +  LNRP A+N+L   M   + +   AWEND ++  V + G+G R  C
Sbjct: 9   EDVLVNVEGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLC 68
Query: 93  AGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPG 152
           AGGD+V++YH   +    E + F+   Y     +G + KP+V+I++G+ MGGG GV   G
Sbjct: 69  AGGDVVAIYHSA-KADGAEARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHG 127
Query: 153 TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLAT 212
             RV    T  A PE  IGF PD G ++ LS  PG LG   ALTGA  +GA+ +  G A 
Sbjct: 128 NVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPGKLGLHAALTGAPFSGADAIVMGFAD 187
Query: 213 HYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTV 272
           HY   +K+    +E  + V  D   ++A L  ++    P  + +  +   +D+C+  DTV
Sbjct: 188 HYVPHDKI----DEFTRAVIADG--VDAALAAHAQ--EPPASPLAEQRSWIDECYTGDTV 239
Query: 273 EEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGG 317
            +II +L +     + P  G    L+   SP++L V+L S+R   
Sbjct: 240 ADIIAALRAH----DAPAAGEAADLIATRSPIALSVTLESVRRAA 280

>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From Rhodobacter Sphaeroides 2.4.1 Length = 365

Iteration: 1
 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 132/290 (45%), Gaps = 31/290 (10%)
Query: 26  SSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMK 85
            S +D L  +V   G+       L+RP+ALNAL      +++   + W  DP +  V + 
Sbjct: 21  QSXSDVLIRKVRRAGRIT-----LSRPAALNALTCAXVQEIDAALRGWIGDPEVELVVID 75
Query: 86  GSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGG 144
             G RAFCAGGDI  L+     G     +DF+R  Y     +    KP V++  G T GG
Sbjct: 76  AEGPRAFCAGGDIAELHGRGVAGDHAFGQDFWRVEYRXNDRIAAFPKPIVSLXQGFTXGG 135
Query: 145 GAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAE 204
           G G+      R+    +  + PE  IG  PD G +  L+  PG +G +L LTGA+    +
Sbjct: 136 GVGLGCHARHRIVGETSQISXPECAIGLVPDVGGTHLLARAPGRIGVWLGLTGARXGPGD 195
Query: 205 MMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRI---- 260
            +  G A  + V E              D P +I A LE   DL  PD  +   R+    
Sbjct: 196 AIFAGFADRF-VPE-------------ADWPDLI-AALEG-GDLALPDHAAPEGRLPVLQ 239
Query: 261 DIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSL 310
           D +D+ F   T+ EI   LE+     + P     L+ L+ +SPL+L  +L
Sbjct: 240 DEIDRLFA-GTLAEIPARLEA----TDTPLAAEALKALRRSSPLALAATL 284

>pdb|3JU1|A Chain A, Crystal Structure Of Enoyl-Coa HydrataseISOMERASE FAMILY PROTEIN Length = 407

Iteration: 1
 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/173 (38%), Positives = 91/173 (52%), Gaps = 4/173 (2%)
Query: 46  MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYH-- 102
           +  LN   ALNAL+ +           W+ DP I  V + GSG +AFCAGGD+ +LYH  
Sbjct: 54  VVTLNVEKALNALDLDXVRAXTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHAS 113
Query: 103 FMNQGKLEE-CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
              +G++ E  K FF   Y   YLL T+ KP +   +G+  GGG G+    + +V    +
Sbjct: 114 VAAKGQVTEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVXGGGLGLXAGASHKVVTETS 173
Query: 162 VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214
             A PE  IG +PD G S++L+  PG  G FL LT    N A+    GLA HY
Sbjct: 174 RIAXPEVTIGLYPDVGGSYFLNRXPGKXGLFLGLTAYHXNAADACYVGLADHY 226

>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa) Hydratase Short Chain 1, Echs1 Length = 286

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/185 (32%), Positives = 87/185 (47%), Gaps = 19/185 (10%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP ALNAL   +  +LN+  K +E DP +G + + G  +AF AG DI  + +      
Sbjct: 48  LNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEMQNLS---- 103
Query: 109 LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
                  F+  YS  +L     L    KP +A +NG   GGG  +++      A  K  F
Sbjct: 104 -------FQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQF 156
Query: 164 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPL 222
           A PE LIG  P AG +  L+   G  L   + LTG +++  +    GL +     E   L
Sbjct: 157 AQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVE--TL 214
Query: 223 IEEEL 227
           +EE +
Sbjct: 215 VEEAI 219

>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The Substrate Dac-Coa Length = 258

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI  + +      
Sbjct: 20  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRT---- 75
Query: 109 LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
                  F+  YS  +L     +    KP +A +NG  +GGG  +++      A  K  F
Sbjct: 76  -------FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 128
Query: 164 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLP- 221
             PE L+G  P AG +  L+   G  L   + LTG +++  +    GL     VS+  P 
Sbjct: 129 GQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGL-----VSKIFPV 183
Query: 222 --LIEEEL 227
             L+EE +
Sbjct: 184 ETLVEEAI 191

>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5 Length = 261

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI  + +      
Sbjct: 23  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRT---- 78
Query: 109 LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
                  F+  YS  +L     +    KP +A +NG  +GGG  +++      A  K  F
Sbjct: 79  -------FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 131
Query: 164 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLP- 221
             PE L+G  P AG +  L+   G  L   + LTG +++  +    GL     VS+  P 
Sbjct: 132 GQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGL-----VSKIFPV 186
Query: 222 --LIEEEL 227
             L+EE +
Sbjct: 187 ETLVEEAI 194

>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In Complex With Hexadienoyl-Coa Length = 260

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 25/188 (13%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI  + +      
Sbjct: 22  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRT---- 77
Query: 109 LEECKDFFRTLYSFIYL-----LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
                  F+  YS  +L     +    KP +A +NG  +GGG  +++      A  K  F
Sbjct: 78  -------FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQF 130
Query: 164 ATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHYSVSEKLP- 221
             PE L+G  P AG +  L+   G  L   + LTG +++  +    GL     VS+  P 
Sbjct: 131 GQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGL-----VSKIFPV 185
Query: 222 --LIEEEL 227
             L+EE +
Sbjct: 186 ETLVEEAI 193

>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Complex With The Inhibitor Acetoacetylcoa Length = 258

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LVE      +  LNRP ALNALN+ +  ++       ++DP+IG + + GS +AF AG 
Sbjct: 7   ILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGA 66
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           DI  +             DFF T       L     P +A + G  +GGG  +++     
Sbjct: 67  DIKEMADLTFADAF--TADFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVL 120
Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHY 214
           +A     F  PE  +G  P  G S  L+   G      L LTG  ++ AE    GL +  
Sbjct: 121 IAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRV 180
Query: 215 SVSEKL 220
             ++ L
Sbjct: 181 VPADDL 186

>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Crotonase In Apo Form Length = 257

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LVE      +  LNRP ALNALN+ +  ++       ++DP+IG + + GS +AF AG 
Sbjct: 6   ILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGA 65
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           DI  +             DFF T       L     P +A + G  +GGG  +++     
Sbjct: 66  DIKEMADLTFADAF--TADFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVL 119
Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHY 214
           +A     F  PE  +G  P  G S  L+   G      L LTG  ++ AE    GL +  
Sbjct: 120 IAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRV 179
Query: 215 SVSEKL 220
             ++ L
Sbjct: 180 VPADDL 185

>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase Subunit Ii) From Geobacillus Kaustophilus Length = 257

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/168 (35%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +  E K       LNRP  LNA    M A++ K  K    DPN+  V + G+GRAFCAG 
Sbjct: 5   IRYEVKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGE 64
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTF 154
           D+  +   M+ G      D  R+ Y+ +     HL KP VA +NG   G G  +++   F
Sbjct: 65  DLSGVTEEMDHG------DVLRSRYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDF 118
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLN 201
           R+   K  FA     +G  PDAG  +YL  L G      LA+ G K+ 
Sbjct: 119 RLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVT 166

>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 278

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 7/186 (3%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LVE      +  LNRP ALNALN+ +  ++       ++DP+IG + + GS +AF AG 
Sbjct: 27  ILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGA 86
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           DI  +             DFF T       L     P +A + G  +GGG  +++     
Sbjct: 87  DIKEMADLTFADAF--TADFFATWGK----LAAVRTPTIAAVAGYALGGGCELAMMCDVL 140
Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHY 214
           +A     F  PE  +G  P  G S  L+   G      L LTG  ++ AE    GL +  
Sbjct: 141 IAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRV 200
Query: 215 SVSEKL 220
             ++ L
Sbjct: 201 VPADDL 206

>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From Mycobacterium Avium Length = 273

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 25  SSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSM 84
           + ++T+      +VE + N  +  ++RP A NA+N  +   +    +  + DP +  V +
Sbjct: 6   AETLTEVTRQAAVVERRGNVALITIDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVI 65
Query: 85  KGSG-RAFCAGGDIVSLYHFMNQGKLEECK-DFFRTLYSFIYLLGTHLKPHVAILNGVTM 142
            G+G ++FCAG D+ ++    N    E  +  F   ++ FI       KP +A +NG  +
Sbjct: 66  TGAGDKSFCAGADLKAISRGENLYHAEHPEWGFAGYVHHFID------KPTIAAVNGTAL 119
Query: 143 GGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLN 201
           GGG+ +++     +AC    F  PE   G    AG  F +   LP  +   L LTG  + 
Sbjct: 120 GGGSELALASDLVIACESASFGLPEVKRGLIAGAGGVFRIVEQLPRKVALELVLTGEPMT 179
Query: 202 GAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACL 242
            ++ +  GL     ++E +P            D +V+EA L
Sbjct: 180 ASDALRWGL-----INEVVP------------DGTVVEAAL 203

>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein Paag Length = 254

Iteration: 1
 Score = 74.7 bits (182), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 87/193 (45%), Gaps = 8/193 (4%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           VL E +    +  LNRP  LNA+   +   L    K  E D  +  + + G+GRAF AG 
Sbjct: 2   VLKERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQ 61
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D   L  F ++    + +   R     +  L    KP V  +NGV  G G  +++ G  R
Sbjct: 62  D---LTEFGDRKP--DYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLR 116
Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATHY 214
           +A     F T    IG  PD+G SF L  L G    + L L   +L+  E +A GL    
Sbjct: 117 LAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRV 176
Query: 215 SVSEKLPLIEEEL 227
             +EK  L+EE L
Sbjct: 177 VPAEK--LMEEAL 187

>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I (Gk_2039) From Geobacillus Kaustophilus Hta426 Length = 258

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 19/211 (9%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L RP  LNAL+  M A++    +A++ +  +  + + G GRAF AG DI  +    +  +
Sbjct: 20  LARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAK-DDPIR 78
Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
           LE    F    +  + ++ T   P +A +NG+ +GGG  +++     VA     F  PE 
Sbjct: 79  LEWLNQF--ADWDRLSIVKT---PMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEV 133
Query: 169 LIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE 226
            +G  P AG +  L+ L  P    E+L  TGA+++  E    G+     VS +L L+EE 
Sbjct: 134 NLGVMPGAGGTQRLTKLIGPKRALEWL-WTGARMSAKEAEQLGIVNRV-VSPEL-LMEET 190
Query: 227 L---GKLVTDDP---SVIEACLEKYSDLVYP 251
           +   G+L    P    +I+  ++K  D  YP
Sbjct: 191 MRLAGRLAEQPPLALRLIKEAVQKAVD--YP 219

>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycob Smegmatis Length = 263

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 20/233 (8%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+RP ALNALN  + A++    + ++ D  IG + + GS RAF AG DI  +        
Sbjct: 25  LDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQA 84
Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            E      R L S    L    KP VA + G  +GGG  +++     +A     F  PE 
Sbjct: 85  RE------RNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEI 138
Query: 169 LIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATH-----------YSV 216
            +G  P  G +  L+   G      L LTG  L   E    GL +             +V
Sbjct: 139 TLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAV 198
Query: 217 SEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL 269
           ++++  +    G+ V D  ++ EA     S  +  ++++     D  D+  G+
Sbjct: 199 AQRIARMSRPAGRAVKD--AINEAFERPLSAGMRYERDAFYAMFDTHDQTEGM 249

>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 267

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 27  SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86
           S+TD      L E + N  +  +NRP A NA+N  +   +    +  ++DP +  V + G
Sbjct: 4   SMTD--APGALAERRGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTG 61
Query: 87  SG-RAFCAGGDIVSLYHFMNQGKLEECK-DFFRTLYSFIYLLGTHLKPHVAILNGVTMGG 144
           +G ++FCAG D+ ++    N    +  +  F   +  FI       KP +A +NG  +GG
Sbjct: 62  AGDKSFCAGADLKAIARRENLYHPDHPEWGFAGYVRHFID------KPTIAAVNGTALGG 115
Query: 145 GAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLS-HLPGHLGEFLALTGAKLNGA 203
           G  +++     VA  +  F  PE   G    AG  F ++  LP  +   L LTG  L+ A
Sbjct: 116 GTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAA 175
Query: 204 EMMACGL 210
                GL
Sbjct: 176 AARDWGL 182

>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From Mycobacterium Avium 104 Length = 267

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 11/187 (5%)
Query: 27  SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86
           S+TD      L E + N  +  +NRP A NA+N  +   +    +  ++DP +  V + G
Sbjct: 4   SMTD--APGALAERRGNVMVITINRPEARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTG 61
Query: 87  SG-RAFCAGGDIVSLYHFMNQGKLEECK-DFFRTLYSFIYLLGTHLKPHVAILNGVTMGG 144
           +G ++FCAG D+ ++    N    +  +  F   +  FI       KP +A +NG  +GG
Sbjct: 62  AGDKSFCAGADLKAIARRENLYHPDHPEWGFAGYVRHFID------KPTIAAVNGTALGG 115
Query: 145 GAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLS-HLPGHLGEFLALTGAKLNGA 203
           G  +++     VA  +  F  PE   G    AG  F ++  LP  +   L LTG  L+ A
Sbjct: 116 GTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAA 175
Query: 204 EMMACGL 210
                GL
Sbjct: 176 AARDWGL 182

>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 276

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 82/197 (41%), Gaps = 3/197 (1%)
Query: 20  SQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNI 79
           +Q +   S+  D+  ++ V      R+  LNRP +LN++N ++   L +L++   +DP  
Sbjct: 14  AQTQGPGSMVYDMPTEIDVRADGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTA 73
Query: 80  GFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG 139
               + G+GRAF AGGD   L        L       R     +  +     P VA +NG
Sbjct: 74  RAAVITGAGRAFSAGGDFGYLKELSADADLR--AKTIRDGREIVLGMARCRIPVVAAVNG 131
Query: 140 VTMGGGAGVSIPGTFRVACGKTVFATPETLIGF-HPDAGASFYLSHLPGHLGEFLALTGA 198
             +G G  +               A P   +G    D G   +  H+   L +  ALTG 
Sbjct: 132 PAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGT 191
Query: 199 KLNGAEMMACGLATHYS 215
           +++    +  GLA H +
Sbjct: 192 RISAQRAVELGLANHVA 208

>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From Mycobacterium Marinum Length = 256

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 76/178 (42%), Gaps = 6/178 (3%)
Query: 45  RMAILNRPSALNALNTNM-GAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHF 103
           R   LNRP ALNA N  +  A    L  A  +DP +  V + GSGR F AG D+  +   
Sbjct: 17  RTLTLNRPEALNAFNEALYDATAQALLDA-ADDPQVAVVLLTGSGRGFSAGTDLAEMQAR 75
Query: 104 MNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
           +      E K  FR L   I  L    KP +  +NG+ +G GA +               
Sbjct: 76  ITDPNFSEGKFGFRGL---IKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARL 132
Query: 164 ATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKL 220
             P T +G  P+A +S+ L  L G     +L ++   ++  E +  GL       E+L
Sbjct: 133 KCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWIDAEEALRMGLVWRICSPEEL 190

>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Avium Length = 255

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 91/190 (47%), Gaps = 11/190 (5%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+RP  LNA++T M  +L+   +  E D ++  V + G+GRAFC+GGD   L      G 
Sbjct: 21  LDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGD---LTGGDTAGA 77
Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            +      R + S         KP +A ++G  +G G  +++     VA   + F    T
Sbjct: 78  ADAANRVVRAITSLP-------KPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFT 130
Query: 169 LIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL 227
            +G  PD GAS  L  L G      +A+T  K++ A     G+ +H + +++   +  ++
Sbjct: 131 RVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITSADEYESVLTDV 190
Query: 228 GKLVTDDPSV 237
            + V+  P++
Sbjct: 191 LRSVSGGPTL 200

>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Atcc 19977 DSM 44196 Length = 265

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
Query: 33  CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFC 92
             ++LVE      +  +NRP   NAL+TNM ++    +   ++D  I    + G+G A+C
Sbjct: 8   ARELLVERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYC 67
Query: 93  AGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPG 152
            GGD+   +  +  G          T+   + L  T  KP +A +NG  +GGG  +    
Sbjct: 68  VGGDLSDGW-MVRDGSAPPLDPA--TIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQT 124
Query: 153 TFRVACGKTVFATPETLIGFHPDAGASFYLS-HLPGHLGEFLALTGAKLNGAEMMACGLA 211
             RV+     F  PE   G  P AG+   L   +P      + LTG  L   E    GL 
Sbjct: 125 DIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFGLV 184
Query: 212 TH 213
            H
Sbjct: 185 GH 186

>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism. Length = 276

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDL 130
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH    +  +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
Query: 214 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 241
                +L  +  EL + L+  +P V+ A 
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219

>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 275

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDL 130
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH    +  +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
Query: 214 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 241
                +L  +  EL + L+  +P V+ A 
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219

>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDL 130
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH    +  +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
Query: 214 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 241
                +L  +  EL + L+  +P V+ A 
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219

>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase ( Hchl) With Acetyl-Coenzyme A And Vanillin Gives Insights Into Substrate Specificity And Mechanism Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDL 130
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH    +  +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
Query: 214 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 241
                +L  +  EL + L+  +P V+ A 
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219

>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDL 130
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH    +  +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
Query: 214 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 241
                +L  +  EL + L+  +P V+ A 
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219

>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDL 130
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH    +  +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
Query: 214 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 241
                +L  +  EL + L+  +P V+ A 
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219

>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDL 130
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFL-ALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH    +  +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNE 190
Query: 214 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 241
                +L  +  EL + L+  +P V+ A 
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219

>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDL 130
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH    +  +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
Query: 214 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 241
                +L  +  EL + L+  +P V+ A 
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219

>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex With Acetyl-Coa And Vanillin Length = 276

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDL 130
Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE-FLALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH    +  +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNE 190
Query: 214 YSVSEKLPLIEEELGK-LVTDDPSVIEAC 241
                +L  +  EL + L+  +P V+ A 
Sbjct: 191 SVPLAQLREVTIELARNLLEKNPVVLRAA 219

>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From Mycobacterium Marinum Length = 278

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 80/184 (43%), Gaps = 12/184 (6%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWE---NDPNIGFVSMKGSGRAFC 92
            LVE + ++ +  +NRPS  NAL+  M   +  + +AW+   NDP+I    + G+G  FC
Sbjct: 22  ALVEQRGHTLIVTMNRPSRRNALSGEM---MQIMVEAWDRVDNDPDIRCCILTGAGGYFC 78
Query: 93  AGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLL-GTHL-KPHVAILNGVTMGGGAGVSI 150
           AG D   L     +   +  KD          LL G  L KP +A + G  + GG  +  
Sbjct: 79  AGMD---LKAATKKPPGDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQ 135
Query: 151 PGTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLNGAEMMACG 209
               RVA     F   E     +P  G++  L   +P  +   L LTG  +  AE    G
Sbjct: 136 GTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMG 195
Query: 210 LATH 213
           L  H
Sbjct: 196 LVGH 199

>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 258

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 15/184 (8%)
Query: 34  NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           ++++V  +    +  LNRP+A NALN  +  +L    +A   D +I    + G+ R F A
Sbjct: 5   SELIVSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAA 64
Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL----KPHVAILNGVTMGGGAGVS 149
           G D+  +            KD   TL      L   L    KP +A +NG  +G G  ++
Sbjct: 65  GADLNEMAE----------KDLAATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELA 114
Query: 150 IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMAC 208
           +     VA     F  PE  +G  P AG +  L    G  L   + L+G  +   +    
Sbjct: 115 LLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQA 174
Query: 209 GLAT 212
           GL +
Sbjct: 175 GLVS 178

>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Paratuberculosis Length = 274

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 9/130 (6%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP ALNAL+ +M  +L   +   END  +  + + G+GRAFC+G D+  +      GK
Sbjct: 26  LNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEI---PEDGK 82
Query: 109 LEECKDFFRTLYSF------IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV 162
           +   + +  T   +           T  KP +  +NG+  G G          +A  +  
Sbjct: 83  VIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQAT 142
Query: 163 FATPETLIGF 172
           F  P   IG 
Sbjct: 143 FFDPHVSIGL 152

>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus Thermophilus Hb8 Length = 253

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 1/175 (0%)
Query: 41  KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSL 100
           K +  +  LN P   N L+      L +     E DP +  V + G G+AF AG D+  L
Sbjct: 6   KGHVAVVFLNDPERRNPLSPEXALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFL 65
Query: 101 YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK 160
                 G  E  +    +L    + + T+ KP VA +NG  + GGAG+++     V   +
Sbjct: 66  ERVTELGAEENYRHSL-SLXRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVXDEE 124
Query: 161 TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYS 215
                 E  IGF     +   +  +     + L LTG  +   E  A GL    +
Sbjct: 125 ARLGYTEVKIGFVAALVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRIA 179

>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium Avium Length = 270

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 30/252 (11%)
Query: 20  SQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNI 79
           +Q +   S+TD++   +L   +   R   LNRP A NAL+  +  +        E D ++
Sbjct: 14  AQTQGPGSMTDEI---LLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDV 70
Query: 80  GFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG 139
             V + G+   FCAG D   L        L +    +  L           KP +  +NG
Sbjct: 71  DVVIITGADPVFCAGLD---LKELGGSSALPDISPRWPALT----------KPVIGAING 117
Query: 140 VTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HLGEFLALTGA 198
             + GG  +++     +A     FA     +G  P  G S  L    G  L   ++LTG 
Sbjct: 118 AAVTGGLELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGD 177
Query: 199 KLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI 257
            L+ A+ +  GL T     ++L      +   +V ++ + + A L  Y            
Sbjct: 178 YLSAADALRAGLVTEVVPHDQLLGAARAVAASIVGNNQNAVRALLTSY------------ 225
Query: 258 HRIDIVDKCFGL 269
           HRID      GL
Sbjct: 226 HRIDDAQTSAGL 237

>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2 Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 30/245 (12%)
Query: 27  SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86
           S+TD++   +L   +   R   LNRP A NAL+  +  +        E D ++  V + G
Sbjct: 4   SMTDEI---LLSNTEERVRTLTLNRPQARNALSAALRDRFFGALADAETDDDVDVVIITG 60
Query: 87  SGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGA 146
           +   FCAG D   L        L +    +  L           KP +  +NG  + GG 
Sbjct: 61  ADPVFCAGLD---LKELGGSSALPDISPRWPALT----------KPVIGAINGAAVTGGL 107
Query: 147 GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEM 205
            +++     +A     FA     +G  P  G S  L    G  L   ++LTG  L+ A+ 
Sbjct: 108 ELALYCDILIASENARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADA 167
Query: 206 MACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD 264
           +  GL T     ++L    + +   +V ++ + + A L  Y            HRID   
Sbjct: 168 LRAGLVTEVVPHDQLLGAAQAVAASIVGNNQNAVRALLASY------------HRIDDAQ 215
Query: 265 KCFGL 269
              GL
Sbjct: 216 TSAGL 220

>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2 Enoyl Coa Isomerase (Peci) Length = 280

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
            NRP   NA+NT    ++ +  KA   D +I  V + G+G  + +G D+ +       G 
Sbjct: 41  FNRPKKKNAINTEXYHEIXRALKAASKDDSIITV-LTGNGDYYSSGNDLTNFTDIPPGGV 99
Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRV--ACGKTVFATP 166
            E+ K+    L  F+       KP +A++NG  +  G  V++ G F    A  +  F TP
Sbjct: 100 EEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAV--GISVTLLGLFDAVYASDRATFHTP 157
Query: 167 ETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH 213
            + +G  P+  +S+    +  P    E L + G KL   E  A GL T 
Sbjct: 158 FSHLGQSPEGCSSYTFPKIXSPAKATEXL-IFGKKLTAGEACAQGLVTE 205

>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis. Length = 265

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 13/210 (6%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 107
           LNR    N+L+  +  +L  +      + N   V + G+G +AFCAG D+       N+ 
Sbjct: 24  LNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKE-RAGXNEE 82
Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
           ++       RT    +  L    +P +A +NG+ +GGG  +S+   FR+A         E
Sbjct: 83  QVRHAVSXIRTTXEXVEQLP---QPVIAAINGIALGGGTELSLACDFRIAAESASLGLTE 139
Query: 168 TLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATH----YSVSEKLPL 222
           T +   P AG +  L  L G    + L  TG +++  E    GL       + + EK   
Sbjct: 140 TTLAIIPGAGGTQRLPRLIGVGRAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIE 199
Query: 223 IEEELGKLVTDDPSVIEACLEKYSDLVYPD 252
           I E   K+ ++ P  +    E  S+ +  D
Sbjct: 200 IAE---KIASNGPIAVRLAKEAISNGIQVD 226

>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 265

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 8/165 (4%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+ PS  N+    +G +L   ++  ++DP +  + + G+  AFC+G  I +        +
Sbjct: 22  LHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPR 81
Query: 109 LEECKDFFRT-LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
                DF  + +    + L T   P +A +NG  +G G  +++    R+   +  +A P+
Sbjct: 82  ---NPDFSASPVQPAAFELRT---PVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQ 135
Query: 168 TLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLA 211
              G  PDA A + L  L G  +   L LTGA  +    +  GLA
Sbjct: 136 VRFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAVETGLA 180

>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5, Delta2,4-Dienoyl Coa Isomerase Length = 296

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 71/177 (40%), Gaps = 15/177 (8%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP+  NA+N     ++ + F     D +   V + G+G+ F AG D++ +   + Q K
Sbjct: 46  LNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPK 105
Query: 109 LEEC-------KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
            ++        +D          ++    KP +A ++G  +GGG  +      R      
Sbjct: 106 GDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDA 165
Query: 162 VFATPETLIGFHPDAGASFYLSHLPGHLGEF-----LALTGAKLNGAEMMACGLATH 213
            F   E  +G   D G    L  LP  +G       LA T  K+   E +  GL + 
Sbjct: 166 FFQVKEVDVGLAADVGT---LQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSR 219

>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 290

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/182 (26%), Positives = 76/182 (41%), Gaps = 9/182 (4%)
Query: 46  MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 105
           +  LNRP  +NA+  ++     ++     +D ++  V + G+G+ FC+G D  S     +
Sbjct: 36  LVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPH 95
Query: 106 QGKLEECKDFFRT---LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV 162
            G L +     R+   L   I  L    +P +A +NG  +GGG  +++    RVA     
Sbjct: 96  IGGLTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAY 155
Query: 163 FATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATHYSVSE 218
           F       G         YL  LP  +G   A    LTG  ++  E    GL +    SE
Sbjct: 156 FRAAGINNGLTASELGLSYL--LPRAIGTSRASDIMLTGRDVDADEAERIGLVSRKVASE 213
Query: 219 KL 220
            L
Sbjct: 214 SL 215

>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase Complex From E.coli Length = 274

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 9/193 (4%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP  LN+ N  M A+L +  K  E D  I  + + G+GR FCAG D+    +  N   
Sbjct: 30  LNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDL----NDRNVDP 85
Query: 109 LEECKDFFRTLYSFIYLLGTHL----KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 164
                D   ++  F   L   L    KP +  +NGV  G GA +++ G   +A     F 
Sbjct: 86  TGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFV 145
Query: 165 TPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPLI 223
              + +G  PD G ++ L  + G      LAL G +L+  +    G+       E L   
Sbjct: 146 MAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDETLADT 205
Query: 224 EEELGKLVTDDPS 236
            ++L + +   P+
Sbjct: 206 AQQLARHLATQPT 218

>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Anthracis Str. 'ames Ancestor' Length = 261

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 46  MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN 105
           +A LN   A NA ++ +   + +L    E D NI  V + G GR F AG DI        
Sbjct: 18  VATLNHAPA-NAXSSQVXHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTE 76
Query: 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 165
             +  E     +  +  +       KP +A ++G  +GGG   +     R A        
Sbjct: 77  AKQATELAQLGQVTFERVEKCS---KPVIAAIHGAALGGGLEFAXSCHXRFATESAKLGL 133
Query: 166 PETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 210
           PE  +G  P    +     LP ++G+  A    LT   + GAE +  GL
Sbjct: 134 PELTLGLIPGFAGT---QRLPRYVGKAKACEXXLTSTPITGAEALKWGL 179

>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 256

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/228 (24%), Positives = 88/228 (38%), Gaps = 27/228 (11%)
Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LV+     R   LNRP + NAL+  + +   +     +ND ++  V + G+   FCAG 
Sbjct: 11  LLVDTTDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGL 70
Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D+  L      G   E  D                KP +  +NG  + GG  +++     
Sbjct: 71  DLKEL------GDTTELPDISPKWPDMT-------KPVIGAINGAAVTGGLELALYCDIL 117
Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGLATHY 214
           +A     FA     +G  P  G S  L    G  L   ++LTG  L+  + +  GL T  
Sbjct: 118 IASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEV 177
Query: 215 SVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID 261
              + L      +   +V ++   + A L+ Y            HRID
Sbjct: 178 VAHDDLLTAARRVAASIVGNNQKAVRALLDSY------------HRID 213

>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From Mycobacterium Marinum Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 75/195 (38%), Gaps = 24/195 (12%)
Query: 27  SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86
           S+  DL   V VE        I+NRP A NA+N    A L   F  ++ D +     + G
Sbjct: 4   SMVSDL---VQVERNGPVTTVIINRPQARNAVNGPTAAALYSAFAEFDRDESASVAVLCG 60
Query: 87  SGRAFCAGGDIVSL-------YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG 139
           +G  FCAG D+ +         H    G +   +                 KP +A ++G
Sbjct: 61  NGGTFCAGADLKAFGTAEANAVHRTGPGPMGPSRMMLS-------------KPVIAAVSG 107
Query: 140 VTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGA 198
             + GG  +++    RVA    VF       G     G +  L  L GH     + LTG 
Sbjct: 108 YAVAGGLELALWCDLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGR 167
Query: 199 KLNGAEMMACGLATH 213
            +   E +A GLA  
Sbjct: 168 AVQADEALAIGLANR 182

>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase Length = 275

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 15/177 (8%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ-- 106
           LNRP   NA+N     +L + F+    D +   V + G+G+ F +G D++ +   + Q  
Sbjct: 19  LNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPP 78
Query: 107 -GKLEECKDFFRTLYSFIYLLGTHL----KPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
              +     + R L S      T +    KP +A ++G  +GGG  +      R      
Sbjct: 79  GDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDA 138
Query: 162 VFATPETLIGFHPDAGASFYLSHLPGHLGEF-----LALTGAKLNGAEMMACGLATH 213
            F   E  +G   D G    L  LP  +G       L  T  K+   E +  GL + 
Sbjct: 139 FFQVKEVDVGLAADVGT---LQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSR 192

>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus Halodurans Length = 263

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA-FCAGGDIVSLYHFMNQG 107
           L+ P   N L+  +G  L +  +A  N+ +I  + ++   RA F +G  +  L    +  
Sbjct: 19  LDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQ 78
Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
                ++    L   +  + T  K  VA++NG   GGG  + +    R+A  +  F    
Sbjct: 79  SDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENF 138
Query: 168 TLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGL 210
             +G  PD GAS++L  + G+     L L G      E +  GL
Sbjct: 139 HKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSEEALRLGL 182

>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium Smegm Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP A NAL+  M A L + F     D ++  V +  SG+AFCAG       H + + +
Sbjct: 41  LNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAG-------HDLKEMR 93
Query: 109 LEECKDFFRTLYS----FIYLLGTHLKPHVAILNGVTMGGG 145
            E  ++++  L++     +  +     P +A ++G+    G
Sbjct: 94  AEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAAG 134

>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 16/194 (8%)
Query: 52  PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111
           P   NAL+     ++       E D ++G V + G+  AFCAG        ++ +  L++
Sbjct: 21  PRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAG-------FYLREIPLDK 73
Query: 112 ----CKDFFRT----LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
                +D FR      +  I+ +    +P +A +NGV  GGG G+S+     +      F
Sbjct: 74  GVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKF 133
Query: 164 ATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPL 222
                 IG   D   S+ L+ + G      L LT   L   E    GL +     ++   
Sbjct: 134 VCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFRE 193
Query: 223 IEEELGKLVTDDPS 236
           +  ++ + +   P+
Sbjct: 194 VAWKVARELAAAPT 207

>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From Mycobacterium Avium Length = 267

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 78/189 (41%), Gaps = 12/189 (6%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LN P   NAL+T + ++L++  +   +DP +  V +  +G  FCAG D   L    + G 
Sbjct: 26  LNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGAD---LSEAGSGGS 82
Query: 109 LEECKDF----FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 164
                D      R + + +  +     P +A ++G    GG G+       VA  ++ FA
Sbjct: 83  PSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFA 142
Query: 165 TPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE 224
             E  IG  P   +   L  L         LTG K +       GL T    +E L   +
Sbjct: 143 LTEARIGVAPAIISLTLLPKLSARAAARYYLTGEKFDARRAEEIGLITM--AAEDL---D 197
Query: 225 EELGKLVTD 233
             + +LVTD
Sbjct: 198 AAIDQLVTD 206

>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas Sp. Strain Cbs-3 Length = 269

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 78/194 (40%), Gaps = 16/194 (8%)
Query: 52  PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111
           P   NAL+     ++       E D ++G V + G+  AFCAG        ++ +  L++
Sbjct: 21  PRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAG-------FYLREIPLDK 73
Query: 112 ----CKDFFRT----LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
                +D FR      +  I+ +    +P +A +NGV  GGG G+S+     +      F
Sbjct: 74  GVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKF 133
Query: 164 ATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPL 222
                 IG   D   S+ L+ + G      L LT   L   E    GL +     ++   
Sbjct: 134 VCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTDRTLYPEEAKDWGLVSRVYPKDEFRE 193
Query: 223 IEEELGKLVTDDPS 236
           +  ++ + +   P+
Sbjct: 194 VAWKVARELAAAPT 207

>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus 1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In Complex With Acetoacetyl Coa Length = 273

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQG 107
           +NRP   NA      A++   F    +D N+  + + G G  AFC+GGD     H    G
Sbjct: 28  INRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVG 87
Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
           + +  +     L   I ++    KP +A++ G  +GGG  +++     +A    +F    
Sbjct: 88  EDQIPRLNVLDLQRLIRIIP---KPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTG 144
Query: 168 TLIGFHPDAGASFYLSHLPGH 188
             +G       S YL+ + GH
Sbjct: 145 PKVGSFDAGYGSGYLARIVGH 165

>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Mycobacterium Tuberculosis Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 38/245 (15%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L RP   NALN+ +  +L +  +    D +   + + G G AFCAG D+ S   F     
Sbjct: 36  LQRPERRNALNSQLVEELTQAIRK-AGDGSARAIVLTGQGTAFCAGADL-SGDAF----- 88
Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
                D+   L      +     P V  +NG  +G G  +++    RV      F  P +
Sbjct: 89  ---AADYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTS 145
Query: 169 LIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATHY-----------SV 216
             G   D  +   LS L GH     + L+  KL     +  G+A               +
Sbjct: 146 KYGLALDNWSIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGTLADAQAWAAEI 205
Query: 217 SEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG-LDTVEEI 275
           +   PL  +   +++ DD ++ EA         +P      H+ ++ DK +G  D +E  
Sbjct: 206 ARLAPLAIQHAKRVLNDDGAIEEA---------WP-----AHK-ELFDKAWGSQDVIEAQ 250
Query: 276 IDSLE 280
           +  +E
Sbjct: 251 VARME 255

>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A (Product) Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 16/194 (8%)
Query: 52  PSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE 111
           P   NAL+     ++       E D ++G V + G+  AFCAG        ++ +  L++
Sbjct: 21  PRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAG-------FYLREIPLDK 73
Query: 112 ----CKDFFRT----LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
                +D FR         I+ +    +P +A +NGV  GGG G+S+     +      F
Sbjct: 74  GVAGVRDHFRIAALWWQQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKF 133
Query: 164 ATPETLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATHYSVSEKLPL 222
                 IG   D   S+ L+ + G      L LT   L   E    GL +     ++   
Sbjct: 134 VCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFRE 193
Query: 223 IEEELGKLVTDDPS 236
           +  ++ + +   P+
Sbjct: 194 VAWKVARELAAAPT 207

>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa HydrataseISOMERASE FROM Acinetobacter Baumannii Length = 266

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 9/166 (5%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFM---N 105
           +NRP A NAL   +   + K     + + ++  V ++G+   F AG D+     F+   N
Sbjct: 20  INRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79
Query: 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 165
            G   +   F   L S   L     KP +  + GV +G G  + +      A    +F  
Sbjct: 80  AGPAGQVPPFV-LLKSAARL----SKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQI 134
Query: 166 PETLIGFHPDAGASFYLSHLPG-HLGEFLALTGAKLNGAEMMACGL 210
           P   +G  P+ GAS  L    G H    L  T  K N    +  GL
Sbjct: 135 PFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGL 180

>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase (Gk2873) From Geobacillus Kaustophilus Hta426 Length = 272

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 107
           +NRP   NA       ++   F    +D NIG + + G+G +AFC+GGD     H    G
Sbjct: 27  INRPEVHNAFRPKTVNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGDQKVRGHGGYVG 86
Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
           + E  +     L   I ++    KP +A++ G  +GGG  + +     +A    +F    
Sbjct: 87  EDEIPRLNVLDLQRLIRVIP---KPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTG 143
Query: 168 TLIGFHPDAGASFYLSHLPGH 188
             +G       + YL+ + GH
Sbjct: 144 PKVGSFDGGYGAGYLARIVGH 164

>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM Mycobacterium Abscessus Length = 256

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 69/167 (41%), Gaps = 11/167 (6%)
Query: 32  LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAF 91
           + ++VL+E +    +  +NRP A NA+N  +   L       ++  ++    + G+G  F
Sbjct: 5   MADEVLIEQRDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNF 64
Query: 92  CAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIP 151
           CAG D+ +      +  L E    F  +           KP +A + G  + GG  + + 
Sbjct: 65  CAGMDLKAFVS--GEAVLSERGLGFTNV--------PPRKPIIAAVEGFALAGGTELVLS 114
Query: 152 GTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHLGEFLALTG 197
               VA     F  PE   G    AG    L + +P  +   LALTG
Sbjct: 115 CDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTG 161

>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Rhodopseudomonas Palustris Cga009 Length = 275

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 65/167 (38%), Gaps = 9/167 (5%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP   NALN  + A L        +   I  V + G G  F AG D+  L        
Sbjct: 31  LNRPKKRNALNDGLMAALKDCLTDIPD--QIRAVVIHGIGDHFSAGLDLSELRERDATEG 88
Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
           L   + + R      Y       P +A L G  +GGG  ++     RVA     +A PE 
Sbjct: 89  LVHSQTWHRVFDKIQYCR----VPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEG 144
Query: 169 LIGFHPDAGASFYLSHLPG--HLGEFLALTGAKLNGAEMMACGLATH 213
             G     G S  L  L G   + + + LTG   + AE +  G + +
Sbjct: 145 SRGIFVGGGGSVRLPRLIGVARMADMM-LTGRVYSAAEGVVHGFSQY 190

>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From Mycobacterium Smegmatis Length = 282

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 77/202 (38%), Gaps = 11/202 (5%)
Query: 40  GKANSRMAI-LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIV 98
           G A+S   I LNRP A NA N  +  +L+  +     D  +  + ++ +G+ F AG D+ 
Sbjct: 28  GVADSIATITLNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLR 87
Query: 99  SLYHFMNQGKLE-ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVA 157
                  +  LE   +   R    +        KP +A + G  + GG  +  P    +A
Sbjct: 88  GGGEVPEKISLEFIIQHEARRYLDYTLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLILA 147
Query: 158 CGKTVFATPETLIGFHPDAGASFYLSHL----PGHLGEFLALTGAKLNGAEMMACGLATH 213
               +F+ P  L+G     G   Y  H     P    E L  TG  L   E    G+   
Sbjct: 148 SDDALFSDPVALMGI----GGVEYHGHTWELGPRKAKEIL-FTGRALTAEEAERTGMVNR 202
Query: 214 YSVSEKLPLIEEELGKLVTDDP 235
               ++L     EL + +   P
Sbjct: 203 VVARDELDAQTRELAEQIATMP 224

>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From Mycobacterium Thermoresistibile Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 20/197 (10%)
Query: 35  QVLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFC 92
           ++ ++   + R+A   LNRP A NA N  +  +L+  +     D ++  + ++ +G+ F 
Sbjct: 19  EMYIDYDVSDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFS 78
Query: 93  AGGDIVSLYHFMNQGKLE-----ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAG 147
           AG D+       ++  LE     E + +    YS  +      KP +A + G  + GG  
Sbjct: 79  AGHDLRGGGPVPDKLTLEFIYAHESRRYLE--YSLRWR--NVPKPSIAAVQGRCISGGLL 134
Query: 148 VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL----PGHLGEFLALTGAKLNGA 203
           +  P    +A    +F+ P  L+    D G   Y  H     P    E L  TG  +   
Sbjct: 135 LCWPCDLIIAAEDALFSDPVVLM----DIGGVEYHGHTWELGPRKAKEIL-FTGRAMTAE 189
Query: 204 EMMACGLATHYSVSEKL 220
           E+   G+       ++L
Sbjct: 190 EVAQTGMVNRVVPRDRL 206

>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From Streptomyces Coelicolor A3(2) Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 79/195 (40%), Gaps = 4/195 (2%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L RP  LNAL     A L  L         +  + + G GR FC+GGD+  +        
Sbjct: 32  LARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSXD 91
Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
                DF R     +  +     P +A L+GV  G GA +++   FRVA   T FA   T
Sbjct: 92  TARLLDFNRXTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFT 151
Query: 169 LIGFH-PDAGASFYLSHLP--GHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE 225
            +G    D GA++ L  +   GH    L L G  +   E    GL +  +   +      
Sbjct: 152 RVGLSGGDXGAAYLLPRVVGLGHATRLLXL-GDTVRAPEAERIGLISELTEEGRADEAAR 210
Query: 226 ELGKLVTDDPSVIEA 240
            L + + D P++  A
Sbjct: 211 TLARRLADGPALAHA 225

>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From Mycobacterium Marinum Length = 265

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 75/189 (39%), Gaps = 16/189 (8%)
Query: 26  SSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMK 85
           S +  D   +VLVE +    +  +NRP A N++N  +   L       + D  +    + 
Sbjct: 7   SELNGDTEPEVLVEQRDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILT 66
Query: 86  GSGRAFCAGGDIVSLYHFMN---QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142
           G+G +FCAG D+ +     N   +G+               +      KP +A + G  +
Sbjct: 67  GAGGSFCAGMDLKAFARGENVVVEGR------------GLGFTERPPAKPLIAAVEGYAL 114
Query: 143 GGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYL-SHLPGHLGEFLALTGAKLN 201
            GG  +++     VA   + F  PE   G     G    L   +P  +   LALTG  L+
Sbjct: 115 AGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLS 174
Query: 202 GAEMMACGL 210
                A G+
Sbjct: 175 AERAHALGM 183

>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase Domain-Containing Protein 3 (Echdc3) Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 7/168 (4%)
Query: 45  RMAILNRPSALNALNTNMGAKLNK--LFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYH 102
           R  +L+ P   N L+  M   L    L  A  ND  +  +S +G    F +G D+  L  
Sbjct: 44  RNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGP--VFSSGHDLKELTE 101
Query: 103 FMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV 162
              QG+ +   + F+T    +  +  H  P +A++NG+    G  +       VA  K+ 
Sbjct: 102 --EQGR-DYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSS 158
Query: 163 FATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGL 210
           FATP   +G             +P  +   +  TG  ++  E +  GL
Sbjct: 159 FATPGVNVGLFCSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGL 206

>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE (Crotonase) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           +NR S  NA +  +  ++     +  ND N+  + +K +G+ F AG D+  +    N  +
Sbjct: 19  MNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTE 78
Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            E  +D    L + +Y +    KP +A++ G   GGGAG++      +A     F   E 
Sbjct: 79  EENLEDSL-VLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEV 137
Query: 169 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATH 213
            +G  P   + + +  +     + L ++    +     +  L  H
Sbjct: 138 KLGLIPAVISPYVVRAIGERAAKMLFMSAEVFDATRAYSLNLVQH 182

>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From Mycobacterium Marinum In Complex With An Unknown Ligand Length = 272

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 9/178 (5%)
Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ- 106
           +L+ P  LN++   M   L  ++   + DP++  V ++G G+AF +GG     +  +++ 
Sbjct: 28  VLDSP-GLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGS----FELIDET 82
Query: 107 -GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 165
            G  E      R     +  L    KP V+ + G  +G G  V++     VA        
Sbjct: 83  IGDYEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIID 142
Query: 166 PETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGL-ATHYSVSEKLP 221
             T +G      A+     L G    ++  LT   L+G E    GL +T     E LP
Sbjct: 143 GHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLSGEEAERIGLVSTCVDDDEVLP 200

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	350
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	1e-123
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	1e-117
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	3e-31
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	7e-31
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	8e-31
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	2e-30
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	4e-30
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	5e-30
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 11251J, struct	6e-30
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	8e-30
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	4e-29
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	4e-29
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	6e-29
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	6e-29
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	7e-29
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	1e-28
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	1e-28
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	2e-27
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	3e-27
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	1e-26
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	5e-26
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	1e-25
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	1e-25
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	2e-25
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	3e-25
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	6e-25
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	8e-25
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	8e-25
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	1e-24
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	2e-24
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	2e-24
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	3e-24
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	5e-24
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	6e-24
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	7e-24
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	1e-23
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	1e-23
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	1e-23
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	2e-23
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	3e-23
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	3e-23
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	5e-23
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	9e-23
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	1e-22
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	1e-22
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	2e-22
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	2e-22
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	3e-22
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	3e-22
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	7e-22
3t3w_A	279	Probable enoyl-COA hydratase; ssgcid, structural g	1e-21
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	2e-21
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	3e-21
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	3e-21
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	5e-21
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	1e-20
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	2e-20
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	2e-20
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	7e-20
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	2e-19
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	2e-19
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	4e-19
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	8e-19
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	8e-19
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	1e-18
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	3e-18
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	6e-18
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	1e-17
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	2e-17
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	8e-15
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	2e-14
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	2e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	1e-11

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens} Length = 363

 Score =  359 bits (923), Expect = e-123
 Identities = 113/290 (38%), Positives = 167/290 (57%), Gaps = 9/290 (3%)

Query: 31  DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-R 89
           D   +VL+  K  + +  LNRP  LNAL  NM  ++    K WE DP    + +KG+G +
Sbjct: 3   DAAEEVLLGKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGK 62

Query: 90  AFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVS 149
           AFCAGGDI  +       + +    FFR  Y     +G+  KP+VA+++G+TMGGG G+S
Sbjct: 63  AFCAGGDIRVISEAEKAKQ-KIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLS 121

Query: 150 IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACG 209
           + G FRVA  K +FA PET IG  PD G  ++L  L G LG FLALTG +L G ++   G
Sbjct: 122 VHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAG 181

Query: 210 LATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNS---VIHRIDIVDKC 266
           +ATH+  SEKL ++EE+L  L +     I + LE Y      D++    +   +D ++ C
Sbjct: 182 IATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSC 241

Query: 267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREG 316
           F  +TVEEII++L+ +       +    L+++ + SP SLK++LR + EG
Sbjct: 242 FSANTVEEIIENLQQDG----SSFALEQLKVINKMSPTSLKITLRQLMEG 287

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis} Length = 407

 Score =  344 bits (885), Expect = e-117
 Identities = 88/313 (28%), Positives = 146/313 (46%), Gaps = 15/313 (4%)

Query: 16  LRALSQHRTSSSVTDDLCNQVLVEGKANS-RMAILNRPSALNALNTNMGAKLNKLFKAWE 74
           +  L      S  T ++  Q L         +  LN   ALNAL+ +M   +      W+
Sbjct: 23  MTNLVDKAAHSFATQNVVFQTLATASGKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWK 82

Query: 75  NDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK---LEECKDFFRTLYSFIYLLGTHL 130
            DP I  V + GSG +AFCAGGD+ +LYH     K    E  K FF   Y   YLL T+ 
Sbjct: 83  KDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQVTEVAKVFFEEEYRLDYLLHTYG 142

Query: 131 KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLG 190
           KP +   +G+ MGGG G+    + +V    +  A PE  IG +PD G S++L+ +PG +G
Sbjct: 143 KPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPGKMG 202

Query: 191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDP-----SVIEACLEKY 245
            FL LT   +N A+    GLA HY   +   L+ + +  L   D        ++  + + 
Sbjct: 203 LFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINEL 262

Query: 246 S-DLVYPDKNSVI-HRIDIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASP 303
           S  +  P  +SV+    +++D+     ++ +I+  + + ++  ++ W       +   SP
Sbjct: 263 SNQVDIPKGDSVLAESQEMIDRLMA-GSLTDIVTRMSTLST--DEAWLSKACATMLAGSP 319

Query: 304 LSLKVSLRSIREG 316
           +S  ++    + G
Sbjct: 320 ISWHLAYIQTQLG 332

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus} Length = 257

 Score =  116 bits (293), Expect = 7e-31
 Identities = 60/168 (35%), Positives = 82/168 (48%), Gaps = 10/168 (5%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP  LNA    M A++ K  K    DPN+  V + G+GRAFCAG D+  +   M+ G 
Sbjct: 18  LNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHGD 77

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
           +      +  +   ++ L    KP VA +NG   G G  +++   FR+   K  FA    
Sbjct: 78  VLR--SRYAPMMKALHHLE---KPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFI 132

Query: 169 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 213
            +G  PDAG  +YL  L G    L   LA+ G K+   E  A GLAT 
Sbjct: 133 HVGLVPDAGHLYYLPRLVGRAKALE--LAVLGEKVTAEEAAALGLATK 178

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B* Length = 269

 Score =  116 bits (294), Expect = 8e-31
 Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 12/171 (7%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           +  P   NAL+     ++       E D ++G V + G+  AFCAG  +           
Sbjct: 18  IKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLRE---IPLDKG 74

Query: 109 LEECKDFFRTLYSFIYLLGTHL----KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA 164
           +   +D FR    + + +   +    +P +A +NGV  GGG G+S+     +      F 
Sbjct: 75  VAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFV 134

Query: 165 TPETLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLAT 212
                IG   D   S+ L+ + G    +   L LT   L   E    GL +
Sbjct: 135 CAWHTIGIGNDTATSYSLARIVGMRRAME--LMLTNRTLYPEEAKDWGLVS 183

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A Length = 280

 Score =  116 bits (292), Expect = 2e-30
 Identities = 34/196 (17%), Positives = 57/196 (29%), Gaps = 13/196 (6%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L  P  LNAL       L +L +  + + ++ F  ++ SGR F +G D   +        
Sbjct: 24  LINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDT 83

Query: 109 LEECKD-------FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
            +   +       F             H K  +  LNG  +G  A +        +    
Sbjct: 84  NKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDK 143

Query: 162 V-FATPETLIGFHPDAGASFYLSHLPGHL--GEFLALTGAKLNGAEMMACGLATHYSVSE 218
           V    P   +G   + G +  L    G     E   +         M   G  +      
Sbjct: 144 VYLLYPFANLGLITEGGTTVSLPLKFGTNTTYE-CLMFNKPFKYDIMCENGFISK--NFN 200

Query: 219 KLPLIEEELGKLVTDD 234
                 E     V ++
Sbjct: 201 MPSSNAEAFNAKVLEE 216

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium} Length = 255

 Score =  114 bits (288), Expect = 4e-30
 Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+RP  LNA++T M  +L+   +  E D ++  V + G+GRAFC+GGD+         G 
Sbjct: 21  LDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTG---GDTAGA 77

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            +      R + S         KP +A ++G  +G G  +++     VA   + F    T
Sbjct: 78  ADAANRVVRAITSL-------PKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFT 130

Query: 169 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 213
            +G  PD GAS  L  L G        +A+T  K++ A     G+ +H
Sbjct: 131 RVGLMPDGGASALLPLLIGRARTSR--MAMTAEKISAATAFEWGMISH 176

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum} Length = 256

 Score =  114 bits (288), Expect = 5e-30
 Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 8/168 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP ALNA N  +     +      +DP +  V + GSGR F AG D+        +  
Sbjct: 21  LNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAE---MQARIT 77

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
                +        I  L    KP +  +NG+ +G GA +                 P T
Sbjct: 78  DPNFSEGKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFT 137

Query: 169 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 213
            +G  P+A +S+ L  L G        L ++   ++  E +  GL   
Sbjct: 138 SLGVAPEAASSYLLPQLVGRQNAAW--LLMSSEWIDAEEALRMGLVWR 183

>3lke_A Enoyl-COA hydratase; nysgrc, target 11251J, structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans} Length = 263

 Score =  114 bits (287), Expect = 6e-30
 Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRA-FCAGGDIVSLYHFMNQG 107
           L+ P   N L+  +G  L +  +A  N+ +I  + ++   RA F +G  +  L    +  
Sbjct: 19  LDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQ 78

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
                ++    L   +  + T  K  VA++NG   GGG  + +    R+A  +  F    
Sbjct: 79  SDVRLREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENF 138

Query: 168 TLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 213
             +G  PD GAS++L  + G+   +   L L G      E +  GL   
Sbjct: 139 HKMGISPDLGASYFLPRIIGYEQTMN--LLLEGKLFTSEEALRLGLIQE 185

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3 Length = 280

 Score =  114 bits (287), Expect = 8e-30
 Identities = 44/167 (26%), Positives = 72/167 (43%), Gaps = 4/167 (2%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
            NRP   NA+NT M  ++ +  KA   D +I  V + G+G  + +G D+ +       G 
Sbjct: 41  FNRPKKKNAINTEMYHEIMRALKAASKDDSIITV-LTGNGDYYSSGNDLTNFTDIPPGGV 99

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            E+ K+    L  F+       KP +A++NG  +G    +        A  +  F TP +
Sbjct: 100 EEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFS 159

Query: 169 LIGFHPDAGASFYLSHLPGHL--GEFLALTGAKLNGAEMMACGLATH 213
            +G  P+  +S+    +       E + + G KL   E  A GL T 
Sbjct: 160 HLGQSPEGCSSYTFPKIMSPAKATE-MLIFGKKLTAGEACAQGLVTE 205

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A Length = 243

 Score =  111 bits (280), Expect = 4e-29
 Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 20/171 (11%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           +   S+ N  + ++   L   F     +     V + G G  F +G        F+ +  
Sbjct: 18  MKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASK----EFLIRKT 73

Query: 109 LEECK--DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 166
             E +  D    +            P +A + G + GGG  + +   F V   ++V+AT 
Sbjct: 74  RGEVEVLDLSGLILDC-------EIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATN 126

Query: 167 ETLIGFHPDAGASFYLSHLPGHLGEF----LALTGAKLNGAEMMACGLATH 213
               GF P    S  L      LG      +  TG    G E+   G+   
Sbjct: 127 FMKYGFTPVGATSLILREK---LGSELAQEMIYTGENYRGKELAERGIPFP 174

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii} Length = 266

 Score =  112 bits (282), Expect = 4e-29
 Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 5/167 (2%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           +NRP A NAL   +   + K     + + ++  V ++G+   F AG D+     FM   +
Sbjct: 20  INRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKD---FMGFVQ 76

Query: 109 LEECKDFFRTLY-SFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
                   +      +       KP +  + GV +G G  + +      A    +F  P 
Sbjct: 77  NPNAGPAGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPF 136

Query: 168 TLIGFHPDAGASFYLSHLPGHLGEF-LALTGAKLNGAEMMACGLATH 213
             +G  P+ GAS  L    G+     L  T  K N    +  GL   
Sbjct: 137 VSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNE 183

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3} Length = 279

 Score =  111 bits (281), Expect = 6e-29
 Identities = 48/169 (28%), Positives = 68/169 (40%), Gaps = 6/169 (3%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L RP  LNAL     A L  L         +  + + G GR FC+GGD+  +        
Sbjct: 32  LARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMD 91

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
                DF R     +  +     P +A L+GV  G GA +++   FRVA   T FA   T
Sbjct: 92  TARLLDFNRMTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFT 151

Query: 169 LIGFHP-DAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 213
            +G    D GA++ L  + G        L + G  +   E    GL + 
Sbjct: 152 RVGLSGGDMGAAYLLPRVVGLGHATR--LLMLGDTVRAPEAERIGLISE 198

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3 Length = 291

 Score =  112 bits (282), Expect = 6e-29
 Identities = 45/182 (24%), Positives = 69/182 (37%), Gaps = 7/182 (3%)

Query: 36  VLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           ++V+ K +    I    R +  NALNT +  ++     +   D     V    +G  FC 
Sbjct: 25  IVVK-KEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADD-SKLVLFSAAGSVFCC 82

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           G D       +   +     +   T+ +F+       KP V  +NG  +G GA +     
Sbjct: 83  GLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCD 142

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL--GEFLALTGAKLNGAEMMACGLA 211
              A  K  F TP T  G  PD  +S     + G     E + + G KL   E  A GL 
Sbjct: 143 LVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASANE-MLIAGRKLTAREACAKGLV 201

Query: 212 TH 213
           + 
Sbjct: 202 SQ 203

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A Length = 261

 Score =  111 bits (280), Expect = 7e-29
 Identities = 40/183 (21%), Positives = 65/183 (35%), Gaps = 9/183 (4%)

Query: 36  VLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           ++V  K +    I    + S  N+LN  +  ++         D     V +   G  FC 
Sbjct: 7   IVVR-KQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCC 64

Query: 94  GGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGT 153
           G D +     +   +  E       + +F+       KP +  +NG  +G GA +     
Sbjct: 65  GLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCD 124

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGL 210
              A  K  F TP T  G  PD  ++     + G        + L+G KL   E    GL
Sbjct: 125 VVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANE--MLLSGRKLTAQEACGKGL 182

Query: 211 ATH 213
            + 
Sbjct: 183 VSQ 185

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp} Length = 276

 Score =  111 bits (279), Expect = 1e-28
 Identities = 47/205 (22%), Positives = 78/205 (38%), Gaps = 11/205 (5%)

Query: 20  SQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNI 79
           +Q +   S+  D+  ++ V      R+  LNRP +LN++N ++   L +L++   +DP  
Sbjct: 14  AQTQGPGSMVYDMPTEIDVRADGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTA 73

Query: 80  GFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL-KPHVAILN 138
               + G+GRAF AGGD     +        + +         I L       P VA +N
Sbjct: 74  RAAVITGAGRAFSAGGDFG---YLKELSADADLRAKTIRDGREIVLGMARCRIPVVAAVN 130

Query: 139 GVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH---LGEFLAL 195
           G  +G G  +               A P   +G     G                   AL
Sbjct: 131 GPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKE--YAL 188

Query: 196 TGAKLNGAEMMACGLATHYSVSEKL 220
           TG +++    +  GLA H  V++  
Sbjct: 189 TGTRISAQRAVELGLANH--VADDP 211

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M} Length = 298

 Score =  111 bits (280), Expect = 1e-28
 Identities = 48/186 (25%), Positives = 64/186 (34%), Gaps = 10/186 (5%)

Query: 36  VLVEGKANSRMAI-LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAG 94
           VL E        I  NR   LNA   ++ A         E DP I  + + G GR FCAG
Sbjct: 31  VLYEATPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAG 90

Query: 95  GDIVSLYHFMNQGKL---EECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSI 150
             + S        K     +  +    +        T L KP +A +NG  +G G   ++
Sbjct: 91  AYLGSADAAAGYDKTMAKAKDANLADLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQAL 150

Query: 151 PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMA 207
               R A     FA      G   + G S+ L  L      L   L L+G      E   
Sbjct: 151 MCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALD--LLLSGRTFLAEEAAQ 208

Query: 208 CGLATH 213
            GL   
Sbjct: 209 LGLVKE 214

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} PDB: 3q1t_A Length = 272

 Score =  108 bits (271), Expect = 2e-27
 Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 8/168 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+ P  LN++   M   L  ++   + DP++  V ++G G+AF +GG    +      G 
Sbjct: 29  LDSP-GLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDE--TIGD 85

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            E      R     +  L    KP V+ + G  +G G  V++     VA          T
Sbjct: 86  YEGRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHT 145

Query: 169 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 213
            +G      A+     L G          LT   L+G E    GL + 
Sbjct: 146 KLGVAAGDHAAICWPLLVGMAKAKY--YLLTCETLSGEEAERIGLVST 191

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} Length = 265

 Score =  106 bits (268), Expect = 3e-27
 Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+ PS  N+    +G +L   ++  ++DP +  + + G+  AFC+G  I +        +
Sbjct: 22  LHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPR 81

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
             +       +    + L     P +A +NG  +G G  +++    R+   +  +A P+ 
Sbjct: 82  NPD--FSASPVQPAAFELR---TPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQV 136

Query: 169 LIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLATH 213
             G  PDA A + L  L G        L LTGA  +    +  GLA  
Sbjct: 137 RFGVAPDALAHWTLPRLVGTAVAAE--LLLTGASFSAQRAVETGLANR 182

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3 Length = 264

 Score =  105 bits (265), Expect = 1e-26
 Identities = 34/181 (18%), Positives = 55/181 (30%), Gaps = 7/181 (3%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +         + I  R   LNA+   +   L ++++  E    +  V ++G G  F AGG
Sbjct: 12  LAFAWPRPGVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGG 71

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
               +     +   E     F      +       +P VA +  V +G G  +++     
Sbjct: 72  SFGLIEEM--RASHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIA 129

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGLAT 212
           V    T        +G      A      L G          L    L G E    GL  
Sbjct: 130 VVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAKY--HLLLNEPLTGEEAERLGLVA 187

Query: 213 H 213
            
Sbjct: 188 L 188

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis} Length = 267

 Score =  103 bits (260), Expect = 5e-26
 Identities = 41/197 (20%), Positives = 68/197 (34%), Gaps = 12/197 (6%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
            +RP A N +N  +  +  ++    E    +  V ++G    FC G D   +Y  M +G 
Sbjct: 22  FHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRG- 79

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
             +       LY     L T     ++ + G    GG G        +A     F+  E 
Sbjct: 80  -RKQASSQEPLYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSEL 138

Query: 169 LIGFHPDAGASFYLSHLPGHLGEF----LALTGAKLNGAEMMACGLATHYSVSEKLPLIE 224
           L G +P     F    L   +G      + L    ++  E    GL      +E   L+ 
Sbjct: 139 LFGLYPACVLPF----LIRRIGRQKAHYMTLMTKPISVQEASEWGLI-DAFDAESDVLLR 193

Query: 225 EELGKLVTDDPSVIEAC 241
           + L +L   +   I   
Sbjct: 194 KHLLRLRRLNKKGIAHY 210

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus} Length = 290

 Score =  103 bits (259), Expect = 1e-25
 Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 9/169 (5%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSL--YHFMNQ 106
           LNRP  +NA+  ++     ++     +D ++  V + G+G+ FC+G D  S      +  
Sbjct: 39  LNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGG 98

Query: 107 GKLEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT 165
                       L   + L    + +P +A +NG  +GGG  +++    RVA     F  
Sbjct: 99  LTQPTIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRA 158

Query: 166 PETLIGFHP-DAGASFYLSHLPGH---LGEFLALTGAKLNGAEMMACGL 210
                G    + G S+ L    G        + LTG  ++  E    GL
Sbjct: 159 AGINNGLTASELGLSYLLPRAIGTSRASD--IMLTGRDVDADEAERIGL 205

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A* Length = 250

 Score =  102 bits (256), Expect = 1e-25
 Identities = 37/183 (20%), Positives = 61/183 (33%), Gaps = 12/183 (6%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAG 94
           V  E     R+  L+ P+  N  +  +   +         D ++  V + G   R+F AG
Sbjct: 2   VFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAG 61

Query: 95  GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           GD   +        +EE  D    LY  +  +    KP +A ++G  +G G   ++    
Sbjct: 62  GDFNEVKQLSRSEDIEEWIDRVIDLYQAVLNVN---KPTIAAVDGYAIGMGFQFALMFDQ 118

Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 210
           R+      F  PE   G     GA+     L    G             L+    +   L
Sbjct: 119 RLMASTANFVMPELKHGIGCSVGAAI----LGFTHGFSTMQEIIYQCQSLDAPRCVDYRL 174

Query: 211 ATH 213
              
Sbjct: 175 VNQ 177

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A Length = 256

 Score =  101 bits (255), Expect = 2e-25
 Identities = 44/182 (24%), Positives = 74/182 (40%), Gaps = 20/182 (10%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LV+     R   LNRP + NAL+  + +   +     +ND ++  V + G+   FCAG 
Sbjct: 11  LLVDTTDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGL 70

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D+       +  +L +    +  +           KP +  +NG  + GG  +++     
Sbjct: 71  DLKE---LGDTTELPDISPKWPDMT----------KPVIGAINGAAVTGGLELALYCDIL 117

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLA 211
           +A     FA     +G  P  G S  L      +G  LA    LTG  L+  + +  GL 
Sbjct: 118 IASENAKFADTHARVGLMPTWGLSVRLPQK---VGVGLARRMSLTGDYLSAQDALRAGLV 174

Query: 212 TH 213
           T 
Sbjct: 175 TE 176

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A Length = 257

 Score =  101 bits (254), Expect = 3e-25
 Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 7/167 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           ++         +    +L   F     D     V + G+G +FC   D  S     N G 
Sbjct: 31  VHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTS----FNLGT 86

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA-TPE 167
             +  +        +  L +   P +A +NG  +     + +     +A     F   P 
Sbjct: 87  PHDWDEIIFEGQRLLNNLLSIEVPVIAAVNGP-VTNAPEIPVMSDIVLAAESATFQDGPH 145

Query: 168 TLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 213
              G  P  GA     H+ G   G +  LTG +L+    +  G    
Sbjct: 146 FPSGIVPGDGAHVVWPHVLGSNRGRYFLLTGQELDARTALDYGAVNE 192

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus} Length = 265

 Score =  100 bits (252), Expect = 6e-25
 Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 10/169 (5%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP+  NA +  M  +L      +E D ++    + G G  F AG D+ S+   +  G 
Sbjct: 24  LNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGA 83

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
               +            L    KP +  ++G  +  G  +++     +A     FA  E 
Sbjct: 84  SLTPEGGINPWQVDGRQLS---KPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEV 140

Query: 169 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 213
             G +P  GA+      P   G   A    LT    +  E    G+   
Sbjct: 141 NRGIYPFGGATI---RFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQE 186

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C* Length = 276

 Score =  100 bits (252), Expect = 8e-25
 Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 9/194 (4%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V VE +      ILNRP   NA++  +  ++  + +  E DP  G + + G+G A+ AG 
Sbjct: 11  VKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGM 70

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIY-LLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           D+   +  ++ G     +   R    + + LL  + KP +A++NG   GGG    +    
Sbjct: 71  DLKEYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDL 130

Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACGLATH 213
            +   +  F   E   G  P    S  ++   GH       +TG    G +    GL   
Sbjct: 131 AICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGL--- 187

Query: 214 YSVSEKLPLIEEEL 227
             V+E +PL   +L
Sbjct: 188 --VNESVPL--AQL 197

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D Length = 263

 Score =  100 bits (251), Expect = 8e-25
 Identities = 27/167 (16%), Positives = 46/167 (27%), Gaps = 6/167 (3%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           ++   +          +    F     D +   V + GSG A+ A  D        +   
Sbjct: 39  MHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFP---SLGDVTN 95

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA-TPE 167
             E    +      +  L     P ++ +NG  +       +     +A   TVF   P 
Sbjct: 96  PREWDKTYWEGKKVLQNLLDIEVPVISAVNGAALLHSE-YILTTDIILASENTVFQDMPH 154

Query: 168 TLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH 213
              G  P  G         G   G +   T  KL   +     +   
Sbjct: 155 LNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHE 201

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis} Length = 264

 Score =   99 bits (250), Expect = 1e-24
 Identities = 43/197 (21%), Positives = 70/197 (35%), Gaps = 15/197 (7%)

Query: 20  SQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNI 79
               T  + T    + + +          L RP   NALN+ +  +L +  +    D + 
Sbjct: 7   HHMGTLEAQTQGPGSMIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRK-AGDGSA 65

Query: 80  GFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNG 139
             + + G G AFCAG D+             +  D    L+  +        P V  +NG
Sbjct: 66  RAIVLTGQGTAFCAGADLSG----DAFA--ADYPDRLIELHKAMDASP---MPVVGAING 116

Query: 140 VTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH---LGEFLALT 196
             +G G  +++    RV      F  P +  G   D  +   LS L GH       + L+
Sbjct: 117 PAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARA--MLLS 174

Query: 197 GAKLNGAEMMACGLATH 213
             KL     +  G+A  
Sbjct: 175 AEKLTAEIALHTGMANR 191

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} Length = 233

 Score = 98.8 bits (247), Expect = 2e-24
 Identities = 39/167 (23%), Positives = 59/167 (35%), Gaps = 9/167 (5%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           ++    +N L   M   LN+   A + D N+G + + G+ R F  G D+      +  G+
Sbjct: 20  MDDGK-VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDL----KVLTSGE 73

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            +   D  R  +   Y L ++ KP V    G  +  GA +   G  RVA         E 
Sbjct: 74  AKPAIDMLRGGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEV 133

Query: 169 LIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH 213
            IG      A   L     P    +  A       G   +A G    
Sbjct: 134 AIGMTIPYAAMEVLKLRLTPSAYQQ-AAGLAKTFFGETALAAGFIDE 179

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3 Length = 253

 Score = 99.1 bits (248), Expect = 2e-24
 Identities = 51/169 (30%), Positives = 71/169 (42%), Gaps = 9/169 (5%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LN P   N L+  M   L +     E DP +  V + G G+AF AG D+  L   + +  
Sbjct: 14  LNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLER-VTELG 72

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            EE      +L    + + T+ KP VA +NG  + GGAG+++     V   +      E 
Sbjct: 73  AEENYRHSLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEV 132

Query: 169 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 213
            IGF   A  S  L      +GE  A    LTG  +   E  A GL   
Sbjct: 133 KIGFVA-ALVSVILVRA---VGEKAAKDLLLTGRLVEAREAKALGLVNR 177

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa} Length = 258

 Score = 98.8 bits (247), Expect = 3e-24
 Identities = 39/183 (21%), Positives = 61/183 (33%), Gaps = 12/183 (6%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V  E + +  +  L+R    NA ++ M A L      +E         +   G  F AG 
Sbjct: 14  VTREQRGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGL 73

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTF 154
           D++     +          +         ++     KP V  + G     G  + +    
Sbjct: 74  DLME----LAPKLAASGFRYPDGGVDPWGVVQPRRSKPLVVAVQGTCWTAGIELMLNADI 129

Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 210
            VA   T FA  E L G  P  G++      P   G   A    LTG + +  E +   L
Sbjct: 130 AVAARGTRFAHLEVLRGIPPLGGSTV---RFPRAAGWTDAMRYILTGDEFDADEALRMRL 186

Query: 211 ATH 213
            T 
Sbjct: 187 LTE 189

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A Length = 258

 Score = 98.0 bits (245), Expect = 5e-24
 Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 15/183 (8%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +    +    +  L RP  LNAL+  M A++    +A++ +  +  + + G GRAF AG 
Sbjct: 7   IAARQEGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGA 66

Query: 96  DIVSLYHFMNQGKLEECKDF-FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
           DI      M +      +       +  + ++     P +A +NG+ +GGG  +++    
Sbjct: 67  DIQE----MAKDDPIRLEWLNQFADWDRLSIVK---TPMIAAVNGLALGGGFELALSCDL 119

Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 210
            VA     F  PE  +G  P AG +  L+ L   +G   A     TGA+++  E    G+
Sbjct: 120 IVASSAAEFGFPEVNLGVMPGAGGTQRLTKL---IGPKRALEWLWTGARMSAKEAEQLGI 176

Query: 211 ATH 213
              
Sbjct: 177 VNR 179

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi} Length = 263

 Score = 98.1 bits (245), Expect = 6e-24
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 7/166 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDI--VSLYHFMNQ 106
           L R  A + L+  M A L+   +    D ++  + + G GR FCAG D+  +  +     
Sbjct: 22  LGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPD 80

Query: 107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP 166
                  D F    + +  L    KP +A++ G+    G  +        A     F  P
Sbjct: 81  EGRAFVTDLFEACSALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLP 140

Query: 167 ETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGL 210
               G      A   +S +     + E +ALTGA  +    +A GL
Sbjct: 141 GVQNGGFCTTPAV-AVSRVIGRRAVTE-MALTGATYDADWALAAGL 184

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} Length = 268

 Score = 98.0 bits (245), Expect = 7e-24
 Identities = 39/167 (23%), Positives = 69/167 (41%), Gaps = 5/167 (2%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           +NR S  NA +  +  ++     +  ND N+  + +K +G+ F AG D+  +    N  +
Sbjct: 19  MNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTE 78

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            EE  +    L + +Y +    KP +A++ G   GGGAG++      +A     F   E 
Sbjct: 79  -EENLEDSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEV 137

Query: 169 LIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH 213
            +G  P A  S Y+            L ++    +     +  L  H
Sbjct: 138 KLGLIP-AVISPYVVRAIGERAAKM-LFMSAEVFDATRAYSLNLVQH 182

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A Length = 275

 Score = 97.6 bits (244), Expect = 1e-23
 Identities = 44/187 (23%), Positives = 70/187 (37%), Gaps = 16/187 (8%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP   NA+N     +L + F+    D +   V + G+G+ F +G D++ +   + Q  
Sbjct: 19  LNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPP 78

Query: 109 LEECKDFFRTLYSFIYLLGTHL-------KPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
            ++       L   I              KP +A ++G  +GGG  +      R      
Sbjct: 79  GDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDA 138

Query: 162 VFATPETLIGFHPDAGASFYLSHLPGHLG---EFLALTGAKLNGAEMMACGLATHYSVSE 218
            F   E  +G   D G    L  + G+     E L  T  K+   E +  GL     VS 
Sbjct: 139 FFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNE-LTFTARKMMADEALDSGL-----VSR 192

Query: 219 KLPLIEE 225
             P  + 
Sbjct: 193 VFPDKDV 199

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} Length = 267

 Score = 97.3 bits (243), Expect = 1e-23
 Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 16/203 (7%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDI--------VSL 100
           LN P   NAL+T + ++L++  +   +DP +  V +  +G  FCAG D+         S 
Sbjct: 26  LNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSS 85

Query: 101 YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK 160
            + M   +  E     R +            P +A ++G    GG G+       VA  +
Sbjct: 86  AYDMAVERAREMAALMRAIVES-------RLPVIAAIDGHVRAGGFGLVGACDIAVAGPR 138

Query: 161 TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL 220
           + FA  E  IG  P   +   L  L         LTG K +       GL    +  +  
Sbjct: 139 SSFALTEARIGVAPAIISLTLLPKLSARAAARYYLTGEKFDARRAEEIGLI-TMAAEDLD 197

Query: 221 PLIEEELGKLVTDDPSVIEACLE 243
             I++ +  +    P  + A   
Sbjct: 198 AAIDQLVTDVGRGSPQGLAASKA 220

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis} Length = 265

 Score = 97.2 bits (243), Expect = 1e-23
 Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 15/185 (8%)

Query: 36  VLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFC 92
           + V+      +    LNR    N+L+  +  +L  +      + N   V + G+G +AFC
Sbjct: 10  ISVDYA-TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFC 68

Query: 93  AGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPG 152
           AG D+            E+ +     + + + ++    +P +A +NG+ +GGG  +S+  
Sbjct: 69  AGADLKE----RAGMNEEQVRHAVSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLAC 124

Query: 153 TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMAC 208
            FR+A         ET +   P AG +  L  L   +G   A     TG +++  E    
Sbjct: 125 DFRIAAESASLGLTETTLAIIPGAGGTQRLPRL---IGVGRAKELIYTGRRISAQEAKEY 181

Query: 209 GLATH 213
           GL   
Sbjct: 182 GLVEF 186

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum} Length = 278

 Score = 96.9 bits (242), Expect = 2e-23
 Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 14/203 (6%)

Query: 18  ALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDP 77
           +++ + + +    +     LVE + ++ +  +NRPS  NAL+  M   + + +   +NDP
Sbjct: 4   SMAPNTSETPANGESGPDALVEQRGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDP 63

Query: 78  NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC--KDFFRTLYSFIYLLGTHL-KPHV 134
           +I    + G+G  FCAG D+ +      +    +      +        L G  L KP +
Sbjct: 64  DIRCCILTGAGGYFCAGMDLKA----ATKKPPGDSFKDGSYDPSRIDALLKGRRLKKPLI 119

Query: 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA 194
           A + G  + GG  +      RVA     F   E     +P  G++     L   +   +A
Sbjct: 120 AAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAV---RLVRQIPYTVA 176

Query: 195 ----LTGAKLNGAEMMACGLATH 213
               LTG  +  AE    GL  H
Sbjct: 177 CDLLLTGRHITAAEAKEMGLVGH 199

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A* Length = 278

 Score = 96.5 bits (241), Expect = 3e-23
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 13/182 (7%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LVE      +  LNRP ALNALN+ +  ++       ++DP+IG + + GS +AF AG 
Sbjct: 27  ILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGA 86

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           DI       +    +     F   +  +  +     P +A + G  +GGG  +++     
Sbjct: 87  DIKE---MADLTFADAFTADFFATWGKLAAVR---TPTIAAVAGYALGGGCELAMMCDVL 140

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLA 211
           +A     F  PE  +G  P  G S  L+     +G+  A    LTG  ++ AE    GL 
Sbjct: 141 IAADTAKFGQPEIKLGVLPGMGGSQRLTRA---IGKAKAMDLILTGRTMDAAEAERSGLV 197

Query: 212 TH 213
           + 
Sbjct: 198 SR 199

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A Length = 262

 Score = 96.1 bits (240), Expect = 3e-23
 Identities = 48/193 (24%), Positives = 73/193 (37%), Gaps = 17/193 (8%)

Query: 27  SVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG 86
           S+++++   V VE        ILNRP A NA++    A L   F  ++ DP      + G
Sbjct: 4   SMSEEMQPAVRVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWG 63

Query: 87  SGRAFCAGGDIVSLYHFMNQGKLEEC--KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGG 144
               FCAG D+      M   +  E           S + L     KP +A ++G  + G
Sbjct: 64  DNGTFCAGADL----KAMGTDRGNELHPHGPGPMGPSRLRL----SKPVIAAISGHAVAG 115

Query: 145 GAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKL 200
           G  +++    RV     V        G     G +     LP  +G   A    LTG  +
Sbjct: 116 GIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTI---RLPRLIGHSRAMDLILTGRPV 172

Query: 201 NGAEMMACGLATH 213
           +  E +  GL   
Sbjct: 173 HANEALDIGLVNR 185

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis} Length = 286

 Score = 96.2 bits (240), Expect = 5e-23
 Identities = 40/165 (24%), Positives = 63/165 (38%), Gaps = 7/165 (4%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
            LNRP A NAL+  M A L + F     D ++  V +  SG+AFCAG D+  +     + 
Sbjct: 40  TLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEM---RAEP 96

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
             E  +  F      +  +     P +A ++G+    G  +       VA     FA   
Sbjct: 97  SREYYEKLFARCTDVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSG 156

Query: 168 TLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGL 210
             +G          LS         E + +TG  ++  +    GL
Sbjct: 157 INVGLFCSTPGV-ALSRNVGRKAAFE-MLVTGEFVSADDAKGLGL 199

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis} Length = 254

 Score = 94.6 bits (236), Expect = 9e-23
 Identities = 29/198 (14%), Positives = 56/198 (28%), Gaps = 12/198 (6%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L+RP   NAL+  +   L     A   +  +  +   G+GR F AG D            
Sbjct: 22  LSRPEKRNALSAELVEALIDGVDAAHRE-QVPLLVFAGAGRNFSAGFDF----TDYETQS 76

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
             +       +   +  +       +A+ +G   G G  +     +R    +  F  P  
Sbjct: 77  EGDLLLRMVRIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGL 136

Query: 169 LIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH-YSVSEKLPLIEE 225
             G       +     +         +  +    +  E    G      + ++   LI+ 
Sbjct: 137 KFGLVL---GTRRFRDIVGADQALS-ILGSARAFDADEARRIGFVRDCAAQAQWPALIDA 192

Query: 226 ELGKLVTDDPSVIEACLE 243
                   DP+       
Sbjct: 193 AAEAATALDPATRATLHR 210

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum} Length = 265

 Score = 94.5 bits (236), Expect = 1e-22
 Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 18/183 (9%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           VLVE +    +  +NRP A N++N  +   L       + D  +    + G+G +FCAG 
Sbjct: 17  VLVEQRDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGM 76

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTF 154
           D+ +      +G      +        +        KP +A + G  + GG  +++    
Sbjct: 77  DLKA----FARG------ENVVVEGRGLGFTERPPAKPLIAAVEGYALAGGTELALATDL 126

Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 210
            VA   + F  PE   G     G       LP  +   +A    LTG  L+     A G+
Sbjct: 127 IVAARDSAFGIPEVKRGLVAGGGGLL---RLPERIPYAIAMELALTGDNLSAERAHALGM 183

Query: 211 ATH 213
              
Sbjct: 184 VNV 186

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A Length = 334

 Score = 96.0 bits (239), Expect = 1e-22
 Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 18/193 (9%)

Query: 36  VLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR---- 89
           +      +        NRP   NA   +   +L ++       P++G V + G+G     
Sbjct: 57  ITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKD 116

Query: 90  ---AFCAGGDI---VSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL----KPHVAILNG 139
              AFC+GGD        +    G   +  D  R     I  +   +    K  + ++NG
Sbjct: 117 GGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNG 176

Query: 140 VTMGGGAGVSIPGTFRVACGKT-VFATPETLIGFHPDAGASFYLSHLPGH-LGEFLALTG 197
              GGG  + +     +A  +   F   +  +G       S YL+   G      +   G
Sbjct: 177 WAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLG 236

Query: 198 AKLNGAEMMACGL 210
                 +M   G 
Sbjct: 237 RTYTAEQMHQMGA 249

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A Length = 272

 Score = 94.1 bits (235), Expect = 2e-22
 Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 12/170 (7%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 107
           +NR    N+L+ N+   L+K   A ++D  +  + ++      FCAG D+        + 
Sbjct: 27  INRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADL----KERAKM 82

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
              E   F   + + I  +     P +A ++G+ +GGG  +++    RVA         E
Sbjct: 83  SSSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVE 142

Query: 168 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 213
           T +   P  G +  L      +G  LA     +   L+G E  A GL +H
Sbjct: 143 TKLAIIPGGGGTQRLPRA---IGMSLAKELIFSARVLDGKEAKAVGLISH 189

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A Length = 333

 Score = 95.2 bits (237), Expect = 2e-22
 Identities = 37/193 (19%), Positives = 61/193 (31%), Gaps = 32/193 (16%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG- 107
            NRP   NA+  +   +L+ L +  + DP++  + + G G  FCAG D+ +     +   
Sbjct: 50  FNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAG 109

Query: 108 -------------------------KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTM 142
                                                      L    KP V  ++G  +
Sbjct: 110 GGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCV 169

Query: 143 GGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKL 200
            GG  +++     +A        P   +   P AG     +H          L  TG  +
Sbjct: 170 AGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAG---LWAHRLGDQRAKR-LLFTGDCI 225

Query: 201 NGAEMMACGLATH 213
            GA+    GLA  
Sbjct: 226 TGAQAAEWGLAVE 238

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A* Length = 260

 Score = 93.4 bits (233), Expect = 3e-22
 Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 13/169 (7%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI       N+  
Sbjct: 22  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKE---MQNRTF 78

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
            +     F + +  I  +    KP +A +NG  +GGG  +++      A  K  F  PE 
Sbjct: 79  QDCYSGKFLSHWDHITRIK---KPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEI 135

Query: 169 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 213
           L+G  P AG +  L+     +G+ LA    LTG +++  +    GL + 
Sbjct: 136 LLGTIPGAGGTQRLTRA---VGKSLAMEMVLTGDRISAQDAKQAGLVSK 181

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus} Length = 265

 Score = 93.3 bits (233), Expect = 3e-22
 Identities = 51/183 (27%), Positives = 72/183 (39%), Gaps = 12/183 (6%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           +LVE      +  +NRP   NAL+TNM ++    +   ++D  I    + G+G A+C GG
Sbjct: 11  LLVERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGG 70

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTF 154
           D+          +                LL   L KP +A +NG  +GGG  +      
Sbjct: 71  DLSD----GWMVRDGSAPPLDPATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDI 126

Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 210
           RV+     F  PE   G  P AG+   L      +    A    LTG  L   E    GL
Sbjct: 127 RVSDEHATFGLPEVQRGLVPGAGSMVRLKRQ---IPYTKAMEMILTGEPLTAFEAYHFGL 183

Query: 211 ATH 213
             H
Sbjct: 184 VGH 186

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis} Length = 263

 Score = 92.6 bits (231), Expect = 7e-22
 Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 18/185 (9%)

Query: 36  VLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA 93
           +         + +  L+RP ALNALN  + A++    + ++ D  IG + + GS RAF A
Sbjct: 11  IATSRPVA-GVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAA 69

Query: 94  GGDIVSLYHFMNQGKLEECKDF-FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPG 152
           G DI      M      + ++    + +  +  +    KP VA + G  +GGG  +++  
Sbjct: 70  GADIAE----MVTLTPHQARERNLLSGWDSLTQVR---KPIVAAVAGYALGGGCELAMLC 122

Query: 153 TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMAC 208
              +A     F  PE  +G  P  G +  L+     +G+  A    LTG  L   E    
Sbjct: 123 DLVIAADTARFGQPEITLGILPGLGGTQRLTRA---VGKAKAMDLCLTGRSLTAEEAERV 179

Query: 209 GLATH 213
           GL + 
Sbjct: 180 GLVSR 184

>3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A Length = 279

 Score = 91.9 bits (229), Expect = 1e-21
 Identities = 37/174 (21%), Positives = 64/174 (36%), Gaps = 18/174 (10%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP A NA N  +  +L+  +     D ++  + ++ +G+ F AG D+           
Sbjct: 35  LNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRG----GGPVP 90

Query: 109 LEECKDFFRTLYSFIYLLGTHL-----KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF 163
            +   +F     S  YL  +       KP +A + G  + GG  +  P    +A    +F
Sbjct: 91  DKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALF 150

Query: 164 ATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 213
           + P  L+            +     LG   A     TG  +   E+   G+   
Sbjct: 151 SDPVVLMDI--GGVEYHGHTWE---LGPRKAKEILFTGRAMTAEEVAQTGMVNR 199

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus} Length = 256

 Score = 91.0 bits (227), Expect = 2e-21
 Identities = 40/183 (21%), Positives = 64/183 (34%), Gaps = 19/183 (10%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           VL+E +    +  +NRP A NA+N  +   L       ++  ++    + G+G  FCAG 
Sbjct: 9   VLIEQRDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGM 68

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGTF 154
           D+ +       G+              +        KP +A + G  + GG  + +    
Sbjct: 69  DLKA----FVSGEAVLS-------ERGLGFTNVPPRKPIIAAVEGFALAGGTELVLSCDL 117

Query: 155 RVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 210
            VA     F  PE   G    AG       LP  +   +A    LTG      +    G 
Sbjct: 118 VVAGRSAKFGIPEVKRGLVAGAGGLL---RLPNRIPYQVAMELALTGESFTAEDAAKYGF 174

Query: 211 ATH 213
              
Sbjct: 175 INR 177

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis} Length = 261

 Score = 90.6 bits (226), Expect = 3e-21
 Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 11/182 (6%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           + V  + +  +A LN   A NA+++ +   + +L    E D NI  V + G GR F AG 
Sbjct: 8   LSVRVEDHIAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGA 66

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           DI          +  E     +  +  +       KP +A ++G  +GGG   ++    R
Sbjct: 67  DIKEFTSVTEAKQATELAQLGQVTFERVEKCS---KPVIAAIHGAALGGGLEFAMSCHMR 123

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLA 211
            A        PE  +G  P    +  L      +G+  A    LT   + GAE +  GL 
Sbjct: 124 FATESAKLGLPELTLGLIPGFAGTQRLPRY---VGKAKACEMMLTSTPITGAEALKWGLV 180

Query: 212 TH 213
             
Sbjct: 181 NG 182

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} Length = 274

 Score = 90.7 bits (226), Expect = 3e-21
 Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 21/178 (11%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP ALNAL+ +M  +L   +   END  +  + + G+GRAFC+G D+      + +  
Sbjct: 26  LNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKE----IPEDG 81

Query: 109 LEECKDFFRTLYSFIYLLGTHL-------KPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
               +  + + Y                 KP +  +NG+  G G          +A  + 
Sbjct: 82  KVIYERPYLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQA 141

Query: 162 VFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAK--LNGAEMMACGLATH 213
            F  P   IG             +   L   +A    L G    ++       GL + 
Sbjct: 142 TFFDPHVSIGLVAGRELVR----VSRVLPRSIALRMALMGKHERMSAQRAYELGLISE 195

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris} Length = 275

 Score = 90.3 bits (225), Expect = 5e-21
 Identities = 45/169 (26%), Positives = 64/169 (37%), Gaps = 13/169 (7%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP   NALN  + A L       +    I  V + G G  F AG D+      + +  
Sbjct: 31  LNRPKKRNALNDGLMAALKDCLT--DIPDQIRAVVIHGIGDHFSAGLDLSE----LRERD 84

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
             E     +T +     +     P +A L G  +GGG  ++     RVA     +A PE 
Sbjct: 85  ATEGLVHSQTWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEG 144

Query: 169 LIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 213
             G     G S  L  L   +G        LTG   + AE +  G + +
Sbjct: 145 SRGIFVGGGGSVRLPRL---IGVARMADMMLTGRVYSAAEGVVHGFSQY 190

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} PDB: 3r9s_A 3r0o_A Length = 267

 Score = 89.1 bits (222), Expect = 1e-20
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 15/184 (8%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAG 94
            L E + N  +  +NRP A NA+N  +   +    +  ++DP +  V + G+G ++FCAG
Sbjct: 11  ALAERRGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAG 70

Query: 95  GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL-KPHVAILNGVTMGGGAGVSIPGT 153
            D+ +    + + +     D     + F   +   + KP +A +NG  +GGG  +++   
Sbjct: 71  ADLKA----IARRENLYHPDHPE--WGFAGYVRHFIDKPTIAAVNGTALGGGTELALASD 124

Query: 154 FRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACG 209
             VA  +  F  PE   G    AG  F    +   L   +A    LTG  L+ A     G
Sbjct: 125 LVVADERAQFGLPEVKRGLIAAAGGVFR---IAEQLPRKVAMRLLLTGEPLSAAAARDWG 181

Query: 210 LATH 213
           L   
Sbjct: 182 LINE 185

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens} Length = 287

 Score = 88.9 bits (221), Expect = 2e-20
 Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
                    R  +L+ P   N L+  M   L        +  ++  + +   G  F +G 
Sbjct: 35  TSARQLDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGH 94

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D+  L     +   +   + F+T    +  +  H  P +A++NG+    G  +       
Sbjct: 95  DLKEL---TEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIA 151

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATH 213
           VA  K+ FATP   +G          L+         E +  TG  ++  E +  GL + 
Sbjct: 152 VASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALE-MLFTGEPISAQEALLHGLLSK 209

Query: 214 YSVSEKL 220
                +L
Sbjct: 210 VVPEAEL 216

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus} Length = 273

 Score = 88.4 bits (220), Expect = 2e-20
 Identities = 40/170 (23%), Positives = 68/170 (40%), Gaps = 11/170 (6%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG 107
           +NRP   NA      A++   F    +D N+  + + G G  AFC+GGD     H    G
Sbjct: 28  INRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVG 87

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
           + +  +     L   I ++    KP +A++ G  +GGG  +++     +A    +F    
Sbjct: 88  EDQIPRLNVLDLQRLIRIIP---KPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTG 144

Query: 168 TLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 213
             +G       S YL+ +   +G   A        + N  E +  GL   
Sbjct: 145 PKVGSFDAGYGSGYLARI---VGHKKAREIWYLCRQYNAQEALDMGLVNT 191

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum} Length = 277

 Score = 87.2 bits (217), Expect = 7e-20
 Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 12/182 (6%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           V V         +++RP   NA+   +  ++           +IG V + G    F AG 
Sbjct: 26  VSVVADQGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGD 84

Query: 96  DIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFR 155
           D+      +      E     R     I  +    KP VA + G  +G G  +++   +R
Sbjct: 85  DMPE----LRTLNAPEADTAARVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAADWR 140

Query: 156 VACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLA 211
           V+     F   E L G  P  G    L+ +   +G   A     +G   +  E +A GL 
Sbjct: 141 VSGDNVKFGATEILAGLIPGGGGMGRLTRV---VGSSRAKELVFSGRFFDAEEALALGLI 197

Query: 212 TH 213
             
Sbjct: 198 DD 199

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A* Length = 261

 Score = 85.6 bits (213), Expect = 2e-19
 Identities = 33/186 (17%), Positives = 60/186 (32%), Gaps = 19/186 (10%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG--RAFCA 93
           V V       +   N    LNAL+      L +          I  + ++     + F A
Sbjct: 6   VNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRP-EIRCIILRAPSGSKVFSA 64

Query: 94  GGDIVSLYHFMNQGKLEECK--DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIP 151
           G DI    H +  G  +     D  R +   I       KP ++++ G   GG   + + 
Sbjct: 65  GHDI----HELPSGGRDPLSYDDPLRQITRMIQKFP---KPIISMVEGSVWGGAFEMIMS 117

Query: 152 GTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMA 207
               +A   + F+     +G   +      L+      G  +      T + +     +A
Sbjct: 118 SDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRD---AGFHIVKELIFTASPITAQRALA 174

Query: 208 CGLATH 213
            G+  H
Sbjct: 175 VGILNH 180

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis} Length = 287

 Score = 85.7 bits (213), Expect = 2e-19
 Identities = 32/188 (17%), Positives = 55/188 (29%), Gaps = 17/188 (9%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAG 94
           + V  +      IL+ P  +N +   M  +L  +     +D ++  +    +    F A 
Sbjct: 11  LRVSSEHGVARIILDNP-PVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAH 69

Query: 95  GDIVSL----YHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSI 150
            D+                    + F+ +   I       +  +  L G   GGGA    
Sbjct: 70  VDMRIGEKMDALQELAASAPADVNVFQAVGELIRHQP---QVTIVKLAGKARGGGAEFVA 126

Query: 151 PGTFRVACG-KTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEM 205
                 A          E L+G  P  G + YL      +G   A    LT    +    
Sbjct: 127 AADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGR---VGRNRALEVVLTADLFDAETA 183

Query: 206 MACGLATH 213
            + G    
Sbjct: 184 ASYGWINR 191

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A* Length = 440

 Score = 87.2 bits (216), Expect = 4e-19
 Identities = 41/203 (20%), Positives = 68/203 (33%), Gaps = 29/203 (14%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-------- 87
           V +E +       + R   LNA +      +         DP +    ++G         
Sbjct: 169 VHLERRDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYR 228

Query: 88  -GRAFCAGGDI-------VSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHL-----KPHV 134
             R F AG ++       +SL  F+ + +L       R + +     G        KP V
Sbjct: 229 GKRVFSAGINLKYLSQGGISLVDFLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWV 288

Query: 135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA 194
           A ++G  +GGGA + +     +A     F+ P    G  P A        L    G  ++
Sbjct: 289 AAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEGIIPGAANLR----LGRFAGPRVS 344

Query: 195 ----LTGAKLNGAEMMACGLATH 213
               L G ++   E  A  L   
Sbjct: 345 RQVILEGRRIWAKEPEARLLVDE 367

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A Length = 305

 Score = 84.8 bits (210), Expect = 8e-19
 Identities = 33/219 (15%), Positives = 70/219 (31%), Gaps = 19/219 (8%)

Query: 11  RYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALN----ALNTNMGAKL 66
            +  D  ++S  +           +++ E + +     ++   A+N      +T +   +
Sbjct: 9   HHSQDPNSMSAVQPFIRTNIGSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDI 68

Query: 67  NKLFKA-----WENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYS 121
                               V +      F  GGD+      + +G      D+ +    
Sbjct: 69  TGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFCQLIREGDRARLLDYAQRCVR 128

Query: 122 FIYLLGTHL---KPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA 178
            ++     L      +A++ G  +GGG   ++     +A    +   PE L    P  GA
Sbjct: 129 GVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGA 188

Query: 179 SFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGLATH 213
               S +   +   LA    L G   +  +++  GL   
Sbjct: 189 Y---SFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDR 224

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV} Length = 232

 Score = 83.4 bits (207), Expect = 8e-19
 Identities = 27/165 (16%), Positives = 46/165 (27%), Gaps = 12/165 (7%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LN    +NA++ ++    N      E D  I  V + G       G D+      M    
Sbjct: 21  LNNG-KVNAISPDVIIAFNAALDQAEKDRAI--VIVTGQPGILSGGYDL----KVM-TSS 72

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPE 167
            E   +      +    + +H  P +    G  +  GA + +   +R+   G       E
Sbjct: 73  AEAAINLVAQGSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNE 132

Query: 168 TLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGL 210
             IG                         +     +    MA G 
Sbjct: 133 VQIGMTMHHAGIELARDRLRKSAFNR-SVINAEMFDPEGAMAAGF 176

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A Length = 260

 Score = 83.0 bits (206), Expect = 1e-18
 Identities = 38/184 (20%), Positives = 64/184 (34%), Gaps = 11/184 (5%)

Query: 36  VLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFC 92
           VLVE  A + +A+     P  +N+L+     +L    +  END +   V +       F 
Sbjct: 5   VLVEPDAGAGVAVMKFKNP-PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFS 63

Query: 93  AGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPG 152
           AG D+      M          +++ +      L       V+ +NG    GG  V++  
Sbjct: 64  AGLDLT----EMCGRSPAHYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTC 119

Query: 153 TFRVACGKTVFAT--PETLIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACG 209
            +R+      +     ET +G          L +  GH   E     G     AE +  G
Sbjct: 120 DYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVG 179

Query: 210 LATH 213
           +   
Sbjct: 180 IVDQ 183

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis} Length = 289

 Score = 82.6 bits (205), Expect = 3e-18
 Identities = 37/187 (19%), Positives = 55/187 (29%), Gaps = 17/187 (9%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAG 94
           +          A  N P  +N +   +   L  L +   +      V    +    F   
Sbjct: 10  IKARLDGTVLSATFNAP-PMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPH 68

Query: 95  GDIVSLYHFMNQGKLEECKDFFRTLYSFIYL---LGTHLKPHVAILNGVTMGGGAGVSIP 151
            D+      + +   E  K       S   L   L       +A L G   G G+   + 
Sbjct: 69  VDMT----KVPEYTAEAAKAGGPGDASLGMLFRKLSQLPAVTIAKLRGRARGAGSEFLLA 124

Query: 152 GTFRVA-CGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMM 206
              R A     +   PE  IG  P AGA  +L+ L   LG   A    LT +  +     
Sbjct: 125 CDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRL---LGRGRALEAVLTSSDFDADLAE 181

Query: 207 ACGLATH 213
             G    
Sbjct: 182 RYGWVNR 188

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP} Length = 275

 Score = 81.5 bits (202), Expect = 6e-18
 Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 16/172 (9%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG------RAFCAGGDIVSLYH 102
           +NRP   NA       +L   F     D  IG V + G+G       AFC+GGD      
Sbjct: 25  INRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSV--- 81

Query: 103 FMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV 162
               G +++       +     L+ +  K  +A++ G  +GGG  + +     +A    +
Sbjct: 82  RGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAI 141

Query: 163 FATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACGL 210
           F      +G       S YL+ +   +G+  A        + +  E    G+
Sbjct: 142 FGQTGPKVGSFDGGFGSSYLARI---VGQKKAREIWYLCRQYSAQEAERMGM 190

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 3h02_A 2iex_A Length = 289

 Score = 80.7 bits (200), Expect = 1e-17
 Identities = 38/193 (19%), Positives = 74/193 (38%), Gaps = 29/193 (15%)

Query: 36  VLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFC 92
           +  E K+   +A   +NRP   NA       ++ +       D NIG + + G+G +AFC
Sbjct: 29  IRYE-KSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFC 87

Query: 93  AGGDI--------VSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGG 144
           +GGD               ++   + + +   RT            KP VA++ G ++GG
Sbjct: 88  SGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCP----------KPVVAMVAGYSIGG 137

Query: 145 GAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKL 200
           G  + +     +A    +F      +G       + Y++ +   +G+  A        + 
Sbjct: 138 GHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARI---VGQKKAREIWFLCRQY 194

Query: 201 NGAEMMACGLATH 213
           +  + +  GL   
Sbjct: 195 DAKQALDMGLVNT 207

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus} Length = 265

 Score = 79.9 bits (198), Expect = 2e-17
 Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 14/184 (7%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAG 94
           + V  +       L+   + N+ +     + N        DP+I  V +     + F AG
Sbjct: 11  LTVFKEDGIAEIHLHINKS-NSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAG 69

Query: 95  GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTF 154
            DI    +F+          F       +  +    + ++A L G T+GGG  +++    
Sbjct: 70  ADI----NFLRSADPRFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGGGLEMALACDL 125

Query: 155 RVACGKTV-FATPETLIGFHPDAGASFYLSHLPGHLGEFLA----LTGAKLNGAEMMACG 209
           R    +      PE  +G     G +  L+ L   +G   A    +TG  +   E +  G
Sbjct: 126 RFMGDEAGKIGLPEVSLGVLAGTGGTQRLARL---IGYSRALDMNITGETITPQEALEIG 182

Query: 210 LATH 213
           L   
Sbjct: 183 LVNR 186

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans} Length = 556

 Score = 74.3 bits (182), Expect = 8e-15
 Identities = 35/215 (16%), Positives = 65/215 (30%), Gaps = 11/215 (5%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWEND-PNIGFVSMKGSG-RAFCAGGDIVSLYHFMN 105
                  LN+ +  +  +L+   +    + P +  V +     R FC+G +I  L    +
Sbjct: 45  RDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFMLGLSTH 104

Query: 106 QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC--GKTVF 163
             K+  CK    T               +A +NG   GGG  +++            +  
Sbjct: 105 AWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSV 164

Query: 164 ATPE-TLIGFHPDAGASFYLSHL----PGHLGEFLALTGAKLNGAEMMACGLATH-YSVS 217
           + PE  L+G  P  G    ++            F       + G    A  L       +
Sbjct: 165 SLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFC-TVVEGVRGERAKAWRLVDEVVKPN 223

Query: 218 EKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPD 252
           +    I+    +L         A     + +   D
Sbjct: 224 QFDQAIQARALELAAQSDRPAHAQGVPLTRIERTD 258

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana} Length = 725

 Score = 73.5 bits (181), Expect = 2e-14
 Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 9/166 (5%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L  P   N+L+ ++   L   ++   +  ++  + + G+   F  G DI      M +G 
Sbjct: 23  LINPPV-NSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDISGFGE-MQKGN 80

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
           ++E K  + ++     LL    KP VA ++G+ +GGG  +++    R++        PE 
Sbjct: 81  VKEPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPEL 140

Query: 169 LIGFHPDAGASFYLSHLPGHLGEFLAL----TGAKLNGAEMMACGL 210
            +G  P  G +  L  L   +G   AL    T   +   E  + GL
Sbjct: 141 QLGVIPGFGGTQRLPRL---VGLTKALEMILTSKPVKAEEGHSLGL 183

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A* Length = 742

 Score = 67.3 bits (165), Expect = 2e-12
 Identities = 39/206 (18%), Positives = 76/206 (36%), Gaps = 26/206 (12%)

Query: 9   ISRYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNK 68
              + +    L    +  +    L + + +          L  P   NA++  +  ++  
Sbjct: 4   SHHHHHHSSGLVPRGSHMAEYLRLPHSLAM--------IRLCNPPV-NAVSPTVIREVRN 54

Query: 69  LFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGT 128
             +   +D  +  + + G+   FCAG DI     F                      +  
Sbjct: 55  GLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG---LALGSLVDE-------IQR 104

Query: 129 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH 188
           + KP +A + GV +GGG  +++   +R+A  K     PE  +G  P A  +  L  +   
Sbjct: 105 YQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRV--- 161

Query: 189 LGEFLAL----TGAKLNGAEMMACGL 210
           +G  +AL    +G  L+  E +  G+
Sbjct: 162 VGVPVALDLITSGKYLSADEALRLGI 187

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 66.0 bits (160), Expect = 6e-12
 Identities = 69/397 (17%), Positives = 107/397 (26%), Gaps = 122/397 (30%)

Query: 1   MQRLKISNISRYFNDLRALSQHRTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNT 60
           M  +K             + Q        D L N   V  K N     ++R      L  
Sbjct: 95  MSPIKTEQRQPSMMTRMYIEQR-------DRLYNDNQVFAKYN-----VSRLQPYLKLRQ 142

Query: 61  NMGAKLNKLFKAWENDPNIGFVSMKGSGR-----AFCAGGDIVSLYHF----MNQGKLEE 111
                L +L        N+    + GSG+       C    +     F    +N      
Sbjct: 143 ----ALLEL----RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNS 194

Query: 112 CKDFFRTLYSFIYLLGTHL---------------------------KPHVA---ILNGVT 141
            +     L   +Y +  +                            KP+     +L  V 
Sbjct: 195 PETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV- 253

Query: 142 MGGGAGVSIPGTFRVACGKTVFAT-------------------PETLIGFHPDAGASF-- 180
                       F ++C K +  T                       +   PD   S   
Sbjct: 254 ----QNAKAWNAFNLSC-KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL 308

Query: 181 -YLSHLPGHLGEFLALTGAKLNG---AEMMACGLAT-----HYSVSEKLPLIEEELGKLV 231
            YL   P  L     LT         AE +  GLAT     H +  +   +IE  L  L 
Sbjct: 309 KYLDCRPQDLPR-EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL- 366

Query: 232 TDDPSVIEACLEKYSDL-VYPDKNSVIHRIDIVDKCFGL-------DTVEEIIDSLESEA 283
             +P+        +  L V+P   S      I      L         V  +++ L    
Sbjct: 367 --EPAEYRKM---FDRLSVFPP--SA----HIPTILLSLIWFDVIKSDVMVVVNKLHK-Y 414

Query: 284 SLINDPWCGSTLRL----LKEASPLSLKVSL-RSIRE 315
           SL+      ST+ +    L+    L  + +L RSI +
Sbjct: 415 SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.5 bits (125), Expect = 1e-07
 Identities = 49/346 (14%), Positives = 104/346 (30%), Gaps = 100/346 (28%)

Query: 24  TSSSVTDDLCNQVLVEGKANSRM-----AILNRPSALNALNTNMGAKLNK----LFKAWE 74
             S ++ +  + +++   A S        +L++      +   +   L      L    +
Sbjct: 42  PKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQE--EMVQKFVEEVLRINYKFLMSPIK 99

Query: 75  ---NDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK 131
                P++                 + + Y+        + +   + L          L+
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLR---QALLE--------LR 148

Query: 132 PHVAI-LNGVTMGGGAGVSIPGTFRVACGKTVFATPETL----IGFHPDAGASFYLS--- 183
           P   + ++G  + G              GKT  A  +      +    D    F+L+   
Sbjct: 149 PAKNVLIDG--VLG-------------SGKTWVAL-DVCLSYKVQCKMDFKI-FWLNLKN 191

Query: 184 -HLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPL--IEEELGK----------- 229
            + P  + E L     +++         + H S + KL +  I+ EL +           
Sbjct: 192 CNSPETVLEMLQKLLYQIDP---NWTSRSDH-SSNIKLRIHSIQAELRRLLKSKPYENCL 247

Query: 230 LVTDD---PSVIEA----CLEKYSDLVYPDKNSVIHR-IDIVDKCFGLDT----VEEIID 277
           LV  +        A    C           K  +  R   + D      T    ++    
Sbjct: 248 LVLLNVQNAKAWNAFNLSC-----------KILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 278 SL---ESEASLINDPWCGSTLRLL-KEA---SPLSLKVSLRSIREG 316
           +L   E ++ L+   +     + L +E    +P  L +   SIR+G
Sbjct: 297 TLTPDEVKSLLLK--YLDCRPQDLPREVLTTNPRRLSIIAESIRDG 340

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A* Length = 715

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 32/159 (20%), Positives = 52/159 (32%), Gaps = 8/159 (5%)

Query: 56  NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF 115
           N  N     +L +   A + D ++  V +      F  G DI            E     
Sbjct: 30  NKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDAEL-IAG 88

Query: 116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD 175
                           P VA +NG+ +GGG  + +   FRV         PE  +G +P 
Sbjct: 89  NLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPG 148

Query: 176 AGASFYLSHLPGHLGEFLAL----TGAKLNGAEMMACGL 210
            G +  L  L   +G   A+    +G +    + +    
Sbjct: 149 FGGTVRLPRL---IGVDNAVEWIASGKENRAEDALKVSA 184

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	350
4hdt_A	353	3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti	100.0
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	100.0
3bpt_A	363	3-hydroxyisobutyryl-COA hydrolase; coenzyme A, bet	100.0
4fzw_C	274	1,2-epoxyphenylacetyl-COA isomerase; structural ge	100.0
3hrx_A	254	Probable enoyl-COA hydratase; the spiral fold, the	100.0
4fzw_A	258	2,3-dehydroadipyl-COA hydratase; structural genomi	100.0
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	100.0
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	100.0
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	100.0
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	100.0
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	100.0
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	100.0
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	100.0
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	100.0
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	100.0
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	100.0
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	100.0
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	100.0
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	100.0
3qk8_A	272	Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SB	100.0
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	100.0
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	100.0
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 112 structural	100.0
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	100.0
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	100.0
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	100.0
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	100.0
3he2_A	264	Enoyl-COA hydratase ECHA6; fatty acid metabolism,	100.0
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	100.0
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	100.0
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	100.0
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	100.0
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	100.0
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	100.0
3t89_A	289	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	100.0
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	100.0
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	100.0
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	100.0
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	100.0
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	100.0
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	100.0
1wz8_A	264	Enoyl-COA hydratase; lyase, crotonase, hexamer, st	100.0
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	100.0
3gkb_A	287	Putative enoyl-COA hydratase; structural genomics,	100.0
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	100.0
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	100.0
4eml_A	275	Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coe	100.0
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	100.0
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	100.0
3t8b_A	334	1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase	100.0
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	100.0
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	100.0
3lao_A	258	Enoyl-COA hydratase/isomerase; alpha-beta sandwich	100.0
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	100.0
2uzf_A	273	Naphthoate synthase; lyase, menaquinone biosynthes	100.0
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	100.0
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	100.0
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	100.0
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	100.0
3isa_A	254	Putative enoyl-COA hydratase/isomerase; structural	100.0
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	100.0
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	100.0
3r6h_A	233	Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium m	100.0
2j5g_A	263	ALR4455 protein; enzyme evolution, C-C bond hydrol	100.0
1sg4_A	260	3,2-trans-enoyl-COA isomerase, mitochondrial; crot	100.0
1pjh_A	280	Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral	100.0
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	100.0
3ot6_A	232	Enoyl-COA hydratase/isomerase family protein; stru	100.0
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	100.0
3t3w_A	279	Enoyl-COA hydratase; ssgcid, structural genomics,	100.0
3njd_A	333	Enoyl-COA hydratase; ssgcid, mycobacerium smegmati	100.0
1szo_A	257	6-oxocamphor hydrolase; enzyme-product complex; HE	100.0
3zwc_A	742	Peroxisomal bifunctional enzyme; beta oxidation pa	100.0
2np9_A	440	DPGC; protein inhibitor complex, oxidoreductase; H	100.0
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	100.0
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	100.0
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	100.0
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	99.84
3rst_A	240	Signal peptide peptidase SPPA; alpha/beta protein	99.81
3viv_A	230	441AA long hypothetical NFED protein; protein-pept	99.79
1y7o_A	218	ATP-dependent CLP protease proteolytic subunit; hy	99.58
2f9y_B	304	Acetyl-coenzyme A carboxylase carboxyl transferas	99.54
2f9i_A	327	Acetyl-coenzyme A carboxylase carboxyl transferase	99.5
2f9y_A	339	Acetyl-COA carboxylase, carboxyltransferase alpha;	99.47
2cby_A	208	ATP-dependent CLP protease proteolytic subunit 1;	98.88
3qwd_A	203	ATP-dependent CLP protease proteolytic subunit; ca	98.49
1yg6_A	193	ATP-dependent CLP protease proteolytic subunit; en	98.43
2f6i_A	215	ATP-dependent CLP protease, putative; structural g	98.4
2w3p_A	556	Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ri	98.35
1tg6_A	277	Putative ATP-dependent CLP protease proteolytic S;	98.26
3p2l_A	201	ATP-dependent CLP protease proteolytic subunit; st	98.23
3bf0_A	593	Protease 4; bacterial, hydrolase, inner membrane,	97.86
4gm2_A	205	ATP-dependent CLP protease proteolytic subunit; st	97.83
1pix_A	587	Glutaconyl-COA decarboxylase A subunit; biotin-dep	97.57
2f9i_B	285	Acetyl-coenzyme A carboxylase carboxyl transferase	97.56
3iav_A	530	Propionyl-COA carboxylase complex B subunit; accas	97.55
3n6r_B	531	Propionyl-COA carboxylase, beta subunit; protein c	97.42
1x0u_A	522	Hypothetical methylmalonyl-COA decarboxylase ALPH;	97.21
1on3_A	523	Methylmalonyl-COA carboxyltransferase 12S subunit;	97.2
2bzr_A	548	Propionyl-COA carboxylase beta chain 5; fatty acid	97.06
3u9r_B	555	MCC beta, methylcrotonyl-COA carboxylase, beta-sub	97.03
1vrg_A	527	Propionyl-COA carboxylase, beta subunit; TM0716, s	96.68
1x0u_A	522	Hypothetical methylmalonyl-COA decarboxylase ALPH;	96.54
1vrg_A	527	Propionyl-COA carboxylase, beta subunit; TM0716, s	96.38
1pix_A	587	Glutaconyl-COA decarboxylase A subunit; biotin-dep	96.23
1on3_A	523	Methylmalonyl-COA carboxyltransferase 12S subunit;	96.14
3gf3_A	588	Glutaconyl-COA decarboxylase subunit A; sodium ION	95.89
2bzr_A	548	Propionyl-COA carboxylase beta chain 5; fatty acid	95.79
3iav_A	530	Propionyl-COA carboxylase complex B subunit; accas	95.43
3n6r_B	531	Propionyl-COA carboxylase, beta subunit; protein c	95.15
3u9r_B	555	MCC beta, methylcrotonyl-COA carboxylase, beta-sub	94.09
3trr_A	256	Probable enoyl-COA hydratase/isomerase; ssgcid, st	93.6
3gf3_A	588	Glutaconyl-COA decarboxylase subunit A; sodium ION	93.55
3h81_A	278	Enoyl-COA hydratase ECHA8; niaid, decode, infectio	93.45
4f47_A	278	Enoyl-COA hydratase ECHA19; ssgcid, seattle struct	93.02
3tlf_A	274	Enoyl-COA hydratase/isomerase; structural genomics	92.95
3gow_A	254	PAAG, probable enoyl-COA hydratase; the spiral fol	92.81
3kqf_A	265	Enoyl-COA hydratase/isomerase family protein; IDP0	92.79
3rsi_A	265	Putative enoyl-COA hydratase/isomerase; structural	92.77
4fzw_A	258	2,3-dehydroadipyl-COA hydratase; structural genomi	92.55
3l3s_A	263	Enoyl-COA hydratase/isomerase family protein; crot	92.31
3moy_A	263	Probable enoyl-COA hydratase; ssgcid, seattle stru	92.27
3qxi_A	265	Enoyl-COA hydratase ECHA1; structural genomics, se	91.78
3g64_A	279	Putative enoyl-COA hydratase; alpha-beta structure	91.64
1mj3_A	260	Enoyl-COA hydratase, mitochondrial; homohexamer, l	91.37
3hrx_A	254	Probable enoyl-COA hydratase; the spiral fold, the	91.2
3p5m_A	255	Enoyl-COA hydratase/isomerase; seattle structural	91.08
4fzw_C	274	1,2-epoxyphenylacetyl-COA isomerase; structural ge	90.41
1uiy_A	253	Enoyl-COA hydratase; lyase, beta-oxidation, croton	90.27
3pea_A	261	Enoyl-COA hydratase/isomerase family protein; stru	90.12
3myb_A	286	Enoyl-COA hydratase; ssgcid, struct genomics, seat	90.12
3oc7_A	267	Enoyl-COA hydratase; seattle structural genomics c	90.1
1nzy_A	269	Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogen	90.08
1hzd_A	272	AUH, AU-binding protein/enoyl-COA hydratase; RNA-b	90.0
3hin_A	275	Putative 3-hydroxybutyryl-COA dehydratase; structu	89.99
3r9t_A	267	ECHA1_1; ssgcid, seattle structural genomics cente	89.9
3r9q_A	262	Enoyl-COA hydratase/isomerase; ssgcid, lyase,isome	89.46
3swx_A	265	Probable enoyl-COA hydratase/isomerase; structural	89.44
3qmj_A	256	Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid,	89.33
1dci_A	275	Dienoyl-COA isomerase; lyase; 1.50A {Rattus norveg	89.3
2ppy_A	265	Enoyl-COA hydratase; beta-oxidation, fatty acid me	89.09
2ej5_A	257	Enoyl-COA hydratase subunit II; structural genomic	88.69
3ju1_A	407	Enoyl-COA hydratase/isomerase family protein; alph	88.57
2pbp_A	258	Enoyl-COA hydratase subunit I; B-oxidation, struct	88.35
2gtr_A	261	CDY-like, chromodomain Y-like protein; structural	88.21
3lke_A	263	Enoyl-COA hydratase; nysgrc, target 112 structural	88.09
2a7k_A	250	CARB; crotonase, antibiotic, beta-lactam, biosynth	88.07
2vx2_A	287	Enoyl-COA hydratase domain-containing protein 3; i	88.07
4di1_A	277	Enoyl-COA hydratase ECHA17; structural genomics, s	88.03
3qxz_A	265	Enoyl-COA hydratase/isomerase; structural genomics	87.47
4hdt_A	353	3-hydroxyisobutyryl-COA hydrolase; ssgcid, carniti	87.26
2x24_A	793	Acetyl-COA carboxylase; fatty acid biosynthesis, l	87.15
3k8x_A	758	Acetyl-COA carboxylase; transferase, carboxyltrans	86.63
3k8x_A	758	Acetyl-COA carboxylase; transferase, carboxyltrans	86.48
2fbm_A	291	Y chromosome chromodomain protein 1, telomeric IS;	86.13
3i47_A	268	Enoyl COA hydratase/isomerase (crotonase); structu	86.11
2q35_A	243	CURF; crotonase, lyase; 1.65A {Lyngbya majuscula}	85.18
3h0u_A	289	Putative enoyl-COA hydratase; structural genomics,	85.06
3m6n_A	305	RPFF protein; enoyl-COA hydratase, lyase; 1.80A {X	84.68
3pe8_A	256	Enoyl-COA hydratase; emerald biostructures, struct	84.29
3fdu_A	266	Putative enoyl-COA hydratase/isomerase; structural	84.26
3rrv_A	276	Enoyl-COA hydratase/isomerase; structural genomics	84.19
2x24_A	793	Acetyl-COA carboxylase; fatty acid biosynthesis, l	83.53
3qre_A	298	Enoyl-COA hydratase, ECHA12_1; structural genomics	83.46
3sll_A	290	Probable enoyl-COA hydratase/isomerase; structural	83.36
1ef8_A	261	Methylmalonyl COA decarboxylase; lyase; 1.85A {Esc	81.78
2j5i_A	276	P-hydroxycinnamoyl COA hydratase/lyase; vanillin,	81.42
2f6q_A	280	Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxis	80.95
3hp0_A	267	Putative polyketide biosynthesis enoyl-COA hydrata	80.61

>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=4.3e-62  Score=467.57  Aligned_cols=296  Identities=33%  Similarity=0.568  Sum_probs=264.9

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      .+.|+++++|+|++||||||+++|+||.+|+.+|.++|+.++.|++||+|||||+| ++||+|+|++++...... +...
T Consensus         8 ~e~vl~e~~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~-~~~~   86 (353)
T 4hdt_A            8 NEDVLVNVEGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKA-DGAE   86 (353)
T ss_dssp             CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHT-TSHH
T ss_pred             CCcEEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccch-hhHH
Confidence            46799999999999999999999999999999999999999999999999999999 899999999998765333 3355


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHH
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGE  191 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~  191 (350)
                      ...++...++++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|..++
T Consensus        87 ~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g~~a~  166 (353)
T 4hdt_A           87 ARRFWFDEYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPGKLGL  166 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSSTTHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhhHHHH
Confidence            67788889999999999999999999999999999999999999999999999999999999999999999999997799


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCC
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT  271 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~  271 (350)
                      +|+|||++++|+||+++||||+|||+++|++..+.+..      ..+...+..+..  ......+......|++||+.++
T Consensus       167 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~------~~~~~~l~~~~~--~~~~~~l~~~~~~i~~~f~~~~  238 (353)
T 4hdt_A          167 HAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIA------DGVDAALAAHAQ--EPPASPLAEQRSWIDECYTGDT  238 (353)
T ss_dssp             HHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHH------HCHHHHHHHHCB--CCCCCHHHHTHHHHHHHTTCSS
T ss_pred             HHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHH------hchhHHHHHhcc--cCCccchHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999887776642      112333333333  2233445566889999999999


Q ss_pred             HHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCC-CHHHHHHHHHHHHhhhhhccCC
Q 018834          272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNG-GQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       272 ~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~-~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +++|++.|++.    ..+|++++.+.+.++||+|+++|+++++++.+   . |++++|++|++++..++.+||-
T Consensus       239 ~~~i~~~L~~~----~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~---~~sl~e~l~~E~~~~~~~~~s~D~  305 (353)
T 4hdt_A          239 VADIIAALRAH----DAPAAGEAADLIATRSPIALSVTLESVRRAAK---LQSLEDTLRQEYRVSCASLKSHDL  305 (353)
T ss_dssp             HHHHHHHHHHH----CSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTT---CCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHhc----ccHHHHHHHHHHHhcCcHHHHHHHHHHHHhcc---CCCHHHHHHHHHHHHHHHhCCchH
Confidence            99999999876    67999999999999999999999999999988   5 8999999999999999998874

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}

Probab=100.00  E-value=1.2e-59  Score=457.76  Aligned_cols=307  Identities=28%  Similarity=0.478  Sum_probs=267.3

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcC---
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQG---  107 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~---  107 (350)
                      +++.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.| ++||+|+|++++......+   
T Consensus        40 ~~~~v~~~~~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~  119 (407)
T 3ju1_A           40 VFQTLATASGKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQ  119 (407)
T ss_dssp             EEEEEECTTSCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSS
T ss_pred             ccceEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhcccccccc
Confidence            456788889999999999999999999999999999999999999999999999999 8999999999987543211   


Q ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH
Q 018834          108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG  187 (350)
Q Consensus       108 ~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g  187 (350)
                      .......++...+.++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus       120 ~~~~~~~~~~~~~~l~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g  199 (407)
T 3ju1_A          120 VTEVAKVFFEEEYRLDYLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG  199 (407)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST
T ss_pred             cHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH
Confidence            23456678888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCC-H----HHHHHHHHHHhccC--CCCcchHHHHH
Q 018834          188 HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDD-P----SVIEACLEKYSDLV--YPDKNSVIHRI  260 (350)
Q Consensus       188 ~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~-~----~~i~~~~~~~~~~~--~~~~~~~~~~~  260 (350)
                      ..+++|+|||++|+|+||+++|||++|||++++.++.+.|.++.+.. +    ..+....+.+....  ......+....
T Consensus       200 ~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~~  279 (407)
T 3ju1_A          200 KMGLFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAESQ  279 (407)
T ss_dssp             THHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHTH
T ss_pred             HHHHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHHH
Confidence            55999999999999999999999999999999998888876655432 1    12333333332221  22334455678


Q ss_pred             HHHHHhcCcCCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhh
Q 018834          261 DIVDKCFGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVR  340 (350)
Q Consensus       261 ~~i~~~f~~~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~  340 (350)
                      ..|++||+ +++++|++.|++...  .++|++++++.|.++||+|+++|+++++++..   .+++++|++|++++..++.
T Consensus       280 ~~I~~~f~-~sv~~i~~~L~~~~~--~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~---~~l~~~l~~E~~~~~~~~~  353 (407)
T 3ju1_A          280 EMIDRLMA-GSLTDIVTRMSTLST--DEAWLSKACATMLAGSPISWHLAYIQTQLGTK---LSLAQCFKWELTVSVNVCA  353 (407)
T ss_dssp             HHHHHHTC-SCHHHHHHHHHHCCC--SCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTC---SCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhc-CCHHHHHHHHHhccc--ccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhC
Confidence            99999999 999999999987432  47999999999999999999999999999999   8999999999999999999


Q ss_pred             ccCC
Q 018834          341 RHGG  344 (350)
Q Consensus       341 ~~~~  344 (350)
                      ++|-
T Consensus       354 s~D~  357 (407)
T 3ju1_A          354 KGDF  357 (407)
T ss_dssp             HSSH
T ss_pred             CHHH
Confidence            8874

>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}

Probab=100.00  E-value=1.6e-58  Score=444.85  Aligned_cols=306  Identities=38%  Similarity=0.631  Sum_probs=270.6

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCCh
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKL  109 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~  109 (350)
                      +.++.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||||.| ++||+|+|++++......+. 
T Consensus         3 ~~~~~v~~~~~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~-   81 (363)
T 3bpt_A            3 DAAEEVLLGKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQ-   81 (363)
T ss_dssp             CCCCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSC-
T ss_pred             CCCcceEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhccccc-
Confidence            3455799999999999999999999999999999999999999999999999999998 99999999999865321111 


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834          110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                      .....++...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus        82 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~~  161 (363)
T 3bpt_A           82 KIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKL  161 (363)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTTH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHHH
Confidence            11234566667888999999999999999999999999999999999999999999999999999999999999999978


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCC---CCcchHHHHHHHHHHh
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVY---PDKNSVIHRIDIVDKC  266 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~i~~~  266 (350)
                      +++|+|||++++|+||+++||||+|+|++++.+..+.+.++...++..+...++.+.....   +....+......|++|
T Consensus       162 a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~  241 (363)
T 3bpt_A          162 GYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLALKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINSC  241 (363)
T ss_dssp             HHHHHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHHH
T ss_pred             HHHHHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHhcccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHHH
Confidence            9999999999999999999999999999999887777777777788889988888875321   1122333457899999


Q ss_pred             cCcCCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       267 f~~~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      |+.++++++++.+++.    ..+|+++..+.+.++||.|+++|+++++++..   .+++++|++|++++..++.++|-
T Consensus       242 f~~~~~~ei~~al~~~----~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~---~~l~~~l~~E~~~~~~~~~s~D~  312 (363)
T 3bpt_A          242 FSANTVEEIIENLQQD----GSSFALEQLKVINKMSPTSLKITLRQLMEGSS---KTLQEVLTMEYRLSQACMRGHDF  312 (363)
T ss_dssp             TTSSSHHHHHHHHHHH----CCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHTSSHH
T ss_pred             hCCCCHHHHHHHHhcc----ChHHHHHHHHHHHhCCchHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHhcCccH
Confidence            9999999999999875    56899999999999999999999999999999   89999999999999999888763

>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=100.00  E-value=3.7e-56  Score=413.13  Aligned_cols=258  Identities=22%  Similarity=0.285  Sum_probs=218.7

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      .+++.|+++.+++|++||||||+++|+||.+|+.+|.++|++++.|++|++|||||.|++||+|+|++++.........+
T Consensus        12 sM~e~il~~~~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~   91 (274)
T 4fzw_C           12 SMMEFILSHVEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPD   91 (274)
T ss_dssp             ----CEEEEEETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCC
T ss_pred             cccccEEEEEECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchH
Confidence            36678999999999999999999999999999999999999999999999999999999999999999876443333334


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....+.+..+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. 
T Consensus        92 ~~~~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~  171 (274)
T 4fzw_C           92 LGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRAR  171 (274)
T ss_dssp             HHHHHHHTHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHH
Confidence            4455556667889999999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f  267 (350)
                      +++|+|||++++|+||+++||||+|||++++.+.+..+ .+++..++.++..+|+.++........... .+...+..++
T Consensus       172 A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~  251 (274)
T 4fzw_C          172 AMGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLGLIKQAINSAETNTLDTQLDLERDYQRLAG  251 (274)
T ss_dssp             HHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHhCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999988755555 688899999999999999876654433333 3466677777


Q ss_pred             -CcCCHHHHHHHHhccCCCCCc
Q 018834          268 -GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 -~~~~~~ei~~~lek~~~~~~~  288 (350)
                       +.|..|++.+|+|||+|+|.+
T Consensus       252 ~s~d~~Egv~AF~eKR~P~f~G  273 (274)
T 4fzw_C          252 RSADYREGVSAFLAKRSPQFTG  273 (274)
T ss_dssp             TSHHHHHHHHHHHC-CCCCCCC
T ss_pred             cCHHHHHHHHHHhCCCCCCCCC
Confidence             567777888999999998864

>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}

Probab=100.00  E-value=6.1e-56  Score=407.79  Aligned_cols=248  Identities=25%  Similarity=0.297  Sum_probs=220.4

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      |++|++|+|++||||||+++|+||.+|+.+|.++|++++.|++|++|||||.|++||+|+|++++...     ......+
T Consensus         2 vl~E~~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-----~~~~~~~   76 (254)
T 3hrx_A            2 VLKERQDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDR-----KPDYEAH   76 (254)
T ss_dssp             EEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTS-----CCCHHHH
T ss_pred             eEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhccc-----chhhHHH
Confidence            78999999999999999999999999999999999999999999999999999999999999987532     1223455


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA  194 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~  194 (350)
                      ++..+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|+
T Consensus        77 ~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~ll  156 (254)
T 3hrx_A           77 LRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELL  156 (254)
T ss_dssp             THHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHh
Confidence            67778889999999999999999999999999999999999999999999999999999999999999999988 99999


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-CcCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-GLDT  271 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-~~~~  271 (350)
                      +||++++|+||+++||||++||++++.+....+ .+++..++.++...|+.++.......... ..+...+..+| +.|.
T Consensus       157 ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s~d~  236 (254)
T 3hrx_A          157 LLSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYALTKKLLLETYRLSLTEALALEAVLQGQAGQTQDH  236 (254)
T ss_dssp             HHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHH
T ss_pred             hcCcccCHHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHH
Confidence            999999999999999999999999987655544 68899999999999999887665443333 33466777788 5677


Q ss_pred             HHHHHHHHhccCCCCCc
Q 018834          272 VEEIIDSLESEASLIND  288 (350)
Q Consensus       272 ~~ei~~~lek~~~~~~~  288 (350)
                      .|++.+|+|||+|+|.+
T Consensus       237 ~Eg~~AF~eKR~P~f~G  253 (254)
T 3hrx_A          237 EEGVRAFREKRPPRFQG  253 (254)
T ss_dssp             HHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHhCCCCCCCCC
Confidence            78888999999998864

>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=100.00  E-value=2.8e-55  Score=404.00  Aligned_cols=250  Identities=21%  Similarity=0.270  Sum_probs=219.6

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|+++++|+|++||||||+++|+||.+|+.+|.++++.++.|++|++|||||.|++||+|+|++++...    .  ..
T Consensus         4 ms~l~ve~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~----~--~~   77 (258)
T 4fzw_A            4 MSELIVSRQQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEK----D--LA   77 (258)
T ss_dssp             -CEEEEEEETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTC----C--HH
T ss_pred             CCcEEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccc----h--hh
Confidence            34589999999999999999999999999999999999999999999999999999999999999987632    1  12


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        78 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~  157 (258)
T 4fzw_A           78 ATLNDTRPQLWARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLAS  157 (258)
T ss_dssp             HHHTCSHHHHHHHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHH
T ss_pred             hHHHhHHHHHHHHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHH
Confidence            23334456788889999999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~  268 (350)
                      +|++||++++|+||+++||||+|||++++.+....+ .+++..+|.++..+|+.++......... ...+...+..++ +
T Consensus       158 ~llltg~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s  237 (258)
T 4fzw_A          158 KMVLSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQAAKQALRQSQEVALQAGLAQERQLFTLLAAT  237 (258)
T ss_dssp             HHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHcCCcCcHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999987655554 6889999999999999998766544333 333566777888 4


Q ss_pred             cCCHHHHHHHHhccCCCCCc
Q 018834          269 LDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~~~  288 (350)
                      .|..|++.+|+||++|+|.+
T Consensus       238 ~d~~Eg~~AF~eKR~P~f~G  257 (258)
T 4fzw_A          238 EDRHEGISAFLQKRTPDFKG  257 (258)
T ss_dssp             HHHHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHHHHhCCCCCCCCC
Confidence            56777888999999998854

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}

Probab=100.00  E-value=4.8e-53  Score=393.53  Aligned_cols=256  Identities=22%  Similarity=0.246  Sum_probs=225.7

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++............
T Consensus        16 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~   95 (279)
T 3g64_A           16 WRHLRVEITDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTARL   95 (279)
T ss_dssp             CSSEEEEEETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHHH
T ss_pred             CCeEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhHH
Confidence            67899999999999999999999999999999999999999999999999999999999999999998765433333344


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEeccccccccc-CCCchHHHHhhccHHH-H
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFH-PDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~-P~~G~s~~L~rl~g~~-a  190 (350)
                      ..+.+..+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |++|++++|+|++|.. +
T Consensus        96 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~~A  175 (279)
T 3g64_A           96 LDFNRMTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLGHA  175 (279)
T ss_dssp             HHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHHHH
Confidence            4566667889999999999999999999999999999999999999999999999999999 9999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f-  267 (350)
                      ++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..++.++..+|+.++........... .+...+..++ 
T Consensus       176 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~  255 (279)
T 3g64_A          176 TRLLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAHAQTKALLTAELDMPLAAAVELDASTQALLMT  255 (279)
T ss_dssp             HHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999988755554 788899999999999999876554433333 3466777788 


Q ss_pred             CcCCHHHHHHHHhccCCCCCc
Q 018834          268 GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~~  288 (350)
                      +.+..|.+.+|++|++|+|.+
T Consensus       256 s~d~~eg~~af~ekr~p~f~g  276 (279)
T 3g64_A          256 GEDYAEFHAAFTEKRPPKWQG  276 (279)
T ss_dssp             SHHHHHHHHHHHTTSCCCCCC
T ss_pred             CHHHHHHHHHHhcCCCCCCCC
Confidence            467777788899999988764

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}

Probab=100.00  E-value=7e-53  Score=388.71  Aligned_cols=254  Identities=21%  Similarity=0.285  Sum_probs=220.2

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ++++.|.++++++|++||||||++ |+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++...   ....
T Consensus         3 ~m~~~v~~~~~~~v~~itlnrp~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~---~~~~   78 (261)
T 3pea_A            3 AMLKFLSVRVEDHIAVATLNHAPA-NAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSV---TEAK   78 (261)
T ss_dssp             -CCSSEEEEEETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTT---CCHH
T ss_pred             ccccceEEEEECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhc---Cchh
Confidence            456789999999999999999999 999999999999999999999999999999999999999999987642   2223


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. 
T Consensus        79 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~  158 (261)
T 3pea_A           79 QATELAQLGQVTFERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAK  158 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHH
Confidence            3344445556688889999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f  267 (350)
                      +++|++||++++|+||+++||||+++|++++.+....+ .+++..+|.++..+|+.++.......... ..+...+..++
T Consensus       159 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~  238 (261)
T 3pea_A          159 ACEMMLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATARAVLELLQTTKSSHYYEGVQREAQIFGEVF  238 (261)
T ss_dssp             HHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999887655444 78899999999999999987654322222 23456667777


Q ss_pred             -CcCCHHHHHHHHhccCCCCCc
Q 018834          268 -GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 -~~~~~~ei~~~lek~~~~~~~  288 (350)
                       +.+..|.+.+|++|++|.|.+
T Consensus       239 ~s~d~~eg~~af~ekr~P~f~g  260 (261)
T 3pea_A          239 TSEDGREGVAAFLEKRKPSFSG  260 (261)
T ss_dssp             HSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCCCC
Confidence             567778888999999998754

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0

Probab=100.00  E-value=1.7e-52  Score=387.33  Aligned_cols=254  Identities=18%  Similarity=0.277  Sum_probs=221.4

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|++||+|||||.|++||+|+|++++.... .......
T Consensus         3 ~~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~~~~   81 (268)
T 3i47_A            3 LSDLLYEIQDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMA-NFTEEEN   81 (268)
T ss_dssp             CCSEEEEEETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHH-TCCHHHH
T ss_pred             CCEEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccc-cccHHHH
Confidence            457999999999999999999999999999999999999999999999999999999999999999987542 2223333


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|+|++|.. ++
T Consensus        82 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~A~  160 (268)
T 3i47_A           82 LEDSLVLGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGERAAK  160 (268)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHHHHH
Confidence            4455667788999999999999999999999999999999999999999999999999999999988 788999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch--HHHHHHHHHHhc-
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS--VIHRIDIVDKCF-  267 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~i~~~f-  267 (350)
                      +|++||++++|+||+++||||+|+|++++.+.+..+ .+++..+|.++..+|+.++.........  ...+...+..++ 
T Consensus       161 ~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~  240 (268)
T 3i47_A          161 MLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEAVKNSKQLAQYVANKKIDEELVRYTASLIAHKRV  240 (268)
T ss_dssp             HHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHhc
Confidence            999999999999999999999999999988755544 7889999999999999998765544333  233456677777 


Q ss_pred             CcCCHHHHHHHHhccCCCCCc
Q 018834          268 GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~~  288 (350)
                      +.+..|++.+|+||++|+|.+
T Consensus       241 s~d~~eg~~AF~ekR~p~f~~  261 (268)
T 3i47_A          241 SDEGQEGLKAFLNKEIPNWNE  261 (268)
T ss_dssp             SHHHHHHHHHHHHTCCCTTC-
T ss_pred             CHHHHHHHHHHHcCCCCCCCC
Confidence            667778888999999998753

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-52  Score=387.91  Aligned_cols=252  Identities=21%  Similarity=0.324  Sum_probs=223.8

Q ss_pred             CCcEEEE-EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChH
Q 018834           33 CNQVLVE-GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        33 ~~~v~~~-~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ++.|.++ .+++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++...    ...
T Consensus         7 ~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~~~   82 (265)
T 3kqf_A            7 LQNISVDYATPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGM----NEE   82 (265)
T ss_dssp             CCSEEEECCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTC----CHH
T ss_pred             CCeEEEEEeeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhcc----CHH
Confidence            4679999 8999999999999999999999999999999999999999999999999 999999999988642    344


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....++...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. 
T Consensus        83 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~  162 (265)
T 3kqf_A           83 QVRHAVSMIRTTMEMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGR  162 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHHH
Confidence            5566777788899999999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f  267 (350)
                      +++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..+|.++..+|+.++.......... ..+...+..+|
T Consensus       163 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~  242 (265)
T 3kqf_A          163 AKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAVRLAKEAISNGIQVDLHTGLQMEKQAYEGVI  242 (265)
T ss_dssp             HHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999987655544 68889999999999999987655443333 33466777788


Q ss_pred             -CcCCHHHHHHHHhccCCCCCc
Q 018834          268 -GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 -~~~~~~ei~~~lek~~~~~~~  288 (350)
                       +.+..|.+.+|++|++|+|.+
T Consensus       243 ~s~d~~eg~~af~ekr~p~f~g  264 (265)
T 3kqf_A          243 HTKDRLEGLQAFKEKRTPMYKG  264 (265)
T ss_dssp             TCHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCCCC
Confidence             567778888999999988753

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}

Probab=100.00  E-value=3.9e-52  Score=382.46  Aligned_cols=247  Identities=21%  Similarity=0.266  Sum_probs=216.0

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      .++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++..       . 
T Consensus         4 ~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~-------~-   75 (255)
T 3p5m_A            4 SMNGISVEHDGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDT-------A-   75 (255)
T ss_dssp             CBTTEEEEEETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CH-------H-
T ss_pred             CCceEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcc-------h-
Confidence            34569999999999999999999999999999999999999999999999999999999999999998752       1 


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                        .+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        76 --~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A  153 (255)
T 3p5m_A           76 --GAADAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRART  153 (255)
T ss_dssp             --HHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHH
T ss_pred             --HHHHHHHHHHHHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHH
Confidence              3455566788899999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-  267 (350)
                      ++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..++.++..+|+.++.......... ..+...+..++ 
T Consensus       154 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~  233 (255)
T 3p5m_A          154 SRMAMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFGWTKRALAAATLAELEPVQAIEAEGQLALVE  233 (255)
T ss_dssp             HHHHHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHcCCCcCHHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999988755555 68889999999999999987654443333 33466777888 


Q ss_pred             CcCCHHHHHHHHhccCCCCCc
Q 018834          268 GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~~  288 (350)
                      +.+..|.+.+|++|++|+|.+
T Consensus       234 s~d~~eg~~af~ekr~p~f~g  254 (255)
T 3p5m_A          234 TADFREGARAFRERRTPNFRG  254 (255)
T ss_dssp             SHHHHHHHHHHHTTSCCCCCC
T ss_pred             CHHHHHHHHHHHcCCCCCCCC
Confidence            456777788889999988753

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}

Probab=100.00  E-value=2.3e-52  Score=386.24  Aligned_cols=252  Identities=16%  Similarity=0.215  Sum_probs=205.8

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++........... 
T Consensus         4 ~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~-   82 (266)
T 3fdu_A            4 HPHLNANLEGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPNAGP-   82 (266)
T ss_dssp             CTTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCCCSC-
T ss_pred             CCeEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccchhh-
Confidence            4579999999999999999999999999999999999999999999999999999999999999999873211111100 


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                       .+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        83 -~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~  161 (266)
T 3fdu_A           83 -AGQVPPFVLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAA  161 (266)
T ss_dssp             -GGGSHHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHHH
T ss_pred             -HHHHHHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhCHHHHH
Confidence             1233455678889999999999999999999999999999999999999999999999999999999999999998 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-Cc
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-GL  269 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-~~  269 (350)
                      +|++||++++|+||+++||||+++|  ++.+ +.+.+.+++..+|.++..+|+.++............+...+..++ +.
T Consensus       162 ~l~ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~l~~~l~~e~~~~~~~~~s~  239 (266)
T 3fdu_A          162 ELLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLASLKQTKALMKHDLDQIIECIDHEAEIFMQRVQSP  239 (266)
T ss_dssp             HHHHHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhCCH
Confidence            9999999999999999999999999  6655 445557889999999999999988643111111222355677777 46


Q ss_pred             CCHHHHHHHHhccCCCCCc
Q 018834          270 DTVEEIIDSLESEASLIND  288 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~~  288 (350)
                      +..|++.+|++|++|.|..
T Consensus       240 d~~eg~~aF~ekR~p~~~~  258 (266)
T 3fdu_A          240 EMLEAVQAFMQKRQPDFSQ  258 (266)
T ss_dssp             HHHHHHHHHC---------
T ss_pred             HHHHHHHHHHcCCCCCCCC
Confidence            6777788889999887653

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}

Probab=100.00  E-value=6e-52  Score=387.82  Aligned_cols=257  Identities=19%  Similarity=0.209  Sum_probs=216.9

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCC---
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK---  108 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---  108 (350)
                      +...|.++.+++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++........   
T Consensus        22 m~~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~  101 (290)
T 3sll_A           22 MSFVLVDRPRPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQ  101 (290)
T ss_dssp             -CCEEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCH
T ss_pred             CCeEEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccc
Confidence            44579999999999999999999999999999999999999999999999999999999999999998864321111   


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCC-CchHHHHhhccH
Q 018834          109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPD-AGASFYLSHLPG  187 (350)
Q Consensus       109 ~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~-~G~s~~L~rl~g  187 (350)
                      ......+....+.++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +|++++|+|++|
T Consensus       102 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG  181 (290)
T 3sll_A          102 PTIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIG  181 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhC
Confidence            1224556777788999999999999999999999999999999999999999999999999999999 999999999999


Q ss_pred             HH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCC-CCcchHH-HHHHHH
Q 018834          188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVY-PDKNSVI-HRIDIV  263 (350)
Q Consensus       188 ~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~i  263 (350)
                      .. +++|++||++++|+||+++||||+|+|++++.+.+.. +.+++..+|.++..+|+.++.... ....... .+...+
T Consensus       182 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~l~~~l~~e~~~~  261 (290)
T 3sll_A          182 TSRASDIMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPGIELTKRTIWSGLDAASLESHMHQEGLGQ  261 (290)
T ss_dssp             HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHH
Confidence            88 9999999999999999999999999999998765444 478889999999999999987655 4433333 345566


Q ss_pred             HHhc--CcCCHHHHHHHHhccCCCCCc
Q 018834          264 DKCF--GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       264 ~~~f--~~~~~~ei~~~lek~~~~~~~  288 (350)
                      ..++  +.+..|++.+|++|++|+|.+
T Consensus       262 ~~~~~~s~d~~eg~~AFlekR~P~f~g  288 (290)
T 3sll_A          262 LYVRLLTDNFEEATAARKEKRPAEFRD  288 (290)
T ss_dssp             HHHHHHCCHHHHHHHHHHTTSCCCCCS
T ss_pred             HHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence            6776  567778888999999988753

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.3e-52  Score=387.54  Aligned_cols=248  Identities=22%  Similarity=0.230  Sum_probs=216.0

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++|+.+  |+++++|||+|.|++||+|+|++++..    ......
T Consensus        15 ~~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~----~~~~~~   88 (275)
T 3hin_A           15 PSTLVVDTVGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRE----RDATEG   88 (275)
T ss_dssp             GGGEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCC----CCHHHH
T ss_pred             CCeEEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhc----cChhhH
Confidence            35799999999999999999999999999999999999998  679999999999999999999998753    233334


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        89 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~  168 (275)
T 3hin_A           89 LVHSQTWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARMA  168 (275)
T ss_dssp             HHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHH
Confidence            45566777888999999999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~  268 (350)
                      +|++||++++|+||+++||||+|||++++.+.+..+ .+++..+|.++..+|+.++......... +..+...+..++ +
T Consensus       169 ~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s  248 (275)
T 3hin_A          169 DMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNFAVLQALPMIAEANPQTGLLMESLMATVAQSD  248 (275)
T ss_dssp             HHHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSCHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHcCCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999987655544 6888999999999999887654333332 223455666777 5


Q ss_pred             cCCHHHHHHHHhccCCCC
Q 018834          269 LDTVEEIIDSLESEASLI  286 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~  286 (350)
                      .+..|++.+|++|++|+|
T Consensus       249 ~d~~eg~~AF~ekR~p~f  266 (275)
T 3hin_A          249 QEAKTRIRAFLDHKTAKV  266 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCCCCCC
Confidence            677888889999997655

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*

Probab=100.00  E-value=9.9e-52  Score=382.79  Aligned_cols=254  Identities=18%  Similarity=0.187  Sum_probs=216.4

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhh-cCChHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-QGKLEEC  112 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~~~~~~~  112 (350)
                      +.|.++.+++|++||||||+++|+||.+|+.+|.++|++++.|+++++|||||.|++||+|+|++++..... .+..+..
T Consensus         3 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~   82 (269)
T 1nzy_A            3 EAIGHRVEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRDHF   82 (269)
T ss_dssp             SSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHHHH
T ss_pred             ceEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccChHHHH
Confidence            468899999999999999999999999999999999999999999999999999999999999998743100 0011111


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..++...++++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        83 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~  162 (269)
T 1nzy_A           83 RIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRRAM  162 (269)
T ss_dssp             HHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhhHHHHH
Confidence            34555677888899999999999999999999999999999999999999999999999999999999999999987 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-~  268 (350)
                      +|++||++++|+||+++||||+++|++++.+.+.. +.+++..+|.++..+|+.++.......... ..+...+..++ +
T Consensus       163 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s  242 (269)
T 1nzy_A          163 ELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASVTH  242 (269)
T ss_dssp             HHHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcC
Confidence            99999999999999999999999998887765444 467888999999999999987554333322 23455666777 6


Q ss_pred             cCCHHHHHHHHhccCCCCC
Q 018834          269 LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~~  287 (350)
                      .+..+.+.++++|++|.|.
T Consensus       243 ~d~~egi~af~ekr~p~f~  261 (269)
T 1nzy_A          243 PHFMPCLTRFLDGHRADRP  261 (269)
T ss_dssp             TTHHHHHHHHHTTCCTTCC
T ss_pred             HHHHHHHHHHHhcCCCCCC
Confidence            6777888889999988765

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*

Probab=100.00  E-value=9.7e-52  Score=383.93  Aligned_cols=250  Identities=24%  Similarity=0.356  Sum_probs=216.1

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++...    .... 
T Consensus        24 ~~~v~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~~~-   98 (278)
T 3h81_A           24 YETILVERDQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADL----TFAD-   98 (278)
T ss_dssp             CSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTC----CHHH-
T ss_pred             CCeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhcc----Chhh-
Confidence            35799999999999999999999999999999999999999999999999999999999999999998642    1111 


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                       .++...+..+..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        99 -~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~  177 (278)
T 3h81_A           99 -AFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAM  177 (278)
T ss_dssp             -HHHHTTTGGGHHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHH
T ss_pred             -HHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHHH
Confidence             2222333336778999999999999999999999999999999999999999999999999999999999999987 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f-~  268 (350)
                      +|++||++++|+||+++||||+|+|++++.+.+. .+.+++..+|.++..+|+.++........... .+...+..+| +
T Consensus       178 ~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s  257 (278)
T 3h81_A          178 DLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAARMAKEAVNRAFESSLSEGLLYERRLFHSAFAT  257 (278)
T ss_dssp             HHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHhCCCcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999876544 44789999999999999999876554433333 3466777888 4


Q ss_pred             cCCHHHHHHHHhccCCCCCc
Q 018834          269 LDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~~~  288 (350)
                      .+..|++.+|++|++|.|.+
T Consensus       258 ~d~~eg~~AF~ekR~P~f~g  277 (278)
T 3h81_A          258 EDQSEGMAAFIEKRAPQFTH  277 (278)
T ss_dssp             HHHHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHHHHHcCCCCCCCC
Confidence            67777788889999988753

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}

Probab=100.00  E-value=1.4e-51  Score=379.35  Aligned_cols=249  Identities=27%  Similarity=0.340  Sum_probs=209.8

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||||.|++||+|+|++++....   ..+...
T Consensus         3 ~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~---~~~~~~   79 (257)
T 2ej5_A            3 ETIRYEVKGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEM---DHGDVL   79 (257)
T ss_dssp             SSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC----------CHHHHH
T ss_pred             CceEEEeECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhcc---chhHHH
Confidence            56899999999999999999999999999999999999999999999999999999999999999876421   111111


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      ..  ..++++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++
T Consensus        80 ~~--~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~  157 (257)
T 2ej5_A           80 RS--RYAPMMKALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALE  157 (257)
T ss_dssp             HH--THHHHHHHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred             HH--HHHHHHHHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHH
Confidence            11  256778889999999999999999999999999999999999999999999999999999999999999988 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-Cc
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-GL  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~~  269 (350)
                      |++||++++|+||+++||||+++|++++.+....+ .+++..+|.++..+|+.++......... ...+...+..++ +.
T Consensus       158 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~  237 (257)
T 2ej5_A          158 LAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAIGLIKRLLRESEETTFDRYLEREAECQRIAGLTS  237 (257)
T ss_dssp             HHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSH
T ss_pred             HHHhCCccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCh
Confidence            99999999999999999999999998887655444 6788899999999999887654333222 223455566677 56


Q ss_pred             CCHHHHHHHHhccCCCCC
Q 018834          270 DTVEEIIDSLESEASLIN  287 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~  287 (350)
                      +..+.+.++++|++|.|.
T Consensus       238 d~~eg~~af~ekr~p~~~  255 (257)
T 2ej5_A          238 DHREGVKAFFEKRKPLFQ  255 (257)
T ss_dssp             HHHHHHHHHTTTCCCCCC
T ss_pred             HHHHHHHHHhcCCCCCCC
Confidence            778888888999988764

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}

Probab=100.00  E-value=8.1e-52  Score=381.92  Aligned_cols=250  Identities=24%  Similarity=0.300  Sum_probs=217.1

Q ss_pred             CCcEEEEEeCC-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKAN-SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~-v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.|.++++++ |++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++...    ....
T Consensus         8 ~~~i~~~~~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~~~   83 (263)
T 3moy_A            8 YTTIATSRPVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTL----TPHQ   83 (263)
T ss_dssp             CSSEEEECCSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTC----CHHH
T ss_pred             CCeEEEEEeCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhcc----Cchh
Confidence            35699999998 999999999999999999999999999999999999999999999999999999988532    1111


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                        .+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        84 --~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A  161 (263)
T 3moy_A           84 --ARERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAKA  161 (263)
T ss_dssp             --HHHTTTTHHHHHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHHH
T ss_pred             --HHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHHH
Confidence              2233345677889999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-  267 (350)
                      ++|++||++++|+||+++||||+++|++++.+....+ .+++..+|.++..+|+.++.......... ..+...+..+| 
T Consensus       162 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~  241 (263)
T 3moy_A          162 MDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGRAVKDAINEAFERPLSAGMRYERDAFYAMFD  241 (263)
T ss_dssp             HHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHcCCCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999887654444 68889999999999999987655443333 33466778888 


Q ss_pred             CcCCHHHHHHHHhccCCCCCc
Q 018834          268 GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~~  288 (350)
                      +.+..|.+.+|++|++|.|.+
T Consensus       242 s~d~~eg~~AF~ekR~p~f~g  262 (263)
T 3moy_A          242 THDQTEGMTAFLEKRTPEFTD  262 (263)
T ss_dssp             SHHHHHHHHHHHTTSCCCCCC
T ss_pred             CHHHHHHHHHHHhCCCCCCCC
Confidence            467777788889999988753

>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A

Probab=100.00  E-value=4.1e-52  Score=385.66  Aligned_cols=253  Identities=19%  Similarity=0.260  Sum_probs=216.1

Q ss_pred             CCCcEEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           32 LCNQVLVEGKA-NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        32 ~~~~v~~~~~~-~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      .++.|.+++++ +|++||||||+ +|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++....  ....
T Consensus        11 ~~~~v~~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~~   87 (272)
T 3qk8_A           11 DFPSLRFEPGEHGVLNLVLDSPG-LNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETI--GDYE   87 (272)
T ss_dssp             GCTTEEEEECSTTEEEEEECCHH-HHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHH--HCHH
T ss_pred             CCCeEEEEEeCCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccc--cchH
Confidence            46789999986 89999999999 99999999999999999999999999999999999999999999986542  1223


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....++...++++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. 
T Consensus        88 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~  167 (272)
T 3qk8_A           88 GRIRIMREARDLVLNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAK  167 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHH
Confidence            3445667778899999999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-  267 (350)
                      +++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..++.++..+|+.++...................+| 
T Consensus       168 A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~e~~~~~  247 (272)
T 3qk8_A          168 AKYYLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIRWTKRSLNHWYRMFGPTFETSLGLEFLGFT  247 (272)
T ss_dssp             HHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhC
Confidence            99999999999999999999999999999987655444 7888999999999999887532211111222223334667 


Q ss_pred             CcCCHHHHHHHHhccCCCCC
Q 018834          268 GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~  287 (350)
                      +.|..|++.+|++|++|.|.
T Consensus       248 s~d~~eg~~Af~ekR~p~f~  267 (272)
T 3qk8_A          248 GPDVQEGLAAHRQKRPARFT  267 (272)
T ss_dssp             SSHHHHHHHHHHTTSCCCC-
T ss_pred             CHHHHHHHHHHHcCCCCCCC
Confidence            56667778888999988775

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}

Probab=100.00  E-value=1e-51  Score=381.84  Aligned_cols=253  Identities=19%  Similarity=0.250  Sum_probs=207.8

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.| ++++|||||.|++||+|+|++++........  ..
T Consensus         6 ~~~i~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~--~~   82 (267)
T 3hp0_A            6 YQTIKVRFQASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGR--KQ   82 (267)
T ss_dssp             CSSEEEEEETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTC--CS
T ss_pred             CceEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChH--HH
Confidence            35699999999999999999999999999999999999999986 5999999999999999999999875421111  11


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++|.. ++
T Consensus        83 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~A~  161 (267)
T 3hp0_A           83 ASSQEPLYDLWMKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQKAH  161 (267)
T ss_dssp             CCCCHHHHHHHHHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHHHH
Confidence            12334556788889999999999999999999999999999999999999999999999999986 67899999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-CcC
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-GLD  270 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-~~~  270 (350)
                      +|++||++++|+||+++||||+|+|+.+. ...+.+++++..+|.++..+|+.++............+.+.+..+| +.|
T Consensus       162 ellltg~~i~A~eA~~~GLV~~vv~~~~~-~~~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~e~~~~~~~~~s~d  240 (267)
T 3hp0_A          162 YMTLMTKPISVQEASEWGLIDAFDAESDV-LLRKHLLRLRRLNKKGIAHYKQFMSSLDHQVSRAKATALTANQDMFSDPQ  240 (267)
T ss_dssp             HHHHHCCCBCHHHHHHHTSSSCBCSCTTH-HHHHHHHHHTTSCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTSTT
T ss_pred             HHHHcCCCCCHHHHHHCCCcceecCCHHH-HHHHHHHHHHhCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhCCHH
Confidence            99999999999999999999999986542 2344456788899999999999988753321122223456677888 567


Q ss_pred             CHHHHHHHHhccCCCCCcHH
Q 018834          271 TVEEIIDSLESEASLINDPW  290 (350)
Q Consensus       271 ~~~ei~~~lek~~~~~~~~~  290 (350)
                      ..|++.+|+||++|.|++.|
T Consensus       241 ~~Eg~~AF~ekr~P~~~~~~  260 (267)
T 3hp0_A          241 NQMGIIRYVETGQFPWEDQE  260 (267)
T ss_dssp             HHHHHHHHTTSCCC------
T ss_pred             HHHHHHHHHhcCCCCCCCCC
Confidence            77778888999999887643

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A

Probab=100.00  E-value=2.2e-51  Score=378.87  Aligned_cols=252  Identities=18%  Similarity=0.266  Sum_probs=214.0

Q ss_pred             CCcEEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLn-rp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.|.++++++|++|||| ||+++|+||.+|+.+|.++|+.++.|+ +++|||+|.|++||+|+|++++......+....
T Consensus         4 ~~~i~~~~~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~   82 (261)
T 2gtr_A            4 YRDIVVRKQDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRE   82 (261)
T ss_dssp             CSSEEEEEETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHHH
T ss_pred             cceEEEEEeCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhhH
Confidence            456899999999999999 699999999999999999999999987 499999999999999999999864322221222


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...+....+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        83 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a  162 (261)
T 2gtr_A           83 STKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASA  162 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHHHH
Confidence            334555567788889999999999999999999999999999999999999999999999999999999999999987 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-  267 (350)
                      ++|++||++++|+||+++||||+++|++++.+.. +.+.+++..+|.++..+|+.++......... ...+...+..+| 
T Consensus       163 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~  242 (261)
T 2gtr_A          163 NEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWG  242 (261)
T ss_dssp             HHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999998887654 4457888999999999999988643222122 222345566677 


Q ss_pred             CcCCHHHHHHHHhccCCC
Q 018834          268 GLDTVEEIIDSLESEASL  285 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~  285 (350)
                      +.+..|++.++++|++|+
T Consensus       243 s~d~~eg~~af~ekr~P~  260 (261)
T 2gtr_A          243 SAQGMDSMLKYLQRKIDE  260 (261)
T ss_dssp             STTTTHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHccCCCC
Confidence            678889999999998664

>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}

Probab=100.00  E-value=1e-51  Score=381.31  Aligned_cols=252  Identities=19%  Similarity=0.247  Sum_probs=213.2

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCcc-ccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAF-CAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F-~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|+.| |+|+|++++...........
T Consensus         3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~~~~   82 (263)
T 3lke_A            3 LSYVHTEIQNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQSDVR   82 (263)
T ss_dssp             CCSEEEEECSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSSSHH
T ss_pred             CcEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCCHHH
Confidence            45699999999999999999999999999999999999999999999999999999999 99999999875222233445


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...++...+.++.+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        83 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG~~~A  162 (263)
T 3lke_A           83 LREVLHVLNHCVLEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQT  162 (263)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhCHHHH
Confidence            566778888999999999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccC-CCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSV-SEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~-~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f  267 (350)
                      ++|++||++++|+||+++||||+++| ++++.+.+..+ .+++..+|.++..+|+.++......... ...+...+..+|
T Consensus       163 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~  242 (263)
T 3lke_A          163 MNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIAATKKLLKGKAAEELKQQLEQETEELVALF  242 (263)
T ss_dssp             HHHHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHhCCCcCHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999 88887655444 6889999999999999988654322222 223466778888


Q ss_pred             Cc-CCHHHHHHHHhccCC
Q 018834          268 GL-DTVEEIIDSLESEAS  284 (350)
Q Consensus       268 ~~-~~~~ei~~~lek~~~  284 (350)
                      .. |..+.+.+++|++.+
T Consensus       243 ~s~d~~e~~~~~~~~~~~  260 (263)
T 3lke_A          243 KQTEIKKRLEALVEGHHH  260 (263)
T ss_dssp             TSHHHHHHHHHC------
T ss_pred             cCHHHHHHHHhhhccCCC
Confidence            54 555556666777644

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}

Probab=100.00  E-value=1.3e-52  Score=393.57  Aligned_cols=264  Identities=22%  Similarity=0.234  Sum_probs=183.0

Q ss_pred             CCCCcccCCCCcEEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHH
Q 018834           24 TSSSVTDDLCNQVLVEGKA-NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYH  102 (350)
Q Consensus        24 ~~~~~~~~~~~~v~~~~~~-~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~  102 (350)
                      +.||+..+.++.|.+++++ +|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||||.|++||+|+|++++..
T Consensus        19 ~~sm~~~~~~~~v~~~~~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~   98 (298)
T 3qre_A           19 PGSMSAADAQDAVLYEATPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADA   98 (298)
T ss_dssp             ---------CCSEEEEECTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-------
T ss_pred             CCCcCCCCCCCeEEEEEeCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhh
Confidence            3356655667889999999 999999999999999999999999999999999999999999999999999999999864


Q ss_pred             h--hhcCCh--HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCch
Q 018834          103 F--MNQGKL--EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA  178 (350)
Q Consensus       103 ~--~~~~~~--~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~  178 (350)
                      .  ......  .....+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~  178 (298)
T 3qre_A           99 AAGYDKTMAKAKDANLADLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGI  178 (298)
T ss_dssp             ----------------------CCTTGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSH
T ss_pred             ccccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhH
Confidence            1  111100  011122223345677899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccC-CHHHHHHHHHHHhccCCCCcc-
Q 018834          179 SFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTD-DPSVIEACLEKYSDLVYPDKN-  254 (350)
Q Consensus       179 s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~-~~~~i~~~~~~~~~~~~~~~~-  254 (350)
                      +++|+|++|.. +++|++||++++|+||+++||||+|+|++++.+.+..+ .+++.. +|.++..+|+.++........ 
T Consensus       179 ~~~L~r~vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~p~a~~~~K~~l~~~~~~~l~~  258 (298)
T 3qre_A          179 SWILPRLTSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSMAVIKRQVYGDATRDVVE  258 (298)
T ss_dssp             HHHHHHHSCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGGC----
T ss_pred             HHHHHHhcCHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHhhhcCCHHH
Confidence            99999999988 99999999999999999999999999999987655554 678887 999999999999876543322 


Q ss_pred             hHHHHHHHHHHhc-CcCCHHHHHHHHhccCCCCC
Q 018834          255 SVIHRIDIVDKCF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       255 ~~~~~~~~i~~~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      ....+...+..+| +.+..|++.+|++|++|+|.
T Consensus       259 ~~~~e~~~~~~~~~s~d~~Egv~AF~ekR~P~f~  292 (298)
T 3qre_A          259 ATSHAEVLLREAMPRPDVIEGIVSFLEKRPPQFP  292 (298)
T ss_dssp             ----------------------------------
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence            2223345566677 56777888899999988664

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}

Probab=100.00  E-value=2.7e-51  Score=382.54  Aligned_cols=249  Identities=20%  Similarity=0.259  Sum_probs=221.7

Q ss_pred             EEEEEe--CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           36 VLVEGK--ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        36 v~~~~~--~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      |.++++  ++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++..   ........
T Consensus        26 v~~~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~---~~~~~~~~  102 (286)
T 3myb_A           26 LLLQDRDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRA---EPSREYYE  102 (286)
T ss_dssp             SEEEEECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHS---SCCHHHHH
T ss_pred             EEEEEecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhc---cccHHHHH
Confidence            899999  9999999999999999999999999999999999999999999999999999999999864   23445556


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEF  192 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~  192 (350)
                      .++...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|.. +++
T Consensus       103 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~~A~~  181 (286)
T 3myb_A          103 KLFARCTDVMLAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRKAAFE  181 (286)
T ss_dssp             HHHHHHHHHHHHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHHHHHH
Confidence            777888899999999999999999999999999999999999999999999999999999 788999999999998 999


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-Cc
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF-GL  269 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f-~~  269 (350)
                      |++||++++|+||+++||||+|+|++++.+.+..+ .+++..+|.++..+|+.++........... .+...+..+| +.
T Consensus       182 llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~  261 (286)
T 3myb_A          182 MLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAVAMGKALFYRQIETDIESAYADAGTTMACNMMDP  261 (286)
T ss_dssp             HHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSH
T ss_pred             HHHcCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCH
Confidence            99999999999999999999999999987655544 678889999999999999876544433333 3466777777 66


Q ss_pred             CCHHHHHHHHhccCCCCCc
Q 018834          270 DTVEEIIDSLESEASLIND  288 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~~  288 (350)
                      +..+.+.+|++|++|+|.+
T Consensus       262 d~~egi~aFlekr~p~f~g  280 (286)
T 3myb_A          262 SALEGVSAFLEKRRPEWHT  280 (286)
T ss_dssp             HHHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHHHHccCCCCCCC
Confidence            7788888999999988753

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}

Probab=100.00  E-value=1e-51  Score=384.44  Aligned_cols=254  Identities=23%  Similarity=0.240  Sum_probs=204.1

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ...+.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++......   .
T Consensus        17 ~~~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~---~   93 (278)
T 4f47_A           17 ESGPDALVEQRGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPG---D   93 (278)
T ss_dssp             --CCSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC------------------
T ss_pred             CCCCceEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchh---h
Confidence            4557899999999999999999999999999999999999999999999999999999999999999998643111   1


Q ss_pred             HHHHHHHHHHHHHHHHh---cCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH
Q 018834          111 ECKDFFRTLYSFIYLLG---THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG  187 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~---~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g  187 (350)
                      ... .......++..+.   ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus        94 ~~~-~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG  172 (278)
T 4f47_A           94 SFK-DGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIP  172 (278)
T ss_dssp             --------CTTCBTTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSC
T ss_pred             hHH-HHHHHHHHHHHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhC
Confidence            100 0011223445566   999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHH
Q 018834          188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVD  264 (350)
Q Consensus       188 ~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~  264 (350)
                      .. +++|++||++++|+||+++||||+++|++++.+.+..+ .+++..++.++..+|+.++........... .+...+.
T Consensus       173 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~  252 (278)
T 4f47_A          173 YTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQAILRTIRETEGMHENEAFKIDTRIGI  252 (278)
T ss_dssp             HHHHHHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHG
T ss_pred             HHHHHHHHHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH
Confidence            88 99999999999999999999999999999987655444 688899999999999999876554433333 3456677


Q ss_pred             Hhc-CcCCHHHHHHHHhccCCCCCc
Q 018834          265 KCF-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       265 ~~f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      .++ +.+..|.+.+|++|++|+|.+
T Consensus       253 ~~~~s~d~~eg~~Af~ekr~p~f~g  277 (278)
T 4f47_A          253 EVFLSDDAKEGPQAFAQKRKPNFQN  277 (278)
T ss_dssp             GGGGSSHHHHHHHHHHTTSCCCCCC
T ss_pred             HHhcCHHHHHHHHHHhcCCCCCCCC
Confidence            777 566777788899999988753

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}

Probab=100.00  E-value=6.7e-51  Score=376.40  Aligned_cols=250  Identities=18%  Similarity=0.165  Sum_probs=215.6

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEc-CCCccccCCChhhHHHhhhcCChH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG-SGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      .++.+.++.+++|++|||||| ++|+||.+|+.+|.++|+.++.|+++++|||+| .|++||+|+|++++..    .. .
T Consensus         7 ~~~~i~~~~~~~v~~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~----~~-~   80 (265)
T 2ppy_A            7 KKQYLTVFKEDGIAEIHLHIN-KSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRS----AD-P   80 (265)
T ss_dssp             ECSSEEEEEETTEEEEEECSS-TTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTT----SC-H
T ss_pred             CCCeEEEEeeCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhc----cc-h
Confidence            355799999999999999999 899999999999999999999999999999999 8899999999998753    11 2


Q ss_pred             HHHHHHHHH-HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCe-eEecccccccccCCCchHHHHhhccHH
Q 018834          111 ECKDFFRTL-YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT-VFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       111 ~~~~~~~~~-~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a-~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      ....+.... ++++..|.++||||||+|||+|+|||++|+++||+|||++++ +|++||+++|++|++|++++|+|++|.
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~  160 (265)
T 2ppy_A           81 RFKTQFCLFCNETLDKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGY  160 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCH
T ss_pred             hHHHHHHHHHHHHHHHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCH
Confidence            223334445 678889999999999999999999999999999999999999 999999999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHH
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDK  265 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~  265 (350)
                      . +++|++||++++|+||+++||||+++|++++.+.+..+ .+++..+|.++..+|+.++.......... ..+...+..
T Consensus       161 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~  240 (265)
T 2ppy_A          161 SRALDMNITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAVSNIKLAIMNGKEMPLNVAIRYEGELQNL  240 (265)
T ss_dssp             HHHHHHHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence            7 99999999999999999999999999999887655544 67889999999999999887654433332 234566677


Q ss_pred             hc-CcCCHHHHHHHHhccCCCCC
Q 018834          266 CF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      ++ +.+..+.+.++++|++|.|.
T Consensus       241 ~~~s~d~~egi~af~ekr~p~~~  263 (265)
T 2ppy_A          241 LFRSEDAKEGLSAFLEKRQPNWK  263 (265)
T ss_dssp             HHTSHHHHHHHHHHHTTSCCCCC
T ss_pred             HhCCHHHHHHHHHHHcCCCCCCC
Confidence            77 46677778888999988764

>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1e-51  Score=380.78  Aligned_cols=252  Identities=20%  Similarity=0.272  Sum_probs=207.4

Q ss_pred             CCCCCcccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHH
Q 018834           23 RTSSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYH  102 (350)
Q Consensus        23 ~~~~~~~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~  102 (350)
                      .++..+...++..|.++++++|++||||||+++|+||.+|+.+|.+++++++.| ++++|||||.|++||+|+|++... 
T Consensus        10 ~~~~~~~~~~~~~i~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~-   87 (264)
T 3he2_A           10 GTLEAQTQGPGSMIGITQAEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA-   87 (264)
T ss_dssp             ------------CEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT-
T ss_pred             cccccccCCCCCeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch-
Confidence            455667777888999999999999999999999999999999999999999988 999999999999999999998311 


Q ss_pred             hhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHH
Q 018834          103 FMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYL  182 (350)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L  182 (350)
                           .   ...+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|
T Consensus        88 -----~---~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L  159 (264)
T 3he2_A           88 -----F---AADYPDRLIELHKAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRL  159 (264)
T ss_dssp             -----T---GGGHHHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHH
T ss_pred             -----h---hHHHHHHHHHHHHHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHH
Confidence                 1   12234556778888999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHH
Q 018834          183 SHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID  261 (350)
Q Consensus       183 ~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  261 (350)
                      +|++|.. +++|++||++++|+||+++||||++++   ++++.+.+.+++..+|.++..+|+.++.... .......+.+
T Consensus       160 ~r~vG~~~A~~llltG~~i~A~eA~~~GLV~~v~~---~~~a~~~A~~la~~~p~a~~~~K~~l~~~~~-~~~~~~~e~~  235 (264)
T 3he2_A          160 SSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGT---LADAQAWAAEIARLAPLAIQHAKRVLNDDGA-IEEAWPAHKE  235 (264)
T ss_dssp             HHHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEECC---HHHHHHHHHHHHTSCHHHHHHHHHHHHTSSC-SCCCCHHHHH
T ss_pred             HHHhCHHHHHHHHHcCCCccHHHHHHCCCeEEEec---HHHHHHHHHHHHcCCHHHHHHHHHHHHccCC-HHHHHHHHHH
Confidence            9999988 999999999999999999999999986   5556666678889999999999999987632 2223334556


Q ss_pred             HHHHhc-CcCCHHHHHHHHhccCCCCCc
Q 018834          262 IVDKCF-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       262 ~i~~~f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      .+..+| +.|..|++.+|+||++|.|.+
T Consensus       236 ~~~~~~~s~d~~Eg~~AF~ekR~P~f~g  263 (264)
T 3he2_A          236 LFDKAWGSQDVIEAQVARMEKRPPKFQG  263 (264)
T ss_dssp             HHHHHHTSHHHHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHhCCHHHHHHHHHHhcCCCCCCCC
Confidence            677788 567778888999999998753

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3

Probab=100.00  E-value=2.6e-51  Score=383.39  Aligned_cols=260  Identities=20%  Similarity=0.281  Sum_probs=209.0

Q ss_pred             cccCCCCcEEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhc
Q 018834           28 VTDDLCNQVLVEGKANSRMAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ  106 (350)
Q Consensus        28 ~~~~~~~~v~~~~~~~v~~ItLn-rp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~  106 (350)
                      .....++.|.++.+++|++|||| ||+++|+||.+|+.+|.++|+.++.|+. ++|||||.|++||+|+|++++......
T Consensus        17 ~~~~~~~~v~~~~~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~   95 (291)
T 2fbm_A           17 RGSSTYRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRN   95 (291)
T ss_dssp             ----CCSSEEEEECSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHH
T ss_pred             CCCCCcceEEEEEeCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccc
Confidence            34456678999999999999999 7999999999999999999999999875 999999999999999999998643211


Q ss_pred             CChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhcc
Q 018834          107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP  186 (350)
Q Consensus       107 ~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~  186 (350)
                      +.......+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~v  175 (291)
T 2fbm_A           96 NRNTASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMM  175 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHH
Confidence            11122334455566788889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHH
Q 018834          187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIV  263 (350)
Q Consensus       187 g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i  263 (350)
                      |.. +++|++||++++|+||+++||||+|+|++++.+.+ +.+.+++..+|.++..+|+.++......... ...+...+
T Consensus       176 G~~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~  255 (291)
T 2fbm_A          176 GKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKALVRCNIKLELEQANERECEVL  255 (291)
T ss_dssp             CHHHHHHHHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTSCHHHHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHcCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhccCHHHHHHHHHHHH
Confidence            987 99999999999999999999999999999887654 4457889999999999999988643222122 22245556


Q ss_pred             HHhc-CcCCHHHHHHH-HhccCCCCCc
Q 018834          264 DKCF-GLDTVEEIIDS-LESEASLIND  288 (350)
Q Consensus       264 ~~~f-~~~~~~ei~~~-lek~~~~~~~  288 (350)
                      ..+| +.+..|++.+| ++|++|.|.+
T Consensus       256 ~~~~~s~d~~eg~~Af~~ekR~P~f~~  282 (291)
T 2fbm_A          256 RKIWSSAQGIESMLKIPLLGYKAAFPP  282 (291)
T ss_dssp             HHHHTSHHHHHHHHTC-----------
T ss_pred             HHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence            6777 56777778888 9999887643

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}

Probab=100.00  E-value=1e-51  Score=380.03  Aligned_cols=248  Identities=20%  Similarity=0.267  Sum_probs=189.0

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      .+..|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.........  
T Consensus         4 ~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~--   81 (256)
T 3qmj_A            4 SMVTLQIDDDNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNF--   81 (256)
T ss_dssp             --CCEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSC--
T ss_pred             CcceEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhH--
Confidence            356799999999999999999999999999999999999999999999999999999999999999998754322210  


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                       ..+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        82 -~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A  160 (256)
T 3qmj_A           82 -SEGKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNA  160 (256)
T ss_dssp             -CCCSSHHHHHHHHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHH
Confidence             11223346678889999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-  267 (350)
                      ++|++||++++|+||+++||||+++|++++.+.+..+ .+++..+|.++..+|+.++......... ...+...+..+| 
T Consensus       161 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~  240 (256)
T 3qmj_A          161 AWLLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSLMAVKHTMVEPNRAQIAAASARENAHFAELMG  240 (256)
T ss_dssp             HHHHHSCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHCC---------------------
T ss_pred             HHHHHcCCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999987655544 7888999999999999998765433222 223455666777 


Q ss_pred             CcCCHHHHHHHHhcc
Q 018834          268 GLDTVEEIIDSLESE  282 (350)
Q Consensus       268 ~~~~~~ei~~~lek~  282 (350)
                      +.+..|.+.+|++|+
T Consensus       241 s~d~~eg~~af~ekr  255 (256)
T 3qmj_A          241 AQANAAALADFTDRR  255 (256)
T ss_dssp             ---------------
T ss_pred             CHHHHHHHHHHHccC
Confidence            456677777888876

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*

Probab=100.00  E-value=3.2e-51  Score=380.61  Aligned_cols=251  Identities=21%  Similarity=0.307  Sum_probs=197.6

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      .++.+.++++++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||+|.|++||+|+|++++...........
T Consensus         7 ~~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~   86 (276)
T 2j5i_A            7 RWKTVKVEIEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEIL   86 (276)
T ss_dssp             CCSSEEEEEETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTH
T ss_pred             CCceEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHH
Confidence            35678999999999999999999999999999999999999999999999999999999999999998754321111111


Q ss_pred             HHHHHHHHHHH-HHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          112 CKDFFRTLYSF-IYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       112 ~~~~~~~~~~l-~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ...+....+.+ +..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. 
T Consensus        87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~  166 (276)
T 2j5i_A           87 QEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQ  166 (276)
T ss_dssp             HHHHHHHHHHHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHH
Confidence            22333333443 6678999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHH-HHHHHHHh-
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-RIDIVDKC-  266 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~i~~~-  266 (350)
                      +++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..+|.++..+|+.++............ +......+ 
T Consensus       167 A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~  246 (276)
T 2j5i_A          167 SLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLRAAKHGFKRCRELTWEQNEDYLYAKLDQSR  246 (276)
T ss_dssp             HHHHHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999998887655444 6888999999999999998765433332222 23333333 


Q ss_pred             -c-Cc-CCHHHHHHHHhcc
Q 018834          267 -F-GL-DTVEEIIDSLESE  282 (350)
Q Consensus       267 -f-~~-~~~~ei~~~lek~  282 (350)
                       + +. +..|++.+|++|+
T Consensus       247 ~~~s~~d~~eg~~AF~ekr  265 (276)
T 2j5i_A          247 LLDTEGGREQGMKQFLDDK  265 (276)
T ss_dssp             HHC----------------
T ss_pred             hcCChHHHHHHHHHHHhcc
Confidence             5 45 6788888889887

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}

Probab=100.00  E-value=4.4e-51  Score=377.59  Aligned_cols=249  Identities=22%  Similarity=0.267  Sum_probs=209.7

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||||.|++||+|+|++ ...   .   ...
T Consensus         8 ~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~---~---~~~   80 (265)
T 3rsi_A            8 ARELLVERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGW---M---VRD   80 (265)
T ss_dssp             -CCEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-----------------
T ss_pred             CCcEEEEEECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-ccc---c---cch
Confidence            467999999999999999999999999999999999999999999999999999999999999998 211   1   111


Q ss_pred             HHHHHHHHH-HHHHH-h--cCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834          113 KDFFRTLYS-FIYLL-G--THLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       113 ~~~~~~~~~-l~~~i-~--~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      ..+....+. ++..+ .  ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.
T Consensus        81 ~~~~~~~~~~~~~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~  160 (265)
T 3rsi_A           81 GSAPPLDPATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPY  160 (265)
T ss_dssp             ----CCCHHHHHHHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHSCH
T ss_pred             HHHHHHhHHHHHHHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHhCH
Confidence            223333345 77788 8  9999999999999999999999999999999999999999999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHH
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDK  265 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~  265 (350)
                      . +++|++||++++|+||+++||||+++|++++.+.+..+ .+++..+|.++..+|+.++........... .+...+..
T Consensus       161 ~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~  240 (265)
T 3rsi_A          161 TKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAVRNAKEAIVRSGWLAEEDARAIEARLTRP  240 (265)
T ss_dssp             HHHHHHHHHCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCHHHHHHCCCccEecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence            8 99999999999999999999999999999988655554 688899999999999999876554433333 34566777


Q ss_pred             hc-CcCCHHHHHHHHhccCCCCCc
Q 018834          266 CF-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      ++ +.+..|.+.+|++|++|.|.+
T Consensus       241 ~~~s~d~~eg~~af~ekr~p~f~g  264 (265)
T 3rsi_A          241 VITSADAREGLAAFKEKREARFTG  264 (265)
T ss_dssp             HHTSHHHHHHHHHHHHTSCCCCCC
T ss_pred             HhcCHHHHHHHHHHHcCCCCCCCC
Confidence            77 567777888999999988753

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A

Probab=100.00  E-value=3.8e-51  Score=380.06  Aligned_cols=255  Identities=17%  Similarity=0.222  Sum_probs=214.7

Q ss_pred             CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcC---C
Q 018834           33 CNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG---K  108 (350)
Q Consensus        33 ~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~---~  108 (350)
                      ++.|.+++ +++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||||.|++||+|+|++++.......   .
T Consensus         2 ~~~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~   81 (275)
T 1dci_A            2 YESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDD   81 (275)
T ss_dssp             CSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSS
T ss_pred             CceEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccch
Confidence            45688887 5789999999999999999999999999999999999999999999999999999999986532111   1


Q ss_pred             h----HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhh
Q 018834          109 L----EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH  184 (350)
Q Consensus       109 ~----~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~r  184 (350)
                      .    .....+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r  161 (275)
T 1dci_A           82 VARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPK  161 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGG
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHH
Confidence            1    122334455667888899999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccHH-H-HHHHhhcCCCCCHHHHHHCCCCccccCC-CChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHH
Q 018834          185 LPGH-L-GEFLALTGAKLNGAEMMACGLATHYSVS-EKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHR  259 (350)
Q Consensus       185 l~g~-~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~-~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~  259 (350)
                      ++|. . +++|++||++++|+||+++||||+|+|+ +++.+. .+.+.+++..+|.++..+|+.++......... ...+
T Consensus       162 ~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e  241 (275)
T 1dci_A          162 VIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYM  241 (275)
T ss_dssp             TCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred             HhCcHHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCHHHHHHHH
Confidence            9998 6 9999999999999999999999999998 777654 44457888899999999999987654333222 2234


Q ss_pred             HHHHHHhc-CcCCHHHHHHHHhc---cCCCCC
Q 018834          260 IDIVDKCF-GLDTVEEIIDSLES---EASLIN  287 (350)
Q Consensus       260 ~~~i~~~f-~~~~~~ei~~~lek---~~~~~~  287 (350)
                      ...+..+| +.+..|++.+|++|   ++|.|.
T Consensus       242 ~~~~~~~~~s~d~~eg~~af~ek~~~r~p~f~  273 (275)
T 1dci_A          242 ATWNMSMLQTQDIIKSVQAAMEKKDSKSITFS  273 (275)
T ss_dssp             HHHHHHHTSSHHHHHHHHHHHTTCCGGGCCCC
T ss_pred             HHHHHHHhcCHHHHHHHHHHHhcCCCCCCCCC
Confidence            55666777 56777778888999   888764

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}

Probab=100.00  E-value=3e-51  Score=382.41  Aligned_cols=253  Identities=17%  Similarity=0.190  Sum_probs=217.4

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      +.+..+.++++++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||||.|+.||+|+|++++...   ...+
T Consensus        30 ~~~~~v~~~~~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~---~~~~  106 (287)
T 2vx2_A           30 SEPRPTSARQLDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEE---QGRD  106 (287)
T ss_dssp             --CCSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGG---GCHH
T ss_pred             CCCcceEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcc---cchh
Confidence            3456899999999999999999999999999999999999999999999999999999999999999987532   1223


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....++...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ |+|++|.. 
T Consensus       107 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~  185 (287)
T 2vx2_A          107 YHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKV  185 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHH
Confidence            3445666778888999999999999999999999999999999999999999999999999999999999 99999987 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f  267 (350)
                      +++|++||++++|+||+++||||+|||++++.+.+..+ .+++..+|.++..+|+.++.......... ..+...+..+|
T Consensus       186 A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~  265 (287)
T 2vx2_A          186 ALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNL  265 (287)
T ss_dssp             HHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999998887655544 68889999999999999887554333322 23455666777


Q ss_pred             -CcCCHHHHHHHHhccCCCCC
Q 018834          268 -GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       268 -~~~~~~ei~~~lek~~~~~~  287 (350)
                       +.+..+.+.+|++|++|.|.
T Consensus       266 ~s~d~~egi~af~ekr~p~f~  286 (287)
T 2vx2_A          266 ALRDGQEGITAFLQKRKPVWS  286 (287)
T ss_dssp             TSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCHHHHHHHHHHHcCCCCCCC
Confidence             56777778888999988764

>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A

Probab=100.00  E-value=2e-51  Score=383.83  Aligned_cols=256  Identities=15%  Similarity=0.214  Sum_probs=211.3

Q ss_pred             ccCCCCcEEEEEe-CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhc
Q 018834           29 TDDLCNQVLVEGK-ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQ  106 (350)
Q Consensus        29 ~~~~~~~v~~~~~-~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~  106 (350)
                      ..+.++.|+++++ ++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||||.| ++||+|+|++++....  
T Consensus        22 ~~~~~~~v~~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~--   99 (289)
T 3t89_A           22 CSEGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYG--   99 (289)
T ss_dssp             CCTTCSSEEEEEETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC--------
T ss_pred             cCCCCCeEEEEEecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccc--
Confidence            4445678999999 99999999999999999999999999999999999999999999999 6999999999875321  


Q ss_pred             CChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhcc
Q 018834          107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP  186 (350)
Q Consensus       107 ~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~  186 (350)
                      ...+....+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++
T Consensus       100 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~v  179 (289)
T 3t89_A          100 GYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIV  179 (289)
T ss_dssp             ----------CTHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHH
T ss_pred             cchhhhHHHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhc
Confidence            10111111222345678889999999999999999999999999999999999999999999999888888899999999


Q ss_pred             HHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHH
Q 018834          187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIV  263 (350)
Q Consensus       187 g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i  263 (350)
                      |.. +++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..++.++..+|+.++..... ..... .+.+.+
T Consensus       180 G~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~~a~~~~K~~l~~~~~~-~~~~~~~e~~~~  258 (289)
T 3t89_A          180 GQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDG-QAGLQELAGNAT  258 (289)
T ss_dssp             CHHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTSH-HHHHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCcccHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccc-chHHHHHHHHHH
Confidence            998 99999999999999999999999999999987655544 788999999999999998875321 11111 234455


Q ss_pred             HHhc-CcCCHHHHHHHHhccCCCCC
Q 018834          264 DKCF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       264 ~~~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      ..+| +.|..|++.+|++|++|+|.
T Consensus       259 ~~~~~s~d~~Eg~~AF~ekR~P~f~  283 (289)
T 3t89_A          259 MLFYMTEEGQEGRNAFNQKRQPDFS  283 (289)
T ss_dssp             HHHTTSSTTTHHHHHHHTTSCCCCT
T ss_pred             HHHhcCHHHHHHHHHHhcCCCCCCC
Confidence            6677 57888889999999999875

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.4e-51  Score=379.26  Aligned_cols=250  Identities=20%  Similarity=0.258  Sum_probs=214.4

Q ss_pred             ccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCC
Q 018834           29 TDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK  108 (350)
Q Consensus        29 ~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~  108 (350)
                      ++++.+.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++....  .+
T Consensus        23 ~~~~~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~  100 (276)
T 3rrv_A           23 VYDMPTEIDVRADGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELS--AD  100 (276)
T ss_dssp             -CCCCTTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHH--HC
T ss_pred             cCCCCCeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcc--cc
Confidence            3445678999999999999999999999999999999999999999999999999999999999999999987532  12


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834          109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       109 ~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      ......++...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.
T Consensus       101 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~  180 (276)
T 3rrv_A          101 ADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISL  180 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCH
Confidence            33445667777889999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHH
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDK  265 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~  265 (350)
                      . +++|++||++++|+||+++||||+++  +++.+. .+.+.+++..++.++..+|+.++......... ...+...+..
T Consensus       181 ~~A~ellltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~  258 (276)
T 3rrv_A          181 LLAKEYALTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELPQQAVESTKRVLNIHLERAVLASLDYALSAESQ  258 (276)
T ss_dssp             HHHHHHHHHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHH
Confidence            8 99999999999999999999999999  666654 44457888999999999999988643322222 2234556677


Q ss_pred             hcC-cCCHHHHHHHHhcc
Q 018834          266 CFG-LDTVEEIIDSLESE  282 (350)
Q Consensus       266 ~f~-~~~~~ei~~~lek~  282 (350)
                      +|. .+..|++.+|++|+
T Consensus       259 ~~~s~d~~eg~~AF~ekR  276 (276)
T 3rrv_A          259 SFVTEDFRSIVTKLADKN  276 (276)
T ss_dssp             HTTSHHHHHHHHHHHCCC
T ss_pred             HhCCHHHHHHHHHHHcCC
Confidence            884 56667777778774

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A

Probab=100.00  E-value=7.6e-51  Score=374.64  Aligned_cols=249  Identities=22%  Similarity=0.286  Sum_probs=212.5

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      +..|.++.+++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||||.|++||+|+|++++...    ... .
T Consensus         4 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~~-~   78 (258)
T 2pbp_A            4 FVSIAARQEGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKD----DPI-R   78 (258)
T ss_dssp             CCSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTC----CHH-H
T ss_pred             cceEEEEeeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcc----cch-h
Confidence            34688999999999999999999999999999999999999999999999999999999999999987532    111 1


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+.... +++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        79 ~~~~~~~-~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~  157 (258)
T 2pbp_A           79 LEWLNQF-ADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRAL  157 (258)
T ss_dssp             HHHHCTT-HHHHHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHHH
T ss_pred             HHHHHHH-HHHHHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHHHH
Confidence            2222222 567788999999999999999999999999999999999999999999999999999999999999987 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~  268 (350)
                      +|++||+.++|+||+++||||+++|++++.+... .+.+++..+|.++..+|+.++......... ...+.+.+..++ +
T Consensus       158 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s  237 (258)
T 2pbp_A          158 EWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLALRLIKEAVQKAVDYPLYEGMQFERKNFYLLFAS  237 (258)
T ss_dssp             HHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHcCCccCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999988876544 446888899999999999887654333222 233456677777 4


Q ss_pred             cCCHHHHHHHHhccCCCCC
Q 018834          269 LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~~  287 (350)
                      .+..+.+.++++|++|.|.
T Consensus       238 ~d~~eg~~af~ekr~p~~~  256 (258)
T 2pbp_A          238 EDQKEGMAAFLEKRKPRFQ  256 (258)
T ss_dssp             HHHHHHHHHHHTTSCCCCC
T ss_pred             HHHHHHHHHHHccCCCCCC
Confidence            5677778888999988764

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A

Probab=100.00  E-value=4.8e-52  Score=383.09  Aligned_cols=248  Identities=20%  Similarity=0.193  Sum_probs=196.7

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|++||+|+|++++.......... 
T Consensus         9 ~m~~v~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~-   87 (262)
T 3r9q_A            9 MQPAVRVEKAGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNELHP-   87 (262)
T ss_dssp             -CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCCCCT-
T ss_pred             cCCEEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhhHHH-
Confidence            4557999999999999999999999999999999999999999999999999999999999999999886432111000 


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                           .....+...+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        88 -----~~~~~~~~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A  162 (262)
T 3r9q_A           88 -----HGPGPMGPSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRA  162 (262)
T ss_dssp             -----TSSCTTSSTTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHH
T ss_pred             -----hhhhHHHHHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHH
Confidence                 0011233456799999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHH-HHHHHHHhcC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-RIDIVDKCFG  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~i~~~f~  268 (350)
                      ++|++||++++|+||+++||||+++|++++.+.+..+ .+++..+|.+++.+|+.++............ +.. ...++.
T Consensus       163 ~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~  241 (262)
T 3r9q_A          163 MDLILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVRADRDSAIAQWGMAEEAALDNEFG-SIERVA  241 (262)
T ss_dssp             HHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTTSCHHHHHHHHHT-HHHHHH
T ss_pred             HHHHHcCCcCCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHH-HHHHhc
Confidence            9999999999999999999999999999987655554 6888999999999999998765544333332 344 666774


Q ss_pred             cCCHHHHHHHHhccCCCC
Q 018834          269 LDTVEEIIDSLESEASLI  286 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~  286 (350)
                      .|..|++.+|++|++|++
T Consensus       242 sd~~Eg~~AF~ekr~p~~  259 (262)
T 3r9q_A          242 TEALEGAGRFAAGEGRHG  259 (262)
T ss_dssp             C-----------------
T ss_pred             cHHHHHHHHHHcCCCCCC
Confidence            488888999999987654

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}

Probab=100.00  E-value=1.7e-50  Score=375.26  Aligned_cols=240  Identities=19%  Similarity=0.254  Sum_probs=210.3

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +++.|.++++++|++||||||++ |+||.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++...    ....
T Consensus        22 m~~~v~~~~~~~Va~ItlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~----~~~~   96 (277)
T 4di1_A           22 MNEFVSVVADQGLATLVVSRPPT-NAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTL----NAPE   96 (277)
T ss_dssp             -CCSEEEEEETTEEEEEECCTTT-TCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTC----CHHH
T ss_pred             CCceEEEEEECCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCccccccc----ChHH
Confidence            55679999999999999999999 999999999999999999999999999999999999999999998642    3344


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...+....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        97 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A  176 (277)
T 4di1_A           97 ADTAARVRLEAIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRA  176 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHH
Confidence            556667778899999999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhcC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCFG  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f~  268 (350)
                      ++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..++.++..+|+.++.......... ..+...+..+|.
T Consensus       177 ~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~  256 (277)
T 4di1_A          177 KELVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRALAAAKAVINDVFELEATERAAAERRRYVELFA  256 (277)
T ss_dssp             HHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSCHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999987655544 68889999999999999987665443333 334667778886


Q ss_pred             cCCHHHHHHHHhccCCC
Q 018834          269 LDTVEEIIDSLESEASL  285 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~  285 (350)
                      .+         ||++|+
T Consensus       257 s~---------ekR~P~  264 (277)
T 4di1_A          257 AG---------QRGPDG  264 (277)
T ss_dssp             GG---------GC----
T ss_pred             Cc---------ccCCCc
Confidence            66         888776

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0

Probab=100.00  E-value=5.8e-52  Score=385.34  Aligned_cols=256  Identities=19%  Similarity=0.222  Sum_probs=211.8

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhh--cC-C
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN--QG-K  108 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~--~~-~  108 (350)
                      +++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||||.|++||+|+|++++.....  .+ .
T Consensus         9 m~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~   88 (274)
T 3tlf_A            9 SFDTIKYEVDGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERP   88 (274)
T ss_dssp             CCSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------C
T ss_pred             cCCceEEEEECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccc
Confidence            55689999999999999999999999999999999999999999999999999999999999999999865321  00 0


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834          109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       109 ~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      .......+...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|+|++|.
T Consensus        89 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~  167 (274)
T 3tlf_A           89 YLSTYDQWEAPQEGTPPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPR  167 (274)
T ss_dssp             TTCSGGGGSCCCTTCCCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCH
T ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCH
Confidence            000111222334567778999999999999999999999999999999999999999999999999 9999999999998


Q ss_pred             H-HHHHhhcCC--CCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHH
Q 018834          189 L-GEFLALTGA--KLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIV  263 (350)
Q Consensus       189 ~-a~~l~ltG~--~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i  263 (350)
                      . +++|++||+  +++|+||+++||||+++|++++.+.+..+ .+++..++.++..+|+.++........... .+...+
T Consensus       168 ~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~  247 (274)
T 3tlf_A          168 SIALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAVRGTRLAILKGLNVPLHEAEILAETFR  247 (274)
T ss_dssp             HHHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence            8 999999999  99999999999999999999988655554 688899999999999999876554433333 346677


Q ss_pred             HHhc-CcCCHHHHHHHHhccCCCCCc
Q 018834          264 DKCF-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       264 ~~~f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      ..++ +.+..|.+.+|++|++|+|.+
T Consensus       248 ~~~~~s~d~~eg~~af~ekr~p~f~g  273 (274)
T 3tlf_A          248 ERVLRTEDAAEGPRAFVEKRQPNWQC  273 (274)
T ss_dssp             HHHHTSHHHHHHHHHHHTTSCCCCCC
T ss_pred             HHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence            7788 467777788899999888753

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=9.7e-52  Score=381.97  Aligned_cols=252  Identities=17%  Similarity=0.153  Sum_probs=213.7

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||||.|+.||+|+|++++......+..   
T Consensus         8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~---   84 (265)
T 3swx_A            8 YETLRIRRDGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGAS---   84 (265)
T ss_dssp             CSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--CC---
T ss_pred             CceEEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchhH---
Confidence            46799999999999999999999999999999999999999999999999999999899999999998754221111   


Q ss_pred             HHHHHHHHHHHHHH-hcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          113 KDFFRTLYSFIYLL-GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       113 ~~~~~~~~~l~~~i-~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                       .+....++++..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        85 -~~~~~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A  163 (265)
T 3swx_A           85 -LTPEGGINPWQVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNA  163 (265)
T ss_dssp             -CCCTTCCCTTCCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHHHH
T ss_pred             -HHHHHHHHHHHHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHHHH
Confidence             1111222345567 899999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-  267 (350)
                      ++|++||++++|+||+++||||+++|++++.+.+. .+.+++..+|.++..+|+.++......... ...+...+..++ 
T Consensus       164 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~  243 (265)
T 3swx_A          164 MRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGVQATLRNARLAVREGDAAAEEQLVPTVRELFT  243 (265)
T ss_dssp             HHHHTTCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999876544 447888899999999999988654333222 223456677777 


Q ss_pred             CcCCHHHHHHHHhccCCCCCc
Q 018834          268 GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~~~  288 (350)
                      +.+..|++.+|++|++|+|.+
T Consensus       244 s~d~~eg~~af~ekr~p~f~g  264 (265)
T 3swx_A          244 SEDATLGVQAFLSRTTAEFVG  264 (265)
T ss_dssp             SHHHHHHHHHHHTTCCCCCCC
T ss_pred             CHHHHHHHHHHhcCCCCCCCC
Confidence            457778888899999988753

>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3

Probab=100.00  E-value=6.3e-51  Score=376.34  Aligned_cols=251  Identities=17%  Similarity=0.173  Sum_probs=214.3

Q ss_pred             CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.+.+++ +++|++||||||+ +|+||.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++ +..... +..+.
T Consensus         9 ~~~v~~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~-~~~~~   85 (264)
T 1wz8_A            9 YPGLAFAWPRPGVLEITFRGEK-LNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMR-ASHEA   85 (264)
T ss_dssp             CTTEEEEEEETTEEEEEECCSG-GGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHH-HCHHH
T ss_pred             CCeEEEEEccCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccc-cchHH
Confidence            34688999 9999999999999 99999999999999999999999999999999999999999999 754211 01122


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...++...++++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        86 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a  165 (264)
T 1wz8_A           86 LLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKA  165 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHH
Confidence            234556677888999999999999999999999999999999999999999999999999999999999999999987 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-C
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-G  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-~  268 (350)
                      ++|++||++++|+||+++||||+++|++++.+....+ .+++..++.++..+|+.++............+...+..+| +
T Consensus       166 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~l~~e~~~~~~~~~s  245 (264)
T 1wz8_A          166 KYHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALHHTKHALNHWYRSFLPHFELSLALEFLGFSG  245 (264)
T ss_dssp             HHHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHGGGS
T ss_pred             HHHHHcCCCCCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999887655554 6788899999999999887643332222233455667777 5


Q ss_pred             cCCHHHHHHHHhccCCCC
Q 018834          269 LDTVEEIIDSLESEASLI  286 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~  286 (350)
                      .+..+.+.++++|++|.|
T Consensus       246 ~d~~eg~~af~ekr~p~f  263 (264)
T 1wz8_A          246 KELEEGLKALKEKRPPEF  263 (264)
T ss_dssp             HHHHHHHHHHHTTSCCCC
T ss_pred             hHHHHHHHHHHccCCCCC
Confidence            677777888899988765

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0

Probab=100.00  E-value=4.4e-52  Score=384.17  Aligned_cols=252  Identities=19%  Similarity=0.269  Sum_probs=215.4

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++........   
T Consensus         5 m~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~---   81 (265)
T 3qxz_A            5 MVTELHEEIRDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPR---   81 (265)
T ss_dssp             -CCEEEEEEETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCC---
T ss_pred             ccceEEEEEECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhH---
Confidence            45679999999999999999999999999999999999999999999999999999999999999998764311111   


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                       ..++.. +.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        82 -~~~~~~-~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A  159 (265)
T 3qxz_A           82 -NPDFSA-SPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVA  159 (265)
T ss_dssp             -SSCCCS-CCSSSCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHH
T ss_pred             -HHHHHH-HHHHHHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHH
Confidence             112222 4567778999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccC-CHHHHHHHHHHHhccCCCCc-ch--HHHHHHHHHH
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTD-DPSVIEACLEKYSDLVYPDK-NS--VIHRIDIVDK  265 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~-~~~~i~~~~~~~~~~~~~~~-~~--~~~~~~~i~~  265 (350)
                      ++|++||++++|+||+++||||+++|++++.+.+..+ .+++.. +|.++..+|+.++....... ..  ...+...+..
T Consensus       160 ~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~a~~~~K~~l~~~~~~~l~~~~~l~~e~~~~~~  239 (265)
T 3qxz_A          160 AELLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESAALTKRLLWDAQMTGMSAAEVAARETADHLR  239 (265)
T ss_dssp             HHHHHHCCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998887655444 678888 99999999999886543222 22  3345667778


Q ss_pred             hc-CcCCHHHHHHHHhccCCCCCc
Q 018834          266 CF-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      +| +.+..|++.+|++|++|+|.+
T Consensus       240 ~~~s~d~~egi~Af~ekr~P~f~g  263 (265)
T 3qxz_A          240 LMGSQDAAEGPRAFIDGRPPRWAG  263 (265)
T ss_dssp             HHTSTHHHHHHHHHHHTSCCCCCC
T ss_pred             HhCChHHHHHHHHHHcCCCCCCCC
Confidence            88 466777788899999998754

>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}

Probab=100.00  E-value=4.6e-52  Score=387.78  Aligned_cols=249  Identities=16%  Similarity=0.187  Sum_probs=211.6

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCC-h
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK-L  109 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~-~  109 (350)
                      .++.|.++++++|++||||||+ +|+||.+|+.+|.++|+.++.|++|++|||||.| ++||+|+|++++........ .
T Consensus         7 ~~~~i~~~~~~~va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~   85 (287)
T 3gkb_A            7 AYSTLRVSSEHGVARIILDNPP-VNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELA   85 (287)
T ss_dssp             CCSSEEEEEETTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHH
T ss_pred             CCCeEEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhh
Confidence            4567999999999999999998 7999999999999999999999999999999998 89999999998753210000 0


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeC-CeeEecccccccccCCCchHHHHhhccHH
Q 018834          110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG-KTVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate-~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      .....++...+.++..|.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|++|++++|+|++|.
T Consensus        86 ~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~  165 (287)
T 3gkb_A           86 ASAPADVNVFQAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGR  165 (287)
T ss_dssp             HTSCTTCCTTHHHHHHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCH
Confidence            00011233456788889999999999999999999999999999999999 99999999999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHh
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC  266 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (350)
                      . +++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..+|.++..+|+.++...  .......+...+..+
T Consensus       166 ~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~~~--~~~~l~~e~~~~~~~  243 (287)
T 3gkb_A          166 NRALEVVLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIEAAKRSLPADD--LKEGLLGENDAWAAT  243 (287)
T ss_dssp             HHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCTTHHHHHHHHSCCCC--CHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHccC--HHHHHHHHHHHHHHH
Confidence            8 99999999999999999999999999998887655554 6888999999999999988742  223333456677778


Q ss_pred             c-CcCCHHHHHHHHhccC
Q 018834          267 F-GLDTVEEIIDSLESEA  283 (350)
Q Consensus       267 f-~~~~~~ei~~~lek~~  283 (350)
                      | +.+..|++.+|++|++
T Consensus       244 ~~s~d~~eg~~AF~ekr~  261 (287)
T 3gkb_A          244 FSLPAAQQLISGGLKDGA  261 (287)
T ss_dssp             HTSHHHHHHHHHHHHTTT
T ss_pred             hCCHHHHHHHHHHHhcCC
Confidence            8 5677777888899975

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0

Probab=100.00  E-value=1.2e-50  Score=375.10  Aligned_cols=252  Identities=20%  Similarity=0.215  Sum_probs=208.1

Q ss_pred             CCcEEEE----EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCC
Q 018834           33 CNQVLVE----GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK  108 (350)
Q Consensus        33 ~~~v~~~----~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~  108 (350)
                      .+.+.++    .+++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||||.|++||+|+|++++........
T Consensus         6 ~~~v~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~   85 (267)
T 3oc7_A            6 DALVDYAGPAATGGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGSPSS   85 (267)
T ss_dssp             CSSEEEECHHHHSSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC-----------C
T ss_pred             ccccCCCCccceeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccCchh
Confidence            3568888    899999999999999999999999999999999999999999999999999999999998862111111


Q ss_pred             -hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH
Q 018834          109 -LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG  187 (350)
Q Consensus       109 -~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g  187 (350)
                       ......+....++++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+ ++|
T Consensus        86 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~-~vG  164 (267)
T 3oc7_A           86 AYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP-KLS  164 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT-TSC
T ss_pred             hhhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH-HhC
Confidence             111234667778899999999999999999999999999999999999999999999999999999999999999 778


Q ss_pred             HH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHH
Q 018834          188 HL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVD  264 (350)
Q Consensus       188 ~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~  264 (350)
                      .. +++|++||++++|+||+++||||++  ++++.+. .+.+.+++..+|.++..+|+.++......... ...+...+.
T Consensus       165 ~~~A~~l~ltg~~~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~  242 (267)
T 3oc7_A          165 ARAAARYYLTGEKFDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRGSPQGLAASKALTTAAVLERFDRDAERLAEESA  242 (267)
T ss_dssp             HHHHHHHHHHCCCBCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCccCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Confidence            77 9999999999999999999999999  6677654 44457888999999999999888653222222 223455667


Q ss_pred             Hhc-CcCCHHHHHHHHhccCCCCC
Q 018834          265 KCF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       265 ~~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      .++ +.+..|.+.+|++|++|.|.
T Consensus       243 ~~~~s~d~~eg~~af~ekr~p~f~  266 (267)
T 3oc7_A          243 RLFVSDEAREGMLAFLEKRSPNWT  266 (267)
T ss_dssp             HHHTSHHHHHHHHHHHHTCCCTTC
T ss_pred             HHhcCHHHHHHHHHHHcCCCCCCC
Confidence            777 56777778889999988764

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3

Probab=100.00  E-value=9.4e-51  Score=378.06  Aligned_cols=251  Identities=19%  Similarity=0.250  Sum_probs=199.1

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH-
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE-  110 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~-  110 (350)
                      .++.+.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++ +|||||.|++||+|+|++++.... ..... 
T Consensus        24 ~~~~i~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~-~~~~~~  101 (280)
T 2f6q_A           24 GFETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIP-PGGVEE  101 (280)
T ss_dssp             ECSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCC-TTHHHH
T ss_pred             CCCeEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcC-cchhhH
Confidence            355799999999999999999999999999999999999999999999 999999999999999999875321 11111 


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....+....++++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. 
T Consensus       102 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~  181 (280)
T 2f6q_A          102 KAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAK  181 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHHH
Confidence            1222334456778889999999999999999999999999999999999999999999999999999999999999987 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhc
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCF  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f  267 (350)
                      +++|++||++++|+||+++||||+++|++++.+.+.. +.+++..++.++..+|+.++........ ....+.+.+..+|
T Consensus       182 A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~  261 (280)
T 2f6q_A          182 ATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQGRW  261 (280)
T ss_dssp             HHHHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999998765444 4688889999999999998764322111 1222345666777


Q ss_pred             -CcCCHHHHHHHHhccCC
Q 018834          268 -GLDTVEEIIDSLESEAS  284 (350)
Q Consensus       268 -~~~~~~ei~~~lek~~~  284 (350)
                       +.+..+.+.+|++|++|
T Consensus       262 ~s~d~~eg~~af~ekR~p  279 (280)
T 2f6q_A          262 LSDECTNAVVNFLSRKSK  279 (280)
T ss_dssp             TSHHHHC-----------
T ss_pred             CCHHHHHHHHHHHccCCC
Confidence             45666777778888754

>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}

Probab=100.00  E-value=2.9e-51  Score=380.40  Aligned_cols=253  Identities=17%  Similarity=0.199  Sum_probs=208.6

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEc-----CC-CccccCCChhhHHHhhhc
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG-----SG-RAFCAGGDIVSLYHFMNQ  106 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g-----~g-~~F~aG~Dl~~~~~~~~~  106 (350)
                      ++.|+++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||||     .| ++||+|+|++++....  
T Consensus         9 ~~~v~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~--   86 (275)
T 4eml_A            9 YDDILYYKAGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGG--   86 (275)
T ss_dssp             CSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC--------
T ss_pred             CceEEEEEECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhccc--
Confidence            567999999999999999999999999999999999999999999999999999     88 6999999999875421  


Q ss_pred             CChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhcc
Q 018834          107 GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP  186 (350)
Q Consensus       107 ~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~  186 (350)
                       ............+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++
T Consensus        87 -~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~v  165 (275)
T 4eml_A           87 -YIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIV  165 (275)
T ss_dssp             ---------CCCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHH
T ss_pred             -ccchhhHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHh
Confidence             0000001111245677889999999999999999999999999999999999999999999999999998999999999


Q ss_pred             HHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHH
Q 018834          187 GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVD  264 (350)
Q Consensus       187 g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~  264 (350)
                      |.. +++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..+|.++..+|+.++..............+.+.
T Consensus       166 G~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~~~~~~  245 (275)
T 4eml_A          166 GQKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIRCLKAAFNADCDGQAGLQELAGNATL  245 (275)
T ss_dssp             CHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhccchhHHHHHHHHHH
Confidence            998 99999999999999999999999999999987655544 6889999999999999988753211111112234555


Q ss_pred             Hhc-CcCCHHHHHHHHhccCCCCCc
Q 018834          265 KCF-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       265 ~~f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      .++ +.|..|++.+|+||++|+|.+
T Consensus       246 ~~~~s~d~~eg~~AF~ekR~p~f~~  270 (275)
T 4eml_A          246 LYYMTEEGSEGKQAFLEKRPPDFSQ  270 (275)
T ss_dssp             HHHTSHHHHHHHHHHHTTSCCCCTT
T ss_pred             HHhcCHHHHHHHHHHHcCCCCCCCC
Confidence            667 567778888999999998753

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3

Probab=100.00  E-value=1.7e-50  Score=371.35  Aligned_cols=248  Identities=25%  Similarity=0.257  Sum_probs=209.6

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      +.++ +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++...... ........
T Consensus         2 i~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-~~~~~~~~   79 (253)
T 1uiy_A            2 VQVE-KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTEL-GAEENYRH   79 (253)
T ss_dssp             EEEE-CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTS-CHHHHHHH
T ss_pred             EEEE-eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccC-CchhHHHH
Confidence            5678 899999999999999999999999999999999999999999999999999999999988643100 11111111


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA  194 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~  194 (350)
                      ....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++|.. +++|+
T Consensus        80 ~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l~  158 (253)
T 1uiy_A           80 SLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDLL  158 (253)
T ss_dssp             HHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHHH
Confidence            12266788899999999999999999999999999999999999999999999999999999 99999999988 99999


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-CcCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-GLDT  271 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~~~~  271 (350)
                      +||++++|+||+++||||+++|++++.+....+ .+++..+|.++..+|+.++......... ...+...+..++ +.+.
T Consensus       159 ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~  238 (253)
T 1uiy_A          159 LTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVRETGDL  238 (253)
T ss_dssp             HHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHH
T ss_pred             HhCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHH
Confidence            999999999999999999999999987655444 6788899999999999988754433332 223455666777 5677


Q ss_pred             HHHHHHHHhccCCCC
Q 018834          272 VEEIIDSLESEASLI  286 (350)
Q Consensus       272 ~~ei~~~lek~~~~~  286 (350)
                      .+.+.++++|++|.|
T Consensus       239 ~eg~~af~~kr~p~~  253 (253)
T 1uiy_A          239 AEGIRAFFEKRPPRF  253 (253)
T ss_dssp             HHHHHHHHTTSCCCC
T ss_pred             HHHHHHHhCcCCCCC
Confidence            777888899887753

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}

Probab=100.00  E-value=7.1e-51  Score=376.03  Aligned_cols=250  Identities=22%  Similarity=0.276  Sum_probs=205.6

Q ss_pred             cCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCCh
Q 018834           30 DDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL  109 (350)
Q Consensus        30 ~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~  109 (350)
                      .++++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++.......  
T Consensus        11 ~~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~--   88 (265)
T 3qxi_A           11 GDTEPEVLVEQRDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVV--   88 (265)
T ss_dssp             ----CCEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCE--
T ss_pred             CCCCCeEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhh--
Confidence            345778999999999999999999999999999999999999999999999999999999999999999986431110  


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834          110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                      .....+     . +..+.. ||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus        89 ~~~~~~-----~-~~~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~  161 (265)
T 3qxi_A           89 VEGRGL-----G-FTERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYA  161 (265)
T ss_dssp             ETTTEE-----T-TTTSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHH
T ss_pred             hhhhhh-----h-HHHhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHH
Confidence            000000     0 223334 999999999999999999999999999999999999999999999999999999999988


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHh
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKC  266 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~  266 (350)
                       +++|++||++++|+||+++||||+++|++++.+.+..+ .+++..+|.++..+|+.++......... ...+...+..+
T Consensus       162 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~  241 (265)
T 3qxi_A          162 IAMELALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVAATKRIITESRGWSLDTRFAQQMKILFPI  241 (265)
T ss_dssp             HHHHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTTCCTTTHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCcCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHH
Confidence             99999999999999999999999999999987655544 7888999999999999998765443333 33456667777


Q ss_pred             c-CcCCHHHHHHHHhccCCCCCc
Q 018834          267 F-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       267 f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      + +.+..|++.+|++|++|+|.+
T Consensus       242 ~~s~d~~eg~~af~ekr~p~f~g  264 (265)
T 3qxi_A          242 FTSNDAKEGAIAFAEKRPPRWTG  264 (265)
T ss_dssp             HHCHHHHHHHHHHHTTSCCCCCC
T ss_pred             hcCHHHHHHHHHHHcCCCCCCCC
Confidence            7 667788888999999988753

>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A

Probab=100.00  E-value=4.8e-51  Score=387.57  Aligned_cols=256  Identities=16%  Similarity=0.198  Sum_probs=188.9

Q ss_pred             CCCcEEEEEe--CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCC-------ccccCCChhhHHH
Q 018834           32 LCNQVLVEGK--ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-------AFCAGGDIVSLYH  102 (350)
Q Consensus        32 ~~~~v~~~~~--~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~-------~F~aG~Dl~~~~~  102 (350)
                      .++.|++++.  ++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||||.|+       +||+|+|++++..
T Consensus        53 ~~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~  132 (334)
T 3t8b_A           53 DLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGR  132 (334)
T ss_dssp             TCSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC-
T ss_pred             CCceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhc
Confidence            3667999986  999999999999999999999999999999999999999999999995       8999999997642


Q ss_pred             hhh---cC----ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEe-CCeeEecccccccccC
Q 018834          103 FMN---QG----KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHP  174 (350)
Q Consensus       103 ~~~---~~----~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riat-e~a~f~~Pe~~iGl~P  174 (350)
                      ...   ..    ..+....+....+.++..|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p  212 (334)
T 3t8b_A          133 SGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFD  212 (334)
T ss_dssp             ---------------------CCHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSS
T ss_pred             ccccccccccchhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCC
Confidence            100   00    001111122234567788999999999999999999999999999999999 9999999999999999


Q ss_pred             CCchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCC
Q 018834          175 DAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPD  252 (350)
Q Consensus       175 ~~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~  252 (350)
                      ++|++++|+|++|.. +++|++||++++|+||+++||||+|||++++.+.+..+ .+++..+|.+++.+|+.++......
T Consensus       213 ~~gg~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~p~a~~~~K~~l~~~~~~~  292 (334)
T 3t8b_A          213 GGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGL  292 (334)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCCCC
T ss_pred             cccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcch
Confidence            999999999999988 99999999999999999999999999999988655544 7889999999999999998754322


Q ss_pred             cchHHHHHHHHHHhc-CcCCHHHHHHHHhccCCCCC
Q 018834          253 KNSVIHRIDIVDKCF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       253 ~~~~~~~~~~i~~~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      ......+.+.+..+| +.+..|++.+|+||++|.|.
T Consensus       293 ~~~~~~e~~~~~~~~~s~d~~Eg~~AFleKR~P~f~  328 (334)
T 3t8b_A          293 VGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWS  328 (334)
T ss_dssp             ------------------------------------
T ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence            222222344555667 56778888899999988764

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}

Probab=100.00  E-value=8e-51  Score=373.84  Aligned_cols=246  Identities=21%  Similarity=0.279  Sum_probs=211.2

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.+++++++.|+++++|||+|.|++||+|+|++++....   .....
T Consensus         6 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~---~~~~~   82 (256)
T 3trr_A            6 ADEVLIEQRDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGE---AVLSE   82 (256)
T ss_dssp             CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTC---CCEET
T ss_pred             CCceEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhcccc---chhhh
Confidence            457999999999999999999999999999999999999999999999999999999999999999987531   11100


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..     +.+ ..+ .+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        83 ~~-----~~~-~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~  155 (256)
T 3trr_A           83 RG-----LGF-TNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAM  155 (256)
T ss_dssp             TE-----ETT-SSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHHH
T ss_pred             hh-----hhH-HHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHHH
Confidence            01     112 234 89999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-C
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-G  268 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-~  268 (350)
                      +|++||++++|+||+++||||+++|++++.+.+..+ .+++..+|.++..+|+.++.......... ..+...+..++ +
T Consensus       156 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s  235 (256)
T 3trr_A          156 ELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVAATKRIIIESASWAPEEAFAKQGEILMPIFVS  235 (256)
T ss_dssp             HHHHHCCCEEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHhCCCcCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999988655554 78889999999999999987654443333 33466777777 5


Q ss_pred             cCCHHHHHHHHhccCCCCCc
Q 018834          269 LDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~~~  288 (350)
                      .+..|.+.+|++|++|+|.+
T Consensus       236 ~d~~eg~~af~ekr~p~f~g  255 (256)
T 3trr_A          236 EDAKEGAKAFAEKRAPVWQG  255 (256)
T ss_dssp             HHHHHHHHHHHTTSCCCCCC
T ss_pred             HHHHHHHHHHhcCCCCCCCC
Confidence            67777788899999988753

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A

Probab=100.00  E-value=6.7e-51  Score=376.55  Aligned_cols=251  Identities=22%  Similarity=0.294  Sum_probs=209.8

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||||.| ++||+|+|++++...........
T Consensus         8 ~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~~~   87 (267)
T 3r9t_A            8 APGALAERRGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHPDH   87 (267)
T ss_dssp             CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCTTC
T ss_pred             CCcEEEEEECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhHHH
Confidence            35799999999999999999999999999999999999999999999999999999 69999999999875321111100


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                       ..+.   +..+ .+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        88 -~~~~---~~~~-~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A  162 (267)
T 3r9t_A           88 -PEWG---FAGY-VRHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVA  162 (267)
T ss_dssp             -GGGC---GGGT-TTCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHH
T ss_pred             -HhHH---HHHH-HHHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHH
Confidence             0010   0111 23489999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHH---HhccCCCCcch-HHHHHHHHHH
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEK---YSDLVYPDKNS-VIHRIDIVDK  265 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~---~~~~~~~~~~~-~~~~~~~i~~  265 (350)
                      ++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..+|.++..+|+.   ++......... ...+...+..
T Consensus       163 ~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~  242 (267)
T 3r9t_A          163 MRLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQASKRIAYGVDDGVVVGDEPGWDRTMREMRA  242 (267)
T ss_dssp             HHHHHHCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHTTEETTEEGGGHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999988655554 68889999999999999   76644322222 2334667778


Q ss_pred             hcC-cCCHHHHHHHHhccCCCCCc
Q 018834          266 CFG-LDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       266 ~f~-~~~~~ei~~~lek~~~~~~~  288 (350)
                      ++. .+..|++.+|++|++|+|.+
T Consensus       243 ~~~s~d~~eg~~AF~ekR~P~f~g  266 (267)
T 3r9t_A          243 LLKSEDAKEGPRAFAEKREPVWQA  266 (267)
T ss_dssp             HTTSSHHHHHHHHHHTTSCCCCCC
T ss_pred             HhCCHHHHHHHHHHHcCCCCCCCC
Confidence            884 56677788889999988753

>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.6e-51  Score=379.07  Aligned_cols=241  Identities=19%  Similarity=0.207  Sum_probs=189.4

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ..++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||||.|+.||+|+|++++......+.. 
T Consensus         9 ~~~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~-   87 (258)
T 3lao_A            9 SGPGRVTREQRGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAASGF-   87 (258)
T ss_dssp             CSSCCEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTTBC-
T ss_pred             CCCCeEEEEEECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchhhH-
Confidence            3566899999999999999999999999999999999999999999999999999999999999999998754221111 


Q ss_pred             HHHHHHHHHHHHHHHH-hcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834          111 ECKDFFRTLYSFIYLL-GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i-~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                         .+....++++..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus        88 ---~~~~~~~~~~~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~  164 (258)
T 3lao_A           88 ---RYPDGGVDPWGVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWT  164 (258)
T ss_dssp             ---CCCTTCCCTTSCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHH
T ss_pred             ---HHHHHHHHHHHHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHH
Confidence               1122223455678 899999999999999999999999999999999999999999999999999999999999988


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcC
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFG  268 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~  268 (350)
                       +++|++||++++|+||+++||||+|+|++++.+.+..                                          
T Consensus       165 ~A~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~------------------------------------------  202 (258)
T 3lao_A          165 DAMRYILTGDEFDADEALRMRLLTEVVEPGEELARALE------------------------------------------  202 (258)
T ss_dssp             HHHHHHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHH------------------------------------------
T ss_pred             HHHHHHHcCCCCCHHHHHHcCCCcEeeChhHHHHHHHH------------------------------------------
Confidence             9999999999999999999999999999886533221                                          


Q ss_pred             cCCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          269 LDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                                               ..+.+.+++|.++..++++++++..   .+++++++.|.+.+..++.++|.+
T Consensus       203 -------------------------~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~~  251 (258)
T 3lao_A          203 -------------------------YAERIARAAPLAVRAALQSAFQGRD---EGDDAALSRVNESLAALIGSEDVR  251 (258)
T ss_dssp             -------------------------HHHHHHHSCHHHHHHHHHHHHHHTC---------------------------
T ss_pred             -------------------------HHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHHH
Confidence                                     2244567899999999999999988   899999999999999999988864

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*

Probab=100.00  E-value=1.7e-50  Score=372.73  Aligned_cols=249  Identities=23%  Similarity=0.331  Sum_probs=210.9

Q ss_pred             CCcEEEEE---eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCCh
Q 018834           33 CNQVLVEG---KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL  109 (350)
Q Consensus        33 ~~~v~~~~---~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~  109 (350)
                      ++.+.++.   .++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||+|.|+.||+|+|++++...    ..
T Consensus         3 ~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~   78 (260)
T 1mj3_A            3 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNR----TF   78 (260)
T ss_dssp             CSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTC----CH
T ss_pred             cccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcc----cc
Confidence            45678887   789999999999999999999999999999999999999999999999999999999987421    11


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834          110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                      .  ..+.......+..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus        79 ~--~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~  156 (260)
T 1mj3_A           79 Q--DCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKS  156 (260)
T ss_dssp             H--HHHHC--CCGGGGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHH
T ss_pred             h--HHHHHHHHHHHHHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHH
Confidence            1  11222222345678899999999999999999999999999999999999999999999999999999999999987


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHh
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKC  266 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~  266 (350)
                       +++|++||++++|+||+++||||+++|++++.+.... +.+++..+|.++..+|+.++.......... ..+...+..+
T Consensus       157 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~  236 (260)
T 1mj3_A          157 LAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYST  236 (260)
T ss_dssp             HHHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHcCCcCCHHHHHHcCCccEEeChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Confidence             9999999999999999999999999999998765444 468888999999999999987654433332 2345566777


Q ss_pred             c-CcCCHHHHHHHHhccCCCCC
Q 018834          267 F-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       267 f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      + +.+..+.+.++++|++|.|.
T Consensus       237 ~~s~d~~egi~af~~kr~p~~~  258 (260)
T 1mj3_A          237 FATDDRREGMSAFVEKRKANFK  258 (260)
T ss_dssp             GGSHHHHHHHHHHHTTSCCCCC
T ss_pred             hcCHHHHHHHHHHHcCCCCCCC
Confidence            7 56777778888999988764

>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}

Probab=100.00  E-value=2.3e-50  Score=374.24  Aligned_cols=253  Identities=18%  Similarity=0.229  Sum_probs=207.1

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCC-ccccCCChhhHHHhhhcCChH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      .++.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||||.|+ +||+|+|++++........ .
T Consensus        11 ~~~~i~~~~~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~-~   89 (273)
T 2uzf_A           11 EYDEIKYEFYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGYVGE-D   89 (273)
T ss_dssp             CCSSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC--------CC-S
T ss_pred             CCceEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhccccchh-h
Confidence            3557999999999999999999999999999999999999999999999999999998 9999999998753110000 0


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ...  ....+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. 
T Consensus        90 ~~~--~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~  167 (273)
T 2uzf_A           90 QIP--RLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKK  167 (273)
T ss_dssp             SSC--CCTHHHHHHHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHH
T ss_pred             hHH--HhhHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHH
Confidence            000  00134566778899999999999999999999999999999999999999999999999999999999999987 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHH-HHHHHhc
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRI-DIVDKCF  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~i~~~f  267 (350)
                      +++|++||+.++|+||+++||||+++|++++.+... .+.+++..++.++..+|+.++... ........+. ..+..++
T Consensus       168 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~-~~~~~l~~e~~~~~~~~~  246 (273)
T 2uzf_A          168 AREIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALRFLKAAMNADT-DGLAGLQQMAGDATLLYY  246 (273)
T ss_dssp             HHHHHHTCCCEEHHHHHHHTSSSEEECGGGSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHH-SHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCHHHHHHcCCCccccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999988876544 446888999999999999887221 1111222234 5566677


Q ss_pred             -CcCCHHHHHHHHhccCCCCCc
Q 018834          268 -GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       268 -~~~~~~ei~~~lek~~~~~~~  288 (350)
                       +.+..+++.++++|++|.|.+
T Consensus       247 ~s~d~~egi~af~ekr~p~f~~  268 (273)
T 2uzf_A          247 TTDEAKEGRDAFKEKRDPDFDQ  268 (273)
T ss_dssp             TSHHHHHHHHHHHTTSCCCCSS
T ss_pred             cChHHHHHHHHHHhcCCCCCCC
Confidence             567777888889999887753

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*

Probab=100.00  E-value=3.3e-50  Score=368.77  Aligned_cols=243  Identities=16%  Similarity=0.201  Sum_probs=193.2

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEc-CCCccccCCChhhHHHhhhcCChHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG-SGRAFCAGGDIVSLYHFMNQGKLEECKD  114 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~~~~  114 (350)
                      |.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+| .|++||+|+|++++...   ...+....
T Consensus         2 v~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~---~~~~~~~~   78 (250)
T 2a7k_A            2 VFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQL---SRSEDIEE   78 (250)
T ss_dssp             EEEEEETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC----CHHHHHH
T ss_pred             eEEEeeCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhc---CchhhHHH
Confidence            678889999999999999999999999999999999999999999999999 89999999999987642   11122244


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHH
Q 018834          115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL  193 (350)
Q Consensus       115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l  193 (350)
                      ++...++++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|+|++|.. +++|
T Consensus        79 ~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l  157 (250)
T 2a7k_A           79 WIDRVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEI  157 (250)
T ss_dssp             HHHHHHHHHHHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHH
Confidence            55667788899999999999999999999999999999999999999999999999999999999 999999987 9999


Q ss_pred             hhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-CcC
Q 018834          194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-GLD  270 (350)
Q Consensus       194 ~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-~~~  270 (350)
                      ++||++++|+||+++||||+++|++++.+.... +.+++..+|.++..+|+.++......... ...+...+..++ +.+
T Consensus       158 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d  237 (250)
T 2a7k_A          158 IYQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFINTKRAVNKPFIHLLEQTRDASKAVHKAAFQARD  237 (250)
T ss_dssp             HHHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------
T ss_pred             HHcCCcccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHH
Confidence            999999999999999999999998888765444 46888899999999999887643211111 122334445566 456


Q ss_pred             CHHHHHHHHhcc
Q 018834          271 TVEEIIDSLESE  282 (350)
Q Consensus       271 ~~~ei~~~lek~  282 (350)
                      ..+.+.++++|+
T Consensus       238 ~~eg~~af~ekr  249 (250)
T 2a7k_A          238 AQGHFKNVLGKK  249 (250)
T ss_dssp             ------------
T ss_pred             HHHHHHHHHhcC
Confidence            666677777765

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A

Probab=100.00  E-value=9.1e-50  Score=370.04  Aligned_cols=250  Identities=18%  Similarity=0.245  Sum_probs=212.1

Q ss_pred             CcEEEEE----eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCC
Q 018834           34 NQVLVEG----KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGK  108 (350)
Q Consensus        34 ~~v~~~~----~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~  108 (350)
                      +.++++.    +++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||+|.| ++||+|+|++++...    .
T Consensus         8 ~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~----~   83 (272)
T 1hzd_A            8 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKM----S   83 (272)
T ss_dssp             CSEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTS----C
T ss_pred             CcEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhcc----C
Confidence            3455553    689999999999999999999999999999999999999999999998 899999999987532    2


Q ss_pred             hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHH
Q 018834          109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       109 ~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      ......++...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.
T Consensus        84 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~  163 (272)
T 1hzd_A           84 SSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGM  163 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCH
Confidence            23344555667788899999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH-----HHHHHHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHH
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL-----IEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRID  261 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-----~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~  261 (350)
                      . +++|++||++++|+||+++||||+++|++++.+     +.+...+++..+|.++..+|+.++.......... ..+..
T Consensus       164 ~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~  243 (272)
T 1hzd_A          164 SLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEA  243 (272)
T ss_dssp             HHHHHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCcCCHHHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence            7 999999999999999999999999999988632     2333357788899999999999876544333322 23455


Q ss_pred             HHHHhc-CcCCHHHHHHHHhccCCCCC
Q 018834          262 IVDKCF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       262 ~i~~~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      .+..++ +.+..+.+.+|++|++|.|.
T Consensus       244 ~~~~~~~s~d~~egi~af~ekr~p~~~  270 (272)
T 1hzd_A          244 CYAQTIPTKDRLEGLLAFKEKRPPRYK  270 (272)
T ss_dssp             HHHTTTTCHHHHHHHHHHTTTSCCCCC
T ss_pred             HHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence            666777 46677778888999988775

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*

Probab=100.00  E-value=1.4e-50  Score=373.50  Aligned_cols=249  Identities=18%  Similarity=0.169  Sum_probs=210.6

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEc-CC-CccccCCChhhHHHhhhcCChH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKG-SG-RAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g-~g-~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|+ +++||||| .| ++||+|+|++++..... ..  
T Consensus         3 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~-~~--   78 (261)
T 1ef8_A            3 YQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGR-DP--   78 (261)
T ss_dssp             CSSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC------CT--
T ss_pred             cceEEEEEeCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCc-hh--
Confidence            456899999999999999999999999999999999999999999 99999999 99 99999999998754211 11  


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                        ..++...++++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. 
T Consensus        79 --~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~  156 (261)
T 1ef8_A           79 --LSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHI  156 (261)
T ss_dssp             --TCTTSHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHH
T ss_pred             --HHHHHHHHHHHHHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHHH
Confidence              11223346778889999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCC-cchHHHHHHHHH--H
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVD--K  265 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~i~--~  265 (350)
                      +++|++||+.++|+||+++||||+++|++++.+.+.. +.+++..+|.++..+|+.++...... ......+...+.  .
T Consensus       157 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~  236 (261)
T 1ef8_A          157 VKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRA  236 (261)
T ss_dssp             HHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHhhHHH
Confidence            9999999999999999999999999998887765444 46888899999999999887643322 223333455555  6


Q ss_pred             hc-CcCCHHHHHHHHhccCCCCC
Q 018834          266 CF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      ++ +.+..+.+.++++|++|.|.
T Consensus       237 ~~~s~d~~eg~~af~ekr~p~~~  259 (261)
T 1ef8_A          237 VYDSEDYQEGMNAFLEKRKPNFV  259 (261)
T ss_dssp             HHTSHHHHHHHHHHHTTSCCCCC
T ss_pred             hhcCHHHHHHHHHHHccCCCCCC
Confidence            67 56777888889999988765

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A

Probab=100.00  E-value=1.4e-50  Score=371.94  Aligned_cols=241  Identities=22%  Similarity=0.324  Sum_probs=189.2

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||+|.|++||+|+|++++...         
T Consensus         8 ~~~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~---------   78 (256)
T 3pe8_A            8 SPVLLVDTTDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDT---------   78 (256)
T ss_dssp             CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC------------
T ss_pred             CCcEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhh---------
Confidence            45799999999999999999999999999999999999999999999999999999999999999987532         


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                          .....+...+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. ++
T Consensus        79 ----~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~  154 (256)
T 3pe8_A           79 ----TELPDISPKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLAR  154 (256)
T ss_dssp             ----------CCCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHH
T ss_pred             ----HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHH
Confidence                0112234678899999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHh---
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKC---  266 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~---  266 (350)
                      +|++||++++|+||+++||||+++|++++.+.+..+ .+++..+|.++..+|+.++......... ...+...+...   
T Consensus       155 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~  234 (256)
T 3pe8_A          155 RMSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVRALLDSYHRIDALQTGGALWAEAEAARQWMRS  234 (256)
T ss_dssp             HHHHHCCCEEHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999987655555 6888999999999999987654322222 22233333332   


Q ss_pred             c-CcCCHHHHHHHHhccCCCC
Q 018834          267 F-GLDTVEEIIDSLESEASLI  286 (350)
Q Consensus       267 f-~~~~~~ei~~~lek~~~~~  286 (350)
                      + +.+..+.+.++++|++|+|
T Consensus       235 ~~~~d~~e~~~aflek~k~~~  255 (256)
T 3pe8_A          235 TSGDDIAASRASVIERGRSQV  255 (256)
T ss_dssp             C--------------------
T ss_pred             ccchHHHHHHHHHHhccCccC
Confidence            3 3355777888899987654

>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}

Probab=100.00  E-value=4.8e-49  Score=361.68  Aligned_cols=239  Identities=15%  Similarity=0.148  Sum_probs=202.7

Q ss_pred             cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834           35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD  114 (350)
Q Consensus        35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~  114 (350)
                      .|.++++++|++||||||+++|+||.+|+.+|.++++.++. +++++|||+|.|++||+|+|++++...    .......
T Consensus         8 ~v~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~----~~~~~~~   82 (254)
T 3isa_A            8 PLAIERRPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQ----SEGDLLL   82 (254)
T ss_dssp             SEEEEECSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTS----CHHHHHH
T ss_pred             eEEEEEECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhcc----CchhHHH
Confidence            38999999999999999999999999999999999999987 589999999999999999999987532    2223334


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHH
Q 018834          115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL  193 (350)
Q Consensus       115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l  193 (350)
                      .+...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|   ++++|+|++|.. +++|
T Consensus        83 ~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l  159 (254)
T 3isa_A           83 RMVRIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSI  159 (254)
T ss_dssp             HHHHHHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHH
Confidence            455667888999999999999999999999999999999999999999999999999998   479999999988 9999


Q ss_pred             hhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-CcCC
Q 018834          194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-GLDT  271 (350)
Q Consensus       194 ~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-~~~~  271 (350)
                      ++||++++|+||+++||||+++|++++.+....+ ++++..++.++...|+.+...      ....+...+..+| +.+.
T Consensus       160 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~------~~~~e~~~~~~~~~s~d~  233 (254)
T 3isa_A          160 LGSARAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRATLHRVLRDD------HDDADLAALARSAAQPGF  233 (254)
T ss_dssp             HTTTCEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCHHHHHHHHHHHSCC------CHHHHHHHHHHHHHSTTH
T ss_pred             HHhCCCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHHHHHHHHhhh------hHHHHHHHHHHHhCCHHH
Confidence            9999999999999999999999999988755554 688889999999999988532      1223445566677 5677


Q ss_pred             HHHHHHHHhccCCCCC
Q 018834          272 VEEIIDSLESEASLIN  287 (350)
Q Consensus       272 ~~ei~~~lek~~~~~~  287 (350)
                      .+.+.+|++|++|.+.
T Consensus       234 ~egi~af~ekr~p~~~  249 (254)
T 3isa_A          234 KARIRDYLAQPAAEGH  249 (254)
T ss_dssp             HHHHHHHHHC------
T ss_pred             HHHHHHHHhcCCCCCC
Confidence            7778899999987654

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}

Probab=100.00  E-value=1.5e-49  Score=366.88  Aligned_cols=245  Identities=20%  Similarity=0.219  Sum_probs=202.6

Q ss_pred             cEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhh--hcCChHH
Q 018834           35 QVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFM--NQGKLEE  111 (350)
Q Consensus        35 ~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~--~~~~~~~  111 (350)
                      .+.++. +++|++||||||++ |+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....  .......
T Consensus         7 ~~~~~~~~~~v~~itlnrP~~-Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~   85 (263)
T 3l3s_A            7 GLLGEVLSEGVLTLTLGRAPA-HPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGRAF   85 (263)
T ss_dssp             -CEEEEESSSEEEEEECSTTT-CCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSHHH
T ss_pred             ceEEEEeeCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccHHH
Confidence            455565 89999999999999 9999999999999999999999999999999999999999999876431  1223455


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...++...+.++.+|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|.. +
T Consensus        86 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-~~g~~~~l~r~vG~~~A  164 (263)
T 3l3s_A           86 VTDLFEACSALMLDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGF-CTTPAVAVSRVIGRRAV  164 (263)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSC-CHHHHHHHHTTSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCC-CccHHHHHHHHcCHHHH
Confidence            56777888899999999999999999999999999999999999999999999999999999 577999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhcC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCFG  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f~  268 (350)
                      ++|++||++++|+||+++||||+++|++++.+.+..+ .+++..+|.++..+|+.++........... .+...+..+|.
T Consensus       165 ~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~  244 (263)
T 3l3s_A          165 TEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARNQAPLRRGLETLNRHLELPLEQAYALATPVMVEHFM  244 (263)
T ss_dssp             HHHHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999998887655544 688899999999999999886654433333 34677888887


Q ss_pred             cCCHHHHHHHHhc
Q 018834          269 LDTVEEIIDSLES  281 (350)
Q Consensus       269 ~~~~~ei~~~lek  281 (350)
                      .++..|.+++++.
T Consensus       245 s~d~~Eg~~Af~~  257 (263)
T 3l3s_A          245 DPGRRHLDWIDEG  257 (263)
T ss_dssp             -------------
T ss_pred             CHHHHHHHHHhhc
Confidence            6666666655543

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}

Probab=100.00  E-value=2e-49  Score=370.32  Aligned_cols=248  Identities=15%  Similarity=0.150  Sum_probs=209.6

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCC-ccccCCChhhHHHhhhcCCh
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQGKL  109 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~  109 (350)
                      ..++.|.++++++|++||||||+ +|+||.+|+.+|.++++.++.|++||+|||||.|+ +||+|+|++++....... .
T Consensus         5 ~~~~~v~~~~~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~-~   82 (289)
T 3h0u_A            5 ASYETIKARLDGTVLSATFNAPP-MNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEA-A   82 (289)
T ss_dssp             CCCSSEEEEEETTEEEEEECCTT-TCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHH-H
T ss_pred             CCCCeEEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcch-h
Confidence            34678999999999999999998 79999999999999999999999999999999995 566677999986531110 0


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHH
Q 018834          110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      .....++...++++.+|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++|.
T Consensus        83 ~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~  162 (289)
T 3h0u_A           83 KAGGPGDASLGMLFRKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGR  162 (289)
T ss_dssp             TTSSTTCCSHHHHHHHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCH
T ss_pred             hhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCH
Confidence            000023345667888999999999999999999999999999999999998 9999999999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHh
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC  266 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (350)
                      . +++|++||++++|+||+++||||+|+|++++.+.+..+ .+++..+|.++..+|+.++............+...+..+
T Consensus       163 ~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~~~K~~l~~~~~~l~~~l~~e~~~~~~~  242 (289)
T 3h0u_A          163 GRALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALIAAKSAINAISLPAPAEVRADAALFQQL  242 (289)
T ss_dssp             HHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccHHHHHHHHHHHHHHH
Confidence            8 99999999999999999999999999998887655544 688899999999999999876543233333456677788


Q ss_pred             cC-cCCHHHHHHHHh
Q 018834          267 FG-LDTVEEIIDSLE  280 (350)
Q Consensus       267 f~-~~~~~ei~~~le  280 (350)
                      +. .+..|++.+|++
T Consensus       243 ~~s~d~~egi~AFle  257 (289)
T 3h0u_A          243 VRGEKVQQRTAELFK  257 (289)
T ss_dssp             TTSHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHHHHhC
Confidence            84 566777778888

>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*

Probab=100.00  E-value=3.8e-49  Score=357.88  Aligned_cols=210  Identities=21%  Similarity=0.190  Sum_probs=185.0

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      |++.|.++++++|++||||||+ .|+||.+|+.+|.++++.++.| ++++|||||.|++||+|+|++++...    +.+.
T Consensus         3 M~~~v~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~----~~~~   76 (233)
T 3r6h_A            3 MSGPVTYTHDDAIGVIRMDDGK-VNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSG----EAKP   76 (233)
T ss_dssp             --CCEEEEEETTEEEEEECCSS-SCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC-------CHH
T ss_pred             CCCceEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhcc----ChHH
Confidence            3457999999999999999995 6999999999999999999987 58999999999999999999998642    2344


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...++...++++..|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|+.|++++|++++|.. +
T Consensus        77 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a  156 (233)
T 3r6h_A           77 AIDMLRGGFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAY  156 (233)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHH
Confidence            566778888999999999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhc
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSD  247 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~  247 (350)
                      +++++||++++|+||+++||||+++|++++.+.+..+ .+++..+|.++..+|+.++.
T Consensus       157 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~  214 (233)
T 3r6h_A          157 QQAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHNATKLRARA  214 (233)
T ss_dssp             HHHHHSCCEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSCHHHHHHHHHHTTH
T ss_pred             HHHHHcCCcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999998887644444 56667777777777776654

>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D

Probab=100.00  E-value=1.3e-48  Score=360.11  Aligned_cols=224  Identities=15%  Similarity=0.114  Sum_probs=196.0

Q ss_pred             cCCCCCCcccCCCCcEEEEEeC-CEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhh
Q 018834           21 QHRTSSSVTDDLCNQVLVEGKA-NSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVS   99 (350)
Q Consensus        21 ~~~~~~~~~~~~~~~v~~~~~~-~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~   99 (350)
                      +++++.......++.|.+++++ +|++||||||++.|+||.+|+.+|.++|+.++.|+++++|||+|.|++||+|+|+++
T Consensus        10 ~~~~~~~~~~~~~~~i~~~~~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~   89 (263)
T 2j5g_A           10 HMTLNQPEYFTKYENLHFHRDENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPS   89 (263)
T ss_dssp             -----CCGGGGSCTTEEEEECTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGG
T ss_pred             ccCCCcccccCCCCeEEEEEcCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHH
Confidence            3455566666677889999999 999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEec-ccccccccCCCch
Q 018834          100 LYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT-PETLIGFHPDAGA  178 (350)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~-Pe~~iGl~P~~G~  178 (350)
                      +...   .+.+....++...+.++..|.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|+
T Consensus        90 ~~~~---~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~  165 (263)
T 2j5g_A           90 LGDV---TNPREWDKTYWEGKKVLQNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGV  165 (263)
T ss_dssp             GCCT---TSHHHHHHHHHHHHHHHHHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSH
T ss_pred             Hhcc---CCHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccH
Confidence            7532   122333345555677888999999999999999999 6999999999999999999999 9999999999999


Q ss_pred             HHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhcc
Q 018834          179 SFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDL  248 (350)
Q Consensus       179 s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~  248 (350)
                      +++|+|++|.. +++|++||++++|+||+++||||+++|++++.+.+.. +.+++..+|.++..+|+.++..
T Consensus       166 ~~~L~r~vG~~~A~~llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~  237 (263)
T 2j5g_A          166 HILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLRYTRVALTQR  237 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCHHHHHHHHHcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence            99999999987 9999999999999999999999999999888765444 4688899999999999988753

>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A

Probab=100.00  E-value=2.6e-49  Score=364.71  Aligned_cols=246  Identities=15%  Similarity=0.122  Sum_probs=202.7

Q ss_pred             cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcC-CCccccCCChhhHHHhhhcCChHHHH
Q 018834           35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-GRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      .+.++.+++|++||||||+ .|+||.+|+.+|.++|+.++.|+++++|||+|. |++||+|+|++++..    .+.+...
T Consensus         6 ~v~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~----~~~~~~~   80 (260)
T 1sg4_A            6 LVEPDAGAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCG----RSPAHYA   80 (260)
T ss_dssp             EEEEETTTTEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSS----CCHHHHH
T ss_pred             EEEEEecCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhc----cCHHHHH
Confidence            3567778999999999997 699999999999999999999999999999999 699999999998752    1223344


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEe--CCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC--GKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riat--e~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      .++...+.++..|.++||||||+|||+|+|||++|+++||+|||+  ++++|++||+++|++|++|++++|++++|.. +
T Consensus        81 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a  160 (260)
T 1sg4_A           81 GYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAA  160 (260)
T ss_dssp             HHHHHHHHHHHHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHH
Confidence            566667788899999999999999999999999999999999999  8999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHH-HHHHhccCCHHHHHHHHHHHhccCCCC-cchHHHHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEE-ELGKLVTDDPSVIEACLEKYSDLVYPD-KNSVIHRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~-~l~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~i~~~f-  267 (350)
                      ++|++||++++|+||+++||||+++|++++.+.+. .+.+++..+|.++..+|+.++...... ......+...+..+| 
T Consensus       161 ~~llltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~  240 (260)
T 1sg4_A          161 ERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKATASRLVTQRDADVQNFVSFIS  240 (260)
T ss_dssp             HHHHHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHT
T ss_pred             HHHHHcCCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHhC
Confidence            99999999999999999999999999988876544 446888899999999999887543211 112223455666677 


Q ss_pred             CcCCHHHHHHHHhccCCC
Q 018834          268 GLDTVEEIIDSLESEASL  285 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~  285 (350)
                      +.+..+.+.+|++|++|+
T Consensus       241 s~d~~eg~~af~ekr~~~  258 (260)
T 1sg4_A          241 KDSIQKSLQMYLERLKEE  258 (260)
T ss_dssp             SHHHHHHHTC--------
T ss_pred             CHHHHHHHHHHHHhhccc
Confidence            456666777788887653

>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A

Probab=100.00  E-value=8.4e-49  Score=365.07  Aligned_cols=241  Identities=15%  Similarity=0.093  Sum_probs=199.3

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCC---hH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK---LE  110 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---~~  110 (350)
                      +.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||||.|++||+|+|++++........   ..
T Consensus         9 ~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~~   88 (280)
T 1pjh_A            9 EKISYRIEGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYPS   88 (280)
T ss_dssp             TTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCSS
T ss_pred             CceEEEEECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhcccccccchhh
Confidence            569999999999999999999999999999999999999999999999999999999999999998753211110   01


Q ss_pred             ----HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEe-CCeeEecccccccccCCCchHHHHhhc
Q 018834          111 ----ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSHL  185 (350)
Q Consensus       111 ----~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riat-e~a~f~~Pe~~iGl~P~~G~s~~L~rl  185 (350)
                          ....++...+.++..|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|+|+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~~l~r~  168 (280)
T 1pjh_A           89 ETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPLK  168 (280)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHHHHHHH
Confidence                112233444678888999999999999999999999999999999999 999999999999999999999999999


Q ss_pred             cHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCC-----ChHHHH--HHHHHhccCCHHHHHHHHHHHhccCCCCcchHH
Q 018834          186 PGHL-GEFLALTGAKLNGAEMMACGLATHYSVSE-----KLPLIE--EELGKLVTDDPSVIEACLEKYSDLVYPDKNSVI  257 (350)
Q Consensus       186 ~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~-----~l~~~~--~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~  257 (350)
                      +|.. +++|++||++++|+||+++||||+|+|++     ++.+.+  +.+.+++..+|.++..+|+.++....    .. 
T Consensus       169 vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~~~~K~~l~~~~~----~~-  243 (280)
T 1pjh_A          169 FGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCLGMKKLLKSNHI----DA-  243 (280)
T ss_dssp             HCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTTH----HH-
T ss_pred             hCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhHH----HH-
Confidence            9988 99999999999999999999999999986     465433  45578889999999999999886431    11 


Q ss_pred             HHHHHHHHhcCcCCHHHHHHHHhccCC
Q 018834          258 HRIDIVDKCFGLDTVEEIIDSLESEAS  284 (350)
Q Consensus       258 ~~~~~i~~~f~~~~~~ei~~~lek~~~  284 (350)
                           ++...+.+..+.+.++++++.|
T Consensus       244 -----l~~~~~~d~~e~~~af~~kr~~  265 (280)
T 1pjh_A          244 -----FNKANSVEVNESLKYWVDGEPL  265 (280)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHTHHH
T ss_pred             -----HHHhhhHHHHHHHHHHhCCccH
Confidence                 1112233455566666776643

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A

Probab=100.00  E-value=3.5e-49  Score=360.30  Aligned_cols=235  Identities=18%  Similarity=0.227  Sum_probs=199.7

Q ss_pred             cEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHH
Q 018834           35 QVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKD  114 (350)
Q Consensus        35 ~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~  114 (350)
                      ...++++++|++||||||+++|+||.+|+.+|.+++++++.|+++++|||||.|++||+|+|++++.... .+..     
T Consensus         4 ~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~-~~~~-----   77 (243)
T 2q35_A            4 VQLTELGNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKT-RGEV-----   77 (243)
T ss_dssp             EEEEEEETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHH-TTCC-----
T ss_pred             eEEEEeeCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhcc-chhh-----
Confidence            4567889999999999999999999999999999999999999999999999999999999999876431 1111     


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHH
Q 018834          115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL  193 (350)
Q Consensus       115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l  193 (350)
                         ..++++..|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|.. +++|
T Consensus        78 ---~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l  154 (243)
T 2q35_A           78 ---EVLDLSGLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEM  154 (243)
T ss_dssp             ---CCCCCHHHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHH
T ss_pred             ---HHHHHHHHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHH
Confidence               124566778999999999999999999999999999999999999999999999999999999999999987 9999


Q ss_pred             hhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcc-hHHHHHHHHHHhcCcCC
Q 018834          194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKN-SVIHRIDIVDKCFGLDT  271 (350)
Q Consensus       194 ~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~i~~~f~~~~  271 (350)
                      ++||++++|+||+++||||+++|++++.+.... +.+++..+|.++..+|+.++........ ....+...+..+|..++
T Consensus       155 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d  234 (243)
T 2q35_A          155 IYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLVALKQHLSADIKAKFPEAIKKELEIHQVTFNQPE  234 (243)
T ss_dssp             HHHCCCEEHHHHHHTTCSSCEECHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTT
T ss_pred             HHcCCCCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHH
Confidence            999999999999999999999998888765444 4688889999999999988764322111 22234556677787666


Q ss_pred             HHHHHHH
Q 018834          272 VEEIIDS  278 (350)
Q Consensus       272 ~~ei~~~  278 (350)
                      ..|.+++
T Consensus       235 ~~eg~~a  241 (243)
T 2q35_A          235 IASRIQQ  241 (243)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHhh
Confidence            6666543

>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.8e-48  Score=353.20  Aligned_cols=206  Identities=14%  Similarity=0.107  Sum_probs=180.2

Q ss_pred             CcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           34 NQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        34 ~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +.|.++++++|++||||||+ .|+||.+|+.+|.++++.++.|+  ++|||||.|++||+|+|++++...     .+...
T Consensus         6 ~~v~~~~~~~v~~itlnrp~-~Nal~~~~~~~L~~al~~~~~d~--~~vvltg~g~~F~aG~Dl~~~~~~-----~~~~~   77 (232)
T 3ot6_A            6 DLVSYHLDDGVATLTLNNGK-VNAISPDVIIAFNAALDQAEKDR--AIVIVTGQPGILSGGYDLKVMTSS-----AEAAI   77 (232)
T ss_dssp             HHEEEEEETTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHHTT--CEEEEECBTEEEECCBCHHHHHHC-----HHHHH
T ss_pred             cceEEEEECCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHhcCC--CEEEEECCCCCccCCcCHHHHhhC-----hHHHH
Confidence            46899999999999999996 69999999999999999999874  899999999999999999998642     33445


Q ss_pred             HHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          114 DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      +++...+.++.+|.++|||+||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|+.|+++++++++|.. ++
T Consensus        78 ~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~  157 (232)
T 3ot6_A           78 NLVAQGSTLARRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFN  157 (232)
T ss_dssp             HHHHHHHHHHHHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHH
Confidence            67777888999999999999999999999999999999999999998 89999999999998888888898888887 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhc
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSD  247 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~  247 (350)
                      +|++||++++|+||+++||||+++|++++.+....+ .+++..+|.+++.+|+.++.
T Consensus       158 ~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~  214 (232)
T 3ot6_A          158 RSVINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHKKTKLKVRK  214 (232)
T ss_dssp             HHHTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred             HHHHcCCccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence            999999999999999999999999999887644443 45555566666666555543

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A

Probab=100.00  E-value=2.1e-47  Score=359.44  Aligned_cols=246  Identities=13%  Similarity=0.161  Sum_probs=204.7

Q ss_pred             CCcEE--EEEeCCEEEEEEcCCCCC----CCCCHHHHHHHHHHHHHHHc-----CCCceEEEEEcCCCccccCCChhhHH
Q 018834           33 CNQVL--VEGKANSRMAILNRPSAL----NALNTNMGAKLNKLFKAWEN-----DPNIGFVSMKGSGRAFCAGGDIVSLY  101 (350)
Q Consensus        33 ~~~v~--~~~~~~v~~ItLnrp~~~----Nal~~~m~~~L~~~l~~~~~-----d~~v~~vvl~g~g~~F~aG~Dl~~~~  101 (350)
                      ++.+.  ++++++|++||||||++.    |+||.+|+.+|.++|+.++.     |++|++|||+|.|++||+|+|++++.
T Consensus        29 y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~  108 (305)
T 3m6n_A           29 GSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFC  108 (305)
T ss_dssp             CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHH
T ss_pred             CceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHH
Confidence            44554  467899999999999984    59999999999999999987     58999999999999999999999987


Q ss_pred             HhhhcCChHHHHHHHHHHHHHHHHH---hcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCch
Q 018834          102 HFMNQGKLEECKDFFRTLYSFIYLL---GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGA  178 (350)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~l~~~i---~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~  178 (350)
                      .....+..+....++...+..+..+   ..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~  188 (305)
T 3m6n_A          109 QLIREGDRARLLDYAQRCVRGVHAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMGA  188 (305)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHHHHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSH
T ss_pred             hccccccHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCccH
Confidence            6533333344455666666665554   5689999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH
Q 018834          179 SFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV  256 (350)
Q Consensus       179 s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~  256 (350)
                      +++|+|++|.. +++|++||++++|+||+++|||++|+|++++.+.+..+ .+++. +|.++..+|+.++..........
T Consensus       189 ~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~-~p~a~~~~K~~l~~~~~~~l~~~  267 (305)
T 3m6n_A          189 YSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKR-TPHAWAAMQQVREMTTAVPLEEM  267 (305)
T ss_dssp             HHHHTTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHTT-CHHHHHHHHHHHHTTTCCCHHHH
T ss_pred             HHHHHHHhcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHHHHHHhh-ChHHHHHHHHHHHhhhcCCHHHH
Confidence            99999999988 99999999999999999999999999999998766555 56664 88999999999988665444333


Q ss_pred             H-HHHHHHHHhcC-cCCHHHHHHHH
Q 018834          257 I-HRIDIVDKCFG-LDTVEEIIDSL  279 (350)
Q Consensus       257 ~-~~~~~i~~~f~-~~~~~ei~~~l  279 (350)
                      . .+...+..+|. .+....+++++
T Consensus       268 l~~e~~~~~~~~~s~d~~~~~m~~l  292 (305)
T 3m6n_A          268 MRITEIWVDTAMQLGEKSLRTMDRL  292 (305)
T ss_dssp             HHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCchHHHHHHHHH
Confidence            3 35678888885 44555566655

>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A

Probab=100.00  E-value=7.4e-48  Score=358.36  Aligned_cols=254  Identities=17%  Similarity=0.196  Sum_probs=200.6

Q ss_pred             CCCcccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhh
Q 018834           25 SSSVTDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFM  104 (350)
Q Consensus        25 ~~~~~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~  104 (350)
                      ++.+....++.|+++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|++||+|+|++++....
T Consensus        11 ~~~p~~~~~~~v~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~   90 (279)
T 3t3w_A           11 PSRPEQRTEMYIDYDVSDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVP   90 (279)
T ss_dssp             --------CCSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC------
T ss_pred             CCCCccccCCeEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcc
Confidence            34444555678999999999999999999999999999999999999999999999999999999999999999886542


Q ss_pred             hcCChH-HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHh
Q 018834          105 NQGKLE-ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLS  183 (350)
Q Consensus       105 ~~~~~~-~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~  183 (350)
                      ...... .........+.++.+|.++|||+||+|||+|+|||++|+++||+|||+++++|++||+++|+.| .|+..+ +
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~~-~~~~~~-~  168 (279)
T 3t3w_A           91 DKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDIGG-VEYHGH-T  168 (279)
T ss_dssp             --CCHHHHHHHHHHHTHHHHHHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTCSS-CSSCCH-H
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCCCC-chHHHH-H
Confidence            221211 1222334456678889999999999999999999999999999999999999999999999954 444444 8


Q ss_pred             hccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHH
Q 018834          184 HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRID  261 (350)
Q Consensus       184 rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  261 (350)
                      |++|.. +++|++||++++|+||+++||||+++|++++.+.+..+ .+++..++.++..+|+.++....     ......
T Consensus       169 ~~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~-----~~~~~~  243 (279)
T 3t3w_A          169 WELGPRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALRQAKRAVNQTLD-----VQGFYA  243 (279)
T ss_dssp             HHHCHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH-----HTTHHH
T ss_pred             hhcCHHHHHHHHHcCCccCHHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhh-----cccHHH
Confidence            889988 99999999999999999999999999999988755555 68889999999999998876421     111245


Q ss_pred             HHHHhcCcCCHHHHHHHHhccCCC
Q 018834          262 IVDKCFGLDTVEEIIDSLESEASL  285 (350)
Q Consensus       262 ~i~~~f~~~~~~ei~~~lek~~~~  285 (350)
                      .++.+|..+.+.+..++.+...|-
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~  267 (279)
T 3t3w_A          244 AIQSVFDIHQTGHGNAMSVSGWPV  267 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSSCC
T ss_pred             HHHHHhhHHHHHHHHHHHhcCCcc
Confidence            566667666677777777666553

>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A

Probab=100.00  E-value=4.9e-48  Score=367.87  Aligned_cols=218  Identities=20%  Similarity=0.229  Sum_probs=186.4

Q ss_pred             ccCCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCC
Q 018834           29 TDDLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK  108 (350)
Q Consensus        29 ~~~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~  108 (350)
                      ..+.++.|.++++++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++........
T Consensus        30 ~~~~~~~i~~e~~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~  109 (333)
T 3njd_A           30 DFDNLKTMTYEVTDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAG  109 (333)
T ss_dssp             CTTSCSSEEEEEETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC------------
T ss_pred             CCCCCCeEEEEEECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhcccccc
Confidence            33457789999999999999999999999999999999999999999999999999999999999999999865321110


Q ss_pred             --------------------------hHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCee
Q 018834          109 --------------------------LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTV  162 (350)
Q Consensus       109 --------------------------~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~  162 (350)
                                                ......++...+.++..|.++||||||+|||+|+|||++|+++||+|||+++++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~  189 (333)
T 3njd_A          110 GGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAK  189 (333)
T ss_dssp             ---CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHHTHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCE
T ss_pred             cccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCe
Confidence                                      001234556667788889999999999999999999999999999999999999


Q ss_pred             EecccccccccCCCchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHH
Q 018834          163 FATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEA  240 (350)
Q Consensus       163 f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~  240 (350)
                      |++||+++|++|++|   +|++++|.. +++|+|||+.++|+||+++||||+|||++++.+.+..+ .+++..++.++..
T Consensus       190 f~~pe~~lG~~P~~g---~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~~~al~~  266 (333)
T 3njd_A          190 IGYPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLIM  266 (333)
T ss_dssp             EECGGGGTTCCCTTC---CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSCHHHHHH
T ss_pred             eechhhceeccCHHH---HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            999999999999987   478888988 99999999999999999999999999999988655555 6889999999999


Q ss_pred             HHHHHhccC
Q 018834          241 CLEKYSDLV  249 (350)
Q Consensus       241 ~~~~~~~~~  249 (350)
                      +|+.++...
T Consensus       267 ~K~~l~~~~  275 (333)
T 3njd_A          267 AKLACNTAL  275 (333)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998754

>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A

Probab=100.00  E-value=6e-47  Score=348.15  Aligned_cols=211  Identities=16%  Similarity=0.217  Sum_probs=189.7

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|.++++++|++||||||++.|++|.+|+.+|.++|+.++.|+++++|||||.|++||+|+|++++..    .+.+..
T Consensus        15 ~~~i~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~----~~~~~~   90 (257)
T 1szo_A           15 YENIRLERDGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNL----GTPHDW   90 (257)
T ss_dssp             CTTEEEEEETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCC----SSHHHH
T ss_pred             CceEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhc----CCHHHH
Confidence            3469999999999999999999999999999999999999999999999999999999999999998742    122333


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEec-ccccccccCCCchHHHHhhccHHH-H
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT-PETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~-Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ..++...++++..|.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|+|++|.. +
T Consensus        91 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A  169 (257)
T 1szo_A           91 DEIIFEGQRLLNNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRG  169 (257)
T ss_dssp             HHHHHHHHHHHHHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHH
Confidence            445555677888999999999999999999 5999999999999999999999 999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhcc
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDL  248 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~  248 (350)
                      ++|++||++++|+||+++||||+++|++++.+.+.. +++++..+|.++..+|+.++..
T Consensus       170 ~~llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~  228 (257)
T 1szo_A          170 RYFLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARRYARKVLTRQ  228 (257)
T ss_dssp             HHHHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSHH
T ss_pred             HHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Confidence            999999999999999999999999998887765444 4688899999999999988753

>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*

Probab=100.00  E-value=1.6e-47  Score=396.19  Aligned_cols=265  Identities=20%  Similarity=0.221  Sum_probs=213.7

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      ..++.+|+|++||||||+ +|+||.+|+.+|.+++++++.|++|++|||||.|+.||+|+|++++....  .. .     
T Consensus        23 ~~~~~~~~Va~itlnrP~-~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~--~~-~-----   93 (742)
T 3zwc_A           23 EYLRLPHSLAMIRLCNPP-VNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFT--PG-L-----   93 (742)
T ss_dssp             EEEECSTTEEEEEECCTT-TTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSC--SC-S-----
T ss_pred             eEEEeeCCEEEEEeCCCc-ccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccC--hh-H-----
Confidence            456678999999999997 79999999999999999999999999999999999999999999886431  11 1     


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA  194 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~  194 (350)
                        ....++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.. |++|+
T Consensus        94 --~~~~~~~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~  171 (742)
T 3zwc_A           94 --ALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLI  171 (742)
T ss_dssp             --HHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHH
T ss_pred             --HHHHHHHHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHH
Confidence              123567788999999999999999999999999999999999999999999999999999999999999988 99999


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCCHHH
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDTVEE  274 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~~~e  274 (350)
                      +||++++|+||+++||||+|+|++.+++..+...+++..++...+..+..    ...                 ......
T Consensus       172 ltG~~i~a~eA~~~GLv~~vv~~d~~~~A~~~A~~ia~~~~~~~~~~~~~----~~~-----------------~~~~~~  230 (742)
T 3zwc_A          172 TSGKYLSADEALRLGILDAVVKSDPVEEAIKFAQKIIDKPIEPRRIFNKP----VPS-----------------LPNMDS  230 (742)
T ss_dssp             HHCCCEEHHHHHHHTSCSEEESSCHHHHHHHHHHHHTTSCSGGGCGGGSC----CCC-----------------CTTHHH
T ss_pred             HcCCchhHHHHHHcCCccEecCchhhHHHHHHHHHHhcCCchhhhhhccc----ccc-----------------cchhhh
Confidence            99999999999999999999998877766666667776665432221110    000                 001111


Q ss_pred             HHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCcccc
Q 018834          275 IIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLF  348 (350)
Q Consensus       275 i~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~~~~  348 (350)
                      ..+..            .....+...+ +.+...+++.++++.+   .+++++|+.|.+.|.+++.+|+++.++
T Consensus       231 ~~~~~------------~~~~~k~~~~-~~A~~~~~~~v~~~~~---~~~~~gl~~E~~~F~~l~~s~~~k~~~  288 (742)
T 3zwc_A          231 VFAEA------------IAKVRKQYPG-VLAPETCVRSIQASVK---HPYEVGIKEEEKLFMYLRASGQAKALQ  288 (742)
T ss_dssp             HHHHH------------HHHHHHHSTT-CHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             hHHHH------------HHHHhhhccc-hhHHHHHHHHHHHHhh---CCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence            11110            0111112223 3466677999999999   999999999999999999999988654

>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*

Probab=100.00  E-value=1.1e-45  Score=359.90  Aligned_cols=245  Identities=18%  Similarity=0.150  Sum_probs=191.6

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcC--------C-CccccCCChhhHHHh
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--------G-RAFCAGGDIVSLYHF  103 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~--------g-~~F~aG~Dl~~~~~~  103 (350)
                      ++.|.++.+++|++||||||+++|+||.+|+.+|.++|+.++.|++|++|||||.        | ++||+|+|++++...
T Consensus       166 ~~~v~~e~~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~  245 (440)
T 2np9_A          166 MEAVHLERRDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQG  245 (440)
T ss_dssp             CSSEEEEEETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTT
T ss_pred             CceEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhcc
Confidence            4579999999999999999999999999999999999999999999999999995        6 899999999988642


Q ss_pred             hhcCChHHHHHHHHHHHHHHHHH------------hcCCCcEEEEECCcccccccccccccCEEEEeCCeeEeccccccc
Q 018834          104 MNQGKLEECKDFFRTLYSFIYLL------------GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIG  171 (350)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~l~~~i------------~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iG  171 (350)
                      ............+.....++..+            .++||||||+|||+|+|||++|+++||||||+++++|++||+++|
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~lG  325 (440)
T 2np9_A          246 GISLVDFLMRRELGYIHKLVRGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKEG  325 (440)
T ss_dssp             CCCTTTTHHHHHHTHHHHHHHCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTTC
T ss_pred             CcchhhhhhHHHHHHHHHHHHHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhccC
Confidence            11111100111112223444443            479999999999999999999999999999999999999999999


Q ss_pred             ccCCCchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccC
Q 018834          172 FHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLV  249 (350)
Q Consensus       172 l~P~~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~  249 (350)
                      ++|++| +++|+|++|.. +++|+|||+.|+|+||+++||||+|||++++.+....+ .++   ++.++..+|+.++...
T Consensus       326 l~P~~g-~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~l---a~~Av~~~K~~l~~~~  401 (440)
T 2np9_A          326 IIPGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRL---DGDAVLANRRMLNLAD  401 (440)
T ss_dssp             CCCTTH-HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTT---CSHHHHHHHHHHHHHH
T ss_pred             cCcchH-HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHh---CHHHHHHHHHHHHhhh
Confidence            999887 68999999988 99999999999999999999999999988887655444 344   3467888888877643


Q ss_pred             CCCcchH----HHHHHHHHHhc-CcCCHHHHHHHHhcc
Q 018834          250 YPDKNSV----IHRIDIVDKCF-GLDTVEEIIDSLESE  282 (350)
Q Consensus       250 ~~~~~~~----~~~~~~i~~~f-~~~~~~ei~~~lek~  282 (350)
                      . .....    ......+..+| +.+..|++.+|++|+
T Consensus       402 ~-~~~~~~~~l~~e~~~~~~~~~s~D~~Egv~AFleKR  438 (440)
T 2np9_A          402 E-SPDGFRAYMAEFALMQALRLYGHDVIDKVGRFGGRP  438 (440)
T ss_dssp             S-CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTCC---
T ss_pred             c-chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhCC
Confidence            3 21111    11233455556 556667777777876

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=100.00  E-value=1.2e-43  Score=368.35  Aligned_cols=277  Identities=17%  Similarity=0.189  Sum_probs=217.6

Q ss_pred             CcEEEE-EeCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCC-ccccCCChhhHHHhhhcCChH
Q 018834           34 NQVLVE-GKANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        34 ~~v~~~-~~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ..+.++ .+++|++||||||+ ++|+||.+|+.+|.++++.++.|+++++||||| |+ .||+|+|++++.... ....+
T Consensus         6 ~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~-~~~~~   83 (715)
T 1wdk_A            6 KAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENF-KLPDA   83 (715)
T ss_dssp             SSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHT-TSCHH
T ss_pred             CeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcc-cCCHH
Confidence            468888 78999999999998 899999999999999999999999999999999 86 999999999986531 11222


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....+....+.++.+|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.. 
T Consensus        84 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~~  163 (715)
T 1wdk_A           84 ELIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDN  163 (715)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHHH
Confidence            3344556677888999999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccC--CHHHHHHHHHHHhccCCCCcchHHHHHHHHHHh
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTD--DPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKC  266 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (350)
                      +++|++||++++|+||+++||||+++|++++.+.+..+ .+++..  +....    .....  .+.......        
T Consensus       164 A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~----~~~~~--~p~~~~~~~--------  229 (715)
T 1wdk_A          164 AVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAK----RQPKL--EKLKLNAIE--------  229 (715)
T ss_dssp             HHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHH----HGGGG--SCCSCCHHH--------
T ss_pred             HHHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchh----ccccc--CccccCchh--------
Confidence            99999999999999999999999999988887654444 445443  21110    00000  000000000        


Q ss_pred             cCcCCHHHHHHHHhccCCCCCcHHHH-HHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          267 FGLDTVEEIIDSLESEASLINDPWCG-STLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       267 f~~~~~~ei~~~lek~~~~~~~~~a~-~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                           ....++            .++ ...++...+.| +...++++++++..   .+++++++.|.+.|.+++.+|+.+
T Consensus       230 -----~~~~~~------------~~k~~~~~~~~g~~~-A~~~~k~~v~~~~~---~~~~~~l~~E~~~~~~l~~s~~~~  288 (715)
T 1wdk_A          230 -----QMMAFE------------TAKGFVAGQAGPNYP-APVEAIKTIQKAAN---FGRDKALEVEAAGFAKLAKTSASN  288 (715)
T ss_dssp             -----HHHHHH------------HHHHHHHHHHCTTCH-HHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHTSHHHH
T ss_pred             -----HHHHHH------------HHHHHHHHhcccCCc-hHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcchhHH
Confidence                 000011            011 12334455566 55666999999998   899999999999999999999876


Q ss_pred             cc
Q 018834          346 LL  347 (350)
Q Consensus       346 ~~  347 (350)
                      .+
T Consensus       289 ~~  290 (715)
T 1wdk_A          289 CL  290 (715)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=100.00  E-value=5e-44  Score=371.33  Aligned_cols=273  Identities=19%  Similarity=0.229  Sum_probs=212.1

Q ss_pred             CcEEEE-EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCC-ccccCCChhhHHHhhhcCChHH
Q 018834           34 NQVLVE-GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGR-AFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        34 ~~v~~~-~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~-~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +.+.++ .+++|++|||||| ++|+||.+|+.+|.++++.++.|++|++||||| |+ +||+|+|++++...... ....
T Consensus         7 ~~i~~~~~~~~va~itlnrp-~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~-~~~~   83 (725)
T 2wtb_A            7 GKTVMEVGGDGVAVITLINP-PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKG-NVKE   83 (725)
T ss_dssp             CEEEEEECTTSEEEEEEECT-TTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC-------------C
T ss_pred             CeEEEEEeeCCEEEEEECCC-CCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccch-hhhh
Confidence            358888 7899999999999 799999999999999999999999999999999 85 99999999987532100 0000


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...+....+.++.+|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus        84 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~~A  163 (725)
T 2wtb_A           84 PKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKA  163 (725)
T ss_dssp             CSSSHHHHHCCCCCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHHHH
Confidence            011234456677789999999999999999999999999999999999999999999999999999999999999987 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccC--CHH-HHHHHHHHHhccCCCCcchHHHHHHHHHHh
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTD--DPS-VIEACLEKYSDLVYPDKNSVIHRIDIVDKC  266 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~--~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~  266 (350)
                      ++|++||++++|+||+++||||+++|++++.+.+..+ .+++..  ++. ++.     +..  ..               
T Consensus       164 ~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~-----~~~--~~---------------  221 (725)
T 2wtb_A          164 LEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVS-----KTD--KL---------------  221 (725)
T ss_dssp             HHHHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHTTSSCCCCGGG-----CCT--TS---------------
T ss_pred             HHHHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHHHHHHhcCCChhhhhh-----hcc--cc---------------
Confidence            9999999999999999999999999998887654443 333332  110 000     000  00               


Q ss_pred             cCcCCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCcc
Q 018834          267 FGLDTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSL  346 (350)
Q Consensus       267 f~~~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~~  346 (350)
                         +......+.+         +|++..+.+..+++|... .++++++++..   .+++++++.|.+.|..++.+|+.+.
T Consensus       222 ---~~~~~~~~~~---------~~a~~~~~~~~~g~pA~~-~~k~~~~~~~~---~~~~~~l~~E~~~~~~l~~s~~~~~  285 (725)
T 2wtb_A          222 ---PPLGEAREIL---------TFAKAQTLKRAPNMKHPL-MCLDAIEVGIV---SGPRAGLEKEAEVASQVVKLDTTKG  285 (725)
T ss_dssp             ---CCHHHHHHHH---------HHHHHHHHHHCTTCCHHH-HHHHHHHHHHH---SCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred             ---CccchHHHHH---------HHHHHHHHHhccCCcHHH-HHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcchhHHH
Confidence               0011111111         356677777777888654 47999999988   8999999999999999999988654


Q ss_pred             c
Q 018834          347 L  347 (350)
Q Consensus       347 ~  347 (350)
                      +
T Consensus       286 ~  286 (725)
T 2wtb_A          286 L  286 (725)
T ss_dssp             H
T ss_pred             H
Confidence            3

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=100.00  E-value=7.5e-43  Score=343.11  Aligned_cols=208  Identities=14%  Similarity=0.150  Sum_probs=183.3

Q ss_pred             cccCCCCcEEEEEeCCEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHHcC-CCceEEEEEc-CCCccccCC
Q 018834           28 VTDDLCNQVLVEGKANSRMAILNRPS----------ALNALNTNMGAKLNKLFKAWEND-PNIGFVSMKG-SGRAFCAGG   95 (350)
Q Consensus        28 ~~~~~~~~v~~~~~~~v~~ItLnrp~----------~~Nal~~~m~~~L~~~l~~~~~d-~~v~~vvl~g-~g~~F~aG~   95 (350)
                      +.+..+.++.++.+++|++||||||+          ++|+||.+|+.+|.++|+.++.| ++|++|||+| .|++||+|+
T Consensus        15 t~p~~~~~v~ve~~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGa   94 (556)
T 2w3p_A           15 TDPSQYKHWKLSFNGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGA   94 (556)
T ss_dssp             CCGGGCSSEEEEEETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEE
T ss_pred             CCCCcCceEEEEeeCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCc
Confidence            33445678999999999999999998          89999999999999999999999 9999999999 889999999


Q ss_pred             ChhhHHHhhhcCChHHHHHHHHHHHHHHHHH----hcCCCcEEEEECCcccccccccccccCEEEEeCC--eeEeccccc
Q 018834           96 DIVSLYHFMNQGKLEECKDFFRTLYSFIYLL----GTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK--TVFATPETL  169 (350)
Q Consensus        96 Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i----~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~--a~f~~Pe~~  169 (350)
                      |++++...    .......+.+..+.++..|    .++||||||+|||+|+|||++|+++||+|||+++  ++|++||++
T Consensus        95 DL~el~~~----~~~~~~~~~~~~~~l~~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~  170 (556)
T 2w3p_A           95 NIFMLGLS----THAWKVNFCKFTNETRNGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVP  170 (556)
T ss_dssp             CHHHHHHS----CHHHHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHH
T ss_pred             CHHHHhhc----ccHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEeccccc
Confidence            99998643    1122334455567778888    9999999999999999999999999999999999  999999999


Q ss_pred             -ccccCCCchHHHHh--hccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHH
Q 018834          170 -IGFHPDAGASFYLS--HLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIE  239 (350)
Q Consensus       170 -iGl~P~~G~s~~L~--rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~  239 (350)
                       +|++|++|++++|+  |++|.. +++|++||+.++|+||+++||||+|+|++++.+.+..+ .+++..++.++.
T Consensus       171 ~LGL~Pg~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~Av~  245 (556)
T 2w3p_A          171 LLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAH  245 (556)
T ss_dssp             HHSSCCTTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTCCCCTT
T ss_pred             ccCCCCCccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCChHHHh
Confidence             99999999999999  999987 99999999999999999999999999988877654444 567777776654

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=99.84  E-value=5.6e-22  Score=201.68  Aligned_cols=163  Identities=17%  Similarity=0.167  Sum_probs=133.8

Q ss_pred             EeCCEEEEEEcCCCCCCC--CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHH
Q 018834           40 GKANSRMAILNRPSALNA--LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFR  117 (350)
Q Consensus        40 ~~~~v~~ItLnrp~~~Na--l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~  117 (350)
                      .+++|++|+||+|...|+  ++..+..+|.++|+.++.|+++++|||++++    .|+|+...                .
T Consensus       299 ~~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~----------------~  358 (593)
T 3bf0_A          299 TGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTAS----------------E  358 (593)
T ss_dssp             CSCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHH----------------H
T ss_pred             CCCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHH----------------H
Confidence            357899999999998898  6889999999999999999999999999974    58887642                1


Q ss_pred             HHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccc------------cccccCCC---------
Q 018834          118 TLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET------------LIGFHPDA---------  176 (350)
Q Consensus       118 ~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~------------~iGl~P~~---------  176 (350)
                      .+++.+.++..++|||||+|+|.|.|||+.|+++||+|||++++.|+.+++            ++|+.|+.         
T Consensus       359 ~i~~~i~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~  438 (593)
T 3bf0_A          359 VIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADV  438 (593)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCC
T ss_pred             HHHHHHHHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeeccccccc
Confidence            233455667788999999999999999999999999999999999999885            68987653         


Q ss_pred             ----chH---------------HHHhhccHHH------HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          177 ----GAS---------------FYLSHLPGHL------GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       177 ----G~s---------------~~L~rl~g~~------a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                          +.+               ..+.+.++..      +.+++++|+.++|+||+++||||++++.+++.+
T Consensus       439 ~~~~~~t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~  509 (593)
T 3bf0_A          439 SITRALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVA  509 (593)
T ss_dssp             CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHH
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHH
Confidence                222               3344444421      578899999999999999999999997555443

>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}

Probab=99.81  E-value=9.3e-20  Score=165.37  Aligned_cols=160  Identities=12%  Similarity=0.059  Sum_probs=120.9

Q ss_pred             eCCEEEEEEcCCCCCCCCCHH-------HHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHH
Q 018834           41 KANSRMAILNRPSALNALNTN-------MGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECK  113 (350)
Q Consensus        41 ~~~v~~ItLnrp~~~Nal~~~-------m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~  113 (350)
                      +++|++|+++.+=.-+.-...       ...+|.++|+.++.|++||+|||+++    |.|+|+....            
T Consensus         2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~------------   65 (240)
T 3rst_A            2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESA------------   65 (240)
T ss_dssp             CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHH------------
T ss_pred             CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHH------------
Confidence            367888888866432211111       35789999999999999999999986    6899986532            


Q ss_pred             HHHHHHHHHHHHHhc-CCCcEEEEECCcccccccccccccCEEEEeCCeeEecc---------------------ccccc
Q 018834          114 DFFRTLYSFIYLLGT-HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATP---------------------ETLIG  171 (350)
Q Consensus       114 ~~~~~~~~l~~~i~~-~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~P---------------------e~~iG  171 (350)
                          ..++.+..+.. ++|||||+++|.|.|||+.|+++||+||+++++.|+.+                     +.+.|
T Consensus        66 ----~i~~~l~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G  141 (240)
T 3rst_A           66 ----EIHKKLEEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSG  141 (240)
T ss_dssp             ----HHHHHHHHHHHHHCCCEEEEEEEEEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESS
T ss_pred             ----HHHHHHHHHHHhCCCeEEEEECCeehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEecc
Confidence                22344555666 89999999999999999999999999999999999999                     66788


Q ss_pred             ccCCCchHH--------------------------HHhhccHHHHHHHhhcCCCCCHHHHHHCCCCccccCCCCh
Q 018834          172 FHPDAGASF--------------------------YLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSEKL  220 (350)
Q Consensus       172 l~P~~G~s~--------------------------~L~rl~g~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l  220 (350)
                      -+++.+..+                          ...|-+.......+++|+.++|++|+++||||++.+.+++
T Consensus       142 ~~k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~~~~g~~~~a~~A~~~GLVD~i~~~~~~  216 (240)
T 3rst_A          142 AHADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKKIADGRVYDGRQAKKLNLVDELGFYDDT  216 (240)
T ss_dssp             TTTTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHCSSCEEEHHHHHHTTSSSEECCHHHH
T ss_pred             ccccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHhcCCcccHHHHHHcCCCcccCCHHHH
Confidence            888876432                          1122223333344789999999999999999999874443

>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A

Probab=99.79  E-value=7.1e-19  Score=157.78  Aligned_cols=155  Identities=12%  Similarity=0.190  Sum_probs=126.3

Q ss_pred             eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834           41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY  120 (350)
Q Consensus        41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      .+.|.+|+++     |+++..+...|.+.|+.++.+ ++++|+|+.+    |.|+|+....                   
T Consensus         7 ~~~V~vI~i~-----g~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in----spGG~v~~~~-------------------   57 (230)
T 3viv_A            7 KNIVYVAQIK-----GQITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAMM-------------------   57 (230)
T ss_dssp             CCEEEEEEEE-----SCBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE----BSCEEHHHHH-------------------
T ss_pred             CCeEEEEEEe-----CEECHHHHHHHHHHHHHHhcC-CCCEEEEEEe----CCCcCHHHHH-------------------
Confidence            3579999998     579999999999999999864 6999999875    8888875431                   


Q ss_pred             HHHHHHhcCCCcEEEEE---CCcccccccccccccCEEEEeCCeeEecccccccccCCCchH---------------HHH
Q 018834          121 SFIYLLGTHLKPHVAIL---NGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGAS---------------FYL  182 (350)
Q Consensus       121 ~l~~~i~~~~kP~Ia~i---~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s---------------~~L  182 (350)
                      .+...|..++||||+++   +|.|.|+|+.|+++||+|++.++++|+.+++..++ |+.|.+               ..+
T Consensus        58 ~i~~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~l  136 (230)
T 3viv_A           58 NIVQRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSL  136 (230)
T ss_dssp             HHHHHHHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHH
Confidence            23445668999999999   99999999999999999999999999999997643 555542               136


Q ss_pred             hhccHH---HHHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH
Q 018834          183 SHLPGH---LGEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL  227 (350)
Q Consensus       183 ~rl~g~---~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l  227 (350)
                      ++..|.   .+..++.++..++|+||+++||||+++++  .+++.+++
T Consensus       137 a~~~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~--~~~ll~~~  182 (230)
T 3viv_A          137 AQESGRNATIAEEFITKDLSLTPEEALKYGVIEVVARD--INELLKKS  182 (230)
T ss_dssp             HHHTTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSS--HHHHHHHH
T ss_pred             HHHhCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCC--HHHHHHHh
Confidence            666673   38899999999999999999999999975  34444444

>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1

Probab=99.58  E-value=6.9e-15  Score=131.18  Aligned_cols=138  Identities=11%  Similarity=0.103  Sum_probs=106.3

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL  137 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i  137 (350)
                      ++..+.+.|.+.|..++.|+.++.|+|.    ..|.|+++..-.                   .+...|..+++||++++
T Consensus        54 I~~~~a~~i~~~L~~l~~~~~~k~I~l~----InSPGG~v~ag~-------------------~I~~~i~~~~~pV~t~v  110 (218)
T 1y7o_A           54 VEDNMANSVIAQLLFLDAQDSTKDIYLY----VNTPGGSVSAGL-------------------AIVDTMNFIKADVQTIV  110 (218)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCTTSCEEEE----EEECCBCHHHHH-------------------HHHHHHHHSSSCEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHhcCCCCCEEEE----EECcCCCHHHHH-------------------HHHHHHHhcCCCEEEEE
Confidence            8899999999999999988888887775    366777664311                   12334566799999999


Q ss_pred             CCcccccccccccccCE--EEEeCCeeEecccccccccCCCchH------------------HHHhhccHH---HHHHHh
Q 018834          138 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGAS------------------FYLSHLPGH---LGEFLA  194 (350)
Q Consensus       138 ~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s------------------~~L~rl~g~---~a~~l~  194 (350)
                      +|.|.++|+.|+++||.  |++.++++|++++.. |.+|+.|..                  ..+++..|.   ....++
T Consensus       111 ~G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~  189 (218)
T 1y7o_A          111 MGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADA  189 (218)
T ss_dssp             EEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred             ccEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence            99999999999999999  999999999999987 444433432                  445555554   367778


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEK  219 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~  219 (350)
                      .+|..++|+||+++||||+++++++
T Consensus       190 ~~~~~~ta~EA~e~GLVD~v~~~~~  214 (218)
T 1y7o_A          190 ERDNWMSAQETLEYGFIDEIMANNS  214 (218)
T ss_dssp             HSCCCBCHHHHHHHTSCSEECCCC-
T ss_pred             hCCCEEcHHHHHHCCCCcEEcCcCC
Confidence            8999999999999999999998765

>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=99.54  E-value=1.4e-14  Score=135.16  Aligned_cols=150  Identities=15%  Similarity=0.151  Sum_probs=116.3

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834           44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI  123 (350)
Q Consensus        44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (350)
                      |.++..+..-..|+++..+.+++.++++.+.++ .+.+|+|+++|     |+|+.+...        ..    ....++.
T Consensus       120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~--------~l----~~~~~i~  181 (304)
T 2f9y_B          120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALM--------SL----MQMAKTS  181 (304)
T ss_dssp             CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHH--------HH----HHHHHHH
T ss_pred             EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHH--------HH----HHHHHHH
Confidence            455556655578999999999999999999998 89999999876     888855321        11    2223344


Q ss_pred             HHH---hcCCCcEEEEECCcccccc-cccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCC
Q 018834          124 YLL---GTHLKPHVAILNGVTMGGG-AGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAK  199 (350)
Q Consensus       124 ~~i---~~~~kP~Ia~i~G~~~GgG-~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~  199 (350)
                      ..+   ...++|+|++++|.|.||| +.++++||++|+.++++|++.           +...+++.+|..     ++++.
T Consensus       182 ~al~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~-----l~~~~  245 (304)
T 2f9y_B          182 AALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK-----LPPGF  245 (304)
T ss_dssp             HHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC-----CCTTT
T ss_pred             HHHHHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc-----CCccc
Confidence            444   4459999999999999999 778999999999999999886           455566665532     67899


Q ss_pred             CCHHHHHHCCCCccccCCCChHHHHHHH
Q 018834          200 LNGAEMMACGLATHYSVSEKLPLIEEEL  227 (350)
Q Consensus       200 l~a~eA~~~GLv~~vv~~~~l~~~~~~l  227 (350)
                      .+|+++.++|+||.|++++++.+....+
T Consensus       246 ~~Ae~~~~~Glvd~Vv~~~el~~~l~~l  273 (304)
T 2f9y_B          246 QRSEFLIEKGAIDMIVRRPEMRLKLASI  273 (304)
T ss_dssp             TBHHHHGGGTCCSEECCHHHHHHHHHHH
T ss_pred             CCHHHHHhcCCccEEeCcHHHHHHHHHH
Confidence            9999999999999999886655443333

>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=99.50  E-value=2.7e-13  Score=127.59  Aligned_cols=153  Identities=12%  Similarity=0.062  Sum_probs=108.6

Q ss_pred             EeCCEEEEEEcCCC---------CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           40 GKANSRMAILNRPS---------ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        40 ~~~~v~~ItLnrp~---------~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ..|....|.-|+|.         ..++++.+..+.+.+.++.++... +-+|.|.-+++++. |.+    .+.       
T Consensus       114 i~G~~V~Via~d~~~~~~~~~~~~~G~~~~~~~~Ka~r~~~~A~~~~-~PlI~lvdt~Ga~~-g~~----ae~-------  180 (327)
T 2f9i_A          114 LNGRAVTVIGQQRGKDTKDNIYRNFGMAHPEGYRKALRLMKQAEKFN-RPIFTFIDTKGAYP-GKA----AEE-------  180 (327)
T ss_dssp             ETTEEEEEEEECCCSSHHHHHHTGGGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-CHH----HHH-------
T ss_pred             ECCEEEEEEEEcCCCchhhhhhhhcCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCCc-chh----hhh-------
Confidence            34555556666665         347899999999999999988764 45555543322221 211    110       


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                        ........+++..+.++++|+|++|+|.|.|||+.+.++||++||+++++|++      +.|.++++.++.+..+.. 
T Consensus       181 --~g~~~~~a~~l~al~~~~vPvIavV~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~  252 (327)
T 2f9i_A          181 --RGQSESIATNLIEMASLKVPVIAIVIGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKI  252 (327)
T ss_dssp             --TTHHHHHHHHHHHHHTCSSCEEEEEEEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHH
T ss_pred             --hhhHHHHHHHHHHHHhCCCCEEEEEECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHH
Confidence              01223345567778999999999999999999999999999999999998885      345555555544444433 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCC
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      +.++    ..++|++|+++|+||+|++.
T Consensus       253 A~e~----~~itA~~a~~~GlVd~VV~e  276 (327)
T 2f9i_A          253 AAET----MKITAHDIKQLGIIDDVISE  276 (327)
T ss_dssp             HHHH----HTCBHHHHHHTTSSSEEECC
T ss_pred             HHHH----cCCCHHHHHHcCCceEEecC
Confidence            5555    77999999999999999984

>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4

Probab=99.47  E-value=5e-13  Score=126.15  Aligned_cols=138  Identities=11%  Similarity=-0.036  Sum_probs=105.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      .++++.+..+.+.+.++.++... +-+|.|.-++++     .+..-.+.         ........+++..+.++++|+|
T Consensus       152 ~G~~~~~~~~Ka~r~~~~A~~~~-lPlI~lvDt~Ga-----~~g~~aE~---------~g~~~~~a~~l~al~~~~vPvI  216 (339)
T 2f9y_A          152 FGMPAPEGYRKALRLMQMAERFK-MPIITFIDTPGA-----YPGVGAEE---------RGQSEAIARNLREMSRLGVPVV  216 (339)
T ss_dssp             GGCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCS-----CCSHHHHH---------TTHHHHHHHHHHHHHTCSSCEE
T ss_pred             cCCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCC-----ccchHHHH---------HHHHHHHHHHHHHHHhCCCCEE
Confidence            47899999999999999988764 555555443322     22111110         0123344556777899999999


Q ss_pred             EEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCcc
Q 018834          135 AILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATH  213 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~  213 (350)
                      ++|+|.|.|||+.+.+.||++||+++++|++      +.|.++++.++.+..+.. +.++    ..++|++|+++|+||+
T Consensus       217 avV~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~  286 (339)
T 2f9y_A          217 CTVIGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDS  286 (339)
T ss_dssp             EEEEEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSC
T ss_pred             EEEeCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeE
Confidence            9999999999999999999999999999996      467777777777766644 6665    6799999999999999


Q ss_pred             ccCC
Q 018834          214 YSVS  217 (350)
Q Consensus       214 vv~~  217 (350)
                      |++.
T Consensus       287 VV~e  290 (339)
T 2f9y_A          287 IIPE  290 (339)
T ss_dssp             CCCC
T ss_pred             EecC
Confidence            9984

>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A

Probab=98.88  E-value=5.3e-09  Score=92.34  Aligned_cols=145  Identities=15%  Similarity=0.097  Sum_probs=98.8

Q ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHH
Q 018834           46 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL  125 (350)
Q Consensus        46 ~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~  125 (350)
                      +|.++-     .++..+.+.+.+.|..++.|+.++.|+|.    .=|.||++..-                   ..+...
T Consensus        29 ii~l~G-----~I~~~~a~~i~~~L~~~~~~~~~k~I~l~----InSPGG~v~a~-------------------~~I~~~   80 (208)
T 2cby_A           29 IIFLGS-----EVNDEIANRLCAQILLLAAEDASKDISLY----INSPGGSISAG-------------------MAIYDT   80 (208)
T ss_dssp             EEEECS-----CBCHHHHHHHHHHHHHHHHHCSSSCEEEE----EEECCBCHHHH-------------------HHHHHH
T ss_pred             EEEEcC-----EECHHHHHHHHHHHHHHHhCCCCCCEEEE----EECCCCCHHHH-------------------HHHHHH
Confidence            355653     36789999999999999887777766663    24556655321                   112334


Q ss_pred             HhcCCCcEEEEECCcccccccccccccCE--EEEeCCeeEecccccccccC---CCchH------------HHHhhccHH
Q 018834          126 LGTHLKPHVAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHP---DAGAS------------FYLSHLPGH  188 (350)
Q Consensus       126 i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P---~~G~s------------~~L~rl~g~  188 (350)
                      |..+++||++.+.|.|.++|..++++||.  |++.+++.+++....-|...   +....            ..+.+..|.
T Consensus        81 i~~~~~pV~~~v~g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~  160 (208)
T 2cby_A           81 MVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQ  160 (208)
T ss_dssp             HHHCSSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHhcCCCEEEEECcEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            56678999999999999999999999998  99999999988765432210   00000            011111121


Q ss_pred             --H-HHHHhhcCCCCCHHHHHHCCCCccccCCC
Q 018834          189 --L-GEFLALTGAKLNGAEMMACGLATHYSVSE  218 (350)
Q Consensus       189 --~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~  218 (350)
                        . ...++-.|..++|+||+++||||++.+..
T Consensus       161 ~~~~i~~~~~~~~~~ta~eA~e~GLvD~i~~~~  193 (208)
T 2cby_A          161 PIERIEADSDRDRWFTAAEALEYGFVDHIITRA  193 (208)
T ss_dssp             CHHHHHHHHHTTCEEEHHHHHHHTSCSEECSCC
T ss_pred             CHHHHHHHHhCCcEEcHHHHHHcCCCcEecCch
Confidence              1 34466789999999999999999998653

>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A

Probab=98.49  E-value=1.1e-06  Score=76.96  Aligned_cols=140  Identities=14%  Similarity=0.063  Sum_probs=94.4

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEE
Q 018834           57 ALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAI  136 (350)
Q Consensus        57 al~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~  136 (350)
                      .++..+.+.+.+.|..++.++..+.|+|.=    =|.||++..-.                   .+...|...++||++.
T Consensus        35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~I----nSPGG~v~~~~-------------------~I~~~i~~~~~~V~t~   91 (203)
T 3qwd_A           35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYI----NSPGGSVTAGF-------------------AIYDTIQHIKPDVQTI   91 (203)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHCSSSCEEEEE----EECCBCHHHHH-------------------HHHHHHHHSSSCEEEE
T ss_pred             EECHHHHHHHHHHHHHHHhcCCCCCEEEEE----eCCCCCHHHHH-------------------HHHHHHHHhcCCcEEE
Confidence            388999999999999998876666555532    24555543211                   1223355678999999


Q ss_pred             ECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchH----HHHhhc-----------cHH--H-HHHHhhc
Q 018834          137 LNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGAS----FYLSHL-----------PGH--L-GEFLALT  196 (350)
Q Consensus       137 i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s----~~L~rl-----------~g~--~-a~~l~lt  196 (350)
                      +.|.|.++|.-|+++||  .|++.+++.|.+....-|..-..--.    ..+.++           .|.  . ...++-.
T Consensus        92 ~~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~~  171 (203)
T 3qwd_A           92 CIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDR  171 (203)
T ss_dssp             EEEEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSSTTTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHTS
T ss_pred             EeeeehhHHHHHHHcCCcCeEEEcCCceEEEecccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhc
Confidence            99999999999999999  69999999998865543321111000    111111           111  1 2334445


Q ss_pred             CCCCCHHHHHHCCCCccccCCCC
Q 018834          197 GAKLNGAEMMACGLATHYSVSEK  219 (350)
Q Consensus       197 G~~l~a~eA~~~GLv~~vv~~~~  219 (350)
                      ...++|+||+++||||+|+.+..
T Consensus       172 d~~lta~EA~e~GliD~I~~~~~  194 (203)
T 3qwd_A          172 DNFLTAEEAKEYGLIDEVMVPET  194 (203)
T ss_dssp             CCCEEHHHHHHHTSCSEECCCCC
T ss_pred             CceecHHHHHHcCCcCEecCCcc
Confidence            66789999999999999997653

>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A

Probab=98.43  E-value=2.8e-07  Score=80.30  Aligned_cols=134  Identities=16%  Similarity=0.061  Sum_probs=91.3

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL  137 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i  137 (350)
                      ++..+.+.+.+.|..++.++.++.|+|.=    =|.||++..-.                   .+...|..+++||++.+
T Consensus        35 I~~~~a~~i~~~L~~l~~~~~~~~I~l~I----nSPGG~v~a~~-------------------~I~~~i~~~~~pV~~~v   91 (193)
T 1yg6_A           35 VEDHMANLIVAQMLFLEAENPEKDIYLYI----NSPGGVITAGM-------------------SIYDTMQFIKPDVSTIC   91 (193)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEE----EECCBCHHHHH-------------------HHHHHHHHSSSCEEEEE
T ss_pred             EcHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECcCCCHHHHH-------------------HHHHHHHhcCCCEEEEE
Confidence            78889999999999988777677766642    35566553211                   12333556789999999


Q ss_pred             CCcccccccccccccCE--EEEeCCeeEecccccccccCCCchH-H------HH-----------hhccHH--H-HHHHh
Q 018834          138 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGAS-F------YL-----------SHLPGH--L-GEFLA  194 (350)
Q Consensus       138 ~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s-~------~L-----------~rl~g~--~-a~~l~  194 (350)
                      .|.|..+|.-++++||.  |++.+++.+.+.....|.   .|-. -      .+           .+..|.  . ...++
T Consensus        92 ~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~~  168 (193)
T 1yg6_A           92 MGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY---QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDT  168 (193)
T ss_dssp             EEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHT
T ss_pred             eeeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Confidence            99999999999999999  999999998776544332   1110 0      01           111111  1 12233


Q ss_pred             hcCCCCCHHHHHHCCCCccccCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      -.+..++|+||+++||||+++.+
T Consensus       169 ~~~~~~ta~eA~~~GliD~i~~~  191 (193)
T 1yg6_A          169 ERDRFLSAPEAVEYGLVDSILTH  191 (193)
T ss_dssp             SSCEEEEHHHHHHHTSSSEECCC
T ss_pred             cCCeEEcHHHHHHcCCCCEecCC
Confidence            33456799999999999999865

>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1

Probab=98.40  E-value=1.3e-06  Score=77.18  Aligned_cols=144  Identities=13%  Similarity=0.032  Sum_probs=91.9

Q ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHH
Q 018834           46 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL  125 (350)
Q Consensus        46 ~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~  125 (350)
                      +|.|+-     .++..+...+.+.|..++.++. +.|+|.=    =|.||++..-.                   .+...
T Consensus        41 iI~l~G-----~I~~~~a~~i~~~L~~l~~~~~-k~I~l~I----NSPGGsv~a~~-------------------~I~~~   91 (215)
T 2f6i_A           41 IIYLTD-----EINKKTADELISQLLYLDNINH-NDIKIYI----NSPGGSINEGL-------------------AILDI   91 (215)
T ss_dssp             EEEECS-----CBCHHHHHHHHHHHHHHHHHCC-SCEEEEE----EECCBCHHHHH-------------------HHHHH
T ss_pred             EEEEcc-----EECHHHHHHHHHHHHHHHhCCC-CcEEEEE----ECCCCCHHHHH-------------------HHHHH
Confidence            455654     3678889999999998876555 6655532    24455543211                   12333


Q ss_pred             HhcCCCcEEEEECCcccccccccccccCE--EEEeCCeeEeccccccccc---CCCchH-HHHhhcc-----------H-
Q 018834          126 LGTHLKPHVAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFH---PDAGAS-FYLSHLP-----------G-  187 (350)
Q Consensus       126 i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~---P~~G~s-~~L~rl~-----------g-  187 (350)
                      |...++||++.+.|.|..+|.-++++||.  |++.+++.+.+.....|..   .+.... ..+.++-           | 
T Consensus        92 i~~~~~pV~t~v~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~  171 (215)
T 2f6i_A           92 FNYIKSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQ  171 (215)
T ss_dssp             HHHSSSCEEEEEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHhcCCCEEEEEeeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            55678999999999999999999999999  9999999988766543321   111100 0111110           1 


Q ss_pred             --HHHHHHhhcCCCCCHHHHHHCCCCccccCCC
Q 018834          188 --HLGEFLALTGAKLNGAEMMACGLATHYSVSE  218 (350)
Q Consensus       188 --~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~  218 (350)
                        .....++-.+..++|+||+++||||++.++.
T Consensus       172 ~~e~i~~~~~~~~~lta~eA~e~GLiD~I~~~~  204 (215)
T 2f6i_A          172 TVETIEKDSDRDYYMNALEAKQYGIIDEVIETK  204 (215)
T ss_dssp             CHHHHHHHHHTTCEECHHHHHHHTSCSEECCCS
T ss_pred             CHHHHHHHHhCCeecCHHHHHHCCCCCEecCCc
Confidence              0112222223456999999999999998754

>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}

Probab=98.35  E-value=0.00012  Score=72.46  Aligned_cols=204  Identities=11%  Similarity=0.090  Sum_probs=143.9

Q ss_pred             EEEEeCCEEEEEEcCCCCCC-------------CCCHHHHHHHHHHHHHHHc-CCCceEEEEEcCCCccccCCChhhHHH
Q 018834           37 LVEGKANSRMAILNRPSALN-------------ALNTNMGAKLNKLFKAWEN-DPNIGFVSMKGSGRAFCAGGDIVSLYH  102 (350)
Q Consensus        37 ~~~~~~~v~~ItLnrp~~~N-------------al~~~m~~~L~~~l~~~~~-d~~v~~vvl~g~g~~F~aG~Dl~~~~~  102 (350)
                      .+++..+++.++...|..-.             .....|.+||.+++..+.. ..+|...++...|       |...+..
T Consensus       271 ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~~~~~l~~~~el~~All~l~~ne~~~~~~~~~t~g-------~~~~~~~  343 (556)
T 2w3p_A          271 TIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEG-------DARHLLA  343 (556)
T ss_dssp             EEETTTTEEEEEEECCSSCCCCSHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEES-------CHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCchhhHHHHHHhhhcchhhhhhhHHHHHHHhhhhccHHHhHhhhhccC-------CHHHHhh
Confidence            34555678888888776422             2234588999888877765 4678888888774       4333321


Q ss_pred             h---h-hcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEEC-Cccccccc-ccccccCEEEEeC-------CeeEeccccc
Q 018834          103 F---M-NQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILN-GVTMGGGA-GVSIPGTFRVACG-------KTVFATPETL  169 (350)
Q Consensus       103 ~---~-~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~-G~~~GgG~-~Lal~~D~riate-------~a~f~~Pe~~  169 (350)
                      .   . ...+.-...+....+.+...+|.-...-++|.|+ |.|+.|-+ +|+++||..++-+       ...+.+.+.+
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~d~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  423 (556)
T 2w3p_A          344 ADASLMQHKDHWFVRETIGLLRRTLARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPAITLSEVN  423 (556)
T ss_dssp             HHHHHHHTTTSHHHHHHHHHHHHHHHHHHTCSSEEEEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCCEECCGGG
T ss_pred             hHHHHHhccchHHHHHHHHHHHHHHHHhcccchhheeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCceeEeeccc
Confidence            1   1 1222233344444455677788888899999997 99988864 8999999999853       3689999999


Q ss_pred             ccccCCCchHHHHhhcc-H---HHHHHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHhccCCHHHHHHHHHH
Q 018834          170 IGFHPDAGASFYLSHLP-G---HLGEFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKLVTDDPSVIEACLEK  244 (350)
Q Consensus       170 iGl~P~~G~s~~L~rl~-g---~~a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l~~~~~~~i~~~~~~  244 (350)
                      +|.+|.+-+--+|.+.. |   ....--.-.|+++++++|.++|||+...++-++++ +.-.+++-++-+|+++...-..
T Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  503 (556)
T 2w3p_A          424 FGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDALTGLEAN  503 (556)
T ss_dssp             GTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred             cCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCeecCcccCChHHHHHHHHHHHhccCcchhccchhh
Confidence            99999887766666542 2   22223356799999999999999999887777764 4556678888899988766555


Q ss_pred             Hhc
Q 018834          245 YSD  247 (350)
Q Consensus       245 ~~~  247 (350)
                      ++-
T Consensus       504 ~~~  506 (556)
T 2w3p_A          504 LRF  506 (556)
T ss_dssp             HSS
T ss_pred             ccc
Confidence            543

>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1

Probab=98.26  E-value=2.6e-06  Score=77.87  Aligned_cols=143  Identities=14%  Similarity=0.081  Sum_probs=94.9

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      .+|.|+-+     ++.++.+.+...|..++.++..+.|+|.=    =|-||++..-.                .   +..
T Consensus        83 rII~l~G~-----I~d~~a~~iiaqL~~l~~ed~~k~I~L~I----NSPGGsV~ag~----------------a---Iyd  134 (277)
T 1tg6_A           83 RIVCVMGP-----IDDSVASLVIAQLLFLQSESNKKPIHMYI----NSPGGVVTAGL----------------A---IYD  134 (277)
T ss_dssp             TEEEEESS-----BCHHHHHHHHHHHHHHHHHCSSSCEEEEE----EECCBCHHHHH----------------H---HHH
T ss_pred             cEEEEcCE-----ECHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECCCCCHHHHH----------------H---HHH
Confidence            35666544     78889999999999887655567666632    24555543211                1   222


Q ss_pred             HHhcCCCcEEEEECCcccccccccccccCE--EEEeCCeeEecccccccccCCCch-HH------HHhhc----------
Q 018834          125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGA-SF------YLSHL----------  185 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~-s~------~L~rl----------  185 (350)
                      .|...++||++.+.|.|..+|.-|+++||.  |++.+++.+.+-....|.   .|- +-      .+-++          
T Consensus       135 ~I~~~k~pV~t~v~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~---~G~a~Di~~~a~ei~~~~~~~~~i~a~  211 (277)
T 1tg6_A          135 TMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGA---RGQATDIAIQAEEIMKLKKQLYNIYAK  211 (277)
T ss_dssp             HHHHSCSCEEEEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCC---CSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCEEEEEccEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccc---cCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            345678999999999999999999999998  999999988776543332   111 11      01110          


Q ss_pred             -cH--HH-HHHHhhcCCCCCHHHHHHCCCCccccCCC
Q 018834          186 -PG--HL-GEFLALTGAKLNGAEMMACGLATHYSVSE  218 (350)
Q Consensus       186 -~g--~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~  218 (350)
                       .|  .. ...++-.+..++|+||+++||||+++...
T Consensus       212 ~tG~~~e~i~~~~drd~~lta~EAle~GLID~I~~~~  248 (277)
T 1tg6_A          212 HTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHP  248 (277)
T ss_dssp             HHCCCHHHHHHHHSSCEEECHHHHHHHTSCSEECSSC
T ss_pred             HhCCCHHHHHHHHhcCcccCHHHHHHCCCCCEecCcc
Confidence             01  01 22333345667999999999999999764

>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1

Probab=98.23  E-value=1.2e-06  Score=76.61  Aligned_cols=135  Identities=15%  Similarity=0.044  Sum_probs=91.2

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAIL  137 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i  137 (350)
                      ++..+.+.+...|..++.++..+.|+|.=    =|.||++..-.                   .+...|...++|+++.+
T Consensus        39 I~~~~a~~i~~~L~~l~~~~~~~~I~l~I----NSpGG~v~~~~-------------------~I~~~i~~~~~~v~t~~   95 (201)
T 3p2l_A           39 VNDHSANLVIAQLLFLESEDPDKDIYFYI----NSPGGMVTAGM-------------------GVYDTMQFIKPDVSTIC   95 (201)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEE----EECCBCHHHHH-------------------HHHHHHHHSSSCEEEEE
T ss_pred             ECHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECCCCCHHHHH-------------------HHHHHHHHhCCCeEEEE
Confidence            78899999999999988776666655532    25556553211                   12333556789999999


Q ss_pred             CCcccccccccccccCE--EEEeCCeeEecccccccccCCCchHH-------HHhhcc-----------HH--H-HHHHh
Q 018834          138 NGVTMGGGAGVSIPGTF--RVACGKTVFATPETLIGFHPDAGASF-------YLSHLP-----------GH--L-GEFLA  194 (350)
Q Consensus       138 ~G~~~GgG~~Lal~~D~--riate~a~f~~Pe~~iGl~P~~G~s~-------~L~rl~-----------g~--~-a~~l~  194 (350)
                      .|.|.++|.-|+++||.  |++.+++.+.+....-|.   .|-..       .+.++-           |.  . ...++
T Consensus        96 ~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~~  172 (201)
T 3p2l_A           96 IGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDT  172 (201)
T ss_dssp             EEEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHT
T ss_pred             cCEehhHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHh
Confidence            99999999999999998  999999998776654332   11110       111111           10  1 12333


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSE  218 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~  218 (350)
                      -....++|+||+++||||+++++.
T Consensus       173 ~~~~~lta~EA~e~GliD~I~~~~  196 (201)
T 3p2l_A          173 DRDNFMMADEAKAYGLIDHVIESR  196 (201)
T ss_dssp             SSCEEEEHHHHHHHTSCSEECCCS
T ss_pred             hcCeeecHHHHHHcCCccEecCCH
Confidence            333456999999999999999763

>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A

Probab=97.86  E-value=8.5e-05  Score=75.32  Aligned_cols=86  Identities=14%  Similarity=-0.033  Sum_probs=64.7

Q ss_pred             HHHHHHHHHHHHHcCCCceEEEEEcCCCccccC-CChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Q 018834           62 MGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAG-GDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGV  140 (350)
Q Consensus        62 m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~  140 (350)
                      ....+.+.|+.++.|+.++.|+|.-+    |.| +++....                .+++.+..+....|||||.+++ 
T Consensus        71 ~~~~i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~~----------------~I~~~i~~~k~~gkpvva~~~~-  129 (593)
T 3bf0_A           71 SLFDIVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSMQ----------------YIGKALKEFRDSGKPVYAVGEN-  129 (593)
T ss_dssp             EHHHHHHHHHHHHHCTTCCCEEEECT----EEEECCHHHHH----------------HHHHHHHHHHHTTCCEEEEESC-
T ss_pred             CHHHHHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHHH----------------HHHHHHHHHHhcCCeEEEEEcc-
Confidence            46778889999999999999999764    444 6654332                2334444455557999999887 


Q ss_pred             ccccccccccccCEEEEeCCeeEecccc
Q 018834          141 TMGGGAGVSIPGTFRVACGKTVFATPET  168 (350)
Q Consensus       141 ~~GgG~~Lal~~D~riate~a~f~~Pe~  168 (350)
                      +.-+|.-|+++||.+++.+++.++.-.+
T Consensus       130 aas~~y~lAsaad~i~~~P~~~vg~~g~  157 (593)
T 3bf0_A          130 YSQGQYYLASFANKIWLSPQGVVDLHGF  157 (593)
T ss_dssp             EEHHHHHHHTTSSEEEECTTCCEECCCC
T ss_pred             chhHHHHHHHhCCEEEECCCceEEEecc
Confidence            5567789999999999999988776554

>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A

Probab=97.83  E-value=0.0002  Score=62.44  Aligned_cols=142  Identities=10%  Similarity=0.098  Sum_probs=88.9

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCce--EEEEEcCCCc----cccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCC
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRA----FCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLK  131 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~--~vvl~g~g~~----F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~k  131 (350)
                      ++.++.+.+...|..++.++..+  .|.|-+.|..    .-.-||+.+-                   ..+...|...+.
T Consensus        37 I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v~ag-------------------laIyd~m~~~~~   97 (205)
T 4gm2_A           37 IYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGITDV-------------------ISIVDVINYISS   97 (205)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHHHHH-------------------HHHHHHHHHSSS
T ss_pred             EcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCHHHH-------------------HHHHHHHHhcCC
Confidence            88999999999999887543333  3444554411    1111333221                   122334556789


Q ss_pred             cEEEEECCcccccccccccccC--EEEEeCCeeEecccccccc-c---CCCch-HHHHhhccHHH-H-------------
Q 018834          132 PHVAILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGF-H---PDAGA-SFYLSHLPGHL-G-------------  190 (350)
Q Consensus       132 P~Ia~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl-~---P~~G~-s~~L~rl~g~~-a-------------  190 (350)
                      ||...+.|.|.+.|.-|+++++  .|++.+++++-+-....|. .   .|.-- ...+-++-... .             
T Consensus        98 ~V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I  177 (205)
T 4gm2_A           98 DVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIPFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVI  177 (205)
T ss_dssp             CEEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCCSSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred             CEEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence            9999999999999999999998  5999999998776655443 1   11100 01111111111 1             


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCC
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSE  218 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~  218 (350)
                      ..++-....++|+||+++||||+|+++|
T Consensus       178 ~~~m~rd~~msa~EA~eyGlID~V~~~e  205 (205)
T 4gm2_A          178 SNVLERDKYFNADEAVDFKLIDHILEKE  205 (205)
T ss_dssp             HHHTTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred             HHHhcCCcccCHHHHHHcCCccEeecCC
Confidence            2233345568999999999999998754

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4

Probab=97.57  E-value=0.00017  Score=72.59  Aligned_cols=155  Identities=12%  Similarity=0.061  Sum_probs=99.5

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834           44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI  123 (350)
Q Consensus        44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (350)
                      |.++-.+..-...++.....+.+.++++.+.+. .+-+|.|.-     |+|+.+.+-....... ... .+.+.    -.
T Consensus       107 v~v~a~D~t~~gGs~g~~~~~Ki~r~~e~A~~~-~lPvI~l~d-----SgGArlqe~~~~l~~~-~~~-g~i~~----~~  174 (587)
T 1pix_A          107 CVVVASDNKKLAGAWVPGQAECLLRASDTAKTL-HVPLVYVLN-----CSGVKFDEQEKVYPNR-RGG-GTPFF----RN  174 (587)
T ss_dssp             EEEEEECTTTTTTEECTTHHHHHHHHHHHHHHH-TCCEEEEEC-----CCEECGGGHHHHSSST-TST-THHHH----HH
T ss_pred             EEEEEECCccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEe-----CCCCCccccchhcccc-ccH-HHHHH----HH
Confidence            334444444456788889999999999988876 456676654     4566665432221100 000 11222    23


Q ss_pred             HHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEec--ccccccccCCCchHHHHhhccHHH-HHHHh-hcCC
Q 018834          124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFAT--PETLIGFHPDAGASFYLSHLPGHL-GEFLA-LTGA  198 (350)
Q Consensus       124 ~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~--Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~-ltG~  198 (350)
                      ..+.....|+|+++.|.|.|||... ..||++|+.++ +.+++  |++-=++.|-       -. .+.. +..++ .||+
T Consensus       175 ~~ls~~giP~Isvv~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~vi~~~~~~-------~~-~d~~~A~el~~~tge  245 (587)
T 1pix_A          175 AELNQLGIPVIVGIYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAGIMGGMNPK-------GH-VDLEYANEIADMVDR  245 (587)
T ss_dssp             HHHHHTTCCEEEEECSEEETHHHHH-HHSSSEEEEETTCEEESCCCTTCCSCCSS-------SS-CCHHHHHHHHHHHHT
T ss_pred             HHHhCCCCCEEEEEecCCcHHHHHH-HhcCceEEecCCcEEEecCHHHHhhhccc-------cc-cchhHHHHHHHHhCC
Confidence            4466788999999999999999999 88999988774 77765  2221111110       01 3334 78888 8998


Q ss_pred             CCCHHH-----HH--HCCCCccccCCCC
Q 018834          199 KLNGAE-----MM--ACGLATHYSVSEK  219 (350)
Q Consensus       199 ~l~a~e-----A~--~~GLv~~vv~~~~  219 (350)
                      .+++++     .+  ..|++|+++++++
T Consensus       246 ~v~~e~lgga~~h~~~~GvvD~vv~~e~  273 (587)
T 1pix_A          246 TGKTEPPGAVDIHYTETGFMREVYASEE  273 (587)
T ss_dssp             TCCCCCSSBHHHHTTTSCCSCEEESSHH
T ss_pred             ccChhhcccHHHHHhhcCceeEecCCHH
Confidence            887655     33  5999999998765

>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}

Probab=97.56  E-value=0.0026  Score=58.36  Aligned_cols=151  Identities=9%  Similarity=0.060  Sum_probs=93.2

Q ss_pred             eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +|.-..|.-|.+. ..-+++....+.+.++++.+... .+-+|.|.-+|++     -..+       +. ... ......
T Consensus       119 ~G~~V~v~a~d~~~~gGs~g~~~~~K~~r~ie~A~~~-~lPlI~l~dsgGa-----r~qE-------Gi-~sl-~q~aki  183 (285)
T 2f9i_B          119 DGMKFGVAVMDSRFRMGSMGSVIGEKICRIIDYCTEN-RLPFILFSASGGA-----RMQE-------GI-ISL-MQMGKT  183 (285)
T ss_dssp             TTEEEEEEEECTTTGGGCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEECSC-----CGGG-------HH-HHH-HHHHHH
T ss_pred             CCEEEEEEEEccccccCcCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCc-----chhh-------hh-hhH-hHHHHH
Confidence            3443333344443 45789999999999999988876 5677777654332     2211       10 111 112333


Q ss_pred             HHHHHHHhcCCCcEEEEECCccccccccc-ccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCC
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGV-SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA  198 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~L-al~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~  198 (350)
                      .....++.....|+|+++-|.|.||+... ++.+|++++.+++.+++       ...-+....+.+-.         .-.
T Consensus       184 ~~~l~~~s~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~-------aGP~vi~~~~~~~~---------~e~  247 (285)
T 2f9i_B          184 SVSLKRHSDAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGF-------AGRRVIEQTINEKL---------PDD  247 (285)
T ss_dssp             HHHHHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEES-------SCHHHHHHHHTSCC---------CTT
T ss_pred             HHHHHHHHcCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEE-------cCHHHHHHHhcccc---------hHh
Confidence            44556667789999999999999999654 78899999998876654       21111111111111         000


Q ss_pred             CCCHHHHHHCCCCccccCCCChHH
Q 018834          199 KLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       199 ~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                      --.++.+.+.|++|.|++++++.+
T Consensus       248 ~~~Ae~~~~~G~iD~Iv~~~e~r~  271 (285)
T 2f9i_B          248 FQTAEFLLEHGQLDKVVHRNDMRQ  271 (285)
T ss_dssp             TTBHHHHHHTTCCSEECCGGGHHH
T ss_pred             HhhHHHHHhcCCccEEeChHHHHH
Confidence            113677789999999999876544

>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A

Probab=97.55  E-value=0.0016  Score=64.65  Aligned_cols=142  Identities=18%  Similarity=0.211  Sum_probs=93.7

Q ss_pred             eCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp-~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +|.-..|.-+.+ -..-++.....+.+.++++.+.++ .+-+|.|.-+     .|+.+.+       + ......+-+..
T Consensus        95 ~Gr~v~v~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dS-----gGaRmqE-------g-~~~l~~~~~i~  160 (530)
T 3iav_A           95 DGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKT-GCPVVGINDS-----GGARIQE-------G-VASLGAYGEIF  160 (530)
T ss_dssp             TTEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CSBCGGG-------T-HHHHHHHHHHH
T ss_pred             CCEEEEEEEECCCcceEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcC-----CCcchhh-------h-hhhHHHHHHHH
Confidence            344333444444 467889999999999999998876 5667777654     3444422       1 11122222222


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHHHHHHhhcCC
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA  198 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~  198 (350)
                      +.+ ..+.. ..|+|+++.|.|.|||......||++|++++ +.+.+.          |     |+++.      ..||+
T Consensus       161 ~~~-~~~s~-~iP~Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a----------G-----P~vi~------~~~ge  217 (530)
T 3iav_A          161 RRN-THASG-VIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT----------G-----PDVIK------TVTGE  217 (530)
T ss_dssp             HHH-HHTTT-TSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS----------C-----HHHHH------HHHCC
T ss_pred             HHH-HHHcC-CCCEEEEEecCcchHHHHHHHhCCEEEEecCCcEEEec----------C-----HHHHH------HHhCC
Confidence            222 22333 3999999999999999988889999999875 766642          1     11111      26889


Q ss_pred             CCCHHHH-------HHCCCCccccCCCC
Q 018834          199 KLNGAEM-------MACGLATHYSVSEK  219 (350)
Q Consensus       199 ~l~a~eA-------~~~GLv~~vv~~~~  219 (350)
                      .+++++.       ...|++|+++++|.
T Consensus       218 ~v~~e~LGGa~~h~~~sGv~d~va~de~  245 (530)
T 3iav_A          218 DVGFEELGGARTHNSTSGVAHHMAGDEK  245 (530)
T ss_dssp             CCCHHHHHBHHHHHHTSCCCSEEESSHH
T ss_pred             cCChhhcchHHHHHhccCceeEEecChH
Confidence            9999876       58999999998753

>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}

Probab=97.42  E-value=0.0021  Score=63.73  Aligned_cols=138  Identities=11%  Similarity=0.151  Sum_probs=91.4

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      .++-.+..-..-++.....+.+.++++.+.++ .+-+|.|.-+     .|+.+.+-.        .....+-+..+... 
T Consensus       108 ~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dS-----GGARmqeg~--------~sl~~~~~i~~~~~-  172 (531)
T 3n6r_B          108 YVFSQDFTVLGGSVSETHSKKICKIMDMAMQN-GAPVIGINDS-----GGARIQEGV--------DSLAGYGEVFQRNI-  172 (531)
T ss_dssp             EEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CCBCGGGTH--------HHHHHHHHHHHHHH-
T ss_pred             EEEEECCCcccccccHHHHHHHHHHHHHHHHc-CCCEEEEeCC-----CccccCccc--------chhhhHHHHHHHHH-
Confidence            33344443466889999999999999988775 4667776643     444443311        11112222222222 


Q ss_pred             HHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHH
Q 018834          125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA  203 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~  203 (350)
                      .+. -..|+|+++.|.|.|||......||++|+.++ +.+.       +   .|     |+++-      ..||+.++++
T Consensus       173 ~~s-~~iP~Isvv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~-------~---aG-----P~vI~------~~~ge~v~~E  230 (531)
T 3n6r_B          173 MAS-GVVPQISMIMGPCAGGAVYSPAMTDFIFMVKDSSYMF-------V---TG-----PDVVK------TVTNEQVSAE  230 (531)
T ss_dssp             HTT-TTSCEEEEECSCCBGGGGHHHHHSSEEEEETTTCBCB-------S---SC-----HHHHH------HHHCCCCCHH
T ss_pred             HHh-CCCCEEEEEeCCcchHHHHHhhhCCEEEEecCCceEe-------e---cC-----HHHHH------HHhCCccChh
Confidence            222 35999999999999999987777999999985 5443       3   11     12221      3789999999


Q ss_pred             HH-------HHCCCCccccCCCC
Q 018834          204 EM-------MACGLATHYSVSEK  219 (350)
Q Consensus       204 eA-------~~~GLv~~vv~~~~  219 (350)
                      +.       ...|++|.++++|.
T Consensus       231 ~LGGa~~h~~~sG~~d~v~~~e~  253 (531)
T 3n6r_B          231 ELGGATTHTRKSSVADAAFENDV  253 (531)
T ss_dssp             HHHBHHHHHHTTSCCSEEESSHH
T ss_pred             hcchHHHHhhccCcceEEeCCHH
Confidence            98       89999999998754

>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}

Probab=97.21  E-value=0.0086  Score=59.46  Aligned_cols=141  Identities=12%  Similarity=0.149  Sum_probs=91.5

Q ss_pred             eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +|.-..|.-+... ..-++.....+.+.++++.+.++ .+-+|.|..     |.|+.+.+-.        .....+-+..
T Consensus        89 ~Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~-----SGGaRmqeg~--------~sl~~~~~i~  154 (522)
T 1x0u_A           89 DGRTVFAYAQDFTVLGGSLGETHANKIVRAYELALKV-GAPVVGIND-----SGGARIQEGA--------LSLEGYGAVF  154 (522)
T ss_dssp             TTEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSBCGGGTH--------HHHHHHHHHH
T ss_pred             CCEEEEEEEecCceeCccccHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhHHH--------HHHHHHHHHH
Confidence            3443334444443 66789999999999999988875 567787775     4555554321        1112222222


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-e-eEecccccccccCCCchHHHHhhccHHHHHHHhhcC
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-T-VFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTG  197 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a-~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG  197 (350)
                      +.+. .+ .-..|+|+++.|.|.||+......||++|++++ + .+++          .|     |+++-      ..||
T Consensus       155 ~~~~-~~-s~~iP~Isvv~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~----------aG-----P~vI~------~~~g  211 (522)
T 1x0u_A          155 KMNV-MA-SGVIPQITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFV----------TG-----PEITK------VVLG  211 (522)
T ss_dssp             HHHH-HH-TTTSCEEEEECSEEEGGGGHHHHHSSEEEEECSTTCEEES----------SC-----HHHHH------HTTC
T ss_pred             HHHH-Hh-CCCCcEEEEEcCCCchHHHHHHhcCCeEEEecCCccEEEe----------cC-----HHHHH------HHhC
Confidence            2222 22 345999999999999999998889999999987 6 5543          11     12111      2677


Q ss_pred             CCCCHH-----HHH--HCCCCccccCCC
Q 018834          198 AKLNGA-----EMM--ACGLATHYSVSE  218 (350)
Q Consensus       198 ~~l~a~-----eA~--~~GLv~~vv~~~  218 (350)
                      +.++.+     +.+  ..|++|.+++++
T Consensus       212 e~~~~e~lggae~~~~~~G~~d~vv~~~  239 (522)
T 1x0u_A          212 EEVSFQDLGGAVVHATKSGVVHFMVDSE  239 (522)
T ss_dssp             CCCCHHHHHBHHHHHHTTCCCSEEESCH
T ss_pred             CcCChhhcchHHHHhhcCceeEEEeCCH
Confidence            888764     323  599999999964

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*

Probab=97.20  E-value=0.0059  Score=60.65  Aligned_cols=137  Identities=14%  Similarity=0.182  Sum_probs=90.5

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      .++-.+-.=..-++.....+.+.++++.+.++ .+-+|.|.-     |.|+.+.+-.        .....+-+..+.+. 
T Consensus        98 ~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~-----SGGARmqeg~--------~sl~~~~~i~~~~~-  162 (523)
T 1on3_A           98 HAASQDFTVMGGSAGETQSTKVVETMEQALLT-GTPFLFFYD-----SGGARIQEGI--------DSLSGYGKMFFANV-  162 (523)
T ss_dssp             EEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEE-----ECSBCGGGTH--------HHHHHHHHHHHHHH-
T ss_pred             EEEEEcCCccCCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhhHH--------HHHHHHHHHHHHHH-
Confidence            33344433367889999999999999988875 566777764     5566654321        11122222222222 


Q ss_pred             HHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHH-
Q 018834          125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA-  203 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~-  203 (350)
                      .+ .-..|+|+++.|.|.||+......||++|+++++.+++.          |     |+++-      ..||+.++.+ 
T Consensus       163 ~~-s~~iP~Isvv~gp~~GG~a~s~~l~D~ii~~~~a~i~~a----------G-----P~vI~------~~~ge~~~~e~  220 (523)
T 1on3_A          163 KL-SGVVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT----------G-----PQVIK------SVTGEDVTADE  220 (523)
T ss_dssp             HH-TTTSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESS----------C-----HHHHH------HHHCCCCCHHH
T ss_pred             Hh-cCCCCEEEEEcCCCchHHHHHHhhCCeEEEeCCCEEEec----------C-----HHHHH------HHhCCcCChHh
Confidence            22 335999999999999999998889999999988765543          1     12211      2567777764 


Q ss_pred             ----HHH--HCCCCccccCCC
Q 018834          204 ----EMM--ACGLATHYSVSE  218 (350)
Q Consensus       204 ----eA~--~~GLv~~vv~~~  218 (350)
                          +.+  ..|++|.+++++
T Consensus       221 lggae~h~~~~G~vd~vv~d~  241 (523)
T 1on3_A          221 LGGAEAHMAISGNIHFVAEDD  241 (523)
T ss_dssp             HHSHHHHHHTTCCCSEEESSH
T ss_pred             cccHHHHhhccCceEEEeCCH
Confidence                333  599999999864

>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A

Probab=97.06  E-value=0.01  Score=59.24  Aligned_cols=141  Identities=15%  Similarity=0.166  Sum_probs=91.0

Q ss_pred             eCCEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRP-SALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp-~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +|.-..|.-+.. -..-++.....+.+.++++.+.++ .+-+|.|.-     |.|+.+.+-.        .....+-+..
T Consensus       106 ~Gr~v~v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~d-----SGGARmqeg~--------~sl~~~~~i~  171 (548)
T 2bzr_A          106 DGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKT-GRPLIGIND-----GAGARIQEGV--------VSLGLYSRIF  171 (548)
T ss_dssp             TTEEEEEEEECTTSGGGCCCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSCCGGGTT--------HHHHHHHHHH
T ss_pred             CCEEEEEEEEcCccccCCCChhHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCCchhHH--------HHHHHHHHHH
Confidence            343333333443 366789999999999999988875 567777765     4555554311        1112222222


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHHHHHHhhcCC
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA  198 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~  198 (350)
                      +.+. .+ .-..|+|+++.|.|.||+......||++|+.++ +.+.+.          |     |+++-      ..||+
T Consensus       172 ~~~~-~~-s~~iP~Isvv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a----------G-----P~vI~------~~~ge  228 (548)
T 2bzr_A          172 RNNI-LA-SGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT----------G-----PDVIK------TVTGE  228 (548)
T ss_dssp             HHHH-HT-TTTSCEEEEECSEEESGGGHHHHHSSEEEEETTTCEEESS----------C-----HHHHH------HHHCC
T ss_pred             HHHH-Hh-cCCCcEEEEecCCCchHHHHHHHhCCeEEeccCceeEEec----------c-----HHHHH------HHhCC
Confidence            2222 22 334999999999999999988889999999986 655432          1     12211      25677


Q ss_pred             CCCHH-----HHH--HCCCCccccCCC
Q 018834          199 KLNGA-----EMM--ACGLATHYSVSE  218 (350)
Q Consensus       199 ~l~a~-----eA~--~~GLv~~vv~~~  218 (350)
                      .++.+     +.+  ..|++|.+++++
T Consensus       229 ~v~~e~lggae~h~~~sG~~d~vv~d~  255 (548)
T 2bzr_A          229 EVTMEELGGAHTHMAKSGTAHYAASGE  255 (548)
T ss_dssp             CCCHHHHHBHHHHHHTSSCCSEEESSH
T ss_pred             cCChHhcccHHHHhhccCceeEEeCCH
Confidence            77764     323  599999999864

>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B

Probab=97.03  E-value=0.0046  Score=61.60  Aligned_cols=142  Identities=18%  Similarity=0.164  Sum_probs=92.0

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCcccc-CCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCA-GGDIVSLYHFMNQGKLEECKDFFRTLYSFI  123 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~a-G~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (350)
                      .++-.+..-..-++.....+.+.++++.+.++ .+-+|.|.-+|.+... +.++  +.      ......+.+.    -.
T Consensus       124 ~V~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSgGARl~~q~~~--~~------~~~~~~~i~~----~~  190 (555)
T 3u9r_B          124 MIVGNDATVKGGTYYPLTVKKHLRAQAIALEN-RLPCIYLVDSGGANLPRQDEV--FP------DREHFGRIFF----NQ  190 (555)
T ss_dssp             EEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCCCBCGGGGGGT--SS------STTSTTHHHH----HH
T ss_pred             EEEEECCccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEECCCCCCCCCccee--ec------ccccHHHHHH----HH
Confidence            34444444466788999999999999998876 5667766654433321 0000  00      0000011222    22


Q ss_pred             HHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHH
Q 018834          124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA  203 (350)
Q Consensus       124 ~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~  203 (350)
                      ..+.....|+|+++.|.|.|||......||++|+.++      ...+|+   .|     |+++-      ..||+.++++
T Consensus       191 ~~ls~~giP~Isvv~G~~~GGga~~~a~~d~vim~e~------~a~i~~---aG-----P~vik------~~~ge~~~~e  250 (555)
T 3u9r_B          191 ANMSARGIPQIAVVMGSCTAGGAYVPAMSDETVMVRE------QATIFL---AG-----PPLVK------AATGEVVSAE  250 (555)
T ss_dssp             HHHHHTTCCEEEEECSCCBGGGGHHHHTSSEEEEETT------TCBCBS---SC-----HHHHH------HHHCCCCCHH
T ss_pred             HHHhcCCCCEEEEEecCCCccHHHHHHhCCceEEecC------CceEEE---cc-----HHHHH------HHhcCccChh
Confidence            3345678999999999999999999899999887763      124444   21     12211      3789999999


Q ss_pred             HH-------HHCCCCccccCCCC
Q 018834          204 EM-------MACGLATHYSVSEK  219 (350)
Q Consensus       204 eA-------~~~GLv~~vv~~~~  219 (350)
                      +.       ...|++|.+++++.
T Consensus       251 ~LGGa~~h~~~sGv~d~v~~de~  273 (555)
T 3u9r_B          251 ELGGADVHCKVSGVADHYAEDDD  273 (555)
T ss_dssp             HHHBHHHHHHTTCSCSEEESSHH
T ss_pred             hccchhhhhhccCceeEEeCCHH
Confidence            98       78999999998765

>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4

Probab=96.68  E-value=0.027  Score=55.95  Aligned_cols=137  Identities=15%  Similarity=0.182  Sum_probs=86.4

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      .++-.+..-..-++.....+.+.++++.+.+. .+-+|.|.-+     .|+.+.+-.        .....+-+..+... 
T Consensus       101 ~v~a~D~t~~gGS~g~~~~~Ki~r~~e~A~~~-~lPvI~l~dS-----gGAR~qeg~--------~~l~g~~~~~~~~~-  165 (527)
T 1vrg_A          101 AVFSQDFTVMGGSLGEMHAKKIVKLLDLALKM-GIPVIGINDS-----GGARIQEGV--------DALAGYGEIFLRNT-  165 (527)
T ss_dssp             EEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEEE-----CSBCGGGTH--------HHHHHHHHHHHHHH-
T ss_pred             EEEEEeccccCccccHHHHHHHHHHHHHHHHc-CCCEEEEECC-----CCCCccchh--------HHHHHHHHHHHHHH-
Confidence            33444433356789999999999999988875 4566666543     344443211        11111222222222 


Q ss_pred             HHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHH
Q 018834          125 LLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA  203 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~  203 (350)
                      . ..-..|+|+++.|.|.|||......||++|+.++ +.       +|+   .|     |++     .. ..||+.++.+
T Consensus       166 ~-~s~~iP~Isvv~Gp~~GG~a~s~al~D~vi~~~~~a~-------i~~---aG-----P~v-----i~-~~~ge~v~~e  223 (527)
T 1vrg_A          166 L-ASGVVPQITVIAGPCAGGAVYSPALTDFIVMVDQTAR-------MFI---TG-----PNV-----IK-AVTGEEISQE  223 (527)
T ss_dssp             H-HTTTSCEEEEEEEEEBGGGGHHHHHSSEEEEETTTCB-------CBS---SC-----HHH-----HH-HHHCCCCCHH
T ss_pred             H-hCCCCCEEEEEeCCCchHHHHHHHcCCeEEEecCceE-------EEe---cC-----HHH-----HH-HHhCCCCCcc
Confidence            2 2456999999999999999988889999999987 54       333   11     111     11 2567777763


Q ss_pred             -----HHH--HCCCCccccCCC
Q 018834          204 -----EMM--ACGLATHYSVSE  218 (350)
Q Consensus       204 -----eA~--~~GLv~~vv~~~  218 (350)
                           +.+  ..|++|.+++++
T Consensus       224 ~lggae~~~~~~G~vd~vv~d~  245 (527)
T 1vrg_A          224 DLGGAMVHNQKSGNAHFLADND  245 (527)
T ss_dssp             HHHBHHHHHHTSCCCSEEESSH
T ss_pred             ccccHHHHhhcccceEEEecCH
Confidence                 323  599999999864

>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}

Probab=96.54  E-value=0.026  Score=56.04  Aligned_cols=156  Identities=16%  Similarity=0.175  Sum_probs=95.5

Q ss_pred             CCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834           42 ANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY  120 (350)
Q Consensus        42 ~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      |.-..|.-|+|. ...+++.+..+.+.+.++.+... ++-+|.|.-.+ .|-.|.+    .         .....++..-
T Consensus       324 G~~V~via~d~~~~gG~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds~-G~~~G~~----~---------E~~G~~~~~A  388 (522)
T 1x0u_A          324 GNVVGIVANNPEEFGGSIDIDAADKAARFIRFCDAF-NIPLISLVDTP-GYVPGTD----Q---------EYKGIIRHGA  388 (522)
T ss_dssp             TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCSHH----H---------HHTTHHHHHH
T ss_pred             CEEEEEEEECCCccCCCcCHHHHHHHHHHHHHHhhC-CCCEEEEecCC-CCCCchH----H---------HHHHHHHHHH
Confidence            333334444544 33579999999999999988764 66777766432 2333311    1         1111223444


Q ss_pred             HHHHHHhcCCCcEEEEECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhhcc----------
Q 018834          121 SFIYLLGTHLKPHVAILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP----------  186 (350)
Q Consensus       121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~----------  186 (350)
                      ++++.+.+...|+|+++-|.+.|||+-..    +.+|++++.+++.+++       ...-|+.-.+.+-.          
T Consensus       389 k~l~~~~~~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v-------~gpegaa~Il~r~~i~~~~d~~~~  461 (522)
T 1x0u_A          389 KMLYAFAEATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAV-------TGPEGAVRILYRKEIQQASNPDDV  461 (522)
T ss_dssp             HHHHHHHHCCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTSSSSSSSSSSSSS
T ss_pred             HHHHHHHhCCCCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEEe-------cCHHHHHHHHhhhhhhcccCHHHH
Confidence            56777888999999999999999976333    3599999988876654       32233332222211          


Q ss_pred             -HHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          187 -GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       187 -g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                       ... ..|--   ..-++..+.+.|+||.|+++.++..
T Consensus       462 ~~~l~~~y~~---~~~~~~~~~~~G~iD~II~p~~tR~  496 (522)
T 1x0u_A          462 LKQRIAEYRK---LFANPYWAAEKGLVDDVIEPKDTRR  496 (522)
T ss_dssp             SHHHHHHHHH---HHSSSHHHHHTTSSSEECCGGGHHH
T ss_pred             HHHHHHHHHH---hcCCHHHHHhcCCCcEeECHHHHHH
Confidence             111 11111   1135577999999999999877654

>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4

Probab=96.38  E-value=0.039  Score=54.77  Aligned_cols=156  Identities=13%  Similarity=0.102  Sum_probs=94.8

Q ss_pred             EEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI  123 (350)
Q Consensus        45 ~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (350)
                      ..|.=|+|. ....++.+-.+...+.++.++. .++-+|.|.-. ..|..|.+-.             .....+..-+++
T Consensus       332 V~via~~~~~~~G~~~~~~~~Kaar~i~~a~~-~~~Plv~lvDt-pG~~~G~~~E-------------~~g~~~~~A~~~  396 (527)
T 1vrg_A          332 VGIVANQPSVLAGVLDIDSSDKAARFIRFLDA-FNIPILTFVDT-PGYLPGVAQE-------------HGGIIRHGAKLL  396 (527)
T ss_dssp             EEEEEECTTSGGGCBCHHHHHHHHHHHHHHHH-TTCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHHHHHH
T ss_pred             EEEEEEcCcccCCCCCHHHHHHHHHHHHHHhh-cCCCeEEEecC-CCCcCchhhH-------------HhHHHHHHHHHH
Confidence            334445554 2347999999999999988865 35666655432 2344442211             111233344567


Q ss_pred             HHHhcCCCcEEEEECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhhcc-H----HHH--HH
Q 018834          124 YLLGTHLKPHVAILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-G----HLG--EF  192 (350)
Q Consensus       124 ~~i~~~~kP~Ia~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~-g----~~a--~~  192 (350)
                      +.+.+...|+|++|=|.+.|||+--.    +.+|+++|.+++.++       ..+.-|+...+.|.. .    ...  ..
T Consensus       397 ~a~~~~~vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~  469 (527)
T 1vrg_A          397 YAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGAANIIFKREIEASSNPEETRRK  469 (527)
T ss_dssp             HHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHH
T ss_pred             HHHhcCCCCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHH
Confidence            77788999999999999988876332    238887777666555       554455555554421 0    010  11


Q ss_pred             Hh--hcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          193 LA--LTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       193 l~--ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                      +.  +.-..-++..+.+.|+||.|+++.+...
T Consensus       470 ~~~~y~~~~~~p~~~~~~g~iD~II~p~~tR~  501 (527)
T 1vrg_A          470 LIEEYKQQFANPYIAASRGYVDMVIDPRETRK  501 (527)
T ss_dssp             HHHHHHHHTSSHHHHHHTTSSSEECCGGGHHH
T ss_pred             HHHHHHHhhCCHHHHHHcCCCCeeeCHHHHHH
Confidence            11  1111356788999999999999876543

>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4

Probab=96.23  E-value=0.16  Score=51.05  Aligned_cols=149  Identities=16%  Similarity=0.113  Sum_probs=99.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      ...++.+-.....+.++.++. .++-+|.|.-. .+|..|.+-             +.....+..-++++.+.++..|+|
T Consensus       384 ~G~l~~~~a~Kaarfi~~c~~-~~iPlv~lvDt-pGf~~G~~~-------------E~~Gi~~~gA~~~~a~a~a~vP~i  448 (587)
T 1pix_A          384 GGKLYRQGLVKMNEFVTLCAR-DRLPIVWIQDT-TGIDVGNDA-------------EKAELLGLGQSLIYSIQTSHIPQF  448 (587)
T ss_dssp             TTEECHHHHHHHHHHHHHHHH-TTCCEEEEECC-CEECCSHHH-------------HHTTHHHHHHHHHHHHHTCCCCEE
T ss_pred             CCCcCHHHHHHHHHHHHHhhc-CCCCeEEEecC-CCCCCcHHH-------------HHHHHHHHHHHHHHHHHhCCCCEE
Confidence            357999999999999987765 46777777644 455555321             112234556678888999999999


Q ss_pred             EEECCcccccccccccc-----c--CEEEEeCCeeEecccccccccCCCchHHHHhhccHH------------------H
Q 018834          135 AILNGVTMGGGAGVSIP-----G--TFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGH------------------L  189 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~-----~--D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~------------------~  189 (350)
                      +.|=|.+.|||. ++++     +  |++++.+++.++       +.+.-|++..+.+..-.                  .
T Consensus       449 tvI~g~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~  520 (587)
T 1pix_A          449 EITLRKGTAAAH-YVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNL  520 (587)
T ss_dssp             EEECSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred             EEEcCCCccHHH-HHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHH
Confidence            999999988874 4443     4  887777766555       55445555444432211                  1


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHHHh
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELGKL  230 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~~l  230 (350)
                       ..|-    +..++..|.+.|++|.|+++.+... +...|+.+
T Consensus       521 ~~~y~----~~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~  559 (587)
T 1pix_A          521 IQAFY----TKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAA  559 (587)
T ss_dssp             HHHHH----HTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHH
T ss_pred             HHHHH----HhCCHHHHHhcCCCccccCHHHHHHHHHHHHHHH
Confidence             1111    2478899999999999999887654 44444443

>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*

Probab=96.14  E-value=0.053  Score=53.77  Aligned_cols=161  Identities=16%  Similarity=0.083  Sum_probs=98.2

Q ss_pred             EEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           46 MAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        46 ~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      .|.=|+|. ....++.+-.+...+.++.++. .++-+|.|.-. ..|..|.+-.             .....+..-++++
T Consensus       329 gvian~~~~~~G~~~~~~a~Kaar~i~~~~~-~~iPlv~lvDt-pGf~~G~~~E-------------~~Gi~~~~A~~l~  393 (523)
T 1on3_A          329 GIVANQPSVMSGCLDINASDKAAEFVNFCDS-FNIPLVQLVDV-PGFLPGVQQE-------------YGGIIRHGAKMLY  393 (523)
T ss_dssp             EEEEECTTSGGGCBCHHHHHHHHHHHHHHHH-TTCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHHHHHHH
T ss_pred             EEEEecCCccCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeC-CCcCcchHHH-------------HhhHHHHHHHHHH
Confidence            33445554 2247999999999999988865 35666655433 3455553221             1122344556777


Q ss_pred             HHhcCCCcEEEEECCccccccccccc----ccCEEEEeCCeeEecccccccccCCCchHHHHhhcc-H----HHH--HHH
Q 018834          125 LLGTHLKPHVAILNGVTMGGGAGVSI----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-G----HLG--EFL  193 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~~Lal----~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~-g----~~a--~~l  193 (350)
                      .+.+...|+|++|=|.+.|||+.-..    .+|++++.+++.++       ..+.-|++..+.|-- .    ...  ..+
T Consensus       394 a~a~~~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~  466 (523)
T 1on3_A          394 AYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGAANVIFRKEIKAADDPDAMRAEK  466 (523)
T ss_dssp             HHHHCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHH
T ss_pred             HHhcCCCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHH
Confidence            78889999999999999988864333    37887777666554       554455555454421 0    010  011


Q ss_pred             h--hcCCCCCHHHHHHCCCCccccCCCChHH-HHHHHH
Q 018834          194 A--LTGAKLNGAEMMACGLATHYSVSEKLPL-IEEELG  228 (350)
Q Consensus       194 ~--ltG~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~  228 (350)
                      .  +.-..-++.++.+.|+||.|+++.+... +.+.|.
T Consensus       467 ~~~y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~  504 (523)
T 1on3_A          467 IEEYQNAFNTPYVAAARGQVDDVIDPADTRRKIASALE  504 (523)
T ss_dssp             HHHHHHHHSSHHHHHHTTSSSEECCGGGHHHHHHHHHH
T ss_pred             HHHHHHhhCCHHHHHhcCCCCEeeCHHHHHHHHHHHHH
Confidence            1  0011246678999999999999876553 334443

>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*

Probab=95.89  E-value=0.051  Score=54.50  Aligned_cols=159  Identities=13%  Similarity=0.066  Sum_probs=90.0

Q ss_pred             EEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHH
Q 018834           46 MAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL  125 (350)
Q Consensus        46 ~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~  125 (350)
                      ++-.+..-+.-++.....+.+.++++.+.+. .+-+|.|.-+|.++..  +-.+..    ....... +.|..    ...
T Consensus       110 V~a~D~tv~gGS~g~~~~~Ki~Ra~e~A~~~-~lPvI~l~dSgGArl~--~qe~~~----~~l~~~g-~if~~----~~~  177 (588)
T 3gf3_A          110 IVASDNKKMAGAWVPGQAENLIRCSDAAKMM-HLPLIYLLNCSGVEFP--NQDKVY----PNRRGGG-TPFFR----NSE  177 (588)
T ss_dssp             EEEECTTSGGGCBCTTHHHHHHHHHHHHHHH-TCCEEEEECCCCBCGG--GHHHHS----SSTTSTT-HHHHH----HHH
T ss_pred             EEEECCcccCCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEcCCCcCcc--cccccc----cchhhHH-HHHHH----HHH
Confidence            3333433366788889999999999988875 4667776654433331  001110    0000001 11222    233


Q ss_pred             HhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEec--ccccccccCCCchHHHHhhcc---HHH-HHHHhhcCCC
Q 018834          126 LGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT--PETLIGFHPDAGASFYLSHLP---GHL-GEFLALTGAK  199 (350)
Q Consensus       126 i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~--Pe~~iGl~P~~G~s~~L~rl~---g~~-a~~l~ltG~~  199 (350)
                      +.....|+|+++-|.|.|||...++.+|+.++.+++.+.+  |.+--|+-|.+   .+.+.-+   ... +.+-..+-+.
T Consensus       178 ls~~~iP~Isvv~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g---~~~~~~~~~~~~~~~ge~~vs~ee  254 (588)
T 3gf3_A          178 LNQLGIPVIVGIYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKG---YIDDEAAEQIIAAQIENSKLKVPA  254 (588)
T ss_dssp             HHHTTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCC
T ss_pred             HhcCCCCEEEEEeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCccc---cccccchhhhhhhhccccccChhh
Confidence            4556899999999999999886688888888888887665  33321211110   0111111   011 1111156777


Q ss_pred             CCHHHHH--HCCCCccccCCCC
Q 018834          200 LNGAEMM--ACGLATHYSVSEK  219 (350)
Q Consensus       200 l~a~eA~--~~GLv~~vv~~~~  219 (350)
                      +.+.+..  ..|++|+++++|.
T Consensus       255 LGGa~~h~~~sGv~d~~a~de~  276 (588)
T 3gf3_A          255 PGSVPIHYDETGFFREVYQNDL  276 (588)
T ss_dssp             TTBHHHHTTTSCCSCEEESSHH
T ss_pred             ccchhhhccccccceEEeCCHH
Confidence            8888877  5999999998764

>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A

Probab=95.79  E-value=0.058  Score=53.75  Aligned_cols=160  Identities=17%  Similarity=0.184  Sum_probs=96.3

Q ss_pred             EEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHH
Q 018834           47 AILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYL  125 (350)
Q Consensus        47 ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~  125 (350)
                      |.=|+|. ...+++.+-.+...+.++.++.. ++-+|.|.-. ..|..|.+-.+             ....+..-++++.
T Consensus       351 vian~~~~~~G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt-~Gf~~G~~~E~-------------~Gi~~~ga~~l~a  415 (548)
T 2bzr_A          351 IVANQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQEY-------------NGIIRRGAKLLYA  415 (548)
T ss_dssp             EEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHH-------------TTHHHHHHHHHHH
T ss_pred             EEEECCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeec-cCCCCChHHHH-------------hhHHHHHHHHHHH
Confidence            3444544 23579999999999999988764 5666655432 33555532211             1123334456677


Q ss_pred             HhcCCCcEEEEECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhhccH-H------H-HHHH
Q 018834          126 LGTHLKPHVAILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-H------L-GEFL  193 (350)
Q Consensus       126 i~~~~kP~Ia~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g-~------~-a~~l  193 (350)
                      +.+...|+|++|=|.+.|||.--.    +.+|++++.+++.++       ..+.-|+.-.+.+.-- .      . +..+
T Consensus       416 ~~~~~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~-------Vmgpegaa~Il~r~~~~~~~~~g~~~~~~~  488 (548)
T 2bzr_A          416 YGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMGASGAVGFVYRQQLAEAAANGEDIDKLR  488 (548)
T ss_dssp             HHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTCCC----------CHHHH
T ss_pred             HhCCCCCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEE-------ecCHHHHHHHHhhhHHhhhhcccccHHHHH
Confidence            788999999999999998876432    348988888777665       4444444444443210 0      0 1000


Q ss_pred             h-hcC----CCCCHHHHHHCCCCccccCCCChHH-HHHHHH
Q 018834          194 A-LTG----AKLNGAEMMACGLATHYSVSEKLPL-IEEELG  228 (350)
Q Consensus       194 ~-ltG----~~l~a~eA~~~GLv~~vv~~~~l~~-~~~~l~  228 (350)
                      - ++.    ..-++.++.+.|++|.|+++.+... +.+.|.
T Consensus       489 ~~~~~~y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~  529 (548)
T 2bzr_A          489 LRLQQEYEDTLVNPYVAAERGYVGAVIPPSHTRGYIGTALR  529 (548)
T ss_dssp             HHHHHHHHHHHSBSHHHHHTTSSSEECCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCHHHHHhcCCCceeeCHHHHHHHHHHHHH
Confidence            0 111    1134567899999999999876654 344443

>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A

Probab=95.43  E-value=0.17  Score=50.12  Aligned_cols=155  Identities=17%  Similarity=0.213  Sum_probs=98.5

Q ss_pred             CCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834           42 ANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY  120 (350)
Q Consensus        42 ~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      |...-|.=|+|. ...+++.+..+...+.++.++.. ++-+|.|.-.. .|-.|-+-             +....++..-
T Consensus       331 G~~Vgvian~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtp-Gf~~G~~~-------------E~~gi~~~~A  395 (530)
T 3iav_A          331 GRPVGIVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVP-GFLPGVDQ-------------EHDGIIRRGA  395 (530)
T ss_dssp             TEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHH-------------HHTTHHHHHH
T ss_pred             CEEEEEEEecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCC-CCCccHHH-------------HHhhHHHHHH
Confidence            333444456664 22579999999999999888774 56666665432 25555331             1123456666


Q ss_pred             HHHHHHhcCCCcEEEEECCccccccccccc-----ccCEEEEeCCeeEecccccccccCCCchHHHHhhcc---------
Q 018834          121 SFIYLLGTHLKPHVAILNGVTMGGGAGVSI-----PGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP---------  186 (350)
Q Consensus       121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal-----~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~---------  186 (350)
                      ++++.+.+...|+|++|-|.+.|||. +++     .+|++++.+++.++       ..+.-|+.-.+.|--         
T Consensus       396 k~l~a~a~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~-------Vm~~egaa~il~r~~~~~~~~d~~  467 (530)
T 3iav_A          396 KLIFAYAEATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIA-------VMGAQGAVNILHRRTIADAGDDAE  467 (530)
T ss_dssp             HHHHHHHHCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTSTTTSTTCTTCH
T ss_pred             HHHHHHHhCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEe-------cCCHHHHHHHHhhhhhhhcccCHH
Confidence            78888999999999999999998775 333     37888888877666       433334433333210         


Q ss_pred             ---HHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          187 ---GHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       187 ---g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                         ... ..|-   -+.-++..|...|++|.|+++.+...
T Consensus       468 ~~~~~~~~~y~---~~~~~p~~aa~~~~vD~VIdP~~TR~  504 (530)
T 3iav_A          468 ATRARLIQEYE---DALLNPYTAAERGYVDAVIMPSDTRR  504 (530)
T ss_dssp             HHHHHHHHHHH---HHHSSSHHHHHTTSSSEECCGGGHHH
T ss_pred             HHHHHHHHHHH---HhcCCHHHHHhcCCCCcccCHHHHHH
Confidence               111 1111   11236667889999999999877653

>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}

Probab=95.15  E-value=0.15  Score=50.61  Aligned_cols=156  Identities=14%  Similarity=0.169  Sum_probs=97.3

Q ss_pred             CCEEEEEEcCCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834           42 ANSRMAILNRPSA-LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY  120 (350)
Q Consensus        42 ~~v~~ItLnrp~~-~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      |...-|.=|+|.. -..++.+..+...+.++.++.. ++-+|.|.-. ..|-.|.+-             +.....+..-
T Consensus       337 G~~Vgvian~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDt-pGf~~G~~~-------------E~~Gi~~~gA  401 (531)
T 3n6r_B          337 GRTVGVVANQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDV-PGFLPGTSQ-------------EYGGVIKHGA  401 (531)
T ss_dssp             TEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CSBCCSHHH-------------HHTTHHHHHH
T ss_pred             CEEEEEEEecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCC-CCCCCCHHH-------------HHhhHHHHHH
Confidence            3333344456542 2579999999999999887764 5666666543 234444221             1122345566


Q ss_pred             HHHHHHhcCCCcEEEEECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhhc-------cHHH
Q 018834          121 SFIYLLGTHLKPHVAILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-------PGHL  189 (350)
Q Consensus       121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-------~g~~  189 (350)
                      ++++.+.+...|+|++|=|.+.|||.--.    +.+|+++|.+++.++       ..+.-|++..+.|-       ....
T Consensus       402 k~l~a~a~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~-------Vm~pegaa~Il~r~~~~~~~~~~~~  474 (531)
T 3n6r_B          402 KLLYAYGEATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVA-------VMGAKGATEIIHRGDLGDPEKIAQH  474 (531)
T ss_dssp             HHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHCCTTTTSTTHHHHH
T ss_pred             HHHHHHHhCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEe-------cCCHHHHHHHHhcccccchhHHHHH
Confidence            78888999999999999999999886322    238998888777665       44334444333321       1111


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                       ..|.-..   -++..|...|++|.|+++.+-..
T Consensus       475 ~~~y~~~~---~~p~~aa~~~~vD~vIdP~~TR~  505 (531)
T 3n6r_B          475 TADYEERF---ANPFVASERGFVDEVIQPRSTRK  505 (531)
T ss_dssp             HHHHHHHH---SSSHHHHHHTSSSEECCGGGHHH
T ss_pred             HHHHHHHh---cCHHHHHhcCccCcccCHHHHHH
Confidence             2222211   34556788999999999877653

>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B

Probab=94.09  E-value=0.44  Score=47.44  Aligned_cols=142  Identities=11%  Similarity=0.032  Sum_probs=89.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      ..++.+..+...+.++.++.- ++-+|.|.-. ..|..|.+-.             .....+..-++++.+.+...|+|+
T Consensus       366 G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDt-pGf~~G~~~E-------------~~Gi~~~gAk~~~a~~~a~vP~it  430 (555)
T 3u9r_B          366 GILFAEAAQKGAHFIELACQR-GIPLLFLQNI-TGFMVGQKYE-------------AGGIAKHGAKLVTAVACARVPKFT  430 (555)
T ss_dssp             SSBCHHHHHHHHHHHHHHHHH-TCCEEEEEEE-CCBCCSHHHH-------------HTTHHHHHHHHHHHHHHCCSCEEE
T ss_pred             CccCHHHHHHHHHHHHHHhcC-CCCEEEEecC-cCCCCCHHHH-------------HHHHHHHHHHHHHHHHhCCCCEEE
Confidence            679999999999999988763 5677776644 2354453211             112344556678889999999999


Q ss_pred             EECCcccccccc-cc---cccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCC-------------
Q 018834          136 ILNGVTMGGGAG-VS---IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGA-------------  198 (350)
Q Consensus       136 ~i~G~~~GgG~~-La---l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~-------------  198 (350)
                      +|-|.+.|||.- ++   +.+|++++.+++.++       +...-|+...|...-   -..+.-.|+             
T Consensus       431 vi~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~-------Vmgpegaa~il~~~~---~~~~~~~g~~~~~~~~~~~~~~  500 (555)
T 3u9r_B          431 VLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIG-------VMGGEQAAGVLAQVK---REQAERAGQQLGVEEEAKIKAP  500 (555)
T ss_dssp             EEEEEEETTHHHHTTCGGGCCSEEEECTTCEEE-------SSCHHHHHHHHHHHH---HHHHHTTTCCCCHHHHHHHHHH
T ss_pred             EEeCCccchhhHhhcCccCCCCeEEEcCCcEEE-------cCCHHHHHHHHHHHH---HHHHHhccCCCCcchHHHHHHH
Confidence            999998888642 22   347888887776665       444444544443110   000111111             


Q ss_pred             -------CCCHHHHHHCCCCccccCCCChHH
Q 018834          199 -------KLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       199 -------~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                             ..++.-|-..|++|.|+++.+-..
T Consensus       501 ~~~~y~~~~~p~~aa~r~~vD~vIdP~~TR~  531 (555)
T 3u9r_B          501 ILEQYEHQGHPYYSSARLWDDGVIDPAQTRE  531 (555)
T ss_dssp             HHHHHHHHHSHHHHHHTTSSSCBCCGGGHHH
T ss_pred             HHHHHHHhCCHHHHhhccccCcccChHHHHH
Confidence                   135566667899999998877543

>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}

Probab=93.60  E-value=0.09  Score=47.16  Aligned_cols=52  Identities=12%  Similarity=0.022  Sum_probs=46.4

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       187 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  238 (256)
T 3trr_A          187 TALELAAKITANGPLAVAATKRIIIESAS---WAPEEAFAKQGEILMPIFVSEDA  238 (256)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHGGG---SCHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            45556688899999999999999999998   89999999999999999988864

>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*

Probab=93.55  E-value=0.77  Score=45.98  Aligned_cols=140  Identities=14%  Similarity=0.163  Sum_probs=92.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      ..++.+-.+.-.+.++.++.- ++-+|.|.-. ..|..|.+-.             .....+..-++++.+.++..|.|+
T Consensus       387 G~l~~~~a~Kaarfi~lcd~f-~iPlv~lvDt-pGf~~G~~aE-------------~~Gi~~~gAk~l~a~a~a~VP~it  451 (588)
T 3gf3_A          387 GKLYRQGLIKMNEFVTLCARD-RIPLIWLQDT-TGIDVGDEAE-------------KAELLGLGQSLIYSIENSKLPSLE  451 (588)
T ss_dssp             TEECHHHHHHHHHHHHHHHHT-TCCEEEEECC-CEECCSHHHH-------------HTTHHHHHHHHHHHHHHHCSCEEE
T ss_pred             CCcCHHHHHHHHHHHHHhhhc-CCCeEEEecC-CCCCCCHHHH-------------HHHHHHHHHHHHHHHHhCCCCEEE
Confidence            468999999999999988874 6777777644 4566663221             122345566788889999999999


Q ss_pred             EECCccccccccccccc-------CEEEEeCCeeEecccccccccCCCchHHHHhhc-c------H-----------HH-
Q 018834          136 ILNGVTMGGGAGVSIPG-------TFRVACGKTVFATPETLIGFHPDAGASFYLSHL-P------G-----------HL-  189 (350)
Q Consensus       136 ~i~G~~~GgG~~Lal~~-------D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-~------g-----------~~-  189 (350)
                      .|=|.+.|||. +++++       |+.++.+++.++       ..+.-|+.-.+.+. .      |           .. 
T Consensus       452 vI~g~~~Ggg~-~am~~~~~~~~~~~~~awp~A~~s-------Vm~pEgaa~Il~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (588)
T 3gf3_A          452 ITIRKASAAAH-YVLGGPQGNNTNVFSIGTGACEYY-------VMPGETAANAMYSRKLVKAKKAGEDLQPIIGKMNDMI  523 (588)
T ss_dssp             EESSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHC-------CHHHHHHHHHH
T ss_pred             EEcCCccHHHH-HHhcccccCCccceEEECCCceEE-------eCCHHHHHHHHhhhHHhhhhccccccchHHHHHHHHH
Confidence            99999988775 33332       366666666555       54444444444321 1      1           11 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                      ..|-    +..++.-|-..|++|.|+++.+...
T Consensus       524 ~~y~----~~~~p~~aA~r~~vD~VIdP~~TR~  552 (588)
T 3gf3_A          524 QMYT----DKSRPKYCTEKGMVDEIVDMTEVRP  552 (588)
T ss_dssp             HHHH----HTTSHHHHHHTTSSSEECCGGGHHH
T ss_pred             HHHH----HhCCHHHHHhcCCCCeeeCHHHHHH
Confidence            2222    1347888889999999999887654

>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*

Probab=93.45  E-value=0.11  Score=47.20  Aligned_cols=52  Identities=8%  Similarity=0.041  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       209 ~a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  260 (278)
T 3h81_A          209 EARATATTISQMSASAARMAKEAVNRAFE---SSLSEGLLYERRLFHSAFATEDQ  260 (278)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHTTT---SCHHHHHHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            45556678899999999999999999998   89999999999999999988774

>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}

Probab=93.02  E-value=0.18  Score=45.68  Aligned_cols=52  Identities=15%  Similarity=0.156  Sum_probs=46.5

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       209 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  260 (278)
T 4f47_A          209 KALEIAEIIAANGPLAVQAILRTIRETEG---MHENEAFKIDTRIGIEVFLSDDA  260 (278)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHHHHHHHTTT---SCHHHHHHHHHHHHGGGGGSSHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            35556678889999999999999999998   89999999999999999998874

>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0

Probab=92.95  E-value=0.15  Score=46.17  Aligned_cols=52  Identities=12%  Similarity=0.094  Sum_probs=46.3

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       205 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  256 (274)
T 3tlf_A          205 RAHEIADIVNSNAPLAVRGTRLAILKGLN---VPLHEAEILAETFRERVLRTEDA  256 (274)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            45556678899999999999999999998   89999999999999999988864

>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}

Probab=92.79  E-value=0.16  Score=45.69  Aligned_cols=51  Identities=8%  Similarity=0.150  Sum_probs=45.5

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       197 a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  247 (265)
T 3kqf_A          197 AIEIAEKIASNGPIAVRLAKEAISNGIQ---VDLHTGLQMEKQAYEGVIHTKDR  247 (265)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            4455677889999999999999999998   89999999999999999988874

>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}

Probab=92.77  E-value=0.17  Score=45.59  Aligned_cols=52  Identities=12%  Similarity=0.115  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       196 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~  247 (265)
T 3rsi_A          196 KARSLADRIVRNGPLAVRNAKEAIVRSGW---LAEEDARAIEARLTRPVITSADA  247 (265)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHHTT---CCHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            34556678899999999999999999998   89999999999999999988764

>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=92.55  E-value=0.17  Score=45.37  Aligned_cols=51  Identities=14%  Similarity=0.104  Sum_probs=45.8

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+++|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       190 a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  240 (258)
T 4fzw_A          190 ALQLASKMARHSPLALQAAKQALRQSQE---VALQAGLAQERQLFTLLAATEDR  240 (258)
T ss_dssp             HHHHHHHHTTSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            4456677889999999999999999999   89999999999999999988874

>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}

Probab=92.31  E-value=0.24  Score=44.47  Aligned_cols=52  Identities=8%  Similarity=0.010  Sum_probs=42.8

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.+
T Consensus       198 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~~  249 (263)
T 3l3s_A          198 VADLAGALAARNQAPLRRGLETLNRHLE---LPLEQAYALATPVMVEHFMDPGRR  249 (263)
T ss_dssp             HHHHHHHHHSSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhCCHHHH
Confidence            4455678889999999999999999998   899999999999999999999865

>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}

Probab=92.27  E-value=0.2  Score=44.99  Aligned_cols=51  Identities=12%  Similarity=0.011  Sum_probs=45.2

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.+++.++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       195 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  245 (263)
T 3moy_A          195 ALAVAQRIARMSRPAGRAVKDAINEAFE---RPLSAGMRYERDAFYAMFDTHDQ  245 (263)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHHTTT---SCHHHHHHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            3445577889999999999999999998   89999999999999999988874

>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}

Probab=91.78  E-value=0.15  Score=45.88  Aligned_cols=52  Identities=10%  Similarity=-0.003  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       196 ~a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  247 (265)
T 3qxi_A          196 AAIALAEKITANGPLAVAATKRIITESRG---WSLDTRFAQQMKILFPIFTSNDA  247 (265)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHHTT---CCTTTHHHHHHHHHHHHHHCHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            34556688899999999999999999998   89999999999999999988764

>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}

Probab=91.64  E-value=0.26  Score=44.61  Aligned_cols=52  Identities=6%  Similarity=-0.035  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       208 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~  259 (279)
T 3g64_A          208 AARTLARRLADGPALAHAQTKALLTAELD---MPLAAAVELDASTQALLMTGEDY  259 (279)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            34456678889999999999999999998   89999999999999999988764

>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*

Probab=91.37  E-value=0.3  Score=43.71  Aligned_cols=52  Identities=10%  Similarity=0.007  Sum_probs=45.4

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..   .+++++++.|...+..++.++|.
T Consensus       191 ~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  242 (260)
T 1mj3_A          191 EAIQCAEKIANNSKIIVAMAKESVNAAFE---MTLTEGNKLEKKLFYSTFATDDR  242 (260)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHHHHHHGGGS---SCHHHHHHHHHHHHHHGGGSHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            34456678889999999999999999988   89999999999999999888764

>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}

Probab=91.20  E-value=0.28  Score=43.73  Aligned_cols=51  Identities=10%  Similarity=0.010  Sum_probs=45.6

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+++|.++..++++++++..   .+++++++.|...+..++.++|.
T Consensus       186 a~~~a~~la~~~~~a~~~~K~~~~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  236 (254)
T 3hrx_A          186 ALSLAKELAQGPTRAYALTKKLLLETYR---LSLTEALALEAVLQGQAGQTQDH  236 (254)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHGGG---SCHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHhhccchHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            4455677899999999999999999999   89999999999999999988874

>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}

Probab=91.08  E-value=0.27  Score=43.90  Aligned_cols=51  Identities=12%  Similarity=0.044  Sum_probs=45.0

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       187 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  237 (255)
T 3p5m_A          187 LTDVLRSVSGGPTLAFGWTKRALAAATL---AELEPVQAIEAEGQLALVETADF  237 (255)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHHHC---TTHHHHHHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            3445577889999999999999999988   89999999999999999988774

>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}

Probab=90.41  E-value=0.38  Score=43.51  Aligned_cols=51  Identities=12%  Similarity=0.038  Sum_probs=45.2

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+++|.++..++++++++..   .+++++++.|...+..++.++|.
T Consensus       206 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  256 (274)
T 4fzw_C          206 AQQLARHLATQPTFGLGLIKQAINSAET---NTLDTQLDLERDYQRLAGRSADY  256 (274)
T ss_dssp             HHHHHHHHTTSCHHHHHHHHHHHHHHTS---SCHHHHHHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhhh---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            4455677889999999999999999999   89999999999999998888764

>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3

Probab=90.27  E-value=0.41  Score=42.63  Aligned_cols=51  Identities=8%  Similarity=-0.031  Sum_probs=44.3

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       188 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  238 (253)
T 1uiy_A          188 AKALAEEVAKNAPTSLRLTKELLLALPG---MGLEDGFRLAALANAWVRETGDL  238 (253)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHHGGG---SCHHHHHHHHHHHHHHGGGCHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            3345567788999999999999999988   89999999999999999888764

>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}

Probab=90.12  E-value=0.25  Score=44.29  Aligned_cols=50  Identities=16%  Similarity=0.183  Sum_probs=44.6

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       194 ~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  243 (261)
T 3pea_A          194 LKVAKQIAGKSPATARAVLELLQTTKS---SHYYEGVQREAQIFGEVFTSEDG  243 (261)
T ss_dssp             HHHHHHHHTSCHHHHHHHHHHHGGGCC---HHHHHHHHHHHHHHHHHHHSHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            345577889999999999999999998   89999999999999999988874

>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}

Probab=90.12  E-value=0.36  Score=43.93  Aligned_cols=50  Identities=2%  Similarity=-0.074  Sum_probs=44.2

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       214 ~~~a~~la~~~p~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  263 (286)
T 3myb_A          214 EAMVSKIVAKPRAAVAMGKALFYRQIE---TDIESAYADAGTTMACNMMDPSA  263 (286)
T ss_dssp             HHHHHHHHHSCHHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHHHHHSHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            344567788999999999999999988   89999999999999999988874

>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0

Probab=90.10  E-value=0.18  Score=45.39  Aligned_cols=53  Identities=8%  Similarity=-0.101  Sum_probs=46.8

Q ss_pred             HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          289 PWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       289 ~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       198 ~~a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~  250 (267)
T 3oc7_A          198 AAIDQLVTDVGRGSPQGLAASKALTTAAVL---ERFDRDAERLAEESARLFVSDEA  250 (267)
T ss_dssp             HHHHHHHHHHHTSCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            345666788899999999999999999988   79999999999999999988764

>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*

Probab=90.08  E-value=0.63  Score=41.81  Aligned_cols=49  Identities=18%  Similarity=0.081  Sum_probs=43.9

Q ss_pred             HHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          293 STLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       293 ~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       197 ~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  245 (269)
T 1nzy_A          197 KVARELAAAPTHLQVMAKERFHAGWM---QPVEECTEFEIQNVIASVTHPHF  245 (269)
T ss_dssp             HHHHHHHHSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHHSTTH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            44567788999999999999999988   89999999999999999988875

>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A

Probab=90.00  E-value=0.24  Score=44.72  Aligned_cols=52  Identities=12%  Similarity=0.131  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      ++.+..+.+..++|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       203 ~a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  254 (272)
T 1hzd_A          203 KALDLAREFLPQGPVAMRVAKLAINQGME---VDLVTGLAIEEACYAQTIPTKDR  254 (272)
T ss_dssp             HHHHHHHTTTTSCHHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHTTTTCHHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            34455567788999999999999999988   89999999999999998888764

>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}

Probab=89.99  E-value=0.23  Score=44.94  Aligned_cols=52  Identities=10%  Similarity=-0.042  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+++|.++..++++++++..   .+++++++.|...+..++.++|.
T Consensus       200 ~a~~~a~~ia~~~p~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  251 (275)
T 3hin_A          200 KALELGNRVAQNAPLTNFAVLQALPMIAE---ANPQTGLLMESLMATVAQSDQEA  251 (275)
T ss_dssp             HHHHHHHHHTTSCHHHHHHHHTHHHHHHH---SCHHHHHHHHHHHHHHHHHSHHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            45556678899999999999999999988   89999999999999999888774

>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A

Probab=89.90  E-value=0.14  Score=46.10  Aligned_cols=52  Identities=13%  Similarity=0.122  Sum_probs=45.5

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHH---HHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRS---IREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~---~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+++|.++..++++   ++++..   .+++++++.|.+.+..++.++|.
T Consensus       195 ~a~~~a~~la~~~p~a~~~~K~~~~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  249 (267)
T 3r9t_A          195 AALALASAITVNAPLSVQASKRIAYGVDDGVV---VGDEPGWDRTMREMRALLKSEDA  249 (267)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHTTEETTEE---GGGHHHHHHHHHHHHHHTTSSHH
T ss_pred             HHHHHHHHHHhCChHHHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            34556678899999999999999   888887   79999999999999999988874

>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A

Probab=89.46  E-value=0.56  Score=42.05  Aligned_cols=50  Identities=6%  Similarity=-0.154  Sum_probs=41.9

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.+++.++++++++..   .+++++++.|.+ +..++.+ |.
T Consensus       195 ~a~~~a~~la~~~~~a~~~~K~~~~~~~~---~~l~~~l~~e~~-~~~~~~s-d~  244 (262)
T 3r9q_A          195 AAETLAAEIAAFPQQCVRADRDSAIAQWG---MAEEAALDNEFG-SIERVAT-EA  244 (262)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHHHHHHHTTT---SCHHHHHHHHHT-HHHHHHC---
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHH-HHHHhcc-HH
Confidence            34456678889999999999999999998   899999999999 8777776 64

>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}

Probab=89.44  E-value=0.28  Score=44.11  Aligned_cols=50  Identities=12%  Similarity=0.161  Sum_probs=44.2

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       198 ~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~s~d~  247 (265)
T 3swx_A          198 IAIAQTIARQAPLGVQATLRNARLAVR---EGDAAAEEQLVPTVRELFTSEDA  247 (265)
T ss_dssp             HHHHHHHHHSCHHHHHHHHHHHHHHHH---HCHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            345577888999999999999999988   89999999999999999988764

>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}

Probab=89.33  E-value=0.24  Score=44.32  Aligned_cols=52  Identities=12%  Similarity=0.115  Sum_probs=22.2

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +.+..+.+.+.+|.++..++++++++..   .+++++++.|...+..++.++|.+
T Consensus       194 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~~  245 (256)
T 3qmj_A          194 ARRHAEILAAKPISSLMAVKHTMVEPNR---AQIAAASARENAHFAELMGAQANA  245 (256)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHCC-----------------------------
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCHHHH
Confidence            3445577889999999999999999988   899999999999999999998864

>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A

Probab=89.30  E-value=0.35  Score=43.67  Aligned_cols=50  Identities=8%  Similarity=-0.076  Sum_probs=43.5

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+..+.+.+++|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       205 ~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  254 (275)
T 1dci_A          205 FALAADISSKSPVAVQGSKINLIYSRD---HSVDESLDYMATWNMSMLQTQDI  254 (275)
T ss_dssp             HHHHHHHHHSCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHTSSHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            345577889999999999999999988   89999999999999888877753

>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}

Probab=89.09  E-value=0.61  Score=41.81  Aligned_cols=50  Identities=12%  Similarity=0.037  Sum_probs=43.9

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       198 ~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  247 (265)
T 2ppy_A          198 REYARKLANSATYAVSNIKLAIMNGKE---MPLNVAIRYEGELQNLLFRSEDA  247 (265)
T ss_dssp             HHHHHHHHTSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            345567888999999999999999998   89999999999999999888764

>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}

Probab=88.69  E-value=0.43  Score=42.57  Aligned_cols=50  Identities=10%  Similarity=-0.033  Sum_probs=43.8

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.+||.
T Consensus       190 ~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  239 (257)
T 2ej5_A          190 KQFAERLSAMPTKAIGLIKRLLRESEE---TTFDRYLEREAECQRIAGLTSDH  239 (257)
T ss_dssp             HHHHHHHHTSCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHSHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCChHH
Confidence            345567888999999999999999988   79999999999999999888764

>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}

Probab=88.57  E-value=0.6  Score=44.74  Aligned_cols=62  Identities=6%  Similarity=-0.044  Sum_probs=45.1

Q ss_pred             HHHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc-CcCCHHHHHHHH-hc-cCCCCCc
Q 018834          227 LGKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF-GLDTVEEIIDSL-ES-EASLIND  288 (350)
Q Consensus       227 l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f-~~~~~~ei~~~l-ek-~~~~~~~  288 (350)
                      +++++..+|.++..+|+.++........... .+......++ +.|..|++.+++ +| ++|+|..
T Consensus       311 a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGvrAflidKdr~P~w~~  376 (407)
T 3ju1_A          311 CATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAKGDFCEGVRALLIDKDKQPKWQF  376 (407)
T ss_dssp             HHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHSSHHHHHHHHTTSCCCCCCCSS
T ss_pred             HHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCcCCCCCC
Confidence            3577889999999999999886654443333 3466777777 567777788887 77 8887753

>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A

Probab=88.35  E-value=0.47  Score=42.39  Aligned_cols=50  Identities=14%  Similarity=0.077  Sum_probs=43.7

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       191 ~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  240 (258)
T 2pbp_A          191 MRLAGRLAEQPPLALRLIKEAVQKAVD---YPLYEGMQFERKNFYLLFASEDQ  240 (258)
T ss_dssp             HHHHHHHHTSCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            344567888999999999999999988   89999999999999999888764

>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A

Probab=88.21  E-value=0.52  Score=42.16  Aligned_cols=51  Identities=14%  Similarity=0.064  Sum_probs=44.4

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      .+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.+
T Consensus       197 ~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~s~d~~  247 (261)
T 2gtr_A          197 MVRIKELASCNPVVLEESKALVRCNMK---MELEQANERECEVLKKIWGSAQGM  247 (261)
T ss_dssp             HHHHHHHHTSCHHHHHHHHHHHHTTTH---HHHHHHHHHHHHHHHHHHHSTTTT
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHhccc---cCHHHHHHHHHHHHHHHhCCHHHH
Confidence            344567788999999999999999887   789999999999999999998864

>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}

Probab=88.09  E-value=0.29  Score=43.95  Aligned_cols=51  Identities=6%  Similarity=0.049  Sum_probs=45.0

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|-
T Consensus       197 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~  247 (263)
T 3lke_A          197 VKNYLKAVSEGYVPAIAATKKLLKGKAA---EELKQQLEQETEELVALFKQTEI  247 (263)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhhh---cCHHHHHHHHHHHHHHHhcCHHH
Confidence            4445678889999999999999999888   78999999999999999988874

>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*

Probab=88.07  E-value=0.29  Score=43.57  Aligned_cols=52  Identities=2%  Similarity=-0.044  Sum_probs=38.0

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.+
T Consensus       188 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~~  239 (250)
T 2a7k_A          188 AITQAHVMASYPASAFINTKRAVNKPFI---HLLEQTRDASKAVHKAAFQARDAQ  239 (250)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCC---------
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhhh---cCHHHHHHHHHHHHHHHhCCHHHH
Confidence            3445577888999999999999999887   789999999999999999988864

>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}

Probab=88.07  E-value=0.68  Score=42.08  Aligned_cols=49  Identities=10%  Similarity=0.054  Sum_probs=43.4

Q ss_pred             HHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          293 STLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       293 ~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       222 ~~a~~la~~~p~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  270 (287)
T 2vx2_A          222 RIARKIASLSRPVVSLGKATFYKQLP---QDLGTAYYLTSQAMVDNLALRDG  270 (287)
T ss_dssp             HHHHHHHTSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            44567788999999999999999988   89999999999999999888764

>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}

Probab=88.03  E-value=0.63  Score=42.11  Aligned_cols=48  Identities=13%  Similarity=-0.002  Sum_probs=42.6

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhcc
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRH  342 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~  342 (350)
                      .+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++
T Consensus       211 ~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~  258 (277)
T 4di1_A          211 VAWARRYLECPPRALAAAKAVINDVFE---LEATERAAAERRRYVELFAAG  258 (277)
T ss_dssp             HHHHHTTTTSCHHHHHHHHHHHHHTTT---SCHHHHHHHHHHHHHHTTSGG
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhcCc
Confidence            344566788999999999999999998   899999999999999998876

>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0

Probab=87.47  E-value=0.28  Score=44.14  Aligned_cols=51  Identities=10%  Similarity=0.064  Sum_probs=44.8

Q ss_pred             HHHHHHHHHhc-CcHHHHHHHHHHHhhCCCCCCCHHHH--HHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEA-SPLSLKVSLRSIREGGSGTNGGQGHC--TKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~-sP~sl~~t~~~~~~~~~~~~~~~~e~--l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.++ +|.++..++++++++..   .+++++  ++.|...+..++.+||.
T Consensus       193 a~~~a~~la~~~~p~a~~~~K~~l~~~~~---~~l~~~~~l~~e~~~~~~~~~s~d~  246 (265)
T 3qxz_A          193 ALRMAHDIATNVAPESAALTKRLLWDAQM---TGMSAAEVAARETADHLRLMGSQDA  246 (265)
T ss_dssp             HHHHHHHHHHHSCHHHHHHHHHHHHHHHH---HTCCHHHHHHHHHHHHHHHHTSTHH
T ss_pred             HHHHHHHHHccCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHHHhCChHH
Confidence            44566778888 99999999999999988   789999  99999999999998874

>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}

Probab=87.26  E-value=1.1  Score=42.01  Aligned_cols=61  Identities=15%  Similarity=0.131  Sum_probs=42.3

Q ss_pred             HHHhccCCHHHHHHHHHHHhccCCC-Ccc-hHHHHHHHHHHhcC-cCCHHHHHHHH--hccCCCCC
Q 018834          227 LGKLVTDDPSVIEACLEKYSDLVYP-DKN-SVIHRIDIVDKCFG-LDTVEEIIDSL--ESEASLIN  287 (350)
Q Consensus       227 l~~l~~~~~~~i~~~~~~~~~~~~~-~~~-~~~~~~~~i~~~f~-~~~~~ei~~~l--ek~~~~~~  287 (350)
                      +..++..+|.++..+|+.++..... ... .+..+......++. .|..|++.++|  ||++|+|.
T Consensus       258 a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~w~  323 (353)
T 4hdt_A          258 ADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPKWR  323 (353)
T ss_dssp             HHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCCCS
T ss_pred             HHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCCCC
Confidence            4567889999999999999876542 233 33345777888884 57777788888  99999875

>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*

Probab=87.15  E-value=3.6  Score=42.56  Aligned_cols=94  Identities=13%  Similarity=0.081  Sum_probs=64.6

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      ..++.+-.....+.++.++. .++-+|.|.-. .+|..|.+-             ......+..-++++++.++..|+|+
T Consensus       462 G~l~~~~a~KaarfI~~cd~-f~iPlv~LvDt-pGf~~G~~a-------------E~~Gi~~~gAkll~A~a~a~VP~it  526 (793)
T 2x24_A          462 QVWFPDSAYKTAQAIKDFNR-EKLPLMIFANW-RGFSGGMKD-------------MYDQVLKFGAYIVDGLRKYRQPVLI  526 (793)
T ss_dssp             TEECHHHHHHHHHHHHHHHT-TTCCEEEECCB-CEECCSHHH-------------HHTTHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CcccHHHHHHHHHHHHHhcc-CCCCEEEEecC-CCCCCCHHH-------------HHhhHHHHHHHHHHHHHhcCCCEEE
Confidence            47999999999999999975 46777776533 556666321             1223445566788889999999999


Q ss_pred             EE--CCcccccccccc---cccCE--EEEeCCeeEe
Q 018834          136 IL--NGVTMGGGAGVS---IPGTF--RVACGKTVFA  164 (350)
Q Consensus       136 ~i--~G~~~GgG~~La---l~~D~--riate~a~f~  164 (350)
                      +|  .|-+.||++.+.   +..|+  ++|.+++.++
T Consensus       527 vI~r~Ge~~GGa~~~~~~~~~~d~~ev~Awp~A~~~  562 (793)
T 2x24_A          527 YIPPYAEVRGGSWAVMDTSINPLCIEMYADRESRAS  562 (793)
T ss_dssp             EECTTCEEEHHHHHTTCGGGSTTTEEEEEETTCEEE
T ss_pred             EEecCCcccchhHHhhhcccCccHHHHhhhccCEEE
Confidence            99  898877655332   34555  4555555544

>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A

Probab=86.63  E-value=0.29  Score=50.17  Aligned_cols=70  Identities=14%  Similarity=0.157  Sum_probs=49.9

Q ss_pred             CCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCC--CHHHH-
Q 018834          129 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKL--NGAEM-  205 (350)
Q Consensus       129 ~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l--~a~eA-  205 (350)
                      -..|+|+++.|.|.|||..+...||++|+++++.       +++   .|          ..... ..||+.+  +.++. 
T Consensus       245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~-------ifl---tG----------P~vIk-~~tGeeV~~s~eeLG  303 (758)
T 3k8x_A          245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQP-------IIL---TG----------APAIN-KMLGREVYTSNLQLG  303 (758)
T ss_dssp             TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCC-------EES---SC----------HHHHH-HHHTSCCCSCTHHHH
T ss_pred             cCCCEEEEEccCCchHHHHHHhhCCEEEEECCce-------EEE---eC----------HHHHH-HHhCCccccCchhcc
Confidence            4679999999999999999999999999999863       333   11          11111 2367766  44432 


Q ss_pred             -----HHCCCCccccCCCC
Q 018834          206 -----MACGLATHYSVSEK  219 (350)
Q Consensus       206 -----~~~GLv~~vv~~~~  219 (350)
                           ...|.+|+++++|.
T Consensus       304 GA~vh~~sGvad~va~dd~  322 (758)
T 3k8x_A          304 GTQIMYNNGVSHLTAVDDL  322 (758)
T ss_dssp             SHHHHTTTTSSSEEESSHH
T ss_pred             hhhHHHhcCCeeEEecCHH
Confidence                 36899999887653

>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A

Probab=86.48  E-value=3.9  Score=41.96  Aligned_cols=109  Identities=14%  Similarity=0.162  Sum_probs=73.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      ..++.+......+.++.++.-.++-+|.|.-. .+|..|.+-.             .....+..-++++++.++..|+|+
T Consensus       447 G~l~pe~a~KaArfI~lcd~~f~iPLv~LvDt-pGf~~G~~aE-------------~~Gi~k~gAkll~A~a~a~VP~it  512 (758)
T 3k8x_A          447 QVWHPNSAFKTAQAINDFNNGEQLPMMILANW-RGFSGGQRDM-------------FNEVLKYGSFIVDALVDYKQPIII  512 (758)
T ss_dssp             TEECHHHHHHHHHHHHHHHHTSCCCEEECCCC-CEECCSHHHH-------------HTTHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CCCCHHHHHHHHHHHHHhhhccCCCEEEEecC-CCCCCCHHHH-------------HccHHHHHHHHHHHHHhCCCCEEE
Confidence            57899999999999999887456777766433 5677664321             123345566788889999999999


Q ss_pred             EEC--Ccccccccccccc----cCEEEEeCCeeEecccccccccCCCchHHHHhh
Q 018834          136 ILN--GVTMGGGAGVSIP----GTFRVACGKTVFATPETLIGFHPDAGASFYLSH  184 (350)
Q Consensus       136 ~i~--G~~~GgG~~Lal~----~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~r  184 (350)
                      .|=  |-+.||++ ++++    +|+     .-.|+.|...+|..+.-|+.-.+-|
T Consensus       513 VI~RkGe~~GGA~-~am~~~~~ad~-----~~v~Awp~A~isVM~pEgaa~Il~r  561 (758)
T 3k8x_A          513 YIPPTGELRGGSW-VVVDPTINADQ-----MEMYADVNARAGVLEPQGMVGIKFR  561 (758)
T ss_dssp             EECTTCEEETHHH-HTTCGGGSTTT-----EEEEEETTCEEESSCHHHHHHHHSC
T ss_pred             EEecCCccchHHH-HHhCcccCCCH-----HHHhcCCCCEEEccCHHHHHHHHhc
Confidence            998  88888776 4554    444     0144455555566655666555544

>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3

Probab=86.13  E-value=0.49  Score=43.16  Aligned_cols=52  Identities=12%  Similarity=0.010  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..   .+++++++.|...+..++.++|.
T Consensus       213 ~a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  264 (291)
T 2fbm_A          213 EVMIQIKELASYNPIVLEECKALVRCNIK---LELEQANERECEVLRKIWSSAQG  264 (291)
T ss_dssp             HHHHHHHHHTTSCHHHHHHHHHHHHTTTH---HHHHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHhhhc---cCHHHHHHHHHHHHHHHhcCHHH
Confidence            34455677889999999999999999887   78999999999999999888764

>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0

Probab=86.11  E-value=0.72  Score=41.47  Aligned_cols=51  Identities=8%  Similarity=-0.001  Sum_probs=44.2

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHH-HHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGH-CTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e-~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+++|.++..++++++++..   .++++ .++.|.+.+..++.++|.
T Consensus       193 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~~e~~~~~~~~~s~d~  244 (268)
T 3i47_A          193 TLKYASQISNNAPEAVKNSKQLAQYVAN---KKIDEELVRYTASLIAHKRVSDEG  244 (268)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHHTT---CCCSHHHHHHHHHHHHHHHHSHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHhhhc---CChhHHHHHHHHHHHHHHhcCHHH
Confidence            4456678889999999999999999988   78888 789999999998888764

>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A

Probab=85.18  E-value=0.69  Score=40.89  Aligned_cols=51  Identities=10%  Similarity=-0.038  Sum_probs=44.2

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.+++.++++++++..   .+++++++.|...+..++.++|.
T Consensus       185 a~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~s~d~  235 (243)
T 2q35_A          185 AQQLGQKIAKSPRLSLVALKQHLSADIK---AKFPEAIKKELEIHQVTFNQPEI  235 (243)
T ss_dssp             HHHHHHHHTTSCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHSSTTH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHhhh---cCHHHHHHHHHHHHHHHhCCHHH
Confidence            3445577889999999999999999887   78999999999999999888874

>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}

Probab=85.06  E-value=0.82  Score=41.59  Aligned_cols=50  Identities=10%  Similarity=-0.013  Sum_probs=43.1

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.++..++++++++..    +++++++.|.+.+..++.++|.
T Consensus       199 a~~lA~~la~~~p~a~~~~K~~l~~~~~----~l~~~l~~e~~~~~~~~~s~d~  248 (289)
T 3h0u_A          199 VAGIAARMSGFPRDALIAAKSAINAISL----PAPAEVRADAALFQQLVRGEKV  248 (289)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHHHS----CCHHHHHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHhhcc----cHHHHHHHHHHHHHHHhCCHHH
Confidence            3445577889999999999999999875    6899999999999999988874

>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A

Probab=84.68  E-value=1.5  Score=40.23  Aligned_cols=49  Identities=10%  Similarity=0.024  Sum_probs=42.4

Q ss_pred             HHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          293 STLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       293 ~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +..+.+.+ +|.++..++++++.+..   .+++++++.|.+.+..++.++|.+
T Consensus       237 ~~a~~la~-~p~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~~  285 (305)
T 3m6n_A          237 QVIRESKR-TPHAWAAMQQVREMTTA---VPLEEMMRITEIWVDTAMQLGEKS  285 (305)
T ss_dssp             HHHHHHTT-CHHHHHHHHHHHHTTTC---CCHHHHHHHHHHHHHHHTTCCHHH
T ss_pred             HHHHHHhh-ChHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHHcCchHH
Confidence            34455654 89999999999999998   899999999999999999998753

>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A

Probab=84.29  E-value=0.8  Score=40.89  Aligned_cols=51  Identities=12%  Similarity=0.045  Sum_probs=42.8

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.+++.++++++++..   .+++++++.|.+.+...+..+++
T Consensus       187 a~~~a~~la~~~~~a~~~~K~~~~~~~~---~~~~~~l~~e~~~~~~~~~~~~~  237 (256)
T 3pe8_A          187 ARRVAASIVGNNQKAVRALLDSYHRIDA---LQTGGALWAEAEAARQWMRSTSG  237 (256)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhhcccc
Confidence            3445577889999999999999999988   89999999999999888776665

>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}

Probab=84.26  E-value=0.62  Score=41.84  Aligned_cols=52  Identities=17%  Similarity=0.077  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          289 PWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       289 ~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+.+..+.+.+.+|.++..++++++++.    .+++++++.|...+..++.++|.
T Consensus       190 ~~a~~~a~~la~~~~~a~~~~K~~l~~~~----~~l~~~l~~e~~~~~~~~~s~d~  241 (266)
T 3fdu_A          190 ATAQATAQHLTALPLASLKQTKALMKHDL----DQIIECIDHEAEIFMQRVQSPEM  241 (266)
T ss_dssp             HHHHHHHHHHHTSCHHHHHHHHHHHTTTH----HHHHHHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHhhh----ccHHHHHHHHHHHHHHHhCCHHH
Confidence            34566778889999999999999998864    37999999999999999988874

>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}

Probab=84.19  E-value=0.62  Score=42.10  Aligned_cols=51  Identities=6%  Similarity=-0.124  Sum_probs=44.6

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.++..++++++++..   .+++++++.|...+..++.++|.
T Consensus       215 a~~~A~~la~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  265 (276)
T 3rrv_A          215 AIACAKKILELPQQAVESTKRVLNIHLE---RAVLASLDYALSAESQSFVTEDF  265 (276)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhhh---cCHHHHHHHHHHHHHHHhCCHHH
Confidence            4455678889999999999999999888   78999999999999998888764

>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*

Probab=83.53  E-value=0.48  Score=48.96  Aligned_cols=36  Identities=11%  Similarity=0.089  Sum_probs=32.2

Q ss_pred             CCCcEEEEECCcccccccccccccCEEEEeCCeeEe
Q 018834          129 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA  164 (350)
Q Consensus       129 ~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~  164 (350)
                      ...|+|+++.|.|.|||..+...||++|+.+++.+.
T Consensus       258 ~~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~  293 (793)
T 2x24_A          258 DEIVTISMVSCRALGIGAYLVRLGQRVIQVENSHII  293 (793)
T ss_dssp             HHSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEE
T ss_pred             CCCCEEEEEecCCchHHHHHHhhCCeEEEeccccEE
Confidence            369999999999999999999999999999986543

>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}

Probab=83.46  E-value=0.77  Score=41.98  Aligned_cols=51  Identities=14%  Similarity=0.030  Sum_probs=23.7

Q ss_pred             HHHHHHHHhc-CcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          292 GSTLRLLKEA-SPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       292 ~~~l~~~~~~-sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      .+..+.+.++ +|.++..++++++++..   .++++.++.|...+..++.++|.+
T Consensus       226 ~~~A~~la~~~~p~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d~~  277 (298)
T 3qre_A          226 LEYAEDIARYCSPSSMAVIKRQVYGDAT---RDVVEATSHAEVLLREAMPRPDVI  277 (298)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHGGGG---C-----------------------
T ss_pred             HHHHHHHHccCCHHHHHHHHHHHHhhhc---CCHHHHHHHHHHHHHHHhCCHHHH
Confidence            3455677787 99999999999999998   899999999999999999888754

>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}

Probab=83.36  E-value=1.7  Score=39.37  Aligned_cols=52  Identities=12%  Similarity=-0.022  Sum_probs=43.8

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhh-hccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSV-RRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~-~~~~~  344 (350)
                      +.+..+.+.+.+|.++..++++++++...  .+++++++.|...+..++ .++|.
T Consensus       219 a~~~a~~la~~~~~a~~~~K~~l~~~~~~--~~l~~~l~~e~~~~~~~~~~s~d~  271 (290)
T 3sll_A          219 CYAIGERIAGFSRPGIELTKRTIWSGLDA--ASLESHMHQEGLGQLYVRLLTDNF  271 (290)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHHHHTC--SCHHHHHHHHHHHHHHHHHHCCHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHhhccc--CCHHHHHHHHHHHHHHHHhcCHHH
Confidence            44556778899999999999999988651  489999999999999998 88763

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*

Probab=81.78  E-value=0.56  Score=41.92  Aligned_cols=49  Identities=14%  Similarity=0.110  Sum_probs=42.3

Q ss_pred             HHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHh--hhhhccCC
Q 018834          293 STLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFG--TSVRRHGG  344 (350)
Q Consensus       293 ~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~--~~~~~~~~  344 (350)
                      +..+.+.+.+|.++..++++++++..   .+++++++.|.+.+.  .++.+||.
T Consensus       193 ~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~s~d~  243 (261)
T 1ef8_A          193 QMAHHISEKAPLAIAVIKEELRVLGE---AHTMNSDEFERIQGMRRAVYDSEDY  243 (261)
T ss_dssp             HHHHHHTTSCHHHHHHHHHHHHHHHH---CCCCCHHHHHHHHHHHHHHHTSHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHhhHHHhhcCHHH
Confidence            44567888999999999999999887   789999999999998  88877764

>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*

Probab=81.42  E-value=2.9  Score=37.54  Aligned_cols=49  Identities=14%  Similarity=0.082  Sum_probs=39.3

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhh--hhcc
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTS--VRRH  342 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~--~~~~  342 (350)
                      +.+..+.+.+.+|.++..++++++++..   .+++++++.|...+..+  +.++
T Consensus       201 a~~~a~~la~~~p~a~~~~K~~l~~~~~---~~~~~~~~~e~~~~~~~~~~~s~  251 (276)
T 2j5i_A          201 TIELARNLLEKNPVVLRAAKHGFKRCRE---LTWEQNEDYLYAKLDQSRLLDTE  251 (276)
T ss_dssp             HHHHHHHHHTSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhhcCCh
Confidence            3445677889999999999999999998   89999999998877665  3355

>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3

Probab=80.95  E-value=1.1  Score=40.49  Aligned_cols=51  Identities=14%  Similarity=0.110  Sum_probs=43.6

Q ss_pred             HHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          292 GSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       292 ~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      .+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.+||.+
T Consensus       217 ~~~a~~la~~~~~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~~  267 (280)
T 2f6q_A          217 WTRLKAFAKLPPNALRISKEVIRKRER---EKLHAVNAEECNVLQGRWLSDECT  267 (280)
T ss_dssp             HHHHHHHTTSCHHHHHHHHHHHHGGGH---HHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHhhhh---cCHHHHHHHHHHHHHHHhCCHHHH
Confidence            344567788899999999999999887   789999999999999999888753

>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}

Probab=80.61  E-value=2.8  Score=37.55  Aligned_cols=51  Identities=6%  Similarity=-0.096  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      .+.+..+.+.+.+|.++..++++++++..    ++++.++.|.+.+..++.++|.
T Consensus       191 ~~~~~a~~la~~~p~a~~~~K~~l~~~~~----~~~~~~~~e~~~~~~~~~s~d~  241 (267)
T 3hp0_A          191 LLRKHLLRLRRLNKKGIAHYKQFMSSLDH----QVSRAKATALTANQDMFSDPQN  241 (267)
T ss_dssp             HHHHHHHHHTTSCHHHHHHHHHHHHHHCC----HHHHHHHHHHHHHHHHTTSTTH
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHhccc----chHHHHHHHHHHHHHHhCCHHH
Confidence            44556688899999999999999999865    5889999999999999998884

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	350
d1mj3a_	260	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat	4e-28
d1uiya_	253	c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {The	5e-19
d1dcia_	275	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	2e-15
d1hzda_	266	c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [T	2e-14
d2f6qa1	245	c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-C	1e-13
d1q52a_	297	c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacter	3e-12
d1pjha_	266	c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2	3e-11
d1nzya_	269	c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Ps	3e-10
d1wdka4	310	c.14.1.3 (A:1-310) Fatty oxidation complex alpha s	6e-09
d2fw2a1	258	c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Hum	2e-07
d1sg4a1	249	c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-d	3e-07
d2a7ka1	230	c.14.1.3 (A:1-230) Carbapenem biosynthes protein C	6e-06
d1szoa_	249	c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus	1e-05
d1wz8a1	263	c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TT	3e-05
d1ef8a_	261	c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Esc	2e-04

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 260

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  108 bits (270), Expect = 4e-28
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 7/162 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP ALNAL   +  +LN+  + +E DP +G + + G  +AF AG DI  + +      
Sbjct: 22  LNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRT---- 77

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
                 +     S    +    KP +A +NG  +GGG  +++      A  K  F  PE 
Sbjct: 78  --FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEI 135

Query: 169 LIGFHPDAGASFYLSHLPGH-LGEFLALTGAKLNGAEMMACG 209
           L+G  P AG +  L+   G  L   + LTG +++  +    G
Sbjct: 136 LLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAG 177

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]} Length = 253

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

 Score = 83.2 bits (204), Expect = 5e-19
 Identities = 47/167 (28%), Positives = 68/167 (40%), Gaps = 1/167 (0%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
            LN P   N L+  M   L +     E DP +  V + G G+AF AG D+  L      G
Sbjct: 13  FLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELG 72

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
             EE      +L    + + T+ KP VA +NG  + GGAG+++     V   +      E
Sbjct: 73  A-EENYRHSLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTE 131

Query: 168 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214
             IGF     +   +  +     + L LTG  +   E  A GL    
Sbjct: 132 VKIGFVAALVSVILVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRI 178

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 275

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.2 bits (178), Expect = 2e-15
 Identities = 33/147 (22%), Positives = 57/147 (38%), Gaps = 7/147 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           LNRP   NA+N     +L + F+    D +   V + G+G+ F +G D++ +   + Q  
Sbjct: 19  LNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPP 78

Query: 109 L-------EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
                      +D          ++    KP +A ++G  +GGG  +      R      
Sbjct: 79  GDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDA 138

Query: 162 VFATPETLIGFHPDAGASFYLSHLPGH 188
            F   E  +G   D G    L  + G+
Sbjct: 139 FFQVKEVDVGLAADVGTLQRLPKVIGN 165

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.2 bits (170), Expect = 2e-14
 Identities = 29/170 (17%), Positives = 61/170 (35%), Gaps = 3/170 (1%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           +NR    N+L+ N+   L+K   A ++D  +  + ++         G          +  
Sbjct: 21  INRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGAD---LKERAKMS 77

Query: 109 LEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPET 168
             E   F   + + I  +     P +A ++G+ +GGG  +++    RVA         ET
Sbjct: 78  SSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVET 137

Query: 169 LIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHYSVSE 218
            +   P  G +  L    G       +  A++   +         + + +
Sbjct: 138 KLAIIPGGGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQ 187

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (164), Expect = 1e-13
 Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 1/137 (0%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
           + NRP   NA+NT M  ++ +  KA   D +I  V + G+G  + +G D+ +       G
Sbjct: 17  MFNRPKKKNAINTEMYHEIMRALKAASKDDSIITV-LTGNGDYYSSGNDLTNFTDIPPGG 75

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
             E+ K+    L  F+       KP +A++NG  +G    +        A  +  F TP 
Sbjct: 76  VEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPF 135

Query: 168 TLIGFHPDAGASFYLSH 184
           + +G  P+  +S+    
Sbjct: 136 SHLGQSPEGCSSYTFPK 152

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]} Length = 297

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 64.4 bits (155), Expect = 3e-12
 Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 14/109 (12%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN--- 105
            NRP   NA   +   +L ++       P++G V + G+G +   GG             
Sbjct: 35  FNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRG 94

Query: 106 -----------QGKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMG 143
                         ++  +     +     L+    K  + ++NG   G
Sbjct: 95  RSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAG 143

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 266

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.8 bits (146), Expect = 3e-11
 Identities = 28/181 (15%), Positives = 49/181 (27%), Gaps = 9/181 (4%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK 108
           L  P  LNAL       L +L +  + + ++ F  ++ SGR F +G D   +        
Sbjct: 20  LINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDT 79

Query: 109 LEECK-------DFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKT 161
            +          +F             H K  +  LNG  +G  A +        +    
Sbjct: 80  NKYPSETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDK 139

Query: 162 VFATPETLIGFHPDAGASFYLSHL--PGHLGEFLALTGAKLNGAEMMACGLATHYSVSEK 219
           V+             G +     L    +      +         M   G  +       
Sbjct: 140 VYLLYPFANLGLITEGGTTVSLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPS 199

Query: 220 L 220
            
Sbjct: 200 S 200

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]} Length = 269

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

 Score = 57.9 bits (138), Expect = 3e-10
 Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 1/141 (0%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-QG 107
           +  P   NAL+     ++       E D ++G V + G+  AFCAG  +  +       G
Sbjct: 18  IKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAG 77

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
             +  +      +  I+ +    +P +A +NGV  GGG G+S+     +      F    
Sbjct: 78  VRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAW 137

Query: 168 TLIGFHPDAGASFYLSHLPGH 188
             IG   D   S+ L+ + G 
Sbjct: 138 HTIGIGNDTATSYSLARIVGM 158

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]} Length = 310

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

 Score = 54.3 bits (129), Expect = 6e-09
 Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 1/135 (0%)

Query: 50  NRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL 109
            +  ++N  N     +L +   A + D ++  V +      F  G DI            
Sbjct: 24  LKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKLPDA 83

Query: 110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETL 169
           E                     P VA +NG+ +GGG  + +   FRV         PE  
Sbjct: 84  ELI-AGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVK 142

Query: 170 IGFHPDAGASFYLSH 184
           +G +P  G +  L  
Sbjct: 143 LGIYPGFGGTVRLPR 157

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.1 bits (115), Expect = 2e-07
 Identities = 33/167 (19%), Positives = 52/167 (31%), Gaps = 1/167 (0%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
           +  R +  NALNT +  ++     +   D +   +         C       + H  N  
Sbjct: 17  LSTRSTEKNALNTEVIKEMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDR 76

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPE 167
                 +   T+ +F+       KP V  +NG  +G GA +        A  K  F TP 
Sbjct: 77  N-TASLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPY 135

Query: 168 TLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGAEMMACGLATHY 214
           T  G  PD  +S     + G       L   +   A           
Sbjct: 136 TTFGQSPDGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQ 182

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 249

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score = 48.7 bits (114), Expect = 3e-07
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 3/88 (3%)

Query: 35  QVLVEGKANSRMAI--LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFC 92
           +VLVE  A + +A+     P  +N+L+     +L    +  END +   V +        
Sbjct: 3   RVLVEPDAGAGVAVMKFKNP-PVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVF 61

Query: 93  AGGDIVSLYHFMNQGKLEECKDFFRTLY 120
           + G  ++     +           + L+
Sbjct: 62  SAGLDLTEMCGRSPAHYAGYWKAVQELW 89

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]} Length = 230

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

 Score = 44.4 bits (103), Expect = 6e-06
 Identities = 7/58 (12%), Positives = 20/58 (34%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 106
           L+ P+  N  +  +   +         D ++  V + G      + G   +    +++
Sbjct: 15  LDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSR 72

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]} Length = 249

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 13/82 (15%), Positives = 24/82 (29%)

Query: 36  VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGG 95
           + +E      +  ++         +    +L   F     D     V + G+G +FC   
Sbjct: 15  IRLERDGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEI 74

Query: 96  DIVSLYHFMNQGKLEECKDFFR 117
           D  S          E   +  R
Sbjct: 75  DFTSFNLGTPHDWDEIIFEGQR 96

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]} Length = 263

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

 Score = 42.9 bits (99), Expect = 3e-05
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 2/97 (2%)

Query: 48  ILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG 107
           I  R   LNA+   +   L ++++  E    +  V ++G G  F AGG    +       
Sbjct: 23  ITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEMRASH 82

Query: 108 KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGG 144
           +       F      +       +P VA +  V +G 
Sbjct: 83  E--ALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGA 117

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]} Length = 261

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 9/58 (15%), Positives = 15/58 (25%)

Query: 49  LNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQ 106
            N    LNAL+      L +             +    SG    + G  +       +
Sbjct: 19  FNYGRKLNALSKVFIDDLMQALSDLNRPEIRCIILRAPSGSKVFSAGHDIHELPSGGR 76

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	350
d2fw2a1	258	Chromodomain protein CDY2A {Human (Homo sapiens) [	100.0
d1mj3a_	260	Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve	100.0
d1wz8a1	263	Probable enoyl-CoA hydratase TTHA0218 {Thermus the	100.0
d1nzya_	269	4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp.,	100.0
d1wdka4	310	Fatty oxidation complex alpha subunit, N-terminal	100.0
d2f6qa1	245	Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (	100.0
d1uiya_	253	Enoyl-CoA hydratase (crotonase) {Thermus thermophi	100.0
d1ef8a_	261	Methylmalonyl CoA decarboxylase {Escherichia coli	100.0
d1dcia_	275	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	100.0
d1hzda_	266	AUH protein {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1q52a_	297	Naphthoate synthase MenB {Mycobacterium tuberculos	100.0
d2a7ka1	230	Carbapenem biosynthes protein CarB {Pectobacterium	100.0
d1pjha_	266	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	100.0
d1sg4a1	249	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	100.0
d1szoa_	249	6-oxo camphor hydrolase {Rhodococcus erythropolis	100.0
d2f6ia1	190	Clp protease, ClpP subunit {Plasmodium falciparum	98.15
d1yg6a1	183	Clp protease, ClpP subunit {Escherichia coli [TaxI	98.06
d2cbya1	179	Clp protease, ClpP subunit {Mycobacterium tubercul	98.0
d1y7oa1	192	Clp protease, ClpP subunit {Streptococcus pneumoni	97.89
d1tg6a1	193	Clp protease, ClpP subunit {Human (Homo sapiens),	97.72
d1on3a1	253	Methylmalonyl-CoA carboxyltransferase (transcarbox	97.24
d2a7sa1	258	Propionyl-CoA carboxylase complex B subunit, PccB	97.14
d2f9ya1	316	Acetyl-coenzyme A carboxylase carboxyl transferase	97.13
d2f9yb1	263	Acetyl-coenzyme A carboxylase carboxyl transferase	97.13
d1xnya1	258	Propionyl-CoA carboxylase complex B subunit, PccB	97.12
d1vrga1	251	Propionyl-CoA carboxylase complex B subunit, PccB	97.1
d1pixa2	287	Glutaconyl-CoA decarboxylase A subunit {Acidaminoc	96.91
d1vrga2	264	Propionyl-CoA carboxylase complex B subunit, PccB	96.29
d1on3a2	264	Methylmalonyl-CoA carboxyltransferase (transcarbox	96.04
d2a7sa2	271	Propionyl-CoA carboxylase complex B subunit, PccB	96.0
d1xnya2	263	Propionyl-CoA carboxylase complex B subunit, PccB	95.92
d1pixa3	299	Glutaconyl-CoA decarboxylase A subunit {Acidaminoc	94.83
d1dcia_	275	Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA iso	92.17
d1hzda_	266	AUH protein {Human (Homo sapiens) [TaxId: 9606]}	91.75
d1nzya_	269	4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp.,	91.07
d1uiya_	253	Enoyl-CoA hydratase (crotonase) {Thermus thermophi	90.67
d1uyra1	333	Acetyl-coenzyme A carboxylase {Baker's yeast (Sacc	90.39
d1mj3a_	260	Enoyl-CoA hydratase (crotonase) {Rat (Rattus norve	89.7
d2fw2a1	258	Chromodomain protein CDY2A {Human (Homo sapiens) [	88.39
d1wz8a1	263	Probable enoyl-CoA hydratase TTHA0218 {Thermus the	80.14

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-52  Score=378.66  Aligned_cols=253  Identities=20%  Similarity=0.293  Sum_probs=222.1

Q ss_pred             CCcEEEEEeCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEGKANSRMAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLn-rp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.|.+++++++++|||| ||+++|++|.+|+.+|.++++.++.| ++++|||+|.|+.||+|+|++++...........
T Consensus         1 y~~i~v~~~~gi~~i~l~~rp~~~Nals~~~~~el~~al~~~~~d-~~~~vvl~g~g~~FsaG~Dl~~~~~~~~~~~~~~   79 (258)
T d2fw2a1           1 YRDIVVKKEDGFTQIVLSTRSTEKNALNTEVIKEMVNALNSAAAD-DSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTA   79 (258)
T ss_dssp             CCSEEEEEETTEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHS-SCSEEEEEECSSCSBCCBCHHHHHHHHHHCHHHH
T ss_pred             CceEEEEEECCEEEEEECCCCcccCCCCHHHHHHHHHHHHHHHcC-CCEEEEEecCccccccccccchhhhcccccccch
Confidence            467999999999999997 79999999999999999999999987 4699999999999999999999976654444455


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ..++....++++..|.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. +
T Consensus        80 ~~~~~~~~~~~~~~i~~~~kP~Iaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~ig~~~a  159 (258)
T d2fw2a1          80 SLEMVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGKASA  159 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCHHHH
T ss_pred             hhHHHHHHHHHHHhhhccceeeeeecccccccccccccccccccceecccceeeccccccccccccccccchhhcCcccc
Confidence            567788889999999999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHHHHHHHHhc-
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHRIDIVDKCF-  267 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~i~~~f-  267 (350)
                      .+|++||++++|+||+++||||+++|++++.+. .+.+.+++..++.+++..|+.++......... ...+.+.+.++| 
T Consensus       160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~i~~~~~~a~~~~K~~~~~~~~~~l~~~~~~e~~~~~~~~~  239 (258)
T d2fw2a1         160 NEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKALVRCNIKLELEQANERECEVLRKIWS  239 (258)
T ss_dssp             HHHHTTCCEEEHHHHHHTTSCSEEECSTTHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chhhccCcccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999998764 44557888999999999999888654322222 223456777888 


Q ss_pred             CcCCHHHHHHHHhccCCCC
Q 018834          268 GLDTVEEIIDSLESEASLI  286 (350)
Q Consensus       268 ~~~~~~ei~~~lek~~~~~  286 (350)
                      +.+..|++.+++||++|+|
T Consensus       240 s~d~~Egi~af~EKR~p~f  258 (258)
T d2fw2a1         240 SAQGIESMLKYVENKIDEF  258 (258)
T ss_dssp             SHHHHHHHHHHHHSSCCCC
T ss_pred             CHHHHHHHHHHhCCCCCCC
Confidence            5677888889999998865

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.8e-52  Score=380.08  Aligned_cols=250  Identities=24%  Similarity=0.326  Sum_probs=218.0

Q ss_pred             CCcEEEEEe---CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCCh
Q 018834           33 CNQVLVEGK---ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKL  109 (350)
Q Consensus        33 ~~~v~~~~~---~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~  109 (350)
                      ++.|+++++   ++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||+|.|+.||+|+|++++...    . 
T Consensus         3 ~~~i~~e~~g~~~~I~~itlnrP~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~----~-   77 (260)
T d1mj3a_           3 FQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNR----T-   77 (260)
T ss_dssp             CSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTC----C-
T ss_pred             CeEEEEEEEcCCCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCcceEEEecccccccccchhhhhhcc----c-
Confidence            678999987   48999999999999999999999999999999999999999999999999999999987532    1 


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH
Q 018834          110 EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       110 ~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                       ....+......++..+.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|..
T Consensus        78 -~~~~~~~~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~ig~~  156 (260)
T d1mj3a_          78 -FQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKS  156 (260)
T ss_dssp             -HHHHHHC--CCGGGGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHH
T ss_pred             -hhhhhHHHHHHHHHHhccCCCeEEEEEcCeEeHHHHHHHHHCCEEEEcCCCEEECchhccCcCCcccHHHHHHHHhCHH
Confidence             1233445566677889999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHh
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKC  266 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~  266 (350)
                       +++|++||++++|+||+++|||+++++++++.+.... +.+++..++.++..+|+.++.......... ..+.+.+..+
T Consensus       157 ~a~~l~l~g~~~~a~eA~~~Glv~~v~~~~~~~~~a~~~a~~i~~~~~~a~~~~K~~l~~~~~~~l~~~l~~E~~~~~~~  236 (260)
T d1mj3a_         157 LAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVAMAKESVNAAFEMTLTEGNKLEKKLFYST  236 (260)
T ss_dssp             HHHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHHHHHHHHHHGGGSSCHHHHHHHHHHHHHHG
T ss_pred             HHHHHHHcCcccCchhhccCCCceeeecccccccccccccccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence             9999999999999999999999999999998765444 468889999999999999988765443333 3356677777


Q ss_pred             c-CcCCHHHHHHHHhccCCCCCc
Q 018834          267 F-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       267 f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      + +.+..|.+.+|++|++|+|.+
T Consensus       237 ~~s~d~~egi~aFleKR~P~f~~  259 (260)
T d1mj3a_         237 FATDDRREGMSAFVEKRKANFKD  259 (260)
T ss_dssp             GGSHHHHHHHHHHHTTSCCCCCC
T ss_pred             hCCHHHHHHHHHHhCCCCCCCCC
Confidence            8 567788888899999998854

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-51  Score=376.94  Aligned_cols=252  Identities=16%  Similarity=0.173  Sum_probs=221.9

Q ss_pred             CCcEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           33 CNQVLVEG-KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        33 ~~~v~~~~-~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      ++.+.++. ++||++||| ||+++|++|.+|+.+|.++++.++.|++||+|||+|.|++||+|+|++++...  ....+.
T Consensus         8 ~~~i~~~~~~~gV~~itl-rp~~~Nal~~~m~~el~~~~~~~~~d~~vr~vvl~g~g~~FsaG~Dl~~~~~~--~~~~~~   84 (263)
T d1wz8a1           8 YPGLAFAWPRPGVLEITF-RGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEM--RASHEA   84 (263)
T ss_dssp             CTTEEEEEEETTEEEEEE-CCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHHHHHHH--HHCHHH
T ss_pred             CCeEEEEEcCCCEEEEEE-CCCCCCCCCHHHHHHHHHHHHHHhhCCCCeEEEEecccccccccchhhhhhhh--cccccc
Confidence            56788886 678999999 89999999999999999999999999999999999999999999999998754  223455


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ...++...++++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++|.. +
T Consensus        85 ~~~~~~~~~~~~~~i~~~~kPvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gl~p~~~~~~~l~~~~G~~~a  164 (263)
T d1wz8a1          85 LLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKA  164 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHH
T ss_pred             cccchhhhhHHHHHhhhhhcceeeeccccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence            667788888999999999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhc-C
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCF-G  268 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f-~  268 (350)
                      ++|++||++++|+||+++||||+|+|++++.+....+ .+++..++.++..+|+.++............+......+| +
T Consensus       165 ~~l~l~g~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~al~~~K~~l~~~~~~~~~~~~~e~~~~~~~~~s  244 (263)
T d1wz8a1         165 KYHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALHHTKHALNHWYRSFLPHFELSLALEFLGFSG  244 (263)
T ss_dssp             HHHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHGGGS
T ss_pred             hhhcccccccchhHHHhcCCcccccchhhhhHHHHHHHHHhhccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHccC
Confidence            9999999999999999999999999999988655544 6888999999999999887654433334444556666777 5


Q ss_pred             cCCHHHHHHHHhccCCCCC
Q 018834          269 LDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       269 ~~~~~ei~~~lek~~~~~~  287 (350)
                      .|..|++.+|+|||+|+|.
T Consensus       245 ~d~~Egi~Af~eKR~P~f~  263 (263)
T d1wz8a1         245 KELEEGLKALKEKRPPEFP  263 (263)
T ss_dssp             HHHHHHHHHHHTTSCCCCC
T ss_pred             HHHHHHHHHHhCCCCCCCC
Confidence            6777888889999998763

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

Probab=100.00  E-value=1.2e-50  Score=373.49  Aligned_cols=258  Identities=17%  Similarity=0.192  Sum_probs=221.9

Q ss_pred             CCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhh-cCChH
Q 018834           32 LCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMN-QGKLE  110 (350)
Q Consensus        32 ~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~-~~~~~  110 (350)
                      |++.|.++++++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++..... ....+
T Consensus         1 my~~i~~~i~dgVa~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~i~~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~~   80 (269)
T d1nzya_           1 MYEAIGHRVEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGVRD   80 (269)
T ss_dssp             CCSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHHHH
T ss_pred             CCCceEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCcccccchhhHHHHhhcccccchhh
Confidence            57889999999999999999999999999999999999999999999999999999999999999998743210 11122


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                      ....+....+.+..+|.++|||+||+|||+|+|||++|+++|||||++++++|++||.++|++|++|+++++++++|.. 
T Consensus        81 ~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a~~~~~~~~~g~~~~~g~~~~l~~~ig~~~  160 (269)
T d1nzya_          81 HFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVGMRR  160 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcchhehhhhhhcCCCceeeeecccHhhhhhhhhhcccccccccccccccccccccccChhh
Confidence            3334455567899999999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHH-HHHHHHHHhc
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVI-HRIDIVDKCF  267 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~i~~~f  267 (350)
                      ++++++||+.++|+||+++||||++++++++.+.+..+ .+++..++.++..+|+.++........... .+...+..+|
T Consensus       161 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~  240 (269)
T d1nzya_         161 AMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQVMAKERFHAGWMQPVEECTEFEIQNVIASV  240 (269)
T ss_dssp             HHHHHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHH
T ss_pred             hhhccccccccchhHHHHcCCccccccccccccchhhhhhhhhhhhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999998887654444 688889999999999999876554433333 3455566666


Q ss_pred             -CcCCHHHHHHHHhccCCCCCcH
Q 018834          268 -GLDTVEEIIDSLESEASLINDP  289 (350)
Q Consensus       268 -~~~~~~ei~~~lek~~~~~~~~  289 (350)
                       +.+..+.+.+++||++|+|.+.
T Consensus       241 ~~~~~~e~v~aflekrkp~~~~~  263 (269)
T d1nzya_         241 THPHFMPCLTRFLDGHRADRPQV  263 (269)
T ss_dssp             HSTTHHHHHHHHHTTCCTTCCSS
T ss_pred             cCHHHHHHHHHHHCCCCCCcCCC
Confidence             6677788888999999887643

>d1wdka4 c.14.1.3 (A:1-310) Fatty oxidation complex alpha subunit, N-terminal domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Fatty oxidation complex alpha subunit, N-terminal domain
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=4.9e-50  Score=376.27  Aligned_cols=282  Identities=16%  Similarity=0.221  Sum_probs=224.9

Q ss_pred             CcEEEEE-eCCEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHH
Q 018834           34 NQVLVEG-KANSRMAILN-RPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEE  111 (350)
Q Consensus        34 ~~v~~~~-~~~v~~ItLn-rp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~  111 (350)
                      +.+.+++ ++||++|+|| ||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++++.+.... ....
T Consensus         6 ~~i~~~~~~~gva~i~ln~~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~-~~~~   84 (310)
T d1wdka4           6 KAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSSGKDVFIVGADITEFVENFKL-PDAE   84 (310)
T ss_dssp             SSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSSBBCCCHHHHHHHTTS-CHHH
T ss_pred             ceEEEEEecCCEEEEEECCCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccchhhhhhhhhcccc-cchh
Confidence            4677775 7889999998 89999999999999999999999999999999999999999999999998765322 2233


Q ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-H
Q 018834          112 CKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-G  190 (350)
Q Consensus       112 ~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a  190 (350)
                      ........++++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|.. +
T Consensus        85 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~elal~cD~ria~~~a~f~~pe~~~Gl~P~~gg~~~L~r~iG~~~a  164 (310)
T d1wdka4          85 LIAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNA  164 (310)
T ss_dssp             HHHHHHHHHHHHHHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred             hhhhhhHHHHHHHHhhcCCccceeeccccccccccccchhhhhhhccccceecccccccCCCccccchhhhhhhhhhhhh
Confidence            344455677889999999999999999999999999999999999999999999999999999999999999999988 9


Q ss_pred             HHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCc
Q 018834          191 EFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGL  269 (350)
Q Consensus       191 ~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~  269 (350)
                      ++|++||++++|+||+++||||++||++++.+....+ .+++..+.......+.... ....                  
T Consensus       165 ~~lll~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~~~~~~~~~~~~~~~~~~-~~~~------------------  225 (310)
T d1wdka4         165 VEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLE-KLKL------------------  225 (310)
T ss_dssp             HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHHGGGGS-CCSC------------------
T ss_pred             hhhhccccccCHHHHhhccCccEEccHHHHHHHHHHHHHHHHhcccchhhhhhhhcc-cccc------------------
Confidence            9999999999999999999999999999988765555 4555444332221111111 1010                  


Q ss_pred             CCHHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCcccc
Q 018834          270 DTVEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGSLLF  348 (350)
Q Consensus       270 ~~~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~~~~  348 (350)
                      ...+..+.+ +        .+.....++...+.|...++ ++.++.+.+   .+++++|+.|.+.|.+++.+|+++.++
T Consensus       226 ~~~~~~~~~-~--------~~~~~~~~~~~~~~pA~~~~-l~~v~~~~~---~~~~~~L~~E~~~f~~l~~t~~a~~~i  291 (310)
T d1wdka4         226 NAIEQMMAF-E--------TAKGFVAGQAGPNYPAPVEA-IKTIQKAAN---FGRDKALEVEAAGFAKLAKTSASNCLI  291 (310)
T ss_dssp             CHHHHHHHH-H--------HHHHHHHHHHCTTCHHHHHH-HHHHHHHTT---CCHHHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             cchhhhHHH-H--------HhhhhhhhhccCCChHHHHH-HHHHHHHhC---CCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence            111111111 0        11222334445667766554 999999999   999999999999999999999987653

>d2f6qa1 c.14.1.3 (A:108-352) Peroxisomal 3,2-trans-enoyl-CoA isomerase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Peroxisomal 3,2-trans-enoyl-CoA isomerase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-50  Score=363.12  Aligned_cols=240  Identities=21%  Similarity=0.256  Sum_probs=204.3

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEEC  112 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~  112 (350)
                      ++.|+++++++|++||||||+++|+||.+|+.+|.++++.++.|+.+ +||++|.|++||+|+|++++.+..........
T Consensus         2 ~~~i~~~~~~gi~~Itlnrp~~~Nals~~~~~~l~~~l~~~~~d~~v-~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~   80 (245)
T d2f6qa1           2 FETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKA   80 (245)
T ss_dssp             CSSEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHHHH
T ss_pred             cceEEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCce-EEeecCCCccccCCccchhhhccccccccccc
Confidence            56899999999999999999999999999999999999999999887 89999999999999999998754322223344


Q ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HH
Q 018834          113 KDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GE  191 (350)
Q Consensus       113 ~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~  191 (350)
                      ..+....++++..|.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++
T Consensus        81 ~~~~~~~~~~~~~i~~~~kpvIa~v~G~a~GgG~~la~~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~g~~~a~  160 (245)
T d2f6qa1          81 KNNAVLLREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAKAT  160 (245)
T ss_dssp             HHHHHHHHHHHHHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHHHHH
T ss_pred             chhhhHHHHHHhhhhhcCCceEEEECCccccccccchhhhhhhhhhccCeEecccccCCCCccccchhhcccccccchhh
Confidence            55566677899999999999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             HHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHHHHhccCCHHHHHHHHHHHhccCCCCcchHHHHHHHHHHhcCcCC
Q 018834          192 FLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIHRIDIVDKCFGLDT  271 (350)
Q Consensus       192 ~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~f~~~~  271 (350)
                      ++++||++++|+||+++||||+|+|++++.+....+                                            
T Consensus       161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~--------------------------------------------  196 (245)
T d2f6qa1         161 EMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTR--------------------------------------------  196 (245)
T ss_dssp             HHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHH--------------------------------------------
T ss_pred             hhcccccccccccccccccccccCCcchHHHHHHHH--------------------------------------------
Confidence            999999999999999999999999998876433222                                            


Q ss_pred             HHHHHHHHhccCCCCCcHHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccC
Q 018834          272 VEEIIDSLESEASLINDPWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHG  343 (350)
Q Consensus       272 ~~ei~~~lek~~~~~~~~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~  343 (350)
                                             .+++.+.||.+++.++++++++..   .+++++++.|..++.+.+.++|
T Consensus       197 -----------------------a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~s~d  242 (245)
T d2f6qa1         197 -----------------------LKAFAKLPPNALRISKEVIRKRER---EKLHAVNAEECNVLQGRWLSDE  242 (245)
T ss_dssp             -----------------------HHHHTTSCHHHHHHHHHHHHGGGH---HHHHHHHHHHHHHHHHHHTSHH
T ss_pred             -----------------------HHHHHcCCHHHHHHHHHHHHhhhh---cCHHHHHHHHHHHHHHHhcCcc
Confidence                                   133456677777777777777776   6778888888888877777765

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.9e-50  Score=364.03  Aligned_cols=248  Identities=25%  Similarity=0.250  Sum_probs=215.7

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDF  115 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~  115 (350)
                      |.++ +|+|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+.||+|+|++.+.... .........+
T Consensus         2 v~ie-~G~va~Itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~v~~vvl~g~g~~f~aG~dl~~~~~~~-~~~~~~~~~~   79 (253)
T d1uiya_           2 VQVE-KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVT-ELGAEENYRH   79 (253)
T ss_dssp             EEEE-CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHT-TSCHHHHHHH
T ss_pred             EEEe-eCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEecccccccccchhHHhhhcc-ccCcccccch
Confidence            4455 3789999999999999999999999999999999999999999999999999999999887542 3344556677


Q ss_pred             HHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHh
Q 018834          116 FRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLA  194 (350)
Q Consensus       116 ~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~  194 (350)
                      +...+.+...|.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|. |++++|+|++|.. +++|+
T Consensus        80 ~~~~~~~~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~ria~~~a~~~~~e~~~g~~~~-~~~~~l~~~~g~~~a~~l~  158 (253)
T d1uiya_          80 SLSLMRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAA-LVSVILVRAVGEKAAKDLL  158 (253)
T ss_dssp             HHHHHHHHHHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCH-HHHHHHHHHSCHHHHHHHH
T ss_pred             hhhhhhhhhHHhcCCCCEEEEeCeEEehhhHHHHhhhhhhhhhhhhHHhhhhcccccccc-cchhhhhcccCHHHHHHHh
Confidence            778889999999999999999999999999999999999999999999999999998875 6788999999988 99999


Q ss_pred             hcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCCCcchH-HHHHHHHHHhc-CcCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYPDKNSV-IHRIDIVDKCF-GLDT  271 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~i~~~f-~~~~  271 (350)
                      |||++++|+||+++||||+|+|++++.+....+ .+++..++.++..+|+.++.......... ..+...+..++ +.|.
T Consensus       159 l~g~~~~a~eA~~~Glv~~v~~~~~~~~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~  238 (253)
T d1uiya_         159 LTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLRLTKELLLALPGMGLEDGFRLAALANAWVRETGDL  238 (253)
T ss_dssp             HHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHH
T ss_pred             hcCcCCCHHHHHHhCCCcccccccccchhHHHHHHhhcccchHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHH
Confidence            999999999999999999999999988655555 67888999999999999887654443333 33566677777 5677


Q ss_pred             HHHHHHHHhccCCCC
Q 018834          272 VEEIIDSLESEASLI  286 (350)
Q Consensus       272 ~~ei~~~lek~~~~~  286 (350)
                      .|++.+|+|||+|+|
T Consensus       239 ~egi~af~eKR~P~f  253 (253)
T d1uiya_         239 AEGIRAFFEKRPPRF  253 (253)
T ss_dssp             HHHHHHHHTTSCCCC
T ss_pred             HHHHHHHhCCCCCCC
Confidence            778889999998865

>d1ef8a_ c.14.1.3 (A:) Methylmalonyl CoA decarboxylase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Methylmalonyl CoA decarboxylase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-50  Score=367.51  Aligned_cols=250  Identities=17%  Similarity=0.186  Sum_probs=210.0

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcC--CCccccCCChhhHHHhhhcCChH
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS--GRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~--g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      +++|.++++|+|++||||||+++|+||.+|+.+|.++|++++. +++++|||+|.  |++||+|+|++++.....+    
T Consensus         3 ~~~i~~~~~~~v~~Itlnrp~~~Nal~~~~~~~l~~al~~~~~-~~~~~vVl~g~~g~~~F~aG~Dl~~~~~~~~~----   77 (261)
T d1ef8a_           3 YQYVNVVTINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNR-PEIRCIILRAPSGSKVFSAGHDIHELPSGGRD----   77 (261)
T ss_dssp             CSSEEEEEETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCS-TTCCEEEEECCTTCSEEECCSCSTTC-----C----
T ss_pred             CCEEEEEEECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhC-CCCEEEEEeccccchhhcccccccccccCCcc----
Confidence            4679999999999999999999999999999999999999984 57999999986  4899999999998653211    


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-  189 (350)
                       ...+....+.++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++++|++|.. 
T Consensus        78 -~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~~~~pe~~~Gl~~~~~~~~~l~r~~g~~~  156 (261)
T d1ef8a_          78 -PLSYDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHI  156 (261)
T ss_dssp             -TTCTTSHHHHHHHHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHHH
T ss_pred             -ccccccchhhhHHHHHhCchhhhhcccccccchhhhhhhhhhhhhhhHhHHHhhhhcccccccccccccccccccCccc
Confidence             112344566788899999999999999999999999999999999999999999999999999999999999999988 


Q ss_pred             HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHHH-HHhccCCHHHHHHHHHHHhccCCC--CcchHHH-HHHHHHH
Q 018834          190 GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEEL-GKLVTDDPSVIEACLEKYSDLVYP--DKNSVIH-RIDIVDK  265 (350)
Q Consensus       190 a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~--~~~~~~~-~~~~i~~  265 (350)
                      ++++++||+.++|+||+++||||++++++++.+.+..+ .+++..+|.++...|+.++.....  ......+ .......
T Consensus       157 a~~~~l~g~~~~a~eA~~~Glv~~vv~~~~~~~~a~~~a~~la~~~~~a~~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~  236 (261)
T d1ef8a_         157 VKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGEAHTMNSDEFERIQGMRRA  236 (261)
T ss_dssp             HHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_pred             cccccccCceEcHHHHHHcCCcceeeechhhhhhhHHHHHHHHhcCcHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHH
Confidence            99999999999999999999999999998887655444 678889999999999988754321  1222222 2445666


Q ss_pred             hc-CcCCHHHHHHHHhccCCCCCc
Q 018834          266 CF-GLDTVEEIIDSLESEASLIND  288 (350)
Q Consensus       266 ~f-~~~~~~ei~~~lek~~~~~~~  288 (350)
                      +| +.|..|++.+|+|||+|+|.+
T Consensus       237 ~~~s~D~~Egi~AfleKR~P~f~G  260 (261)
T d1ef8a_         237 VYDSEDYQEGMNAFLEKRKPNFVG  260 (261)
T ss_dssp             HHTSHHHHHHHHHHHTTSCCCCCC
T ss_pred             HhCCHHHHHHHHHHhCCCCCcCCC
Confidence            77 467777788899999998854

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.3e-49  Score=361.67  Aligned_cols=254  Identities=17%  Similarity=0.220  Sum_probs=213.8

Q ss_pred             CCcEEEE-EeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCC---
Q 018834           33 CNQVLVE-GKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGK---  108 (350)
Q Consensus        33 ~~~v~~~-~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~---  108 (350)
                      ++++.++ .+++|++||||||+++|+||.+|+.+|.++|+.++.|+++++|||+|.|+.||+|+|+.++........   
T Consensus         2 y~~l~~~~~~~~I~~itlnrP~~~Nals~~m~~el~~~l~~~~~d~~v~~vvltg~~~~F~aG~dl~~~~~~~~~~~~~~   81 (275)
T d1dcia_           2 YESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDD   81 (275)
T ss_dssp             CSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCSS
T ss_pred             CceEEEEEccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccCccHHHhhhccccccccc
Confidence            5677775 478999999999999999999999999999999999999999999999999999999999876533221   


Q ss_pred             h----HHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhh
Q 018834          109 L----EECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH  184 (350)
Q Consensus       109 ~----~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~r  184 (350)
                      .    .....+......++..+.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~~D~ria~~~a~f~~pe~~~Gl~p~~~~~~~~~~  161 (275)
T d1dcia_          82 VARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPK  161 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHGGG
T ss_pred             ccchhhhhccchhhhHHHHHHHHhcCCCEEEEEeeEeehhhHHHHhhcCchhhccCccccchhccccccccccccccccc
Confidence            1    122344555677888999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccHH-H-HHHHhhcCCCCCHHHHHHCCCCccccCCCC-hHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCcch-HHHH
Q 018834          185 LPGH-L-GEFLALTGAKLNGAEMMACGLATHYSVSEK-LPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDKNS-VIHR  259 (350)
Q Consensus       185 l~g~-~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~-l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~  259 (350)
                      ++|. . +.++++||+.++|+||+++||||+|+|+++ +... .+.+.+++..+|.+++.+|+.++........+ ...+
T Consensus       162 ~~g~~~~~~~ll~~g~~~~a~eA~~~Glv~~v~~~~~~l~~~~~~~a~~i~~~~p~a~~~~K~~l~~~~~~~l~~~~~~e  241 (275)
T d1dcia_         162 VIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRDHSVDESLDYM  241 (275)
T ss_dssp             TCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred             ccccccccccccccccccchhhhccCCCceeeeehhhhhhhcccccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence            9984 3 578999999999999999999999999765 4444 44456788999999999999887654433333 3345


Q ss_pred             HHHHHHhcC-cCCHHHHHHHHhccCCCC
Q 018834          260 IDIVDKCFG-LDTVEEIIDSLESEASLI  286 (350)
Q Consensus       260 ~~~i~~~f~-~~~~~ei~~~lek~~~~~  286 (350)
                      ...+..+|. .+..|++.+++|||+|++
T Consensus       242 ~~~~~~~~~~~d~~Egi~AfleKR~pk~  269 (275)
T d1dcia_         242 ATWNMSMLQTQDIIKSVQAAMEKKDSKS  269 (275)
T ss_dssp             HHHHHHHTSSHHHHHHHHHHHTTCCGGG
T ss_pred             HHHHHHHhCCHHHHHHHHHHhCCCCCCC
Confidence            677888884 567777888999987643

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.5e-49  Score=362.28  Aligned_cols=244  Identities=18%  Similarity=0.250  Sum_probs=213.4

Q ss_pred             eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      ++||++||||||+++|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|.|++.+...    .......+....
T Consensus        13 ~~gI~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~f~~g~d~~~~~~~----~~~~~~~~~~~~   88 (266)
T d1hzda_          13 NRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKM----SSSEVGPFVSKI   88 (266)
T ss_dssp             GTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTS----CHHHHHHHHHHH
T ss_pred             cCCEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhCCCcceEEEeccccccccccccccccccc----cchhhhhhhhHH
Confidence            467999999999999999999999999999999999999999999998 689999999988642    344556677888


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHHhhcCC
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFLALTGA  198 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~ltG~  198 (350)
                      +.++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. +++|++||+
T Consensus        89 ~~~~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~ig~~~a~~l~ltg~  168 (266)
T d1hzda_          89 RAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLAKELIFSAR  168 (266)
T ss_dssp             HHHHHHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCcccccccccccccccceeccccceeeecCCcEEeecccceeecCCccceeeehhhhHHHHHHhhhccCC
Confidence            8999999999999999999999999999999999999999999999999999999999999999999988 999999999


Q ss_pred             CCCHHHHHHCCCCccccCCCChH-HHHH----HHHHhccCCHHHHHHHHHHHhccCCCCcchHHH-HHHHHHHhc-CcCC
Q 018834          199 KLNGAEMMACGLATHYSVSEKLP-LIEE----ELGKLVTDDPSVIEACLEKYSDLVYPDKNSVIH-RIDIVDKCF-GLDT  271 (350)
Q Consensus       199 ~l~a~eA~~~GLv~~vv~~~~l~-~~~~----~l~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~i~~~f-~~~~  271 (350)
                      .++|++|+++||||++||++++. .+.+    .+++++..+|.+++.+|+.++............ +...+..+| +.+.
T Consensus       169 ~~~a~eA~~~Glv~~vv~~~~l~~~~~~~a~~~a~~i~~~~p~a~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~  248 (266)
T d1hzda_         169 VLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDR  248 (266)
T ss_dssp             EEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHH
T ss_pred             ccCHHHhhcccccccccChhhhhhHHHHHHHHHHHhcccCChHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHH
Confidence            99999999999999999998753 2222    235777899999999999998765544333333 466777788 4677


Q ss_pred             HHHHHHHHhccCCCCCc
Q 018834          272 VEEIIDSLESEASLIND  288 (350)
Q Consensus       272 ~~ei~~~lek~~~~~~~  288 (350)
                      .|++.+|+|||+|+|.+
T Consensus       249 ~Eg~~AF~eKR~P~f~G  265 (266)
T d1hzda_         249 LEGLLAFKEKRPPRYKG  265 (266)
T ss_dssp             HHHHHHHTTTSCCCCCC
T ss_pred             HHHHHHHhCCCCCCCCC
Confidence            77888999999998865

>d1q52a_ c.14.1.3 (A:) Naphthoate synthase MenB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Naphthoate synthase MenB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.4e-48  Score=359.98  Aligned_cols=255  Identities=16%  Similarity=0.197  Sum_probs=200.6

Q ss_pred             CCcEEEEE--eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcC-------CCccccCCChhhHHHh
Q 018834           33 CNQVLVEG--KANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGS-------GRAFCAGGDIVSLYHF  103 (350)
Q Consensus        33 ~~~v~~~~--~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~-------g~~F~aG~Dl~~~~~~  103 (350)
                      .+.|++++  +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.       |+.||+|+|++.....
T Consensus        17 ~~~i~~~~~~~~gi~~ItlnRP~~~NAl~~~m~~eL~~~l~~~~~d~~vr~vVltg~~~~f~~gG~~f~ag~Dl~~~~~~   96 (297)
T d1q52a_          17 LTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRS   96 (297)
T ss_dssp             CSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCC--------
T ss_pred             CcceEEEEEccCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCccEEEEecCCCcccchhhhhhhcchhhhhccc
Confidence            44578875  58999999999999999999999999999999999999999999997       4578888888765432


Q ss_pred             hhc-------CChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCC-eeEecccccccccCC
Q 018834          104 MNQ-------GKLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGK-TVFATPETLIGFHPD  175 (350)
Q Consensus       104 ~~~-------~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~-a~f~~Pe~~iGl~P~  175 (350)
                      ...       +..+.........+.+...|.++||||||+|||+|+|||++|+++||+||++++ ++|++||+++|++|+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GGG~~lal~~D~~ia~~~~~~f~~pe~~~Gl~p~  176 (297)
T d1q52a_          97 GYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDG  176 (297)
T ss_dssp             ---------------------CHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCGGGGTCCCC
T ss_pred             ccccccccccchhhhHHHHHHHHHHHHHHHHhcCCeEEEEEcceeeeccchhhhhhhccccccccccceeeeeccccccc
Confidence            111       111222333444667888999999999999999999999999999999999875 579999999999999


Q ss_pred             CchHHHHhhccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHH-HHHHHHhccCCHHHHHHHHHHHhccCCCCc
Q 018834          176 AGASFYLSHLPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLI-EEELGKLVTDDPSVIEACLEKYSDLVYPDK  253 (350)
Q Consensus       176 ~G~s~~L~rl~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~~  253 (350)
                      +|++++|+|++|.. ++++++||+.++|+||+++||||+++|++++.+. .+.+.+++..++.+++.+|+.++.......
T Consensus       177 ~~~~~~L~r~iG~~~a~~llltg~~~~a~eA~~~Glv~~vv~~~el~~~~~~~a~~l~~~~~~a~~~~K~~~~~~~~~~~  256 (297)
T d1q52a_         177 GYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQRMLKFAFNLLDDGLV  256 (297)
T ss_dssp             STTTHHHHHHHCHHHHHHHHHHCCEECHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTHHH
T ss_pred             cccccccccccCccceeeccccccccchHhhhhhccccccCchHHhhHHHHHHhhhhccCCHHHHHHHHHHHHHhhcChH
Confidence            99999999999988 9999999999999999999999999999998764 445578889999999999998876432211


Q ss_pred             chHHHHHHHHHHhc-CcCCHHHHHHHHhccCCCCC
Q 018834          254 NSVIHRIDIVDKCF-GLDTVEEIIDSLESEASLIN  287 (350)
Q Consensus       254 ~~~~~~~~~i~~~f-~~~~~~ei~~~lek~~~~~~  287 (350)
                      .......+.+..++ +.+..|++.+|+|||+|+|.
T Consensus       257 ~~~~~~~~~~~~~~~s~d~~Egv~AF~eKR~P~f~  291 (297)
T d1q52a_         257 GQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWS  291 (297)
T ss_dssp             HHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCT
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence            12222345566667 45667788899999998774

>d2a7ka1 c.14.1.3 (A:1-230) Carbapenem biosynthes protein CarB {Pectobacterium carotovorum [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Carbapenem biosynthes protein CarB
species: Pectobacterium carotovorum [TaxId: 554]

Probab=100.00  E-value=1e-47  Score=345.83  Aligned_cols=209  Identities=17%  Similarity=0.238  Sum_probs=188.6

Q ss_pred             EEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChHHHHH
Q 018834           36 VLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLEECKD  114 (350)
Q Consensus        36 v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~~~~  114 (350)
                      +..+.+++|++||||||+++|++|.+|+.+|.+++++++.|+++++|||+|.| ++||+|+|++++...   ...+....
T Consensus         2 ~~~~~~d~I~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~i~~vVl~~~g~~~F~aG~Dl~~~~~~---~~~~~~~~   78 (230)
T d2a7ka1           2 VFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQL---SRSEDIEE   78 (230)
T ss_dssp             EEEEEETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC----CHHHHHH
T ss_pred             EEEEecCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCcccccceeccchhhhhhhccccccccc---cccccccc
Confidence            34567899999999999999999999999999999999999999999999987 899999999998753   23345667


Q ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHH-HHHH
Q 018834          115 FFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHL-GEFL  193 (350)
Q Consensus       115 ~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l  193 (350)
                      ++...++++..+.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+ .+|++++|.. ++++
T Consensus        79 ~~~~~~~~~~~i~~~~kpvIaav~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~G~~p~~g~-~~l~~~iG~~~a~~l  157 (230)
T d2a7ka1          79 WIDRVIDLYQAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGA-AILGFTHGFSTMQEI  157 (230)
T ss_dssp             HHHHHHHHHHHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHH-HHHHHHHCHHHHHHH
T ss_pred             chhhhhhhhhcccchhcceeeecccccccccccchhccchhhccccchhhhccccccccccccc-ccccccccccccccc
Confidence            7888889999999999999999999999999999999999999999999999999999998876 5799999987 9999


Q ss_pred             hhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhcc
Q 018834          194 ALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDL  248 (350)
Q Consensus       194 ~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~  248 (350)
                      ++||++++|+||+++||||+++|++++.+.. +.+.+++..++.++...|+.+++.
T Consensus       158 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~ia~~~~~a~~~~K~~l~~~  213 (230)
T d2a7ka1         158 IYQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFINTKRAVNKP  213 (230)
T ss_dssp             HHHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred             ccccccchHHHHHHhhhcccCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999998887644 444788899999999999988753

>d1pjha_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-46  Score=345.31  Aligned_cols=188  Identities=16%  Similarity=0.140  Sum_probs=170.1

Q ss_pred             CCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcC-----
Q 018834           33 CNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQG-----  107 (350)
Q Consensus        33 ~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~-----  107 (350)
                      ++.|.++.+|+|++||||||+++|++|.+|+.+|.++|+.++.|++|++|||+|.|++||+|+|++++.......     
T Consensus         4 ~e~i~~~~~~~v~~Itlnrp~~~Na~~~~~~~el~~al~~~~~d~~v~~vVl~g~g~~FsaG~Dl~~~~~~~~~~~~~~~   83 (266)
T d1pjha_           4 NEKISYRIEGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTNKYP   83 (266)
T ss_dssp             BTTEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------CCS
T ss_pred             CCeEEEEEECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeccccccccchhHHHHHhcccccccccc
Confidence            467999999999999999999999999999999999999999999999999999999999999999987542111     


Q ss_pred             --ChHHHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEe-CCeeEecccccccccCCCchHHHHhh
Q 018834          108 --KLEECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVAC-GKTVFATPETLIGFHPDAGASFYLSH  184 (350)
Q Consensus       108 --~~~~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riat-e~a~f~~Pe~~iGl~P~~G~s~~L~r  184 (350)
                        .......++...+.+...+.++|||+||+|||+|+|||++|+++||||||+ ++++|++||+++|++|++|++++|+|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~l~~~~kP~IAav~G~a~GgG~~lal~~D~~ia~~~~~~~~~pe~~lGl~p~~g~~~~l~r  163 (266)
T d1pjha_          84 SETSKWVSNFVARNVYVTDAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTVSLPL  163 (266)
T ss_dssp             SHHHHHHHHTHHHHHHHHHHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHHhcchhhhhhhhcccccccccchhccchhhhhhcccccccccccccccccccccccccc
Confidence              123345667778889999999999999999999999999999999999996 56889999999999999999999999


Q ss_pred             ccHHH-HHHHhhcCCCCCHHHHHHCCCCccccCCCCh
Q 018834          185 LPGHL-GEFLALTGAKLNGAEMMACGLATHYSVSEKL  220 (350)
Q Consensus       185 l~g~~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l  220 (350)
                      ++|.. +++|++||+.++|+||+++||||+|++++++
T Consensus       164 ~~g~~~a~~llltg~~~~a~eA~~~Glv~~v~~~~~~  200 (266)
T d1pjha_         164 KFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSS  200 (266)
T ss_dssp             HHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTT
T ss_pred             ccccchhhhhhccCCcCCHHHHHHCCCEeEeeCchhh
Confidence            99988 9999999999999999999999999987654

>d1sg4a1 c.14.1.3 (A:2-250) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=2.1e-46  Score=341.19  Aligned_cols=210  Identities=18%  Similarity=0.210  Sum_probs=189.8

Q ss_pred             CcEEEEEe--CCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCC-CccccCCChhhHHHhhhcCChH
Q 018834           34 NQVLVEGK--ANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSG-RAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        34 ~~v~~~~~--~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g-~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      +.|+++.+  +||++||||||+ +|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++..    ....
T Consensus         2 ~~ilve~~~~~gIa~itln~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vvl~g~g~~~Fs~G~Dl~~~~~----~~~~   76 (249)
T d1sg4a1           2 QRVLVEPDAGAGVAVMKFKNPP-VNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCG----RSPA   76 (249)
T ss_dssp             CSEEEEEETTTTEEEEEECCTT-TTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSS----CCHH
T ss_pred             CcEEEEEECCCCEEEEEECCCC-cCCCCHHHHHHHHHHHHHHHhCCCccEEEEEeccceeEecccccccccc----cccc
Confidence            35666665  679999999997 6999999999999999999999999999999998 58999999998753    3455


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeE--ecccccccccCCCchHHHHhhccHH
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVF--ATPETLIGFHPDAGASFYLSHLPGH  188 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f--~~Pe~~iGl~P~~G~s~~L~rl~g~  188 (350)
                      ....++...++++.++.++|||+||+|||+|+|||++|+++|||||++++++|  ++||+++|++|++|++++|++++|.
T Consensus        77 ~~~~~~~~~~~~~~~l~~~~kpvIa~v~G~a~GgG~~lal~~D~~ia~~~a~f~~~~pe~~~Gl~p~~g~~~~l~~~iG~  156 (249)
T d1sg4a1          77 HYAGYWKAVQELWLRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGH  156 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCH
T ss_pred             cccccchhhHHHHHhhhcCccccchhhcccccccccccccccccceeecccccccccccccccccccccccccccccccc
Confidence            66778888999999999999999999999999999999999999999999876  7899999999999999999999998


Q ss_pred             H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHH-HHHHHhccCCHHHHHHHHHHHhcc
Q 018834          189 L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIE-EELGKLVTDDPSVIEACLEKYSDL  248 (350)
Q Consensus       189 ~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~-~~l~~l~~~~~~~i~~~~~~~~~~  248 (350)
                      . ++++++||++++|++|+++||||+++|++++.+.. +.+.+++..++.++...|+.++..
T Consensus       157 ~~a~~lll~g~~~~a~~A~~~Glv~~v~~~~~l~~~a~~~a~~l~~~~~~a~~~~K~~~~~~  218 (249)
T d1sg4a1         157 RAAERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKA  218 (249)
T ss_dssp             HHHHHHHHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccHHHHHhhccccccCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            8 99999999999999999999999999999987644 444688899999999999888753

>d1szoa_ c.14.1.3 (A:) 6-oxo camphor hydrolase {Rhodococcus erythropolis [TaxId: 1833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 6-oxo camphor hydrolase
species: Rhodococcus erythropolis [TaxId: 1833]

Probab=100.00  E-value=7.1e-46  Score=337.59  Aligned_cols=213  Identities=16%  Similarity=0.212  Sum_probs=194.4

Q ss_pred             CCCCcEEEEEeCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChH
Q 018834           31 DLCNQVLVEGKANSRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLE  110 (350)
Q Consensus        31 ~~~~~v~~~~~~~v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~  110 (350)
                      ..++.|+++++|+|++||||||++.|++|.+|+.+|.+++++++.|+++++|||+|.|+.||+|+|++++.    ....+
T Consensus        10 ~~y~~i~~~~~~~v~~itln~p~~~Nal~~~~~~el~~al~~~~~d~~v~~vvl~g~g~~FsaG~Dl~~~~----~~~~~   85 (249)
T d1szoa_          10 QKYENIRLERDGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFN----LGTPH   85 (249)
T ss_dssp             TSCTTEEEEEETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSC----CSSHH
T ss_pred             CCCCeEEEEEECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcceEeeecccccccccchhhhhh----ccccc
Confidence            45778999999999999999999999999999999999999999999999999999999999999999874    34556


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEe-cccccccccCCCchHHHHhhccHHH
Q 018834          111 ECKDFFRTLYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFA-TPETLIGFHPDAGASFYLSHLPGHL  189 (350)
Q Consensus       111 ~~~~~~~~~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~-~Pe~~iGl~P~~G~s~~L~rl~g~~  189 (350)
                      ....++...+.++..+.++|||+||++||.|. ||++|+++||+||++++++|. +||+++|++|++|++++|+|++|..
T Consensus        86 ~~~~~~~~~~~l~~~i~~~~~pvIa~v~g~~~-GG~~l~l~~D~ria~~~a~f~~~pe~~~g~~p~~g~~~~l~r~ig~~  164 (249)
T d1szoa_          86 DWDEIIFEGQRLLNNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSN  164 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHH
T ss_pred             chhhhhhhhhhhhhhcccCcccceeeeccccc-cccccccccccccccCCcEEEEeeccccccccccccccccccccCcc
Confidence            67778888889999999999999999999885 577999999999999999985 7999999999999999999999988


Q ss_pred             -HHHHhhcCCCCCHHHHHHCCCCccccCCCChHHHHHH-HHHhccCCHHHHHHHHHHHhcc
Q 018834          190 -GEFLALTGAKLNGAEMMACGLATHYSVSEKLPLIEEE-LGKLVTDDPSVIEACLEKYSDL  248 (350)
Q Consensus       190 -a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~~~~~-l~~l~~~~~~~i~~~~~~~~~~  248 (350)
                       +++|++||++++++||+++||||+|+|++++.+.... +.+++..++.+++.+|+.+++.
T Consensus       165 ~a~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~~~K~~l~~~  225 (249)
T d1szoa_         165 RGRYFLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARRYARKVLTRQ  225 (249)
T ss_dssp             HHHHHHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHSHH
T ss_pred             ceeeecccCCCCCHHHHHHhCCcCcccCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence             9999999999999999999999999999888765444 4688899999999999888753

>d2f6ia1 c.14.1.1 (A:177-366) Clp protease, ClpP subunit {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Plasmodium falciparum [TaxId: 5833]

Probab=98.15  E-value=1.3e-05  Score=67.41  Aligned_cols=134  Identities=13%  Similarity=0.049  Sum_probs=89.5

Q ss_pred             CCHHHHHHHHHHHHHHHcC--CCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           58 LNTNMGAKLNKLFKAWEND--PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d--~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      +|.++..++...|..++..  +.|.. .|      -|.|||+..-.                   .+...+..++.|+..
T Consensus        27 Id~~~~~~~i~~l~~l~~~~~~~I~l-~I------NS~GG~v~~g~-------------------ai~d~i~~~~~~v~t   80 (190)
T d2f6ia1          27 INKKTADELISQLLYLDNINHNDIKI-YI------NSPGGSINEGL-------------------AILDIFNYIKSDIQT   80 (190)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCCSCEEE-EE------EECCBCHHHHH-------------------HHHHHHHHSSSCEEE
T ss_pred             eCHHHHHHHHHHHHHHhccCCCCeEE-EE------eCchhhhhHHH-------------------HHHHHHHhhCCceEE
Confidence            7889999998888777542  23433 33      45667765422                   233445678999999


Q ss_pred             EECCcccccccccccccC--EEEEeCCeeEecccccccccCCCch----HHHHhhccHHH-H-------------HHHhh
Q 018834          136 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGA----SFYLSHLPGHL-G-------------EFLAL  195 (350)
Q Consensus       136 ~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~----s~~L~rl~g~~-a-------------~~l~l  195 (350)
                      .+.|.|++.|.-+.++++  .|++.++++|-+.+...|..-...-    ...+-++.... -             ..+.-
T Consensus        81 v~~G~aaS~a~~i~~aG~kg~R~~~pns~imiH~~s~~~~G~~~di~~~~~~l~~~~~~~~~i~a~~tg~~~~~i~~~~~  160 (190)
T d2f6ia1          81 ISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSD  160 (190)
T ss_dssp             EEEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred             EEeccccchhHHHHHhCCCCccccCCCcEEEEcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHhcc
Confidence            999999999999999888  6999999999999988776321110    01111111111 1             11222


Q ss_pred             cCCCCCHHHHHHCCCCccccCC
Q 018834          196 TGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       196 tG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      .-..++|+||+++||||+|+.+
T Consensus       161 ~d~~l~a~EAl~~GliD~Ii~~  182 (190)
T d2f6ia1         161 RDYYMNALEAKQYGIIDEVIET  182 (190)
T ss_dssp             TTCEECHHHHHHHTSCSEECCC
T ss_pred             CCeeecHHHHHHcCCCcEEccc
Confidence            3456899999999999999965

>d1yg6a1 c.14.1.1 (A:11-193) Clp protease, ClpP subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Escherichia coli [TaxId: 562]

Probab=98.06  E-value=6.7e-06  Score=68.75  Aligned_cols=135  Identities=16%  Similarity=0.107  Sum_probs=89.0

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCce--EEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           58 LNTNMGAKLNKLFKAWENDPNIG--FVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d~~v~--~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      ++.++...+...+..++.++..+  .+.|.+      .|||+..-.                   .+...|..++.|+..
T Consensus        25 I~~~~~~~~i~~l~~l~~~~~~~~I~l~InS------~GG~v~~g~-------------------~i~d~i~~~~~~v~t   79 (183)
T d1yg6a1          25 VEDHMANLIVAQMLFLEAENPEKDIYLYINS------PGGVITAGM-------------------SIYDTMQFIKPDVST   79 (183)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEEEEEE------CCBCHHHHH-------------------HHHHHHHHSSSCEEE
T ss_pred             ECHHHHHHHHHHHHHhhhhccCCceEEEEeC------CCccHHHHH-------------------HHHHHHHhCCCCEEE
Confidence            68889999988888776543222  234444      466654321                   234456678999999


Q ss_pred             EECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchHH----HHhhccHHH--------------HHHHhh
Q 018834          136 ILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF----YLSHLPGHL--------------GEFLAL  195 (350)
Q Consensus       136 ~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s~----~L~rl~g~~--------------a~~l~l  195 (350)
                      .+.|.|++.|.-|.++||  .|++.++++|-+-+...|..-...-..    .+-++....              -..++-
T Consensus        80 v~~G~aaS~a~~I~~ag~~~~R~~~~ns~~miH~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~tg~~~e~i~~~~~  159 (183)
T d1yg6a1          80 ICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTE  159 (183)
T ss_dssp             EEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTS
T ss_pred             EEEEEeHHHHHHHHHcCCCCceeeCCCceEEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHHhc
Confidence            999999999999988888  799999999988887766531111000    011111111              112222


Q ss_pred             cCCCCCHHHHHHCCCCccccCC
Q 018834          196 TGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       196 tG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      .-..++|+||+++||||+|+..
T Consensus       160 ~d~~lta~EAl~~GliD~Ii~~  181 (183)
T d1yg6a1         160 RDRFLSAPEAVEYGLVDSILTH  181 (183)
T ss_dssp             SCEEEEHHHHHHHTSSSEECCC
T ss_pred             cCccccHHHHHHcCCCcEEecc
Confidence            2345799999999999999975

>d2cbya1 c.14.1.1 (A:15-193) Clp protease, ClpP subunit {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.00  E-value=1.6e-05  Score=66.14  Aligned_cols=134  Identities=16%  Similarity=0.126  Sum_probs=86.2

Q ss_pred             CCHHHHHHHHHHHHHHHcC---CCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           58 LNTNMGAKLNKLFKAWEND---PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d---~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      +|.++..++...|..++.+   +.+. +.|.      |.|||+..-.                   .+...|..++.|+.
T Consensus        22 I~~~~~~~~i~~l~~l~~~~~~~~I~-l~In------S~GG~v~~gl-------------------~i~d~i~~~~~~v~   75 (179)
T d2cbya1          22 VNDEIANRLCAQILLLAAEDASKDIS-LYIN------SPGGSISAGM-------------------AIYDTMVLAPCDIA   75 (179)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEE-EEEE------ECCBCHHHHH-------------------HHHHHHHHCSSCEE
T ss_pred             ECHHHHHHHHHHHHHHhccCCCCeEE-EEee------CCCCCHHHHH-------------------HHHHHHHhhcccee
Confidence            7889999998887655433   2333 3444      4566664322                   13344567899999


Q ss_pred             EEECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchHH----HHhhcc-----------HH---HHHHHh
Q 018834          135 AILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASF----YLSHLP-----------GH---LGEFLA  194 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s~----~L~rl~-----------g~---~a~~l~  194 (350)
                      ..+.|.|++.|.-+.+++|  .|++.++++|-+-+...|+.-...-..    .+-++.           |.   .-..++
T Consensus        76 t~~~G~aaS~a~~il~ag~k~~R~~~~~s~~miH~~~~~~~G~~~~i~~~~~~l~~~~~~i~~i~a~~tg~~~~~i~~~~  155 (179)
T d2cbya1          76 TYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADS  155 (179)
T ss_dssp             EEEEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC----------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred             eehhhhhhhHHHHHHHcCCCCceEECCchHhhcCCCchhcCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHhh
Confidence            9999999999999999998  899999999998887666532211100    011111           10   012234


Q ss_pred             hcCCCCCHHHHHHCCCCccccCC
Q 018834          195 LTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       195 ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      -.-..++|+||+++||||+|+..
T Consensus       156 ~~d~~l~a~EA~~~GliDeIi~~  178 (179)
T d2cbya1         156 DRDRWFTAAEALEYGFVDHIITR  178 (179)
T ss_dssp             HTTCEEEHHHHHHHTSCSEECSC
T ss_pred             cCCceecHHHHHHcCCCcEEecC
Confidence            45677899999999999999864

>d1y7oa1 c.14.1.1 (A:2-193) Clp protease, ClpP subunit {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.89  E-value=4e-05  Score=64.37  Aligned_cols=134  Identities=11%  Similarity=0.090  Sum_probs=85.5

Q ss_pred             CCHHHHHHHHHHHHHHHcC-C--CceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           58 LNTNMGAKLNKLFKAWEND-P--NIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d-~--~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      ++.++...+...|..++.+ +  .+. +.|.+.      |||+..-.                   .+...+..++.||.
T Consensus        33 I~~~~~~~~~~~l~~l~~~~~~~~I~-l~InS~------GG~v~~gl-------------------ai~d~i~~~~~~v~   86 (192)
T d1y7oa1          33 VEDNMANSVIAQLLFLDAQDSTKDIY-LYVNTP------GGSVSAGL-------------------AIVDTMNFIKADVQ   86 (192)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCTTSCEE-EEEEEC------CBCHHHHH-------------------HHHHHHHHSSSCEE
T ss_pred             EchHHHHHHHHHHHHhhhhcccCcee-eeecCC------CCCHHHHH-------------------HHHHHHHhcCcceE
Confidence            7889999988888766532 2  233 445554      55554321                   23344667899999


Q ss_pred             EEECCcccccccccccc--cCEEEEeCCeeEecccccccccCCCchHH------HHhhc---c--------HH---HHHH
Q 018834          135 AILNGVTMGGGAGVSIP--GTFRVACGKTVFATPETLIGFHPDAGASF------YLSHL---P--------GH---LGEF  192 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~--~D~riate~a~f~~Pe~~iGl~P~~G~s~------~L~rl---~--------g~---~a~~  192 (350)
                      ..+.|.|++.|.-|.++  ++.|++.++++|-+-....|.........      .+-++   +        |.   .-..
T Consensus        87 t~~~G~aaS~as~il~aG~~g~R~~~pns~~miHq~~~~~~G~~~~~~~~~~~~el~~~~~~i~~i~~~~tg~~~~~i~~  166 (192)
T d1y7oa1          87 TIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHA  166 (192)
T ss_dssp             EEEEEEEETHHHHHHTTSCTTCEEECTTCEEECCCCC--------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred             EEeccccCCccceeeeecCCCccccchHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence            99999999988877665  57999999999999888777643221110      11111   1        10   0122


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCC
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      .+-.-..++|+||+++||||+|+.+
T Consensus       167 ~~~rd~~lsa~EAleyGliD~Ii~~  191 (192)
T d1y7oa1         167 DAERDNWMSAQETLEYGFIDEIMAN  191 (192)
T ss_dssp             HHHSCCCBCHHHHHHHTSCSEECCC
T ss_pred             hhcCCceecHHHHHHcCCCcEEecC
Confidence            3344667999999999999999865

>d1tg6a1 c.14.1.1 (A:1-193) Clp protease, ClpP subunit {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Clp protease, ClpP subunit
domain: Clp protease, ClpP subunit
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=97.72  E-value=9e-05  Score=62.18  Aligned_cols=132  Identities=14%  Similarity=0.110  Sum_probs=87.6

Q ss_pred             CCHHHHHHHHHHHHHHHcC---CCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           58 LNTNMGAKLNKLFKAWEND---PNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        58 l~~~m~~~L~~~l~~~~~d---~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      +|.++...+...+..++..   ..+.. .|.+      .|||+..-.                   .+...+..++-||.
T Consensus        35 I~~~~~~~~i~~l~~l~~~~~~~~I~l-~InS------~GG~v~~g~-------------------~i~d~i~~~~~~V~   88 (193)
T d1tg6a1          35 IDDSVASLVIAQLLFLQSESNKKPIHM-YINS------PGGVVTAGL-------------------AIYDTMQYILNPIC   88 (193)
T ss_dssp             BCHHHHHHHHHHHHHHHHHCSSSCEEE-EEEE------CCBCHHHHH-------------------HHHHHHHHSCSCEE
T ss_pred             EchHHHHHHHHHHHHhcccCCCcEEEE-Eeec------CcccHHHHH-------------------HHHHHHHhhcCceE
Confidence            6788888888777766542   23444 4454      455543211                   23344667889999


Q ss_pred             EEECCcccccccccccccC--EEEEeCCeeEecccccccccCCCchHHHH------hhccHHH-H-------------HH
Q 018834          135 AILNGVTMGGGAGVSIPGT--FRVACGKTVFATPETLIGFHPDAGASFYL------SHLPGHL-G-------------EF  192 (350)
Q Consensus       135 a~i~G~~~GgG~~Lal~~D--~riate~a~f~~Pe~~iGl~P~~G~s~~L------~rl~g~~-a-------------~~  192 (350)
                      ..+.|.|++.|.-|.++++  .|++.++++|-+-+...|..-  -.+..-      -++.... .             ..
T Consensus        89 tv~~G~aaS~a~~il~aG~~g~R~~~pns~~miHq~~~~~~G--~~~di~~~~~el~~~~~~i~~i~a~~Tg~~~~~i~~  166 (193)
T d1tg6a1          89 TWCVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARG--QATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIES  166 (193)
T ss_dssp             EEEEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCCCS--SHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_pred             EEEccchHHHHHHHhhcCccCccccCcccHHHhcCCccCCCc--CHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence            9999999999999999998  699999999999888776632  122211      1111111 1             12


Q ss_pred             HhhcCCCCCHHHHHHCCCCccccCC
Q 018834          193 LALTGAKLNGAEMMACGLATHYSVS  217 (350)
Q Consensus       193 l~ltG~~l~a~eA~~~GLv~~vv~~  217 (350)
                      ++-.-..++|+||+++||||+|+..
T Consensus       167 ~~~rD~~lta~EAl~yGliD~Ii~~  191 (193)
T d1tg6a1         167 AMERDRYMSPMEAQEFGILDKVLVH  191 (193)
T ss_dssp             HHSSCEEECHHHHHHHTSCSEECSS
T ss_pred             HhccCccCCHHHHHHcCCCCEEccC
Confidence            2222345899999999999999853

>d1on3a1 c.14.1.4 (A:8-260) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S)
species: Propionibacterium freudenreichii [TaxId: 1744]

Probab=97.24  E-value=0.0046  Score=53.55  Aligned_cols=140  Identities=14%  Similarity=0.167  Sum_probs=87.7

Q ss_pred             EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHH
Q 018834           44 SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFI  123 (350)
Q Consensus        44 v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~  123 (350)
                      |.++-.|-.-+.-+++......+..+.+.+..+. +-+|.+.-     |+|+.+.+-.        .....+-+..+.+ 
T Consensus        91 v~v~a~Dftv~GGS~g~~~~~K~~~a~e~A~~~~-lPlV~l~~-----sgG~r~~eg~--------~~l~~~~~~~~~~-  155 (253)
T d1on3a1          91 VHAASQDFTVMGGSAGETQSTKVVETMEQALLTG-TPFLFFYD-----SGGARIQEGI--------DSLSGYGKMFFAN-  155 (253)
T ss_dssp             EEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHT-CCEEEEEE-----ECSBCGGGTH--------HHHHHHHHHHHHH-
T ss_pred             chhhhchhhhhcccceecccchhhhhHHHHhhcC-CCeEEEEe-----cCCCcccccc--------eeccccceehHHH-
Confidence            3334444444678899999999999998887763 45555542     4444443311        1111111111222 


Q ss_pred             HHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCCHH
Q 018834          124 YLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLNGA  203 (350)
Q Consensus       124 ~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~a~  203 (350)
                      ..+.. ..|+|+++.|+|.||+......||++|+++.+.+.+.          |     |+++-      ..+|+.++.+
T Consensus       156 ~~ls~-~vP~i~vv~Gp~~GG~a~~~~~~d~vi~~~~a~i~~a----------G-----P~vVe------~~~ge~~~~e  213 (253)
T d1on3a1         156 VKLSG-VVPQIAIIAGPCAGGASYSPALTDFIIMTKKAHMFIT----------G-----PQVIK------SVTGEDVTAD  213 (253)
T ss_dssp             HHHTT-TSCEEEEEEEEEESGGGHHHHHSSEEEEETTCEEESS----------C-----HHHHH------HHHCCCCCHH
T ss_pred             HHHhc-cceEEEEEecCcccceeeccchhhheeccccceEEec----------C-----cchhh------hhhCCcCChH
Confidence            23333 4899999999999999999999999999987655431          1     11111      2457777765


Q ss_pred             HH-------HHCCCCccccCCCCh
Q 018834          204 EM-------MACGLATHYSVSEKL  220 (350)
Q Consensus       204 eA-------~~~GLv~~vv~~~~l  220 (350)
                      |.       ...|.+|.++++++.
T Consensus       214 elGga~~h~~~sG~iD~v~~~e~~  237 (253)
T d1on3a1         214 ELGGAEAHMAISGNIHFVAEDDDA  237 (253)
T ss_dssp             HHHSHHHHHHTTCCCSEEESSHHH
T ss_pred             hccCHHHhhhccccceEEECCHHH
Confidence            43       357999999988654

>d2a7sa1 c.14.1.4 (A:20-277) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.14  E-value=0.0052  Score=53.31  Aligned_cols=142  Identities=14%  Similarity=0.170  Sum_probs=88.9

Q ss_pred             EeCC-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHH
Q 018834           40 GKAN-SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT  118 (350)
Q Consensus        40 ~~~~-v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~  118 (350)
                      .++. |.++-.|-.-+.-+++....+.+..+.+.+..+ .+-+|.+.-     |+|+.+.+-..        ... ....
T Consensus        86 I~G~~v~v~a~Dft~~gGS~g~~~g~K~~ra~e~A~~~-~lP~I~l~d-----sgGar~~eg~~--------~~~-~~~~  150 (258)
T d2a7sa1          86 IDGRDVCIFSQDATVFGGSLGEVYGEKIVKVQELAIKT-GRPLIGIND-----GAGARIQEGVV--------SLG-LYSR  150 (258)
T ss_dssp             SSSSEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSBCGGGCTH--------HHH-HHHH
T ss_pred             eccceEEEecccceEeCCccchhhhhHHHHHHHHHHhc-CCceEEEec-----cCCcccccccc--------ccc-chhh
Confidence            3444 444444544477889999999999999988876 456666553     33444432110        001 1111


Q ss_pred             HHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeC-CeeEecccccccccCCCchHHHHhhccHHHHHHHhhcC
Q 018834          119 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG-KTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTG  197 (350)
Q Consensus       119 ~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate-~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG  197 (350)
                      .+.... ...-..|+|+++.|.|.||+......||++|+.+ ++       .+++.   |     |+++     . ..||
T Consensus       151 ~~~~~~-~~~~~vP~I~~v~G~~~gG~a~~~~~~d~~vm~~~~a-------~i~~a---G-----P~vV-----~-~~~g  208 (258)
T d2a7sa1         151 IFRNNI-LASGVIPQISLIMGAAAGGHVYSPALTDFVIMVDQTS-------QMFIT---G-----PDVI-----K-TVTG  208 (258)
T ss_dssp             HHHHHH-HHTTTSCEEEEECSCCBSGGGHHHHHSSEEEEEBTTB-------BCBSS---C-----HHHH-----H-HHHC
T ss_pred             HHHHHH-HHcCCCCEEEEEecCcccHHHHHHHhccceEeecCce-------EEEcc---C-----hhHH-----H-HhcC
Confidence            112222 2245699999999999999999988899988765 44       33341   1     1111     1 3688


Q ss_pred             CCCCHHHH-------HHCCCCccccCCC
Q 018834          198 AKLNGAEM-------MACGLATHYSVSE  218 (350)
Q Consensus       198 ~~l~a~eA-------~~~GLv~~vv~~~  218 (350)
                      +.++.+|.       .+.|.+|.+++++
T Consensus       209 e~~~~eeLGga~~h~~~sG~~D~v~~de  236 (258)
T d2a7sa1         209 EEVTMEELGGAHTHMAKSGTAHYAASGE  236 (258)
T ss_dssp             CCCCHHHHHBHHHHHHTSCCCSEEESSH
T ss_pred             CccChhhccCHhHhhhhccccceEeCCH
Confidence            88988764       4579999999865

>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, AccA
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.0015  Score=58.37  Aligned_cols=135  Identities=13%  Similarity=0.025  Sum_probs=92.0

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEEE
Q 018834           56 NALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHVA  135 (350)
Q Consensus        56 Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~Ia  135 (350)
                      -+++++-.+.-.+.++.++.- ++-+|-|--+     .|.....-.         +.....+..-+.++.+.....|+|+
T Consensus       130 G~~~p~~~rKa~r~~~~a~~~-~~Pii~~vDt-----pG~~~g~~~---------E~~g~~~~~a~~~~~~~~~~vP~i~  194 (316)
T d2f9ya1         130 GMPAPEGYRKALRLMQMAERF-KMPIITFIDT-----PGAYPGVGA---------EERGQSEAIARNLREMSRLGVPVVC  194 (316)
T ss_dssp             GCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-----SCSCCSHHH---------HHTTHHHHHHHHHHHHHTCSSCEEE
T ss_pred             ccccHHHHHHHHHHHHHHHHc-CcceEEEEec-----CcccCCccc---------ccccHHHHHHHHHHHHHhCCCceEE
Confidence            457888888888888888875 5556655433     233222111         1111233445577788999999999


Q ss_pred             EECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccH-HH--HHHHhhcCCCCCHHHHHHCCCCc
Q 018834          136 ILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG-HL--GEFLALTGAKLNGAEMMACGLAT  212 (350)
Q Consensus       136 ~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g-~~--a~~l~ltG~~l~a~eA~~~GLv~  212 (350)
                      +|-|-+.|||.-....+|.+.+.++++++.      +.|. |.+-.|.+-.. ..  |..+     .++++|++++|+||
T Consensus       195 vv~g~g~~gga~a~~~~d~v~m~~~a~~sv------ispE-g~AsILwkd~~~a~eaAeal-----klta~dL~~lgiID  262 (316)
T d2f9ya1         195 TVIGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPE-GCASILWKSADKAPLAAEAM-----GIIRPRLKELKLID  262 (316)
T ss_dssp             EEEEEEEHHHHHTTCCCSEEEECTTCEEES------SCHH-HHHHHHSSCSTTHHHHHHHH-----TCSHHHHHTTTSCS
T ss_pred             EEEhhhhchhhhhhhhhhHHHHHhhhHHhh------ccch-hhhhHhhccchhhcchHHHH-----hhhhHHHHHcCchh
Confidence            999999999987777799999999999982      2344 44444444222 11  3333     47899999999999


Q ss_pred             cccCC
Q 018834          213 HYSVS  217 (350)
Q Consensus       213 ~vv~~  217 (350)
                      ++++.
T Consensus       263 eII~E  267 (316)
T d2f9ya1         263 SIIPE  267 (316)
T ss_dssp             CCCCC
T ss_pred             hcccC
Confidence            99975

>d2f9yb1 c.14.1.4 (B:23-285) Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, AccD
species: Escherichia coli [TaxId: 562]

Probab=97.13  E-value=0.0016  Score=56.86  Aligned_cols=140  Identities=14%  Similarity=0.166  Sum_probs=86.4

Q ss_pred             EEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHH
Q 018834           45 RMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIY  124 (350)
Q Consensus        45 ~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~  124 (350)
                      .++-.|--=..-+++....+.+.++.+.+.++ .+-.|.++-     |.|+.+.+-.        .. ............
T Consensus        99 ~v~a~Dftv~gGS~g~~~~~Ki~~a~e~A~~~-~lPlI~~~~-----sgG~r~~e~~--------~s-l~~~~~~~~~~~  163 (263)
T d2f9yb1          99 VAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSA-----SGGARMQEAL--------MS-LMQMAKTSAALA  163 (263)
T ss_dssp             BEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEE-----ESSBCGGGTH--------HH-HHHHHHHHHHHH
T ss_pred             EEEeeeehhhccccccchhhHHhHHHHHHHHc-CCCeEEEec-----CCCccccccc--------ch-hhcchhHHHHHH
Confidence            34444444467889999999999999888765 455666553     4455544321        11 111222233334


Q ss_pred             HHhcCCCcEEEEECCccccccc-ccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCCC--
Q 018834          125 LLGTHLKPHVAILNGVTMGGGA-GVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKLN--  201 (350)
Q Consensus       125 ~i~~~~kP~Ia~i~G~~~GgG~-~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l~--  201 (350)
                      .+.....|+|+++.|.|.||+. .+++.+|++++++++.+++.          |     |+++-      ..+|+.++  
T Consensus       164 ~~~~~~vP~I~v~~g~~~GG~aa~~~~~~d~i~~~~~s~i~~a----------G-----P~vve------~~~ge~~~e~  222 (263)
T d2f9yb1         164 KMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA----------G-----PRVIE------QTVREKLPPG  222 (263)
T ss_dssp             HHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS----------C-----HHHHH------HHHTSCCCTT
T ss_pred             HHHhCCCceEEEecCCcchHHHhhhhhcCceEeeecceeeecc----------C-----HHHHh------hhcCCcCChh
Confidence            4556778999999999999986 47888888888887765531          1     11111      13344443  


Q ss_pred             ---HHHHHHCCCCccccCCCCh
Q 018834          202 ---GAEMMACGLATHYSVSEKL  220 (350)
Q Consensus       202 ---a~eA~~~GLv~~vv~~~~l  220 (350)
                         ++-..+.|+||.++++++.
T Consensus       223 ~g~a~~~~~~G~iD~vv~~ee~  244 (263)
T d2f9yb1         223 FQRSEFLIEKGAIDMIVRRPEM  244 (263)
T ss_dssp             TTBHHHHGGGTCCSEECCHHHH
T ss_pred             hccHHHHHhCCCCCEEECCHHH
Confidence               3334568999999976554

>d1xnya1 c.14.1.4 (A:10-267) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.12  E-value=0.0046  Score=53.69  Aligned_cols=142  Identities=16%  Similarity=0.171  Sum_probs=89.6

Q ss_pred             EeCC-EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHH
Q 018834           40 GKAN-SRMAILNRPSALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRT  118 (350)
Q Consensus        40 ~~~~-v~~ItLnrp~~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~  118 (350)
                      .++. |.++-.|..=+.-+++....+.+.++.+.+..+ .+-+|.|.-+     .|+.+.+-...        . .....
T Consensus        85 I~G~~v~v~a~Dftv~gGS~g~~~~~K~~r~~e~A~~~-~lPlI~l~ds-----gGarm~e~~~~--------~-~~~~~  149 (258)
T d1xnya1          85 VDGRPVAVFSQDFTVFGGALGEVYGQKIVKVMDFALKT-GCPVVGINDS-----GGARIQEGVAS--------L-GAYGE  149 (258)
T ss_dssp             ETTEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CSBCGGGTHHH--------H-HHHHH
T ss_pred             ECCEEEEEEechhhhhcCccchhhHHHHHHHHHHHHHc-CCceEEEecC-----CCcccCccccc--------c-cchhH
Confidence            3444 344444444477889999999999999988876 4566766654     34444332111        0 11111


Q ss_pred             HHHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeC-CeeEecccccccccCCCchHHHHhhccHHHHHHHhhcC
Q 018834          119 LYSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACG-KTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTG  197 (350)
Q Consensus       119 ~~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate-~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG  197 (350)
                      ........ .-..|+|+++.|.|.||+......||++|..+ ++.+       |+   .|     |+++-      ..+|
T Consensus       150 ~~~~~~~~-s~~vP~I~vv~G~~~gG~a~~~~~~~~vim~~~~a~i-------~~---aG-----P~vv~------~~~g  207 (258)
T d1xnya1         150 IFRRNTHA-SGVIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHM-------FI---TG-----PDVIK------TVTG  207 (258)
T ss_dssp             HHHHHHHT-TTTSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEE-------ES---SC-----HHHHH------HHHC
T ss_pred             HHHHHHHH-cCCCCEEEEEcCCcChhHHHHHHhccchhhcccceEE-------Ee---cC-----HHHHH------HHhc
Confidence            22222222 34699999999999999999888899888766 4433       33   11     11111      3678


Q ss_pred             CCCCHHHH-------HHCCCCccccCCC
Q 018834          198 AKLNGAEM-------MACGLATHYSVSE  218 (350)
Q Consensus       198 ~~l~a~eA-------~~~GLv~~vv~~~  218 (350)
                      +.++.+|+       ...|++|.+++++
T Consensus       208 e~i~~eelgga~~h~~~sG~~d~v~~de  235 (258)
T d1xnya1         208 EDVGFEELGGARTHNSTSGVAHHMAGDE  235 (258)
T ss_dssp             CCCCHHHHHBHHHHHHTSSCCSEEESSH
T ss_pred             CccChHHhccHHHHHhcCCeeEEEeCCH
Confidence            88888875       4579999999764

>d1vrga1 c.14.1.4 (A:1-251) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Thermotoga maritima [TaxId: 2336]

Probab=97.10  E-value=0.0051  Score=53.21  Aligned_cols=142  Identities=14%  Similarity=0.180  Sum_probs=88.9

Q ss_pred             eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      ++.-..|.-+.+. ..-+++......+..+.+.+..+ .+-+|.+..     |+|+.+.+-...        ...+ ...
T Consensus        84 ~G~~v~v~a~D~t~~gGs~g~~~~~K~~r~~e~A~~~-~~P~I~~~d-----sgG~r~~e~~~~--------l~~~-~~~  148 (251)
T d1vrga1          84 NGRKVAVFSQDFTVMGGSLGEMHAKKIVKLLDLALKM-GIPVIGIND-----SGGARIQEGVDA--------LAGY-GEI  148 (251)
T ss_dssp             TTEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEE-----ECSBCGGGTHHH--------HHHH-HHH
T ss_pred             ccEEEEEeeehhhhhhcccchHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCccccccccc--------cccc-hHH
Confidence            3443344444444 66788888889999988887766 345555543     345555432111        1111 111


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCC
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAK  199 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~  199 (350)
                      +..... ..-..|+|+++.|.|.||+......||++|+.+..      ..+++-+        |+++.      ..+|+.
T Consensus       149 ~~~~~~-~s~~iP~I~vv~G~~~gG~a~~~~~~d~~im~~~~------a~i~~aG--------p~vv~------~~~ge~  207 (251)
T d1vrga1         149 FLRNTL-ASGVVPQITVIAGPCAGGAVYSPALTDFIVMVDQT------ARMFITG--------PNVIK------AVTGEE  207 (251)
T ss_dssp             HHHHHH-HTTTSCEEEEEEEEEBGGGGHHHHHSSEEEEETTT------CBCBSSC--------HHHHH------HHHCCC
T ss_pred             HHHHHH-HCCCCCEEEEEccCccccceehhhhCceEEEEccc------eeEEecC--------chhhh------hhcCCc
Confidence            222222 24479999999999999999999999999987643      1233311        22222      367888


Q ss_pred             CCHHHH-------HHCCCCccccCCC
Q 018834          200 LNGAEM-------MACGLATHYSVSE  218 (350)
Q Consensus       200 l~a~eA-------~~~GLv~~vv~~~  218 (350)
                      ++.+|.       ...|.+|.+++++
T Consensus       208 ~~~eelGga~~h~~~sG~~D~v~~de  233 (251)
T d1vrga1         208 ISQEDLGGAMVHNQKSGNAHFLADND  233 (251)
T ss_dssp             CCHHHHHBHHHHHHTSCCCSEEESSH
T ss_pred             CChHHccchhhhhhccccceEEECCH
Confidence            998875       4679999999865

>d1pixa2 c.14.1.4 (A:1-287) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Glutaconyl-CoA decarboxylase A subunit
species: Acidaminococcus fermentans [TaxId: 905]

Probab=96.91  E-value=0.004  Score=54.93  Aligned_cols=164  Identities=13%  Similarity=0.090  Sum_probs=92.7

Q ss_pred             eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +|.-..|.-|.+. +.-+++....+.+.++++.+..+ .+-+|.|.-     |+|+.+.+-.+..  .........|.. 
T Consensus       102 ~G~~v~v~a~D~t~~gGs~~~~~~~K~~r~~~lA~~~-~lP~I~l~d-----s~Ga~~~~~~e~~--~~~~~~g~~~~~-  172 (287)
T d1pixa2         102 NGKWCVVVASDNKKLAGAWVPGQAECLLRASDTAKTL-HVPLVYVLN-----CSGVKFDEQEKVY--PNRRGGGTPFFR-  172 (287)
T ss_dssp             TTEEEEEEEECTTTTTTEECTTHHHHHHHHHHHHHHH-TCCEEEEEC-----CCEECGGGHHHHS--SSTTSTTHHHHH-
T ss_pred             ccceEEEEEeccccccccchhhHHHHHHHHHHhhhhc-CCCEEEEec-----CCcccCCcchhhc--cchhhHHHHHHH-
Confidence            3443344445544 55788889999999998888776 456666554     3344443211110  000001111221 


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccccccCEEEEeCCeeEec--ccccccccCCCchHHHHhhccHHH-HHHHhhc
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFAT--PETLIGFHPDAGASFYLSHLPGHL-GEFLALT  196 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~--Pe~~iGl~P~~G~s~~L~rl~g~~-a~~l~lt  196 (350)
                         ...+.....|+|+++-|.|.|||...+++||++++.+++.+.+  |.+--+..+..+........+... +.  -.+
T Consensus       173 ---~a~ls~~~VP~Isvv~G~~~gGgAy~~~~~~~i~~~~~a~i~~~Gp~vv~~~~~~~~~~~~~~~ei~~~~ge--~~~  247 (287)
T d1pixa2         173 ---NAELNQLGIPVIVGIYGTNPAGGGYHSISPTVIIAHEKANMAVGGAGIMGGMNPKGHVDLEYANEIADMVDR--TGK  247 (287)
T ss_dssp             ---HHHHHHTTCCEEEEECSEEETHHHHHHHSSSEEEEETTCEEESCCCTTCCSCCSSSSCCHHHHHHHHHHHHT--TCC
T ss_pred             ---HHHHhhcCCCeEEEecCCccccceeccccceeEEecCCeEEEEECHHHhcccchhhhhhhhhHHHHHhhhcc--ccc
Confidence               2335567899999999999999988888888888888887665  333233333332221111111111 11  123


Q ss_pred             CCCCCHHHHH--HCCCCccccCCC
Q 018834          197 GAKLNGAEMM--ACGLATHYSVSE  218 (350)
Q Consensus       197 G~~l~a~eA~--~~GLv~~vv~~~  218 (350)
                      -+.+.+.+..  ..|.+|.+++++
T Consensus       248 ~eeLGGa~~H~~~sG~~d~v~~~e  271 (287)
T d1pixa2         248 TEPPGAVDIHYTETGFMREVYASE  271 (287)
T ss_dssp             CCCSSBHHHHTTTSCCSCEEESSH
T ss_pred             ccccccHHHhhhhcccceeecCCH
Confidence            4455555543  579999998875

>d1vrga2 c.14.1.4 (A:252-515) Propionyl-CoA carboxylase complex B subunit, PccB {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Thermotoga maritima [TaxId: 2336]

Probab=96.29  E-value=0.025  Score=48.95  Aligned_cols=160  Identities=12%  Similarity=0.118  Sum_probs=100.0

Q ss_pred             eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      .|...-|.-|+|. ...+++.+-.+...+.++.++.. ++-.|.|.-. .+|-.|-+-.             .....+..
T Consensus        65 ~G~~vgvian~~~~~~G~~~~~~a~Kaa~fi~lc~~~-~iPli~l~Dt-pGf~~G~~~E-------------~~g~~~~g  129 (264)
T d1vrga2          65 QGKTVGIVANQPSVLAGVLDIDSSDKAARFIRFLDAF-NIPILTFVDT-PGYLPGVAQE-------------HGGIIRHG  129 (264)
T ss_dssp             TTEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHH
T ss_pred             cCceEEEEeccccccccchhhhhHHHHHHHHHHHHHh-CCceEEEeec-ccccccHHHH-------------HHhHHHHH
Confidence            3443334445655 33579999999999999988875 5777766543 3455553221             12345666


Q ss_pred             HHHHHHHhcCCCcEEEEECCccccccc-cc---ccccCEEEEeCCeeEecccccccccCCCchHHHHhhcc-H------H
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGA-GV---SIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-G------H  188 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~-~L---al~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~-g------~  188 (350)
                      -++++.+.++..|.|+++=|.+.|||. .+   ++.+|++++.+++.++       +...-|+...+.+.- -      .
T Consensus       130 a~~~~a~a~~~vP~i~viir~~yG~g~~am~~~~~~~d~~~awP~a~~~-------vm~pe~aa~v~~~~~l~~~~~~~~  202 (264)
T d1vrga2         130 AKLLYAYSEATVPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGAANIIFKREIEASSNPEE  202 (264)
T ss_dssp             HHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHH
T ss_pred             HHHHHHHhcCCCCEEEEEeCCcccHHhhhccCCccCCCeeeeccceeEE-------ecCHHHhhhhhhhhhhhhhhCcHH
Confidence            778899999999999999999999875 22   2358888887776655       443333333333211 0      0


Q ss_pred             H--HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          189 L--GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       189 ~--a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                      .  ...-.+.-+.-++..+...|++|.|+++.+...
T Consensus       203 ~~~~~~~~~~e~~~~~~~aa~~g~iD~VIdP~dTR~  238 (264)
T d1vrga2         203 TRRKLIEEYKQQFANPYIAASRGYVDMVIDPRETRK  238 (264)
T ss_dssp             HHHHHHHHHHHHTSSHHHHHHTTSSSEECCGGGHHH
T ss_pred             HHHHHHHHHHHHhcCHHHHHHcCCCCeeECHHHHHH
Confidence            0  000001112236778888999999998877653

>d1on3a2 c.14.1.4 (A:261-524) Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) {Propionibacterium freudenreichii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S)
species: Propionibacterium freudenreichii [TaxId: 1744]

Probab=96.04  E-value=0.025  Score=48.98  Aligned_cols=159  Identities=16%  Similarity=0.102  Sum_probs=99.1

Q ss_pred             CCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHH
Q 018834           42 ANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLY  120 (350)
Q Consensus        42 ~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~  120 (350)
                      |...-|.=|+|. ...+++.+-.+...+.++.++.- ++-+|.|.-. .+|..|-+-.             ....++..-
T Consensus        66 G~~vgvian~~~~~~G~~~~~~a~Kaarfi~lc~~~-~iPlv~l~D~-pGf~~G~~~E-------------~~g~i~~ga  130 (264)
T d1on3a2          66 GRSVGIVANQPSVMSGCLDINASDKAAEFVNFCDSF-NIPLVQLVDV-PGFLPGVQQE-------------YGGIIRHGA  130 (264)
T ss_dssp             TEEEEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHHH
T ss_pred             cceEEEEeccchhcccccChHHHHHHHHHHHHHHhc-CCceEEEecc-ccccccHHHH-------------HHHHHHHHH
Confidence            433333445555 35789999999999999988874 6777776543 4455553321             123456667


Q ss_pred             HHHHHHhcCCCcEEEEECCcccccccc-cc---cccCEEEEeCCeeEecccccccccCCCchHHHHhhcc-H----HH--
Q 018834          121 SFIYLLGTHLKPHVAILNGVTMGGGAG-VS---IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLP-G----HL--  189 (350)
Q Consensus       121 ~l~~~i~~~~kP~Ia~i~G~~~GgG~~-La---l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~-g----~~--  189 (350)
                      +++.++.++..|.|+++=|.+.|+|.. ++   ..+|++++.+++.++       ..+.-|+...+-+.- .    ..  
T Consensus       131 ~~~~a~a~~~vP~itvi~rkayG~g~~am~g~~~~~d~~~aWP~A~~~-------vMg~Egaa~v~~~~el~a~~~~~~~  203 (264)
T d1on3a2         131 KMLYAYSEATVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGAANVIFRKEIKAADDPDAM  203 (264)
T ss_dssp             HHHHHHHHCCSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHH
T ss_pred             HHHHHHHcCCCCEEEEEeccccCccccccccccCChhheeeHHhhHhh-------hccHHHHHHHHHhhhhhhhhhhhhh
Confidence            789999999999999999999998753 32   346777776666554       544444444443311 0    00  


Q ss_pred             -HH-HHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          190 -GE-FLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       190 -a~-~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                       .. .--..-+.-++..+...|.+|.|+++.+...
T Consensus       204 ~~~~~~e~~~~~~~p~~aA~~g~iD~VIdP~eTR~  238 (264)
T d1on3a2         204 RAEKIEEYQNAFNTPYVAAARGQVDDVIDPADTRR  238 (264)
T ss_dssp             HHHHHHHHHHHHSSHHHHHHTTSSSEECCGGGHHH
T ss_pred             hHHHHHHHHHHhcCHHHHHHcCCCCeeECHHHHHH
Confidence             00 0001111235667788999999998877543

>d2a7sa2 c.14.1.4 (A:278-548) Propionyl-CoA carboxylase complex B subunit, PccB {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.00  E-value=0.031  Score=48.57  Aligned_cols=160  Identities=15%  Similarity=0.164  Sum_probs=101.6

Q ss_pred             eCCEEEEEEcCCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPSA-LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~~-~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +|...-|.-|+|.. ..+++.+-.....+.++.++.. ++-+|.|.-. .+|..|-+.             +.....+..
T Consensus        68 ~G~~vgvian~~~~~~G~~~~~~~~Ka~rfi~lc~~~-~iPlv~l~dt-pGf~~G~~~-------------E~~g~~~~g  132 (271)
T d2a7sa2          68 DGRPVGIVANQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQ-------------EYNGIIRRG  132 (271)
T ss_dssp             SSCEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHH-------------HHHCHHHHH
T ss_pred             CCeEEEEEeccccccCCCcCHHHHHHHHHHHHHHHHh-CCceEEeech-hhhhhhccH-------------HHhhHHHHH
Confidence            44444455566653 2589999999999999998875 6777777543 445555322             122345566


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccc----cccccCEEEEeCCeeEecccccccccCCCchHHHHhhc-cHH------
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAG----VSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHL-PGH------  188 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~----Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl-~g~------  188 (350)
                      -++++++.++..|.|+++=|.+.|||..    -++.+|++++.+++.++       +.+.-|+...+.+. ...      
T Consensus       133 a~~~~a~a~~~vP~isvi~~~~~G~~~~am~~~~~~~d~~~AwP~A~ig-------vMgpegaa~v~~~~~l~~~~~~~~  205 (271)
T d2a7sa2         133 AKLLYAYGEATVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIA-------VMGASGAVGFVYRQQLAEAAANGE  205 (271)
T ss_dssp             HHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTTTTTTGGGTSSC
T ss_pred             HHHHHHHHhCCCCeEEEEeCCccchhhhhhcccccccceEEEecceeEe-------ecCHHHHHHHHHHHhhhhhhhccc
Confidence            7788999999999999999999998743    23357888887777665       43333333333321 110      


Q ss_pred             -----H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          189 -----L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       189 -----~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                           . ....-..-..-++..+...|++|.|+++.+...
T Consensus       206 ~~~~~~~~~~~e~~e~~~~p~~aa~~g~iD~VIdP~dTR~  245 (271)
T d2a7sa2         206 DIDKLRLRLQQEYEDTLVNPYVAAERGYVDAVIPPSHTRG  245 (271)
T ss_dssp             CTTSSTTHHHHHHHTTTSBSHHHHHHTSSSEECCGGGHHH
T ss_pred             chHHHHHHHHHHHHHHhcCHHHHHHcCCCCeeECHHHHHH
Confidence                 0 011111223346677888899999999877654

>d1xnya2 c.14.1.4 (A:268-530) Propionyl-CoA carboxylase complex B subunit, PccB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Propionyl-CoA carboxylase complex B subunit, PccB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=95.92  E-value=0.034  Score=48.10  Aligned_cols=157  Identities=16%  Similarity=0.189  Sum_probs=99.2

Q ss_pred             eCCEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHH
Q 018834           41 KANSRMAILNRPS-ALNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTL  119 (350)
Q Consensus        41 ~~~v~~ItLnrp~-~~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~  119 (350)
                      +|...-|.-|+|. .-.+++.+-.....+.++.++.. ++-+|.|.-. .+|-.|-+-.             .....+..
T Consensus        63 ~G~~vgvia~~~~~~~G~~~~~~a~Ka~~fi~lc~~~-~iPli~l~d~-pGf~~G~~~E-------------~~g~~~~g  127 (263)
T d1xnya2          63 EGRPVGIVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDV-PGFLPGVDQE-------------HDGIIRRG  127 (263)
T ss_dssp             TTEEEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHH-------------HTTHHHHH
T ss_pred             ccceEEEEecccceecCCcchhhHHHHHHHHHHHHHh-CCceEEeecc-cccccchhHH-------------HHhHHHHH
Confidence            3443334445554 34689999999999999988875 5677766543 3355553221             12245666


Q ss_pred             HHHHHHHhcCCCcEEEEECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhhccH--------
Q 018834          120 YSFIYLLGTHLKPHVAILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPG--------  187 (350)
Q Consensus       120 ~~l~~~i~~~~kP~Ia~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g--------  187 (350)
                      -++++++.++..|.|+++=|.+.|||....    +..|++++.+++.++       +.+.-|+...+.+.-.        
T Consensus       128 a~~~~a~a~~~vPkitvi~~~~~Gga~~~m~~~~~~~d~~~awP~a~~g-------vm~pe~aa~il~~~~~~~a~~~~~  200 (263)
T d1xnya2         128 AKLIFAYAEATVPLITVITRKAFGGAYDVMGSKHLGADLNLAWPTAQIA-------VMGAQGAVNILHRRTIADAGDDAE  200 (263)
T ss_dssp             HHHHHHHHHCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHSCCTTCS
T ss_pred             HHHHHHHHccCCCeEEEEecCccccceeccCCcccCCcEEEEcchhhhh-------ccCHHHHHHHHHHHHHhhhccchH
Confidence            778899999999999999999999875432    246888888776655       4433444443332110        


Q ss_pred             ---H-H-HHHHhhcCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          188 ---H-L-GEFLALTGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       188 ---~-~-a~~l~ltG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                         . . ..+.-   ...++..+...|.+|.|+++.+...
T Consensus       201 ~~~~~~~~~~~~---~~~~p~~aA~~g~iD~VIdP~dTR~  237 (263)
T d1xnya2         201 ATRARLIQEYED---ALLNPYTAAERGYVDAVIMPSDTRR  237 (263)
T ss_dssp             SSHHHHHHHHHH---HHSSSHHHHHHTSSSEECCGGGHHH
T ss_pred             HHHHHHHHHHHH---HhcCHHHHHHcccCCcccCHHHHHH
Confidence               0 0 11110   1124566778899999999887653

>d1pixa3 c.14.1.4 (A:288-586) Glutaconyl-CoA decarboxylase A subunit {Acidaminococcus fermentans [TaxId: 905]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Glutaconyl-CoA decarboxylase A subunit
species: Acidaminococcus fermentans [TaxId: 905]

Probab=94.83  E-value=0.37  Score=42.04  Aligned_cols=148  Identities=16%  Similarity=0.051  Sum_probs=90.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCceEEEEEcCCCccccCCChhhHHHhhhcCChHHHHHHHHHHHHHHHHHhcCCCcEE
Q 018834           55 LNALNTNMGAKLNKLFKAWENDPNIGFVSMKGSGRAFCAGGDIVSLYHFMNQGKLEECKDFFRTLYSFIYLLGTHLKPHV  134 (350)
Q Consensus        55 ~Nal~~~m~~~L~~~l~~~~~d~~v~~vvl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~kP~I  134 (350)
                      .-+++.+-.....+.++.++.. ++-+|.|.=. .+|-.|-+-.             ....++..-+++.++.++..|.|
T Consensus        96 ~G~l~~~~a~K~~rfi~lc~~~-~iPlv~l~D~-pGf~~g~~~E-------------~~g~~r~ga~~~~a~~~~~VP~i  160 (299)
T d1pixa3          96 GGKLYRQGLVKMNEFVTLCARD-RLPIVWIQDT-TGIDVGNDAE-------------KAELLGLGQSLIYSIQTSHIPQF  160 (299)
T ss_dssp             TTEECHHHHHHHHHHHHHHHHT-TCCEEEEECC-CEECCSHHHH-------------HTTHHHHHHHHHHHHHTCCCCEE
T ss_pred             CCccCHHHHHHHHHHHHHHHHc-CCeEEEEEeC-CCcccchHHH-------------hhhHHHHHHHHHHHHHhhcceeE
Confidence            4678999999999999998875 5677766533 3355552211             12245556678888999999999


Q ss_pred             EEECCcccccccccc----cccCEEEEeCCeeEecccccccccCCCchHHHHhh-ccHHH-----------H--HHHh-h
Q 018834          135 AILNGVTMGGGAGVS----IPGTFRVACGKTVFATPETLIGFHPDAGASFYLSH-LPGHL-----------G--EFLA-L  195 (350)
Q Consensus       135 a~i~G~~~GgG~~La----l~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~r-l~g~~-----------a--~~l~-l  195 (350)
                      +++=|.+.|||....    ...|++++     ++.|-..+|..+.-|+...+.+ -....           .  ..+. -
T Consensus       161 svi~r~~~G~a~~am~g~~~~~~~~~~-----~awP~aeigvMg~E~aa~vl~~~el~~~~~~~~~~~e~~e~~~~~~~~  235 (299)
T d1pixa3         161 EITLRKGTAAAHYVLGGPQGNDTNAFS-----IGTAATEIAVMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQA  235 (299)
T ss_dssp             EEECSEEETTHHHHTTCTTCTTTEEEE-----EECTTCEEESSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred             EEEecccccccccccccCccCccccee-----cCCCccccccccchhhheeehhhhhhhhhhhhhhhhHHHHHHHHHHHH
Confidence            999999999885322    23343331     2234445566544444443322 11100           0  0000 0


Q ss_pred             cCCCCCHHHHHHCCCCccccCCCChHH
Q 018834          196 TGAKLNGAEMMACGLATHYSVSEKLPL  222 (350)
Q Consensus       196 tG~~l~a~eA~~~GLv~~vv~~~~l~~  222 (350)
                      .-+.-++..+...|++|.|+++.+...
T Consensus       236 ~~~~~sp~~aAs~~~iD~IIDP~dTR~  262 (299)
T d1pixa3         236 FYTKSRPKVCAELGLVDEIVDMNKIRG  262 (299)
T ss_dssp             HHHTTSHHHHHHHTSSSEECCTTTHHH
T ss_pred             HHHhcCHHHHHHhCCcCeeECHHHHHH
Confidence            012346778889999999999988654

>d1dcia_ c.14.1.3 (A:) Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.17  E-value=0.061  Score=46.31  Aligned_cols=51  Identities=8%  Similarity=-0.072  Sum_probs=45.4

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.+++.+++.++++..   .+++++++.|.+++..++.++|.
T Consensus       204 ~~~~a~~i~~~~p~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~d~  254 (275)
T d1dcia_         204 AFALAADISSKSPVAVQGSKINLIYSRD---HSVDESLDYMATWNMSMLQTQDI  254 (275)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHTSSHHH
T ss_pred             ccccccccccccHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            4456788899999999999999999998   89999999999999999888764

>d1hzda_ c.14.1.3 (A:) AUH protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: AUH protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.75  E-value=0.062  Score=46.19  Aligned_cols=53  Identities=11%  Similarity=0.123  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          289 PWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       289 ~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +++.+..+.+.+.||.+++.++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       196 ~~a~~~a~~i~~~~p~a~~~~K~~l~~~~~---~~~~~~l~~e~~~~~~~~~s~d~  248 (266)
T d1hzda_         196 RKALDLAREFLPQGPVAMRVAKLAINQGME---VDLVTGLAIEEACYAQTIPTKDR  248 (266)
T ss_dssp             HHHHHHHHTTTTSCHHHHHHHHHHHHHHHT---SCHHHHHHHHHHHHHTTTTCHHH
T ss_pred             HHHHHHHHhcccCChHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            456667788889999999999999999998   89999999999999999888764

>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: 4-Chlorobenzoyl-CoA dehalogenase
species: Pseudomonas sp., strain CBS-3 [TaxId: 306]

Probab=91.07  E-value=0.19  Score=42.98  Aligned_cols=48  Identities=19%  Similarity=0.081  Sum_probs=43.6

Q ss_pred             HHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          294 TLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       294 ~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      ..+++.+.+|.+++.++++++++..   .+++++++.|.+.+.+.+.+||.
T Consensus       198 ~a~~la~~~~~a~~~~K~~l~~~~~---~~l~~~~~~e~~~~~~~~~~~~~  245 (269)
T d1nzya_         198 VARELAAAPTHLQVMAKERFHAGWM---QPVEECTEFEIQNVIASVTHPHF  245 (269)
T ss_dssp             HHHHHHHSCHHHHHHHHHHHHHHTT---SCHHHHHHHHHHHHHHHHHSTTH
T ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHhcCHHH
Confidence            4466788999999999999999998   89999999999999999999885

>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Thermus thermophilus [TaxId: 274]

Probab=90.67  E-value=0.17  Score=42.70  Aligned_cols=53  Identities=8%  Similarity=-0.059  Sum_probs=47.1

Q ss_pred             HHHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          289 PWCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       289 ~~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +++.+..+.+.+.+|.++..++++++++..   .+++++++.|.+.+..++.++|.
T Consensus       186 ~~a~~~a~~~~~~~~~a~~~~K~~l~~~~~---~~l~~~l~~e~~~~~~~~~s~d~  238 (253)
T d1uiya_         186 EEAKALAEEVAKNAPTSLRLTKELLLALPG---MGLEDGFRLAALANAWVRETGDL  238 (253)
T ss_dssp             HHHHHHHHHHHHSCHHHHHHHHHHHHHGGG---SCHHHHHHHHHHHHHHGGGCHHH
T ss_pred             hhHHHHHHhhcccchHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            455667788899999999999999999998   89999999999999999988764

>d1uyra1 c.14.1.4 (A:1482-1814) Acetyl-coenzyme A carboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Biotin dependent carboxylase carboxyltransferase domain
domain: Acetyl-coenzyme A carboxylase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.39  E-value=0.052  Score=48.29  Aligned_cols=69  Identities=14%  Similarity=0.154  Sum_probs=49.6

Q ss_pred             CCCcEEEEECCcccccccccccccCEEEEeCCeeEecccccccccCCCchHHHHhhccHHHHHHHhhcCCCC--CHHH--
Q 018834          129 HLKPHVAILNGVTMGGGAGVSIPGTFRVACGKTVFATPETLIGFHPDAGASFYLSHLPGHLGEFLALTGAKL--NGAE--  204 (350)
Q Consensus       129 ~~kP~Ia~i~G~~~GgG~~Lal~~D~riate~a~f~~Pe~~iGl~P~~G~s~~L~rl~g~~a~~l~ltG~~l--~a~e--  204 (350)
                      -..|+|+++.|.|.|+|.-++..||++|.++++.+.+.          |          ..+... ++|+.+  +.+|  
T Consensus       239 ~~iptis~v~G~~vG~gAyl~~L~d~vIm~~~s~i~lt----------G----------p~~l~~-~lG~eVy~s~~eLG  297 (333)
T d1uyra1         239 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILT----------G----------APAINK-MLGREVYTSNLQLG  297 (333)
T ss_dssp             HHSCEEEEESSCEETHHHHHHHHTCCEEEETTCCEESS----------C----------HHHHHH-HSSSCCCSCTHHHH
T ss_pred             CCCCEEEEEeCCccccceeecccccEEEEeCCceEEee----------C----------HHHHHH-hcCccccCChhHhC
Confidence            36999999999999999999999999999998755421          1          111221 345554  3222  


Q ss_pred             ----HHHCCCCccccCCC
Q 018834          205 ----MMACGLATHYSVSE  218 (350)
Q Consensus       205 ----A~~~GLv~~vv~~~  218 (350)
                          ..+.|.+|.++++|
T Consensus       298 G~~i~~~nGv~h~~a~dd  315 (333)
T d1uyra1         298 GTQIMYNNGVSHLTAVDD  315 (333)
T ss_dssp             SHHHHHHHTSSSEEESSH
T ss_pred             CHhHHhhCCCceEEeCCH
Confidence                35789999988865

>d1mj3a_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Enoyl-CoA hydratase (crotonase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.70  E-value=0.24  Score=41.80  Aligned_cols=51  Identities=10%  Similarity=0.035  Sum_probs=45.8

Q ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          291 CGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       291 a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      +.+..+.+.+.+|.++..++++++.+..   .+++++++.|.+.+...+.++|.
T Consensus       192 a~~~a~~i~~~~~~a~~~~K~~l~~~~~---~~l~~~l~~E~~~~~~~~~s~d~  242 (260)
T d1mj3a_         192 AIQCAEKIANNSKIIVAMAKESVNAAFE---MTLTEGNKLEKKLFYSTFATDDR  242 (260)
T ss_dssp             HHHHHHHHHHSCHHHHHHHHHHHHGGGS---SCHHHHHHHHHHHHHHGGGSHHH
T ss_pred             cccccccccchhhHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHhCCHHH
Confidence            4456678889999999999999999999   89999999999999999988874

>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Chromodomain protein CDY2A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.39  E-value=0.11  Score=44.29  Aligned_cols=50  Identities=10%  Similarity=0.002  Sum_probs=44.4

Q ss_pred             HHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCCc
Q 018834          293 STLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGGS  345 (350)
Q Consensus       293 ~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~~  345 (350)
                      +..+.+.+.||.++..++++++++..   .+++++++.|.+++.+++.+||.+
T Consensus       195 ~~a~~i~~~~~~a~~~~K~~~~~~~~---~~l~~~~~~e~~~~~~~~~s~d~~  244 (258)
T d2fw2a1         195 IQIKELASYNAIVLEECKALVRCNIK---LELEQANERECEVLRKIWSSAQGI  244 (258)
T ss_dssp             HHHHHHTTSCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHTSHHHH
T ss_pred             hhhhhhhhhhHHHHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHHH
Confidence            34567889999999999999999988   899999999999999999988753

>d1wz8a1 c.14.1.3 (A:2-264) Probable enoyl-CoA hydratase TTHA0218 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ClpP/crotonase
superfamily: ClpP/crotonase
family: Crotonase-like
domain: Probable enoyl-CoA hydratase TTHA0218
species: Thermus thermophilus [TaxId: 274]

Probab=80.14  E-value=0.87  Score=38.47  Aligned_cols=51  Identities=4%  Similarity=-0.222  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHhcCcHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhhhhhccCC
Q 018834          290 WCGSTLRLLKEASPLSLKVSLRSIREGGSGTNGGQGHCTKVESTKFGTSVRRHGG  344 (350)
Q Consensus       290 ~a~~~l~~~~~~sP~sl~~t~~~~~~~~~~~~~~~~e~l~~E~~~~~~~~~~~~~  344 (350)
                      ++.+..+++.+.||.++..+++++++...   ..+ +.++.|.+.....+.++|.
T Consensus       197 ~a~~~a~~la~~~~~al~~~K~~l~~~~~---~~~-~~~~~e~~~~~~~~~s~d~  247 (263)
T d1wz8a1         197 KALEVAERLAQGPKEALHHTKHALNHWYR---SFL-PHFELSLALEFLGFSGKEL  247 (263)
T ss_dssp             HHHHHHHHHHTSCHHHHHHHHHHHHHHHH---TTH-HHHHHHHHHHHHGGGSHHH
T ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHHHHh---ChH-HHHHHHHHHHHHHccCHHH
Confidence            45556678899999999999999998876   445 5689999999888888764