Citrus Sinensis ID: 018865


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MLSAVSRPIRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRPGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCCC
cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc
cEEEEcccccccccHHHHHHHHcccccccccccccHHHHHHHEEEEHHHHHHHHHcccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHccccccccccccccccEEEEcccccccccccccccccccccEEEEEEccEEEEEEEcccEEEccccccccccccccHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccccccEEEEEcccccccccccccccccHHHcHHHHEcccccccHccccccccccccccccccHHcEEEEcccc
mlsavsrpirdscapvldrcfrlvpcladparrssLGLKAALVTLHLVFVGVIFLFDSeliektkhepwyITFYLLLFVATLVQYFItsgsspgyVLDAMRHANERNALFQKIsttskqpasskngnmvitmegsrpgrsfsgsnatsWTKLVLdlyppgtsirsltcsycnveqpprakhchdcdrcvlqfdhhcvWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRripylrgipervypfsdgvcrnLYKLCCVKASvynlerlptaqeieekcrpytcldfltcrccc
mlsavsrpirdscapvlDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFqkisttskqpasskngnMVITMEGSRPGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILtnqttyelvrrrripylrgipervypfsdGVCRNLYKLCCVKASVYNLERlptaqeieekcrpyTCLDFLTCRCCC
MLSAVSRPIRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRPGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVimivlliilaislifllllllfhsylilTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCCC
***********SCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMR*********************************************TSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCC*
*****SRPIRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKIST*************************************VLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERL*************TCLDFLTCRCCC
********IRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKI***********NGNMVITMEGSRPGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCCC
MLSAVSRPIRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMR**NER**L*QKIS*********************RP*******NATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCCC
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLSAVSRPIRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRPGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCCC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query349 2.2.26 [Sep-21-2011]
Q7XA86340 Probable S-acyltransferas yes no 0.931 0.955 0.664 1e-111
Q9M1K5 477 Probable S-acyltransferas no no 0.507 0.371 0.333 2e-22
O80685411 Probable S-acyltransferas no no 0.561 0.476 0.321 2e-21
Q9SB58407 Probable S-acyltransferas no no 0.389 0.334 0.398 3e-21
Q9M306 476 Probable S-acyltransferas no no 0.449 0.329 0.350 2e-20
Q5PNZ1413 Probable S-acyltransferas no no 0.409 0.346 0.353 3e-20
Q0WQK2443 Probable S-acyltransferas no no 0.383 0.302 0.372 7e-20
B3DN87338 Probable S-acyltransferas no no 0.561 0.579 0.329 5e-19
Q552M6438 Putative ZDHHC-type palmi yes no 0.412 0.328 0.380 7e-19
Q9FLM3410 Probable S-acyltransferas no no 0.641 0.546 0.288 1e-18
>sp|Q7XA86|ZDH11_ARATH Probable S-acyltransferase At3g51390 OS=Arabidopsis thaliana GN=At3g51390 PE=2 SV=1 Back     alignment and function desciption
 Score =  402 bits (1033), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 220/331 (66%), Positives = 267/331 (80%), Gaps = 6/331 (1%)

Query: 18  DRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLL 77
           D+C   +PCL+DP RRSSL LK ALV LHLVF+G +FLFD+E IEKTK +PWY+  Y+LL
Sbjct: 16  DQCLLNLPCLSDPVRRSSLLLKLALVALHLVFIGFLFLFDAEFIEKTKRDPWYMGCYILL 75

Query: 78  FVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRP 137
           F ATL+QYF+TSGSSPGYV+DAMR   E +A+++  STTS Q AS K+ ++V+ +EG   
Sbjct: 76  FSATLLQYFVTSGSSPGYVVDAMRDVCEASAMYRNPSTTSIQHASRKSESVVVNVEGG-- 133

Query: 138 GRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCV 197
             S      T W KLVLDLYPPGTSIR+LTC YC+VEQPPR KHCHDCDRCVLQFDHHCV
Sbjct: 134 SASCPRRPPTPWGKLVLDLYPPGTSIRNLTCGYCHVEQPPRTKHCHDCDRCVLQFDHHCV 193

Query: 198 WLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAIS 257
           WLGTC+G  NH +FWW+ICEET LC+WT ++YV YL +N+A  WWK+ I+I+LL+ILAIS
Sbjct: 194 WLGTCIGQKNHSKFWWYICEETTLCIWTLIMYVDYL-SNVAKPWWKNAIIILLLVILAIS 252

Query: 258 LIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKAS 317
           LIF+LLLL+FHSYLILTNQ+TYELVRRRRIPY+R IP RV+PFS G+ RNLY +CC    
Sbjct: 253 LIFVLLLLIFHSYLILTNQSTYELVRRRRIPYMRNIPGRVHPFSRGIRRNLYNVCCGN-- 310

Query: 318 VYNLERLPTAQEIEEKCRPYTCLDFLTCRCC 348
            YNL+ LPTA E+E++ RPYTC+D L CRCC
Sbjct: 311 -YNLDSLPTAFELEDRSRPYTCIDMLKCRCC 340





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: -
>sp|Q9M1K5|ZDH13_ARATH Probable S-acyltransferase At3g56930 OS=Arabidopsis thaliana GN=At3g56930 PE=2 SV=1 Back     alignment and function description
>sp|O80685|ZDHC4_ARATH Probable S-acyltransferase At2g40990 OS=Arabidopsis thaliana GN=At2g40990 PE=2 SV=3 Back     alignment and function description
>sp|Q9SB58|ZDH19_ARATH Probable S-acyltransferase At4g24630 OS=Arabidopsis thaliana GN=At4g24630 PE=1 SV=2 Back     alignment and function description
>sp|Q9M306|ZDH10_ARATH Probable S-acyltransferase At3g48760 OS=Arabidopsis thaliana GN=At3g48760 PE=1 SV=2 Back     alignment and function description
>sp|Q5PNZ1|ZDH21_ARATH Probable S-acyltransferase At5g05070 OS=Arabidopsis thaliana GN=At5g05070 PE=2 SV=1 Back     alignment and function description
>sp|Q0WQK2|ZDHC9_ARATH Probable S-acyltransferase At3g26935 OS=Arabidopsis thaliana GN=At3g26935 PE=1 SV=1 Back     alignment and function description
>sp|B3DN87|ZDH12_ARATH Probable S-acyltransferase At3g56920 OS=Arabidopsis thaliana GN=At3g56920 PE=2 SV=1 Back     alignment and function description
>sp|Q552M6|ZDHC7_DICDI Putative ZDHHC-type palmitoyltransferase 7 OS=Dictyostelium discoideum GN=DDB_G0276017 PE=2 SV=1 Back     alignment and function description
>sp|Q9FLM3|ZDH23_ARATH Probable S-acyltransferase At5g41060 OS=Arabidopsis thaliana GN=At5g41060 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
255564059346 zinc finger protein, putative [Ricinus c 0.971 0.979 0.769 1e-156
224133934342 predicted protein [Populus trichocarpa] 0.954 0.973 0.751 1e-148
359496350332 PREDICTED: probable S-acyltransferase At 0.922 0.969 0.779 1e-143
297744936 454 unnamed protein product [Vitis vinifera] 0.902 0.693 0.780 1e-140
357483985345 Palmitoyltransferase ERF2 [Medicago trun 0.939 0.950 0.680 1e-128
449434102347 PREDICTED: probable S-acyltransferase At 0.982 0.988 0.669 1e-125
388497244326 unknown [Medicago truncatula] 0.882 0.944 0.647 1e-122
356538355341 PREDICTED: probable S-acyltransferase At 0.974 0.997 0.663 1e-120
18409331340 putative S-acyltransferase [Arabidopsis 0.931 0.955 0.664 1e-109
21593168340 unknown [Arabidopsis thaliana] 0.931 0.955 0.661 1e-108
>gi|255564059|ref|XP_002523028.1| zinc finger protein, putative [Ricinus communis] gi|223537750|gb|EEF39370.1| zinc finger protein, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 261/339 (76%), Positives = 299/339 (88%)

Query: 10  RDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPW 69
           R+SC   L  C+RL PCLADPARRS+LGLK ALV LHL++VG++F+FD +LIEK + EPW
Sbjct: 8   RESCHGALHGCYRLFPCLADPARRSALGLKVALVMLHLIYVGILFIFDDDLIEKARQEPW 67

Query: 70  YITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMV 129
           YI  YLLLFVATLVQYF T+ SSPGYVLDAMR  N++NA F K S  SKQPASSKNG+++
Sbjct: 68  YIVLYLLLFVATLVQYFATACSSPGYVLDAMRGLNDKNAAFAKASIPSKQPASSKNGSLI 127

Query: 130 ITMEGSRPGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCV 189
           IT++ SR G++ SGSN TSWTK+VLD+YPPGTS+R+LTCSYCNVEQPPRAKHCHDCD+CV
Sbjct: 128 ITVDESRSGKTSSGSNITSWTKIVLDMYPPGTSVRTLTCSYCNVEQPPRAKHCHDCDKCV 187

Query: 190 LQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIV 249
           LQFDHHCVWLGTC+G  NHCRFWW+ICEET LCLWTG+LY+AYLKANI  AWWKD IMI+
Sbjct: 188 LQFDHHCVWLGTCIGQGNHCRFWWYICEETTLCLWTGILYIAYLKANITRAWWKDAIMII 247

Query: 250 LLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLY 309
           LL+ L+I+ IFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFS G CRNLY
Sbjct: 248 LLVTLSIASIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGACRNLY 307

Query: 310 KLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCC 348
           + CCV++S+YNLERLPT  E+EEK RPYTCLDFLTCRCC
Sbjct: 308 EFCCVRSSLYNLERLPTPIELEEKSRPYTCLDFLTCRCC 346




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133934|ref|XP_002327715.1| predicted protein [Populus trichocarpa] gi|222836800|gb|EEE75193.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359496350|ref|XP_002270981.2| PREDICTED: probable S-acyltransferase At3g51390 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297744936|emb|CBI38475.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357483985|ref|XP_003612279.1| Palmitoyltransferase ERF2 [Medicago truncatula] gi|355513614|gb|AES95237.1| Palmitoyltransferase ERF2 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449434102|ref|XP_004134835.1| PREDICTED: probable S-acyltransferase At3g51390-like [Cucumis sativus] gi|449491275|ref|XP_004158847.1| PREDICTED: probable S-acyltransferase At3g51390-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|388497244|gb|AFK36688.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356538355|ref|XP_003537669.1| PREDICTED: probable S-acyltransferase At3g51390-like [Glycine max] Back     alignment and taxonomy information
>gi|18409331|ref|NP_566950.1| putative S-acyltransferase [Arabidopsis thaliana] gi|75232248|sp|Q7XA86.1|ZDH11_ARATH RecName: Full=Probable S-acyltransferase At3g51390; AltName: Full=Probable palmitoyltransferase At3g51390; AltName: Full=Zinc finger DHHC domain-containing protein At3g51390 gi|33589688|gb|AAQ22610.1| At3g51390 [Arabidopsis thaliana] gi|332645266|gb|AEE78787.1| putative S-acyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21593168|gb|AAM65117.1| unknown [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
TAIR|locus:2081795340 AT3G51390 [Arabidopsis thalian 0.931 0.955 0.595 1e-109
ZFIN|ZDB-GENE-070705-356270 zdhhc12b "zinc finger, DHHC-ty 0.449 0.581 0.329 1.3e-25
ZFIN|ZDB-GENE-081104-40270 zdhhc12a "zinc finger, DHHC-ty 0.449 0.581 0.333 4.4e-25
UNIPROTKB|Q96GR4267 ZDHHC12 "Probable palmitoyltra 0.495 0.647 0.329 1e-23
UNIPROTKB|Q5T269281 ZDHHC12 "Probable palmitoyltra 0.495 0.615 0.329 1.8e-22
UNIPROTKB|E1B6X9268 ZDHHC12 "Uncharacterized prote 0.406 0.529 0.326 1.8e-22
UNIPROTKB|E2RQ98283 ZDHHC12 "Uncharacterized prote 0.406 0.501 0.333 1.2e-21
UNIPROTKB|F1NH43266 ZDHHC12 "Uncharacterized prote 0.429 0.563 0.320 1.6e-21
RGD|1306593267 Zdhhc12 "zinc finger, DHHC-typ 0.406 0.531 0.326 2.4e-21
UNIPROTKB|Q6DGF5267 Zdhhc12 "Probable palmitoyltra 0.406 0.531 0.326 2.4e-21
TAIR|locus:2081795 AT3G51390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
 Identities = 197/331 (59%), Positives = 239/331 (72%)

Query:    18 DRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLL 77
             D+C   +PCL+DP RRSSL LK ALV LHLVF+G +FLFD+E IEKTK +PWY+  Y+LL
Sbjct:    16 DQCLLNLPCLSDPVRRSSLLLKLALVALHLVFIGFLFLFDAEFIEKTKRDPWYMGCYILL 75

Query:    78 FVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRP 137
             F ATL+QYF+TSGSSPGYV+DAMR   E +A+++  STTS Q AS K+ ++V+ +EG   
Sbjct:    76 FSATLLQYFVTSGSSPGYVVDAMRDVCEASAMYRNPSTTSIQHASRKSESVVVNVEGG-- 133

Query:   138 GRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCV 197
               S      T W KLVLDLYPPGTSIR+LTC YC+VEQPPR KHCHDCDRCVLQFDHHCV
Sbjct:   134 SASCPRRPPTPWGKLVLDLYPPGTSIRNLTCGYCHVEQPPRTKHCHDCDRCVLQFDHHCV 193

Query:   198 WLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVXXXXXXXXXXXX 257
             WLGTC+G  NH +FWW+ICEET LC+WT ++YV YL +N+A  WWK+             
Sbjct:   194 WLGTCIGQKNHSKFWWYICEETTLCIWTLIMYVDYL-SNVAKPWWKNAIIILLLVILAIS 252

Query:   258 XXXXXXXXXXXXXXXXTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKAS 317
                             TNQ+TYELVRRRRIPY+R IP RV+PFS G+ RNLY +CC    
Sbjct:   253 LIFVLLLLIFHSYLILTNQSTYELVRRRRIPYMRNIPGRVHPFSRGIRRNLYNVCCGN-- 310

Query:   318 VYNLERLPTAQEIEEKCRPYTCLDFLTCRCC 348
              YNL+ LPTA E+E++ RPYTC+D L CRCC
Sbjct:   311 -YNLDSLPTAFELEDRSRPYTCIDMLKCRCC 340




GO:0005634 "nucleus" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0008270 "zinc ion binding" evidence=IEA
GO:0005774 "vacuolar membrane" evidence=IDA
ZFIN|ZDB-GENE-070705-356 zdhhc12b "zinc finger, DHHC-type containing 12b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-081104-40 zdhhc12a "zinc finger, DHHC-type containing 12a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q96GR4 ZDHHC12 "Probable palmitoyltransferase ZDHHC12" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5T269 ZDHHC12 "Probable palmitoyltransferase ZDHHC12" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1B6X9 ZDHHC12 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RQ98 ZDHHC12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NH43 ZDHHC12 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|1306593 Zdhhc12 "zinc finger, DHHC-type containing 12" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q6DGF5 Zdhhc12 "Probable palmitoyltransferase ZDHHC12" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XA86ZDH11_ARATH2, ., 3, ., 1, ., -0.66460.93120.9558yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00011882001
SubName- Full=Chromosome undetermined scaffold_345, whole genome shotgun sequence; (349 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
pfam01529167 pfam01529, zf-DHHC, DHHC palmitoyltransferase 4e-33
COG5273309 COG5273, COG5273, Uncharacterized protein containi 7e-22
>gnl|CDD|216554 pfam01529, zf-DHHC, DHHC palmitoyltransferase Back     alignment and domain information
 Score =  120 bits (302), Expect = 4e-33
 Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 6/137 (4%)

Query: 155 DLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWF 214
           +            CS CN+ +PPR+ HC  C+RCVL+FDHHC WL  C+G  NH  F  F
Sbjct: 31  ESEEGDEEDELKFCSTCNIIKPPRSHHCRVCNRCVLRFDHHCPWLNNCIGRRNHKYFLLF 90

Query: 215 ICEETALCLWTGVLYVAYLKANIALAWWKDVIM------IVLLIILAISLIFLLLLLLFH 268
           +   T   +   VL   YL   I        ++      I+LL++    L+FL  LL FH
Sbjct: 91  LLYLTLYLILLLVLSFYYLVYLIRNIELFFFLILSLFSSIILLVLSLFFLLFLSFLLFFH 150

Query: 269 SYLILTNQTTYELVRRR 285
            YLIL N TTYE ++++
Sbjct: 151 LYLILKNITTYEYIKKK 167


This family includes the well known DHHC zinc binding domain as well as three of the four conserved transmembrane regions found in this family of palmitoyltransferase enzymes. Length = 167

>gnl|CDD|227598 COG5273, COG5273, Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 349
KOG1314414 consensus DHHC-type Zn-finger protein [General fun 100.0
KOG1315307 consensus Predicted DHHC-type Zn-finger protein [G 100.0
KOG1311299 consensus DHHC-type Zn-finger proteins [General fu 100.0
PF01529174 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 100.0
KOG1313309 consensus DHHC-type Zn-finger proteins [General fu 100.0
COG5273309 Uncharacterized protein containing DHHC-type Zn fi 100.0
KOG0509600 consensus Ankyrin repeat and DHHC-type Zn-finger d 99.97
KOG1312341 consensus DHHC-type Zn-finger proteins [General fu 99.96
COG5273309 Uncharacterized protein containing DHHC-type Zn fi 94.78
PF01529174 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR0 92.81
PF1324023 zinc_ribbon_2: zinc-ribbon domain 83.67
KOG1311299 consensus DHHC-type Zn-finger proteins [General fu 82.18
KOG1314 414 consensus DHHC-type Zn-finger protein [General fun 80.75
>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only] Back     alignment and domain information
Probab=100.00  E-value=1.3e-45  Score=340.18  Aligned_cols=227  Identities=26%  Similarity=0.493  Sum_probs=172.2

Q ss_pred             cHHHHHHHHHHHHHHHHHHHHhccCCCccCcccccchhhhHhhhccccCCCCCCCCCCCCccccccCCCCCCCCCCCCcc
Q 018865           68 PWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRPGRSFSGSNAT  147 (349)
Q Consensus        68 ~~~~~i~~~l~~l~l~~y~~~~~~dPG~vp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (349)
                      ....+.|.+.-.|++++|+.+++++||++|.+|+++..+++.+                                     
T Consensus        48 ~~n~i~f~~~~~m~~~ny~~A~~~gPG~vp~~wkPe~~~D~~~-------------------------------------   90 (414)
T KOG1314|consen   48 VPNQITFLLWTSMILYNYFNAIFTGPGFVPLGWKPENPKDEMF-------------------------------------   90 (414)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCChhHHH-------------------------------------
Confidence            3355677777889999999999999999999998653333221                                     


Q ss_pred             hhhhhhhhcCCCCCcccceecccCccccCCCCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 018865          148 SWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGV  227 (349)
Q Consensus       148 ~~~~~~~~~~~~g~~~~~~~C~~C~~~kP~Rs~HC~~C~~CV~r~DHHC~Wv~nCIG~~N~r~F~~fl~~~~~~~~~~~~  227 (349)
                                       .+||.+|+.+|+||||||+.|||||.+|||||||+|||||..||.+|+.||++..++|+-..+
T Consensus        91 -----------------lqfCk~CqgYKapRSHHCrkCnrCvmkMDHHCPWinnCVG~aNh~~F~~FLlf~ivG~ih~ti  153 (414)
T KOG1314|consen   91 -----------------LQFCKKCQGYKAPRSHHCRKCNRCVMKMDHHCPWINNCVGWANHAYFLRFLLFSIVGCIHGTI  153 (414)
T ss_pred             -----------------HHHHhhccCcCCCccccchHHHHHHHhhccCCcchhhcccccccHHHHHHHHHHHHhccccee
Confidence                             179999999999999999999999999999999999999999999999999999887765444


Q ss_pred             HHHHHHHhhhhhHHH----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHh----hccc
Q 018865          228 LYVAYLKANIALAWW----------------KDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVR----RRRI  287 (349)
Q Consensus       228 ~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~l~~~h~~li~~n~TT~E~~~----~~r~  287 (349)
                      +.+..++..+...|.                .....++.+.+++...+.+++|++.|+..|.+|+|.+|.+.    ..|.
T Consensus       154 I~~~~~~~~Iy~~W~~~~g~~hlp~v~ft~~~li~~vfslgla~gv~la~t~Lf~~qlk~Il~nrt~IE~wi~~Ka~~rr  233 (414)
T KOG1314|consen  154 ILVCAQYRGIYFRWYIKYGLRHLPIVFFTLSSLIALVFSLGLAIGVVLALTMLFFIQLKQILNNRTGIESWIVEKAMDRR  233 (414)
T ss_pred             eehhHHHHHHHHHHHhhcccccCceeeccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Confidence            333222222222221                11122233344556667778999999999999999999876    2233


Q ss_pred             ccccCC--CCccCCCCHhHHHHHHHhhccC----CCCcce-------------ecCCChhhhhhccCCceEeeccCcccc
Q 018865          288 PYLRGI--PERVYPFSDGVCRNLYKLCCVK----ASVYNL-------------ERLPTAQEIEEKCRPYTCLDFLTCRCC  348 (349)
Q Consensus       288 ~~~~~~--~~~~npy~~G~~~Nl~~~~~~~----~~~~~~-------------~~lp~~~~~~~~~~~~~~~~~~~~~~~  348 (349)
                      ++....  .+...|||.||+.|++++++..    ++.-+|             +++.+..+++.+.+.|.|....||+||
T Consensus       234 ~~~~~d~~~~f~ypydlgWr~n~r~vf~~~~~~~gdg~~wPv~~gc~qytlt~eql~qk~~kr~rsr~~~~~~~~tG~~~  313 (414)
T KOG1314|consen  234 EYYFNDDEGEFTYPYDLGWRINLREVFFQNKKEEGDGIEWPVVEGCVQYTLTIEQLTQKLDKRGRSRLFKCIEDVTGDCC  313 (414)
T ss_pred             HhhccCCCCceeeeccccccccHHHHhhhccccCCCCccccccCcccccceeHHHHHHHHHhhcCeEEEEeccCCCCCcc
Confidence            343333  4557899999999999987764    444333             344478899999999999999999998



>KOG1315 consensus Predicted DHHC-type Zn-finger protein [General function prediction only] Back     alignment and domain information
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>KOG1313 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] Back     alignment and domain information
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] Back     alignment and domain information
>KOG1312 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>COG5273 Uncharacterized protein containing DHHC-type Zn finger [General function prediction only] Back     alignment and domain information
>PF01529 zf-DHHC: DHHC palmitoyltransferase; InterPro: IPR001594 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PF13240 zinc_ribbon_2: zinc-ribbon domain Back     alignment and domain information
>KOG1311 consensus DHHC-type Zn-finger proteins [General function prediction only] Back     alignment and domain information
>KOG1314 consensus DHHC-type Zn-finger protein [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00