Citrus Sinensis ID: 018869

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
Protein Sequence
MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFFL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccHHHHccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccHHHHHHHccccccEEEEEEEEcccccccHHHHHHHccccccEEEccccccccccccccccccHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHHccccEEEccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHcccccccccEEEEccccccccHHHHHHHHHccccEEEccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHcccEEEccccccHHHHccccccccccccHHHccccccccccccccccccccccccccccccccccccHHHHHHHcccccEEEEEcccccccccccHHHHHHHcEccccEEcccccccccccccccccccHHHHHHHHHHcccccccEEEEEcccccccHHHHHHHHHHcccccEEEEccHHHHHHHcccccEccccccccccccHHHHHHHHHHccccccccEEEEEccHHHHHcHHHHHHHHHccccEEEEccccccccccccccccccccccccccccccHHHHcccccccccHHHHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MASSLFTRRLVHSSFSISYKPQVFTSLLNkklfysrpkhthttlktsssqspcvmsslaagrradystlsvspkepvvsVDWLhanlrepdlkvldaswympdeqrnpfqeyqvahipgalffdvdgvadrttnlphmlpsEEAFAAAVSALGlenkdglvvydgKGIFSAARVWWMFRVFGHDrvwvldgglprwrasgydvessasGDAILKASAASEAIEKVYqgqvvgpttfqtkfqphLIWTLEQVKRNIEEGTYQLVDarskarfdgdapeprkgirsghvpgskcipfpqmldasqtllpaDELKKRFEQegislekpvvtacGTGVTACILALvlfpvffl
Flexible Loop (DISEMBL)
masslftrrlvhssfsisykpqVFTSLLNKKLFYSRPKHThttlktsssqspCVMSSLAAGRRADystlsvspkepvVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQlvdarskarfdgdapeprkgirsghvpGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFFL
Low Complexity Region (SEG)
MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPkhthttlktsssqsPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFFL
Disordered region (IsUnstruct)
******TRRLVHSSFSISYKPQVFTSLLNKKLFYS****************************************PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE*****DAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVD****************************************************QEGISLEKPVVTACGTGVTACILALVLFPVFF*
Disordered Region (DISOPRED)
********RLVHSSFSISYKPQVFTSLLNKKLF*****************************************EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFFL
Disordered Region (DISEMBL)
********RLVHSSFSISYKPQVFTSLLNKKLFYSRP*******************SLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG*********DAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFFL
Disordered Region (DISPRO)
*ASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKT**************************P*EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFFL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFFL
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	349	2.2.26 [Sep-21-2011]
O64530	379	Thiosulfate/3-mercaptopyr	yes	no	0.979	0.902	0.714	1e-147
Q24JL3	342	Thiosulfate/3-mercaptopyr	no	no	0.828	0.845	0.742	1e-130
P25325	297	3-mercaptopyruvate sulfur	yes	no	0.699	0.821	0.398	1e-51
P97532	297	3-mercaptopyruvate sulfur	yes	no	0.707	0.831	0.394	6e-51
Q99J99	297	3-mercaptopyruvate sulfur	yes	no	0.707	0.831	0.386	3e-50
P58388	281	3-mercaptopyruvate sulfur	N/A	no	0.699	0.868	0.378	2e-47
P31142	281	3-mercaptopyruvate sulfur	N/A	no	0.699	0.868	0.378	2e-47
P46635	297	Thiosulfate sulfurtransfe	no	no	0.704	0.828	0.392	8e-46
P00586	297	Thiosulfate sulfurtransfe	no	no	0.704	0.828	0.396	2e-45
P24329	297	Thiosulfate sulfurtransfe	no	no	0.704	0.828	0.389	2e-45

>sp|O64530|STR1_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial OS=Arabidopsis thaliana GN=STR1 PE=1 SV=1

 Score =  520 bits (1340), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/347 (71%), Positives = 288/347 (82%), Gaps = 5/347 (1%)

Query: 1   MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTH----TTLKTSSSQSPCVMS 56
           MAS+LF+R  + +S  +   P +   + N   F SR  H+     +T   S++ +   M+
Sbjct: 1   MASTLFSRTFLAASHRL-ITPSLPQKIFNPATFLSRSLHSQLGSASTAYKSTTWARRAMA 59

Query: 57  SLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAH 116
           S     +A YST SVS  EPVVSVDWLHANLREPDLK+LDASWYMPDEQRNP QEYQVAH
Sbjct: 60  STGVETKAGYSTSSVSTSEPVVSVDWLHANLREPDLKILDASWYMPDEQRNPIQEYQVAH 119

Query: 117 IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWW 176
           IP ALFFD+DG++DR T+LPHMLP+EEAFAA  SALG++NKD +VVYDGKGIFSAARVWW
Sbjct: 120 IPRALFFDLDGISDRKTSLPHMLPTEEAFAAGCSALGIDNKDEVVVYDGKGIFSAARVWW 179

Query: 177 MFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTF 236
           MFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK+YQGQ V P TF
Sbjct: 180 MFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKIYQGQTVSPITF 239

Query: 237 QTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFP 296
           QTKFQPHL+WTL+QVK N+E+ TYQ +DARSKARFDG APEPRKGIRSGH+PGSKCIPFP
Sbjct: 240 QTKFQPHLVWTLDQVKNNMEDPTYQHIDARSKARFDGTAPEPRKGIRSGHIPGSKCIPFP 299

Query: 297 QMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           QM D+  TLLPA+ELKKRF+QE ISL+KP++ +CGTGVTACILA+ L
Sbjct: 300 QMFDSCNTLLPAEELKKRFDQEDISLDKPIMASCGTGVTACILAMGL 346

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 8EC: .EC: 1EC: .EC: 2

>sp|Q24JL3|STR2_ARATH Thiosulfate/3-mercaptopyruvate sulfurtransferase 2 OS=Arabidopsis thaliana GN=STR2 PE=1 SV=1

 Score =  466 bits (1199), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 216/291 (74%), Positives = 252/291 (86%), Gaps = 2/291 (0%)

Query: 54  VMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ 113
           VM+S  +  +A+Y+ +S +  EPVVSVDWLH+NL + D+KVLDASWYM  EQRNP QEYQ
Sbjct: 24  VMASSGSEAKANYAPISTN--EPVVSVDWLHSNLGDADIKVLDASWYMAHEQRNPIQEYQ 81

Query: 114 VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAAR 173
           VAHIPGALFFD++G+ADR TNL HMLPSEEAFAA  SALG+EN DG+VVYDG G+FSAAR
Sbjct: 82  VAHIPGALFFDLNGIADRKTNLRHMLPSEEAFAAGCSALGIENNDGVVVYDGMGLFSAAR 141

Query: 174 VWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP 233
           VWWMFRVFGHD+VWVLDGGLP+WRASGYDVESS S DAILKASAA+EAIEK+YQGQ + P
Sbjct: 142 VWWMFRVFGHDKVWVLDGGLPKWRASGYDVESSVSNDAILKASAATEAIEKIYQGQTISP 201

Query: 234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCI 293
            TFQTKF+PHL+  L+QVK NIE+ TYQ +DARSKARFDG APEP KG+ SGH+PGSKC+
Sbjct: 202 ITFQTKFRPHLVLALDQVKENIEDKTYQHIDARSKARFDGIAPEPWKGLPSGHIPGSKCV 261

Query: 294 PFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           PFP M D+SQTLLPA+ELKK+FEQE ISL+ P+  +CGTGVTACILAL L+
Sbjct: 262 PFPLMFDSSQTLLPAEELKKQFEQEDISLDSPIAASCGTGVTACILALGLY 312

Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3-mercaptopyruvate > thiosulfate. Involved in embryo and seed development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P25325|THTM_HUMAN 3-mercaptopyruvate sulfurtransferase OS=Homo sapiens GN=MPST PE=1 SV=3

 Score =  204 bits (518), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/271 (39%), Positives = 148/271 (54%), Gaps = 27/271 (9%)

Query: 77  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct: 10  LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLD 129

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GGL  W      + S  S  A                     P  F+ +  P  I T E 
Sbjct: 130 GGLRHWLRQNLPLSSGKSQPA---------------------PAEFRAQLDPAFIKTYED 168

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
           +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  IPF   L         +E
Sbjct: 169 IKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPEE 228

Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILAL 341
           ++  F+++ + L KP+V  CG+GVTAC +AL
Sbjct: 229 IRHLFQEKKVDLSKPLVATCGSGVTACHVAL 259

Transfer of a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P97532|THTM_RAT 3-mercaptopyruvate sulfurtransferase OS=Rattus norvegicus GN=Mpst PE=1 SV=3

 Score =  201 bits (511), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 108/274 (39%), Positives = 151/274 (55%), Gaps = 27/274 (9%)

Query: 77  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   L+ P     LK+LDASWY+P   R+  +E++  HIPGA FFD+D  +D T
Sbjct: 10  LVSAQWVAEALKSPRASQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLPS   FA    +LG+     +V+YDG  +G++SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPSATHFADYAGSLGVSAATHVVIYDGSDQGLYSAPRVWWMFRAFGHHSVSLLD 129

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W +    + S  S          SE            P  F  +  P  I T E 
Sbjct: 130 GGFRYWLSQNLPISSGKS---------PSE------------PAEFCAQLDPSFIKTHED 168

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
           +  N++   +Q+VDAR+  RF G  PEPR GI  GH+PGS  IPF + L +       +E
Sbjct: 169 ILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTSEGLEKSPEE 228

Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           +++ F+++ + L KP+V  CG+GVTAC + L  F
Sbjct: 229 IQRLFQEKKVDLSKPLVATCGSGVTACHVVLGAF 262

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|Q99J99|THTM_MOUSE 3-mercaptopyruvate sulfurtransferase OS=Mus musculus GN=Mpst PE=1 SV=3

 Score =  199 bits (506), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 106/274 (38%), Positives = 146/274 (53%), Gaps = 27/274 (9%)

Query: 77  VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  W+   L+ P     LK+LDASWY+P   R+  +E++  HIPGA FFD+D  +D T
Sbjct: 10  LVSAQWVAEALKAPRSSQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
           +   HMLP+   FA    +LG+     +V+YDG  +G +SA RVWWMFR FGH  V +LD
Sbjct: 70  SPYDHMLPNATHFADYAGSLGVSAATHVVIYDGSDQGPYSAPRVWWMFRAFGHHSVSLLD 129

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W      + S  S                        P  F  +  P  I T E 
Sbjct: 130 GGFRHWLNQNLPISSGKSHSE---------------------PAEFSAQLDPSFIKTHED 168

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
           +  N++   +Q+VDAR+  RF G  PEPR GI  GH+PGS  IPF + L         +E
Sbjct: 169 ILENLDARRFQVVDARAAGRFQGTQPEPRDGIEPGHIPGSVNIPFTEFLTNEGLEKSPEE 228

Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           +K+ F+++ + L KP+V  CG+GVTAC + L  F
Sbjct: 229 IKRLFKEKKVDLSKPLVATCGSGVTACHVVLGAF 262

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. May have a role in cyanide degradation or in thiosulfate biosynthesis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P58388|THTM_ECO57 3-mercaptopyruvate sulfurtransferase OS=Escherichia coli O157:H7 GN=sseA PE=3 SV=2

 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 147/267 (55%), Gaps = 23/267 (8%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 66

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 126

Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
           +            D +L    A E  E            F   F P  +  +  V     
Sbjct: 127 QR-----------DDLLLEEGAVELPEG----------EFNAAFNPEAVVKVTDVLLASH 165

Query: 257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 316
           E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++   + L   DEL   F 
Sbjct: 166 ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-LKTTDELDAIFF 224

Query: 317 QEGISLEKPVVTACGTGVTACILALVL 343
             G+S +KP++ +CG+GVTA ++ L L
Sbjct: 225 GRGVSYDKPIIVSCGSGVTAAVVLLAL 251

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity.

Escherichia coli O157:H7 (taxid: 83334)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P31142|THTM_ECOLI 3-mercaptopyruvate sulfurtransferase OS=Escherichia coli (strain K12) GN=sseA PE=1 SV=3

 Score =  190 bits (482), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/267 (37%), Positives = 147/267 (55%), Gaps = 23/267 (8%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 66

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 126

Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
           +            D +L    A E  E            F   F P  +  +  V     
Sbjct: 127 QR-----------DDLLLEEGAVELPEG----------EFNAAFNPEAVVKVTDVLLASH 165

Query: 257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 316
           E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++   + L   DEL   F 
Sbjct: 166 ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-LKTTDELDAIFF 224

Query: 317 QEGISLEKPVVTACGTGVTACILALVL 343
             G+S +KP++ +CG+GVTA ++ L L
Sbjct: 225 GRGVSYDKPIIVSCGSGVTAAVVLLAL 251

Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity (130-fold lower). Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity.

Escherichia coli (strain K12) (taxid: 83333)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 2

>sp|P46635|THTR_CRIGR Thiosulfate sulfurtransferase OS=Cricetulus griseus GN=TST PE=2 SV=2

 Score =  184 bits (467), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 108/275 (39%), Positives = 144/275 (52%), Gaps = 29/275 (10%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGSLGPGLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFADYVGSLGISNDTHVVVYDGDNLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 129 GGFRNWLKEGHPVTSEPSRPE---------------------PAVFKATLDRSLLKTYEQ 167

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPR-KGIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N++   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 168 VLENLQSKRFQLVDSRAQGRYLGTEPEPDIVGLDSGHIRGSANMPFMNFLTEDGFEKSPE 227

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           EL+  F+ + + L +P++  C  GVTAC +AL  +
Sbjct: 228 ELRAIFQDKKVDLSQPLIATCRKGVTACHIALAAY 262

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Formation of iron-sulfur complexes and cyanide detoxification. Binds molecular oxygen and sulfur.

Cricetulus griseus (taxid: 10029)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P00586|THTR_BOVIN Thiosulfate sulfurtransferase OS=Bos taurus GN=TST PE=1 SV=3

 Score =  183 bits (465), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/275 (39%), Positives = 143/275 (52%), Gaps = 29/275 (10%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 10  LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 129 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 167

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 168 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 227

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           EL+  FE + + L KP++  C  GVTAC +AL  +
Sbjct: 228 ELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAY 262

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Formation of iron-sulfur complexes and cyanide detoxification. Binds molecular oxygen and sulfur.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

>sp|P24329|THTR_RAT Thiosulfate sulfurtransferase OS=Rattus norvegicus GN=Tst PE=1 SV=3

 Score =  183 bits (464), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/275 (38%), Positives = 142/275 (51%), Gaps = 29/275 (10%)

Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EYQ  H+PGA FFD++   D T
Sbjct: 10  LVSTKWLAESIRSGKVGPSLRVLDASWYSPG-TRQARKEYQERHVPGASFFDIEECRDTT 68

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  F   V  LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 69  SPYEMMLPSEAHFGDYVGNLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 128

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 129 GGFRNWLKEGHPVTSEPSRPE---------------------PAVFKATLNRSLLKTYEQ 167

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N++   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 168 VLENLQSKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNVPFMNFLTEDGFEKSPE 227

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           EL+  F+ + + L +P++  C  GVTAC +AL  +
Sbjct: 228 ELRAIFQDKKVDLSQPLIATCRKGVTACHIALAAY 262

Together with MRPL18, acts as a mitochondrial import factor for the cytosolic 5S rRNA. Only the nascent unfolded cytoplasmic form is able to bind to the 5S rRNA (By similarity). Involved in the formation of iron-sulfur complexes, cyanide detoxification or modification of sulfur-containing enzymes. Other thiol compounds, besides cyanide, can act as sulfur ion acceptors. Also has weak mercaptopyruvate sulfurtransferase (MST) activity.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 8

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
225465012	380	PREDICTED: 3-mercaptopyruvate sulfurtran	0.979	0.9	0.784	1e-159
255544614	376	thiosulfate sulfertansferase, putative [	0.974	0.904	0.797	1e-158
118484746	372	unknown [Populus trichocarpa]	0.965	0.905	0.799	1e-158
388492146	384	unknown [Lotus japonicus]	0.982	0.893	0.772	1e-157
224096608	372	predicted protein [Populus trichocarpa]	0.965	0.905	0.796	1e-157
4406372	375	thiosulfate sulfurtransferase [Datisca g	0.979	0.912	0.775	1e-156
356525750	379	PREDICTED: 3-mercaptopyruvate sulfurtran	0.977	0.899	0.758	1e-154
358347396	381	Mercaptopyruvate sulfurtransferase-like	0.979	0.897	0.767	1e-152
449497667	377	PREDICTED: thiosulfate/3-mercaptopyruvat	0.979	0.907	0.735	1e-147
356557008	384	PREDICTED: 3-mercaptopyruvate sulfurtran	0.977	0.888	0.755	1e-147

>gi|225465012|ref|XP_002264748.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase [Vitis vinifera] gi|147820684|emb|CAN69823.1| hypothetical protein VITISV_030676 [Vitis vinifera] gi|297736153|emb|CBI24191.3| unnamed protein product [Vitis vinifera]

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 269/343 (78%), Positives = 300/343 (87%), Gaps = 1/343 (0%)

Query: 1   MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLAA 60
            A +LF  RL+ SS ++  KPQ+FTS  NK+ FYSRP   +   + SS  S C M+S  +
Sbjct: 6   FARTLFGNRLIRSSLALYQKPQIFTSFFNKRPFYSRPNAVYLVYR-SSGFSTCAMASSTS 64

Query: 61  GRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGA 120
           G R+ +ST SVSP EPVVSVDWLHAN+REPDLKVLDASWYMPDEQRNP QEYQVAHIPGA
Sbjct: 65  GTRSSFSTQSVSPNEPVVSVDWLHANIREPDLKVLDASWYMPDEQRNPLQEYQVAHIPGA 124

Query: 121 LFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV 180
           LFFDVDG++D+TTNLPHMLPSEEAFAAAVSALG+ENKDG+VVYDGKGIFSAARVWWMFRV
Sbjct: 125 LFFDVDGISDQTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRV 184

Query: 181 FGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF 240
           FGH+R+WVLDGGLP WRASG+DVESSASGDAILKASAASEAIEKVY+ Q VGP TFQT+F
Sbjct: 185 FGHERIWVLDGGLPTWRASGFDVESSASGDAILKASAASEAIEKVYRRQAVGPITFQTRF 244

Query: 241 QPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD 300
           QPHL+WTLEQV +NIE  T+Q +DARSKARFDG APEPRKGIRSGHVP SKCIPF QMLD
Sbjct: 245 QPHLVWTLEQVNQNIENKTHQHIDARSKARFDGIAPEPRKGIRSGHVPSSKCIPFSQMLD 304

Query: 301 ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           +SQ LLPADELKKRF+QEGISL+ PVVT+CGTGVTACILAL L
Sbjct: 305 SSQKLLPADELKKRFDQEGISLDSPVVTSCGTGVTACILALGL 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255544614|ref|XP_002513368.1| thiosulfate sulfertansferase, putative [Ricinus communis] gi|223547276|gb|EEF48771.1| thiosulfate sulfertansferase, putative [Ricinus communis]

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 276/346 (79%), Positives = 301/346 (86%), Gaps = 6/346 (1%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MA++ FTR     R +H S S+S K Q F SL NK+ FY R    HT+ +TS    P V+
Sbjct: 1   MAAAAFTRTLLGHRFIHCSQSLSLKIQTFPSLFNKRPFYIRADPVHTSHRTSG-WVPRVI 59

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S   G +A YST S+   EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNP QEYQVA
Sbjct: 60  ASTMVGTKASYSTQSLPANEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPIQEYQVA 119

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDG++DR+TNLPHMLPSEEAF+AAVSALG+ENKDGLVVYDGKGIFSAARVW
Sbjct: 120 HIPGALFFDVDGISDRSTNLPHMLPSEEAFSAAVSALGIENKDGLVVYDGKGIFSAARVW 179

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 235
           WMFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVY GQ VGP T
Sbjct: 180 WMFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYHGQAVGPIT 239

Query: 236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
           FQTKFQ HL+WTLEQVK+NIE+ T+Q +DARSKARFDG APEPRKGIRSGHVPGSKCIPF
Sbjct: 240 FQTKFQLHLVWTLEQVKKNIEDRTHQHIDARSKARFDGAAPEPRKGIRSGHVPGSKCIPF 299

Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILAL 341
           PQMLDASQTLLPADELKKRF+QEGISLE PV T+CGTGVTACILAL
Sbjct: 300 PQMLDASQTLLPADELKKRFDQEGISLESPVFTSCGTGVTACILAL 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118484746|gb|ABK94242.1| unknown [Populus trichocarpa]

 Score =  563 bits (1451), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 275/344 (79%), Positives = 302/344 (87%), Gaps = 7/344 (2%)

Query: 1   MASSLFTRRLVHSSFSISYK-PQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLA 59
           +  SL   RL+HSSFS+S+K PQ+FTSL   + F  R    HT+ K  S    CV+    
Sbjct: 6   LTKSLLGHRLIHSSFSLSHKTPQIFTSLFPGRTFQKRADPIHTSYK-PSQWVRCVV---- 60

Query: 60  AGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 119
            G RA++ST S+S  EPVVSVDWLHANLREPD+KVLDASWYMPDEQRNP QEYQVAHIPG
Sbjct: 61  -GTRANFSTQSLSLNEPVVSVDWLHANLREPDMKVLDASWYMPDEQRNPIQEYQVAHIPG 119

Query: 120 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR 179
           ALFFDVDG+AD+TTNLPHMLPSEEAFAAAVSALG+ENKDGLVVYDGKGIFSAARVWWMFR
Sbjct: 120 ALFFDVDGIADQTTNLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFR 179

Query: 180 VFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTK 239
           VFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ VGP T+QTK
Sbjct: 180 VFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVGPITYQTK 239

Query: 240 FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML 299
           FQPHL+WTLEQVK NIE+ T+Q VDARSKARFDG APEPRKGI+SGHVPGSKCIPF Q+L
Sbjct: 240 FQPHLVWTLEQVKSNIEDRTHQHVDARSKARFDGAAPEPRKGIKSGHVPGSKCIPFAQLL 299

Query: 300 DASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           D+SQTLLPADELKKRF+QEGISL+ PVVT+CGTGVTACILAL L
Sbjct: 300 DSSQTLLPADELKKRFDQEGISLKSPVVTSCGTGVTACILALGL 343

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492146|gb|AFK34139.1| unknown [Lotus japonicus]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 269/348 (77%), Positives = 302/348 (86%), Gaps = 5/348 (1%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MAS+L ++     RLVHSS  ++++P+V +SL  K+++  R    +TT  + +++    M
Sbjct: 3   MASTLLSKMLLGPRLVHSSSFLTHQPRVLSSLFTKRVYCVRAVPAYTTQNSKTTRWASCM 62

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S   GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QEYQVA
Sbjct: 63  ASSIVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDMKVLDASWYMPDEQRNPIQEYQVA 122

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDG+ADRTTNLPHMLPSEEAFAAAVSALG++NKD +VVYDGKG+FSAARVW
Sbjct: 123 HIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDVVVYDGKGLFSAARVW 182

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 235
           WMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVYQGQ VGP T
Sbjct: 183 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPIT 242

Query: 236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
           FQTKFQPHL+WTL+QVK+NIEE T+Q +DARSK RFDG APEPRKGIRSGHVPGSKCIPF
Sbjct: 243 FQTKFQPHLVWTLDQVKKNIEEKTHQQLDARSKPRFDGAAPEPRKGIRSGHVPGSKCIPF 302

Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
            Q+LD SQTLLPA ELKKRFEQEGISLE PVVT+CGTGVTACILAL L
Sbjct: 303 SQLLDGSQTLLPAAELKKRFEQEGISLESPVVTSCGTGVTACILALGL 350

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096608|ref|XP_002310670.1| predicted protein [Populus trichocarpa] gi|222853573|gb|EEE91120.1| predicted protein [Populus trichocarpa]

 Score =  560 bits (1443), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 274/344 (79%), Positives = 301/344 (87%), Gaps = 7/344 (2%)

Query: 1   MASSLFTRRLVHSSFSISYK-PQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVMSSLA 59
           +  SL   RL+HSSFS+S+K PQ+FTSL   + F  R    HT+ K  S    CV+    
Sbjct: 6   LTKSLLGHRLIHSSFSLSHKTPQIFTSLFPGRTFQKRADPIHTSYK-PSQWVRCVV---- 60

Query: 60  AGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 119
            G RA++ST S+S  EPVV VDWLHANLREPD+KVLDASWYMPDEQRNP QEYQVAHIPG
Sbjct: 61  -GTRANFSTQSLSLNEPVVFVDWLHANLREPDMKVLDASWYMPDEQRNPIQEYQVAHIPG 119

Query: 120 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR 179
           ALFFDVDG+AD+TTNLPHMLPSEEAFAAAVSALG+ENKDGLVVYDGKGIFSAARVWWMFR
Sbjct: 120 ALFFDVDGIADQTTNLPHMLPSEEAFAAAVSALGIENKDGLVVYDGKGIFSAARVWWMFR 179

Query: 180 VFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTK 239
           VFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQ VGP T+QTK
Sbjct: 180 VFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVGPITYQTK 239

Query: 240 FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML 299
           FQPHL+WTLEQVK NIE+ T+Q VDARSKARFDG APEPRKGI+SGHVPGSKCIPF Q+L
Sbjct: 240 FQPHLVWTLEQVKSNIEDRTHQHVDARSKARFDGAAPEPRKGIKSGHVPGSKCIPFAQLL 299

Query: 300 DASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           D+SQTLLPADELKKRF+QEGISL+ PVVT+CGTGVTACILAL L
Sbjct: 300 DSSQTLLPADELKKRFDQEGISLKSPVVTSCGTGVTACILALGL 343

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4406372|gb|AAD19957.1| thiosulfate sulfurtransferase [Datisca glomerata]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 270/348 (77%), Positives = 298/348 (85%), Gaps = 6/348 (1%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MAS+LF++     RL+  SF ++  PQ FTSL NK+ F+ R    +T  KTS   S  VM
Sbjct: 1   MASTLFSKALSGSRLIRPSFYLTNYPQSFTSLFNKRQFHLRSNPAYTAYKTSDRIS-SVM 59

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S  AG R ++ST S+   EPVVS DWLH+NL+EPDL+VLDASWYMPDEQRNP QEYQVA
Sbjct: 60  ASSVAGTRLEFSTQSLPTNEPVVSADWLHSNLKEPDLRVLDASWYMPDEQRNPLQEYQVA 119

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDG++DRTT LPHMLPSEEAFAAAVSALG++NKDGLVVYDGKGIFSAARVW
Sbjct: 120 HIPGALFFDVDGISDRTTKLPHMLPSEEAFAAAVSALGIQNKDGLVVYDGKGIFSAARVW 179

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 235
           WMFRVFGHDRVWVLDGGLPRWRA+GYDVESSAS DAILKASAASE IEK+YQGQ  GP T
Sbjct: 180 WMFRVFGHDRVWVLDGGLPRWRAAGYDVESSASSDAILKASAASEVIEKIYQGQAAGPIT 239

Query: 236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
           FQTKFQP+LIW LEQVK+NIEE TYQ VDARSK RFDG  PEPRKGIRSGHVPGSKCIPF
Sbjct: 240 FQTKFQPNLIWGLEQVKKNIEEKTYQHVDARSKPRFDGAVPEPRKGIRSGHVPGSKCIPF 299

Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           PQ+LDASQ LLPADELKKRF+QEGISLE P+VT+CGTGVTACILAL L
Sbjct: 300 PQILDASQALLPADELKKRFDQEGISLESPIVTSCGTGVTACILALGL 347

Source: Datisca glomerata

Species: Datisca glomerata

Genus: Datisca

Family: Datiscaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356525750|ref|XP_003531486.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase-like [Glycine max]

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/352 (75%), Positives = 302/352 (85%), Gaps = 11/352 (3%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRP----KHTHTTLKTSSSQS 51
           MAS+LFT+     RL+H    ++++PQ+ +SL +K+LF  R      +T   +KT+   +
Sbjct: 1   MASTLFTKMLLGQRLIHPYSFLTHQPQILSSLFSKRLFCIRAVPVSAYTSQNIKTTG-WA 59

Query: 52  PCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQE 111
           PC M+S + GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QE
Sbjct: 60  PC-MASSSVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDIKVLDASWYMPDEQRNPIQE 118

Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSA 171
           YQVAHIPGALFFDVDG+ADRTT LPHMLPSEEAFAAAVSALG+ENKD LVVYDGKG+FSA
Sbjct: 119 YQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGIENKDDLVVYDGKGLFSA 178

Query: 172 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV 231
           ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVY+GQ V
Sbjct: 179 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYKGQTV 238

Query: 232 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSK 291
           GP TFQTKFQPHL+W ++QVK+NIE+ T+Q +DARSK RFDG   EPRKGIRSGHVPGSK
Sbjct: 239 GPLTFQTKFQPHLVWNIDQVKKNIEDKTHQHIDARSKPRFDGAVQEPRKGIRSGHVPGSK 298

Query: 292 CIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           CIPF Q+LD+SQTLLPADELKKRFEQEGIS+E P VT+CGTGVTACILAL L
Sbjct: 299 CIPFAQLLDSSQTLLPADELKKRFEQEGISVESPAVTSCGTGVTACILALGL 350

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347396|ref|XP_003637743.1| Mercaptopyruvate sulfurtransferase-like protein [Medicago truncatula] gi|355503678|gb|AES84881.1| Mercaptopyruvate sulfurtransferase-like protein [Medicago truncatula]

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 268/349 (76%), Positives = 295/349 (84%), Gaps = 7/349 (2%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQ-SPCV 54
           MASSLFT+     R +H+S   S+ P + +S  NK+LF  R   T T + T S+  SPC+
Sbjct: 1   MASSLFTKILLRPRSIHTSSFFSHNPPILSSFFNKRLFSIRAVPTSTAVNTKSTGWSPCM 60

Query: 55  MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 114
            SS+ + R A YST S    EPVVSVDWL+ NL+EP +KV+DASWYMPDEQRNP QEYQV
Sbjct: 61  ASSIVS-RTATYSTRSAPSNEPVVSVDWLYDNLKEPAIKVVDASWYMPDEQRNPIQEYQV 119

Query: 115 AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 174
           AHIPGALFFDVDG+ADRTTNLPHMLPSEEAFAAAVSALG++NKD LVVYDGKGIFSAARV
Sbjct: 120 AHIPGALFFDVDGIADRTTNLPHMLPSEEAFAAAVSALGIQNKDDLVVYDGKGIFSAARV 179

Query: 175 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 234
           WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAASEAIEKVYQGQ VGP 
Sbjct: 180 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYQGQAVGPI 239

Query: 235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 294
           TF+TKFQP L+W LEQV +NIEE ++Q VDAR K RFDG APEPRKGIRSGHVPGSKCIP
Sbjct: 240 TFETKFQPQLVWNLEQVTKNIEEKSHQHVDARGKPRFDGIAPEPRKGIRSGHVPGSKCIP 299

Query: 295 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           F QMLD SQTLLPAD+LKKRF+QEGISLE PVVT+CGTGVTACILAL L
Sbjct: 300 FSQMLDGSQTLLPADDLKKRFDQEGISLESPVVTSCGTGVTACILALGL 348

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449497667|ref|XP_004160468.1| PREDICTED: thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial-like [Cucumis sativus]

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 256/348 (73%), Positives = 293/348 (84%), Gaps = 6/348 (1%)

Query: 1   MASSLFTRRLVHSSF--SISY---KPQVFTSLLNKKLFYSRPKHTHTTLKTSSSQSPCVM 55
           MAS+L +R L+ + F  SIS+   K Q+  S+ +KKLF  RP         +   S   M
Sbjct: 1   MASTLLSRTLLVNRFAHSISFPSGKTQILPSVFSKKLFQFRPNSASVAYNPTRRFS-SFM 59

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA 115
           +S  AG +A +S+ S+S  +P+VS DWLH+NL+EPDLKVLDASWYMPDEQRNP QEYQVA
Sbjct: 60  ASSVAGAKAHFSSKSLSTDDPIVSPDWLHSNLKEPDLKVLDASWYMPDEQRNPIQEYQVA 119

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGALFFDVDGV+DRT+ LPHMLPSEEAFAA VSALG+ NKDG+VVYDGKG+FSAARVW
Sbjct: 120 HIPGALFFDVDGVSDRTSKLPHMLPSEEAFAAVVSALGISNKDGVVVYDGKGLFSAARVW 179

Query: 176 WMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTT 235
           WMFRVFGHDR+WVLDGGLP+WR  GYDVESSASGDAILKA+AASEAIEK+YQGQ VGP T
Sbjct: 180 WMFRVFGHDRIWVLDGGLPKWRTLGYDVESSASGDAILKATAASEAIEKIYQGQAVGPIT 239

Query: 236 FQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPF 295
           FQTKFQPHL+W LE+V+ NI E T+QL+DARSKARFDG   EPRKGIRSGHVPGSKCIPF
Sbjct: 240 FQTKFQPHLVWDLEKVQENITERTHQLIDARSKARFDGAVLEPRKGIRSGHVPGSKCIPF 299

Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           PQMLD+SQ+LLPAD+LKKRFEQEGISLE P+VT+CGTGVTACILAL L
Sbjct: 300 PQMLDSSQSLLPADQLKKRFEQEGISLENPIVTSCGTGVTACILALGL 347

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557008|ref|XP_003546810.1| PREDICTED: 3-mercaptopyruvate sulfurtransferase-like [Glycine max]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 266/352 (75%), Positives = 300/352 (85%), Gaps = 11/352 (3%)

Query: 1   MASSLFTR-----RLVHSSFSISYKPQVFTSLLNKKLFYSRP----KHTHTTLKTSSSQS 51
           MAS+L T+     RL+H S  ++++PQ+ +SL +K+LF  R       T   +KT+   +
Sbjct: 6   MASTLLTKMLLGHRLIHPSSFLTHQPQILSSLFSKRLFCIRAVPVSASTSQNIKTTG-WA 64

Query: 52  PCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQE 111
           PC M+S + GRRA YST SVS  EPVVSVDWL+ NL+EPD+KVLDASWYMPDEQRNP QE
Sbjct: 65  PC-MASSSVGRRATYSTQSVSTNEPVVSVDWLYDNLKEPDIKVLDASWYMPDEQRNPIQE 123

Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSA 171
           YQVAHIPGALFFDVDG+ADRTT LPHMLPS EAFAAAVSALG+ENKD LVVYDGKG+FSA
Sbjct: 124 YQVAHIPGALFFDVDGIADRTTKLPHMLPSAEAFAAAVSALGIENKDDLVVYDGKGLFSA 183

Query: 172 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV 231
           ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS DAILKASAA+EAIEKVY+GQ V
Sbjct: 184 ARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAATEAIEKVYKGQTV 243

Query: 232 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSK 291
           GP TFQTKFQPHL+W ++QVK+NIE+ T+Q +DARSK RFDG   EPRKGIRSGHVPGSK
Sbjct: 244 GPLTFQTKFQPHLVWNIDQVKKNIEDKTHQHIDARSKPRFDGTVQEPRKGIRSGHVPGSK 303

Query: 292 CIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           CIPF Q+LD+SQTLLPADELKKRFEQEGISLE P VT+CGTGVTACILAL L
Sbjct: 304 CIPFAQLLDSSQTLLPADELKKRFEQEGISLESPAVTSCGTGVTACILALGL 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	349
TAIR|locus:2207345	379	MST1 "mercaptopyruvate sulfurt	0.979	0.902	0.706	7.1e-132
TAIR|locus:2032800	342	RDH2 "rhodanese homologue 2" [	0.828	0.845	0.742	3.7e-119
UNIPROTKB|Q608D7	316	sseA "Sulfurtransferase" [Meth	0.372	0.411	0.515	3.8e-58
ZFIN|ZDB-GENE-030131-9020	302	zgc:162544 "zgc:162544" [Danio	0.469	0.543	0.421	4.2e-55
UNIPROTKB|E1C8D8	293	MPST "Sulfurtransferase" [Gall	0.369	0.440	0.496	3.7e-54
UNIPROTKB|H9L016	267	H9L016 "Sulfurtransferase" [Ga	0.320	0.419	0.535	1.1e-52
UNIPROTKB|J3KPV7	317	MPST "Sulfurtransferase" [Homo	0.432	0.476	0.424	1.6e-51
UNIPROTKB|P25325	297	MPST "3-mercaptopyruvate sulfu	0.432	0.508	0.424	1.6e-51
RGD|620065	297	Mpst "mercaptopyruvate sulfurt	0.378	0.444	0.442	8.7e-51
UNIPROTKB|E2RJF7	298	MPST "Sulfurtransferase" [Cani	0.432	0.506	0.433	1.1e-50

TAIR|locus:2207345 MST1 "mercaptopyruvate sulfurtransferase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1293 (460.2 bits), Expect = 7.1e-132, P = 7.1e-132
 Identities = 245/347 (70%), Positives = 280/347 (80%)

Query:     1 MASSLFTRRLVHSSFSISYKPQVFTSLLNKKLFYSRPXXXXXXXXXXXXXXPC----VMS 56
             MAS+LF+R  + +S  +   P +   + N   F SR                      M+
Sbjct:     1 MASTLFSRTFLAASHRL-ITPSLPQKIFNPATFLSRSLHSQLGSASTAYKSTTWARRAMA 59

Query:    57 SLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAH 116
             S     +A YST SVS  EPVVSVDWLHANLREPDLK+LDASWYMPDEQRNP QEYQVAH
Sbjct:    60 STGVETKAGYSTSSVSTSEPVVSVDWLHANLREPDLKILDASWYMPDEQRNPIQEYQVAH 119

Query:   117 IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWW 176
             IP ALFFD+DG++DR T+LPHMLP+EEAFAA  SALG++NKD +VVYDGKGIFSAARVWW
Sbjct:   120 IPRALFFDLDGISDRKTSLPHMLPTEEAFAAGCSALGIDNKDEVVVYDGKGIFSAARVWW 179

Query:   177 MFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTF 236
             MFRVFGH++VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEK+YQGQ V P TF
Sbjct:   180 MFRVFGHEKVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKIYQGQTVSPITF 239

Query:   237 QTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFP 296
             QTKFQPHL+WTL+QVK N+E+ TYQ +DARSKARFDG APEPRKGIRSGH+PGSKCIPFP
Sbjct:   240 QTKFQPHLVWTLDQVKNNMEDPTYQHIDARSKARFDGTAPEPRKGIRSGHIPGSKCIPFP 299

Query:   297 QMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
             QM D+  TLLPA+ELKKRF+QE ISL+KP++ +CGTGVTACILA+ L
Sbjct:   300 QMFDSCNTLLPAEELKKRFDQEDISLDKPIMASCGTGVTACILAMGL 346

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0007568 "aging" evidence=ISS

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IDA

GO:0016783 "sulfurtransferase activity" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0000394 "RNA splicing, via endonucleolytic cleavage and ligation" evidence=RCA

GO:0009086 "methionine biosynthetic process" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

TAIR|locus:2032800 RDH2 "rhodanese homologue 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1173 (418.0 bits), Expect = 3.7e-119, P = 3.7e-119
 Identities = 216/291 (74%), Positives = 252/291 (86%)

Query:    54 VMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ 113
             VM+S  +  +A+Y+ +S +  EPVVSVDWLH+NL + D+KVLDASWYM  EQRNP QEYQ
Sbjct:    24 VMASSGSEAKANYAPISTN--EPVVSVDWLHSNLGDADIKVLDASWYMAHEQRNPIQEYQ 81

Query:   114 VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAAR 173
             VAHIPGALFFD++G+ADR TNL HMLPSEEAFAA  SALG+EN DG+VVYDG G+FSAAR
Sbjct:    82 VAHIPGALFFDLNGIADRKTNLRHMLPSEEAFAAGCSALGIENNDGVVVYDGMGLFSAAR 141

Query:   174 VWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP 233
             VWWMFRVFGHD+VWVLDGGLP+WRASGYDVESS S DAILKASAA+EAIEK+YQGQ + P
Sbjct:   142 VWWMFRVFGHDKVWVLDGGLPKWRASGYDVESSVSNDAILKASAATEAIEKIYQGQTISP 201

Query:   234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCI 293
              TFQTKF+PHL+  L+QVK NIE+ TYQ +DARSKARFDG APEP KG+ SGH+PGSKC+
Sbjct:   202 ITFQTKFRPHLVLALDQVKENIEDKTYQHIDARSKARFDGIAPEPWKGLPSGHIPGSKCV 261

Query:   294 PFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
             PFP M D+SQTLLPA+ELKK+FEQE ISL+ P+  +CGTGVTACILAL L+
Sbjct:   262 PFPLMFDSSQTLLPAEELKKQFEQEDISLDSPIAASCGTGVTACILALGLY 312

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA;ISS;IDA

GO:0005739 "mitochondrion" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0005829 "cytosol" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IGI

UNIPROTKB|Q608D7 sseA "Sulfurtransferase" [Methylococcus capsulatus str. Bath (taxid:243233)]

 Score = 363 (132.8 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
 Identities = 67/130 (51%), Positives = 87/130 (66%)

Query:    76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             P+V V WL  +L +P + V+DAS++MP ++R+   E+  AHIPGA FFD+D +AD T  L
Sbjct:    40 PLVDVRWLAGHLHDPQVVVVDASFFMPAQRRDAKTEFGAAHIPGARFFDIDAIADTTCPL 99

Query:   136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
             PHMLP+   FA  V  LG+ N   ++ YDG    ++ARVWW FRVFGHDRV VLDGGL  
Sbjct:   100 PHMLPAPAFFAEQVGRLGIGNDTHVIAYDGNDFMASARVWWTFRVFGHDRVSVLDGGLRC 159

Query:   196 WRASGYDVES 205
             WR  G  + S
Sbjct:   160 WRDQGLPLSS 169

GO:0006790 "sulfur compound metabolic process" evidence=ISS

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=ISS

ZFIN|ZDB-GENE-030131-9020 zgc:162544 "zgc:162544" [Danio rerio (taxid:7955)]

 Score = 343 (125.8 bits), Expect = 4.2e-55, Sum P(2) = 4.2e-55
 Identities = 72/171 (42%), Positives = 100/171 (58%)

Query:    64 ADYSTLSVSPKEPVVSVDWL----HANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG 119
             A + ++  +    +V+  WL     +N   P+L++LDASWY+P  +RNP  E++  HIPG
Sbjct:     1 AYWMSVMAAQTRALVAARWLADAVKSNRVGPNLRILDASWYLPKMKRNPRAEFEQTHIPG 60

Query:   120 ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWM 177
             A FFD+D   D+++   HMLP++  FA  V  LG+ N   +VVYD    G FSA RVWWM
Sbjct:    61 ASFFDIDECCDKSSEFDHMLPTKGEFADYVGNLGIGNNTHVVVYDASDFGSFSAPRVWWM 120

Query:   178 FRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAA-SEAIEKVYQ 227
             FRVFGH  V VLDGG   W   G+ V    S  A +  +A+  E+  K Y+
Sbjct:   121 FRVFGHSSVSVLDGGFKNWLKEGHPVSQQYSKPAPVDFNASFKESWVKTYE 171

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|E1C8D8 MPST "Sulfurtransferase" [Gallus gallus (taxid:9031)]

 Score = 351 (128.6 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
 Identities = 67/135 (49%), Positives = 89/135 (65%)

Query:    77 VVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  WL   ++       LKV+DASWY+P  +R+P QE++  HIPGA+FFD+D  +DRT
Sbjct:    10 LVSAKWLSEAIKSKQTGQALKVVDASWYLPKMKRDPKQEFEERHIPGAVFFDIDQCSDRT 69

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HM+P    FA  V  LG+ N   +VVYDG  +G+FSA RVWWMFRVFGH+ V +LD
Sbjct:    70 SPYDHMMPKANEFAEYVGKLGVGNDSHVVVYDGSDQGLFSAPRVWWMFRVFGHEAVSLLD 129

Query:   191 GGLPRWRASGYDVES 205
             GGL  W   G+ + S
Sbjct:   130 GGLKNWLREGFPLSS 144

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

UNIPROTKB|H9L016 H9L016 "Sulfurtransferase" [Gallus gallus (taxid:9031)]

 Score = 337 (123.7 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
 Identities = 61/114 (53%), Positives = 81/114 (71%)

Query:    94 VLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG 153
             V+DASWY+P  +R+P QE++  HIPGA+FFD+D  +DRT+   HM+P  + FA  V  LG
Sbjct:     1 VVDASWYLPKMKRDPKQEFEERHIPGAVFFDIDQCSDRTSPYDHMMPKADEFAEYVGKLG 60

Query:   154 LENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES 205
             + N   +VVYDG  +G+FSA RVWWMFRVFGH+ V +LDGGL  W   G+ + S
Sbjct:    61 VGNDSHVVVYDGSDQGLFSAPRVWWMFRVFGHEAVSLLDGGLKNWLREGFPLSS 114

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

UNIPROTKB|J3KPV7 MPST "Sulfurtransferase" [Homo sapiens (taxid:9606)]

 Score = 309 (113.8 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
 Identities = 67/158 (42%), Positives = 90/158 (56%)

Query:    77 VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct:    30 LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 89

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +LD
Sbjct:    90 SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLD 149

Query:   191 GGLPRWRASGYDVESSASGDAILKASAASE-AIEKVYQ 227
             GGL  W      + S  S  A  +  A  + A  K Y+
Sbjct:   150 GGLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYE 187

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

UNIPROTKB|P25325 MPST "3-mercaptopyruvate sulfurtransferase" [Homo sapiens (taxid:9606)]

 Score = 309 (113.8 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
 Identities = 67/158 (42%), Positives = 90/158 (56%)

Query:    77 VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct:    10 LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +LD
Sbjct:    70 SPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLD 129

Query:   191 GGLPRWRASGYDVESSASGDAILKASAASE-AIEKVYQ 227
             GGL  W      + S  S  A  +  A  + A  K Y+
Sbjct:   130 GGLRHWLRQNLPLSSGKSQPAPAEFRAQLDPAFIKTYE 167

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IEA

GO:0070814 "hydrogen sulfide biosynthetic process" evidence=ISS

GO:0043005 "neuron projection" evidence=ISS

GO:0009636 "response to toxic substance" evidence=TAS

GO:0009440 "cyanate catabolic process" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

RGD|620065 Mpst "mercaptopyruvate sulfurtransferase" [Rattus norvegicus (taxid:10116)]

 Score = 307 (113.1 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
 Identities = 61/138 (44%), Positives = 83/138 (60%)

Query:    77 VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  W+   L+ P     LK+LDASWY+P   R+  +E++  HIPGA FFD+D  +D T
Sbjct:    10 LVSAQWVAEALKSPRASQPLKLLDASWYLPKLGRDARREFEERHIPGAAFFDIDRCSDHT 69

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HMLPS   FA    +LG+     +V+YDG  +G++SA RVWWMFR FGH  V +LD
Sbjct:    70 SPYDHMLPSATHFADYAGSLGVSAATHVVIYDGSDQGLYSAPRVWWMFRAFGHHSVSLLD 129

Query:   191 GGLPRWRASGYDVESSAS 208
             GG   W +    + S  S
Sbjct:   130 GGFRYWLSQNLPISSGKS 147

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO

GO:0016784 "3-mercaptopyruvate sulfurtransferase activity" evidence=IEA

UNIPROTKB|E2RJF7 MPST "Sulfurtransferase" [Canis lupus familiaris (taxid:9615)]

 Score = 313 (115.2 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
 Identities = 69/159 (43%), Positives = 91/159 (57%)

Query:    77 VVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DRT
Sbjct:    10 LVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRT 69

Query:   133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLD 190
             +   HMLPS E FA     LG+     +VVYD   +G+++A RVWWMFR FGH  V +LD
Sbjct:    70 SPYDHMLPSAEHFAEYAGRLGVGAATHVVVYDASDQGLYAAPRVWWMFRAFGHRTVSLLD 129

Query:   191 GGLPRWRASGYDVESSASGDAILK--ASAASEAIEKVYQ 227
             GGL  W   G  + S  S  A      +A   A  K Y+
Sbjct:   130 GGLRHWLRLGLPLSSGKSRPAPAADFRAALDPAFVKTYE 168

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0004792 "thiosulfate sulfurtransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O64530	STR1_ARATH	2, ., 8, ., 1, ., 2	0.7146	0.9799	0.9023	yes	no
Q24JL3	STR2_ARATH	2, ., 8, ., 1, ., 2	0.7422	0.8280	0.8450	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.8.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_VII0743	SubName- Full=Putative uncharacterized protein; (372 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.XIV.3012.1	aspartate transaminase (EC-2.6.1.1) (403 aa)						•			0.899
	gw1.VI.2755.1	aspartate transaminase (EC-2.6.1.1) (397 aa)						•			0.899
	grail3.0013044701	aspartate transaminase (EC-2.6.1.1) (466 aa)						•			0.899
	eugene3.00030830	lactate dehydrogenase (EC-1.1.1.27) (351 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XVIII0241	SubName- Full=Putative uncharacterized protein; (407 aa)						•			0.899
	estExt_fgenesh4_pm.C_LG_XVIII0158	aspartate transaminase (EC-2.6.1.1) (466 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_VI1672	aspartate transaminase (EC-2.6.1.1) (449 aa)						•			0.899
	estExt_fgenesh4_pg.C_LG_VI1671	aspartate transaminase (EC-2.6.1.1) (442 aa)						•			0.899
	fgenesh4_pm.C_LG_I001118	hypothetical protein (460 aa)	•				•	•	•		0.875
	estExt_Genewise1_v1.C_LG_VII0255	cysteine desulfurase/transaminase (EC-2.8.1.7) (452 aa)					•	•	•		0.845

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	349
PLN02723	320	PLN02723, PLN02723, 3-mercaptopyruvate sulfurtrans	0.0
COG2897	285	COG2897, SseA, Rhodanese-related sulfurtransferase	7e-89
PRK11493	281	PRK11493, sseA, 3-mercaptopyruvate sulfurtransfera	1e-72
cd01448	122	cd01448, TST_Repeat_1, Thiosulfate sulfurtransfera	1e-55
cd01449	118	cd01449, TST_Repeat_2, Thiosulfate sulfurtransfera	3e-40
cd01445	138	cd01445, TST_Repeats, Thiosulfate sulfurtransferas	3e-22
smart00450	100	smart00450, RHOD, Rhodanese Homology Domain	1e-18
pfam00581	106	pfam00581, Rhodanese, Rhodanese-like domain	1e-18
smart00450	100	smart00450, RHOD, Rhodanese Homology Domain	1e-10
pfam00581	106	pfam00581, Rhodanese, Rhodanese-like domain	3e-10
PRK09629	610	PRK09629, PRK09629, bifunctional thiosulfate sulfu	5e-10
cd01445	138	cd01445, TST_Repeats, Thiosulfate sulfurtransferas	8e-08
cd00158	89	cd00158, RHOD, Rhodanese Homology Domain (RHOD); a	1e-07
cd01449	118	cd01449, TST_Repeat_2, Thiosulfate sulfurtransfera	4e-07
cd00158	89	cd00158, RHOD, Rhodanese Homology Domain (RHOD); a	6e-07
cd01524	90	cd01524, RHOD_Pyr_redox, Member of the Rhodanese H	7e-04
COG2897	285	COG2897, SseA, Rhodanese-related sulfurtransferase	0.002
cd01519	106	cd01519, RHOD_HSP67B2, Member of the Rhodanese Hom	0.002
cd01444	96	cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and	0.003

>gnl|CDD|178324 PLN02723, PLN02723, 3-mercaptopyruvate sulfurtransferase

 Score =  588 bits (1517), Expect = 0.0
 Identities = 246/290 (84%), Positives = 272/290 (93%)

Query: 55  MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 114
           M+S  +  +A+YST S+S  EPVVSVDWLHANLREPD+KVLDASWYMPDEQRNP QEYQV
Sbjct: 1   MASSGSETKANYSTQSISTNEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQV 60

Query: 115 AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARV 174
           AHIPGALFFD+DG++DRTT+LPHMLPSEEAFAAAVSALG+ENKDG+VVYDGKGIFSAARV
Sbjct: 61  AHIPGALFFDLDGISDRTTDLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARV 120

Query: 175 WWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT 234
           WWMFRVFGH++VWVLDGGLP+WRASGYDVESSASGDAILKASAASEAIEKVYQGQ V P 
Sbjct: 121 WWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAILKASAASEAIEKVYQGQTVSPI 180

Query: 235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIP 294
           TFQTKFQPHL+WTLEQVK+NIE+ TYQ +DARSKARFDG APEPRKGIRSGH+PGSKC+P
Sbjct: 181 TFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVP 240

Query: 295 FPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           FPQMLD+SQTLLPA+ELKKRFEQEGISL+ P+V +CGTGVTACILAL L 
Sbjct: 241 FPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLH 290

Length = 320

>gnl|CDD|225450 COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score =  268 bits (686), Expect = 7e-89
 Identities = 101/271 (37%), Positives = 138/271 (50%), Gaps = 24/271 (8%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
             E +VS DWL  NL +P + ++DA   +PD      +EY   HIPGA+FFD +      
Sbjct: 8   SSEFLVSPDWLAENLDDPAVVIVDARIILPDPDDA--EEYLEGHIPGAVFFDWEADLSDP 65

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
             LPHMLPS E FA  +  LG+ N D +VVYD  G F AAR WW+ R  GH+ V +LDGG
Sbjct: 66  VPLPHMLPSPEQFAKLLGELGIRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGG 125

Query: 193 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVK 252
           LP W+A+G  +E+                           PTTF  K+    +     V 
Sbjct: 126 LPAWKAAGLPLETEPP---------------------EPPPTTFSAKYNVKAVVDATLVA 164

Query: 253 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK 312
             +E     L+DARS  RF G  PEPR G  +GH+PG+  IP+  ++D        +E+ 
Sbjct: 165 DALEVPAVLLIDARSPERFRGKEPEPRDGK-AGHIPGAINIPWTDLVDDGGLFKSPEEIA 223

Query: 313 KRFEQEGISLEKPVVTACGTGVTACILALVL 343
           + +   GI  +K V+  CG+GV A +  L L
Sbjct: 224 RLYADAGIDPDKEVIVYCGSGVRASVTWLAL 254

Length = 285

>gnl|CDD|236917 PRK11493, sseA, 3-mercaptopyruvate sulfurtransferase; Provisional

 Score =  226 bits (578), Expect = 1e-72
 Identities = 99/268 (36%), Positives = 144/268 (53%), Gaps = 23/268 (8%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V+ DWL  ++ +P+++++DA    P  E R+   EY+  HIPGA+FFD++ ++D T+ LP
Sbjct: 7   VAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEALSDHTSPLP 66

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HM+P  E FA A+  LG+     LVVYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 67  HMMPRPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGW 126

Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
           +     +E    G   L                      F   F P  +  L  V     
Sbjct: 127 QRDDLLLE---EGAVELP------------------EGEFNAAFNPEAVVRLTDVLLASH 165

Query: 257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 316
           E T Q+VDAR  ARF+ +  EPR G+R GH+PG+  +P+ + L     L   DEL   F 
Sbjct: 166 EKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTE-LVREGELKTTDELDAIFF 224

Query: 317 QEGISLEKPVVTACGTGVTACILALVLF 344
             G+S ++P++ +CG+GVTA ++ L L 
Sbjct: 225 GRGVSFDRPIIASCGSGVTAAVVVLALA 252

Length = 281

>gnl|CDD|238725 cd01448, TST_Repeat_1, Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

 Score =  177 bits (451), Expect = 1e-55
 Identities = 66/124 (53%), Positives = 84/124 (67%), Gaps = 2/124 (1%)

Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DWL  +L +PD+++LDA WY+PD  R+  +EY   HIPGA+FFD+D   D  +  P
Sbjct: 1   LVSPDWLAEHLDDPDVRILDARWYLPD--RDGRKEYLEGHIPGAVFFDLDEDLDDKSPGP 58

Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLPS E FA  + +LG+ N D +VVYD  G F AAR WW  R FGH+ V VLDGGL  W
Sbjct: 59  HMLPSPEEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAW 118

Query: 197 RASG 200
           +A G
Sbjct: 119 KAEG 122

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction. Length = 122

>gnl|CDD|238726 cd01449, TST_Repeat_2, Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

 Score =  137 bits (347), Expect = 3e-40
 Identities = 49/97 (50%), Positives = 65/97 (67%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           T E+V  N++ G  QLVDARS  RF G+ PEPR G+RSGH+PG+  IP+  +LD   T  
Sbjct: 2   TAEEVLANLDSGDVQLVDARSPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDEDGTFK 61

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
             +EL+  F   GI+ +KPV+  CG+GVTAC+L L L
Sbjct: 62  SPEELRALFAALGITPDKPVIVYCGSGVTACVLLLAL 98

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue. Length = 118

>gnl|CDD|238722 cd01445, TST_Repeats, Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

 Score = 91.0 bits (225), Expect = 3e-22
 Identities = 45/136 (33%), Positives = 57/136 (41%), Gaps = 17/136 (12%)

Query: 78  VSVDWLHANLRE----PDLKVLDASWYMPD--EQRNPFQEYQVA---------HIPGALF 122
            S + L  NL         ++LDA    P   E R  + E Q           HIPGA F
Sbjct: 1   KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASF 60

Query: 123 FDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRV 180
           FD +   D       M PSE  FAA   A G++    L+  DG   G F+A  +    R+
Sbjct: 61  FDFEECLDEAGFEESMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARL 120

Query: 181 FGHDRVWVLDGGLPRW 196
            GH  V +LDGG   W
Sbjct: 121 CGHPDVAILDGGFFEW 136

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats. Length = 138

>gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain

 Score = 79.8 bits (197), Expect = 1e-18
 Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 15/114 (13%)

Query: 89  EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA 148
           +  + +LD         R+P +EY+  HIPGA+   +  + DR   L  +      F   
Sbjct: 2   DEKVVLLDV--------RSP-EEYEGGHIPGAVNIPLSELLDRRGELDIL-----EFEEL 47

Query: 149 VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 202
           +  LGL+    +VVY   G  SA +  W+ R  G   V++LDGG   W A+G  
Sbjct: 48  LKRLGLDKDKPVVVYCRSGNRSA-KAAWLLRELGFKNVYLLDGGYKEWSAAGPP 100

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. Length = 100

>gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain

 Score = 79.9 bits (197), Expect = 1e-18
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 27/126 (21%)

Query: 79  SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHM 138
           + + L A L   D+ ++D             +EY   HIPGA+            N+P  
Sbjct: 1   TAEELKALLEADDVVLIDVR---------SPEEYAKGHIPGAV------------NIPLS 39

Query: 139 LPSEEAFAAAVSALG--LENKDGLVVYDGKGIFS----AARVWWMFRVFGHDRVWVLDGG 192
           LPS +   + +  LG  L+    +VVY   G  S    A  +  + +  G+  V+VLDGG
Sbjct: 40  LPSLDKLESELEELGKKLDKDKTIVVYCASGNRSGQAAALLLALILKALGYKNVYVLDGG 99

Query: 193 LPRWRA 198
              W+A
Sbjct: 100 FEAWKA 105

Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Length = 106

>gnl|CDD|197731 smart00450, RHOD, Rhodanese Homology Domain

 Score = 57.5 bits (139), Expect = 1e-10
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 12/88 (13%)

Query: 256 EEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRF 315
            +    L+D RS   ++G           GH+PG+  IP  ++LD     L   E ++  
Sbjct: 1   NDEKVVLLDVRSPEEYEG-----------GHIPGAVNIPLSELLDRR-GELDILEFEELL 48

Query: 316 EQEGISLEKPVVTACGTGVTACILALVL 343
           ++ G+  +KPVV  C +G  +   A +L
Sbjct: 49  KRLGLDKDKPVVVYCRSGNRSAKAAWLL 76

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions. Length = 100

>gnl|CDD|216005 pfam00581, Rhodanese, Rhodanese-like domain

 Score = 56.7 bits (137), Expect = 3e-10
 Identities = 25/99 (25%), Positives = 40/99 (40%), Gaps = 21/99 (21%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           T E++K  +E     L+D RS   +             GH+PG+  IP            
Sbjct: 1   TAEELKALLEADDVVLIDVRSPEEYAK-----------GHIPGAVNIPLSLP-------- 41

Query: 307 PADELKKRFEQEGISL--EKPVVTACGTGVTACILALVL 343
             D+L+   E+ G  L  +K +V  C +G  +   A +L
Sbjct: 42  SLDKLESELEELGKKLDKDKTIVVYCASGNRSGQAAALL 80

Rhodanese has an internal duplication. This Pfam represents a single copy of this duplicated domain. The domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases. Length = 106

>gnl|CDD|104071 PRK09629, PRK09629, bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

 Score = 60.5 bits (146), Expect = 5e-10
 Identities = 57/222 (25%), Positives = 85/222 (38%), Gaps = 26/222 (11%)

Query: 112 YQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGL-VVYDGKGIFS 170
           Y+  HI GA F D           P +LP           LG  N D + VVYD +G   
Sbjct: 36  YEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELG-HNPDAVYVVYDDEGGGW 94

Query: 171 AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV 230
           A R  W+  V GH     LDGG+  W A    + +     A                   
Sbjct: 95  AGRFIWLLDVIGHSGYHYLDGGVLAWEAQALPLSTDVPPVA------------------- 135

Query: 231 VGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS 290
            GP T     +P    T E ++  +      + DAR+   + G+     KG   GH+PG+
Sbjct: 136 GGPVTLTLHDEPTA--TREYLQSRLGAADLAIWDARAPTEYSGEKVVAAKG---GHIPGA 190

Query: 291 KCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGT 332
               +   +D ++ L    ++ +     GI+ +K V+T C T
Sbjct: 191 VNFEWTAGMDKARNLRIRQDMPEILRDLGITPDKEVITHCQT 232

Length = 610

>gnl|CDD|238722 cd01445, TST_Repeats, Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

 Score = 50.6 bits (120), Expect = 8e-08
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 16/115 (13%)

Query: 246 WTLEQVKRNIEEGTYQLVDAR--------SKARFDGDAPEPRK-GIRSGHVPGSKCIPFP 296
              E ++       +QL+DAR        ++  +    PEP   G+ SGH+PG+    F 
Sbjct: 5   QLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFE 64

Query: 297 QMLDAS---QTLLPAD-ELKKRFEQEGISLEKPVVTACG---TGVTACILALVLF 344
           + LD +   +++ P++ E    FE +GI L+K ++   G    G TAC +AL   
Sbjct: 65  ECLDEAGFEESMEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAAR 119

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats. Length = 138

>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 24/94 (25%)

Query: 250 QVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           ++K  +++    L+D R    +            +GH+PG+  IP               
Sbjct: 1   ELKELLDDEDAVLLDVREPEEYA-----------AGHIPGAINIPL-------------S 36

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           EL++R     +  +KP+V  C +G  +   A +L
Sbjct: 37  ELEERAALLELDKDKPIVVYCRSGNRSARAAKLL 70

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. Length = 89

>gnl|CDD|238726 cd01449, TST_Repeat_2, Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 29/128 (22%)

Query: 78  VSVDWLHANLREPDLKVLDA-SWYMPDE---QRNPFQEYQVA-HIPGALFFDVDGVADRT 132
           V+ + + ANL   D++++DA S   P+    +    +    + HIPGA+           
Sbjct: 1   VTAEEVLANLDSGDVQLVDARS---PERFRGEVPEPRPGLRSGHIPGAV----------- 46

Query: 133 TNLPH--------MLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHD 184
            N+P            S E   A  +ALG+     ++VY G G+ +A  +     + G+ 
Sbjct: 47  -NIPWTSLLDEDGTFKSPEELRALFAALGITPDKPVIVYCGSGV-TACVLLLALELLGYK 104

Query: 185 RVWVLDGG 192
            V + DG 
Sbjct: 105 NVRLYDGS 112

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue. Length = 118

>gnl|CDD|238089 cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

 Score = 46.5 bits (111), Expect = 6e-07
 Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 29/117 (24%)

Query: 82  WLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPS 141
            L   L + D  +LD         R P  EY   HIPGA+   +  + +R          
Sbjct: 1   ELKELLDDEDAVLLDV--------REPE-EYAAGHIPGAINIPLSELEER---------- 41

Query: 142 EEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR 197
                   +AL   +KD  +VVY   G   +AR   + R  G   V+ L+GG+  W+
Sbjct: 42  --------AALLELDKDKPIVVYCRSGN-RSARAAKLLRKAGGTNVYNLEGGMLAWK 89

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins. Length = 89

>gnl|CDD|238782 cd01524, RHOD_Pyr_redox, Member of the Rhodanese Homology Domain superfamily

 Score = 38.0 bits (89), Expect = 7e-04
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 26/91 (28%)

Query: 253 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK 312
            N       L+D R+   F             GH+ G+  IP              DEL+
Sbjct: 7   DNYRADGVTLIDVRTPQEF-----------EKGHIKGAINIPL-------------DELR 42

Query: 313 KRFEQEGISLEKPVVTACGTGVTACILALVL 343
            R  +  +  +K ++  C  G+   I A +L
Sbjct: 43  DRLNE--LPKDKEIIVYCAVGLRGYIAARIL 71

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain. Length = 90

>gnl|CDD|225450 COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 30/135 (22%), Positives = 49/135 (36%), Gaps = 26/135 (19%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ----------VAHIPGAL- 121
             + VV    +   L  P + ++DA        R+P + ++            HIPGA+ 
Sbjct: 153 NVKAVVDATLVADALEVPAVLLIDA--------RSP-ERFRGKEPEPRDGKAGHIPGAIN 203

Query: 122 FFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF 181
               D V D       +  S E  A   +  G++    ++VY G G+  A+  W      
Sbjct: 204 IPWTDLVDDG-----GLFKSPEEIARLYADAGIDPDKEVIVYCGSGV-RASVTWLALAEL 257

Query: 182 GHDRVWVLDGGLPRW 196
           G     + DG    W
Sbjct: 258 GGPNNRLYDGSWSEW 272

Length = 285

>gnl|CDD|238777 cd01519, RHOD_HSP67B2, Member of the Rhodanese Homology Domain superfamily

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 16/93 (17%)

Query: 246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 303
           ++ E+VK           L+D R          EP + +++G +PG+  IP   + DA  
Sbjct: 1   YSFEEVKNLPNPHPNKV-LIDVR----------EPEE-LKTGKIPGAINIPLSSLPDALA 48

Query: 304 TLLPADELKKRFEQEGISLEKPVVTACGTGVTA 336
             L  +E +K++     S +K ++  C  GV +
Sbjct: 49  --LSEEEFEKKYGFPKPSKDKELIFYCKAGVRS 79

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized. Length = 106

>gnl|CDD|238721 cd01444, GlpE_ST, GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

 Score = 36.1 bits (84), Expect = 0.003
 Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 20/83 (24%)

Query: 116 HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVW 175
           HIPGA+  D D + D           +      V           VVY   G  S+A++ 
Sbjct: 34  HIPGAIHLDEDSLDD--------WLGDLDRDRPV-----------VVYCYHGN-SSAQLA 73

Query: 176 WMFRVFGHDRVWVLDGGLPRWRA 198
              R  G   V  L GG   WR 
Sbjct: 74  QALREAGFTDVRSLAGGFEAWRR 96

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine. Length = 96

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	349
PLN02723	320	3-mercaptopyruvate sulfurtransferase	100.0
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	100.0
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	100.0
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	100.0
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	100.0
cd01445	138	TST_Repeats Thiosulfate sulfurtransferases (TST) c	99.93
cd01448	122	TST_Repeat_1 Thiosulfate sulfurtransferase (TST),	99.9
cd01449	118	TST_Repeat_2 Thiosulfate sulfurtransferase (TST),	99.86
cd01519	106	RHOD_HSP67B2 Member of the Rhodanese Homology Doma	99.86
TIGR03865	162	PQQ_CXXCW PQQ-dependent catabolism-associated CXXC	99.85
cd01533	109	4RHOD_Repeat_2 Member of the Rhodanese Homology Do	99.84
cd01520	128	RHOD_YbbB Member of the Rhodanese Homology Domain	99.84
PLN02723	320	3-mercaptopyruvate sulfurtransferase	99.83
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	99.82
cd01518	101	RHOD_YceA Member of the Rhodanese Homology Domain	99.82
PRK11784	345	tRNA 2-selenouridine synthase; Provisional	99.81
cd01525	105	RHOD_Kc Member of the Rhodanese Homology Domain su	99.81
PRK00162	108	glpE thiosulfate sulfurtransferase; Validated	99.8
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	99.79
cd01527	99	RHOD_YgaP Member of the Rhodanese Homology Domain	99.79
PRK09629	610	bifunctional thiosulfate sulfurtransferase/phospha	99.79
smart00450	100	RHOD Rhodanese Homology Domain. An alpha beta fold	99.79
PRK11493	281	sseA 3-mercaptopyruvate sulfurtransferase; Provisi	99.78
cd01447	103	Polysulfide_ST Polysulfide-sulfurtransferase - Rho	99.78
cd01534	95	4RHOD_Repeat_3 Member of the Rhodanese Homology Do	99.78
cd01521	110	RHOD_PspE2 Member of the Rhodanese Homology Domain	99.78
cd01449	118	TST_Repeat_2 Thiosulfate sulfurtransferase (TST),	99.78
cd01526	122	RHOD_ThiF Member of the Rhodanese Homology Domain	99.78
PLN02160	136	thiosulfate sulfurtransferase	99.77
cd01528	101	RHOD_2 Member of the Rhodanese Homology Domain sup	99.77
PF00581	113	Rhodanese: Rhodanese-like domain This Prosite entr	99.77
COG2897	285	SseA Rhodanese-related sulfurtransferase [Inorgani	99.76
cd01529	96	4RHOD_Repeats Member of the Rhodanese Homology Dom	99.75
cd01530	121	Cdc25 Cdc25 phosphatases are members of the Rhodan	99.75
cd01524	90	RHOD_Pyr_redox Member of the Rhodanese Homology Do	99.75
cd01444	96	GlpE_ST GlpE sulfurtransferase (ST) and homologs a	99.74
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	99.74
cd01445	138	TST_Repeats Thiosulfate sulfurtransferases (TST) c	99.74
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	99.73
cd01523	100	RHOD_Lact_B Member of the Rhodanese Homology Domai	99.73
cd01535	145	4RHOD_Repeat_4 Member of the Rhodanese Homology Do	99.73
cd01522	117	RHOD_1 Member of the Rhodanese Homology Domain sup	99.72
cd01531	113	Acr2p Eukaryotic arsenate resistance proteins are	99.71
cd01532	92	4RHOD_Repeat_1 Member of the Rhodanese Homology Do	99.7
cd01443	113	Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda	99.68
cd00158	89	RHOD Rhodanese Homology Domain (RHOD); an alpha be	99.68
cd01446	132	DSP_MapKP N-terminal regulatory rhodanese domain o	99.67
cd01519	106	RHOD_HSP67B2 Member of the Rhodanese Homology Doma	99.67
cd01448	122	TST_Repeat_1 Thiosulfate sulfurtransferase (TST),	99.65
PRK00142	314	putative rhodanese-related sulfurtransferase; Prov	99.64
cd01518	101	RHOD_YceA Member of the Rhodanese Homology Domain	99.64
TIGR02981	101	phageshock_pspE phage shock operon rhodanese PspE.	99.63
PRK10287	104	thiosulfate:cyanide sulfurtransferase; Provisional	99.63
PRK01415	247	hypothetical protein; Validated	99.62
cd01533	109	4RHOD_Repeat_2 Member of the Rhodanese Homology Do	99.62
cd01520	128	RHOD_YbbB Member of the Rhodanese Homology Domain	99.61
COG0607	110	PspE Rhodanese-related sulfurtransferase [Inorgani	99.6
PRK05320	257	rhodanese superfamily protein; Provisional	99.6
PLN02160	136	thiosulfate sulfurtransferase	99.57
cd01523	100	RHOD_Lact_B Member of the Rhodanese Homology Domai	99.56
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	99.56
cd01526	122	RHOD_ThiF Member of the Rhodanese Homology Domain	99.56
cd01534	95	4RHOD_Repeat_3 Member of the Rhodanese Homology Do	99.55
KOG1530	136	consensus Rhodanese-related sulfurtransferase [Ino	99.53
cd01522	117	RHOD_1 Member of the Rhodanese Homology Domain sup	99.52
cd01527	99	RHOD_YgaP Member of the Rhodanese Homology Domain	99.52
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	99.5
cd01525	105	RHOD_Kc Member of the Rhodanese Homology Domain su	99.5
cd01447	103	Polysulfide_ST Polysulfide-sulfurtransferase - Rho	99.5
cd01528	101	RHOD_2 Member of the Rhodanese Homology Domain sup	99.48
cd01524	90	RHOD_Pyr_redox Member of the Rhodanese Homology Do	99.48
PRK07411	390	hypothetical protein; Validated	99.48
TIGR03865	162	PQQ_CXXCW PQQ-dependent catabolism-associated CXXC	99.47
cd01444	96	GlpE_ST GlpE sulfurtransferase (ST) and homologs a	99.47
smart00450	100	RHOD Rhodanese Homology Domain. An alpha beta fold	99.46
cd01530	121	Cdc25 Cdc25 phosphatases are members of the Rhodan	99.45
PF00581	113	Rhodanese: Rhodanese-like domain This Prosite entr	99.45
PRK00162	108	glpE thiosulfate sulfurtransferase; Validated	99.44
TIGR02981	101	phageshock_pspE phage shock operon rhodanese PspE.	99.42
cd01529	96	4RHOD_Repeats Member of the Rhodanese Homology Dom	99.41
PRK10287	104	thiosulfate:cyanide sulfurtransferase; Provisional	99.41
cd01521	110	RHOD_PspE2 Member of the Rhodanese Homology Domain	99.4
cd00158	89	RHOD Rhodanese Homology Domain (RHOD); an alpha be	99.32
PRK01415	247	hypothetical protein; Validated	99.31
cd01531	113	Acr2p Eukaryotic arsenate resistance proteins are	99.31
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	99.3
cd01443	113	Cdc25_Acr2p Cdc25 enzymes are members of the Rhoda	99.28
cd01532	92	4RHOD_Repeat_1 Member of the Rhodanese Homology Do	99.26
COG0607	110	PspE Rhodanese-related sulfurtransferase [Inorgani	99.24
PRK07411	390	hypothetical protein; Validated	99.22
PRK05320	257	rhodanese superfamily protein; Provisional	99.21
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	99.2
KOG1529	286	consensus Mercaptopyruvate sulfurtransferase/thios	99.19
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	99.16
cd01535	145	4RHOD_Repeat_4 Member of the Rhodanese Homology Do	99.14
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	99.1
PRK11784	345	tRNA 2-selenouridine synthase; Provisional	99.1
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	99.02
TIGR03167	311	tRNA_sel_U_synt tRNA 2-selenouridine synthase. The	98.97
cd01446	132	DSP_MapKP N-terminal regulatory rhodanese domain o	98.97
COG1054	308	Predicted sulfurtransferase [General function pred	98.96
KOG3772	325	consensus M-phase inducer phosphatase [Cell cycle	98.96
PRK01269	482	tRNA s(4)U8 sulfurtransferase; Provisional	98.86
PRK01269	482	tRNA s(4)U8 sulfurtransferase; Provisional	98.85
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	98.81
COG1054	308	Predicted sulfurtransferase [General function pred	98.33
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	98.28
COG5105	427	MIH1 Mitotic inducer, protein phosphatase [Cell di	98.22
KOG3772	325	consensus M-phase inducer phosphatase [Cell cycle	97.76
COG2603	334	Predicted ATPase [General function prediction only	96.28
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	96.25
KOG1717	343	consensus Dual specificity phosphatase [Defense me	96.0
PF04273	110	DUF442: Putative phosphatase (DUF442); InterPro: I	96.0
COG5105	427	MIH1 Mitotic inducer, protein phosphatase [Cell di	95.91
COG3453	130	Uncharacterized protein conserved in bacteria [Fun	93.81
KOG3636	669	consensus Uncharacterized conserved protein, conta	92.21
PF04273	110	DUF442: Putative phosphatase (DUF442); InterPro: I	87.94
KOG1093	725	consensus Predicted protein kinase (contains TBC a	86.85
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	85.82
PLN02727	986	NAD kinase	81.98

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=100.00  E-value=1.2e-57  Score=434.40  Aligned_cols=290  Identities=84%  Similarity=1.360  Sum_probs=259.6

Q ss_pred             ccCCCCCCCCCCCCCCCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCC
Q 018869           59 AAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHM  138 (349)
Q Consensus        59 ~~~~~~~~~~~~~~~~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~  138 (349)
                      .+.|.+.+++.+++.+..+|+++||++++++++++|||+|+.++.+.+++..+|..||||||+|+|++.+.+.....+++
T Consensus         5 ~~~~~~~~~~~~~~~~~~lvs~~~L~~~l~~~~~~IiDvr~~~~~~~r~~~~~y~~gHIPgAi~i~~~~~~~~~~~~~~~   84 (320)
T PLN02723          5 GSETKANYSTQSISTNEPVVSVDWLHANLREPDVKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDLDGISDRTTDLPHM   84 (320)
T ss_pred             chhhcccCcccccccCCceecHHHHHHHhcCCCeEEEEeeccccCCCCchHHHHHhccCCCCeecCHHHhcCCCCCcCCC
Confidence            56788889999888888999999999999888899999998777665555578999999999999998887766667889


Q ss_pred             CCCHHHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhh
Q 018869          139 LPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAA  218 (349)
Q Consensus       139 lp~~~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~  218 (349)
                      +|++++|+++++.+||+++++|||||+.|...++|+||+|+++||++|++||||+.+|+++|+|+++..+.++++++.++
T Consensus        85 lp~~~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG~~~W~~~G~pv~~~~~~~~~~~~~~~  164 (320)
T PLN02723         85 LPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGGLPKWRASGYDVESSASGDAILKASAA  164 (320)
T ss_pred             CCCHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCCHHHHHHcCCCcccCCCcccccccccc
Confidence            99999999999999999999999999888778899999999999999999999999999999999987654445555555


Q ss_pred             HHHHHHHhcCcccCCcceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccc
Q 018869          219 SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQM  298 (349)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l  298 (349)
                      ++.+++.+.++.+.+.+|..++++.++++.++|.+++++++.+|||+|++.||.|...++....+.||||||+|+||.++
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgAvnip~~~~  244 (320)
T PLN02723        165 SEAIEKVYQGQTVSPITFQTKFQPHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVPFPQM  244 (320)
T ss_pred             ccccccccccCCCCCCcccccCCccceecHHHHHHhhcCCCeEEEECCCcccccCCCCCCCCCCcCCcCCCCcccCHHHh
Confidence            66667766666667788988888999999999999998777889999999999998877766778999999999999999


Q ss_pred             cCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          299 LDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       299 ~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++.+++|++.+||+++|.+.|++++++||+||++|+||+.++++|+.+||
T Consensus       245 ~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~  294 (320)
T PLN02723        245 LDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGK  294 (320)
T ss_pred             cCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence            98888999999999999999999999999999999999999999999998

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=100.00  E-value=5.4e-56  Score=410.19  Aligned_cols=251  Identities=40%  Similarity=0.737  Sum_probs=231.1

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ...+|+++||.+++++++++++|+|+..++..  ...+|..||||||++++++.+.+....+++++|++++|+++|+++|
T Consensus         9 ~~~lVs~~wl~~~l~~~~~~~~d~~~~~~~~~--~~~~Y~~~HIPGAv~~d~~~~~~~~~~~~~~lp~~e~fa~~~~~~G   86 (285)
T COG2897           9 SEFLVSPDWLAENLDDPAVVIVDARIILPDPD--DAEEYLEGHIPGAVFFDWEADLSDPVPLPHMLPSPEQFAKLLGELG   86 (285)
T ss_pred             cceEEcHHHHHhhccccccccCceEEEeCCcc--hHHHHHhccCCCCEecCHHHhhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            57899999999999988888888887766643  2689999999999999999877766668999999999999999999


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCC
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (349)
                      |+++++||+|++.+++.|+|+||+|+++||+||++||||+.+|+++|+|+++.++                     ..++
T Consensus        87 I~~d~tVVvYdd~~~~~A~ra~W~l~~~Gh~~V~iLdGG~~~W~~~g~p~~~~~~---------------------~~~~  145 (285)
T COG2897          87 IRNDDTVVVYDDGGGFFAARAWWLLRYLGHENVRILDGGLPAWKAAGLPLETEPP---------------------EPPP  145 (285)
T ss_pred             CCCCCEEEEECCCCCeehHHHHHHHHHcCCCceEEecCCHHHHHHcCCCccCCCC---------------------CCCC
Confidence            9999999999998889999999999999999999999999999999999999763                     3466


Q ss_pred             cceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHH
Q 018869          234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  313 (349)
Q Consensus       234 ~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~  313 (349)
                      ..|..+++...+++.++++..++....+|||+|+++||.|+.++|+... .||||||+|+||.++++++..|++.++++.
T Consensus       146 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~liDaR~~~rf~G~~~ep~~~~-~GHIPGAiNipw~~~~~~~~~~~~~~~~~~  224 (285)
T COG2897         146 TTFSAKYNVKAVVDATLVADALEVPAVLLIDARSPERFRGKEPEPRDGK-AGHIPGAINIPWTDLVDDGGLFKSPEEIAR  224 (285)
T ss_pred             ccccccCCccccCCHHHHHHHhcCCCeEEEecCCHHHhCCCCCCCCCCC-CCCCCCCcCcCHHHHhcCCCccCcHHHHHH
Confidence            7888889999999999999999988899999999999999999998775 899999999999999997788999999999


Q ss_pred             HHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          314 RFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       314 ~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++..||+++++||+||++|+||+..+++|+.+|+
T Consensus       225 l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~  259 (285)
T COG2897         225 LYADAGIDPDKEVIVYCGSGVRASVTWLALAELGG  259 (285)
T ss_pred             HHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999886

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=100.00  E-value=1.5e-49  Score=372.80  Aligned_cols=253  Identities=38%  Similarity=0.761  Sum_probs=220.6

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCC-CCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQ-RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~-~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      ...+|+++||++++++++++|||+|....... .+...+|..||||||+|+|+..+.+.....++++|++++|+++++.+
T Consensus         3 ~~~lvs~~~l~~~l~~~~~~iiD~R~~~~~~~~~~~~~~y~~GHIpGA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (281)
T PRK11493          3 TTWFVAADWLAEHIDDPEIQIIDARMAPPGQEDRDVAAEYRAGHIPGAVFFDIEALSDHTSPLPHMMPRPETFAVAMREL   82 (281)
T ss_pred             cCcccCHHHHHHhcCCCCeEEEEeeCCCCCccccchHHHHHhCcCCCCEEcCHHHhcCCCCCCCCCCCCHHHHHHHHHHc
Confidence            34789999999999988899999994322111 11257899999999999999877665556678899999999999999


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccC
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVG  232 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (349)
                      |++++++|||||.++...+++++|+|+.+||+||++|+||+.+|.++|+|+++..+                     .+.
T Consensus        83 Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~---------------------~~~  141 (281)
T PRK11493         83 GVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVEKVSILAGGLAGWQRDDLLLEEGAV---------------------ELP  141 (281)
T ss_pred             CCCCCCEEEEECCCCCchHHHHHHHHHHhcCCcEEEcCCCHHHHHHcCCCccCCCC---------------------CCC
Confidence            99999999999987766789999999999999999999999999999999998753                     234


Q ss_pred             CcceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHH
Q 018869          233 PTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELK  312 (349)
Q Consensus       233 ~~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~  312 (349)
                      +.+|.+..++..+++.+++...+++++.+|||+|+++||.|...+|....+.||||||+|+||.++.+ ++.|+++++|+
T Consensus       142 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~llD~R~~~e~~G~~~~~~~~~~~GhIpgA~~i~~~~~~~-~~~~~~~~~l~  220 (281)
T PRK11493        142 EGEFNAAFNPEAVVRLTDVLLASHEKTAQIVDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELD  220 (281)
T ss_pred             CCcccccCCccceecHHHHHHhhcCCCcEEEeCCCccceeeeccCCCCCcccccCCCcCCCCHHHhcC-CCCcCCHHHHH
Confidence            66777777788899999999888777789999999999999877766566789999999999999875 46899999999


Q ss_pred             HHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          313 KRFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       313 ~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++|.+.|++++++||+||++|+||+.++++|+.+||
T Consensus       221 ~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~  256 (281)
T PRK11493        221 AIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDV  256 (281)
T ss_pred             HHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999998

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=100.00  E-value=3.8e-48  Score=394.87  Aligned_cols=242  Identities=24%  Similarity=0.385  Sum_probs=217.2

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ..++||++||++++++++++|||+|         +.++|..||||||+|+|++.+.......++++|+.++|++.++++|
T Consensus         7 ~~~lIs~~eL~~~l~~~~vvIIDvR---------~~~eY~~GHIPGAv~i~~~~~~~~~~~~~~~lp~~~~l~~~l~~lG   77 (610)
T PRK09629          7 LSLVIEPNDLLERLDAPELILVDLT---------SSARYEAGHIRGARFVDPKRTQLGKPPAPGLLPDTADLEQLFGELG   77 (610)
T ss_pred             CCceecHHHHHHHhcCCCEEEEECC---------ChHHHHhCCCCCcEEcChhHhhccCCCCCCCCCCHHHHHHHHHHcC
Confidence            4578999999999998889999999         6789999999999999987654444456789999999999999999


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCC
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (349)
                      |+++++|||||+.++..|+|+||+|+++||++|++||||+.+|+.+|+|++++.+                     ...+
T Consensus        78 I~~d~~VVvYd~~g~~~A~R~~w~L~~~G~~~V~iLdGG~~aW~~ag~p~~~~~~---------------------~~~~  136 (610)
T PRK09629         78 HNPDAVYVVYDDEGGGWAGRFIWLLDVIGHSGYHYLDGGVLAWEAQALPLSTDVP---------------------PVAG  136 (610)
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHcCCCCEEEcCCCHHHHHHcCCccccCCC---------------------CCCC
Confidence            9999999999988777899999999999999999999999999999999988753                     1234


Q ss_pred             cceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHH
Q 018869          234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  313 (349)
Q Consensus       234 ~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~  313 (349)
                      .+|..+.++..+++.+++.+++++++.+|||+|+++||.|+...   ..+.||||||+|+||.++++.++.++++++|++
T Consensus       137 ~~~~~~~~~~~~v~~e~v~~~l~~~~~~iIDaR~~~ef~G~~~~---~~r~GHIPGAvnip~~~~~~~~~~lk~~~el~~  213 (610)
T PRK09629        137 GPVTLTLHDEPTATREYLQSRLGAADLAIWDARAPTEYSGEKVV---AAKGGHIPGAVNFEWTAGMDKARNLRIRQDMPE  213 (610)
T ss_pred             cceeeccCCcccccHHHHHHhhCCCCcEEEECCCccccCCcccc---cccCCCCCCCeecCHHHhcCCCCCCCCHHHHHH
Confidence            56766777788999999999998778899999999999997642   347899999999999998888888999999999


Q ss_pred             HHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          314 RFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       314 ~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +|.+.|++++++||+||++|.||+.++++|+.+||
T Consensus       214 ~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~  248 (610)
T PRK09629        214 ILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGY  248 (610)
T ss_pred             HHHHcCCCCCCCEEEECCCChHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999998

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=100.00  E-value=1.2e-47  Score=347.02  Aligned_cols=255  Identities=44%  Similarity=0.809  Sum_probs=235.3

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ...+|+++|+.+++.+.+++|||+.|+++...++...+|..-|||||++|+++.+.+..++.++++|..+.|++.++.+|
T Consensus         3 ~~~iv~~~~v~~~~~~~~~~iLDaSw~~~~~~~~~~~e~~~~hipga~~fdld~~~~~s~~~~~~lp~~e~Fa~y~~~lG   82 (286)
T KOG1529|consen    3 VDSIVSVKWVMENLGNHGLRILDASWYFPPLRRIAEFEFLERHIPGASHFDLDIISYPSSPYRHMLPTAEHFAEYASRLG   82 (286)
T ss_pred             cccccChHHHHHhCcCCCeEEEeeeeecCchhhhhhhhhhhccCCCceeeeccccccCCCcccccCccHHHHHHHHHhcC
Confidence            35789999999999988899999999999888888899999999999999999999999999999999999999999999


Q ss_pred             CCCCCcEEEECC--CCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCccc
Q 018869          154 LENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVV  231 (349)
Q Consensus       154 i~~~~~VVvy~~--~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (349)
                      +++++.+|||+.  .|.+.|+|+||+|+.+||++|++||||+.+|++.|+|++++...-                  |. 
T Consensus        83 i~n~d~vViYd~~~~Gm~~Asrv~W~fr~fGh~~VslL~GG~~~Wk~~g~~~~s~~~~~------------------p~-  143 (286)
T KOG1529|consen   83 VDNGDHVVIYDRGDGGMFSASRVWWTFRVFGHTKVSLLNGGFRAWKAAGGPVDSSKVET------------------PY-  143 (286)
T ss_pred             CCCCCeEEEEcCCCcceeehhhHHHHHHHhCccEEEEecCcHHHHHHcCCccccccccC------------------CC-
Confidence            999999999998  788899999999999999999999999999999999999976410                  00 


Q ss_pred             CCcceeeccCCccccCHHHHHHH-hhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHH
Q 018869          232 GPTTFQTKFQPHLIWTLEQVKRN-IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE  310 (349)
Q Consensus       232 ~~~~~~~~~~~~~~i~~~~v~~~-~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~e  310 (349)
                      .+..+...++..++++.+++..+ .+.+++++||+|+.++|+|+.++|+.+...||||||+|+|+.+++++++..++++|
T Consensus       144 ~~~~~~~~~d~~il~~~edi~~n~~~~~~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpGa~n~P~~~~~~~~g~~k~~ed  223 (286)
T KOG1529|consen  144 SPIVFVASLDNSILATLEDIPFNNLATKNFQYLDARSKGRFDGTEPEPRSGATGGHIPGAINFPFDEVLDPDGFIKPAED  223 (286)
T ss_pred             CCccchhhcchHHHHHHhhccccccccccceeeeccccccccccCCCCcccCcCccCCCcccCChHHhcccccccCCHHH
Confidence            23445566788889999998877 67788999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCc
Q 018869          311 LKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVF  347 (349)
Q Consensus       311 l~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g  347 (349)
                      |+..|.++++..++|||+.|++|++|++.+.+|.+.|
T Consensus       224 l~~~f~~~~l~~~~p~~~sC~~Gisa~~i~~al~r~g  260 (286)
T KOG1529|consen  224 LKHLFAQKGLKLSKPVIVSCGTGISASIIALALERSG  260 (286)
T ss_pred             HHHHHHhcCcccCCCEEEeeccchhHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999887

>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

Probab=99.93  E-value=2.8e-25  Score=186.71  Aligned_cols=119  Identities=37%  Similarity=0.544  Sum_probs=102.3

Q ss_pred             ccHHHHHHhcC----CCCcEEEEeccCCCCCCCCChhhhhc------------CCCCCceecCcccccccCCCCCCCCCC
Q 018869           78 VSVDWLHANLR----EPDLKVLDASWYMPDEQRNPFQEYQV------------AHIPGALFFDVDGVADRTTNLPHMLPS  141 (349)
Q Consensus        78 Is~~~L~~~l~----~~~~~iIDvR~~~~~~~~~~~~~y~~------------GHIPGAi~ip~~~l~~~~~~~~~~lp~  141 (349)
                      ||++||+++++    +++++|||+|+.+++. ++..++|..            ||||||+|+|+..+.+.......++|+
T Consensus         1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~-~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~~~~~~~~~~~p~   79 (138)
T cd01445           1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGT-REARGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAGFEESMEPS   79 (138)
T ss_pred             CCHHHHHHHhhccccCCCeEEEEccCCCccC-cchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhhCcCCCCCCCCCC
Confidence            68999999998    4679999999655543 334478887            999999999998776555556678999


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEECCC--CcchHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          142 EEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       142 ~~~~~~~~~~~gi~~~~~VVvy~~~--g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      .++|+++++.+||+++++||+||..  ++..|+|+||+|+++||+||++||||+.+|+
T Consensus        80 ~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildGG~~~W~  137 (138)
T cd01445          80 EAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDGGFFEWF  137 (138)
T ss_pred             HHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCCCHHHhh
Confidence            9999999999999999999999974  4568999999999999999999999999996

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.

>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

Probab=99.90  E-value=6.6e-23  Score=168.47  Aligned_cols=122  Identities=54%  Similarity=1.039  Sum_probs=101.8

Q ss_pred             cccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 018869           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (349)
Q Consensus        77 lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~  156 (349)
                      +|++++|++++.+++.+|||+|.....  .....+|..||||||+|+|+..+........+++++.++|++.++.+++++
T Consensus         1 ~i~~~~l~~~l~~~~~~ivDvR~~~~~--~~~~~~~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (122)
T cd01448           1 LVSPDWLAEHLDDPDVRILDARWYLPD--RDGRKEYLEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFAELLGSLGISN   78 (122)
T ss_pred             CcCHHHHHHHhCCCCeEEEEeecCCCC--CchhhHHhhCCCCCCEEcChhhccccCCCCCCCCCCHHHHHHHHHHcCCCC
Confidence            488999999998777899999921000  001178999999999999998765433345678999999999999999999


Q ss_pred             CCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCC
Q 018869          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (349)
Q Consensus       157 ~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G  200 (349)
                      +++|||||..|+.++++++++|+.+||++|++|+||+.+|..+|
T Consensus        79 ~~~vv~~c~~g~~~a~~~~~~l~~~G~~~v~~l~GG~~~W~~~g  122 (122)
T cd01448          79 DDTVVVYDDGGGFFAARAWWTLRYFGHENVRVLDGGLQAWKAEG  122 (122)
T ss_pred             CCEEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHhCc
Confidence            99999999876568999999999999999999999999998764

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.

>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

Probab=99.86  E-value=1.7e-21  Score=159.04  Aligned_cols=106  Identities=27%  Similarity=0.482  Sum_probs=93.1

Q ss_pred             ccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhc-----------CCCCCceecCcccccccCCCCCCCCCCHHHHH
Q 018869           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV-----------AHIPGALFFDVDGVADRTTNLPHMLPSEEAFA  146 (349)
Q Consensus        78 Is~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~-----------GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~  146 (349)
                      ||+++|.+++++.+++|||+|         +..+|..           ||||||+|+|+.++....    +.++++++|.
T Consensus         1 ~s~~~l~~~l~~~~~~iiDvR---------~~~e~~~~~~~~~~~~~~ghIpgA~~~p~~~~~~~~----~~~~~~~~~~   67 (118)
T cd01449           1 VTAEEVLANLDSGDVQLVDAR---------SPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDED----GTFKSPEELR   67 (118)
T ss_pred             CCHHHHHHhcCCCCcEEEeCC---------CHHHcCCcCCCCCCCCcCCcCCCCcccChHHhcCCC----CCcCCHHHHH
Confidence            578999999877678999999         5667765           999999999998765432    4678899999


Q ss_pred             HHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          147 AAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       147 ~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      +.+..++++++++||+||..| .+|.++++.|+.+||++|++|+||+.+|.
T Consensus        68 ~~~~~~~~~~~~~iv~yc~~g-~~s~~~~~~l~~~G~~~v~~l~GG~~~W~  117 (118)
T cd01449          68 ALFAALGITPDKPVIVYCGSG-VTACVLLLALELLGYKNVRLYDGSWSEWG  117 (118)
T ss_pred             HHHHHcCCCCCCCEEEECCcH-HHHHHHHHHHHHcCCCCeeeeCChHHHhc
Confidence            999999999999999999875 48999999999999999999999999996

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.

>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily

Probab=99.86  E-value=1.4e-21  Score=156.30  Aligned_cols=104  Identities=21%  Similarity=0.309  Sum_probs=91.4

Q ss_pred             cHHHHHHhcC-CCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869           79 SVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  157 (349)
Q Consensus        79 s~~~L~~~l~-~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~  157 (349)
                      |+++++++++ .++++|||+|         +..+|..||||||+|+|+..+.+.      ..+++++|++.++..+++++
T Consensus         2 ~~~~~~~~l~~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~~~~~------~~~~~~~~~~~~~~~~~~~~   66 (106)
T cd01519           2 SFEEVKNLPNPHPNKVLIDVR---------EPEELKTGKIPGAINIPLSSLPDA------LALSEEEFEKKYGFPKPSKD   66 (106)
T ss_pred             cHHHHHHhcCCCCCEEEEECC---------CHHHHhcCcCCCcEEechHHhhhh------hCCCHHHHHHHhcccCCCCC
Confidence            6789999887 6679999999         788999999999999999876432      34567889999999999999


Q ss_pred             CcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          158 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       158 ~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      ++||+||..|. ++.+++++|+.+||+||++|+||+.+|.+
T Consensus        67 ~~ivv~c~~g~-~s~~~~~~l~~~G~~~v~~~~Gg~~~W~~  106 (106)
T cd01519          67 KELIFYCKAGV-RSKAAAELARSLGYENVGNYPGSWLDWAA  106 (106)
T ss_pred             CeEEEECCCcH-HHHHHHHHHHHcCCccceecCCcHHHHcC
Confidence            99999998765 79999999999999999999999999963

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein

Probab=99.85  E-value=5.5e-21  Score=164.89  Aligned_cols=115  Identities=17%  Similarity=0.241  Sum_probs=91.8

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChh----hhhc---------CCCCCceecCcccccccCCCCCCCCC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQ----EYQV---------AHIPGALFFDVDGVADRTTNLPHMLP  140 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~----~y~~---------GHIPGAi~ip~~~l~~~~~~~~~~lp  140 (349)
                      ....|+++|+++++++++.+|||||         +.+    +|..         +|||||+|+|+..+....      -+
T Consensus        34 ~~~~vs~~el~~~l~~~~~~lIDVR---------~~~~~~~e~~~G~~~~~~~~~HIPGAv~ip~~~~~~l~------~~   98 (162)
T TIGR03865        34 GARVLDTEAAQALLARGPVALIDVY---------PRPPKPKNLLEGTVWRDEPRLNIPGSLWLPNTGYGNLA------PA   98 (162)
T ss_pred             CccccCHHHHHHHHhCCCcEEEECC---------CCccccccccccceeccccCCCCCCcEEecccCCCCCC------Cc
Confidence            4578999999999988788999999         222    3433         599999999964322111      12


Q ss_pred             CHHHHHHHHHHcCC-CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCc
Q 018869          141 SEEAFAAAVSALGL-ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (349)
Q Consensus       141 ~~~~~~~~~~~~gi-~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv  203 (349)
                      ..+.|.+.+..+++ +++++||+||..|+.++.+++|+|+.+||+||++|+||+.+|+++|+|+
T Consensus        99 ~~~~~~~~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~G~~~V~~l~GG~~aW~~aG~Pv  162 (162)
T TIGR03865        99 WQAYFRRGLERATGGDKDRPLVFYCLADCWMSWNAAKRALAYGYSNVYWYPDGTDGWQAAGLPL  162 (162)
T ss_pred             hhHHHHHHHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhcCCcceEEecCCHHHHHHcCCCC
Confidence            33457788877665 7999999999987767999999999999999999999999999999985

Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2

Probab=99.84  E-value=1.5e-20  Score=151.50  Aligned_cols=100  Identities=26%  Similarity=0.280  Sum_probs=86.1

Q ss_pred             CCCcccHHHHHHhcCCC-CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           74 KEPVVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~-~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      ..+.|++++|.+.+++. +.+|||+|         +..+|..||||||+|+|+.                 +|...++.+
T Consensus         8 ~~~~i~~~~l~~~~~~~~~~~liDvR---------~~~e~~~ghIpgainip~~-----------------~l~~~~~~l   61 (109)
T cd01533           8 HTPSVSADELAALQARGAPLVVLDGR---------RFDEYRKMTIPGSVSCPGA-----------------ELVLRVGEL   61 (109)
T ss_pred             cCCcCCHHHHHHHHhcCCCcEEEeCC---------CHHHHhcCcCCCceeCCHH-----------------HHHHHHHhc
Confidence            34679999999988754 57899999         7899999999999999985                 345566777


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCc-eeEeCCCHHHHHhCC
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLPRWRASG  200 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~-V~~L~GG~~~W~~~G  200 (349)
                      +.+++++|||||..|. ++..+++.|+.+||+| |++|+||+.+|..+|
T Consensus        62 ~~~~~~~ivv~C~~G~-rs~~a~~~L~~~G~~~~v~~l~gG~~~W~~~g  109 (109)
T cd01533          62 APDPRTPIVVNCAGRT-RSIIGAQSLINAGLPNPVAALRNGTQGWTLAG  109 (109)
T ss_pred             CCCCCCeEEEECCCCc-hHHHHHHHHHHCCCCcceeEecCCHHHHHhcC
Confidence            7778899999998776 7889999999999988 999999999999765

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.

>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily

Probab=99.84  E-value=1.2e-20  Score=156.61  Aligned_cols=109  Identities=23%  Similarity=0.384  Sum_probs=83.1

Q ss_pred             ccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCC--------------CCCCCCCCHH
Q 018869           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--------------NLPHMLPSEE  143 (349)
Q Consensus        78 Is~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~--------------~~~~~lp~~~  143 (349)
                      ||++||+++++ ++.+|||||         +..+|..||||||+|+|+..+.....              .++.++++ .
T Consensus         1 ~s~~el~~~l~-~~~~iiDvR---------~~~e~~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   69 (128)
T cd01520           1 ITAEDLLALRK-ADGPLIDVR---------SPKEFFEGHLPGAINLPLLDDEERALVGTLYKQQGREAAIELGLELVS-G   69 (128)
T ss_pred             CCHHHHHHHHh-cCCEEEECC---------CHHHhccCcCCCcEEccCCChhHHHHhhhheeccCHHHHHHHHHHHHh-h
Confidence            68999999987 578999999         78999999999999999964321100              00011111 2


Q ss_pred             HHHHHHH---HcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          144 AFAAAVS---ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       144 ~~~~~~~---~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      .+++.+.   ..|++++++|||||+.++.+|.+++|+|+.+|| +|++|+||+.+|++
T Consensus        70 ~~~~~~~~~~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~-~v~~L~GG~~aw~~  126 (128)
T cd01520          70 KLKRILNEAWEARLERDPKLLIYCARGGMRSQSLAWLLESLGI-DVPLLEGGYKAYRK  126 (128)
T ss_pred             hHHHHHHHHHHhccCCCCeEEEEeCCCCccHHHHHHHHHHcCC-ceeEeCCcHHHHHh
Confidence            2334433   358999999999997555689999999999999 69999999999974

This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.

>PLN02723 3-mercaptopyruvate sulfurtransferase

Probab=99.83  E-value=3.2e-20  Score=177.17  Aligned_cols=129  Identities=20%  Similarity=0.298  Sum_probs=102.8

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccC--CCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWY--MPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~--~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~  151 (349)
                      ...+++.+++.+.+++++.+|||+|..  +.....++...+..||||||+|+|+..+.+..    +.+++.++|++.+..
T Consensus       188 ~~~~~~~~~v~~~~~~~~~~iiD~R~~~ef~G~~~~~~~~~~~GHIPgAvnip~~~~~~~~----~~~~~~~el~~~~~~  263 (320)
T PLN02723        188 PHLVWTLEQVKKNIEDKTYQHIDARSKARFDGAAPEPRKGIRSGHIPGSKCVPFPQMLDSS----QTLLPAEELKKRFEQ  263 (320)
T ss_pred             ccceecHHHHHHhhcCCCeEEEECCCcccccCCCCCCCCCCcCCcCCCCcccCHHHhcCCC----CCCCCHHHHHHHHHh
Confidence            345789999999998778899999921  00000011223478999999999998765432    467889999999999


Q ss_pred             cCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhC-CCCcccCC
Q 018869          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS-GYDVESSA  207 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~-G~pv~~~~  207 (349)
                      +|++++++||+||..|. +|++++++|+.+||+||++|+|||.+|... ..|++++.
T Consensus       264 ~gi~~~~~iv~yC~sG~-~A~~~~~~L~~~G~~~v~~YdGs~~eW~~~~~~Pv~~~~  319 (320)
T PLN02723        264 EGISLDSPIVASCGTGV-TACILALGLHRLGKTDVPVYDGSWTEWGALPDTPVATST  319 (320)
T ss_pred             cCCCCCCCEEEECCcHH-HHHHHHHHHHHcCCCCeeEeCCCHHHHhcCCCCCccCCC
Confidence            99999999999998765 899999999999999999999999999865 57877653

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=99.82  E-value=1.5e-19  Score=170.92  Aligned_cols=192  Identities=15%  Similarity=0.210  Sum_probs=128.5

Q ss_pred             CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCC--C-C-----------CCCCC--C-HHHHHHHHHHcC
Q 018869           91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--N-L-----------PHMLP--S-EEAFAAAVSALG  153 (349)
Q Consensus        91 ~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~--~-~-----------~~~lp--~-~~~~~~~~~~~g  153 (349)
                      +.+|||||         ++.||..||||||+|+|+........  . +           ...+.  . ++.+.+++... 
T Consensus         2 ~~~liDVR---------sp~Ef~~ghipgAiniPl~~~~er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~~-   71 (311)
T TIGR03167         2 FDPLIDVR---------SPAEFAEGHLPGAINLPLLNDEERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAFA-   71 (311)
T ss_pred             CCEEEECC---------CHHHHhcCCCcCCEecccccchhhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhhc-
Confidence            45899999         88999999999999999954221100  0 0           00000  0 11233333332 


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCC
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (349)
                       +++..|||||+.++.+|.+++|.|+.+|| +|++|+||+.+|...+.+.....+                       .+
T Consensus        72 -~~~~~vvvyC~~gG~RS~~aa~~L~~~G~-~v~~L~GG~~aw~~~~~~~~~~~~-----------------------~~  126 (311)
T TIGR03167        72 -DGPPQPLLYCWRGGMRSGSLAWLLAQIGF-RVPRLEGGYKAYRRFVIDQLEELP-----------------------QP  126 (311)
T ss_pred             -CCCCcEEEEECCCChHHHHHHHHHHHcCC-CEEEecChHHHHHHhhhhhhhccC-----------------------CC
Confidence             34455999997666689999999999999 699999999999998886655421                       11


Q ss_pred             cceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccC-CCcccCcccccCCCCCCCCHHHHH
Q 018869          234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVP-GSKCIPFPQMLDASQTLLPADELK  312 (349)
Q Consensus       234 ~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIP-GA~~ip~~~l~~~~~~l~~~~el~  312 (349)
                      .++.. +.....+...+|.+.+...+.+|||+|+..+|.|.        ..|||| |.  -|-...      |  ...|-
T Consensus       127 ~~~~v-l~g~tg~gKt~Ll~~L~~~~~~VvDlr~~a~hrGs--------~fG~~~~~~--qpsq~~------f--e~~L~  187 (311)
T TIGR03167       127 FPLIV-LGGMTGSGKTELLHALANAGAQVLDLEGLANHRGS--------SFGALGLGP--QPSQKR------F--ENALA  187 (311)
T ss_pred             Cceec-cCCCCCcCHHHHHHHHhcCCCeEEECCchHHhcCc--------ccCCCCCCC--CCchHH------H--HHHHH
Confidence            22222 23345688999999998878899999999999775        459998 42  121111      1  12333


Q ss_pred             HHHHHcCCCCCCCEEEEcCChHHHHH
Q 018869          313 KRFEQEGISLEKPVVTACGTGVTACI  338 (349)
Q Consensus       313 ~~~~~~~i~~~~~vivyC~~G~rA~~  338 (349)
                      ..+.  .++++++|++-|.+..-+..
T Consensus       188 ~~l~--~~~~~~~i~~e~es~~ig~~  211 (311)
T TIGR03167       188 EALR--RLDPGRPIFVEDESRRIGRV  211 (311)
T ss_pred             HHHH--hCCCCceEEEEeCchhhccc
Confidence            3443  36778899999988766554

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily

Probab=99.82  E-value=4.7e-20  Score=146.53  Aligned_cols=99  Identities=22%  Similarity=0.329  Sum_probs=80.5

Q ss_pred             CcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 018869           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (349)
Q Consensus        76 ~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~  155 (349)
                      ..|+++++.+++++++++|||||         ++.+|+.||||||+|+|+..+...          .+.+.+.+   ..+
T Consensus         2 ~~is~~~l~~~~~~~~~~iiDvR---------~~~e~~~ghi~gA~~ip~~~~~~~----------~~~~~~~~---~~~   59 (101)
T cd01518           2 TYLSPAEWNELLEDPEVVLLDVR---------NDYEYDIGHFKGAVNPDVDTFREF----------PFWLDENL---DLL   59 (101)
T ss_pred             CcCCHHHHHHHHcCCCEEEEEcC---------ChhhhhcCEeccccCCCcccHhHh----------HHHHHhhh---hhc
Confidence            46899999999987789999999         788999999999999999765321          11222222   236


Q ss_pred             CCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       156 ~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      ++++|||||..|. ++..+++.|+.+||++|++|+||+.+|.
T Consensus        60 ~~~~ivvyC~~G~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~  100 (101)
T cd01518          60 KGKKVLMYCTGGI-RCEKASAYLKERGFKNVYQLKGGILKYL  100 (101)
T ss_pred             CCCEEEEECCCch-hHHHHHHHHHHhCCcceeeechhHHHHh
Confidence            8899999998776 7788888899999999999999999996

This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.

>PRK11784 tRNA 2-selenouridine synthase; Provisional

Probab=99.81  E-value=2.7e-19  Score=171.45  Aligned_cols=168  Identities=19%  Similarity=0.191  Sum_probs=116.1

Q ss_pred             cHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccC---------C-----CCCCCCCCHHH
Q 018869           79 SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT---------T-----NLPHMLPSEEA  144 (349)
Q Consensus        79 s~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~---------~-----~~~~~lp~~~~  144 (349)
                      ..+++.+.+. ++.+|||||         ++.||..||||||+|+|+.......         .     ...+.+++++.
T Consensus         4 ~~~~~~~~~~-~~~~lIDVR---------sp~Ef~~ghIpgAiniPl~~~~er~~vgt~Ykq~g~~~a~~lg~~lv~~~l   73 (345)
T PRK11784          4 DAQDFRALFL-NDTPLIDVR---------SPIEFAEGHIPGAINLPLLNDEERAEVGTCYKQQGQFAAIALGHALVAGNI   73 (345)
T ss_pred             cHHHHHHHHh-CCCEEEECC---------CHHHHhcCCCCCeeeCCCCChhHHHhhchhhcccCHHHHHHhhhhhcchhH
Confidence            3456665544 368999999         7899999999999999995432110         0     02234444322


Q ss_pred             HHHHHHHcCC--CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHH
Q 018869          145 FAAAVSALGL--ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAI  222 (349)
Q Consensus       145 ~~~~~~~~gi--~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~  222 (349)
                      .+.+...++.  +++++|||||..|+.+|.+++|+|+.+|| +|++|+||+.+|.+.+.+.....+              
T Consensus        74 ~~~~~~~~~~~~~~~~~ivvyC~rgG~RS~~aa~~L~~~G~-~v~~L~GG~~awr~~~~~~~~~~~--------------  138 (345)
T PRK11784         74 AAHREEAWADFPRANPRGLLYCWRGGLRSGSVQQWLKEAGI-DVPRLEGGYKAYRRFVIDTLEEAP--------------  138 (345)
T ss_pred             HHHHHHHHHhcccCCCeEEEEECCCChHHHHHHHHHHHcCC-CcEEEcCCHHHHHHhhHHHHhhhc--------------
Confidence            2222222222  47889999997666789999999999999 599999999999988775444321              


Q ss_pred             HHHhcCcccCCcceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCC
Q 018869          223 EKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPG  289 (349)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPG  289 (349)
                               .+..|.. +.........++...+.+.+.++||.|+..+|.|.        ..|+|++
T Consensus       139 ---------~~~~~iv-l~G~TGsGKT~iL~~L~~~~~~vlDlE~~aehrGS--------~fG~~~~  187 (345)
T PRK11784        139 ---------AQFPLVV-LGGNTGSGKTELLQALANAGAQVLDLEGLANHRGS--------SFGRLGG  187 (345)
T ss_pred             ---------ccCceEe-cCCCCcccHHHHHHHHHhcCCeEEECCchhhhccc--------cccCCCC
Confidence                     1122222 23334577888988888778889999999999885        4577776

>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily

Probab=99.81  E-value=1.1e-19  Score=145.11  Aligned_cols=102  Identities=21%  Similarity=0.243  Sum_probs=80.2

Q ss_pred             ccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 018869           78 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (349)
Q Consensus        78 Is~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~  155 (349)
                      ||++||++++.++  +++|||+|         +..+|..||||||+|+|+..+...... ...+|..+.|..       .
T Consensus         1 is~~~l~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~-~~~~~~~~~~~~-------~   63 (105)
T cd01525           1 ISVYDVIRLLDNSPAKLAAVDIR---------SSPDFRRGHIEGSINIPFSSVFLKEGE-LEQLPTVPRLEN-------Y   63 (105)
T ss_pred             CCHHHHHHHHhCCCCCeEEEECC---------CHHHHhCCccCCCEeCCHHHhcccccc-cccccchHHHHh-------h
Confidence            6899999999763  68999999         778999999999999999765422111 123444344433       2


Q ss_pred             CCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       156 ~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      .+++||+||..|. ++.++++.|+.+||++|++|+||+.+|+
T Consensus        64 ~~~~vv~~c~~g~-~s~~~a~~L~~~G~~~v~~l~GG~~a~~  104 (105)
T cd01525          64 KGKIIVIVSHSHK-HAALFAAFLVKCGVPRVCILDGGINALK  104 (105)
T ss_pred             cCCeEEEEeCCCc-cHHHHHHHHHHcCCCCEEEEeCcHHHhc
Confidence            3688999998776 7889999999999999999999999996

Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.

>PRK00162 glpE thiosulfate sulfurtransferase; Validated

Probab=99.80  E-value=4.2e-19  Score=142.84  Aligned_cols=103  Identities=23%  Similarity=0.323  Sum_probs=88.5

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      .+.+++++|.+.+++.+.+|||+|         +..+|..||||||+|+|+.                 .|.+.+..+  
T Consensus         4 ~~~is~~el~~~l~~~~~~ivDvR---------~~~e~~~ghi~gA~~ip~~-----------------~l~~~~~~~--   55 (108)
T PRK00162          4 FECINVEQAHQKLQEGGAVLVDIR---------DPQSFAMGHAPGAFHLTND-----------------SLGAFMRQA--   55 (108)
T ss_pred             ccccCHHHHHHHHHcCCCEEEEcC---------CHHHHhcCCCCCCeECCHH-----------------HHHHHHHhc--
Confidence            456999999999876678999999         7899999999999999874                 455555553  


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccC
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  206 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~  206 (349)
                      ++++++||||..|. ++..++..|+..||+||++|+||+.+|...++|++..
T Consensus        56 ~~~~~ivv~c~~g~-~s~~a~~~L~~~G~~~v~~l~GG~~~w~~~~~~~~~~  106 (108)
T PRK00162         56 DFDTPVMVMCYHGN-SSQGAAQYLLQQGFDVVYSIDGGFEAWRRTFPAEVAS  106 (108)
T ss_pred             CCCCCEEEEeCCCC-CHHHHHHHHHHCCchheEEecCCHHHHHhcCCCccCC
Confidence            57889999998776 6888888999999999999999999999999998764

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.79  E-value=5.3e-19  Score=142.47  Aligned_cols=115  Identities=18%  Similarity=0.254  Sum_probs=99.3

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ....++.++++++++.++.++||||         .++||..||||.+||||+.....     ..+++ ..+|.+-++...
T Consensus        21 ~~~sv~~~qvk~L~~~~~~~llDVR---------epeEfk~gh~~~siNiPy~~~~~-----~~~l~-~~eF~kqvg~~k   85 (136)
T KOG1530|consen   21 NPQSVSVEQVKNLLQHPDVVLLDVR---------EPEEFKQGHIPASINIPYMSRPG-----AGALK-NPEFLKQVGSSK   85 (136)
T ss_pred             CcEEEEHHHHHHHhcCCCEEEEeec---------CHHHhhccCCcceEecccccccc-----ccccC-CHHHHHHhcccC
Confidence            4567999999999998889999999         78999999999999999964322     22333 457899999988


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcc
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE  204 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~  204 (349)
                      ...++.|||||.+|. ++..|...|..+||+||.+|.|||.+|.+.++|..
T Consensus        86 p~~d~eiIf~C~SG~-Rs~~A~~~l~s~Gyknv~ny~Gs~~~W~~k~~~~~  135 (136)
T KOG1530|consen   86 PPHDKEIIFGCASGV-RSLKATKILVSAGYKNVGNYPGSYLAWVDKGGPKK  135 (136)
T ss_pred             CCCCCcEEEEeccCc-chhHHHHHHHHcCcccccccCccHHHHHHccCCCC
Confidence            888999999999887 78899999999999999999999999999888753

>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily

Probab=99.79  E-value=5.5e-19  Score=139.75  Aligned_cols=97  Identities=22%  Similarity=0.342  Sum_probs=82.8

Q ss_pred             cccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 018869           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (349)
Q Consensus        77 lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~  156 (349)
                      .|++++|.++++++ .+|||+|         +.++|..||||||+|+|+..+....                   ..+++
T Consensus         3 ~i~~~el~~~~~~~-~~liDvR---------~~~e~~~~hi~ga~~ip~~~~~~~~-------------------~~~~~   53 (99)
T cd01527           3 TISPNDACELLAQG-AVLVDIR---------EPDEYLRERIPGARLVPLSQLESEG-------------------LPLVG   53 (99)
T ss_pred             ccCHHHHHHHHHCC-CEEEECC---------CHHHHHhCcCCCCEECChhHhcccc-------------------cCCCC
Confidence            48999999988775 8899999         7899999999999999987653210                   12467


Q ss_pred             CCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCc
Q 018869          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (349)
Q Consensus       157 ~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv  203 (349)
                      +++||+||..|. ++..+++.|+.+|+++|++|+||+.+|...|+|+
T Consensus        54 ~~~iv~~c~~g~-~s~~~~~~L~~~g~~~v~~l~gG~~~W~~~~~~~   99 (99)
T cd01527          54 ANAIIFHCRSGM-RTQQNAERLAAISAGEAYVLEGGLDAWKAAGLPV   99 (99)
T ss_pred             CCcEEEEeCCCc-hHHHHHHHHHHcCCccEEEeeCCHHHHHHCcCCC
Confidence            889999998765 7889999999999999999999999999998874

This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.

>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional

Probab=99.79  E-value=5.8e-19  Score=180.82  Aligned_cols=121  Identities=22%  Similarity=0.375  Sum_probs=104.0

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhh--------hcCCCCCceecCcccccccCCCCCCCCCCHHHH
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY--------QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF  145 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y--------~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~  145 (349)
                      ...+++.+|+++++++++++|||+|         +.++|        ..||||||+|+|+..+.+..    +.+++++++
T Consensus       145 ~~~~v~~e~v~~~l~~~~~~iIDaR---------~~~ef~G~~~~~~r~GHIPGAvnip~~~~~~~~----~~lk~~~el  211 (610)
T PRK09629        145 DEPTATREYLQSRLGAADLAIWDAR---------APTEYSGEKVVAAKGGHIPGAVNFEWTAGMDKA----RNLRIRQDM  211 (610)
T ss_pred             CcccccHHHHHHhhCCCCcEEEECC---------CccccCCcccccccCCCCCCCeecCHHHhcCCC----CCCCCHHHH
Confidence            4568999999999988788999999         45566        47999999999997654432    357888999


Q ss_pred             HHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhC-CCCcccCCC
Q 018869          146 AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS-GYDVESSAS  208 (349)
Q Consensus       146 ~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~-G~pv~~~~~  208 (349)
                      ++++..+|++++++||+||+.|. +|+++||+|+.+|++||++|||||.+|... ++|+++...
T Consensus       212 ~~~~~~~Gi~~~~~VVvYC~sG~-rAa~~~~~L~~lG~~~V~~YdGsw~eW~~~~~lPv~~~~~  274 (610)
T PRK09629        212 PEILRDLGITPDKEVITHCQTHH-RSGFTYLVAKALGYPRVKAYAGSWGEWGNHPDTPVEVPTV  274 (610)
T ss_pred             HHHHHHcCCCCCCCEEEECCCCh-HHHHHHHHHHHcCCCCcEEeCCCHHHHhCCCCCccccCCC
Confidence            99999999999999999998765 899999999999999999999999999874 789887653

>smart00450 RHOD Rhodanese Homology Domain

Probab=99.79  E-value=7.3e-19  Score=137.47  Aligned_cols=99  Identities=32%  Similarity=0.612  Sum_probs=83.0

Q ss_pred             CCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCCc
Q 018869           89 EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGI  168 (349)
Q Consensus        89 ~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVvy~~~g~  168 (349)
                      +++++|||+|         +..+|..||||||+|+|+..+......    .. ...+++.+...++.++++|||||..| 
T Consensus         2 ~~~~~ivDvR---------~~~e~~~~hi~ga~~i~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~iv~~c~~g-   66 (100)
T smart00450        2 DEKVVLLDVR---------SPEEYEGGHIPGAVNIPLSELLDRRGE----LD-ILEFEELLKRLGLDKDKPVVVYCRSG-   66 (100)
T ss_pred             CCCEEEEECC---------CHHHhccCCCCCceeCCHHHhccCCCC----cC-HHHHHHHHHHcCCCCCCeEEEEeCCC-
Confidence            3468999999         789999999999999999876543221    11 12778888889999999999999655 


Q ss_pred             chHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCC
Q 018869          169 FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  202 (349)
Q Consensus       169 ~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~p  202 (349)
                      .++.++++.|+.+|+++|++|+||+.+|...|.|
T Consensus        67 ~~a~~~~~~l~~~G~~~v~~l~GG~~~w~~~~~~  100 (100)
T smart00450       67 NRSAKAAWLLRELGFKNVYLLDGGYKEWSAAGPP  100 (100)
T ss_pred             cHHHHHHHHHHHcCCCceEEecCCHHHHHhcCCC
Confidence            4899999999999999999999999999988754

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.

>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional

Probab=99.78  E-value=6.3e-19  Score=165.44  Aligned_cols=118  Identities=24%  Similarity=0.346  Sum_probs=99.8

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhh-----------hcCCCCCceecCcccccccCCCCCCCCCCH
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-----------QVAHIPGALFFDVDGVADRTTNLPHMLPSE  142 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y-----------~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~  142 (349)
                      +..+++.+++...+++++.+|||+|         +.++|           ..||||||+|+|+..+.+.     ..+.++
T Consensus       151 ~~~~~~~~~v~~~~~~~~~~llD~R---------~~~e~~G~~~~~~~~~~~GhIpgA~~i~~~~~~~~-----~~~~~~  216 (281)
T PRK11493        151 PEAVVRLTDVLLASHEKTAQIVDAR---------PAARFNAEVDEPRPGLRRGHIPGALNVPWTELVRE-----GELKTT  216 (281)
T ss_pred             ccceecHHHHHHhhcCCCcEEEeCC---------CccceeeeccCCCCCcccccCCCcCCCCHHHhcCC-----CCcCCH
Confidence            3457777888877776678999999         55555           3799999999999876532     246678


Q ss_pred             HHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh-CCCCcccC
Q 018869          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESS  206 (349)
Q Consensus       143 ~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~-~G~pv~~~  206 (349)
                      +++++.+...|++++++||+||..|. +|+.+++.|+.+||+||++|+|||.+|.. .++|++++
T Consensus       217 ~~l~~~~~~~g~~~~~~ii~yC~~G~-~A~~~~~~l~~~G~~~v~~y~Gs~~eW~~~~~~P~~~~  280 (281)
T PRK11493        217 DELDAIFFGRGVSFDRPIIASCGSGV-TAAVVVLALATLDVPNVKLYDGAWSEWGARADLPVEPA  280 (281)
T ss_pred             HHHHHHHHhcCCCCCCCEEEECCcHH-HHHHHHHHHHHcCCCCceeeCCCHHHHccCCCCCcCCC
Confidence            89999999999999999999998765 89999999999999999999999999987 69999864

>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain

Probab=99.78  E-value=5.3e-19  Score=140.45  Aligned_cols=102  Identities=20%  Similarity=0.293  Sum_probs=79.8

Q ss_pred             ccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhh-hcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 018869           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (349)
Q Consensus        78 Is~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y-~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~  156 (349)
                      |+++++.+++++++.+|||+|         +..+| ..||||||+|+|+..+.......           ..+...++++
T Consensus         1 is~~el~~~~~~~~~~iiDvR---------~~~~~~~~ghIpga~~ip~~~~~~~~~~~-----------~~~~~~~~~~   60 (103)
T cd01447           1 LSPEDARALLGSPGVLLVDVR---------DPRELERTGMIPGAFHAPRGMLEFWADPD-----------SPYHKPAFAE   60 (103)
T ss_pred             CCHHHHHHHHhCCCeEEEECC---------CHHHHHhcCCCCCcEEcccchhhhhcCcc-----------ccccccCCCC
Confidence            578999999887778999999         66677 67999999999986543211000           0111235788


Q ss_pred             CCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCC
Q 018869          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (349)
Q Consensus       157 ~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G  200 (349)
                      +++|||||..|. ++.+++++|+.+|+++|++|+||+.+|..+|
T Consensus        61 ~~~ivv~c~~g~-~s~~~~~~l~~~G~~~v~~l~Gg~~~w~~~g  103 (103)
T cd01447          61 DKPFVFYCASGW-RSALAGKTLQDMGLKPVYNIEGGFKDWKEAG  103 (103)
T ss_pred             CCeEEEEcCCCC-cHHHHHHHHHHcChHHhEeecCcHHHHhhcC
Confidence            999999998765 7899999999999999999999999998654

This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.

>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3

Probab=99.78  E-value=8.1e-19  Score=137.87  Aligned_cols=93  Identities=22%  Similarity=0.283  Sum_probs=74.2

Q ss_pred             ccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 018869           78 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (349)
Q Consensus        78 Is~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~  155 (349)
                      ||+++|++++.+.  +++|||+|         +..+|..||||||+|+|+..+..                 ....+...
T Consensus         1 is~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghipga~~ip~~~l~~-----------------~~~~~~~~   54 (95)
T cd01534           1 IGAAELARWAAEGDRTVYRFDVR---------TPEEYEAGHLPGFRHTPGGQLVQ-----------------ETDHFAPV   54 (95)
T ss_pred             CCHHHHHHHHHcCCCCeEEEECC---------CHHHHHhCCCCCcEeCCHHHHHH-----------------HHHHhccc
Confidence            6788999988654  57899999         78999999999999999865422                 11111112


Q ss_pred             CCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       156 ~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      ++++||+||..|. ++..+++.|+.+||+ |++|+||+.+|.+
T Consensus        55 ~~~~iv~~c~~G~-rs~~aa~~L~~~G~~-v~~l~GG~~~W~~   95 (95)
T cd01534          55 RGARIVLADDDGV-RADMTASWLAQMGWE-VYVLEGGLAAALA   95 (95)
T ss_pred             CCCeEEEECCCCC-hHHHHHHHHHHcCCE-EEEecCcHHHhcC
Confidence            4688999998876 678888889999998 9999999999963

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.

>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily

Probab=99.78  E-value=1.1e-18  Score=140.97  Aligned_cols=100  Identities=23%  Similarity=0.359  Sum_probs=83.2

Q ss_pred             CcccHHHHHHhcCC--CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           76 PVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        76 ~lIs~~~L~~~l~~--~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ..|++++|.+++.+  ++.+|||+|         +..+|..||||||+|+|...+..                ..  ..+
T Consensus         8 ~~~s~~el~~~l~~~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~l~~----------------~~--~~~   60 (110)
T cd01521           8 FETDCWDVAIALKNGKPDFVLVDVR---------SAEAYARGHVPGAINLPHREICE----------------NA--TAK   60 (110)
T ss_pred             eecCHHHHHHHHHcCCCCEEEEECC---------CHHHHhcCCCCCCEeCCHHHhhh----------------Hh--hhc
Confidence            45899999998865  358999999         77899999999999999865321                11  135


Q ss_pred             CCCCCcEEEECCCCc-chHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCc
Q 018869          154 LENKDGLVVYDGKGI-FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (349)
Q Consensus       154 i~~~~~VVvy~~~g~-~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv  203 (349)
                      ++++++|||||..|. .++.++++.|+.+||+ |++|+||+.+|...|+|+
T Consensus        61 i~~~~~vvvyc~~g~~~~s~~~a~~l~~~G~~-v~~l~GG~~~W~~~g~~~  110 (110)
T cd01521          61 LDKEKLFVVYCDGPGCNGATKAALKLAELGFP-VKEMIGGLDWWKREGYAT  110 (110)
T ss_pred             CCCCCeEEEEECCCCCchHHHHHHHHHHcCCe-EEEecCCHHHHHHCCCCC
Confidence            788999999998763 4799999999999995 999999999999999875

This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.

>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain

Probab=99.78  E-value=1.4e-18  Score=141.64  Aligned_cols=103  Identities=48%  Similarity=0.834  Sum_probs=90.1

Q ss_pred             cCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 018869          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (349)
Q Consensus       246 i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~  325 (349)
                      ++.+++.+.+++++.+|||+|+..||.|....+......||||||+|+|+.++....+.+.+++++++.+...+++++++
T Consensus         1 ~s~~~l~~~l~~~~~~iiDvR~~~e~~~~~~~~~~~~~~ghIpgA~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (118)
T cd01449           1 VTAEEVLANLDSGDVQLVDARSPERFRGEVPEPRPGLRSGHIPGAVNIPWTSLLDEDGTFKSPEELRALFAALGITPDKP   80 (118)
T ss_pred             CCHHHHHHhcCCCCcEEEeCCCHHHcCCcCCCCCCCCcCCcCCCCcccChHHhcCCCCCcCCHHHHHHHHHHcCCCCCCC
Confidence            35678888887666899999999999886555444456699999999999988876677889999999999999999999


Q ss_pred             EEEEcCChHHHHHHHHHHHhCcC
Q 018869          326 VVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       326 vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ||+||++|.+|+.+++.|+.+||
T Consensus        81 iv~yc~~g~~s~~~~~~l~~~G~  103 (118)
T cd01449          81 VIVYCGSGVTACVLLLALELLGY  103 (118)
T ss_pred             EEEECCcHHHHHHHHHHHHHcCC
Confidence            99999999999999999999998

TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.

>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily

Probab=99.78  E-value=9.6e-19  Score=143.94  Aligned_cols=108  Identities=18%  Similarity=0.246  Sum_probs=88.0

Q ss_pred             CCCcccHHHHHHhcCC-CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHH-HHHH
Q 018869           74 KEPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA-AVSA  151 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~-~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~-~~~~  151 (349)
                      ....|+++++.+++.+ .+++|||+|         +..+|..||||||+|+|+..+.+...          .+.. ++..
T Consensus         6 ~~~~is~~el~~~~~~~~~~~ivDvR---------~~~e~~~~hIpgai~ip~~~~~~~~~----------~~~~~~~~~   66 (122)
T cd01526           6 PEERVSVKDYKNILQAGKKHVLLDVR---------PKVHFEICRLPEAINIPLSELLSKAA----------ELKSLQELP   66 (122)
T ss_pred             cccccCHHHHHHHHhCCCCeEEEEcC---------CHHHhhcccCCCCeEccHHHHhhhhh----------hhhhhhhcc
Confidence            4567999999998876 568899999         88999999999999999987654211          1111 3445


Q ss_pred             cCCCCCCcEEEECCCCcchHHHHHHHHHHcCC-CceeEeCCCHHHHHhCCC
Q 018869          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGH-DRVWVLDGGLPRWRASGY  201 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~-~~V~~L~GG~~~W~~~G~  201 (349)
                      .+++++++||+||..|. ++..++..|+.+|| ++|++|+||+.+|..+..
T Consensus        67 ~~~~~~~~ivv~C~~G~-rs~~aa~~L~~~G~~~~v~~l~GG~~~W~~~~~  116 (122)
T cd01526          67 LDNDKDSPIYVVCRRGN-DSQTAVRKLKELGLERFVRDIIGGLKAWADKVD  116 (122)
T ss_pred             cccCCCCcEEEECCCCC-cHHHHHHHHHHcCCccceeeecchHHHHHHHhC
Confidence            67789999999998776 78899999999999 699999999999987644

This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.

>PLN02160 thiosulfate sulfurtransferase

Probab=99.77  E-value=2.8e-18  Score=143.85  Aligned_cols=115  Identities=17%  Similarity=0.173  Sum_probs=90.6

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCc--eecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGA--LFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGA--i~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      .+.|+++++.+.+++ +.+|||||         ++.+|..||||||  +|+|+..+...     ..+.+.+...++ .. 
T Consensus        14 ~~~i~~~e~~~~~~~-~~~lIDVR---------~~~E~~~ghIpgA~~iniP~~~~~~~-----~~l~~~~~~~~~-~~-   76 (136)
T PLN02160         14 VVSVDVSQAKTLLQS-GHQYLDVR---------TQDEFRRGHCEAAKIVNIPYMLNTPQ-----GRVKNQEFLEQV-SS-   76 (136)
T ss_pred             eeEeCHHHHHHHHhC-CCEEEECC---------CHHHHhcCCCCCcceecccchhcCcc-----cccCCHHHHHHH-Hh-
Confidence            456999999998875 46899999         8899999999999  89997543211     123333322323 22 


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                      .++++++||+||..|. +|..++..|...||++|++|+|||.+|.+.|+|+.+..
T Consensus        77 ~~~~~~~IivyC~sG~-RS~~Aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  130 (136)
T PLN02160         77 LLNPADDILVGCQSGA-RSLKATTELVAAGYKKVRNKGGGYLAWVDHSFPINQEE  130 (136)
T ss_pred             ccCCCCcEEEECCCcH-HHHHHHHHHHHcCCCCeeecCCcHHHHhhCCCCccccc
Confidence            2477889999998776 89999999999999999999999999999999998865

>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2

Probab=99.77  E-value=2.5e-18  Score=136.60  Aligned_cols=94  Identities=22%  Similarity=0.354  Sum_probs=77.7

Q ss_pred             ccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC-
Q 018869           78 VSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL-  154 (349)
Q Consensus        78 Is~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi-  154 (349)
                      |++++|.++++.+  +.+|||+|         +.++|..+|||||+|+|+..+.                 +++..++. 
T Consensus         2 i~~~~l~~~~~~~~~~~~iiDvR---------~~~e~~~~hI~ga~~ip~~~~~-----------------~~~~~~~~~   55 (101)
T cd01528           2 ISVAELAEWLADEREEPVLIDVR---------EPEELEIAFLPGFLHLPMSEIP-----------------ERSKELDSD   55 (101)
T ss_pred             CCHHHHHHHHhcCCCCCEEEECC---------CHHHHhcCcCCCCEecCHHHHH-----------------HHHHHhccc
Confidence            7899999998764  58899999         7899999999999999986542                 22222221 


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      +++++||+||..|. +|+++++.|..+||++|++|+||+.+|..
T Consensus        56 ~~~~~vv~~c~~g~-rs~~~~~~l~~~G~~~v~~l~GG~~~w~~   98 (101)
T cd01528          56 NPDKDIVVLCHHGG-RSMQVAQWLLRQGFENVYNLQGGIDAWSL   98 (101)
T ss_pred             CCCCeEEEEeCCCc-hHHHHHHHHHHcCCccEEEecCCHHHHhh
Confidence            56889999998765 78899999999999999999999999974

Subgroup 2 includes uncharacterized putative rhodanese-related domains.

>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family

Probab=99.77  E-value=1.4e-18  Score=139.72  Aligned_cols=105  Identities=26%  Similarity=0.527  Sum_probs=81.2

Q ss_pred             cHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC--CCC
Q 018869           79 SVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG--LEN  156 (349)
Q Consensus        79 s~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g--i~~  156 (349)
                      |++||++++++++++|||+|         +..+|..||||||+|+|+..+.     ........+.+...+...+  +++
T Consensus         1 s~~el~~~l~~~~~~liD~R---------~~~~~~~~hI~ga~~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~   66 (113)
T PF00581_consen    1 SPEELKEMLENESVLLIDVR---------SPEEYERGHIPGAVNIPFPSLD-----PDEPSLSEDKLDEFLKELGKKIDK   66 (113)
T ss_dssp             -HHHHHHHHTTTTEEEEEES---------SHHHHHHSBETTEEEEEGGGGS-----SSSSBCHHHHHHHHHHHHTHGSTT
T ss_pred             CHHHHHhhhhCCCeEEEEeC---------CHHHHHcCCCCCCccccccccc-----cccccccccccccccccccccccc
Confidence            68999999977789999999         8999999999999999997661     1223344556665555554  488


Q ss_pred             CCcEEEECCCCcchHHHH-----HHHHHHcCCCceeEeCCCHHHHHh
Q 018869          157 KDGLVVYDGKGIFSAARV-----WWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       157 ~~~VVvy~~~g~~~a~r~-----~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      +++|||||..|. ++..+     +|+|+.+|+++|++|+|||.+|.+
T Consensus        67 ~~~iv~yc~~~~-~~~~~~~~~~~~~l~~~g~~~v~~l~GG~~~w~~  112 (113)
T PF00581_consen   67 DKDIVFYCSSGW-RSGSAAAARVAWILKKLGFKNVYILDGGFEAWKA  112 (113)
T ss_dssp             TSEEEEEESSSC-HHHHHHHHHHHHHHHHTTTSSEEEETTHHHHHHH
T ss_pred             cccceeeeeccc-ccchhHHHHHHHHHHHcCCCCEEEecChHHHHhc
Confidence            899999996543 34443     445999999999999999999986

; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....

>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.76  E-value=4.3e-18  Score=157.97  Aligned_cols=121  Identities=23%  Similarity=0.438  Sum_probs=106.3

Q ss_pred             CCCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhc----------CCCCCceecCcccccccCCCCCCCCCCH
Q 018869           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------AHIPGALFFDVDGVADRTTNLPHMLPSE  142 (349)
Q Consensus        73 ~~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~----------GHIPGAi~ip~~~l~~~~~~~~~~lp~~  142 (349)
                      +....++.+.++..++.+..+|||+|         ++++|..          ||||||+|+|+..+.+.    ...+.++
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~liDaR---------~~~rf~G~~~ep~~~~~GHIPGAiNipw~~~~~~----~~~~~~~  219 (285)
T COG2897         153 NVKAVVDATLVADALEVPAVLLIDAR---------SPERFRGKEPEPRDGKAGHIPGAINIPWTDLVDD----GGLFKSP  219 (285)
T ss_pred             CccccCCHHHHHHHhcCCCeEEEecC---------CHHHhCCCCCCCCCCCCCCCCCCcCcCHHHHhcC----CCccCcH
Confidence            34568898999999988888999999         7788887          99999999999987763    3578889


Q ss_pred             HHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhC-CCCcccCC
Q 018869          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS-GYDVESSA  207 (349)
Q Consensus       143 ~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~-G~pv~~~~  207 (349)
                      ++.+.++...||+++++||+||+.|. +|+..++.|+.+|+.++++|+|+|.+|... +.||+++.
T Consensus       220 ~~~~~l~~~~gi~~~~~vI~yCgsG~-~As~~~~al~~lg~~~~~lYdGSWsEWg~~~~~PV~~g~  284 (285)
T COG2897         220 EEIARLYADAGIDPDKEVIVYCGSGV-RASVTWLALAELGGPNNRLYDGSWSEWGSDPDRPVETGE  284 (285)
T ss_pred             HHHHHHHHhcCCCCCCCEEEEcCCch-HHHHHHHHHHHhCCCCcccccChHHHhhcCCCCccccCC
Confidence            99999999999999999999999887 799999999999999889999999999865 45887764

>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily

Probab=99.75  E-value=4.4e-18  Score=133.91  Aligned_cols=93  Identities=25%  Similarity=0.374  Sum_probs=73.6

Q ss_pred             HHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCc
Q 018869           80 VDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG  159 (349)
Q Consensus        80 ~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~  159 (349)
                      ++||.+.  +++++|||+|         +..+|..||||||+|+|+..+.          ...+.++. ++.  ++++++
T Consensus         3 ~~~l~~~--~~~~~iiDvR---------~~~~~~~~hIpgA~~ip~~~~~----------~~~~~~~~-~~~--~~~~~~   58 (96)
T cd01529           3 ADWLGEH--EPGTALLDVR---------AEDEYAAGHLPGKRSIPGAALV----------LRSQELQA-LEA--PGRATR   58 (96)
T ss_pred             hHHHhcC--CCCeEEEeCC---------CHHHHcCCCCCCcEeCCHHHhc----------CCHHHHHH-hhc--CCCCCC
Confidence            4566653  4568999999         7789999999999999986542          22344443 332  468899


Q ss_pred             EEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          160 LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       160 VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      ||+||..|. ++.++++.|+.+||+||++|+||+.+|.
T Consensus        59 ivv~c~~g~-~s~~~~~~l~~~G~~~v~~l~GG~~~W~   95 (96)
T cd01529          59 YVLTCDGSL-LARFAAQELLALGGKPVALLDGGTSAWV   95 (96)
T ss_pred             EEEEeCChH-HHHHHHHHHHHcCCCCEEEeCCCHHHhc
Confidence            999998665 6788888899999999999999999996

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.

>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily

Probab=99.75  E-value=4.7e-18  Score=139.71  Aligned_cols=99  Identities=17%  Similarity=0.207  Sum_probs=78.5

Q ss_pred             cccHHHHHHhcCC------CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcc-cccccCCCCCCCCCCHHHHHHHH
Q 018869           77 VVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD-GVADRTTNLPHMLPSEEAFAAAV  149 (349)
Q Consensus        77 lIs~~~L~~~l~~------~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~-~l~~~~~~~~~~lp~~~~~~~~~  149 (349)
                      .||++++.+++.+      ++++|||||         +..+|..||||||+|+|+. .+..             .+.+..
T Consensus         3 ~Is~~el~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghI~gA~~ip~~~~l~~-------------~~~~~~   60 (121)
T cd01530           3 RISPETLARLLQGKYDNFFDKYIIIDCR---------FPYEYNGGHIKGAVNLSTKDELEE-------------FFLDKP   60 (121)
T ss_pred             ccCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHhCCcCCCCEeCCcHHHHHH-------------HHHHhh
Confidence            4899999999865      368999999         7889999999999999985 2211             111112


Q ss_pred             HHcCCCCCCcEEEECCCCcchHHHHHHHHHHc------------CCCceeEeCCCHHHHH
Q 018869          150 SALGLENKDGLVVYDGKGIFSAARVWWMFRVF------------GHDRVWVLDGGLPRWR  197 (349)
Q Consensus       150 ~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~------------G~~~V~~L~GG~~~W~  197 (349)
                      ..++++++++|||||..++.+++++++.|+.+            ||.+|++|+||+.+|.
T Consensus        61 ~~~~~~~~~~vv~yC~~sg~rs~~aa~~L~~~~~~~~~~~~~~~g~~~v~~L~GG~~~f~  120 (121)
T cd01530          61 GVASKKKRRVLIFHCEFSSKRGPRMARHLRNLDRELNSNRYPLLYYPEIYILEGGYKNFF  120 (121)
T ss_pred             cccccCCCCEEEEECCCccccHHHHHHHHHHHhhhhccccCCCCCCCeEEEEcChhHhhc
Confidence            23567899999999973444899999999985            9999999999999984

They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).

>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily

Probab=99.75  E-value=9.4e-18  Score=130.47  Aligned_cols=89  Identities=22%  Similarity=0.345  Sum_probs=75.0

Q ss_pred             ccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK  157 (349)
Q Consensus        78 Is~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~  157 (349)
                      ++++++.+++. ++.+|||+|         +.++|..||||||+|+|+..                 |++.++.  ++++
T Consensus         1 ~~~~e~~~~~~-~~~~iiD~R---------~~~~~~~~hipgA~~ip~~~-----------------~~~~~~~--~~~~   51 (90)
T cd01524           1 VQWHELDNYRA-DGVTLIDVR---------TPQEFEKGHIKGAINIPLDE-----------------LRDRLNE--LPKD   51 (90)
T ss_pred             CCHHHHHHHhc-CCCEEEECC---------CHHHHhcCCCCCCEeCCHHH-----------------HHHHHHh--cCCC
Confidence            46889999884 467899999         88999999999999999753                 3444443  4678


Q ss_pred             CcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          158 DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       158 ~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      ++||+||..|. ++..+++.|+.+|+ +|++|+||+.+|+
T Consensus        52 ~~vvl~c~~g~-~a~~~a~~L~~~G~-~v~~l~GG~~~w~   89 (90)
T cd01524          52 KEIIVYCAVGL-RGYIAARILTQNGF-KVKNLDGGYKTYS   89 (90)
T ss_pred             CcEEEEcCCCh-hHHHHHHHHHHCCC-CEEEecCCHHHhc
Confidence            89999998764 78899999999999 8999999999996

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.

>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

Probab=99.74  E-value=9.8e-18  Score=131.46  Aligned_cols=91  Identities=33%  Similarity=0.468  Sum_probs=77.9

Q ss_pred             ccHHHHHHhcCC-CCcEEEEeccCCCCCCCCChhhhhc--CCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           78 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQV--AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        78 Is~~~L~~~l~~-~~~~iIDvR~~~~~~~~~~~~~y~~--GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      |+++++++++++ .+.+|||+|         +..+|..  ||||||+|+|+..                 +.+.+..  +
T Consensus         2 i~~~~~~~~~~~~~~~~ivDvR---------~~~e~~~~~~hi~ga~~ip~~~-----------------~~~~~~~--~   53 (96)
T cd01444           2 ISVDELAELLAAGEAPVLLDVR---------DPASYAALPDHIPGAIHLDEDS-----------------LDDWLGD--L   53 (96)
T ss_pred             cCHHHHHHHHhcCCCcEEEECC---------CHHHHhcccCCCCCCeeCCHHH-----------------HHHHHhh--c
Confidence            688999998876 468999999         7889999  9999999999864                 3344433  5


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      +++++|||||..|. ++.++++.|+.+||++|++|+||+.+|.
T Consensus        54 ~~~~~ivv~c~~g~-~s~~a~~~l~~~G~~~v~~l~gG~~~w~   95 (96)
T cd01444          54 DRDRPVVVYCYHGN-SSAQLAQALREAGFTDVRSLAGGFEAWR   95 (96)
T ss_pred             CCCCCEEEEeCCCC-hHHHHHHHHHHcCCceEEEcCCCHHHhc
Confidence            78899999998554 8999999999999999999999999996

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.74  E-value=4.5e-17  Score=158.88  Aligned_cols=104  Identities=18%  Similarity=0.231  Sum_probs=89.5

Q ss_pred             CcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 018869           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (349)
Q Consensus        76 ~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~  155 (349)
                      +.|+++++++++++ +.+|||+|         +.++|..||||||+|+|+..                 +.+.+..++++
T Consensus         3 ~~is~~el~~~l~~-~~~ivDvR---------~~~e~~~ghIpgAi~ip~~~-----------------l~~~~~~~~~~   55 (376)
T PRK08762          3 REISPAEARARAAQ-GAVLIDVR---------EAHERASGQAEGALRIPRGF-----------------LELRIETHLPD   55 (376)
T ss_pred             ceeCHHHHHHHHhC-CCEEEECC---------CHHHHhCCcCCCCEECCHHH-----------------HHHHHhhhcCC
Confidence            45899999999876 48999999         78999999999999999753                 34445555567


Q ss_pred             CCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       156 ~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                      ++++||+||..|. ++.++++.|+.+||+||++|+||+.+|...|+|++...
T Consensus        56 ~~~~IvvyC~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  106 (376)
T PRK08762         56 RDREIVLICASGT-RSAHAAATLRELGYTRVASVAGGFSAWKDAGLPLERPR  106 (376)
T ss_pred             CCCeEEEEcCCCc-HHHHHHHHHHHcCCCceEeecCcHHHHHhcCCcccccc
Confidence            8999999998765 78999999999999999999999999999999988754

>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain

Probab=99.74  E-value=1e-17  Score=140.88  Aligned_cols=103  Identities=34%  Similarity=0.558  Sum_probs=87.0

Q ss_pred             cCHHHHHHHhh----cCCceEEeccCC--------CcccccCCCCCC-CCCccccCCCcccCcccccCCCCC----CCCH
Q 018869          246 WTLEQVKRNIE----EGTYQLVDARSK--------ARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQT----LLPA  308 (349)
Q Consensus       246 i~~~~v~~~~~----~~~~~lID~R~~--------~ey~G~~~~~~~-~~~~GHIPGA~~ip~~~l~~~~~~----l~~~  308 (349)
                      ++.++|.+.++    +++.+|||+|+.        .+|.|..++|.. +.+.||||||+|+||.++.+.++.    +.+.
T Consensus         1 vs~e~l~~~l~~~~~~~~~~iiD~r~~~~~~~~~~~~y~~~~~~~~~~~~~~GHIPgAv~~~~~~~~~~~~~~~~~~p~~   80 (138)
T cd01445           1 KSTEQLAENLEAGKVGKGFQLLDARAQSPGTREARGEYLETQPEPDAVGLDSGHIPGASFFDFEECLDEAGFEESMEPSE   80 (138)
T ss_pred             CCHHHHHHHhhccccCCCeEEEEccCCCccCcchhhhhcccCCCCCcCCCcCCcCCCCEeeCHHHhhCcCCCCCCCCCCH
Confidence            46789999887    467899999987        899987666532 346699999999999988765543    4567


Q ss_pred             HHHHHHHHHcCCCCCCCEEEEcCC---hHHHHHHHHHHHhCcC
Q 018869          309 DELKKRFEQEGISLEKPVVTACGT---GVTACILALVLFPVFF  348 (349)
Q Consensus       309 ~el~~~~~~~~i~~~~~vivyC~~---G~rA~~~~~~L~~~g~  348 (349)
                      ++|++.|.+.||+++++||+||++   |.+|+.++++|+.+|+
T Consensus        81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~  123 (138)
T cd01445          81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGH  123 (138)
T ss_pred             HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCC
Confidence            899999999999999999999987   8999999999999997

Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=99.73  E-value=2.1e-18  Score=163.61  Aligned_cols=179  Identities=13%  Similarity=0.081  Sum_probs=123.3

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ..++-+++++++.+.. ...++|+|         +...|..+||||++++|...+              +.+..++... 
T Consensus        12 f~~i~~~~~~~~~l~~-~~~~~d~r---------g~i~~a~egIngtis~~~~~~--------------~~~~~~l~~~-   66 (314)
T PRK00142         12 YTPIEDPEAFRDEHLA-LCKSLGLK---------GRILVAEEGINGTVSGTIEQT--------------EAYMAWLKAD-   66 (314)
T ss_pred             cccCCCHHHHHHHHHH-HHHHcCCe---------eEEEEcCCCceEEEEecHHHH--------------HHHHHHHhhC-
Confidence            4456778888887764 36789999         788999999999999997432              2334444331 


Q ss_pred             CCCCCcEE-EECCCCcchH----HHHHHHHHHcCCC-ceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhc
Q 018869          154 LENKDGLV-VYDGKGIFSA----ARVWWMFRVFGHD-RVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ  227 (349)
Q Consensus       154 i~~~~~VV-vy~~~g~~~a----~r~~~~L~~~G~~-~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~  227 (349)
                       ....+++ +++.......    .++...|..+|++ ++.-+.             ..                      
T Consensus        67 -~~~~~i~l~~~~~~~~~f~~l~~~~~~eLv~~G~d~~v~~~~-------------~~----------------------  110 (314)
T PRK00142         67 -PRFADIRFKISEDDGHAFPRLSVKVRKEIVALGLDDDIDPLE-------------NV----------------------  110 (314)
T ss_pred             -cCCCCceEEeccccCCCcccceeeeeeeeeecCCCCCCCccc-------------cC----------------------
Confidence             1234443 3332111112    4555566666764 332111             01                      


Q ss_pred             CcccCCcceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCC
Q 018869          228 GQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLP  307 (349)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~  307 (349)
                                     ...++.+++.+.+++++.+|||+|++.||           ..||||||+|+|+.++.+.      
T Consensus       111 ---------------~~~is~~el~~~l~~~~~vlIDVR~~~E~-----------~~GhI~GAi~ip~~~~~~~------  158 (314)
T PRK00142        111 ---------------GTYLKPKEVNELLDDPDVVFIDMRNDYEY-----------EIGHFENAIEPDIETFREF------  158 (314)
T ss_pred             ---------------CcccCHHHHHHHhcCCCeEEEECCCHHHH-----------hcCcCCCCEeCCHHHhhhh------
Confidence                           12467788888888888999999999999           6799999999999876421      


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          308 ADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       308 ~~el~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++.+.+   ..++.++++||+||.+|.|+..++.+|...||
T Consensus       159 ~~~l~~---~~~~~kdk~IvvyC~~G~Rs~~aa~~L~~~Gf  196 (314)
T PRK00142        159 PPWVEE---NLDPLKDKKVVMYCTGGIRCEKASAWMKHEGF  196 (314)
T ss_pred             HHHHHH---hcCCCCcCeEEEECCCCcHHHHHHHHHHHcCC
Confidence            223322   23467899999999999999999999999998

>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily

Probab=99.73  E-value=1.6e-17  Score=131.59  Aligned_cols=98  Identities=23%  Similarity=0.158  Sum_probs=77.4

Q ss_pred             ccHHHHHHhcCC-CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 018869           78 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (349)
Q Consensus        78 Is~~~L~~~l~~-~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~  156 (349)
                      |++++|++++++ .+.+|||||         +..+|+.||||||+|+|+..+....      +   +...+.+..  +++
T Consensus         1 is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghi~ga~~ip~~~~~~~~------~---~~~~~~~~~--~~~   60 (100)
T cd01523           1 LDPEDLYARLLAGQPLFILDVR---------NESDYERWKIDGENNTPYFDPYFDF------L---EIEEDILDQ--LPD   60 (100)
T ss_pred             CCHHHHHHHHHcCCCcEEEEeC---------CHHHHhhcccCCCcccccccchHHH------H---HhhHHHHhh--CCC
Confidence            578899998876 468999999         7899999999999999987642210      0   001223333  467


Q ss_pred             CCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       157 ~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      +++|||||..|. ++..++..|+..||+ |+.|.||+.+|.
T Consensus        61 ~~~ivv~C~~G~-rs~~aa~~L~~~G~~-~~~l~GG~~~W~   99 (100)
T cd01523          61 DQEVTVICAKEG-SSQFVAELLAERGYD-VDYLAGGMKAWS   99 (100)
T ss_pred             CCeEEEEcCCCC-cHHHHHHHHHHcCce-eEEeCCcHHhhc
Confidence            899999998776 789999999999998 999999999995

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.

>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4

Probab=99.73  E-value=1.9e-17  Score=140.25  Aligned_cols=96  Identities=30%  Similarity=0.385  Sum_probs=80.3

Q ss_pred             HHHhcCC-CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEE
Q 018869           83 LHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLV  161 (349)
Q Consensus        83 L~~~l~~-~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VV  161 (349)
                      |.+++.. .+++|||+|         +..+|..||||||+|+|..                 +|.+.+..++  ++++||
T Consensus         2 l~~~l~~~~~~~ivDvR---------~~~e~~~gHIpgAi~~~~~-----------------~l~~~l~~l~--~~~~vV   53 (145)
T cd01535           2 LAAWLGEGGQTAVVDVT---------ASANYVKRHIPGAWWVLRA-----------------QLAQALEKLP--AAERYV   53 (145)
T ss_pred             hHHHHhCCCCeEEEECC---------CHHHHHcCCCCCceeCCHH-----------------HHHHHHHhcC--CCCCEE
Confidence            3444533 358999999         7889999999999999753                 5666677654  578899


Q ss_pred             EECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          162 VYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       162 vy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                      |||..+. .|..+++.|+..|+++|++|+||+.+|.+.|+|++++.
T Consensus        54 v~c~~g~-~a~~aa~~L~~~G~~~v~~L~GG~~aW~~~g~pl~~~~   98 (145)
T cd01535          54 LTCGSSL-LARFAAADLAALTVKPVFVLEGGTAAWIAAGLPVESGE   98 (145)
T ss_pred             EEeCCCh-HHHHHHHHHHHcCCcCeEEecCcHHHHHHCCCCcccCC
Confidence            9998764 78999999999999999999999999999999999864

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.

>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1

Probab=99.72  E-value=2.1e-17  Score=135.06  Aligned_cols=103  Identities=15%  Similarity=0.100  Sum_probs=83.8

Q ss_pred             ccHHHHHHhcCC-CCcEEEEeccCCCCCCCCChhhhh-cCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 018869           78 VSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQ-VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (349)
Q Consensus        78 Is~~~L~~~l~~-~~~~iIDvR~~~~~~~~~~~~~y~-~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~  155 (349)
                      ||++++++++++ ++.+|||+|         +..+|+ .||||||+|+|+..+...       .++ ..|...+..+. +
T Consensus         1 is~~el~~~l~~~~~~~vIDvR---------~~~e~~~~ghIpgA~~ip~~~~~~~-------~~~-~~~~~~l~~~~-~   62 (117)
T cd01522           1 LTPAEAWALLQADPQAVLVDVR---------TEAEWKFVGGVPDAVHVAWQVYPDM-------EIN-PNFLAELEEKV-G   62 (117)
T ss_pred             CCHHHHHHHHHhCCCeEEEECC---------CHHHHhcccCCCCceecchhhcccc-------ccC-HHHHHHHHhhC-C
Confidence            688999999877 578999999         789999 999999999999765321       122 24555555543 6


Q ss_pred             CCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhC
Q 018869          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (349)
Q Consensus       156 ~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~  199 (349)
                      ++++||+||..|. ++..+++.|+.+||+||+.|.||+.+|...
T Consensus        63 ~~~~ivv~C~~G~-rs~~aa~~L~~~G~~~v~~l~gG~~~~~~~  105 (117)
T cd01522          63 KDRPVLLLCRSGN-RSIAAAEAAAQAGFTNVYNVLEGFEGDLDA  105 (117)
T ss_pred             CCCeEEEEcCCCc-cHHHHHHHHHHCCCCeEEECcCceecCCCC
Confidence            8899999998764 899999999999999999999999999753

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.

>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily

Probab=99.71  E-value=3.2e-17  Score=133.00  Aligned_cols=100  Identities=22%  Similarity=0.315  Sum_probs=77.2

Q ss_pred             CcccHHHHHHhcCC--CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           76 PVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        76 ~lIs~~~L~~~l~~--~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      +.|++++|++++..  ++++|||+|         +. +|..||||||+|+|+..+..             .+.++....+
T Consensus         2 ~~is~~~l~~~~~~~~~~~~iiDvR---------~~-e~~~~hi~gA~~ip~~~l~~-------------~~~~~~~~~~   58 (113)
T cd01531           2 SYISPAQLKGWIRNGRPPFQVVDVR---------DE-DYAGGHIKGSWHYPSTRFKA-------------QLNQLVQLLS   58 (113)
T ss_pred             CcCCHHHHHHHHHcCCCCEEEEEcC---------Cc-ccCCCcCCCCEecCHHHHhh-------------CHHHHHHHHh
Confidence            46899999999866  457899999         67 99999999999999986532             2344444455


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHH--------cCCCceeEeCCCHHHHHh
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRV--------FGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~--------~G~~~V~~L~GG~~~W~~  198 (349)
                      ++++++|||||..++.++..++..|..        .|+.||++|+||+.+|.+
T Consensus        59 ~~~~~~iv~yC~~~~~r~~~aa~~l~~~~~~~~~~~G~~~v~~l~gG~~~w~~  111 (113)
T cd01531          59 GSKKDTVVFHCALSQVRGPSAARKFLRYLDEEDLETSKFEVYVLHGGFNAWES  111 (113)
T ss_pred             cCCCCeEEEEeecCCcchHHHHHHHHHHHHHhccccCCCeEEEEcChHHHHHh
Confidence            678899999997444456666554432        499999999999999985

Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.

>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1

Probab=99.70  E-value=7.8e-17  Score=125.90  Aligned_cols=87  Identities=23%  Similarity=0.280  Sum_probs=68.5

Q ss_pred             hcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEECC
Q 018869           86 NLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG  165 (349)
Q Consensus        86 ~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVvy~~  165 (349)
                      ++++++++|||+|         +..+|..||||||+|+|+..+...                ....+ .+++++|||||.
T Consensus         5 ~~~~~~~~liDvR---------~~~e~~~~hi~ga~~ip~~~~~~~----------------~~~~~-~~~~~~ivl~c~   58 (92)
T cd01532           5 LLAREEIALIDVR---------EEDPFAQSHPLWAANLPLSRLELD----------------AWVRI-PRRDTPIVVYGE   58 (92)
T ss_pred             hhcCCCeEEEECC---------CHHHHhhCCcccCeeCCHHHHHhh----------------hHhhC-CCCCCeEEEEeC
Confidence            4455678999999         789999999999999998653211                11111 135789999998


Q ss_pred             CCcc-hHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          166 KGIF-SAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       166 ~g~~-~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      .|.. .+.++++.|+..||++|++|+||+.+|.+
T Consensus        59 ~G~~~~s~~aa~~L~~~G~~~v~~l~GG~~~W~~   92 (92)
T cd01532          59 GGGEDLAPRAARRLSELGYTDVALLEGGLQGWRA   92 (92)
T ss_pred             CCCchHHHHHHHHHHHcCccCEEEccCCHHHHcC
Confidence            7753 27899999999999999999999999963

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.

>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily

Probab=99.68  E-value=1.5e-16  Score=129.00  Aligned_cols=98  Identities=20%  Similarity=0.323  Sum_probs=72.8

Q ss_pred             cccHHHHHHhcCCC------CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 018869           77 VVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (349)
Q Consensus        77 lIs~~~L~~~l~~~------~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~  150 (349)
                      .|++++|++++.++      +++|||||         +. +|..||||||+|+|+..+..             .+.+.+.
T Consensus         3 ~is~~el~~~l~~~~~~~~~~~~iiDvR---------~~-ef~~ghipgAi~ip~~~~~~-------------~~~~~~~   59 (113)
T cd01443           3 YISPEELVALLENSDSNAGKDFVVVDLR---------RD-DYEGGHIKGSINLPAQSCYQ-------------TLPQVYA   59 (113)
T ss_pred             ccCHHHHHHHHhCCccccCCcEEEEECC---------ch-hcCCCcccCceecchhHHHH-------------HHHHHHH
Confidence            58999999999764      58899999         67 99999999999999876432             2223333


Q ss_pred             HcCCCCCCcEEEECCCCcchHHHHHHH-HH---HcCC--CceeEeCCCHHHHH
Q 018869          151 ALGLENKDGLVVYDGKGIFSAARVWWM-FR---VFGH--DRVWVLDGGLPRWR  197 (349)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~r~~~~-L~---~~G~--~~V~~L~GG~~~W~  197 (349)
                      .+...+.++||+||..++.++.+++.. ++   ..|+  .++++|+||+.+|.
T Consensus        60 ~~~~~~~~~iv~~C~~~g~rs~~a~~~l~~~l~~~G~~~~~v~~l~GG~~~w~  112 (113)
T cd01443          60 LFSLAGVKLAIFYCGSSQGRGPRAARWFADYLRKVGESLPKSYILTGGIKAWY  112 (113)
T ss_pred             HhhhcCCCEEEEECCCCCcccHHHHHHHHHHHhccCCCCCeEEEECChhhhhc
Confidence            333345678999998755567776633 33   3465  68999999999995

Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).

>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

Probab=99.68  E-value=1.4e-16  Score=122.35  Aligned_cols=88  Identities=32%  Similarity=0.559  Sum_probs=73.0

Q ss_pred             HHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 018869           83 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVV  162 (349)
Q Consensus        83 L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVv  162 (349)
                      +++++..++.+|||+|         +..+|..||||||+|+|+..+...                 ....+++++++|||
T Consensus         2 ~~~~~~~~~~~iiD~R---------~~~~~~~~~i~ga~~~~~~~~~~~-----------------~~~~~~~~~~~vv~   55 (89)
T cd00158           2 LKELLDDEDAVLLDVR---------EPEEYAAGHIPGAINIPLSELEER-----------------AALLELDKDKPIVV   55 (89)
T ss_pred             hHHHhcCCCeEEEECC---------CHHHHhccccCCCEecchHHHhhH-----------------HHhhccCCCCeEEE
Confidence            3455556679999999         788999999999999998753221                 13456789999999


Q ss_pred             ECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          163 YDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       163 y~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      ||..+. ++.++++.|+.+|+++|++|+||+.+|.
T Consensus        56 ~c~~~~-~a~~~~~~l~~~G~~~v~~l~gG~~~w~   89 (89)
T cd00158          56 YCRSGN-RSARAAKLLRKAGGTNVYNLEGGMLAWK   89 (89)
T ss_pred             EeCCCc-hHHHHHHHHHHhCcccEEEecCChhhcC
Confidence            998764 7999999999999999999999999994

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.

>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase

Probab=99.67  E-value=8.3e-17  Score=134.14  Aligned_cols=109  Identities=27%  Similarity=0.388  Sum_probs=81.1

Q ss_pred             cccHHHHHHhcCC--CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCC---C--CCCCCCCHHHHHHHH
Q 018869           77 VVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT---N--LPHMLPSEEAFAAAV  149 (349)
Q Consensus        77 lIs~~~L~~~l~~--~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~---~--~~~~lp~~~~~~~~~  149 (349)
                      +|+++||.++++.  ++++|||+|         +..+|..||||||+|+|+..+.....   .  ...+++..+.++++.
T Consensus         1 ~is~~~l~~~l~~~~~~~~iiDvR---------~~~~~~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   71 (132)
T cd01446           1 TIDCAWLAALLREGGERLLLLDCR---------PFLEYSSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSCPEDRDRLR   71 (132)
T ss_pred             CcCHHHHHHHHhcCCCCEEEEECC---------CHHHHhhCcccCcEecChHHHHHHhhcccchhhhhhcCCHHHHHHHh
Confidence            4899999999975  468999999         78899999999999999986432110   0  012455555544433


Q ss_pred             HHcCCCCCCcEEEECCCCc-----chHHHHHHHHHHcCC-----CceeEeCCCHHHHHh
Q 018869          150 SALGLENKDGLVVYDGKGI-----FSAARVWWMFRVFGH-----DRVWVLDGGLPRWRA  198 (349)
Q Consensus       150 ~~~gi~~~~~VVvy~~~g~-----~~a~r~~~~L~~~G~-----~~V~~L~GG~~~W~~  198 (349)
                      . .   ++++|||||..+.     ..+++++|+++.+|+     .+|++|+||+.+|.+
T Consensus        72 ~-~---~~~~VVvYd~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~L~GG~~~w~~  126 (132)
T cd01446          72 R-G---ESLAVVVYDESSSDRERLREDSTAESVLGKLLRKLQEGCSVYLLKGGFEQFSS  126 (132)
T ss_pred             c-C---CCCeEEEEeCCCcchhhccccchHHHHHHHHHHhcCCCceEEEEcchHHHHHh
Confidence            3 2   6789999998664     346777788777776     689999999999975

This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.

>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily

Probab=99.67  E-value=1.1e-16  Score=127.99  Aligned_cols=89  Identities=25%  Similarity=0.413  Sum_probs=77.5

Q ss_pred             CHHHHHHHhh-cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 018869          247 TLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (349)
Q Consensus       247 ~~~~v~~~~~-~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~  325 (349)
                      +.+++.+.++ .++.+|||+|++.||           ..||||||+|+|+.++.+.  ...+++++++.+...+++++++
T Consensus         2 ~~~~~~~~l~~~~~~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   68 (106)
T cd01519           2 SFEEVKNLPNPHPNKVLIDVREPEEL-----------KTGKIPGAINIPLSSLPDA--LALSEEEFEKKYGFPKPSKDKE   68 (106)
T ss_pred             cHHHHHHhcCCCCCEEEEECCCHHHH-----------hcCcCCCcEEechHHhhhh--hCCCHHHHHHHhcccCCCCCCe
Confidence            4677888877 667899999999999           6799999999999886432  3467888999998888889999


Q ss_pred             EEEEcCChHHHHHHHHHHHhCcC
Q 018869          326 VVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       326 vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ||+||++|.+|..++..|..+||
T Consensus        69 ivv~c~~g~~s~~~~~~l~~~G~   91 (106)
T cd01519          69 LIFYCKAGVRSKAAAELARSLGY   91 (106)
T ss_pred             EEEECCCcHHHHHHHHHHHHcCC
Confidence            99999999999999999999998

This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.

>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain

Probab=99.65  E-value=3.7e-16  Score=128.21  Aligned_cols=99  Identities=21%  Similarity=0.221  Sum_probs=82.0

Q ss_pred             cCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCC----CCCCCCHHHHHHHHHHcCCC
Q 018869          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA----SQTLLPADELKKRFEQEGIS  321 (349)
Q Consensus       246 i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~----~~~l~~~~el~~~~~~~~i~  321 (349)
                      ++.+++.+.+++++.+|||+|++.+|.+    .......||||||+|+|+.++...    .+.+.+.+++++.+...+++
T Consensus         2 i~~~~l~~~l~~~~~~ivDvR~~~~~~~----~~~~~~~ghI~ga~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (122)
T cd01448           2 VSPDWLAEHLDDPDVRILDARWYLPDRD----GRKEYLEGHIPGAVFFDLDEDLDDKSPGPHMLPSPEEFAELLGSLGIS   77 (122)
T ss_pred             cCHHHHHHHhCCCCeEEEEeecCCCCCc----hhhHHhhCCCCCCEEcChhhccccCCCCCCCCCCHHHHHHHHHHcCCC
Confidence            6788999988876788999999944411    001126799999999999887652    45788999999999998999


Q ss_pred             CCCCEEEEcCC-hHHHHHHHHHHHhCcC
Q 018869          322 LEKPVVTACGT-GVTACILALVLFPVFF  348 (349)
Q Consensus       322 ~~~~vivyC~~-G~rA~~~~~~L~~~g~  348 (349)
                      ++++||+||++ |.+|+.++..|+.+||
T Consensus        78 ~~~~vv~~c~~g~~~a~~~~~~l~~~G~  105 (122)
T cd01448          78 NDDTVVVYDDGGGFFAARAWWTLRYFGH  105 (122)
T ss_pred             CCCEEEEECCCCCccHHHHHHHHHHcCC
Confidence            99999999999 5999999999999997

TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.

>PRK00142 putative rhodanese-related sulfurtransferase; Provisional

Probab=99.64  E-value=8.6e-16  Score=145.82  Aligned_cols=103  Identities=18%  Similarity=0.270  Sum_probs=85.1

Q ss_pred             CCCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        73 ~~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      .....|+++++.+++.+++++|||||         +..||..||||||+|+|+..+.+.          ++.+   ...+
T Consensus       109 ~~~~~is~~el~~~l~~~~~vlIDVR---------~~~E~~~GhI~GAi~ip~~~~~~~----------~~~l---~~~~  166 (314)
T PRK00142        109 NVGTYLKPKEVNELLDDPDVVFIDMR---------NDYEYEIGHFENAIEPDIETFREF----------PPWV---EENL  166 (314)
T ss_pred             cCCcccCHHHHHHHhcCCCeEEEECC---------CHHHHhcCcCCCCEeCCHHHhhhh----------HHHH---HHhc
Confidence            34568999999999988889999999         788999999999999999765321          1111   2345


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      ++.++++||+||.+|. ++..++..|+..||++|++|+||+.+|..
T Consensus       167 ~~~kdk~IvvyC~~G~-Rs~~aa~~L~~~Gf~~V~~L~GGi~~w~~  211 (314)
T PRK00142        167 DPLKDKKVVMYCTGGI-RCEKASAWMKHEGFKEVYQLEGGIITYGE  211 (314)
T ss_pred             CCCCcCeEEEECCCCc-HHHHHHHHHHHcCCCcEEEecchHHHHHH
Confidence            6678899999998766 78888888999999999999999999975

>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily

Probab=99.64  E-value=4.5e-16  Score=123.56  Aligned_cols=84  Identities=17%  Similarity=0.188  Sum_probs=68.8

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .++.+++.+.+++++.+|||+|++.||           ..||||||+|+|+.++.+.      .+.+.+.+.   +++++
T Consensus         3 ~is~~~l~~~~~~~~~~iiDvR~~~e~-----------~~ghi~gA~~ip~~~~~~~------~~~~~~~~~---~~~~~   62 (101)
T cd01518           3 YLSPAEWNELLEDPEVVLLDVRNDYEY-----------DIGHFKGAVNPDVDTFREF------PFWLDENLD---LLKGK   62 (101)
T ss_pred             cCCHHHHHHHHcCCCEEEEEcCChhhh-----------hcCEeccccCCCcccHhHh------HHHHHhhhh---hcCCC
Confidence            478889998888777899999999999           6799999999999765321      123333322   47889


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcC
Q 018869          325 PVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +||+||.+|.||..++..|...||
T Consensus        63 ~ivvyC~~G~rs~~a~~~L~~~G~   86 (101)
T cd01518          63 KVLMYCTGGIRCEKASAYLKERGF   86 (101)
T ss_pred             EEEEECCCchhHHHHHHHHHHhCC
Confidence            999999999999999999999998

This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.

>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE

Probab=99.63  E-value=1.1e-15  Score=121.51  Aligned_cols=80  Identities=16%  Similarity=0.201  Sum_probs=68.6

Q ss_pred             CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCCcch
Q 018869           91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFS  170 (349)
Q Consensus        91 ~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVvy~~~g~~~  170 (349)
                      +..+||+|         +.++|..||||||+|+|+.                 ++.+.+..++.+++++|||||..|. +
T Consensus        18 ~~~lIDvR---------~~~ef~~ghIpgAinip~~-----------------~l~~~l~~~~~~~~~~vvlyC~~G~-r   70 (101)
T TIGR02981        18 AEHWIDVR---------IPEQYQQEHIQGAINIPLK-----------------EIKEHIATAVPDKNDTVKLYCNAGR-Q   70 (101)
T ss_pred             CCEEEECC---------CHHHHhcCCCCCCEECCHH-----------------HHHHHHHHhCCCCCCeEEEEeCCCH-H
Confidence            56799999         8899999999999999985                 3455566666678889999998775 7


Q ss_pred             HHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          171 AARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       171 a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      +..++..|+.+||++|.++ ||+.+|.-
T Consensus        71 S~~aa~~L~~~G~~~v~~~-GG~~~~~~   97 (101)
T TIGR02981        71 SGMAKDILLDMGYTHAENA-GGIKDIAM   97 (101)
T ss_pred             HHHHHHHHHHcCCCeEEec-CCHHHhhh
Confidence            9999999999999999986 99999963

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.

>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional

Probab=99.63  E-value=1.5e-15  Score=121.21  Aligned_cols=80  Identities=16%  Similarity=0.240  Sum_probs=69.8

Q ss_pred             CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCCcc
Q 018869           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIF  169 (349)
Q Consensus        90 ~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVvy~~~g~~  169 (349)
                      .+-+|||+|         +.++|+.||||||+|+|+.                 ++.+.++.++.+++++||+||..|. 
T Consensus        19 ~~~~lIDvR---------~~~ef~~ghIpGAiniP~~-----------------~l~~~l~~l~~~~~~~IVlyC~~G~-   71 (104)
T PRK10287         19 AAEHWIDVR---------VPEQYQQEHVQGAINIPLK-----------------EVKERIATAVPDKNDTVKLYCNAGR-   71 (104)
T ss_pred             CCCEEEECC---------CHHHHhcCCCCccEECCHH-----------------HHHHHHHhcCCCCCCeEEEEeCCCh-
Confidence            456799999         8999999999999999975                 4556777778888899999998765 


Q ss_pred             hHHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          170 SAARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       170 ~a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      +|..+++.|..+||++|++ .||+.+|.
T Consensus        72 rS~~aa~~L~~~G~~~v~~-~GG~~~~~   98 (104)
T PRK10287         72 QSGQAKEILSEMGYTHAEN-AGGLKDIA   98 (104)
T ss_pred             HHHHHHHHHHHcCCCeEEe-cCCHHHHh
Confidence            8999999999999999987 69999996

>PRK01415 hypothetical protein; Validated

Probab=99.62  E-value=2e-15  Score=137.71  Aligned_cols=102  Identities=19%  Similarity=0.234  Sum_probs=84.3

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHH-Hc
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS-AL  152 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~-~~  152 (349)
                      ..+.|+++++.+++++++++|||||         ...||..||||||+|+|+..+.+              |.+++. ..
T Consensus       110 ~g~~i~p~e~~~ll~~~~~vvIDVR---------n~~E~~~Ghi~gAinip~~~f~e--------------~~~~~~~~~  166 (247)
T PRK01415        110 KGEYIEPKDWDEFITKQDVIVIDTR---------NDYEVEVGTFKSAINPNTKTFKQ--------------FPAWVQQNQ  166 (247)
T ss_pred             CccccCHHHHHHHHhCCCcEEEECC---------CHHHHhcCCcCCCCCCChHHHhh--------------hHHHHhhhh
Confidence            3567999999999998889999999         78999999999999999876532              222221 12


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhC
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~  199 (349)
                      .++++++||+||.+|. ++..++..|+..||++|+.|.||+.+|.+.
T Consensus       167 ~~~k~k~Iv~yCtgGi-Rs~kAa~~L~~~Gf~~Vy~L~GGi~~w~~~  212 (247)
T PRK01415        167 ELLKGKKIAMVCTGGI-RCEKSTSLLKSIGYDEVYHLKGGILQYLED  212 (247)
T ss_pred             hhcCCCeEEEECCCCh-HHHHHHHHHHHcCCCcEEEechHHHHHHHh
Confidence            3468899999997665 899999999999999999999999999864

>cd01533 4RHOD_Repeat_2 Member of the Rhodanese Homology Domain superfamily, repeat 2

Probab=99.62  E-value=1.1e-15  Score=123.08  Aligned_cols=80  Identities=19%  Similarity=0.258  Sum_probs=68.0

Q ss_pred             ccCHHHHHHHhhcC-CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          245 IWTLEQVKRNIEEG-TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       245 ~i~~~~v~~~~~~~-~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      .++.+++.+.++++ +.+|||+|++.||           ..||||||+|+|+.++             ...+.+.+.+++
T Consensus        11 ~i~~~~l~~~~~~~~~~~liDvR~~~e~-----------~~ghIpgainip~~~l-------------~~~~~~l~~~~~   66 (109)
T cd01533          11 SVSADELAALQARGAPLVVLDGRRFDEY-----------RKMTIPGSVSCPGAEL-------------VLRVGELAPDPR   66 (109)
T ss_pred             cCCHHHHHHHHhcCCCcEEEeCCCHHHH-----------hcCcCCCceeCCHHHH-------------HHHHHhcCCCCC
Confidence            58899999988754 5789999999999           6799999999998654             334555455678


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++||+||++|.||..++..|+.+||
T Consensus        67 ~~ivv~C~~G~rs~~a~~~L~~~G~   91 (109)
T cd01533          67 TPIVVNCAGRTRSIIGAQSLINAGL   91 (109)
T ss_pred             CeEEEECCCCchHHHHHHHHHHCCC
Confidence            9999999999999999999999998

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 2nd repeat which does contain the putative catalytic Cys residue.

>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily

Probab=99.61  E-value=1.1e-15  Score=126.75  Aligned_cols=91  Identities=22%  Similarity=0.329  Sum_probs=70.0

Q ss_pred             cCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCC--C-CC--------------CCH
Q 018869          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS--Q-TL--------------LPA  308 (349)
Q Consensus       246 i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~--~-~l--------------~~~  308 (349)
                      |+.+|+++.++ ++.+|||+|++.||           ..||||||+|+|+..+....  + .+              ...
T Consensus         1 ~s~~el~~~l~-~~~~iiDvR~~~e~-----------~~ghIpgAinip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (128)
T cd01520           1 ITAEDLLALRK-ADGPLIDVRSPKEF-----------FEGHLPGAINLPLLDDEERALVGTLYKQQGREAAIELGLELVS   68 (128)
T ss_pred             CCHHHHHHHHh-cCCEEEECCCHHHh-----------ccCcCCCcEEccCCChhHHHHhhhheeccCHHHHHHHHHHHHh
Confidence            46788988887 56899999999999           67999999999996543211  0 00              111


Q ss_pred             HHHHHHHHH---cCCCCCCCEEEEcC-ChHHHHHHHHHHHhCcC
Q 018869          309 DELKKRFEQ---EGISLEKPVVTACG-TGVTACILALVLFPVFF  348 (349)
Q Consensus       309 ~el~~~~~~---~~i~~~~~vivyC~-~G~rA~~~~~~L~~~g~  348 (349)
                      .++++.+..   .+++++++||+||+ +|.||+.++..|+.+||
T Consensus        69 ~~~~~~~~~~~~~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~  112 (128)
T cd01520          69 GKLKRILNEAWEARLERDPKLLIYCARGGMRSQSLAWLLESLGI  112 (128)
T ss_pred             hhHHHHHHHHHHhccCCCCeEEEEeCCCCccHHHHHHHHHHcCC
Confidence            344554443   48999999999997 79999999999999998

This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.

>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.60  E-value=4.9e-15  Score=118.73  Aligned_cols=99  Identities=28%  Similarity=0.471  Sum_probs=79.8

Q ss_pred             HHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCC-ceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCc
Q 018869           81 DWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPG-ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG  159 (349)
Q Consensus        81 ~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPG-Ai~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~  159 (349)
                      .........++.+|||||         ...+|+.+|||| ++|+|+..+.......                 ..+++++
T Consensus        10 ~~~~~~~~~~~~~liDvR---------~~~e~~~~~i~~~~~~ip~~~~~~~~~~~-----------------~~~~~~~   63 (110)
T COG0607          10 DEAALLLAGEDAVLLDVR---------EPEEYERGHIPGAAINIPLSELKAAENLL-----------------ELPDDDP   63 (110)
T ss_pred             HHHHHhhccCCCEEEecc---------ChhHhhhcCCCcceeeeecccchhhhccc-----------------ccCCCCe
Confidence            333344445579999999         669999999999 9999998765431100                 0468899


Q ss_pred             EEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccC
Q 018869          160 LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  206 (349)
Q Consensus       160 VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~  206 (349)
                      +||||..|. ++..++..|+..||++++.++||+.+|...++|++..
T Consensus        64 ivv~C~~G~-rS~~aa~~L~~~G~~~~~~l~gG~~~w~~~~~~~~~~  109 (110)
T COG0607          64 IVVYCASGV-RSAAAAAALKLAGFTNVYNLDGGIDAWKGAGLPLVRG  109 (110)
T ss_pred             EEEEeCCCC-ChHHHHHHHHHcCCccccccCCcHHHHHhcCCCcccC
Confidence            999998876 7899999999999999999999999999999987653

>PRK05320 rhodanese superfamily protein; Provisional

Probab=99.60  E-value=2.7e-15  Score=138.54  Aligned_cols=102  Identities=25%  Similarity=0.339  Sum_probs=80.4

Q ss_pred             CCCcccHHHHHHhcCC------CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHH
Q 018869           74 KEPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~------~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~  147 (349)
                      ....|+++++.+++.+      ++.+|||||         +..||+.||||||+|+|+..+...          ++.+.+
T Consensus       108 ~~~~is~~el~~~l~~~~~~~~~~~vlIDVR---------~~~E~~~Ghi~GAiniPl~~f~~~----------~~~l~~  168 (257)
T PRK05320        108 RAPSVDAATLKRWLDQGHDDAGRPVVMLDTR---------NAFEVDVGTFDGALDYRIDKFTEF----------PEALAA  168 (257)
T ss_pred             cCceeCHHHHHHHHhccccccCCCeEEEECC---------CHHHHccCccCCCEeCChhHhhhh----------HHHHHh
Confidence            3467999999988765      247999999         789999999999999999765321          111222


Q ss_pred             HHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          148 AVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       148 ~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      ....   .++++||+||.+|. ++..++..|+..||+||+.|.||+.+|.+
T Consensus       169 ~~~~---~kdk~IvvyC~~G~-Rs~~Aa~~L~~~Gf~~V~~L~GGi~~w~~  215 (257)
T PRK05320        169 HRAD---LAGKTVVSFCTGGI-RCEKAAIHMQEVGIDNVYQLEGGILKYFE  215 (257)
T ss_pred             hhhh---cCCCeEEEECCCCH-HHHHHHHHHHHcCCcceEEeccCHHHHHH
Confidence            2221   26789999998765 89999999999999999999999999975

>PLN02160 thiosulfate sulfurtransferase

Probab=99.57  E-value=8.7e-15  Score=122.70  Aligned_cols=89  Identities=17%  Similarity=0.254  Sum_probs=73.6

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCC--cccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS--KCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA--~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~  322 (349)
                      .++.+++.+.+++ +.+|||+|++.||           ..||||||  +|+|+..+. ....+++.+.+.++..  .+++
T Consensus        16 ~i~~~e~~~~~~~-~~~lIDVR~~~E~-----------~~ghIpgA~~iniP~~~~~-~~~~l~~~~~~~~~~~--~~~~   80 (136)
T PLN02160         16 SVDVSQAKTLLQS-GHQYLDVRTQDEF-----------RRGHCEAAKIVNIPYMLNT-PQGRVKNQEFLEQVSS--LLNP   80 (136)
T ss_pred             EeCHHHHHHHHhC-CCEEEECCCHHHH-----------hcCCCCCcceecccchhcC-cccccCCHHHHHHHHh--ccCC
Confidence            5788999888875 4689999999999           67999999  899986653 4456777666655443  3678


Q ss_pred             CCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          323 EKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       323 ~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++||+||++|.||..++..|...||
T Consensus        81 ~~~IivyC~sG~RS~~Aa~~L~~~G~  106 (136)
T PLN02160         81 ADDILVGCQSGARSLKATTELVAAGY  106 (136)
T ss_pred             CCcEEEECCCcHHHHHHHHHHHHcCC
Confidence            89999999999999999999999998

>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily

Probab=99.56  E-value=6.6e-15  Score=116.53  Aligned_cols=85  Identities=11%  Similarity=0.176  Sum_probs=66.7

Q ss_pred             cCHHHHHHHhhc-CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          246 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       246 i~~~~v~~~~~~-~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      ++.+++.+.+++ .+.+|||+|++.||           ..||||||+|+|+..+...   +  .+.+.+.+.  .+++++
T Consensus         1 is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghi~ga~~ip~~~~~~~---~--~~~~~~~~~--~~~~~~   62 (100)
T cd01523           1 LDPEDLYARLLAGQPLFILDVRNESDY-----------ERWKIDGENNTPYFDPYFD---F--LEIEEDILD--QLPDDQ   62 (100)
T ss_pred             CCHHHHHHHHHcCCCcEEEEeCCHHHH-----------hhcccCCCcccccccchHH---H--HHhhHHHHh--hCCCCC
Confidence            456788888775 35789999999999           6799999999999776431   0  011122333  367899


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcC
Q 018869          325 PVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +||+||.+|.||..++..|+..||
T Consensus        63 ~ivv~C~~G~rs~~aa~~L~~~G~   86 (100)
T cd01523          63 EVTVICAKEGSSQFVAELLAERGY   86 (100)
T ss_pred             eEEEEcCCCCcHHHHHHHHHHcCc
Confidence            999999999999999999999998

This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=99.56  E-value=1.3e-14  Score=142.30  Aligned_cols=101  Identities=21%  Similarity=0.346  Sum_probs=83.5

Q ss_pred             CCCcccHHHHHHhcCCC-CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           74 KEPVVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~-~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      ....|+++++++++++. +++|||+|         +.++|..||||||+|+|+..+...           +.    +.  
T Consensus       285 ~~~~Is~~el~~~l~~~~~~~lIDvR---------~~~ef~~ghIpGAinip~~~l~~~-----------~~----~~--  338 (392)
T PRK07878        285 AGSTITPRELKEWLDSGKKIALIDVR---------EPVEWDIVHIPGAQLIPKSEILSG-----------EA----LA--  338 (392)
T ss_pred             CCCccCHHHHHHHHhCCCCeEEEECC---------CHHHHhcCCCCCCEEcChHHhcch-----------hH----Hh--
Confidence            45679999999998754 57899999         789999999999999998764321           11    11  


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCC
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  201 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~  201 (349)
                      .++++++|||||..|. +|.++++.|+..||++|++|+||+.+|..+..
T Consensus       339 ~l~~d~~iVvyC~~G~-rS~~aa~~L~~~G~~~V~~L~GG~~~W~~~~~  386 (392)
T PRK07878        339 KLPQDRTIVLYCKTGV-RSAEALAALKKAGFSDAVHLQGGVVAWAKQVD  386 (392)
T ss_pred             hCCCCCcEEEEcCCCh-HHHHHHHHHHHcCCCcEEEecCcHHHHHHhcC
Confidence            3578899999998765 79999999999999999999999999987643

>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily

Probab=99.56  E-value=4.3e-15  Score=122.16  Aligned_cols=88  Identities=18%  Similarity=0.244  Sum_probs=71.2

Q ss_pred             cccCHHHHHHHhhc-CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHH-HHHHcCCC
Q 018869          244 LIWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK-RFEQEGIS  321 (349)
Q Consensus       244 ~~i~~~~v~~~~~~-~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~-~~~~~~i~  321 (349)
                      ..++.+++.+.+++ .+.+|||+|++.||           ..||||||+|+|+..+.+....      +.. .+...+++
T Consensus         8 ~~is~~el~~~~~~~~~~~ivDvR~~~e~-----------~~~hIpgai~ip~~~~~~~~~~------~~~~~~~~~~~~   70 (122)
T cd01526           8 ERVSVKDYKNILQAGKKHVLLDVRPKVHF-----------EICRLPEAINIPLSELLSKAAE------LKSLQELPLDND   70 (122)
T ss_pred             cccCHHHHHHHHhCCCCeEEEEcCCHHHh-----------hcccCCCCeEccHHHHhhhhhh------hhhhhhcccccC
Confidence            36788999988876 56789999999999           6799999999999886542221      211 22334678


Q ss_pred             CCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          322 LEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       322 ~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++++||+||++|.||..++..|+.+||
T Consensus        71 ~~~~ivv~C~~G~rs~~aa~~L~~~G~   97 (122)
T cd01526          71 KDSPIYVVCRRGNDSQTAVRKLKELGL   97 (122)
T ss_pred             CCCcEEEECCCCCcHHHHHHHHHHcCC
Confidence            999999999999999999999999998

This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.

>cd01534 4RHOD_Repeat_3 Member of the Rhodanese Homology Domain superfamily, repeat 3

Probab=99.55  E-value=4.3e-15  Score=116.60  Aligned_cols=79  Identities=24%  Similarity=0.273  Sum_probs=62.3

Q ss_pred             cCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       246 i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      ++.+++.+.++++  +.+|||+|++.||           ..||||||+|+|+..+...             .......++
T Consensus         1 is~~~l~~~~~~~~~~~~liDvR~~~e~-----------~~ghipga~~ip~~~l~~~-------------~~~~~~~~~   56 (95)
T cd01534           1 IGAAELARWAAEGDRTVYRFDVRTPEEY-----------EAGHLPGFRHTPGGQLVQE-------------TDHFAPVRG   56 (95)
T ss_pred             CCHHHHHHHHHcCCCCeEEEECCCHHHH-----------HhCCCCCcEeCCHHHHHHH-------------HHHhcccCC
Confidence            4667888887654  4779999999999           7799999999998765421             111111247


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++||+||.+|.||+.++..|+.+||
T Consensus        57 ~~iv~~c~~G~rs~~aa~~L~~~G~   81 (95)
T cd01534          57 ARIVLADDDGVRADMTASWLAQMGW   81 (95)
T ss_pred             CeEEEECCCCChHHHHHHHHHHcCC
Confidence            8999999999999999999999998

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 3rd repeat which does not contain the putative catalytic Cys residue.

>KOG1530 consensus Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.53  E-value=1.4e-14  Score=116.93  Aligned_cols=95  Identities=23%  Similarity=0.359  Sum_probs=76.9

Q ss_pred             CccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 018869          242 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (349)
Q Consensus       242 ~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~  321 (349)
                      ....++.++++++++.+++++||||+++||           +.||||.++|||+..... .+.++ ..++.+.+....-+
T Consensus        21 ~~~sv~~~qvk~L~~~~~~~llDVRepeEf-----------k~gh~~~siNiPy~~~~~-~~~l~-~~eF~kqvg~~kp~   87 (136)
T KOG1530|consen   21 NPQSVSVEQVKNLLQHPDVVLLDVREPEEF-----------KQGHIPASINIPYMSRPG-AGALK-NPEFLKQVGSSKPP   87 (136)
T ss_pred             CcEEEEHHHHHHHhcCCCEEEEeecCHHHh-----------hccCCcceEecccccccc-ccccC-CHHHHHHhcccCCC
Confidence            345688999999999888999999999999           899999999999865432 23444 45556666544445


Q ss_pred             CCCCEEEEcCChHHHHHHHHHHHhCcCC
Q 018869          322 LEKPVVTACGTGVTACILALVLFPVFFL  349 (349)
Q Consensus       322 ~~~~vivyC~~G~rA~~~~~~L~~~g~~  349 (349)
                      .|++||++|.+|.|+-.|.-.|...||.
T Consensus        88 ~d~eiIf~C~SG~Rs~~A~~~l~s~Gyk  115 (136)
T KOG1530|consen   88 HDKEIIFGCASGVRSLKATKILVSAGYK  115 (136)
T ss_pred             CCCcEEEEeccCcchhHHHHHHHHcCcc
Confidence            6789999999999999999999999983

>cd01522 RHOD_1 Member of the Rhodanese Homology Domain superfamily, subgroup 1

Probab=99.52  E-value=2.6e-14  Score=116.71  Aligned_cols=87  Identities=20%  Similarity=0.299  Sum_probs=68.4

Q ss_pred             cCHHHHHHHhhc-CCceEEeccCCCcccccCCCCCCCCC-ccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          246 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIR-SGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       246 i~~~~v~~~~~~-~~~~lID~R~~~ey~G~~~~~~~~~~-~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      ++.+++.+.+++ ++.+|||+|++.||           . .||||||+|+|+.++.+...   . ..+...+... ++++
T Consensus         1 is~~el~~~l~~~~~~~vIDvR~~~e~-----------~~~ghIpgA~~ip~~~~~~~~~---~-~~~~~~l~~~-~~~~   64 (117)
T cd01522           1 LTPAEAWALLQADPQAVLVDVRTEAEW-----------KFVGGVPDAVHVAWQVYPDMEI---N-PNFLAELEEK-VGKD   64 (117)
T ss_pred             CCHHHHHHHHHhCCCeEEEECCCHHHH-----------hcccCCCCceecchhhcccccc---C-HHHHHHHHhh-CCCC
Confidence            466788888876 56889999999999           5 79999999999988764211   1 2233333332 3788


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++||+||++|.+|..++..|..+||
T Consensus        65 ~~ivv~C~~G~rs~~aa~~L~~~G~   89 (117)
T cd01522          65 RPVLLLCRSGNRSIAAAEAAAQAGF   89 (117)
T ss_pred             CeEEEEcCCCccHHHHHHHHHHCCC
Confidence            9999999999999999999999998

This CD includes the putative rhodanese-related sulfurtransferases of several uncharacterized proteins.

>cd01527 RHOD_YgaP Member of the Rhodanese Homology Domain superfamily

Probab=99.52  E-value=1.8e-14  Score=113.71  Aligned_cols=77  Identities=17%  Similarity=0.276  Sum_probs=65.4

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .++.+++.+.++++ .+|||+|++++|           ..||||||+|+|+..+....               ..+++++
T Consensus         3 ~i~~~el~~~~~~~-~~liDvR~~~e~-----------~~~hi~ga~~ip~~~~~~~~---------------~~~~~~~   55 (99)
T cd01527           3 TISPNDACELLAQG-AVLVDIREPDEY-----------LRERIPGARLVPLSQLESEG---------------LPLVGAN   55 (99)
T ss_pred             ccCHHHHHHHHHCC-CEEEECCCHHHH-----------HhCcCCCCEECChhHhcccc---------------cCCCCCC
Confidence            46788998888765 889999999999           67999999999998764311               1267889


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcC
Q 018869          325 PVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +||+||++|.+|+.++..|.++||
T Consensus        56 ~iv~~c~~g~~s~~~~~~L~~~g~   79 (99)
T cd01527          56 AIIFHCRSGMRTQQNAERLAAISA   79 (99)
T ss_pred             cEEEEeCCCchHHHHHHHHHHcCC
Confidence            999999999999999999999887

This CD includes Escherichia coli YgaP, and similar uncharacterized putative rhodanese-related sulfurtransferases.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.50  E-value=5.3e-14  Score=136.14  Aligned_cols=95  Identities=22%  Similarity=0.356  Sum_probs=77.8

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      ...++++++.+...  +.+|||+|         +.++|..||||||+|+|+..+...                 +....+
T Consensus       260 ~~~i~~~~~~~~~~--~~~IIDVR---------~~~ef~~ghIpgAinip~~~l~~~-----------------~~~~~~  311 (355)
T PRK05597        260 GEVLDVPRVSALPD--GVTLIDVR---------EPSEFAAYSIPGAHNVPLSAIREG-----------------ANPPSV  311 (355)
T ss_pred             ccccCHHHHHhccC--CCEEEECC---------CHHHHccCcCCCCEEeCHHHhhhc-----------------cccccC
Confidence            34688999885543  57899999         789999999999999998764321                 111235


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      +++++||+||..|. ++.++++.|+.+||++|++|+||+.+|.+
T Consensus       312 ~~~~~IvvyC~~G~-rS~~Aa~~L~~~G~~nV~~L~GGi~~W~~  354 (355)
T PRK05597        312 SAGDEVVVYCAAGV-RSAQAVAILERAGYTGMSSLDGGIEGWLD  354 (355)
T ss_pred             CCCCeEEEEcCCCH-HHHHHHHHHHHcCCCCEEEecCcHHHHhh
Confidence            67889999998765 89999999999999999999999999975

>cd01525 RHOD_Kc Member of the Rhodanese Homology Domain superfamily

Probab=99.50  E-value=2.9e-14  Score=113.68  Aligned_cols=88  Identities=26%  Similarity=0.338  Sum_probs=65.9

Q ss_pred             cCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       246 i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      ++.++++++++++  +.+|||+|++.||           ..||||||+|+|+..+......+....+. +.+..   .++
T Consensus         1 is~~~l~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~~~-~~~~~---~~~   65 (105)
T cd01525           1 ISVYDVIRLLDNSPAKLAAVDIRSSPDF-----------RRGHIEGSINIPFSSVFLKEGELEQLPTV-PRLEN---YKG   65 (105)
T ss_pred             CCHHHHHHHHhCCCCCeEEEECCCHHHH-----------hCCccCCCEeCCHHHhcccccccccccch-HHHHh---hcC
Confidence            4678899888753  5789999999999           78999999999998775432222111111 12221   247


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++||+||.+|.+|..++..|+.+||
T Consensus        66 ~~vv~~c~~g~~s~~~a~~L~~~G~   90 (105)
T cd01525          66 KIIVIVSHSHKHAALFAAFLVKCGV   90 (105)
T ss_pred             CeEEEEeCCCccHHHHHHHHHHcCC
Confidence            8999999999999999999999998

Included in this CD are the rhodanese-like domains found C-terminal of the serine/threonine protein kinases catalytic (S_TKc) domain and the Tre-2, BUB2p, Cdc16p (TBC) domain. The putative active site Cys residue is not present in this CD.

>cd01447 Polysulfide_ST Polysulfide-sulfurtransferase - Rhodanese Homology Domain

Probab=99.50  E-value=3e-14  Score=112.98  Aligned_cols=86  Identities=20%  Similarity=0.303  Sum_probs=65.8

Q ss_pred             cCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 018869          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (349)
Q Consensus       246 i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~  325 (349)
                      ++.+++.+.+++++.+|||+|++.+|.          +.||||||+|+|+..+...    ...+   ..+...+++++++
T Consensus         1 is~~el~~~~~~~~~~iiDvR~~~~~~----------~~ghIpga~~ip~~~~~~~----~~~~---~~~~~~~~~~~~~   63 (103)
T cd01447           1 LSPEDARALLGSPGVLLVDVRDPRELE----------RTGMIPGAFHAPRGMLEFW----ADPD---SPYHKPAFAEDKP   63 (103)
T ss_pred             CCHHHHHHHHhCCCeEEEECCCHHHHH----------hcCCCCCcEEcccchhhhh----cCcc---ccccccCCCCCCe
Confidence            467888888876678999999998872          4699999999998665210    0000   0112235788999


Q ss_pred             EEEEcCChHHHHHHHHHHHhCcC
Q 018869          326 VVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       326 vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ||+||++|.+|..++..|+.+||
T Consensus        64 ivv~c~~g~~s~~~~~~l~~~G~   86 (103)
T cd01447          64 FVFYCASGWRSALAGKTLQDMGL   86 (103)
T ss_pred             EEEEcCCCCcHHHHHHHHHHcCh
Confidence            99999999999999999999997

This domain is believed to serve as a polysulfide binding and transferase domain in anaerobic gram-negative bacteria, functioning in oxidative phosphorylation with polysulfide-sulfur as a terminal electron acceptor. The active site contains the same conserved cysteine that is the catalytic residue in other Rhodanese Homology Domain proteins.

>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2

Probab=99.48  E-value=8e-14  Score=110.55  Aligned_cols=80  Identities=18%  Similarity=0.310  Sum_probs=63.9

Q ss_pred             cCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       246 i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      ++.+++.+.++.+  +.+|||+|++.||           ..||||||+|+|+.++.+          ..+.+..  .+++
T Consensus         2 i~~~~l~~~~~~~~~~~~iiDvR~~~e~-----------~~~hI~ga~~ip~~~~~~----------~~~~~~~--~~~~   58 (101)
T cd01528           2 ISVAELAEWLADEREEPVLIDVREPEEL-----------EIAFLPGFLHLPMSEIPE----------RSKELDS--DNPD   58 (101)
T ss_pred             CCHHHHHHHHhcCCCCCEEEECCCHHHH-----------hcCcCCCCEecCHHHHHH----------HHHHhcc--cCCC
Confidence            5678888888754  5789999999999           678999999999876532          1111211  2568


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++||+||++|.||+.++..|..+||
T Consensus        59 ~~vv~~c~~g~rs~~~~~~l~~~G~   83 (101)
T cd01528          59 KDIVVLCHHGGRSMQVAQWLLRQGF   83 (101)
T ss_pred             CeEEEEeCCCchHHHHHHHHHHcCC
Confidence            9999999999999999999999998

Subgroup 2 includes uncharacterized putative rhodanese-related domains.

>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily

Probab=99.48  E-value=1e-13  Score=107.69  Aligned_cols=75  Identities=23%  Similarity=0.479  Sum_probs=62.7

Q ss_pred             CHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCE
Q 018869          247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPV  326 (349)
Q Consensus       247 ~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~v  326 (349)
                      +++++.+.++ ++.++||+|++++|           ..||||||+|+|+.++             ++.+.  .++++++|
T Consensus         2 ~~~e~~~~~~-~~~~iiD~R~~~~~-----------~~~hipgA~~ip~~~~-------------~~~~~--~~~~~~~v   54 (90)
T cd01524           2 QWHELDNYRA-DGVTLIDVRTPQEF-----------EKGHIKGAINIPLDEL-------------RDRLN--ELPKDKEI   54 (90)
T ss_pred             CHHHHHHHhc-CCCEEEECCCHHHH-----------hcCCCCCCEeCCHHHH-------------HHHHH--hcCCCCcE
Confidence            4677888774 56789999999999           6799999999997543             33333  37888999


Q ss_pred             EEEcCChHHHHHHHHHHHhCcC
Q 018869          327 VTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       327 ivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      |+||.+|.+|..++..|+.+||
T Consensus        55 vl~c~~g~~a~~~a~~L~~~G~   76 (90)
T cd01524          55 IVYCAVGLRGYIAARILTQNGF   76 (90)
T ss_pred             EEEcCCChhHHHHHHHHHHCCC
Confidence            9999999999999999999997

Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.

>PRK07411 hypothetical protein; Validated

Probab=99.48  E-value=1.4e-13  Score=134.64  Aligned_cols=104  Identities=22%  Similarity=0.340  Sum_probs=82.0

Q ss_pred             CCCcccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 018869           74 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~  151 (349)
                      ....|+++++.+++++.  +.+|||+|         ++.+|+.||||||+|+|+..+....        ..+++.+    
T Consensus       280 ~~~~Is~~el~~~l~~~~~~~vlIDVR---------~~~E~~~ghIpGAiniP~~~l~~~~--------~~~~l~~----  338 (390)
T PRK07411        280 EIPEMTVTELKALLDSGADDFVLIDVR---------NPNEYEIARIPGSVLVPLPDIENGP--------GVEKVKE----  338 (390)
T ss_pred             ccCccCHHHHHHHHhCCCCCeEEEECC---------CHHHhccCcCCCCEEccHHHhhccc--------chHHHhh----
Confidence            44679999999988653  57899999         7899999999999999998764321        0122222    


Q ss_pred             cCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCC
Q 018869          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD  202 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~p  202 (349)
                        +.++++||+||..|. +|.++++.|+.+||++ +.|+||+.+|.++..|
T Consensus       339 --l~~d~~IVvyC~~G~-RS~~aa~~L~~~G~~~-~~l~GG~~~W~~~~~p  385 (390)
T PRK07411        339 --LLNGHRLIAHCKMGG-RSAKALGILKEAGIEG-TNVKGGITAWSREVDP  385 (390)
T ss_pred             --cCCCCeEEEECCCCH-HHHHHHHHHHHcCCCe-EEecchHHHHHHhcCC
Confidence              346889999998765 8999999999999985 5799999999876443

>TIGR03865 PQQ_CXXCW PQQ-dependent catabolism-associated CXXCW motif protein

Probab=99.47  E-value=2.1e-13  Score=117.61  Aligned_cols=102  Identities=17%  Similarity=0.237  Sum_probs=73.3

Q ss_pred             CCccccCHHHHHHHhhcCCceEEeccCCCc----c-cccCCCCCCCCCccccCCCcccCcccccCCCCCCCCH--HHHHH
Q 018869          241 QPHLIWTLEQVKRNIEEGTYQLVDARSKAR----F-DGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPA--DELKK  313 (349)
Q Consensus       241 ~~~~~i~~~~v~~~~~~~~~~lID~R~~~e----y-~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~--~el~~  313 (349)
                      .....++.+++.+++++++.+|||+|++++    | .|..-.   ....||||||+|+|+..+    ..+.++  +.+.+
T Consensus        33 ~~~~~vs~~el~~~l~~~~~~lIDVR~~~~~~~e~~~G~~~~---~~~~~HIPGAv~ip~~~~----~~l~~~~~~~~~~  105 (162)
T TIGR03865        33 KGARVLDTEAAQALLARGPVALIDVYPRPPKPKNLLEGTVWR---DEPRLNIPGSLWLPNTGY----GNLAPAWQAYFRR  105 (162)
T ss_pred             CCccccCHHHHHHHHhCCCcEEEECCCCccccccccccceec---cccCCCCCCcEEecccCC----CCCCCchhHHHHH
Confidence            344679999999999887889999998763    3 221100   013379999999997422    223332  33666


Q ss_pred             HHHHcCC-CCCCCEEEEcCChH-HHHHHHHHHHhCcCC
Q 018869          314 RFEQEGI-SLEKPVVTACGTGV-TACILALVLFPVFFL  349 (349)
Q Consensus       314 ~~~~~~i-~~~~~vivyC~~G~-rA~~~~~~L~~~g~~  349 (349)
                      .+.+.+. +++++||+||++|. +|..++..|+.+||.
T Consensus       106 ~l~~~~~~~~d~~IVvYC~~G~~~S~~aa~~L~~~G~~  143 (162)
T TIGR03865       106 GLERATGGDKDRPLVFYCLADCWMSWNAAKRALAYGYS  143 (162)
T ss_pred             HHHHhcCCCCCCEEEEEECCCCHHHHHHHHHHHhcCCc
Confidence            7766544 78999999999996 888899999999983

Members of this protein family have a CXXXCW motif, consistent with a possible role in redox cofactor binding. This protein family shows strong relationships by phylogenetic profiling and conserved gene neighborhoods with a transport system for alcohols metabolized by PQQ-dependent enzymes.

>cd01444 GlpE_ST GlpE sulfurtransferase (ST) and homologs are members of the Rhodanese Homology Domain superfamily

Probab=99.47  E-value=1.3e-13  Score=107.89  Aligned_cols=77  Identities=21%  Similarity=0.376  Sum_probs=64.6

Q ss_pred             cCHHHHHHHhhc-CCceEEeccCCCcccccCCCCCCCCCc--cccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 018869          246 WTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRS--GHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (349)
Q Consensus       246 i~~~~v~~~~~~-~~~~lID~R~~~ey~G~~~~~~~~~~~--GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~  322 (349)
                      ++.+++.+.+++ .+.+|||+|++.+|           ..  ||||||+|+|+..+             .+.+.  .+++
T Consensus         2 i~~~~~~~~~~~~~~~~ivDvR~~~e~-----------~~~~~hi~ga~~ip~~~~-------------~~~~~--~~~~   55 (96)
T cd01444           2 ISVDELAELLAAGEAPVLLDVRDPASY-----------AALPDHIPGAIHLDEDSL-------------DDWLG--DLDR   55 (96)
T ss_pred             cCHHHHHHHHhcCCCcEEEECCCHHHH-----------hcccCCCCCCeeCCHHHH-------------HHHHh--hcCC
Confidence            567788887765 46899999999999           55  99999999998654             23333  3788


Q ss_pred             CCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          323 EKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       323 ~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++||+||.+|.+|+.++..|+..||
T Consensus        56 ~~~ivv~c~~g~~s~~a~~~l~~~G~   81 (96)
T cd01444          56 DRPVVVYCYHGNSSAQLAQALREAGF   81 (96)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHcCC
Confidence            99999999999999999999999998

Unlike other rhodanese sulfurtransferases, GlpE is a single domain protein but indications are that it functions as a dimer. The active site contains a catalytically active cysteine.

>smart00450 RHOD Rhodanese Homology Domain

Probab=99.46  E-value=1.2e-13  Score=107.73  Aligned_cols=80  Identities=30%  Similarity=0.520  Sum_probs=67.6

Q ss_pred             CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHHH
Q 018869          258 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC  337 (349)
Q Consensus       258 ~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA~  337 (349)
                      ++..|||+|++.+|           ..||||||+|+|+..+......+ ...++.+.+...+++++++||+||.+|.+|.
T Consensus         3 ~~~~ivDvR~~~e~-----------~~~hi~ga~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~iv~~c~~g~~a~   70 (100)
T smart00450        3 EKVVLLDVRSPEEY-----------EGGHIPGAVNIPLSELLDRRGEL-DILEFEELLKRLGLDKDKPVVVYCRSGNRSA   70 (100)
T ss_pred             CCEEEEECCCHHHh-----------ccCCCCCceeCCHHHhccCCCCc-CHHHHHHHHHHcCCCCCCeEEEEeCCCcHHH
Confidence            46789999999999           67999999999998876543322 2337777777778999999999999999999


Q ss_pred             HHHHHHHhCcCC
Q 018869          338 ILALVLFPVFFL  349 (349)
Q Consensus       338 ~~~~~L~~~g~~  349 (349)
                      .++..|+..||.
T Consensus        71 ~~~~~l~~~G~~   82 (100)
T smart00450       71 KAAWLLRELGFK   82 (100)
T ss_pred             HHHHHHHHcCCC
Confidence            999999999983

An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.

>cd01530 Cdc25 Cdc25 phosphatases are members of the Rhodanese Homology Domain superfamily

Probab=99.45  E-value=1.4e-13  Score=113.17  Aligned_cols=79  Identities=18%  Similarity=0.290  Sum_probs=63.0

Q ss_pred             ccCHHHHHHHhhc------CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH-
Q 018869          245 IWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ-  317 (349)
Q Consensus       245 ~i~~~~v~~~~~~------~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~-  317 (349)
                      .++.+++.+.+.+      ++++|||+|++.||           ..||||||+|+|+.+            ++.+.+.+ 
T Consensus         3 ~Is~~el~~~l~~~~~~~~~~~~liDvR~~~e~-----------~~ghI~gA~~ip~~~------------~l~~~~~~~   59 (121)
T cd01530           3 RISPETLARLLQGKYDNFFDKYIIIDCRFPYEY-----------NGGHIKGAVNLSTKD------------ELEEFFLDK   59 (121)
T ss_pred             ccCHHHHHHHHhcccccCCCCEEEEECCCHHHH-----------hCCcCCCCEeCCcHH------------HHHHHHHHh
Confidence            3678888888865      36889999999999           679999999999852            22222322 


Q ss_pred             ---cCCCCCCCEEEEcC-ChHHHHHHHHHHHhC
Q 018869          318 ---EGISLEKPVVTACG-TGVTACILALVLFPV  346 (349)
Q Consensus       318 ---~~i~~~~~vivyC~-~G~rA~~~~~~L~~~  346 (349)
                         .+++++++||+||+ +|.||..++..|+..
T Consensus        60 ~~~~~~~~~~~vv~yC~~sg~rs~~aa~~L~~~   92 (121)
T cd01530          60 PGVASKKKRRVLIFHCEFSSKRGPRMARHLRNL   92 (121)
T ss_pred             hcccccCCCCEEEEECCCccccHHHHHHHHHHH
Confidence               35789999999997 999999999999974

They activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. Cdc25A phosphatase functions to regulate S phase entry and Cdc25B is required for G2/M phase transition of the cell cycle. The Cdc25 domain binds oxyanions at the catalytic site and has the signature motif (H/YCxxxxxR).

>PF00581 Rhodanese: Rhodanese-like domain This Prosite entry represents a subset of this family

Probab=99.45  E-value=7.3e-14  Score=112.02  Aligned_cols=90  Identities=30%  Similarity=0.522  Sum_probs=72.3

Q ss_pred             CHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHc--CCCCCC
Q 018869          247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE--GISLEK  324 (349)
Q Consensus       247 ~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~--~i~~~~  324 (349)
                      |++|+++.+++++.+|||+|++.+|           ..||||||+|+|+..+ .........+.+.+.+...  +++.++
T Consensus         1 s~~el~~~l~~~~~~liD~R~~~~~-----------~~~hI~ga~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (113)
T PF00581_consen    1 SPEELKEMLENESVLLIDVRSPEEY-----------ERGHIPGAVNIPFPSL-DPDEPSLSEDKLDEFLKELGKKIDKDK   68 (113)
T ss_dssp             -HHHHHHHHTTTTEEEEEESSHHHH-----------HHSBETTEEEEEGGGG-SSSSSBCHHHHHHHHHHHHTHGSTTTS
T ss_pred             CHHHHHhhhhCCCeEEEEeCCHHHH-----------HcCCCCCCcccccccc-ccccccccccccccccccccccccccc
Confidence            4688999887788999999999999           7799999999999887 3344556666666655544  458889


Q ss_pred             CEEEEcCChHHHHHHHHH-----HHhCcC
Q 018869          325 PVVTACGTGVTACILALV-----LFPVFF  348 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~-----L~~~g~  348 (349)
                      +||+||.+|.++..++..     |..+||
T Consensus        69 ~iv~yc~~~~~~~~~~~~~~~~~l~~~g~   97 (113)
T PF00581_consen   69 DIVFYCSSGWRSGSAAAARVAWILKKLGF   97 (113)
T ss_dssp             EEEEEESSSCHHHHHHHHHHHHHHHHTTT
T ss_pred             cceeeeecccccchhHHHHHHHHHHHcCC
Confidence            999999999888877666     888887

; InterPro: IPR001763 Rhodanese, a sulphurtransferase involved in cyanide detoxification (see IPR001307 from INTERPRO) shares evolutionary relationship with a large family of proteins [], including Cdc25 phosphatase catalytic domain. non-catalytic domains of eukaryotic dual-specificity MAPK-phosphatases. non-catalytic domains of yeast PTP-type MAPK-phosphatases. non-catalytic domains of yeast Ubp4, Ubp5, Ubp7. non-catalytic domains of mammalian Ubp-Y. Drosophila heat shock protein HSP-67BB. several bacterial cold-shock and phage shock proteins. plant senescence associated proteins. catalytic and non-catalytic domains of rhodanese (see IPR001307 from INTERPRO). Rhodanese has an internal duplication. This domain is found as a single copy in other proteins, including phosphatases and ubiquitin C-terminal hydrolases [].; PDB: 2J6P_D 2FSX_A 1UAR_A 1OKG_A 1GMX_A 1GN0_A 3NTD_B 3NTA_B 3NT6_A 1C25_A ....

>PRK00162 glpE thiosulfate sulfurtransferase; Validated

Probab=99.44  E-value=2.3e-13  Score=109.29  Aligned_cols=78  Identities=28%  Similarity=0.403  Sum_probs=67.0

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .++.+++.+.+++++.+|||+|++.||           ..||||||+|+|+..             |.+.+..  +++++
T Consensus         6 ~is~~el~~~l~~~~~~ivDvR~~~e~-----------~~ghi~gA~~ip~~~-------------l~~~~~~--~~~~~   59 (108)
T PRK00162          6 CINVEQAHQKLQEGGAVLVDIRDPQSF-----------AMGHAPGAFHLTNDS-------------LGAFMRQ--ADFDT   59 (108)
T ss_pred             ccCHHHHHHHHHcCCCEEEEcCCHHHH-----------hcCCCCCCeECCHHH-------------HHHHHHh--cCCCC
Confidence            578899999887777899999999999           679999999999743             3444443  67889


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcC
Q 018869          325 PVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +|++||.+|.+|..++..|+..||
T Consensus        60 ~ivv~c~~g~~s~~a~~~L~~~G~   83 (108)
T PRK00162         60 PVMVMCYHGNSSQGAAQYLLQQGF   83 (108)
T ss_pred             CEEEEeCCCCCHHHHHHHHHHCCc
Confidence            999999999999999999999998

>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE

Probab=99.42  E-value=2.4e-13  Score=108.08  Aligned_cols=67  Identities=16%  Similarity=0.329  Sum_probs=56.4

Q ss_pred             CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHHHH
Q 018869          259 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACI  338 (349)
Q Consensus       259 ~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA~~  338 (349)
                      ...+||+|+++||           ..||||||+|+|+.++             ++.+.....+++++||+||++|.||..
T Consensus        18 ~~~lIDvR~~~ef-----------~~ghIpgAinip~~~l-------------~~~l~~~~~~~~~~vvlyC~~G~rS~~   73 (101)
T TIGR02981        18 AEHWIDVRIPEQY-----------QQEHIQGAINIPLKEI-------------KEHIATAVPDKNDTVKLYCNAGRQSGM   73 (101)
T ss_pred             CCEEEECCCHHHH-----------hcCCCCCCEECCHHHH-------------HHHHHHhCCCCCCeEEEEeCCCHHHHH
Confidence            4679999999999           6799999999998543             444554445678899999999999999


Q ss_pred             HHHHHHhCcCC
Q 018869          339 LALVLFPVFFL  349 (349)
Q Consensus       339 ~~~~L~~~g~~  349 (349)
                      ++..|+.+||.
T Consensus        74 aa~~L~~~G~~   84 (101)
T TIGR02981        74 AKDILLDMGYT   84 (101)
T ss_pred             HHHHHHHcCCC
Confidence            99999999983

Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.

>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily

Probab=99.41  E-value=3.9e-13  Score=105.58  Aligned_cols=72  Identities=25%  Similarity=0.373  Sum_probs=58.9

Q ss_pred             cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHH
Q 018869          257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTA  336 (349)
Q Consensus       257 ~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA  336 (349)
                      +++.+|||+|++.+|           ..||||||+|+|+.++..      ..++++. +..  ++++++||+||.+|.+|
T Consensus        10 ~~~~~iiDvR~~~~~-----------~~~hIpgA~~ip~~~~~~------~~~~~~~-~~~--~~~~~~ivv~c~~g~~s   69 (96)
T cd01529          10 EPGTALLDVRAEDEY-----------AAGHLPGKRSIPGAALVL------RSQELQA-LEA--PGRATRYVLTCDGSLLA   69 (96)
T ss_pred             CCCeEEEeCCCHHHH-----------cCCCCCCcEeCCHHHhcC------CHHHHHH-hhc--CCCCCCEEEEeCChHHH
Confidence            356889999999999           679999999999876532      2344443 432  57889999999999999


Q ss_pred             HHHHHHHHhCcC
Q 018869          337 CILALVLFPVFF  348 (349)
Q Consensus       337 ~~~~~~L~~~g~  348 (349)
                      ..++..|+.+||
T Consensus        70 ~~~~~~l~~~G~   81 (96)
T cd01529          70 RFAAQELLALGG   81 (96)
T ss_pred             HHHHHHHHHcCC
Confidence            999999999998

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.

>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional

Probab=99.41  E-value=5.1e-13  Score=106.67  Aligned_cols=68  Identities=19%  Similarity=0.298  Sum_probs=57.6

Q ss_pred             cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHH
Q 018869          257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTA  336 (349)
Q Consensus       257 ~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA  336 (349)
                      ..+-.|||+|+++||           ..||||||+|+|+.+             +.+.+.+.+.+++++||+||++|.||
T Consensus        18 ~~~~~lIDvR~~~ef-----------~~ghIpGAiniP~~~-------------l~~~l~~l~~~~~~~IVlyC~~G~rS   73 (104)
T PRK10287         18 FAAEHWIDVRVPEQY-----------QQEHVQGAINIPLKE-------------VKERIATAVPDKNDTVKLYCNAGRQS   73 (104)
T ss_pred             cCCCEEEECCCHHHH-----------hcCCCCccEECCHHH-------------HHHHHHhcCCCCCCeEEEEeCCChHH
Confidence            344579999999999           679999999999864             34456655667788999999999999


Q ss_pred             HHHHHHHHhCcC
Q 018869          337 CILALVLFPVFF  348 (349)
Q Consensus       337 ~~~~~~L~~~g~  348 (349)
                      ..++..|.++||
T Consensus        74 ~~aa~~L~~~G~   85 (104)
T PRK10287         74 GQAKEILSEMGY   85 (104)
T ss_pred             HHHHHHHHHcCC
Confidence            999999999998

>cd01521 RHOD_PspE2 Member of the Rhodanese Homology Domain superfamily

Probab=99.40  E-value=3e-13  Score=109.10  Aligned_cols=80  Identities=26%  Similarity=0.336  Sum_probs=65.8

Q ss_pred             cccCHHHHHHHhhc--CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 018869          244 LIWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (349)
Q Consensus       244 ~~i~~~~v~~~~~~--~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~  321 (349)
                      ..++.+++.+.+.+  ++.+|||+|++.+|           ..||||||+|+|+..+..            ..+  .+++
T Consensus         8 ~~~s~~el~~~l~~~~~~~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~l~~------------~~~--~~i~   62 (110)
T cd01521           8 FETDCWDVAIALKNGKPDFVLVDVRSAEAY-----------ARGHVPGAINLPHREICE------------NAT--AKLD   62 (110)
T ss_pred             eecCHHHHHHHHHcCCCCEEEEECCCHHHH-----------hcCCCCCCEeCCHHHhhh------------Hhh--hcCC
Confidence            35788999998865  35789999999999           679999999999866421            112  2588


Q ss_pred             CCCCEEEEcCCh--HHHHHHHHHHHhCcC
Q 018869          322 LEKPVVTACGTG--VTACILALVLFPVFF  348 (349)
Q Consensus       322 ~~~~vivyC~~G--~rA~~~~~~L~~~g~  348 (349)
                      ++++||+||++|  .+|..++..|+++||
T Consensus        63 ~~~~vvvyc~~g~~~~s~~~a~~l~~~G~   91 (110)
T cd01521          63 KEKLFVVYCDGPGCNGATKAALKLAELGF   91 (110)
T ss_pred             CCCeEEEEECCCCCchHHHHHHHHHHcCC
Confidence            999999999998  489999999999997

This CD includes the putative rhodanese-like protein, Psp2, of Yersinia pestis biovar Medievalis and other similar uncharacterized proteins.

>cd00158 RHOD Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein

Probab=99.32  E-value=1.1e-12  Score=100.42  Aligned_cols=72  Identities=22%  Similarity=0.409  Sum_probs=59.9

Q ss_pred             HHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCC
Q 018869          253 RNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGT  332 (349)
Q Consensus       253 ~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~  332 (349)
                      +.+.+++..|||+|++.+|           ..||||||+|+|+..+....             ...+++++++||+||+.
T Consensus         4 ~~~~~~~~~iiD~R~~~~~-----------~~~~i~ga~~~~~~~~~~~~-------------~~~~~~~~~~vv~~c~~   59 (89)
T cd00158           4 ELLDDEDAVLLDVREPEEY-----------AAGHIPGAINIPLSELEERA-------------ALLELDKDKPIVVYCRS   59 (89)
T ss_pred             HHhcCCCeEEEECCCHHHH-----------hccccCCCEecchHHHhhHH-------------HhhccCCCCeEEEEeCC
Confidence            3444567899999999999           67999999999997654321             23367899999999999


Q ss_pred             hHHHHHHHHHHHhCcC
Q 018869          333 GVTACILALVLFPVFF  348 (349)
Q Consensus       333 G~rA~~~~~~L~~~g~  348 (349)
                      |.+|..++..|+..||
T Consensus        60 ~~~a~~~~~~l~~~G~   75 (89)
T cd00158          60 GNRSARAAKLLRKAGG   75 (89)
T ss_pred             CchHHHHHHHHHHhCc
Confidence            9999999999999987

The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.

>PRK01415 hypothetical protein; Validated

Probab=99.31  E-value=4.1e-12  Score=116.08  Aligned_cols=86  Identities=9%  Similarity=0.090  Sum_probs=70.5

Q ss_pred             CccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH-HcCC
Q 018869          242 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE-QEGI  320 (349)
Q Consensus       242 ~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~-~~~i  320 (349)
                      ....++++++.+.+++++.+|||+|++.||           ..||||||+|+|...+.+          +.+... ...+
T Consensus       110 ~g~~i~p~e~~~ll~~~~~vvIDVRn~~E~-----------~~Ghi~gAinip~~~f~e----------~~~~~~~~~~~  168 (247)
T PRK01415        110 KGEYIEPKDWDEFITKQDVIVIDTRNDYEV-----------EVGTFKSAINPNTKTFKQ----------FPAWVQQNQEL  168 (247)
T ss_pred             CccccCHHHHHHHHhCCCcEEEECCCHHHH-----------hcCCcCCCCCCChHHHhh----------hHHHHhhhhhh
Confidence            345689999999999888999999999999           779999999999876532          111111 1136


Q ss_pred             CCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          321 SLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       321 ~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++++|++||.+|.||..++..|++.||
T Consensus       169 ~k~k~Iv~yCtgGiRs~kAa~~L~~~Gf  196 (247)
T PRK01415        169 LKGKKIAMVCTGGIRCEKSTSLLKSIGY  196 (247)
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHcCC
Confidence            7899999999999999999999999998

>cd01531 Acr2p Eukaryotic arsenate resistance proteins are members of the Rhodanese Homology Domain superfamily

Probab=99.31  E-value=4.3e-12  Score=102.75  Aligned_cols=79  Identities=24%  Similarity=0.313  Sum_probs=60.0

Q ss_pred             ccCHHHHHHHhhc--CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 018869          245 IWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (349)
Q Consensus       245 ~i~~~~v~~~~~~--~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~  322 (349)
                      .++.+++.+.+.+  ++.+|||+|++ ||           ..||||||+|+|+..+..         ++.++....++++
T Consensus         3 ~is~~~l~~~~~~~~~~~~iiDvR~~-e~-----------~~~hi~gA~~ip~~~l~~---------~~~~~~~~~~~~~   61 (113)
T cd01531           3 YISPAQLKGWIRNGRPPFQVVDVRDE-DY-----------AGGHIKGSWHYPSTRFKA---------QLNQLVQLLSGSK   61 (113)
T ss_pred             cCCHHHHHHHHHcCCCCEEEEEcCCc-cc-----------CCCcCCCCEecCHHHHhh---------CHHHHHHHHhcCC
Confidence            4788899998875  35789999999 99           679999999999987542         2233333335678


Q ss_pred             CCCEEEEcC-ChHHHHHHHHHHH
Q 018869          323 EKPVVTACG-TGVTACILALVLF  344 (349)
Q Consensus       323 ~~~vivyC~-~G~rA~~~~~~L~  344 (349)
                      +++||+||. +|.|+..++..|.
T Consensus        62 ~~~iv~yC~~~~~r~~~aa~~l~   84 (113)
T cd01531          62 KDTVVFHCALSQVRGPSAARKFL   84 (113)
T ss_pred             CCeEEEEeecCCcchHHHHHHHH
Confidence            899999998 7788877766553

Included in this CD is the Saccharomyces cerevisiae arsenate reductase protein, Acr2p, and other yeast and plant homologs.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=99.30  E-value=6e-12  Score=122.30  Aligned_cols=94  Identities=22%  Similarity=0.341  Sum_probs=74.1

Q ss_pred             cccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCC---CceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIP---GALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        77 lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIP---GAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      .++++++.+++++++.+|||||         +++||+.||||   ||+|+|+..+....           .+.+.+.  .
T Consensus       272 ~~~~~el~~~l~~~~~~lIDVR---------~~~E~~~ghI~~~~gAinIPl~~l~~~~-----------~~~~~l~--~  329 (370)
T PRK05600        272 RTDTTSLIDATLNGSATLLDVR---------EPHEVLLKDLPEGGASLKLPLSAITDDA-----------DILHALS--P  329 (370)
T ss_pred             ccCHHHHHHHHhcCCeEEEECC---------CHHHhhhccCCCCCccEeCcHHHhhcch-----------hhhhhcc--c
Confidence            6899999999987778999999         78999999998   59999998764310           0111111  2


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCc-eeEeCCCHH
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLP  194 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~-V~~L~GG~~  194 (349)
                      +++ ++|||||..|. ++..++..|+..||++ |++|.||+.
T Consensus       330 ~~~-~~Ivv~C~sG~-RS~~Aa~~L~~~G~~~~v~~l~GG~~  369 (370)
T PRK05600        330 IDG-DNVVVYCASGI-RSADFIEKYSHLGHELTLHNLPGGVN  369 (370)
T ss_pred             cCC-CcEEEECCCCh-hHHHHHHHHHHcCCCCceEEeccccC
Confidence            234 48999998876 7999999999999986 999999975

>cd01443 Cdc25_Acr2p Cdc25 enzymes are members of the Rhodanese Homology Domain (RHOD) superfamily

Probab=99.28  E-value=7.1e-12  Score=101.54  Aligned_cols=77  Identities=19%  Similarity=0.278  Sum_probs=55.8

Q ss_pred             ccCHHHHHHHhhcC------CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHc
Q 018869          245 IWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE  318 (349)
Q Consensus       245 ~i~~~~v~~~~~~~------~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~  318 (349)
                      .++.+++++.++++      +.+|||+|++ ||           ..||||||+|+|+..+.+         .+.+.+...
T Consensus         3 ~is~~el~~~l~~~~~~~~~~~~iiDvR~~-ef-----------~~ghipgAi~ip~~~~~~---------~~~~~~~~~   61 (113)
T cd01443           3 YISPEELVALLENSDSNAGKDFVVVDLRRD-DY-----------EGGHIKGSINLPAQSCYQ---------TLPQVYALF   61 (113)
T ss_pred             ccCHHHHHHHHhCCccccCCcEEEEECCch-hc-----------CCCcccCceecchhHHHH---------HHHHHHHHh
Confidence            46788999988764      5789999999 99           679999999999876532         122233321


Q ss_pred             CCCCCCCEEEEcCC-hHHHHHHHHH
Q 018869          319 GISLEKPVVTACGT-GVTACILALV  342 (349)
Q Consensus       319 ~i~~~~~vivyC~~-G~rA~~~~~~  342 (349)
                      ...+.++||+||.+ |.||..++..
T Consensus        62 ~~~~~~~iv~~C~~~g~rs~~a~~~   86 (113)
T cd01443          62 SLAGVKLAIFYCGSSQGRGPRAARW   86 (113)
T ss_pred             hhcCCCEEEEECCCCCcccHHHHHH
Confidence            22456789999997 6787766544

Also included in this CD are eukaryotic arsenate resistance proteins such as Saccharomyces cerevisiae Acr2p and similar proteins. Cdc25 phosphatases activate the cell division kinases throughout the cell cycle progression. Cdc25 phosphatases dephosphorylate phosphotyrosine and phosphothreonine residues, in order to activate their Cdk/cyclin substrates. The Cdc25 and Acr2p RHOD domains have the signature motif (H/YCxxxxxR).

>cd01532 4RHOD_Repeat_1 Member of the Rhodanese Homology Domain superfamily, repeat 1

Probab=99.26  E-value=7.4e-12  Score=97.64  Aligned_cols=70  Identities=19%  Similarity=0.197  Sum_probs=54.6

Q ss_pred             HhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC-CCCCCEEEEcCC
Q 018869          254 NIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI-SLEKPVVTACGT  332 (349)
Q Consensus       254 ~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i-~~~~~vivyC~~  332 (349)
                      .+++++.+|||+|++.||           ..||||||+|+|+..+...            ...  .+ +++++||+||.+
T Consensus         5 ~~~~~~~~liDvR~~~e~-----------~~~hi~ga~~ip~~~~~~~------------~~~--~~~~~~~~ivl~c~~   59 (92)
T cd01532           5 LLAREEIALIDVREEDPF-----------AQSHPLWAANLPLSRLELD------------AWV--RIPRRDTPIVVYGEG   59 (92)
T ss_pred             hhcCCCeEEEECCCHHHH-----------hhCCcccCeeCCHHHHHhh------------hHh--hCCCCCCeEEEEeCC
Confidence            345567899999999999           7799999999998664211            111  13 358899999999


Q ss_pred             hHH--HHHHHHHHHhCcC
Q 018869          333 GVT--ACILALVLFPVFF  348 (349)
Q Consensus       333 G~r--A~~~~~~L~~~g~  348 (349)
                      |.+  |..++..|+..||
T Consensus        60 G~~~~s~~aa~~L~~~G~   77 (92)
T cd01532          60 GGEDLAPRAARRLSELGY   77 (92)
T ss_pred             CCchHHHHHHHHHHHcCc
Confidence            987  6788889999997

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 1st repeat which does not contain the putative catalytic Cys residue.

>COG0607 PspE Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]

Probab=99.24  E-value=1.3e-11  Score=98.81  Aligned_cols=71  Identities=27%  Similarity=0.489  Sum_probs=59.2

Q ss_pred             hhcCCceEEeccCCCcccccCCCCCCCCCccccCC-CcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCCh
Q 018869          255 IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPG-SKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTG  333 (349)
Q Consensus       255 ~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPG-A~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G  333 (349)
                      ....+.+|||+|++.||           ..+|||| ++|+|..++.......             .++++++||+||.+|
T Consensus        16 ~~~~~~~liDvR~~~e~-----------~~~~i~~~~~~ip~~~~~~~~~~~-------------~~~~~~~ivv~C~~G   71 (110)
T COG0607          16 LAGEDAVLLDVREPEEY-----------ERGHIPGAAINIPLSELKAAENLL-------------ELPDDDPIVVYCASG   71 (110)
T ss_pred             hccCCCEEEeccChhHh-----------hhcCCCcceeeeecccchhhhccc-------------ccCCCCeEEEEeCCC
Confidence            34457899999999999           7899999 9999998876532210             046899999999999


Q ss_pred             HHHHHHHHHHHhCcCC
Q 018869          334 VTACILALVLFPVFFL  349 (349)
Q Consensus       334 ~rA~~~~~~L~~~g~~  349 (349)
                      .||..++..|+..||.
T Consensus        72 ~rS~~aa~~L~~~G~~   87 (110)
T COG0607          72 VRSAAAAAALKLAGFT   87 (110)
T ss_pred             CChHHHHHHHHHcCCc
Confidence            9999999999999983

>PRK07411 hypothetical protein; Validated

Probab=99.22  E-value=1.6e-11  Score=120.36  Aligned_cols=85  Identities=16%  Similarity=0.353  Sum_probs=69.0

Q ss_pred             cccCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 018869          244 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (349)
Q Consensus       244 ~~i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~  321 (349)
                      ..++.+++.+.++++  +.+|||+|++.||           ..||||||+|+|+.++....    ..+++    .+  +.
T Consensus       282 ~~Is~~el~~~l~~~~~~~vlIDVR~~~E~-----------~~ghIpGAiniP~~~l~~~~----~~~~l----~~--l~  340 (390)
T PRK07411        282 PEMTVTELKALLDSGADDFVLIDVRNPNEY-----------EIARIPGSVLVPLPDIENGP----GVEKV----KE--LL  340 (390)
T ss_pred             CccCHHHHHHHHhCCCCCeEEEECCCHHHh-----------ccCcCCCCEEccHHHhhccc----chHHH----hh--cC
Confidence            358999999988654  4789999999999           67999999999998875421    12222    22  56


Q ss_pred             CCCCEEEEcCChHHHHHHHHHHHhCcCC
Q 018869          322 LEKPVVTACGTGVTACILALVLFPVFFL  349 (349)
Q Consensus       322 ~~~~vivyC~~G~rA~~~~~~L~~~g~~  349 (349)
                      ++++||+||.+|.||..++..|+.+||.
T Consensus       341 ~d~~IVvyC~~G~RS~~aa~~L~~~G~~  368 (390)
T PRK07411        341 NGHRLIAHCKMGGRSAKALGILKEAGIE  368 (390)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHHcCCC
Confidence            7899999999999999999999999983

>PRK05320 rhodanese superfamily protein; Provisional

Probab=99.21  E-value=2.2e-11  Score=112.60  Aligned_cols=85  Identities=18%  Similarity=0.238  Sum_probs=67.1

Q ss_pred             cccCHHHHHHHhhcC------CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 018869          244 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (349)
Q Consensus       244 ~~i~~~~v~~~~~~~------~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~  317 (349)
                      ..++.+++.+.+++.      +.+|||+|++.||           ..||||||+|+|..++.+-      ++.|++....
T Consensus       110 ~~is~~el~~~l~~~~~~~~~~~vlIDVR~~~E~-----------~~Ghi~GAiniPl~~f~~~------~~~l~~~~~~  172 (257)
T PRK05320        110 PSVDAATLKRWLDQGHDDAGRPVVMLDTRNAFEV-----------DVGTFDGALDYRIDKFTEF------PEALAAHRAD  172 (257)
T ss_pred             ceeCHHHHHHHHhccccccCCCeEEEECCCHHHH-----------ccCccCCCEeCChhHhhhh------HHHHHhhhhh
Confidence            357888988877642      4789999999999           7799999999999766321      1223333322


Q ss_pred             cCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          318 EGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       318 ~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                        + ++++||+||.+|.|+..++..|+..||
T Consensus       173 --~-kdk~IvvyC~~G~Rs~~Aa~~L~~~Gf  200 (257)
T PRK05320        173 --L-AGKTVVSFCTGGIRCEKAAIHMQEVGI  200 (257)
T ss_pred             --c-CCCeEEEECCCCHHHHHHHHHHHHcCC
Confidence              3 789999999999999999999999998

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.20  E-value=2.9e-11  Score=118.14  Aligned_cols=79  Identities=19%  Similarity=0.246  Sum_probs=66.3

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .++.+++.+.+++ +.+|||+|++.||           ..||||||+|+|+..+             ++.+....+++++
T Consensus         4 ~is~~el~~~l~~-~~~ivDvR~~~e~-----------~~ghIpgAi~ip~~~l-------------~~~~~~~~~~~~~   58 (376)
T PRK08762          4 EISPAEARARAAQ-GAVLIDVREAHER-----------ASGQAEGALRIPRGFL-------------ELRIETHLPDRDR   58 (376)
T ss_pred             eeCHHHHHHHHhC-CCEEEECCCHHHH-----------hCCcCCCCEECCHHHH-------------HHHHhhhcCCCCC
Confidence            4788899988865 4889999999999           7799999999998543             3334443457899


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcC
Q 018869          325 PVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +||+||++|.||..++..|+..||
T Consensus        59 ~IvvyC~~G~rs~~aa~~L~~~G~   82 (376)
T PRK08762         59 EIVLICASGTRSAHAAATLRELGY   82 (376)
T ss_pred             eEEEEcCCCcHHHHHHHHHHHcCC
Confidence            999999999999999999999998

>KOG1529 consensus Mercaptopyruvate sulfurtransferase/thiosulfate sulfurtransferase [Defense mechanisms]

Probab=99.19  E-value=6.1e-11  Score=108.44  Aligned_cols=115  Identities=24%  Similarity=0.352  Sum_probs=90.0

Q ss_pred             ccHHHHHHh-cCCCCcEEEEeccC--CCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           78 VSVDWLHAN-LREPDLKVLDASWY--MPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        78 Is~~~L~~~-l~~~~~~iIDvR~~--~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      +..+++..+ +..+++.+||+|..  .....+++...+..||||||+|||+..+.++..    .+.+++++...+...|+
T Consensus       158 ~~~edi~~n~~~~~~~~~~DaRs~grF~Gt~p~~~~~~~ggHIpGa~n~P~~~~~~~~g----~~k~~edl~~~f~~~~l  233 (286)
T KOG1529|consen  158 ATLEDIPFNNLATKNFQYLDARSKGRFDGTEPEPRSGATGGHIPGAINFPFDEVLDPDG----FIKPAEDLKHLFAQKGL  233 (286)
T ss_pred             HHHhhccccccccccceeeeccccccccccCCCCcccCcCccCCCcccCChHHhccccc----ccCCHHHHHHHHHhcCc
Confidence            333443333 34457999999942  333334456788899999999999998776532    34448899999999999


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      ..+++||+-|..|. .|+..+-.|...| .+|++|||+|..|.-
T Consensus       234 ~~~~p~~~sC~~Gi-sa~~i~~al~r~g-~~~~lYdGS~~Ew~~  275 (286)
T KOG1529|consen  234 KLSKPVIVSCGTGI-SASIIALALERSG-PDAKLYDGSWTEWAL  275 (286)
T ss_pred             ccCCCEEEeeccch-hHHHHHHHHHhcC-CCcceecccHHHHhh
Confidence            99999999998876 7888999999999 789999999999974

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=99.16  E-value=4.6e-11  Score=117.21  Aligned_cols=83  Identities=23%  Similarity=0.407  Sum_probs=69.3

Q ss_pred             CccccCHHHHHHHhhcC-CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 018869          242 PHLIWTLEQVKRNIEEG-TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (349)
Q Consensus       242 ~~~~i~~~~v~~~~~~~-~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i  320 (349)
                      ....++.+++.+.++++ +.+|||+|++.||           ..||||||+|+|+..+...       +.    +.  .+
T Consensus       285 ~~~~Is~~el~~~l~~~~~~~lIDvR~~~ef-----------~~ghIpGAinip~~~l~~~-------~~----~~--~l  340 (392)
T PRK07878        285 AGSTITPRELKEWLDSGKKIALIDVREPVEW-----------DIVHIPGAQLIPKSEILSG-------EA----LA--KL  340 (392)
T ss_pred             CCCccCHHHHHHHHhCCCCeEEEECCCHHHH-----------hcCCCCCCEEcChHHhcch-------hH----Hh--hC
Confidence            34578999999988754 4789999999999           7899999999999876431       11    22  37


Q ss_pred             CCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          321 SLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       321 ~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++++||+||++|.||..++..|++.||
T Consensus       341 ~~d~~iVvyC~~G~rS~~aa~~L~~~G~  368 (392)
T PRK07878        341 PQDRTIVLYCKTGVRSAEALAALKKAGF  368 (392)
T ss_pred             CCCCcEEEEcCCChHHHHHHHHHHHcCC
Confidence            8899999999999999999999999998

>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4

Probab=99.14  E-value=8.1e-11  Score=99.72  Aligned_cols=64  Identities=22%  Similarity=0.359  Sum_probs=55.3

Q ss_pred             CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHHHH
Q 018869          259 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACI  338 (349)
Q Consensus       259 ~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA~~  338 (349)
                      +..|||+|++.+|           +.||||||+|+|.             ++|.+.+.+  ++++++||+||.+|.+|..
T Consensus        11 ~~~ivDvR~~~e~-----------~~gHIpgAi~~~~-------------~~l~~~l~~--l~~~~~vVv~c~~g~~a~~   64 (145)
T cd01535          11 QTAVVDVTASANY-----------VKRHIPGAWWVLR-------------AQLAQALEK--LPAAERYVLTCGSSLLARF   64 (145)
T ss_pred             CeEEEECCCHHHH-----------HcCCCCCceeCCH-------------HHHHHHHHh--cCCCCCEEEEeCCChHHHH
Confidence            4789999999999           7899999999864             455666665  5678999999999999999


Q ss_pred             HHHHHHhCcC
Q 018869          339 LALVLFPVFF  348 (349)
Q Consensus       339 ~~~~L~~~g~  348 (349)
                      ++..|+..||
T Consensus        65 aa~~L~~~G~   74 (145)
T cd01535          65 AAADLAALTV   74 (145)
T ss_pred             HHHHHHHcCC
Confidence            9999998887

This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=99.10  E-value=9.6e-11  Score=113.90  Aligned_cols=83  Identities=16%  Similarity=0.211  Sum_probs=66.4

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccC---CCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVP---GSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIP---GA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~  321 (349)
                      .++.+++.+.+++++.+|||+|++.||           ..||||   ||+|+|+.++.+..       +..+.+.  .++
T Consensus       272 ~~~~~el~~~l~~~~~~lIDVR~~~E~-----------~~ghI~~~~gAinIPl~~l~~~~-------~~~~~l~--~~~  331 (370)
T PRK05600        272 RTDTTSLIDATLNGSATLLDVREPHEV-----------LLKDLPEGGASLKLPLSAITDDA-------DILHALS--PID  331 (370)
T ss_pred             ccCHHHHHHHHhcCCeEEEECCCHHHh-----------hhccCCCCCccEeCcHHHhhcch-------hhhhhcc--ccC
Confidence            688999999888777889999999999           779998   59999998774321       0111122  244


Q ss_pred             CCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          322 LEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       322 ~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++ +||+||.+|.||..++..|+..||
T Consensus       332 ~~-~Ivv~C~sG~RS~~Aa~~L~~~G~  357 (370)
T PRK05600        332 GD-NVVVYCASGIRSADFIEKYSHLGH  357 (370)
T ss_pred             CC-cEEEECCCChhHHHHHHHHHHcCC
Confidence            44 999999999999999999999998

>PRK11784 tRNA 2-selenouridine synthase; Provisional

Probab=99.10  E-value=1.7e-10  Score=110.92  Aligned_cols=88  Identities=17%  Similarity=0.266  Sum_probs=61.0

Q ss_pred             HHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCC---------CC---------CCCCHH
Q 018869          248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA---------SQ---------TLLPAD  309 (349)
Q Consensus       248 ~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~---------~~---------~l~~~~  309 (349)
                      ..++.+.+. ++..|||||++.||           ..||||||+|+|+.+....         .+         .+.+ .
T Consensus         5 ~~~~~~~~~-~~~~lIDVRsp~Ef-----------~~ghIpgAiniPl~~~~er~~vgt~Ykq~g~~~a~~lg~~lv~-~   71 (345)
T PRK11784          5 AQDFRALFL-NDTPLIDVRSPIEF-----------AEGHIPGAINLPLLNDEERAEVGTCYKQQGQFAAIALGHALVA-G   71 (345)
T ss_pred             HHHHHHHHh-CCCEEEECCCHHHH-----------hcCCCCCeeeCCCCChhHHHhhchhhcccCHHHHHHhhhhhcc-h
Confidence            345555543 46799999999999           7899999999998543210         01         1111 2


Q ss_pred             HHHHHHHHc--CC-CCCCCEEEEc-CChHHHHHHHHHHHhCcC
Q 018869          310 ELKKRFEQE--GI-SLEKPVVTAC-GTGVTACILALVLFPVFF  348 (349)
Q Consensus       310 el~~~~~~~--~i-~~~~~vivyC-~~G~rA~~~~~~L~~~g~  348 (349)
                      ++.+.+.+.  .+ .++++||+|| .+|.||+.++..|+..||
T Consensus        72 ~l~~~~~~~~~~~~~~~~~ivvyC~rgG~RS~~aa~~L~~~G~  114 (345)
T PRK11784         72 NIAAHREEAWADFPRANPRGLLYCWRGGLRSGSVQQWLKEAGI  114 (345)
T ss_pred             hHHHHHHHHHHhcccCCCeEEEEECCCChHHHHHHHHHHHcCC
Confidence            333332221  12 3788999999 589999999999999997

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=99.02  E-value=2.6e-10  Score=110.44  Aligned_cols=80  Identities=19%  Similarity=0.345  Sum_probs=65.1

Q ss_pred             ccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 018869          243 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (349)
Q Consensus       243 ~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~  322 (349)
                      ...++.+++.+..  .+.+|||+|+++||           ..||||||+|+|+.++....             ....+++
T Consensus       260 ~~~i~~~~~~~~~--~~~~IIDVR~~~ef-----------~~ghIpgAinip~~~l~~~~-------------~~~~~~~  313 (355)
T PRK05597        260 GEVLDVPRVSALP--DGVTLIDVREPSEF-----------AAYSIPGAHNVPLSAIREGA-------------NPPSVSA  313 (355)
T ss_pred             ccccCHHHHHhcc--CCCEEEECCCHHHH-----------ccCcCCCCEEeCHHHhhhcc-------------ccccCCC
Confidence            3467888888543  35789999999999           77999999999998765321             1113678


Q ss_pred             CCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          323 EKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       323 ~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++||+||++|.||..++..|+.+||
T Consensus       314 ~~~IvvyC~~G~rS~~Aa~~L~~~G~  339 (355)
T PRK05597        314 GDEVVVYCAAGVRSAQAVAILERAGY  339 (355)
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCC
Confidence            89999999999999999999999998

>TIGR03167 tRNA_sel_U_synt tRNA 2-selenouridine synthase

Probab=98.97  E-value=7.5e-10  Score=105.03  Aligned_cols=79  Identities=27%  Similarity=0.298  Sum_probs=54.6

Q ss_pred             CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCC--CCC-CC--C------------HHHHHHHHHHc--C
Q 018869          259 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--SQT-LL--P------------ADELKKRFEQE--G  319 (349)
Q Consensus       259 ~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~--~~~-l~--~------------~~el~~~~~~~--~  319 (349)
                      ...|||||++.||           ..||||||+|+|.......  -++ ++  +            ...|.+.+.+.  -
T Consensus         2 ~~~liDVRsp~Ef-----------~~ghipgAiniPl~~~~er~~vgt~ykq~g~~~A~~lg~~~v~~~l~~~i~~~~~~   70 (311)
T TIGR03167         2 FDPLIDVRSPAEF-----------AEGHLPGAINLPLLNDEERAEVGTLYKQVGPFAAIKLGLALVSPNLAAHVEQWRAF   70 (311)
T ss_pred             CCEEEECCCHHHH-----------hcCCCcCCEecccccchhhhhhhhhhhcccHHHHHHHhHhhhhHHHHHHHHHHHhh
Confidence            3579999999999           7899999999998532110  011 11  0            11333433331  2


Q ss_pred             CCCCCCEEEEcC-ChHHHHHHHHHHHhCcC
Q 018869          320 ISLEKPVVTACG-TGVTACILALVLFPVFF  348 (349)
Q Consensus       320 i~~~~~vivyC~-~G~rA~~~~~~L~~~g~  348 (349)
                      .++++.||+||. +|.||..++.+|+.+||
T Consensus        71 ~~~~~~vvvyC~~gG~RS~~aa~~L~~~G~  100 (311)
T TIGR03167        71 ADGPPQPLLYCWRGGMRSGSLAWLLAQIGF  100 (311)
T ss_pred             cCCCCcEEEEECCCChHHHHHHHHHHHcCC
Confidence            344556999995 89999999999999998

The Escherichia coli YbbB protein was shown to encode a selenophosphate-dependent tRNA 2-selenouridine synthase, essential for modification of some tRNAs to replace a sulfur atom with selenium. This enzyme works with SelD, the selenium donor protein, which also acts in selenocysteine incorporation. Although the members of this protein family show a fairly deep split, sequences from both sides of the split are supported by co-occurence with, and often proximity to, the selD gene.

>cd01446 DSP_MapKP N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase

Probab=98.97  E-value=6.4e-10  Score=92.50  Aligned_cols=76  Identities=20%  Similarity=0.243  Sum_probs=56.4

Q ss_pred             cCHHHHHHHhhc--CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCC---CC-----CCCHHHHHHHH
Q 018869          246 WTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---QT-----LLPADELKKRF  315 (349)
Q Consensus       246 i~~~~v~~~~~~--~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~---~~-----l~~~~el~~~~  315 (349)
                      |+.+++.+.++.  .+.+|||+|+..+|           ..||||||+|+|+..+....   +.     +.+.++.++.+
T Consensus         2 is~~~l~~~l~~~~~~~~iiDvR~~~~~-----------~~~hI~~ai~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   70 (132)
T cd01446           2 IDCAWLAALLREGGERLLLLDCRPFLEY-----------SSSHIRGAVNVCCPTILRRRLQGGKILLQQLLSCPEDRDRL   70 (132)
T ss_pred             cCHHHHHHHHhcCCCCEEEEECCCHHHH-----------hhCcccCcEecChHHHHHHhhcccchhhhhhcCCHHHHHHH
Confidence            678899998875  46899999999999           78999999999998754211   10     22334455555


Q ss_pred             HHcCCCCCCCEEEEcCChHH
Q 018869          316 EQEGISLEKPVVTACGTGVT  335 (349)
Q Consensus       316 ~~~~i~~~~~vivyC~~G~r  335 (349)
                      ...   .+++||+||.+|.+
T Consensus        71 ~~~---~~~~VVvYd~~~~~   87 (132)
T cd01446          71 RRG---ESLAVVVYDESSSD   87 (132)
T ss_pred             hcC---CCCeEEEEeCCCcc
Confidence            542   67899999999875

This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by inducing a conformational change. This domain has homology to the Rhodanese Homology Domain.

>COG1054 Predicted sulfurtransferase [General function prediction only]

Probab=98.96  E-value=1.5e-09  Score=99.83  Aligned_cols=102  Identities=21%  Similarity=0.303  Sum_probs=80.1

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      -...|+|++..+++.++++++||+|         ..-||+.||-.||++.+...+.+.          ++.+++.+..+ 
T Consensus       111 vG~yl~p~~wn~~l~D~~~vviDtR---------N~YE~~iG~F~gAv~p~~~tFref----------P~~v~~~~~~~-  170 (308)
T COG1054         111 VGTYLSPKDWNELLSDPDVVVIDTR---------NDYEVAIGHFEGAVEPDIETFREF----------PAWVEENLDLL-  170 (308)
T ss_pred             ccCccCHHHHHHHhcCCCeEEEEcC---------cceeEeeeeecCccCCChhhhhhh----------HHHHHHHHHhc-
Confidence            3567999999999999999999999         466899999999999998876542          23444544443 


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                        ++++||.||-+|. +=..+...|+..||++|+.|+||+-.+..
T Consensus       171 --~~KkVvmyCTGGI-RCEKas~~m~~~GF~eVyhL~GGIl~Y~e  212 (308)
T COG1054         171 --KDKKVVMYCTGGI-RCEKASAWMKENGFKEVYHLEGGILKYLE  212 (308)
T ss_pred             --cCCcEEEEcCCce-eehhhHHHHHHhcchhhhcccchHHHHhh
Confidence              5679999987666 44444445667899999999999988864

>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.96  E-value=9.3e-10  Score=102.73  Aligned_cols=99  Identities=17%  Similarity=0.197  Sum_probs=70.9

Q ss_pred             CCcccHHHHHHhcCCC------CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHH
Q 018869           75 EPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~------~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~  148 (349)
                      -..||++.|+.++...      ..+|||||         -+-||..|||+||+|+...+...                ..
T Consensus       155 ~k~Is~etl~~ll~~~~~~~~~~~~iiDcR---------~pyEY~GGHIkgavnl~~~~~~~----------------~~  209 (325)
T KOG3772|consen  155 LKYISPETLKGLLQGKFSDFFDKFIIIDCR---------YPYEYEGGHIKGAVNLYSKELLQ----------------DF  209 (325)
T ss_pred             ccccCHHHHHHHHHhccccceeeEEEEEeC---------CcccccCcccccceecccHhhhh----------------hh
Confidence            4579999999988641      26799999         45699999999999998754221                11


Q ss_pred             HHHc-CC---CCCCcEEEECCCCcchHHHHHHHHHH------------cCCCceeEeCCCHHHHHh
Q 018869          149 VSAL-GL---ENKDGLVVYDGKGIFSAARVWWMFRV------------FGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       149 ~~~~-gi---~~~~~VVvy~~~g~~~a~r~~~~L~~------------~G~~~V~~L~GG~~~W~~  198 (349)
                      +... +.   .+...+||||.....++.+++..|+.            +-|..+++|+||+.+|..
T Consensus       210 f~~~~~~~~~~~~~i~IFhCefSq~RGP~mA~~lr~iDR~r~~~~yp~l~ypE~yiL~gGYk~ff~  275 (325)
T KOG3772|consen  210 FLLKDGVPSGSKRVILIFHCEFSQERGPKMARHLRNIDRDRNSNDYPKLSYPELYILDGGYKEFFS  275 (325)
T ss_pred             hccccccccccCceeEEEEeeeccccCHHHHHHHHHhhhhhhcccCcccccchheeecccHHHHHH
Confidence            1111 11   12346788887666678888888883            334579999999999974

>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional

Probab=98.86  E-value=7.2e-09  Score=104.37  Aligned_cols=73  Identities=15%  Similarity=0.168  Sum_probs=60.5

Q ss_pred             CCcEEEEeccCCCCCCCCChhhhhcCCCCC----ceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEECC
Q 018869           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPG----ALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG  165 (349)
Q Consensus        90 ~~~~iIDvR~~~~~~~~~~~~~y~~GHIPG----Ai~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVvy~~  165 (349)
                      ++.+|||+|         ++++|..|||||    |+|+|+..+.                 ..+..  +++++++|+||.
T Consensus       406 ~~~~lIDVR---------~~~E~~~~hI~g~~~~a~niP~~~l~-----------------~~~~~--l~~~~~iivyC~  457 (482)
T PRK01269        406 PDDVIIDIR---------SPDEQEDKPLKLEGVEVKSLPFYKLS-----------------TQFGD--LDQSKTYLLYCD  457 (482)
T ss_pred             CCCEEEECC---------CHHHHhcCCCCCCCceEEECCHHHHH-----------------HHHhh--cCCCCeEEEECC
Confidence            367899999         789999999999    9999987542                 22222  467789999998


Q ss_pred             CCcchHHHHHHHHHHcCCCceeEeCC
Q 018869          166 KGIFSAARVWWMFRVFGHDRVWVLDG  191 (349)
Q Consensus       166 ~g~~~a~r~~~~L~~~G~~~V~~L~G  191 (349)
                      .|. +|..++..|+.+||+||++|.+
T Consensus       458 ~G~-rS~~aa~~L~~~G~~nv~~y~~  482 (482)
T PRK01269        458 RGV-MSRLQALYLREQGFSNVKVYRP  482 (482)
T ss_pred             CCH-HHHHHHHHHHHcCCccEEecCC
Confidence            876 7999999999999999998853

>PRK01269 tRNA s(4)U8 sulfurtransferase; Provisional

Probab=98.85  E-value=3e-09  Score=107.09  Aligned_cols=65  Identities=23%  Similarity=0.305  Sum_probs=56.2

Q ss_pred             CCceEEeccCCCcccccCCCCCCCCCccccCC----CcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCCh
Q 018869          258 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPG----SKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTG  333 (349)
Q Consensus       258 ~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPG----A~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G  333 (349)
                      .+.+|||+|+++||           ..|||||    |+|+|+.++.             +.+.  .++++++||+||++|
T Consensus       406 ~~~~lIDVR~~~E~-----------~~~hI~g~~~~a~niP~~~l~-------------~~~~--~l~~~~~iivyC~~G  459 (482)
T PRK01269        406 PDDVIIDIRSPDEQ-----------EDKPLKLEGVEVKSLPFYKLS-------------TQFG--DLDQSKTYLLYCDRG  459 (482)
T ss_pred             CCCEEEECCCHHHH-----------hcCCCCCCCceEEECCHHHHH-------------HHHh--hcCCCCeEEEECCCC
Confidence            46789999999999           6799999    9999987653             2233  267889999999999


Q ss_pred             HHHHHHHHHHHhCcC
Q 018869          334 VTACILALVLFPVFF  348 (349)
Q Consensus       334 ~rA~~~~~~L~~~g~  348 (349)
                      .||..++..|+..||
T Consensus       460 ~rS~~aa~~L~~~G~  474 (482)
T PRK01269        460 VMSRLQALYLREQGF  474 (482)
T ss_pred             HHHHHHHHHHHHcCC
Confidence            999999999999998

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=98.81  E-value=6.8e-09  Score=97.03  Aligned_cols=103  Identities=23%  Similarity=0.307  Sum_probs=79.4

Q ss_pred             CCCcccHHHHHHhcCC-CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           74 KEPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~-~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      +.--||..++++.+++ ...++||||         |.-+|+..|+|+|+|||+.++.....            ++..+.+
T Consensus       315 ~~~Rvsv~d~k~il~~~~~h~llDvR---------p~~~~eI~~lP~avNIPL~~l~~~~~------------~~~~~~~  373 (427)
T KOG2017|consen  315 PDERVSVTDYKRILDSGAKHLLLDVR---------PSHEYEICRLPEAVNIPLKELRSRSG------------KKLQGDL  373 (427)
T ss_pred             hhhcccHHHHHHHHhcCCCeEEEecc---------CcceEEEEecccccccchhhhhhhhh------------hhhcccc
Confidence            4557999999999987 568999999         88899999999999999988765421            1111111


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCC-ceeEeCCCHHHHHhC
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHD-RVWVLDGGLPRWRAS  199 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~-~V~~L~GG~~~W~~~  199 (349)
                       -....+|+|.|..|+ .+.++.|+|+...++ +|+-+-||+.+|...
T Consensus       374 -~~~~~~I~ViCrrGN-dSQ~Av~~Lre~~~~~~vrDvigGl~~w~~~  419 (427)
T KOG2017|consen  374 -NTESKDIFVICRRGN-DSQRAVRILREKFPDSSVRDVIGGLKAWAAK  419 (427)
T ss_pred             -cccCCCEEEEeCCCC-chHHHHHHHHhhCCchhhhhhhhHHHHHHHh
Confidence             123466999999887 799999999876654 677788999999864

>COG1054 Predicted sulfurtransferase [General function prediction only]

Probab=98.33  E-value=1.1e-06  Score=81.27  Aligned_cols=86  Identities=13%  Similarity=0.159  Sum_probs=70.2

Q ss_pred             ccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 018869          243 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (349)
Q Consensus       243 ~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~  322 (349)
                      ...++++++.+.+.++++++||+|..=||           ..||..||++.+...+-+-      ++-+++...   .-+
T Consensus       112 G~yl~p~~wn~~l~D~~~vviDtRN~YE~-----------~iG~F~gAv~p~~~tFref------P~~v~~~~~---~~~  171 (308)
T COG1054         112 GTYLSPKDWNELLSDPDVVVIDTRNDYEV-----------AIGHFEGAVEPDIETFREF------PAWVEENLD---LLK  171 (308)
T ss_pred             cCccCHHHHHHHhcCCCeEEEEcCcceeE-----------eeeeecCccCCChhhhhhh------HHHHHHHHH---hcc
Confidence            45688999999999999999999999998           7899999999998766431      233344333   345


Q ss_pred             CCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          323 EKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       323 ~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +|+|+.||.+|+|.--+..+|...||
T Consensus       172 ~KkVvmyCTGGIRCEKas~~m~~~GF  197 (308)
T COG1054         172 DKKVVMYCTGGIRCEKASAWMKENGF  197 (308)
T ss_pred             CCcEEEEcCCceeehhhHHHHHHhcc
Confidence            77999999999999999999999898

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=98.28  E-value=1.3e-06  Score=82.06  Aligned_cols=87  Identities=18%  Similarity=0.300  Sum_probs=68.5

Q ss_pred             CCccccCHHHHHHHhhc-CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcC
Q 018869          241 QPHLIWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  319 (349)
Q Consensus       241 ~~~~~i~~~~v~~~~~~-~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~  319 (349)
                      .++.+++..|.+..+++ ..+.+||+|++.||           ..-|+|+|+|||..++.+..+     +++...+    
T Consensus       314 ~~~~Rvsv~d~k~il~~~~~h~llDvRp~~~~-----------eI~~lP~avNIPL~~l~~~~~-----~~~~~~~----  373 (427)
T KOG2017|consen  314 EPDERVSVTDYKRILDSGAKHLLLDVRPSHEY-----------EICRLPEAVNIPLKELRSRSG-----KKLQGDL----  373 (427)
T ss_pred             ChhhcccHHHHHHHHhcCCCeEEEeccCcceE-----------EEEecccccccchhhhhhhhh-----hhhcccc----
Confidence            45668999999998876 56889999999999           678999999999988866433     1111111    


Q ss_pred             CCCCCCEEEEcCChHHHHHHHHHHHhCc
Q 018869          320 ISLEKPVVTACGTGVTACILALVLFPVF  347 (349)
Q Consensus       320 i~~~~~vivyC~~G~rA~~~~~~L~~~g  347 (349)
                      -...++|+|.|..|..|..+...|++.+
T Consensus       374 ~~~~~~I~ViCrrGNdSQ~Av~~Lre~~  401 (427)
T KOG2017|consen  374 NTESKDIFVICRRGNDSQRAVRILREKF  401 (427)
T ss_pred             cccCCCEEEEeCCCCchHHHHHHHHhhC
Confidence            1345689999999999999999998753

>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]

Probab=98.22  E-value=2.6e-06  Score=78.95  Aligned_cols=98  Identities=19%  Similarity=0.201  Sum_probs=73.2

Q ss_pred             CCcccHHHHHHhcCCC------CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHH
Q 018869           75 EPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~------~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~  148 (349)
                      -+-|+++.|+..++..      +.+|||||         =.-||..|||-.||||.-.+                ++.-.
T Consensus       241 ~~RIs~etlk~vl~g~~~~~f~kCiIIDCR---------FeYEY~GGHIinaVNi~s~~----------------~l~~~  295 (427)
T COG5105         241 IQRISVETLKQVLEGMYNIDFLKCIIIDCR---------FEYEYRGGHIINAVNISSTK----------------KLGLL  295 (427)
T ss_pred             hhhcCHHHHHHHHhchhhhhhhceeEEeec---------ceeeecCceeeeeeecchHH----------------HHHHH
Confidence            4579999999988642      47899999         34589999999999997542                34444


Q ss_pred             HHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcC------------CCceeEeCCCHHHHH
Q 018869          149 VSALGLENKDGLVVYDGKGIFSAARVWWMFRVFG------------HDRVWVLDGGLPRWR  197 (349)
Q Consensus       149 ~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G------------~~~V~~L~GG~~~W~  197 (349)
                      +....++.-.-+|+.|.-...+|.+++..|+..-            |..|++|+||+.+.-
T Consensus       296 F~hkplThp~aLifHCEfSshRaP~LA~HlRN~DR~~N~dhYP~L~yPevyIl~GGYk~fy  356 (427)
T COG5105         296 FRHKPLTHPRALIFHCEFSSHRAPRLAQHLRNMDRMKNPDHYPLLTYPEVYILEGGYKKFY  356 (427)
T ss_pred             HHhccccCceeEEEEeecccccchhHHHHHhhhhhhcCcccCcccccceEEEecCcHHHHh
Confidence            4433344456688889877778999999887532            357999999998875

>KOG3772 consensus M-phase inducer phosphatase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.76  E-value=4e-05  Score=72.06  Aligned_cols=78  Identities=17%  Similarity=0.268  Sum_probs=53.7

Q ss_pred             ccCHHHHHHHhhc------CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHc
Q 018869          245 IWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE  318 (349)
Q Consensus       245 ~i~~~~v~~~~~~------~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~  318 (349)
                      .|+.+.++.++..      ..++|||.|-+-||           ..|||+||+|++..+.+..            .|-..
T Consensus       157 ~Is~etl~~ll~~~~~~~~~~~~iiDcR~pyEY-----------~GGHIkgavnl~~~~~~~~------------~f~~~  213 (325)
T KOG3772|consen  157 YISPETLKGLLQGKFSDFFDKFIIIDCRYPYEY-----------EGGHIKGAVNLYSKELLQD------------FFLLK  213 (325)
T ss_pred             ccCHHHHHHHHHhccccceeeEEEEEeCCcccc-----------cCcccccceecccHhhhhh------------hhccc
Confidence            6888999888753      23779999999999           5599999999997665432            22211


Q ss_pred             -CCC---CCCCEEEEcC-ChHHHHHHHHHHHh
Q 018869          319 -GIS---LEKPVVTACG-TGVTACILALVLFP  345 (349)
Q Consensus       319 -~i~---~~~~vivyC~-~G~rA~~~~~~L~~  345 (349)
                       +..   ...-+|+||- +-.|+=-++..|+.
T Consensus       214 ~~~~~~~~~~i~IFhCefSq~RGP~mA~~lr~  245 (325)
T KOG3772|consen  214 DGVPSGSKRVILIFHCEFSQERGPKMARHLRN  245 (325)
T ss_pred             cccccccCceeEEEEeeeccccCHHHHHHHHH
Confidence             122   2346899995 55666666666653

>COG2603 Predicted ATPase [General function prediction only]

Probab=96.28  E-value=0.0059  Score=56.59  Aligned_cols=95  Identities=16%  Similarity=0.132  Sum_probs=52.5

Q ss_pred             CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCccccccc---CCCCCC-CCCCH--------------HHHHHHHHH
Q 018869           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR---TTNLPH-MLPSE--------------EAFAAAVSA  151 (349)
Q Consensus        90 ~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~---~~~~~~-~lp~~--------------~~~~~~~~~  151 (349)
                      .+.-+||||         .+-+|..||.|+++|+|.-.=...   ...+.. ..+..              +.++.+...
T Consensus        14 ~~~~lid~r---------ap~ef~~g~~~ia~nl~~~ndder~~Igt~yKk~~~~~a~alg~~~vcG~i~~~~l~ask~f   84 (334)
T COG2603          14 ADTPLIDVR---------APIEFENGAMPIAINLPLMNDDERQEIGTCYKKQGQDAAKALGHALVCGEIRQQRLEASKAF   84 (334)
T ss_pred             cCCceeecc---------chHHHhcccchhhhccccccchHHHHHHHHHhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            367899999         788999999999999987320000   000000 11100              111111111


Q ss_pred             cCCCCCCcEEEECCCCcchHHHHHHHH-HHcCCCceeEeCCCHHHHH
Q 018869          152 LGLENKDGLVVYDGKGIFSAARVWWMF-RVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~r~~~~L-~~~G~~~V~~L~GG~~~W~  197 (349)
                      .   -+.++-++|..|+.++-.....| ...|++ +--..||+.+..
T Consensus        85 ~---e~~~~Gi~c~rgg~rsk~v~~~l~~~~g~~-~~r~iGGeKalr  127 (334)
T COG2603          85 Q---EENPVGILCARGGLRSKIVQKWLGYAAGID-YPRVIGGEKALR  127 (334)
T ss_pred             H---HhCCcceeeccccchhHHHHHHHHHHHHhh-hhhhhchHHHHH
Confidence            1   23455566777776776666556 556664 444557766643

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=96.25  E-value=0.034  Score=46.34  Aligned_cols=86  Identities=14%  Similarity=0.236  Sum_probs=45.7

Q ss_pred             cCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCC--cccCcccccCCCCCCCCHH---HHHHHHHHcCC
Q 018869          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS--KCIPFPQMLDASQTLLPAD---ELKKRFEQEGI  320 (349)
Q Consensus       246 i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA--~~ip~~~l~~~~~~l~~~~---el~~~~~~~~i  320 (349)
                      ++.+++..+.+.+=..|||-|+..|-.+...... ......-+|-  +++|+..     +. .+.+   .+.+.|.    
T Consensus        15 lt~~d~~~L~~~GiktVIdlR~~~E~~~~p~~~~-~~~~a~~~gl~y~~iPv~~-----~~-~~~~~v~~f~~~~~----   83 (135)
T TIGR01244        15 LTKADAAQAAQLGFKTVINNRPDREEESQPDFAQ-IKAAAEAAGVTYHHQPVTA-----GD-ITPDDVETFRAAIG----   83 (135)
T ss_pred             CCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHH-HHHHHHHCCCeEEEeecCC-----CC-CCHHHHHHHHHHHH----
Confidence            5667776654434456999999888644211000 0000000121  2343321     11 2333   3444454    


Q ss_pred             CCCCCEEEEcCChHHHHHHHHH
Q 018869          321 SLEKPVVTACGTGVTACILALV  342 (349)
Q Consensus       321 ~~~~~vivyC~~G~rA~~~~~~  342 (349)
                      ..++||++||.+|.|++.++..
T Consensus        84 ~~~~pvL~HC~sG~Rt~~l~al  105 (135)
T TIGR01244        84 AAEGPVLAYCRSGTRSSLLWGF  105 (135)
T ss_pred             hCCCCEEEEcCCChHHHHHHHH
Confidence            2358999999999999887654

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>KOG1717 consensus Dual specificity phosphatase [Defense mechanisms]

Probab=96.00  E-value=0.0044  Score=56.67  Aligned_cols=105  Identities=20%  Similarity=0.296  Sum_probs=65.6

Q ss_pred             ccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCccccc-----ccCCCCCCCCCCHHHHHHHHHHc
Q 018869           78 VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVA-----DRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        78 Is~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~-----~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      +|.+||...+..++++++|+|         +    +..||.+|+++-+..+.     ....++...+|........-.+ 
T Consensus         6 ~s~~wlnr~l~~~nllllDCR---------s----es~~i~~A~~valPalmlrrl~~g~l~~ra~~p~~~d~~~~~~~-   71 (343)
T KOG1717|consen    6 KSVAWLNRQLELGNLLLLDCR---------S----ESSHIESAINVALPALMLRRLTGGNLPVRALFPRSCDDKRFPAR-   71 (343)
T ss_pred             HHHHHHHhhcccCceEEEecC---------C----ccchhhhhhhhcchHHHHHHHhCCCCcceeccCCcccccccccc-
Confidence            789999999998899999999         4    57899999999876532     2222233344433221111111 


Q ss_pred             CCCCCCcEEEECCCCc-----chHHHHH----HHHHHcCCCceeEeCCCHHHHHhC
Q 018869          153 GLENKDGLVVYDGKGI-----FSAARVW----WMFRVFGHDRVWVLDGGLPRWRAS  199 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~-----~~a~r~~----~~L~~~G~~~V~~L~GG~~~W~~~  199 (349)
                        -+...||.||....     ..++++.    ..++..|. .++.|.||+...+++
T Consensus        72 --c~~v~vilyD~~~~e~e~~~~~~s~Lg~ll~kl~~~g~-~a~yL~ggF~~fq~e  124 (343)
T KOG1717|consen   72 --CGTVTVILYDESSAEWEEETGAESVLGLLLKKLKDEGC-SARYLSGGFSKFQAE  124 (343)
T ss_pred             --CCcceeeecccccccccccchhhhHHHHHHHHHHhcCc-chhhhhcccchhhhh
Confidence              12367899986411     1123322    23455576 499999999988764

>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function

Probab=96.00  E-value=0.023  Score=45.69  Aligned_cols=91  Identities=18%  Similarity=0.229  Sum_probs=41.1

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCC---CCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEP---RKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~---~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~  321 (349)
                      .++.+++.+..+.+=-.||+.|+..|-.+.....   ......|-  .-+|+|+..     +. .+.+.+.+...... .
T Consensus        14 Q~~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl--~y~~iPv~~-----~~-~~~~~v~~f~~~l~-~   84 (110)
T PF04273_consen   14 QPSPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGL--QYVHIPVDG-----GA-ITEEDVEAFADALE-S   84 (110)
T ss_dssp             S--HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT---EEEE----T-----TT---HHHHHHHHHHHH-T
T ss_pred             CCCHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCC--eEEEeecCC-----CC-CCHHHHHHHHHHHH-h
Confidence            4678888877665545799999987642211000   00000010  113444432     11 34444443322211 1


Q ss_pred             CCCCEEEEcCChHHHHHHHHHHH
Q 018869          322 LEKPVVTACGTGVTACILALVLF  344 (349)
Q Consensus       322 ~~~~vivyC~~G~rA~~~~~~L~  344 (349)
                      .++||.+||.+|.||+.+|..-+
T Consensus        85 ~~~Pvl~hC~sG~Ra~~l~~l~~  107 (110)
T PF04273_consen   85 LPKPVLAHCRSGTRASALWALAQ  107 (110)
T ss_dssp             TTTSEEEE-SCSHHHHHHHHHHH
T ss_pred             CCCCEEEECCCChhHHHHHHHHh
Confidence            35799999999999998877654

; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.

>COG5105 MIH1 Mitotic inducer, protein phosphatase [Cell division and chromosome partitioning]

Probab=95.91  E-value=0.016  Score=54.34  Aligned_cols=80  Identities=20%  Similarity=0.281  Sum_probs=60.7

Q ss_pred             cccCHHHHHHHhhc------CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 018869          244 LIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (349)
Q Consensus       244 ~~i~~~~v~~~~~~------~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~  317 (349)
                      .+|+.|.++..++.      .+-+|||.|-+=||           +.|||-.|+||.-            .++|.-.|..
T Consensus       242 ~RIs~etlk~vl~g~~~~~f~kCiIIDCRFeYEY-----------~GGHIinaVNi~s------------~~~l~~~F~h  298 (427)
T COG5105         242 QRISVETLKQVLEGMYNIDFLKCIIIDCRFEYEY-----------RGGHIINAVNISS------------TKKLGLLFRH  298 (427)
T ss_pred             hhcCHHHHHHHHhchhhhhhhceeEEeecceeee-----------cCceeeeeeecch------------HHHHHHHHHh
Confidence            36888988887763      13569999999999           6799999999874            3455666664


Q ss_pred             cCCCCCCCEEEEcC-ChHHHHHHHHHHHhC
Q 018869          318 EGISLEKPVVTACG-TGVTACILALVLFPV  346 (349)
Q Consensus       318 ~~i~~~~~vivyC~-~G~rA~~~~~~L~~~  346 (349)
                      +-++--.-+|++|. +.+||-.++.-|+..
T Consensus       299 kplThp~aLifHCEfSshRaP~LA~HlRN~  328 (427)
T COG5105         299 KPLTHPRALIFHCEFSSHRAPRLAQHLRNM  328 (427)
T ss_pred             ccccCceeEEEEeecccccchhHHHHHhhh
Confidence            44554567899996 678998898888754

>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.81  E-value=0.26  Score=39.88  Aligned_cols=84  Identities=14%  Similarity=0.214  Sum_probs=48.2

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCC-------CCCCCccccCCCcccCcccccCCCCCCCCHHH---HHHH
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEP-------RKGIRSGHVPGSKCIPFPQMLDASQTLLPADE---LKKR  314 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~-------~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~e---l~~~  314 (349)
                      -++++++.+....+=..||..|+..|=.|.-..-       ..+....|||      ..      +.=+..++   +++.
T Consensus        15 Qi~~~D~~~iaa~GFksiI~nRPDgEe~~QP~~~~i~~aa~~aGl~y~~iP------V~------~~~iT~~dV~~f~~A   82 (130)
T COG3453          15 QISPADIASIAALGFKSIICNRPDGEEPGQPGFAAIAAAAEAAGLTYTHIP------VT------GGGITEADVEAFQRA   82 (130)
T ss_pred             CCCHHHHHHHHHhccceecccCCCCCCCCCCChHHHHHHHHhcCCceEEee------cC------CCCCCHHHHHHHHHH
Confidence            3567777766554444689999987754432110       0112223444      21      11123334   3444


Q ss_pred             HHHcCCCCCCCEEEEcCChHHHHHHHHHHH
Q 018869          315 FEQEGISLEKPVVTACGTGVTACILALVLF  344 (349)
Q Consensus       315 ~~~~~i~~~~~vivyC~~G~rA~~~~~~L~  344 (349)
                      +.+    .+.||..||.+|.||..+|..-.
T Consensus        83 l~e----aegPVlayCrsGtRs~~ly~~~~  108 (130)
T COG3453          83 LDE----AEGPVLAYCRSGTRSLNLYGLGE  108 (130)
T ss_pred             HHH----hCCCEEeeecCCchHHHHHHHHH
Confidence            443    46799999999999998876543

>KOG3636 consensus Uncharacterized conserved protein, contains TBC and Rhodanese domains [General function prediction only]

Probab=92.21  E-value=0.44  Score=46.91  Aligned_cols=100  Identities=27%  Similarity=0.340  Sum_probs=60.8

Q ss_pred             ccHHHHHHhcC--CC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc-
Q 018869           78 VSVDWLHANLR--EP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL-  152 (349)
Q Consensus        78 Is~~~L~~~l~--~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~-  152 (349)
                      |++-+|.++-.  .+  +..|+|+|         |.+.|..||+-.|.|++-.-          |+..+++|+..+..+ 
T Consensus       309 isv~el~~~~~~~~~~VrFFiVDcR---------paeqynaGHlstaFhlDc~l----------mlqeP~~Fa~av~sLl  369 (669)
T KOG3636|consen  309 ISVIELTSHDEISSGSVRFFIVDCR---------PAEQYNAGHLSTAFHLDCVL----------MLQEPEKFAIAVNSLL  369 (669)
T ss_pred             hhHHHhhcccccccCceEEEEEecc---------chhhcccccchhhhcccHHH----------HhcCHHHHHHHHHHHH
Confidence            55555544322  22  36699999         89999999999999998754          445567888766543 


Q ss_pred             -----CCCCC-----CcEEEECCCCcch----HHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          153 -----GLENK-----DGLVVYDGKGIFS----AARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       153 -----gi~~~-----~~VVvy~~~g~~~----a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                           -|..+     +.+.+. +.|...    .--+..++.+-+-.-|.++.||+.+..
T Consensus       370 ~aqrqtie~~s~aggeHlcfm-GsGr~EED~YmnMviA~FlQKnk~yVS~~~GGy~~lh  427 (669)
T KOG3636|consen  370 CAQRQTIERDSNAGGEHLCFM-GSGRDEEDNYMNMVIAMFLQKNKLYVSFVQGGYKKLH  427 (669)
T ss_pred             HHHHHhhhccccCCcceEEEe-ccCcchHHHHHHHHHHHHHhcCceEEEEecchHHHHH
Confidence                 23333     344444 333211    112222333334446999999998765

>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function

Probab=87.94  E-value=2.2  Score=34.21  Aligned_cols=84  Identities=23%  Similarity=0.148  Sum_probs=36.1

Q ss_pred             cccHHHHHHhcCCCCcEEEEeccCCCCCCCC-Chh----hhhcCCCCCceecCcccccccCCCCCCCCCCH---HHHHHH
Q 018869           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRN-PFQ----EYQVAHIPGALFFDVDGVADRTTNLPHMLPSE---EAFAAA  148 (349)
Q Consensus        77 lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~-~~~----~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~---~~~~~~  148 (349)
                      -++++++.++...+=-.||+.|..-  +..+ +..    +-...+==.-+++|+..          .-++.   +.|.+.
T Consensus        14 Q~~~~d~~~la~~GfktVInlRpd~--E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~----------~~~~~~~v~~f~~~   81 (110)
T PF04273_consen   14 QPSPEDLAQLAAQGFKTVINLRPDG--EEPGQPSSAEEAAAAEALGLQYVHIPVDG----------GAITEEDVEAFADA   81 (110)
T ss_dssp             S--HHHHHHHHHCT--EEEE-S-TT--STTT-T-HHCHHHHHHHCT-EEEE----T----------TT--HHHHHHHHHH
T ss_pred             CCCHHHHHHHHHCCCcEEEECCCCC--CCCCCCCHHHHHHHHHHcCCeEEEeecCC----------CCCCHHHHHHHHHH
Confidence            3789999887765435799999211  1000 000    00000000235566542          11233   345555


Q ss_pred             HHHcCCCCCCcEEEECCCCcchHHHHHHH
Q 018869          149 VSALGLENKDGLVVYDGKGIFSAARVWWM  177 (349)
Q Consensus       149 ~~~~gi~~~~~VVvy~~~g~~~a~r~~~~  177 (349)
                      +..+    +.+|++||..|. ++..+|.+
T Consensus        82 l~~~----~~Pvl~hC~sG~-Ra~~l~~l  105 (110)
T PF04273_consen   82 LESL----PKPVLAHCRSGT-RASALWAL  105 (110)
T ss_dssp             HHTT----TTSEEEE-SCSH-HHHHHHHH
T ss_pred             HHhC----CCCEEEECCCCh-hHHHHHHH
Confidence            5543    468999999876 66655443

; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=86.85  E-value=0.14  Score=51.78  Aligned_cols=95  Identities=20%  Similarity=0.147  Sum_probs=60.8

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      -+-||++++...   +.+.++|.|         ...+|..+|+++++|+|+. ..+.            +++...--.++
T Consensus       621 ~prmsAedl~~~---~~l~v~d~r---------~~~ef~r~~~s~s~nip~~-~~ea------------~l~~~~~l~~~  675 (725)
T KOG1093|consen  621 CPRISAEDLIWL---KMLYVLDTR---------QESEFQREHFSDSINIPFN-NHEA------------DLDWLRFLPGI  675 (725)
T ss_pred             CccccHHHHHHH---HHHHHHhHH---------HHHHHHHhhccccccCCcc-chHH------------HHHHhhcchHh
Confidence            345777777655   357899999         6889999999999999997 2111            11111100011


Q ss_pred             --CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHH
Q 018869          155 --ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR  195 (349)
Q Consensus       155 --~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~  195 (349)
                        ..+..+|+|.. +.-.+++....+..+-+.++-++.+|+++
T Consensus       676 ~~~~~~~~v~~~~-~~K~~~e~~~~~~~mk~p~~cil~~~~~~  717 (725)
T KOG1093|consen  676 VCSEGKKCVVVGK-NDKHAAERLTELYVMKVPRICILHDGFNN  717 (725)
T ss_pred             HHhhCCeEEEecc-chHHHHHHhhHHHHhcccHHHHHHHHHhh
Confidence              23456677754 33356666666666667778889988874

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=85.82  E-value=5  Score=33.21  Aligned_cols=53  Identities=26%  Similarity=0.425  Sum_probs=30.4

Q ss_pred             HHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHH-HHcCCCceeEeCCCHHHHHhCCCCcc
Q 018869          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMF-RVFGHDRVWVLDGGLPRWRASGYDVE  204 (349)
Q Consensus       143 ~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L-~~~G~~~V~~L~GG~~~W~~~G~pv~  204 (349)
                      +.|.+.+..    .+.+|++||..|. ++..+|.++ ...|.+.-.++.    .-++.|+.++
T Consensus        76 ~~f~~~~~~----~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~----~~~~~G~~~~  129 (135)
T TIGR01244        76 ETFRAAIGA----AEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVR----RAQAAGYDLS  129 (135)
T ss_pred             HHHHHHHHh----CCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHH----HHHHcCCCcc
Confidence            445555653    4588999999887 666665443 444664323332    2244566554

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>PLN02727 NAD kinase

Probab=81.98  E-value=2.5  Score=45.73  Aligned_cols=88  Identities=25%  Similarity=0.198  Sum_probs=44.7

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCC-CCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPE-PRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~-~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      -++.++++...+.+=-.||+.|+..|-.+.... -....+..-| .-+|+|...     ....+.+++.+..+...-...
T Consensus       268 Qpspe~la~LA~~GfKTIINLRpd~E~~q~~~~ee~eAae~~GL-~yVhIPVs~-----~~apt~EqVe~fa~~l~~slp  341 (986)
T PLN02727        268 QVTEEGLKWLLEKGFKTIVDLRAEIVKDNFYQAAVDDAISSGKI-EVVKIPVEV-----RTAPSAEQVEKFASLVSDSSK  341 (986)
T ss_pred             CCCHHHHHHHHHCCCeEEEECCCCCcCCCchhHHHHHHHHHcCC-eEEEeecCC-----CCCCCHHHHHHHHHHHHhhcC
Confidence            467888877665543469999998773111100 0000000000 123444321     122345555554443201346


Q ss_pred             CCEEEEcCChHHHHH
Q 018869          324 KPVVTACGTGVTACI  338 (349)
Q Consensus       324 ~~vivyC~~G~rA~~  338 (349)
                      +||++||.+|.+.+-
T Consensus       342 kPVLvHCKSGarRAG  356 (986)
T PLN02727        342 KPIYLHSKEGVWRTS  356 (986)
T ss_pred             CCEEEECCCCCchHH
Confidence            899999999995543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	349
3olh_A	302	Human 3-Mercaptopyruvate Sulfurtransferase Length =		8e-53
1urh_A	280	The "rhodanese" Fold And Catalytic Mechanism Of 3-M		3e-47
1orb_A	296	Active Site Structural Features For Chemically Modi		1e-46
1dp2_A	293	Crystal Structure Of The Complex Between Rhodanese		2e-45
1rhs_A	296	Sulfur-Substituted Rhodanese Length = 296		3e-45
1boh_A	296	Sulfur-Substituted Rhodanese (Orthorhombic Form) Le		3e-45
1rhd_A	293	Structure Of Bovine Liver Rhodanese. I. Structure D		7e-45
3utn_X	327	Crystal Structure Of Tum1 Protein From Saccharomyce		9e-33
1uar_A	285	Crystal Structure Of Rhodanese From Thermus Thermop		2e-18
3aax_A	277	Crystal Structure Of Probable Thiosulfate Sulfurtra		2e-15
3hwi_A	298	Crystal Structure Of Probable Thiosulfate Sulfurtra		3e-15
3aay_A	277	Crystal Structure Of Probable Thiosulfate Sulfurtra		5e-14
1h4k_X	271	Sulfurtransferase From Azotobacter Vinelandii In Co		8e-12
3hzu_A	318	Crystal Structure Of Probable Thiosulfate Sulfurtra		1e-10
1e0c_A	271	Sulfurtransferase From Azotobacter Vinelandii Lengt		2e-10
3p3a_A	320	Crystal Structure Of A Putative Thiosulfate Sulfurt		2e-10
3ipp_A	416	Crystal Structure Of Sulfur-Free Ynje Length = 416		1e-09
2wlx_A	423	Putative Thiosulfate Sulfurtransferase Ynje Length		2e-08
3ipo_A	416	Crystal Structure Of Ynje Length = 416		2e-08
2wlr_A	423	Putative Thiosulfate Sulfurtransferase Ynje Length		7e-07
1okg_A	373	3-Mercaptopyruvate Sulfurtransferase From Leishmani		1e-06

>pdb|3OLH|A Chain A, Human 3-Mercaptopyruvate Sulfurtransferase Length = 302

Iteration: 1
 Score =  204 bits (518), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 108/273 (39%), Positives = 149/273 (54%), Gaps = 27/273 (9%)
Query: 75  EPVVSVDWLHANLREPD----LKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
           + +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +D
Sbjct: 21  QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSD 80
Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWV 188
           RT+   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +
Sbjct: 81  RTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSL 140
Query: 189 LDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTL 248
           LDGGL  W      + S  S  A                     P  F+ +  P  I T 
Sbjct: 141 LDGGLRHWLRQNLPLSSGKSQPA---------------------PAEFRAQLDPAFIKTY 179
Query: 249 EQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPA 308
           E +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  IPF   L         
Sbjct: 180 EDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSP 239
Query: 309 DELKKRFEQEGISLEKPVVTACGTGVTACILAL 341
           +E++  F+++ + L KP+V  CG+GVTAC +AL
Sbjct: 240 EEIRHLFQEKKVDLSKPLVATCGSGVTACHVAL 272

>pdb|1URH|A Chain A, The "rhodanese" Fold And Catalytic Mechanism Of 3-Mercaptopyruvate Sulfotransferases: Crystal Structure Of Ssea From Escherichia Coli Length = 280

Iteration: 1
 Score =  185 bits (469), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 100/267 (37%), Positives = 146/267 (54%), Gaps = 23/267 (8%)
Query: 78  VSVDWLHANLREPDLKVLDASWYMP-DEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ LP
Sbjct: 6   VGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLP 65
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
           HMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL  W
Sbjct: 66  HMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGW 125
Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
           +            D +L    A E  E            F   F P  +  +  V     
Sbjct: 126 QR-----------DDLLLEEGAVELPEG----------EFNAAFNPEAVVKVTDVLLASH 164
Query: 257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE 316
           E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++   + L   DEL   F 
Sbjct: 165 ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGE-LKTTDELDAIFF 223
Query: 317 QEGISLEKPVVTACGTGVTACILALVL 343
             G+S +KP++ + G+GVTA ++ L L
Sbjct: 224 GRGVSYDKPIIVSXGSGVTAAVVLLAL 250

>pdb|1ORB|A Chain A, Active Site Structural Features For Chemically Modified Forms Of Rhodanese Length = 296

Iteration: 1
 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/275 (39%), Positives = 143/275 (52%), Gaps = 29/275 (10%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           EL+  FE + + L KP++  C  GVTAC +AL  +
Sbjct: 227 ELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAY 261

>pdb|1DP2|A Chain A, Crystal Structure Of The Complex Between Rhodanese And Lipoate Length = 293

Iteration: 1
 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/275 (39%), Positives = 142/275 (51%), Gaps = 29/275 (10%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           EL+  FE + + L KP++     GVTAC +AL  +
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAY 261

>pdb|1RHS|A Chain A, Sulfur-Substituted Rhodanese Length = 296

Iteration: 1
 Score =  179 bits (453), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/275 (39%), Positives = 142/275 (51%), Gaps = 29/275 (10%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           EL+  FE + + L KP++     GVTAC +AL  +
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAY 261

>pdb|1BOH|A Chain A, Sulfur-Substituted Rhodanese (Orthorhombic Form) Length = 296

Iteration: 1
 Score =  179 bits (453), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/275 (39%), Positives = 142/275 (51%), Gaps = 29/275 (10%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           EL+  FE + + L KP++     GVTAC +AL  +
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAY 261

>pdb|1RHD|A Chain A, Structure Of Bovine Liver Rhodanese. I. Structure Determination At 2.5 Angstroms Resolution And A Comparison Of The Conformation And Sequence Of Its Two Domains Length = 293

Iteration: 1
 Score =  177 bits (450), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/275 (38%), Positives = 143/275 (52%), Gaps = 29/275 (10%)
Query: 77  VVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+ 
Sbjct: 9   LVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKA 67
Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLD 190
           +    MLPSE  FA  V +LG+ N   +VVY+G   G F A RVWWMFRVFGH  V VL+
Sbjct: 68  SPYEVMLPSEAGFADYVGSLGISNDTHVVVYNGDDLGSFYAPRVWWMFRVFGHRTVSVLN 127
Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
           GG   W   G+ V S  S                        P  F+      L+ T EQ
Sbjct: 128 GGFRNWLKEGHPVTSEPSRPE---------------------PAIFKATLNRSLLKTYEQ 166
Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           V  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L  +      +
Sbjct: 167 VLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMDFLTENGFEKSPE 226
Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVLF 344
           EL+  FE + + L KP++     GVTAC +AL  +
Sbjct: 227 ELRAMFEAKKVDLTKPLIATXRKGVTACHIALAAY 261

>pdb|3UTN|X Chain X, Crystal Structure Of Tum1 Protein From Saccharomyces Cerevisiae Length = 327

Iteration: 1
 Score =  137 bits (345), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 21/258 (8%)
Query: 95  LDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG 153
           +DA+WY+P  +  N         IP ++FFD+D ++D+ +  PHM P+++ F  A+S LG
Sbjct: 50  VDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMSNLG 109
Query: 154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAIL 213
           ++  D LVVYD  G FS+ R  W   V GH +V++L+    ++R   Y ++SS       
Sbjct: 110 VQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLN-NFNQYREFKYPLDSSKVAAFSP 168
Query: 214 KASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDG 273
              +  E+ E     ++V    ++  FQ  L+ + E  K+      +   DARS  RF+G
Sbjct: 169 YPKSHYESSESFQDKEIV---DYEEMFQ--LVKSGELAKK------FNAFDARSLGRFEG 217
Query: 274 DAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLP-ADE-----LKKRFEQEGISLE--KP 325
             PEPR  I SGH+PG++ +P+  +LD      P A E     L+K  +    +L+  KP
Sbjct: 218 TEPEPRSDIPSGHIPGTQPLPYGSLLDPETKTYPEAGEAIHATLEKALKDFHCTLDPSKP 277
Query: 326 VVTACGTGVTACILALVL 343
            + +CGTGV+  I+   L
Sbjct: 278 TICSCGTGVSGVIIKTAL 295

>pdb|1UAR|A Chain A, Crystal Structure Of Rhodanese From Thermus Thermophilus Hb8 Length = 285

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 32/259 (12%)
Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +VS DW+  +L +P ++VL+      DE       Y   HIPGA    +D   D    
Sbjct: 7   EVLVSTDWVQEHLEDPKVRVLEV-----DED---ILLYDTGHIPGAQ--KIDWQRDFWDP 56
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +     SEE FA     LG+ N   +V+Y  K  + AA  +W F+  GH  V + +GG  
Sbjct: 57  VVRDFISEEEFAKLXERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLXNGGRQ 116
Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 254
           +W   G  + +          S      E  Y+ + +    ++     H+I         
Sbjct: 117 KWVEEGRPLTTEV-------PSYPPGRYEVPYRDESI--RAYRDDVLEHII--------K 159
Query: 255 IEEGTYQLVDARSKARFDGDAPE----PRKG-IRSGHVPGSKCIPFPQMLDASQTLLPAD 309
           ++EG   LVD RS   + G+       P++G +R+GH+PG+K IP+ + ++   T   A+
Sbjct: 160 VKEGKGALVDVRSPQEYRGELTHXPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAE 219
Query: 310 ELKKRFEQEGISLEKPVVT 328
           EL+  +E  GI+ +K +V 
Sbjct: 220 ELRALYEPLGITKDKDIVV 238

>pdb|3AAX|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium Tuberculosis: Monoclinic Form Length = 277

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 39/273 (14%)
Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 7   LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 57  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 197 RASGYDVESSASGDAILKASAA-SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNI 255
              G  + S      +   +A+  +   + ++ +V+     +                  
Sbjct: 117 ELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN----------------- 159
Query: 256 EEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
                 L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    +E
Sbjct: 160 ------LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEE 213
Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           L K +   G+   K  +  C  G  +     VL
Sbjct: 214 LAKLYADAGLDNSKETIAYCRIGERSSHTWFVL 246

>pdb|3HWI|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa2 (Rhodanese-Like Protein) From Mycobacterium Tuberculosis Length = 298

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 113/272 (41%), Gaps = 37/272 (13%)
Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 28  LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 77
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 78  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 137
Query: 197 RASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIE 256
              G  + S      +   +A+              P      F+  ++  +     N++
Sbjct: 138 ELDGRPLSSDPVSRPVTSYTASP-------------PDNTIRAFRDEVLAAI-----NVK 179
Query: 257 EGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADEL 311
                L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    +EL
Sbjct: 180 ----NLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEEL 235
Query: 312 KKRFEQEGISLEKPVVTACGTGVTACILALVL 343
            K +   G+   K  +  C  G  +     VL
Sbjct: 236 AKLYADAGLDNSKETIAYCRIGERSSHTWFVL 267

>pdb|3AAY|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Cysa3 (Rv3117) From Mycobacterium Tuberculosis: Orthorhombic Form Length = 277

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 111/273 (40%), Gaps = 39/273 (14%)
Query: 77  VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLP 136
           +VS DW  +NL  P +  ++      DE  +    Y   HI GA+   +D   D    + 
Sbjct: 7   LVSADWAESNLHAPKVVFVEV-----DEDTSA---YDRDHIAGAI--KLDWRTDLQDPVK 56
Query: 137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                 + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  +W
Sbjct: 57  RDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKW 116
Query: 197 RASGYDVESSASGDAILKASAA-SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNI 255
              G  + S      +   +A+  +   + ++ +V+     +                  
Sbjct: 117 ELDGRPLSSDPVSRPVTSYTASPPDNTIRAFRDEVLAAINVKN----------------- 159
Query: 256 EEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
                 L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    +E
Sbjct: 160 ------LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSDEE 213
Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           L K +   G+   K  +     G  +     VL
Sbjct: 214 LAKLYADAGLDNSKETIAYXRIGERSSHTWFVL 246

>pdb|1H4K|X Chain X, Sulfurtransferase From Azotobacter Vinelandii In Complex With Hypophosphite Length = 271

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 102/267 (38%), Gaps = 37/267 (13%)
Query: 83  LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
           L A L  P+L ++D +             Y   HIPGA F D           P + P  
Sbjct: 16  LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 202
           E   +    LG   +   VVYD +G   A R  W+  V G  R   L+GGL  W A    
Sbjct: 67  EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRP 126
Query: 203 VESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQL 262
           +         L A A              GP       +P    + + +   +      +
Sbjct: 127 LSRE------LPAPAG-------------GPVALSLHDEPTA--SRDYLLGRLGAADLAI 165
Query: 263 VDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL 322
            DARS   + G+     KG   GH+PG+    +   +D S+ L    ++  R E+ GI+ 
Sbjct: 166 WDARSPQEYRGEKVLAAKG---GHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITP 222
Query: 323 EKPVVTACGT----GVTACILALVLFP 345
           +K +VT C T    G+T  I   + +P
Sbjct: 223 DKEIVTHCQTHHRSGLTYLIAKALGYP 249

>pdb|3HZU|A Chain A, Crystal Structure Of Probable Thiosulfate Sulfurtransferase Ssea (Rhodanese) From Mycobacterium Tuberculosis Length = 318

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 50/270 (18%)
Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +V+ DWL A++  P L ++++     DE       Y V HIPGA+   +D   D    
Sbjct: 39  ERLVTADWLSAHMGAPGLAIVES-----DED---VLLYDVGHIPGAV--KIDWHTDLNDP 88
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
                 + E FA  +   G+   D +V+Y  K  + AA   W+F +FGH  V +L+GG  
Sbjct: 89  RVRDYINGEQFAELMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRD 148
Query: 195 RW----RASGYDVES-SASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 249
            W    R +  DV + + +G  +++    ++A  + ++  V+                  
Sbjct: 149 LWLAERRETTLDVPTKTCTGYPVVQ---RNDAPIRAFRDDVLAIL--------------- 190
Query: 250 QVKRNIEEGTYQLVDARSKARFDG------DAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 303
                   G   L+D RS   + G      D PE    +R+GH+P +  IP+ +  D S 
Sbjct: 191 --------GAQPLIDVRSPEEYTGKRTHMPDYPE-EGALRAGHIPTAVHIPWGKAADESG 241
Query: 304 TLLPADELKKRFEQEGISLEKPVVTACGTG 333
                +EL++ ++   I+ +   V  C  G
Sbjct: 242 RFRSREELERLYDF--INPDDQTVVYCRIG 269

>pdb|1E0C|A Chain A, Sulfurtransferase From Azotobacter Vinelandii Length = 271

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 101/267 (37%), Gaps = 37/267 (13%)
Query: 83  LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSE 142
           L A L  P+L ++D +             Y   HIPGA F D           P + P  
Sbjct: 16  LQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPR 66
Query: 143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYD 202
           E   +    LG   +   VVYD +G   A R  W+  V G  R   L+GGL  W A    
Sbjct: 67  EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRP 126
Query: 203 VESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQL 262
           +         L A A              GP       +P    + + +   +      +
Sbjct: 127 LSRE------LPAPAG-------------GPVALSLHDEPTA--SRDYLLGRLGAADLAI 165
Query: 263 VDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL 322
            DARS   + G+     KG   GH+PG+    +   +D S+ L    ++  R E+ GI+ 
Sbjct: 166 WDARSPQEYRGEKVLAAKG---GHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELGITP 222
Query: 323 EKPVVTACGT----GVTACILALVLFP 345
           +K +VT   T    G+T  I   + +P
Sbjct: 223 DKEIVTHXQTHHRSGLTYLIAKALGYP 249

>pdb|3P3A|A Chain A, Crystal Structure Of A Putative Thiosulfate Sulfurtransferase From Mycobacterium Thermoresistible Length = 320

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 94/229 (41%), Gaps = 42/229 (18%)
Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +V+ DWL +NL  P L ++++     DE       Y   HIPGA+   +D   D    
Sbjct: 40  ERLVTADWLASNLGRPGLVIVES-----DED---VLLYDTGHIPGAV--KIDWHTDLNDP 89
Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
                 + E FAA +   G+   D +V+Y  K  + AA   W+F +FGH  V +LDGG  
Sbjct: 90  AVRDYINGEQFAALMDRKGVTRDDTVVIYGDKSNWWAAYAMWVFHLFGHPDVRLLDGGRD 149
Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 254
            W ++G D                     +V   Q  G    +    P     +   K +
Sbjct: 150 LWVSTGRDT------------------TLEVPTRQTSGYPVVERNDAP-----IRAFKDD 186
Query: 255 IEE--GTYQLVDARSKARFDG------DAPEPRKGIRSGHVPGSKCIPF 295
           +    G   L+D RS   + G      D PE    +R GH+P +  +P+
Sbjct: 187 VLRVLGKEPLIDVRSPQEYTGERTHMPDYPE-EGALRGGHIPTAVSVPW 234

>pdb|3IPP|A Chain A, Crystal Structure Of Sulfur-Free Ynje Length = 416

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 117/282 (41%), Gaps = 51/282 (18%)
Query: 75  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 125
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 124 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 175
Query: 126 DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 185
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 176 NEV--ESEPLWNKV-SDEQLKAMLAKHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKD 231
Query: 186 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 243
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 232 VRLLDGGWQTWSDAGLPVERGTP-------------------PKVKAEPDFGVKIPAQPQ 272
Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 295
           L+  +EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 273 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHM 331
Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC 337
               +   T+  AD++   ++   I  E+ V   CGTG  A 
Sbjct: 332 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRAS 373

>pdb|2WLX|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje Length = 423

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 51/282 (18%)
Query: 75  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 125
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 123 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 174
Query: 126 DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 185
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 175 NEV--ESEPLWNKV-SDEQLKAMLAKHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKD 230
Query: 186 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 243
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 231 VRLLDGGWQTWSDAGLPVERGTP-------------------PKVKAEPDFGVKIPAQPQ 271
Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 295
           L+  +EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 272 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHM 330
Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC 337
               +   T+  AD++   ++   I  E+ V    GTG  A 
Sbjct: 331 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYXGTGWRAS 372

>pdb|3IPO|A Chain A, Crystal Structure Of Ynje Length = 416

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 116/282 (41%), Gaps = 51/282 (18%)
Query: 75  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 125
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 124 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 175
Query: 126 DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 185
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 176 NEV--ESEPLWNKV-SDEQLKAMLAKHGIRHDTTVILY-GRDVYAAARVAQIMLYAGVKD 231
Query: 186 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 243
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 232 VRLLDGGWQTWSDAGLPVERGTP-------------------PKVKAEPDFGVKIPAQPQ 272
Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 295
           L+  +EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 273 LMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHM 331
Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC 337
               +   T+  AD++   ++   I  E+ V    GTG  A 
Sbjct: 332 EDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYXGTGWRAS 373

>pdb|2WLR|A Chain A, Putative Thiosulfate Sulfurtransferase Ynje Length = 423

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 113/282 (40%), Gaps = 51/282 (18%)
Query: 75  EPVVSVDWLHANLREP---------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDV 125
           E +V   WLH +L++          D KV++A+W  P       + Y ++HIPGA + D 
Sbjct: 123 EQLVYPQWLH-DLQQGKEVTAKPAGDWKVIEAAWGAP-------KLYLISHIPGADYIDT 174
Query: 126 DGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDR 185
           + V   +  L + + S+E   A ++  G+ +   +++Y G+ +++AARV  +    G   
Sbjct: 175 NEV--ESEPLWNKV-SDEQLKAXLAKHGIRHDTTVILY-GRDVYAAARVAQIXLYAGVKD 230
Query: 186 VWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKF--QPH 243
           V +LDGG   W  +G  VE                        +V     F  K   QP 
Sbjct: 231 VRLLDGGWQTWSDAGLPVERGTP-------------------PKVKAEPDFGVKIPAQPQ 271
Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAP-----EPR---KGIRSGHVPGSKCIPF 295
           L    EQ +  +      LV  RS   F G        +P+    G R GH  GS     
Sbjct: 272 LXLDXEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHA-GSDSTHX 330
Query: 296 PQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTAC 337
               +   T   AD++   ++   I  E+ V    GTG  A 
Sbjct: 331 EDFHNPDGTXRSADDITAXWKAWNIKPEQQVSFYXGTGWRAS 372

>pdb|1OKG|A Chain A, 3-Mercaptopyruvate Sulfurtransferase From Leishmania Major Length = 373

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 106/267 (39%), Gaps = 42/267 (15%)
Query: 91  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR---TTNLPHMLPSEEAFAA 147
           + +++D  + +  +     Q Y   H+  A+  DVD    +   T+   H LP    F  
Sbjct: 27  EYRIVDCRYSLKIKDHGSIQ-YAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFID 85
Query: 148 AVSALGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS 206
              A G   +  ++ YD + G     R+WW     G D  +V++GG    +A+G + ES 
Sbjct: 86  WCXANGXAGELPVLCYDDECGAXGGCRLWWXLNSLGAD-AYVINGGFQACKAAGLEXESG 144
Query: 207 ASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQ--LVD 264
                   A+                   F+T FQ H +         ++E   Q  + D
Sbjct: 145 EPSSLPRPATH----------------WPFKTAFQHHYL---------VDEIPPQAIITD 179
Query: 265 ARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML---DASQTLLPADELKKRF----EQ 317
           ARS  RF             GH+ G++ +P+   L      + L   +E++       + 
Sbjct: 180 ARSADRFASTVRPYAADKXPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIXTVVQG 239
Query: 318 EGISLE-KPVVTACGTGVTACI-LALV 342
            G + +    V + G+GVTACI +ALV
Sbjct: 240 AGDAADLSSFVFSXGSGVTACINIALV 266

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	349
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	1e-136
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	1e-136
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	1e-132
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	1e-111
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	1e-110
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	1e-109
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	1e-106
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	1e-104
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	6e-99
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	8e-21
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	1e-07
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	6e-72
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	6e-19
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	3e-11
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	1e-09
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	4e-09
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	7e-10
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	6e-07
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	1e-08
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	3e-08
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	8e-08
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	1e-06
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	2e-06
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	2e-06
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	4e-06
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	5e-06
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	7e-04
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	5e-06
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	4e-04
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	7e-06
1tq1_A	129	AT5G66040, senescence-associated family protein; C	2e-05
1tq1_A	129	AT5G66040, senescence-associated family protein; C	2e-04
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	8e-05
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	2e-04
2jtq_A	85	Phage shock protein E; solution structure rhodanes	2e-04
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	3e-04
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	5e-04
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	7e-04
3r2u_A	466	Metallo-beta-lactamase family protein; structural	7e-04
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	9e-04

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens} Length = 302

 Score =  388 bits (999), Expect = e-136
 Identities = 107/274 (39%), Positives = 147/274 (53%), Gaps = 27/274 (9%)

Query: 76  PVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 131
            +VS  W+   LR P     L++LDASWY+P   R+  +E++  HIPGA FFD+D  +DR
Sbjct: 22  SMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDR 81

Query: 132 TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG--KGIFSAARVWWMFRVFGHDRVWVL 189
           T+   HMLP  E FA     LG+     +V+YD   +G++SA RVWWMFR FGH  V +L
Sbjct: 82  TSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLL 141

Query: 190 DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 249
           DGGL  W      + S  S                        P  F+ +  P  I T E
Sbjct: 142 DGGLRHWLRQNLPLSSGKS---------------------QPAPAEFRAQLDPAFIKTYE 180

Query: 250 QVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPAD 309
            +K N+E   +Q+VD+R+  RF G  PEPR GI  GH+PG+  IPF   L         +
Sbjct: 181 DIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKSPE 240

Query: 310 ELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           E++  F+++ + L KP+V  CG+GVTAC +AL  
Sbjct: 241 EIRHLFQEKKVDLSKPLVATCGSGVTACHVALGA 274

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2 Length = 280

 Score =  386 bits (994), Expect = e-136
 Identities = 98/269 (36%), Positives = 144/269 (53%), Gaps = 23/269 (8%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
             V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ 
Sbjct: 4   WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSP 63

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           LPHMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL 
Sbjct: 64  LPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLA 123

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 254
            W+     +E  A                       +    F   F P  +  +  V   
Sbjct: 124 GWQRDDLLLEEGAV---------------------ELPEGEFNAAFNPEAVVKVTDVLLA 162

Query: 255 IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR 314
             E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ +++     L   DEL   
Sbjct: 163 SHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDAI 221

Query: 315 FEQEGISLEKPVVTACGTGVTACILALVL 343
           F   G+S +KP++ +CG+GVTA ++ L L
Sbjct: 222 FFGRGVSYDKPIIVSCGSGVTAAVVLLAL 250

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A Length = 296

 Score =  378 bits (972), Expect = e-132
 Identities = 109/275 (39%), Positives = 142/275 (51%), Gaps = 29/275 (10%)

Query: 76  PVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 131
            +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+
Sbjct: 8   ALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDK 66

Query: 132 TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVL 189
            +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL
Sbjct: 67  ASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVL 126

Query: 190 DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLE 249
           +GG   W   G+ V S  S                        P  F+      L+ T E
Sbjct: 127 NGGFRNWLKEGHPVTSEPS---------------------RPEPAIFKATLNRSLLKTYE 165

Query: 250 QVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPA 308
           QV  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +PF   L         
Sbjct: 166 QVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSP 225

Query: 309 DELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           +EL+  FE + + L KP++  C  GVTAC +AL  
Sbjct: 226 EELRAMFEAKKVDLTKPLIATCRKGVTACHIALAA 260

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A Length = 277

 Score =  323 bits (831), Expect = e-111
 Identities = 62/275 (22%), Positives = 106/275 (38%), Gaps = 39/275 (14%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           + +VS DW  +NL  P +  ++               Y   HI GA+  D     D    
Sbjct: 5   DVLVSADWAESNLHAPKVVFVEVDEDTS--------AYDRDHIAGAIKLDWR--TDLQDP 54

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +       + F+  +S  G+ N+D +++Y G   + AA  +W F+++GH++V +LDGG  
Sbjct: 55  VKRDFVDAQQFSKLLSERGIANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRK 114

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLI-WTLEQVKR 253
           +W   G  + S                            T++      + I    ++V  
Sbjct: 115 KWELDGRPLSSDPV---------------------SRPVTSYTASPPDNTIRAFRDEVLA 153

Query: 254 NIEEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPA 308
            I      L+D RS   F G    P      +  R GH+PG+  +P+ +  +   T    
Sbjct: 154 AI--NVKNLIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKSD 211

Query: 309 DELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           +EL K +   G+   K  +  C  G  +     VL
Sbjct: 212 EELAKLYADAGLDNSKETIAYCRIGERSSHTWFVL 246

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2 Length = 285

 Score =  321 bits (825), Expect = e-110
 Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 40/278 (14%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +VS DW+  +L +P ++VL+               Y   HIPGA   D     D    
Sbjct: 7   EVLVSTDWVQEHLEDPKVRVLEVDE--------DILLYDTGHIPGAQKIDWQ--RDFWDP 56

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +     SEE FA  +  LG+ N   +V+Y  K  + AA  +W F+  GH  V +++GG  
Sbjct: 57  VVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQ 116

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLI----WTLEQ 250
           +W   G  + +                           P  ++  ++   I      + +
Sbjct: 117 KWVEEGRPLTTEVP---------------------SYPPGRYEVPYRDESIRAYRDDVLE 155

Query: 251 VKRNIEEGTYQLVDARSKARFDGD----APEPRKG-IRSGHVPGSKCIPFPQMLDASQTL 305
               ++EG   LVD RS   + G+       P++G +R+GH+PG+K IP+ + ++   T 
Sbjct: 156 HIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTF 215

Query: 306 LPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
             A+EL+  +E  GI+ +K +V  C     +     VL
Sbjct: 216 KSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVL 253

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X Length = 271

 Score =  318 bits (818), Expect = e-109
 Identities = 61/280 (21%), Positives = 98/280 (35%), Gaps = 38/280 (13%)

Query: 64  ADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFF 123
            D+++L       V+    L A L  P+L ++D +             Y   HIPGA F 
Sbjct: 2   DDFASL-----PLVIEPADLQARLSAPELILVDLTSA---------ARYAEGHIPGARFV 47

Query: 124 DVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGH 183
           D           P + P  E   +    LG   +   VVYD +G   A R  W+  V G 
Sbjct: 48  DPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ 107

Query: 184 DRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPH 243
            R   L+GGL  W A    +                                        
Sbjct: 108 QRYHYLNGGLTAWLAEDRPLSRELP---------------------APAGGPVALSLHDE 146

Query: 244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 303
              + + +   +      + DARS   + G+        + GH+PG+    +   +D S+
Sbjct: 147 PTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLAA---KGGHIPGAVNFEWTAAMDPSR 203

Query: 304 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
            L    ++  R E+ GI+ +K +VT C T   + +  L+ 
Sbjct: 204 ALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIA 243

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3 Length = 373

 Score =  316 bits (811), Expect = e-106
 Identities = 58/301 (19%), Positives = 105/301 (34%), Gaps = 47/301 (15%)

Query: 55  MSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV 114
           MS+ AA  +              +    +  +L   + +++D  + +   + +   +Y  
Sbjct: 1   MSAPAAAPKHPGKVF--------LDPSEVADHL--AEYRIVDCRYSLKI-KDHGSIQYAK 49

Query: 115 AHIPGALFFDVDGVADR---TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK-GIFS 170
            H+  A+  DVD    +   T+   H LP    F     A G+  +  ++ YD + G   
Sbjct: 50  EHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMANGMAGELPVLCYDDECGAMG 109

Query: 171 AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV 230
             R+WWM    G D  +V++GG    +A+G ++ES                         
Sbjct: 110 GCRLWWMLNSLGAD-AYVINGGFQACKAAGLEMESG-----------------------E 145

Query: 231 VGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS 290
                      P           +       + DARS  RF             GH+ G+
Sbjct: 146 PSSLPRPATHWPFKTAFQHHYLVDEIPPQAIITDARSADRFASTVRPYAADKMPGHIEGA 205

Query: 291 KCIPFPQMLDAS---QTLLPADELKKRFEQ-----EGISLEKPVVTACGTGVTACILALV 342
           + +P+   L      + L   +E++             +     V +CG+GVTACI   +
Sbjct: 206 RNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIAL 265

Query: 343 L 343
           +
Sbjct: 266 V 266

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A Length = 318

 Score =  307 bits (789), Expect = e-104
 Identities = 64/310 (20%), Positives = 108/310 (34%), Gaps = 38/310 (12%)

Query: 39  HTHTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDAS 98
           H H     +         S+        +  + +  E +V+ DWL A++  P L ++++ 
Sbjct: 3   HHHHHHMGTLEAQTQGPGSMPLPADPSPTLSAYAHPERLVTADWLSAHMGAPGLAIVESD 62

Query: 99  WYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKD 158
                        Y V HIPGA+  D     D          + E FA  +   G+   D
Sbjct: 63  E--------DVLLYDVGHIPGAVKIDWH--TDLNDPRVRDYINGEQFAELMDRKGIARDD 112

Query: 159 GLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAA 218
            +V+Y  K  + AA   W+F +FGH  V +L+GG   W A   +                
Sbjct: 113 TVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVP---------- 162

Query: 219 SEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEP 278
                          T +    +        +       G   L+D RS   + G     
Sbjct: 163 -----------TKTCTGYPVVQRNDAPIRAFRDDVLAILGAQPLIDVRSPEEYTGKRTHM 211

Query: 279 -----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTG 333
                   +R+GH+P +  IP+ +  D S      +EL++ +  + I+ +   V  C  G
Sbjct: 212 PDYPEEGALRAGHIPTAVHIPWGKAADESGRFRSREELERLY--DFINPDDQTVVYCRIG 269

Query: 334 VTACILALVL 343
             +     VL
Sbjct: 270 ERSSHTWFVL 279

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score =  298 bits (764), Expect = 6e-99
 Identities = 65/303 (21%), Positives = 106/303 (34%), Gaps = 43/303 (14%)

Query: 56  SSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREP--------DLKVLDASWYMPDEQRN 107
           S L+           +   E +V   WLH   +          D KV++A+W  P     
Sbjct: 104 SILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAP----- 158

Query: 108 PFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG 167
             + Y ++HIPGA + D + V            S+E   A ++  G+ +   +++Y    
Sbjct: 159 --KLYLISHIPGADYIDTNEVES---EPLWNKVSDEQLKAMLAKHGIRHDTTVILYGR-D 212

Query: 168 IFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ 227
           +++AARV  +    G   V +LDGG   W  +G  VE                       
Sbjct: 213 VYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV---------------- 256

Query: 228 GQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHV 287
            +       +   QP L+  +EQ +  +      LV  RS   F G           G +
Sbjct: 257 -KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEI 315

Query: 288 PG-------SKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILA 340
            G       S         +   T+  AD++   ++   I  E+ V   CGTG  A    
Sbjct: 316 AGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETF 375

Query: 341 LVL 343
           +  
Sbjct: 376 MYA 378

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score = 91.7 bits (228), Expect = 8e-21
 Identities = 29/258 (11%), Positives = 59/258 (22%), Gaps = 64/258 (24%)

Query: 78  VSVDWLHANLREPDLKVLDA-------SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
           ++       L++ + K +D         W       +        H   AL         
Sbjct: 6   LAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPS-------GHELAALNLSAS---- 54

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 190
                     S E   A +    L+    + +Y          V    +  G   + +L 
Sbjct: 55  -----WLDKMSTEQLNAWIKQHNLKTDAPVALYGNDK--DVDAVKTRLQKAGLTHISILS 107

Query: 191 GGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQ 250
             L                                        +  Q       +   + 
Sbjct: 108 DALSEP-------------------------------------SRLQKLPHFEQLVYPQW 130

Query: 251 VKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ-TLLPAD 309
           +    +        A      +     P K     H+PG+  I   ++        +  +
Sbjct: 131 LHDLQQGKEVTAKPAGDWKVIEAAWGAP-KLYLISHIPGADYIDTNEVESEPLWNKVSDE 189

Query: 310 ELKKRFEQEGISLEKPVV 327
           +LK    + GI  +  V+
Sbjct: 190 QLKAMLAKHGIRHDTTVI 207

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A Length = 423

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 11/96 (11%)

Query: 246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTL 305
            TL+Q    +++   + +D R  A ++G          SGH   +  +            
Sbjct: 10  LTLDQ----LQQQNGKAIDTRPSAFYNGWPQTLNG--PSGHELAALNLSAS-----WLDK 58

Query: 306 LPADELKKRFEQEGISLEKPVVTACGTGVTACILAL 341
           +  ++L    +Q  +  + PV           +   
Sbjct: 59  MSTEQLNAWIKQHNLKTDAPVALYGNDKDVDAVKTR 94

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A Length = 230

 Score =  222 bits (568), Expect = 6e-72
 Identities = 47/253 (18%), Positives = 75/253 (29%), Gaps = 54/253 (21%)

Query: 91  DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS 150
           D  ++D           P   Y+  H+PGA   D+     R      +   E        
Sbjct: 6   DAVLVDTR---------PRPAYEAGHLPGARHLDLSAPKLRLREEAELKALEGGLTELFQ 56

Query: 151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 210
            LGL     +V+YD        R  +   + G + V +   G   +     + +      
Sbjct: 57  TLGLR--SPVVLYDEGLTSRLCRTAFFLGLGGLE-VQLWTEGWEPYATEKEEPK------ 107

Query: 211 AILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKAR 270
                                  T    K +   + T ++  R+       L+D RS   
Sbjct: 108 --------------------PERTEVVAKLRRDWLLTADEAARHP-----LLLDVRSPEE 142

Query: 271 FDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTAC 330
           F G    P    R G +PGSK  P    L                E+ G+   + V   C
Sbjct: 143 FQGKVHPPC-CPRGGRIPGSKNAPLELFLSPEG----------LLERLGLQPGQEVGVYC 191

Query: 331 GTGVTACILALVL 343
            +G  + +   VL
Sbjct: 192 HSGARSAVAFFVL 204

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 87.1 bits (215), Expect = 6e-19
 Identities = 45/269 (16%), Positives = 72/269 (26%), Gaps = 70/269 (26%)

Query: 76  PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
            V +   + A L    +L +LD         R     +  AH   A             N
Sbjct: 7   AVRTFHDIRAALLARRELALLDV--------REE-DPFAQAHPLFAA------------N 45

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           LP            + A        + VYD     +           G+  V +LDGGL 
Sbjct: 46  LPL-----SRLELEIHARVPRRDTPITVYDDGEGLAP-VAAQRLHDLGYSDVALLDGGLS 99

Query: 195 RWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRN 254
            WR +G ++      D  + + A  E +E       +     Q                 
Sbjct: 100 GWRNAGGELFR----DVNVPSKAFGELVEAERHTPSLAAEEVQALLD------------- 142

Query: 255 IEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR 314
                  ++DAR    +           ++  +PG   +P               EL  R
Sbjct: 143 -ARAEAVILDARRFDEY-----------QTMSIPGGISVPG-------------AELVLR 177

Query: 315 FEQEGISLEKPVVTACGTGVTACILALVL 343
             +        V+  C     + I    L
Sbjct: 178 VAELAPDPRTRVIVNCAGRTRSIIGTQSL 206

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 63.2 bits (153), Expect = 3e-11
 Identities = 43/273 (15%), Positives = 79/273 (28%), Gaps = 63/273 (23%)

Query: 75  EPVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
            P ++ + + A L    +  +LDA           F EYQ   IPG +      +  R  
Sbjct: 129 TPSLAAEEVQALLDARAEAVILDA---------RRFDEYQTMSIPGGISVPGAELVLRVA 179

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
            L                    +    ++V       S      +      + V  L  G
Sbjct: 180 ELA------------------PDPRTRVIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNG 221

Query: 193 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVK 252
              W  +G  +E   +      +    +A  +  +           +     +  L  + 
Sbjct: 222 TIGWTLAGQQLEHGQTRRFGAISQDTRKAAAQRAR-------AVADRAGVERL-DLAGLA 273

Query: 253 RNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE 310
           +  +E   T  L+D R+   +            +GH+PGS+  P               +
Sbjct: 274 QWQDEHDRTTYLLDVRTPEEY-----------EAGHLPGSRSTPG-------------GQ 309

Query: 311 LKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           L +  +         +V     GV A + A  L
Sbjct: 310 LVQETDHVASVRGARLVLVDDDGVRANMSASWL 342

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 58.6 bits (141), Expect = 1e-09
 Identities = 27/136 (19%), Positives = 35/136 (25%), Gaps = 29/136 (21%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             +    L   L EP  +VLD               Y   HIPGA +     +      L
Sbjct: 377 DTIDPTTLADWLGEPGTRVLDF--------TAS-ANYAKRHIPGAAWVLRSQLKQALERL 427

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
                                     V        A       +      V++LDGG   
Sbjct: 428 G--------------------TAERYVLTCGSSLLARFAVAEVQALSGKPVFLLDGGTSA 467

Query: 196 WRASGYDVESSASGDA 211
           W A+G   E   S  A
Sbjct: 468 WVAAGLPTEDGESLLA 483

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2 Length = 539

 Score = 56.7 bits (136), Expect = 4e-09
 Identities = 33/303 (10%), Positives = 73/303 (24%), Gaps = 82/303 (27%)

Query: 41  HTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWY 100
                  + +   +              ++       + +  L     E D      + Y
Sbjct: 230 QQLEHGQTRRFGAISQDTRKAAAQRARAVADRAGVERLDLAGLAQWQDEHD-----RTTY 284

Query: 101 MPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGL 160
           + D  R P  EY+  H+PG+                   P  +          +     L
Sbjct: 285 LLD-VRTPE-EYEAGHLPGSRS----------------TPGGQLVQETDHVASVRGAR-L 325

Query: 161 VVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASE 220
           V+ D  G+ +     W+ ++ G     +       +   G                    
Sbjct: 326 VLVDDDGVRANMSASWLAQM-GWQVAVLDGLSEADFSERGA------------------- 365

Query: 221 AIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK 280
                        +    +           +   + E   +++D  + A +         
Sbjct: 366 ------------WSAPLPRQPRADTIDPTTLADWLGEPGTRVLDFTASANY--------- 404

Query: 281 GIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILA 340
                H+PG+  +   Q+  A +  L                 +  V  CG+ + A    
Sbjct: 405 --AKRHIPGAAWVLRSQLKQALER-LGTA--------------ERYVLTCGSSLLARFAV 447

Query: 341 LVL 343
             +
Sbjct: 448 AEV 450

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139

 Score = 55.5 bits (134), Expect = 7e-10
 Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 15/100 (15%)

Query: 246 WTLEQVKRNIEEGT--YQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ 303
           ++ E +KR + +      LVD R  + +              H+P S  +P+    DA  
Sbjct: 25  YSFEDMKRIVGKHDPNVVLVDVREPSEYS-----------IVHIPASINVPYRSHPDAFA 73

Query: 304 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
             L   E +K+         K ++  C +G        V 
Sbjct: 74  --LDPLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVA 111

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae} Length = 139

 Score = 47.4 bits (113), Expect = 6e-07
 Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 18/130 (13%)

Query: 76  PVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
              S + +   +   +P++ ++D         R P  EY + HIP ++        D   
Sbjct: 23  QSYSFEDMKRIVGKHDPNVVLVDV--------REP-SEYSIVHIPASINVPYRSHPDA-- 71

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL 193
                      F   +     ++   L+ Y   G         +    G+    +  G +
Sbjct: 72  ----FALDPLEFEKQIGIPKPDSAKELIFYCASGK-RGGEAQKVASSHGYSNTSLYPGSM 126

Query: 194 PRWRASGYDV 203
             W + G D 
Sbjct: 127 NDWVSHGGDK 136

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1 Length = 152

 Score = 52.3 bits (125), Expect = 1e-08
 Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 32/146 (21%)

Query: 67  STLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD 126
           S ++++     ++   L    R P++ ++D         R+  +     HI G+L +   
Sbjct: 19  SHMAMARSISYITSTQLLPLHRRPNIAIIDV--------RDE-ERNYDGHIAGSLHYASG 69

Query: 127 GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVY-DGKGIFSAARVWWMFRV----- 180
              D+ ++L   +                +KD LV +     +        +        
Sbjct: 70  SFDDKISHLVQNVK---------------DKDTLVFHSALSQVRGPTCARRLVNYLDEKK 114

Query: 181 --FGHDRVWVLDGGLPRWRASGYDVE 204
              G   + +L+ G   W ASG  V 
Sbjct: 115 EDTGIKNIMILERGFNGWEASGKPVC 140

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A Length = 141

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 30/143 (20%)

Query: 77  VVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           +     L + L   EP   +LD         R+    Y   HI GA+   ++ + DR ++
Sbjct: 1   MSDAHVLKSRLEWGEPAFTILDV--------RDR-STYNDGHIMGAMAMPIEDLVDRASS 51

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
               L               +++D + VY      ++  V  + R  G + V  L GGL 
Sbjct: 52  S---LE--------------KSRD-IYVYGAGDEQTSQAVNLL-RSAGFEHVSELKGGLA 92

Query: 195 RWRASGYDVESSASGDAILKASA 217
            W+A G   E          A  
Sbjct: 93  AWKAIGGPTEGIIESRTPAGADD 115

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A Length = 144

 Score = 50.2 bits (120), Expect = 8e-08
 Identities = 28/138 (20%), Positives = 48/138 (34%), Gaps = 31/138 (22%)

Query: 88  REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA 147
               + V+D         R+  + Y+  HIP A+            ++P      +    
Sbjct: 30  GYEGIIVVDV--------RDA-EAYKECHIPTAI------------SIPG----NKINED 64

Query: 148 AVSALGLENKDG-LVVY-DGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES 205
               L   +K+  ++ Y  G     A +    F   G   V  L GG+  WR    +VE 
Sbjct: 65  TTKRL---SKEKVIITYCWGPACNGATKAAAKFAQLGFR-VKELIGGIEYWRKENGEVEG 120

Query: 206 SASGDAILKASAASEAIE 223
           +    A L  +   E++E
Sbjct: 121 TLGAKADLFWNMKKESLE 138

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A Length = 124

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 23/118 (19%), Positives = 35/118 (29%), Gaps = 29/118 (24%)

Query: 88  REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA 147
                 VLD         RN   + +   I GA+      +A R   L    P++     
Sbjct: 29  ATGKYVVLDV--------RNAPAQVKKDQIKGAIAMPAKDLATRIGELD---PAKT---- 73

Query: 148 AVSALGLENKDGLVVYDGKGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVE 204
                        VVYD  G  +       +    G +  + L G L  W+     +E
Sbjct: 74  ------------YVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLE 118

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A Length = 106

 Score = 44.9 bits (107), Expect = 2e-06
 Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 30/125 (24%)

Query: 82  WLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPS 141
            L     EP   +LD         R+    Y   HI GA+   ++ + DR ++    L  
Sbjct: 6   RLEWG--EPAFTILDV--------RDR-STYNDGHIMGAMAMPIEDLVDRASSS---LE- 50

Query: 142 EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY 201
                        +++D + VY      ++  V  + R  G + V  L GGL  W+A G 
Sbjct: 51  -------------KSRD-IYVYGAGDEQTSQAVNLL-RSAGFEHVSELKGGLAAWKAIGG 95

Query: 202 DVESS 206
             E  
Sbjct: 96  PTELE 100

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major} Length = 152

 Score = 46.2 bits (109), Expect = 2e-06
 Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 28/130 (21%)

Query: 80  VDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHML 139
           V+ L          V+D              +     I  ++            N+P + 
Sbjct: 13  VELLDNPDSLVKAAVIDCRDS----------DRDCGFIVNSI------------NMPTIS 50

Query: 140 PSEEAFAAAVSALGLENKDGLVVYDGK----GIFSAARVWWMFRVFGHD--RVWVLDGGL 193
            +EE +      L  E K+  V +  +        A R     +  G+    V+VL GG 
Sbjct: 51  CTEEMYEKLAKTLFEEKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGW 110

Query: 194 PRWRASGYDV 203
             +     DV
Sbjct: 111 EAFYHMYGDV 120

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1 Length = 154

 Score = 45.5 bits (107), Expect = 4e-06
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 27/140 (19%)

Query: 75  EPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
               +V WL+  L   + ++L  D         R P + Y+ +HI  A+   + G+  R 
Sbjct: 15  AISKTVAWLNEQLELGNERLLLMDC--------R-PQELYESSHIESAINVAIPGIMLRR 65

Query: 133 TN-----LPHMLPSEEAFAAAVSALGLENKDGLVVYD------GKGIFSAARVWWMFRVF 181
                  +  +    E         G    D +V+YD       +     + +  + +  
Sbjct: 66  LQKGNLPVRALFTRGEDRDRFTRRCG---TDTVVLYDESSSDWNENTGGESLLGLLLKKL 122

Query: 182 GHD--RVWVLDGGLPRWRAS 199
             +  R + L+GG  +++A 
Sbjct: 123 KDEGCRAFYLEGGFSKFQAE 142

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474

 Score = 46.9 bits (111), Expect = 5e-06
 Identities = 32/149 (21%), Positives = 49/149 (32%), Gaps = 31/149 (20%)

Query: 58  LAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHI 117
                  D +          VS D +   L +  L +LD         RN   E+   H+
Sbjct: 356 WTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDV--------RNV-DEWAGGHL 406

Query: 118 PGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWW 176
           P A    +  +A    ++P                    +DG + VY   G   +A    
Sbjct: 407 PQAHHIPLSKLAAHIHDVP--------------------RDGSVCVYCRTG-GRSAIAAS 445

Query: 177 MFRVFGHDRVWVLDGGLPRWRASGYDVES 205
           + R  G   V  + GG   WR  G+ VE+
Sbjct: 446 LLRAHGVGDVRNMVGGYEAWRGKGFPVEA 474

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp} Length = 474

 Score = 40.4 bits (94), Expect = 7e-04
 Identities = 37/256 (14%), Positives = 73/256 (28%), Gaps = 44/256 (17%)

Query: 99  WYMPDEQRNPFQEYQVAHIPGA-LFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENK 157
           W +  +  + F +  +A  P A ++F    + ++                         +
Sbjct: 225 WALQHKDEDAFVQALLAGQPEAPIYFARMKLVNKVGPRLLAELGAPERVDLPPERVRAWR 284

Query: 158 DGLVVYD-------GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 210
           +G VV D        K   + +      + F     W+L    P           + + D
Sbjct: 285 EGGVVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLLPADRPIH----LLAADAIAPD 340

Query: 211 AILKASAASEAIEKVYQGQVVGPTTFQTKFQPH---LIWTLEQVKRNIEEGTYQLVDARS 267
            I      S  I+ V           +            + ++V+  + +    L+D R+
Sbjct: 341 VIRAL--RSIGIDDVV-DWTDPAAVDRAAPDDVASYANVSPDEVRGALAQQGLWLLDVRN 397

Query: 268 KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV 327
              +             GH+P +  IP               +L        +  +  V 
Sbjct: 398 VDEWA-----------GGHLPQAHHIPL-------------SKLAAHIHD--VPRDGSVC 431

Query: 328 TACGTGVTACILALVL 343
             C TG  + I A +L
Sbjct: 432 VYCRTGGRSAIAASLL 447

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 32/133 (24%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPH 137
           ++V   H  L+E +  ++D         R+P Q + + H   A     D +     +   
Sbjct: 7   INVADAHQKLQEKEAVLVDI--------RDP-QSFAMGHAVQAFHLTNDTLGAFMRDND- 56

Query: 138 MLPSEEAFAAAVSALGLENKDG-LVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW 196
                               D  ++V    G  S           G+D V+ +DGG   W
Sbjct: 57  -------------------FDTPVMVMCYHGNSS-KGAAQYLLQQGYDVVYSIDGGFEAW 96

Query: 197 RASGYDVESSASG 209
           +   +  E +   
Sbjct: 97  QR-QFPAEVAYGA 108

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A Length = 108

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 14/88 (15%), Positives = 22/88 (25%), Gaps = 26/88 (29%)

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
            +    + ++E    LVD R    F             GH   +  +             
Sbjct: 8   NVADAHQKLQEKEAVLVDIRDPQSFA-----------MGHAVQAFHLTN----------- 45

Query: 307 PADELKKRFEQEGISLEKPVVTACGTGV 334
             D L           + PV+  C  G 
Sbjct: 46  --DTLGAFMRD--NDFDTPVMVMCYHGN 69

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A* Length = 169

 Score = 44.7 bits (105), Expect = 7e-06
 Identities = 22/167 (13%), Positives = 44/167 (26%), Gaps = 23/167 (13%)

Query: 40  THTTLKTSSSQSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASW 99
           +H     SS +       + +    +     + P E    +   H        +V+D   
Sbjct: 4   SHHHHHHSSGRENLYFQGMDSYSITNVK--YLDPTELHRWMQEGHTTTLREPFQVVDVRG 61

Query: 100 YMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG 159
                      +Y   HI     +    +      L  +                     
Sbjct: 62  S----------DYMGGHIKDGWHYAYSRLKQDPEYLRELKHRLLE-----KQADGRGALN 106

Query: 160 LVVY----DGKGIFSAARVWWMFRV--FGHDRVWVLDGGLPRWRASG 200
           ++ +      +G  +A  +            R+WVL GG  RW++  
Sbjct: 107 VIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVY 153

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Length = 129

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 25/130 (19%), Positives = 41/130 (31%), Gaps = 18/130 (13%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             VSV   H  L     + LD         R P +E+   H  GA+              
Sbjct: 18  SSVSVTVAHDLLLA-GHRYLDV--------RTP-EEFSQGHACGAINVPYMNRG------ 61

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
              +     F   VS+   ++ + ++V    G  S      +    G   V  + GG   
Sbjct: 62  ASGMSKNTDFLEQVSSHFGQSDN-IIVGCQSGGRSIKATTDLLHA-GFTGVKDIVGGYSA 119

Query: 196 WRASGYDVES 205
           W  +G   ++
Sbjct: 120 WAKNGLPTKA 129

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3 Length = 129

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 16/98 (16%)

Query: 237 QTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFP 296
           +    P  + ++      +  G ++ +D R+   F             GH  G+  +P+ 
Sbjct: 12  EESRVPSSV-SVTVAHDLLLAG-HRYLDVRTPEEFS-----------QGHACGAINVPYM 58

Query: 297 QMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGV 334
               AS      D L++            ++  C +G 
Sbjct: 59  N-RGASGMSKNTDFLEQVSSH--FGQSDNIIVGCQSGG 93

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A Length = 153

 Score = 41.4 bits (96), Expect = 8e-05
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 18/133 (13%)

Query: 76  PVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT 133
             +  + L A L     KVL  D+        R PF EY  +HI  A+  +   +  R  
Sbjct: 4   TQIVTERLVALLESGTEKVLLIDS--------R-PFVEYNTSHILEAININCSKLMKRRL 54

Query: 134 NLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF-------GHDRV 186
               +L +E    +A   + ++    +VVYD      A+     F            + V
Sbjct: 55  QQDKVLITELIQHSAKHKVDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSV 114

Query: 187 WVLDGGLPRWRAS 199
            +L GG   +   
Sbjct: 115 HLLAGGFAEFSRC 127

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori} Length = 110

 Score = 39.2 bits (92), Expect = 2e-04
 Identities = 17/106 (16%), Positives = 34/106 (32%), Gaps = 22/106 (20%)

Query: 106 RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDG-LVVYD 164
           R    EY+  H+P A    V+        L                   ++KD  ++++ 
Sbjct: 23  REL-DEYEELHLPNATLISVNDQEKLADFLS------------------QHKDKKVLLHC 63

Query: 165 GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGD 210
             G  +      M    G+     L+G +  +   G+ +    + D
Sbjct: 64  RAGRRALDAAKSM-HELGYTPY-YLEGNVYDFEKYGFRMVYDDTCD 107

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A Length = 85

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 13/73 (17%), Positives = 20/73 (27%), Gaps = 24/73 (32%)

Query: 261 QLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI 320
             +D R   ++           +  HV G+  IP               E+K+R      
Sbjct: 3   HWIDVRVPEQY-----------QQEHVQGAINIPL-------------KEVKERIATAVP 38

Query: 321 SLEKPVVTACGTG 333
                V   C  G
Sbjct: 39  DKNDTVKVYCNAG 51

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A* Length = 588

 Score = 41.1 bits (97), Expect = 4e-04
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 27/99 (27%)

Query: 245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT 304
                ++ R +E G   L+D R                  G + GS  IP          
Sbjct: 490 TVQWHEIDRIVENG-GYLIDVREPNELK-----------QGMIKGSINIPL--------- 528

Query: 305 LLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
               DEL+ R E+  + ++K +   C  G+   + A +L
Sbjct: 529 ----DELRDRLEE--VPVDKDIYITCQLGMRGYVAARML 561

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 4e-04
 Identities = 45/331 (13%), Positives = 94/331 (28%), Gaps = 104/331 (31%)

Query: 21  PQVFTSLLNKKLFYSRPKHTHTTLKTSSSQ---SPCV----M-----SSLAAGRRADYST 68
            QVF      K   SR +  +  L+ +  +   +  V    +     + +A      Y  
Sbjct: 123 NQVFA-----KYNVSRLQP-YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176

Query: 69  LSVSPKEPVVSVDWLH-ANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG 127
                 +    + WL+  N   P+  VL+                        L + +D 
Sbjct: 177 QCKMDFK----IFWLNLKNCNSPET-VLEMLQ--------------------KLLYQIDP 211

Query: 128 V----ADRTTNLPHMLPSEEAFAAAVSALGLEN--KDGLVVYDGKGIFSAARVW--WMFR 179
                +D ++N+   +    +  A +  L      ++ L+V           V     + 
Sbjct: 212 NWTSRSDHSSNIKLRI---HSIQAELRRLLKSKPYENCLLVLLN--------VQNAKAWN 260

Query: 180 VFGHD-RVWVL--DGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTF 236
            F    ++ +      +           +  S D         E        + +     
Sbjct: 261 AFNLSCKILLTTRFKQVTD--FLSAATTTHISLDHHSMTLTPDEVKS--LLLKYLD---- 312

Query: 237 QTKFQ--PHLIWT-----LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPG 289
             + Q  P  + T     L  +  +I +G          A +D             HV  
Sbjct: 313 -CRPQDLPREVLTTNPRRLSIIAESIRDG---------LATWD----------NWKHV-- 350

Query: 290 SKCIPFPQMLDASQTLLPADELKKRFEQEGI 320
             C     ++++S  +L   E +K F++  +
Sbjct: 351 -NCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4 Length = 157

 Score = 39.3 bits (91), Expect = 5e-04
 Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 29/151 (19%)

Query: 65  DYSTLSVSPKEPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALF 122
            +S+  V      ++   L+  + + ++ ++  DA        R   Q+YQ + I  +L 
Sbjct: 9   HHSSGLVPRGSGAITAKELYTMMTDKNISLIIMDA--------R-RMQDYQDSCILHSLS 59

Query: 123 FDVDGVADRTTN--LPHMLPSEEAFAAAVSALGLENKDGLVVYD----GKGIFSAARVWW 176
              + ++   T   +   LP +       +     N + +V+ D     K +     +  
Sbjct: 60  VPEEAISPGVTASWIEAHLPDDS----KDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRS 115

Query: 177 MFRVFGHD--------RVWVLDGGLPRWRAS 199
           +                  VL+GG   W   
Sbjct: 116 LKDALFKWESKTVLRNEPLVLEGGYENWLLC 146

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens} Length = 158

 Score = 38.9 bits (90), Expect = 7e-04
 Identities = 17/101 (16%), Positives = 33/101 (32%), Gaps = 9/101 (8%)

Query: 108 PFQEYQVAHIPGALFFDVDG--VADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDG 165
           PF EY  +HI GA+  +        R       +    +      +        ++VYD 
Sbjct: 42  PFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLISCREGKDSFKRIFSKEIIVYDE 101

Query: 166 -----KGIFSAARVWWMFRVFGHD--RVWVLDGGLPRWRAS 199
                  +  +  +  +      +     VL GGL  ++ +
Sbjct: 102 NTNEPSRVMPSQPLHIVLESLKREGKEPLVLKGGLSSFKQN 142

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus} Length = 466

 Score = 40.4 bits (94), Expect = 7e-04
 Identities = 18/158 (11%), Positives = 40/158 (25%), Gaps = 38/158 (24%)

Query: 189 LDGGLPRWRASGYDVESSASGDAILKASA--ASEAIEKVYQGQVVGPTTFQTKFQPHLIW 246
            D           + +     +  L       S+A   +          +Q       I 
Sbjct: 321 YDKNFINQIGWYLNYDQ----EINLIGDYHLVSKATHTLQLIGYDDIAGYQLPQSK--IQ 374

Query: 247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLL 306
           T      +I      ++D R+   ++           +GH+  +  +P            
Sbjct: 375 TRSIHSEDITGNESHILDVRNDNEWN-----------NGHLSQAVHVPH----------- 412

Query: 307 PADELKKRFEQEGISLEKPVVTACGTG----VTACILA 340
              +L +       +    +   C +G    +   IL 
Sbjct: 413 --GKLLETDLP--FNKNDVIYVHCQSGIRSSIAIGILE 446

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4 Length = 157

 Score = 38.5 bits (89), Expect = 9e-04
 Identities = 21/141 (14%), Positives = 45/141 (31%), Gaps = 25/141 (17%)

Query: 73  PKEPVVSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
            ++  ++   L+  + + ++ ++  DA        R   Q+YQ + I  +L   V   A 
Sbjct: 12  KEKGAITAKELYTMMTDKNISLIIMDA--------R-RMQDYQDSCILHSL--SVPEEAI 60

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG------------IFSAARVWWMF 178
                   + +     +  +     N + +V+ D                   A   W  
Sbjct: 61  SPGVTASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWES 120

Query: 179 RVFGHDRVWVLDGGLPRWRAS 199
           +    +   VL+GG   W   
Sbjct: 121 KTVLRNEPLVLEGGYENWLLC 141

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	349
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	100.0
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	100.0
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	100.0
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	100.0
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	100.0
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	100.0
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	100.0
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	100.0
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	100.0
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	100.0
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	100.0
2wlr_A	423	Putative thiosulfate sulfurtransferase YNJE; rhoda	100.0
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	100.0
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	100.0
1yt8_A	539	Thiosulfate sulfurtransferase; rhodanase domains,	99.97
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.94
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	99.89
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.88
3foj_A	100	Uncharacterized protein; protein SSP1007, structur	99.88
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	99.87
3iwh_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.87
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	99.87
1tq1_A	129	AT5G66040, senescence-associated family protein; C	99.86
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	99.86
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	99.86
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	99.86
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	99.86
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	99.85
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	99.84
1e0c_A	271	Rhodanese, sulfurtransferase; sulfur metabolism, t	99.84
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	99.82
1uar_A	285	Rhodanese; sulfurtransferase, riken structural gen	99.82
3aay_A	277	Putative thiosulfate sulfurtransferase; sulfurtran	99.82
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	99.82
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	99.82
1wv9_A	94	Rhodanese homolog TT1651; CDC25, phosphatase, sulf	99.81
3olh_A	302	MST, 3-mercaptopyruvate sulfurtransferase; structu	99.8
1urh_A	280	3-mercaptopyruvate sulfurtransferase; rhodanese; 2	99.8
1rhs_A	296	Sulfur-substituted rhodanese; transferase, sulfurt	99.79
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	99.78
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	99.78
2jtq_A	85	Phage shock protein E; solution structure rhodanes	99.78
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	99.78
3hzu_A	318	Thiosulfate sulfurtransferase SSEA; niaid, ssgcid,	99.77
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	99.75
1vee_A	134	Proline-rich protein family; hypothetical protein,	99.75
2eg4_A	230	Probable thiosulfate sulfurtransferase; structural	99.73
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	99.73
4f67_A	265	UPF0176 protein LPG2838; structural genomics, PSI-	99.73
2ouc_A	142	Dual specificity protein phosphatase 10; rhodanese	99.73
1qb0_A	211	Protein (M-phase inducer phosphatase 2 (CDC25B));	99.73
2a2k_A	175	M-phase inducer phosphatase 2; dual specificity, s	99.72
3d1p_A	139	Putative thiosulfate sulfurtransferase YOR285W; at	99.71
1c25_A	161	CDC25A; hydrolase, cell cycle phosphatase,dual spe	99.7
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	99.7
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	99.7
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	99.69
3op3_A	216	M-phase inducer phosphatase 3; structural genomics	99.68
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	99.67
3iwh_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.66
3foj_A	100	Uncharacterized protein; protein SSP1007, structur	99.66
3utn_X	327	Thiosulfate sulfurtransferase TUM1; rhodanese-like	99.66
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	99.65
1okg_A	373	Possible 3-mercaptopyruvate sulfurtransferase; rho	99.65
3eme_A	103	Rhodanese-like domain protein; alpha-beta-alpha sa	99.64
1tq1_A	129	AT5G66040, senescence-associated family protein; C	99.62
1gmx_A	108	GLPE protein; transferase, rhodanese, sulfurtransf	99.62
3gk5_A	108	Uncharacterized rhodanese-related protein TVG08686	99.61
1wv9_A	94	Rhodanese homolog TT1651; CDC25, phosphatase, sulf	99.61
2fsx_A	148	RV0390, COG0607: rhodanese-related sulfurtransfera	99.58
2jtq_A	85	Phage shock protein E; solution structure rhodanes	99.58
3i2v_A	127	Adenylyltransferase and sulfurtransferase MOCS3; r	99.56
3hix_A	106	ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q	99.56
3ilm_A	141	ALR3790 protein; rhodanese-like, NSR437H, NESG, st	99.56
1qxn_A	137	SUD, sulfide dehydrogenase; polysulfide-sulfur tra	99.55
3nhv_A	144	BH2092 protein; alpha-beta protein, structural gen	99.55
2k0z_A	110	Uncharacterized protein HP1203; A/B domain, struct	99.55
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	99.54
2hhg_A	139	Hypothetical protein RPA3614; MCSG, structural gen	99.54
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	99.53
3flh_A	124	Uncharacterized protein LP_1913; alpha-beta protei	99.52
3g5j_A	134	Putative ATP/GTP binding protein; N-terminal domai	99.5
3r2u_A	466	Metallo-beta-lactamase family protein; structural	99.48
1vee_A	134	Proline-rich protein family; hypothetical protein,	99.43
4f67_A	265	UPF0176 protein LPG2838; structural genomics, PSI-	99.42
1hzm_A	154	Dual specificity protein phosphatase 6; hydrolase;	99.42
1t3k_A	152	Arath CDC25, dual-specificity tyrosine phosphatase	99.39
2vsw_A	153	Dual specificity protein phosphatase 16; hydrolase	99.38
2j6p_A	152	SB(V)-AS(V) reductase; arsenate reductase, antimon	99.36
2ouc_A	142	Dual specificity protein phosphatase 10; rhodanese	99.33
3tg1_B	158	Dual specificity protein phosphatase 10; kinase/rh	99.33
3f4a_A	169	Uncharacterized protein YGR203W; protein phosphata	99.28
3op3_A	216	M-phase inducer phosphatase 3; structural genomics	99.25
1qb0_A	211	Protein (M-phase inducer phosphatase 2 (CDC25B));	99.24
1c25_A	161	CDC25A; hydrolase, cell cycle phosphatase,dual spe	99.22
2a2k_A	175	M-phase inducer phosphatase 2; dual specificity, s	99.21
3ics_A	588	Coenzyme A-disulfide reductase; pyridine nucleotid	99.18
3ntd_A	565	FAD-dependent pyridine nucleotide-disulphide oxido	99.13
2gwf_A	157	Ubiquitin carboxyl-terminal hydrolase 8; protein-p	98.97
1whb_A	157	KIAA0055; deubiqutinating enzyme, UBPY, structural	98.94
2f46_A	156	Hypothetical protein; structural genomics, joint c	97.48
2f46_A	156	Hypothetical protein; structural genomics, joint c	96.69
4erc_A	150	Dual specificity protein phosphatase 23; alpha bet	87.68
2img_A	151	Dual specificity protein phosphatase 23; DUSP23, V	86.07
1xri_A	151	AT1G05000; structural genomics, protein structure	85.4

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.6e-55  Score=415.26  Aligned_cols=257  Identities=30%  Similarity=0.571  Sum_probs=221.0

Q ss_pred             CCcccHHHHHHhcCC---CCcEEEEeccCCCCCCCCChhhh-hcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 018869           75 EPVVSVDWLHANLRE---PDLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~---~~~~iIDvR~~~~~~~~~~~~~y-~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~  150 (349)
                      .++||+++|.++++.   .++++||++|+||+..+++..|| ++||||||++++++.+.+...+++++||++++|++.|+
T Consensus        27 ~~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv~~Dld~~~d~~~~~ph~LP~~~~f~~~l~  106 (327)
T 3utn_X           27 FDLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSIFFDIDAISDKKSPYPHMFPTKKVFDDAMS  106 (327)
T ss_dssp             CEEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCEECCTTTSSCTTSSSTTCCCCHHHHHHHHH
T ss_pred             ccccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCeeeChHHhcCCCCCCCCCCcCHHHHHHHHH
Confidence            348999999999853   35899999999999888888888 78999999999999999998999999999999999999


Q ss_pred             HcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcc
Q 018869          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  230 (349)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (349)
                      ++||+++++|||||+.+++.|+|+||+|+++||++|++|||| .+|+++|+|++++.....                .+.
T Consensus       107 ~lGI~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~~~~~----------------~p~  169 (327)
T 3utn_X          107 NLGVQKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSKVAAF----------------SPY  169 (327)
T ss_dssp             HTTCCTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCCCSCS----------------CSS
T ss_pred             HcCCCCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCCccCc----------------CCc
Confidence            999999999999999888899999999999999999999987 899999999998753210                000


Q ss_pred             -cCCcceeeccCCccccCHHHHHHHhhcC----CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCC
Q 018869          231 -VGPTTFQTKFQPHLIWTLEQVKRNIEEG----TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTL  305 (349)
Q Consensus       231 -~~~~~~~~~~~~~~~i~~~~v~~~~~~~----~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l  305 (349)
                       .....+...+++..+++.+++.+.++++    +.+|||+|+++||.|+.++|+.+.+.||||||+|+||.+++++++++
T Consensus       170 p~~~~~~~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~~  249 (327)
T 3utn_X          170 PKSHYESSESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETKT  249 (327)
T ss_dssp             CCCCCCCSCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTCC
T ss_pred             CCcccccccccCchheecHHHHhhhhhcccccccceeeccCccceecccccCccccccCCCCCCCcccChhhccCCCCCC
Confidence             1112344456677889999999988753    47899999999999999999888899999999999999999988754


Q ss_pred             C--CHHHHHHHHHH------cCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          306 L--PADELKKRFEQ------EGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       306 ~--~~~el~~~~~~------~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +  +.++|++.|++      .|++++++||+||++|++||.++++|+.+||
T Consensus       250 ~~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~laL~~lG~  300 (327)
T 3utn_X          250 YPEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIKTALELAGV  300 (327)
T ss_dssp             CCCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHHHHHHHTTC
T ss_pred             CCCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHHHHHHHcCC
Confidence            4  34556665554      3899999999999999999999999999998

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=100.00  E-value=1.9e-52  Score=394.98  Aligned_cols=254  Identities=42%  Similarity=0.824  Sum_probs=230.9

Q ss_pred             CCCcccHHHHHHhcCCC----CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 018869           74 KEPVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV  149 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~----~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~  149 (349)
                      ..++||++||+++++++    +++||||||++++..+++..+|..||||||+|||++.+.+....+++++|+.+.|++++
T Consensus        20 ~~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi~i~~~~~~~~~~~~~~~lp~~~~~~~~~   99 (302)
T 3olh_A           20 FQSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYA   99 (302)
T ss_dssp             CCCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCEECCTTTSSCSSCSSSSCCCCHHHHHHHH
T ss_pred             CCCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCeEeCHHHhcCcCCCCCCCCCCHHHHHHHH
Confidence            56889999999999764    79999999998876666778999999999999999998888888899999999999999


Q ss_pred             HHcCCCCCCcEEEECCC--CcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhc
Q 018869          150 SALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ  227 (349)
Q Consensus       150 ~~~gi~~~~~VVvy~~~--g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~  227 (349)
                      +.+|++++++|||||..  ++++|+|+||+|+.+||++|++|+||+.+|.++|+|+++..+                   
T Consensus       100 ~~lgi~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~-------------------  160 (302)
T 3olh_A          100 GRLGVGAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGKS-------------------  160 (302)
T ss_dssp             HHTTCCSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSCC-------------------
T ss_pred             HHcCCCCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCCC-------------------
Confidence            99999999999999963  556799999999999999999999999999999999998753                   


Q ss_pred             CcccCCcceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCC
Q 018869          228 GQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLP  307 (349)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~  307 (349)
                        .+.+.+|.+..++..+++.+++.+.+++++.+|||+|++.||.|+.++|....+.||||||+|+|+.++.+.++++++
T Consensus       161 --~~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~~~~~~  238 (302)
T 3olh_A          161 --QPAPAEFRAQLDPAFIKTYEDIKENLESRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQEGLEKS  238 (302)
T ss_dssp             --CCCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSSSCBCC
T ss_pred             --CcCcCccccccCccceecHHHHHHhhcCCCcEEEecCCHHHccccccCCCcCCcCccCCCceecCHHHhcCCCCccCC
Confidence              234567888888899999999999998788999999999999999999887778999999999999999988889999


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          308 ADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       308 ~~el~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++|+++|.+.+++++++||+||++|.||+.++++|+.+||
T Consensus       239 ~~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~~G~  279 (302)
T 3olh_A          239 PEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGK  279 (302)
T ss_dssp             HHHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHTTTC
T ss_pred             HHHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHHcCC
Confidence            99999999998999999999999999999999999999998

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=100.00  E-value=8.9e-50  Score=372.41  Aligned_cols=252  Identities=38%  Similarity=0.759  Sum_probs=223.4

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCC-CCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQ-RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~-~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      .++|+++||++++++++++||||||+.+... +++..+|..||||||+|+|+..+.+....+++++|+.++|++.++.+|
T Consensus         3 ~~~is~~~l~~~l~~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~g   82 (280)
T 1urh_A            3 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   82 (280)
T ss_dssp             CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             CceeeHHHHHHhcCCCCeEEEEeeccCCcccccchhhhhhhCcCCCCEECCHHHhcCCCCCCCCCCCCHHHHHHHHHHcC
Confidence            4689999999999877899999998766432 224679999999999999999888776667889999999999999999


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCC
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (349)
                      ++++++|||||..|...|.+++|+|+.+||++|++|+||+.+|.++|+|++++.+                     .+.+
T Consensus        83 i~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~---------------------~~~~  141 (280)
T 1urh_A           83 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV---------------------ELPE  141 (280)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC---------------------CCCC
T ss_pred             CCCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC---------------------CCCC
Confidence            9999999999988764499999999999999999999999999999999998763                     2345


Q ss_pred             cceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHH
Q 018869          234 TTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  313 (349)
Q Consensus       234 ~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~  313 (349)
                      .+|....++...++.+++.+.+++++.+|||+|++.||.|..++|+...+.||||||+|+|+.++.+ ++.+++.++|++
T Consensus       142 ~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~-~~~~~~~~~l~~  220 (280)
T 1urh_A          142 GEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDA  220 (280)
T ss_dssp             CCCCCCCCGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-SSSBCCHHHHHH
T ss_pred             CccccccCcccEEcHHHHHHHhcCCCcEEEeCCchhhcccccCCCCCCCcCccCCCceEeeHHHhhc-CCccCCHHHHHH
Confidence            6787788888899999999999877899999999999999988887666789999999999999987 678999999999


Q ss_pred             HHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          314 RFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       314 ~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +|.+.+++++++||+||++|.||+.++..|+.+||
T Consensus       221 ~~~~~~~~~~~~ivv~C~~G~rs~~a~~~L~~~G~  255 (280)
T 1urh_A          221 IFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDV  255 (280)
T ss_dssp             HHHTTTCCSSSCEEEECCSSSTHHHHHHHHHHTTC
T ss_pred             HHHHcCCCCCCCEEEECChHHHHHHHHHHHHHcCC
Confidence            99988999999999999999999999999999998

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=100.00  E-value=1.3e-49  Score=374.54  Aligned_cols=253  Identities=43%  Similarity=0.783  Sum_probs=225.7

Q ss_pred             CCCcccHHHHHHhcCC----CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHH
Q 018869           74 KEPVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAV  149 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~----~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~  149 (349)
                      +.++|+++||++++++    ++++|||||+++++ .+++..+|..||||||+|+|+..+.+.....++++|++++|++.+
T Consensus         6 ~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~-~~~~~~ey~~gHIpGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~l   84 (296)
T 1rhs_A            6 YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADYV   84 (296)
T ss_dssp             CCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTT-SCCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHHH
T ss_pred             cCceeeHHHHHHHHhccccCCCeEEEEecccCcC-CcchhhhHhhCcCCCCEEeCHHHhcCCCCCCCCCCCCHHHHHHHH
Confidence            3578999999999876    57999999988776 333478999999999999999988766556778999999999999


Q ss_pred             HHcCCCCCCcEEEECCC--CcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhc
Q 018869          150 SALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ  227 (349)
Q Consensus       150 ~~~gi~~~~~VVvy~~~--g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~  227 (349)
                      +.+|++++++|||||..  |...+.+++|+|+.+||++|++|+||+.+|.++|+|++++.+.                  
T Consensus        85 ~~lgi~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~------------------  146 (296)
T 1rhs_A           85 GSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPSR------------------  146 (296)
T ss_dssp             HHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCCC------------------
T ss_pred             HHcCCCCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCCCC------------------
Confidence            99999999999999987  7666999999999999999999999999999999999987532                  


Q ss_pred             CcccCCcceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCC-CCCccccCCCcccCcccccCCCCCCC
Q 018869          228 GQVVGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLL  306 (349)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~-~~~~GHIPGA~~ip~~~l~~~~~~l~  306 (349)
                         +.+.+|..+.+....++.+++.+.+++++.+|||+|++.||.|..++++. ..+.||||||+|+|+.++.+.+++++
T Consensus       147 ---~~~~~~~~~~~~~~~i~~~e~~~~~~~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~~~~~  223 (296)
T 1rhs_A          147 ---PEPAIFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEK  223 (296)
T ss_dssp             ---CCCCCCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBC
T ss_pred             ---CCCCCcccCCCcceEEcHHHHHHHhcCCCceEEeCCchhhcccccCCcccCCCcCccCCCCEeecHHHhcCCCCcCC
Confidence               24567777778888999999999988778999999999999998877754 34689999999999999998888999


Q ss_pred             CHHHHHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          307 PADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       307 ~~~el~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +.++|+++|.+.+++++++||+||++|.||+.+++.|+.+||
T Consensus       224 ~~~~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~G~  265 (296)
T 1rhs_A          224 SPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGK  265 (296)
T ss_dssp             CHHHHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence            999999999988899999999999999999999999999998

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=100.00  E-value=5.7e-48  Score=358.43  Aligned_cols=241  Identities=24%  Similarity=0.397  Sum_probs=217.0

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      .+.|+++||++++++++++|||||         +..+|..||||||+|+|+..+.......++++|+.+.|+++++.+|+
T Consensus         8 ~~~is~~~l~~~l~~~~~~iiDvR---------~~~ey~~ghIpgA~~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi   78 (271)
T 1e0c_A            8 PLVIEPADLQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGELGH   78 (271)
T ss_dssp             CSEECHHHHHTTTTCTTEEEEECS---------CHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTC
T ss_pred             CceeeHHHHHHhccCCCeEEEEcC---------CcchhhhCcCCCCEECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCC
Confidence            467999999999987789999999         78999999999999999998887766778999999999999999999


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCCc
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT  234 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (349)
                      +++++|||||..|..++.+++|+|+.+||++|++|+||+.+|.++|+|++++.+                     .+.+.
T Consensus        79 ~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~---------------------~~~~~  137 (271)
T 1e0c_A           79 RPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP---------------------APAGG  137 (271)
T ss_dssp             CTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC---------------------CCCCS
T ss_pred             CCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC---------------------CCCCC
Confidence            999999999988766899999999999999999999999999999999998763                     23456


Q ss_pred             ceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHH
Q 018869          235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR  314 (349)
Q Consensus       235 ~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~  314 (349)
                      +|....+....++.+++.+.+++++.+|||+|++.||.|...++   .+.||||||+|+|+.++.+.++.++..++|++.
T Consensus       138 ~~~~~~~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~~g~~~~~---~~~ghIpgA~~ip~~~~~~~~~~~~~~~~l~~~  214 (271)
T 1e0c_A          138 PVALSLHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLA---AKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGR  214 (271)
T ss_dssp             CCCCCCCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCS---SSCSBCTTCEECCGGGGEEGGGTTEECTTHHHH
T ss_pred             CccccCCccccccHHHHHHHhcCCCcEEEEcCChhhcCCccCCC---CcCCcCCCceeccHHHhCCCCCCCCCHHHHHHH
Confidence            77777777778999999999988789999999999999877655   478999999999999998766666555999999


Q ss_pred             HHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          315 FEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       315 ~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +.+.+++++++||+||++|.||+.+++.|+.+||
T Consensus       215 ~~~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~  248 (271)
T 1e0c_A          215 LEELGITPDKEIVTHCQTHHRSGLTYLIAKALGY  248 (271)
T ss_dssp             HHHTTCCTTSEEEEECSSSSHHHHHHHHHHHTTC
T ss_pred             HHHcCCCCCCCEEEECCchHHHHHHHHHHHHcCC
Confidence            9988999999999999999999999999999998

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=100.00  E-value=2.5e-47  Score=362.46  Aligned_cols=242  Identities=25%  Similarity=0.416  Sum_probs=209.7

Q ss_pred             CCCCCCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChh-hhhcCCCCCceecCccc-ccccCCCCCCCCCCHHHHHH
Q 018869           70 SVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQ-EYQVAHIPGALFFDVDG-VADRTTNLPHMLPSEEAFAA  147 (349)
Q Consensus        70 ~~~~~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~-~y~~GHIPGAi~ip~~~-l~~~~~~~~~~lp~~~~~~~  147 (349)
                      ++.+...+|+++||++++++++++|||||         +.. +|..||||||+|+|+.. +.+.   ..+++|++++|++
T Consensus        34 ~~~~~~~~is~~~l~~~l~~~~~~iiDvR---------~~~e~y~~gHIpGAi~ip~~~~~~~~---~~~~~~~~~~~~~  101 (318)
T 3hzu_A           34 AYAHPERLVTADWLSAHMGAPGLAIVESD---------EDVLLYDVGHIPGAVKIDWHTDLNDP---RVRDYINGEQFAE  101 (318)
T ss_dssp             TSSSGGGEECHHHHHHHTTCTTEEEEECC---------SSTTSGGGCBCTTEEECCHHHHHBCS---SSSSBCCHHHHHH
T ss_pred             hcCCCCceecHHHHHHhccCCCEEEEECC---------CChhHHhcCcCCCCeEeCchhhhccC---cccCCCCHHHHHH
Confidence            34456789999999999988889999999         444 49999999999999864 3322   3568999999999


Q ss_pred             HHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhc
Q 018869          148 AVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQ  227 (349)
Q Consensus       148 ~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~  227 (349)
                      .++.+|++++++|||||..|..+|.+++|+|+.+||+||++|+||+.+|.++|+|++++.+.                  
T Consensus       102 ~l~~lgi~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~------------------  163 (318)
T 3hzu_A          102 LMDRKGIARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVPT------------------  163 (318)
T ss_dssp             HHHHTTCCTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCCC------------------
T ss_pred             HHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCCC------------------
Confidence            99999999999999999877768999999999999999999999999999999999987531                  


Q ss_pred             CcccCCcceee--ccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCC-----CCCCccccCCCcccCcccccC
Q 018869          228 GQVVGPTTFQT--KFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR-----KGIRSGHVPGSKCIPFPQMLD  300 (349)
Q Consensus       228 ~~~~~~~~~~~--~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~-----~~~~~GHIPGA~~ip~~~l~~  300 (349)
                         ..+.+|..  ..++.++++.+++.+.+++.  +|||+|++.||.|...+|+     .+.+.||||||+|+|+.++++
T Consensus       164 ---~~~~~~~~~~~~~~~~~i~~~el~~~l~~~--~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~  238 (318)
T 3hzu_A          164 ---KTCTGYPVVQRNDAPIRAFRDDVLAILGAQ--PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAAD  238 (318)
T ss_dssp             ---CCCCCCCCCCCCCTTTBCCHHHHHHHTTTS--CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBC
T ss_pred             ---CCCCccccccCCCccccccHHHHHHhhcCC--eEEecCCHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcC
Confidence               23455655  35677889999999998754  8999999999999765543     345679999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHh-CcC
Q 018869          301 ASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFP-VFF  348 (349)
Q Consensus       301 ~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~-~g~  348 (349)
                      .+++|++.++|++++  .+++++++||+||++|.||+.++++|.+ +||
T Consensus       239 ~~g~~~~~~~l~~~~--~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~  285 (318)
T 3hzu_A          239 ESGRFRSREELERLY--DFINPDDQTVVYCRIGERSSHTWFVLTHLLGK  285 (318)
T ss_dssp             TTSCBCCHHHHHHHT--TTCCTTCCCEEECSSSHHHHHHHHHHHHTSCC
T ss_pred             CCCcCCCHHHHHHHh--cCCCCCCcEEEEcCChHHHHHHHHHHHHHcCC
Confidence            999999999999999  4799999999999999999999999997 898

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=100.00  E-value=7.8e-46  Score=346.45  Aligned_cols=245  Identities=29%  Similarity=0.515  Sum_probs=208.5

Q ss_pred             CCCCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCccc-ccccCCCCCCCCCCHHHHHHHHH
Q 018869           72 SPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADRTTNLPHMLPSEEAFAAAVS  150 (349)
Q Consensus        72 ~~~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~-l~~~~~~~~~~lp~~~~~~~~~~  150 (349)
                      .++.++|+++||++++++++++|||||        .+..+|..||||||+|+|+.. +.+   ..++++|+.++|++.++
T Consensus         4 ~~~~~~is~~~l~~~l~~~~~~liDvR--------~~~~e~~~ghIpgA~~ip~~~~~~~---~~~~~~~~~~~~~~~~~   72 (285)
T 1uar_A            4 AHPEVLVSTDWVQEHLEDPKVRVLEVD--------EDILLYDTGHIPGAQKIDWQRDFWD---PVVRDFISEEEFAKLME   72 (285)
T ss_dssp             SCGGGEECHHHHHTTTTCTTEEEEEEC--------SSTTHHHHCBCTTCEEECHHHHHBC---SSSSSBCCHHHHHHHHH
T ss_pred             CCCCceEcHHHHHHhcCCCCEEEEEcC--------CCcchhhcCcCCCCEECCchhhccC---CcccCCCCHHHHHHHHH
Confidence            345678999999999987789999999        125899999999999999975 332   23678999999999999


Q ss_pred             HcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcc
Q 018869          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  230 (349)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (349)
                      .+|++++++|||||..|..++.+++|+|+.+||++|++|+||+.+|.++|+|++++.+.                     
T Consensus        73 ~~gi~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~---------------------  131 (285)
T 1uar_A           73 RLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVPS---------------------  131 (285)
T ss_dssp             HTTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCCC---------------------
T ss_pred             HcCCCCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCCc---------------------
Confidence            99999999999999876657999999999999999999999999999999999886531                     


Q ss_pred             cCCcceee-ccCCccccCHHHHHHHhh---cCCceEEeccCCCcccccCCC-----CCCCCCccccCCCcccCcccccCC
Q 018869          231 VGPTTFQT-KFQPHLIWTLEQVKRNIE---EGTYQLVDARSKARFDGDAPE-----PRKGIRSGHVPGSKCIPFPQMLDA  301 (349)
Q Consensus       231 ~~~~~~~~-~~~~~~~i~~~~v~~~~~---~~~~~lID~R~~~ey~G~~~~-----~~~~~~~GHIPGA~~ip~~~l~~~  301 (349)
                      ..+.+|.. +.++...++.+++.+.++   ..+..|||+|++.||.|...+     ++...+.||||||+|+|+.++.+.
T Consensus       132 ~~~~~~~~~~~~~~~~i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~  211 (285)
T 1uar_A          132 YPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNP  211 (285)
T ss_dssp             CCCCCCCCCCCCGGGEECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCT
T ss_pred             ccCCCcccccCCcceEEcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCccccCHHHhcCC
Confidence            23345655 556678899999999884   234579999999999886443     223345899999999999999988


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHH-hCcC
Q 018869          302 SQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLF-PVFF  348 (349)
Q Consensus       302 ~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~-~~g~  348 (349)
                      +++++++++|++.+.+.|++++++||+||++|.||+.+++.|+ .+||
T Consensus       212 ~~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~  259 (285)
T 1uar_A          212 DGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGY  259 (285)
T ss_dssp             TSCBCCHHHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred             CCcCCCHHHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCC
Confidence            8899999999999999899999999999999999999999999 8998

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=100.00  E-value=1.3e-45  Score=343.55  Aligned_cols=240  Identities=25%  Similarity=0.472  Sum_probs=204.7

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCC-hhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNP-FQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~-~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      .++|++++|++++++++++|||||         + ..+|..||||||+|+|+..+...  ..++++++.+.|++.++.+|
T Consensus         5 ~~~is~~~l~~~l~~~~~~liDvR---------~~~~ey~~ghIpgA~~ip~~~~~~~--~~~~~~~~~~~~~~~~~~~g   73 (277)
T 3aay_A            5 DVLVSADWAESNLHAPKVVFVEVD---------EDTSAYDRDHIAGAIKLDWRTDLQD--PVKRDFVDAQQFSKLLSERG   73 (277)
T ss_dssp             HHEECHHHHHTTTTCTTEEEEEEE---------SSSHHHHHCBSTTCEEEETTTTTBC--SSSSSBCCHHHHHHHHHHHT
T ss_pred             CceEcHHHHHHHhCCCCEEEEEcC---------CChhhHhhCCCCCcEEecccccccC--CCCCCCCCHHHHHHHHHHcC
Confidence            457999999999987789999999         5 78999999999999999764322  23578899999999999999


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCC
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGP  233 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (349)
                      ++++++|||||..|+.++.+++|+|+.+||++|++|+||+.+|.++|+|+++..+.                     ..+
T Consensus        74 i~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~~---------------------~~~  132 (277)
T 3aay_A           74 IANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPVS---------------------RPV  132 (277)
T ss_dssp             CCTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCCC---------------------CCC
T ss_pred             CCCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCCC---------------------cCC
Confidence            99999999999877667999999999999999999999999999999999987531                     223


Q ss_pred             cceeec-cCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCC-----CCCCCCccccCCCcccCcccccCCCCCCCC
Q 018869          234 TTFQTK-FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPE-----PRKGIRSGHVPGSKCIPFPQMLDASQTLLP  307 (349)
Q Consensus       234 ~~~~~~-~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~-----~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~  307 (349)
                      .+|... .+..+.++.+++.+.+++++  |||+|++.||.|....     +....+.||||||+|+||.++.+.++.+++
T Consensus       133 ~~~~~~~~~~~~~~~~~el~~~~~~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~~~~~~  210 (277)
T 3aay_A          133 TSYTASPPDNTIRAFRDEVLAAINVKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANEDGTFKS  210 (277)
T ss_dssp             CCCCCCCCCGGGEECHHHHHHTTTTSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCTTSCBCC
T ss_pred             CCccccCcccchhcCHHHHHHhcCCCC--EEEeCChHHeeeeecccccccccccccCCcCCCceecCHHHhcCCCCcCCC
Confidence            445442 34556789999999887654  9999999999885321     122346799999999999999888889999


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHh-CcC
Q 018869          308 ADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFP-VFF  348 (349)
Q Consensus       308 ~~el~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~-~g~  348 (349)
                      +++|++.+.+.+++++++||+||++|.||+.+++.|++ +||
T Consensus       211 ~~~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~~G~  252 (277)
T 3aay_A          211 DEELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLRELLGH  252 (277)
T ss_dssp             HHHHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHHcCC
Confidence            99999999988999999999999999999999999995 898

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=100.00  E-value=1.2e-44  Score=350.76  Aligned_cols=240  Identities=25%  Similarity=0.493  Sum_probs=195.8

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCccc-cccc--CCCCCCCCCCHHHHHHHHHH
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDG-VADR--TTNLPHMLPSEEAFAAAVSA  151 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~-l~~~--~~~~~~~lp~~~~~~~~~~~  151 (349)
                      .++|+++||++++++  ++|||||+.++.. .+...+|..||||||+|+|+.. +.+.  ...+++++|+.++|+++++.
T Consensus        13 ~~~Is~~el~~~l~~--~~iIDvR~~~~~~-~~~~~ey~~gHIpGAi~ip~~~~l~~~~~~~~~~~~lp~~~~f~~~l~~   89 (373)
T 1okg_A           13 KVFLDPSEVADHLAE--YRIVDCRYSLKIK-DHGSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPXAEFIDWCMA   89 (373)
T ss_dssp             CCEECHHHHTTCGGG--SEEEECCCCSSST-TTTTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred             CcEEcHHHHHHHcCC--cEEEEecCCcccc-ccchhHHhhCcCCCCEEeCchhhhhcccccCCccccCCCHHHHHHHHHH
Confidence            578999999998875  8999999543321 1236799999999999999986 7654  44567899999999999999


Q ss_pred             cCCCCCCcEEEEC-CCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcc
Q 018869          152 LGLENKDGLVVYD-GKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  230 (349)
Q Consensus       152 ~gi~~~~~VVvy~-~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (349)
                      +|++++++||||| ..|.+.+.++||+|+.+|| +|++|+||+.+|.++|+|++++.+.                     
T Consensus        90 ~gi~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~~~~---------------------  147 (373)
T 1okg_A           90 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEPS---------------------  147 (373)
T ss_dssp             TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCCC---------------------
T ss_pred             cCCCCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccCCCC---------------------
Confidence            9999999999999 5555444599999999999 9999999999999999999987532                     


Q ss_pred             cCCc-----ceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCC--CCCCccccCCCcccCccccc--CC
Q 018869          231 VGPT-----TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPR--KGIRSGHVPGSKCIPFPQML--DA  301 (349)
Q Consensus       231 ~~~~-----~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~--~~~~~GHIPGA~~ip~~~l~--~~  301 (349)
                      +.+.     +|..+.++..+  .++|     +++.+|||+|++.||.|+. +|+  .. +.||||||+|+|+.++.  +.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~--~~~v-----~~~~~lIDvR~~~Ef~G~~-~~~~~~~-~~GhIpGAiniP~~~l~~~~~  218 (373)
T 1okg_A          148 SLPRPATHWPFKTAFQHHYL--VDEI-----PPQAIITDARSADRFASTV-RPYAADK-MPGHIEGARNLPYTSHLVTRG  218 (373)
T ss_dssp             SCCCCCCCCCSCSSCCSBCC--GGGS-----CTTCCEEECSCHHHHTCCS-SCCTTCS-SSSCSTTCEECCGGGGEECCS
T ss_pred             cCccccccccccccCChHHH--HHHh-----ccCceEEeCCCHHHccccc-cccccCC-cCccCCCcEEecHHHhhccCC
Confidence            1223     56666655554  4444     4568899999999999977 543  22 28999999999999998  76


Q ss_pred             CCC-CCCHHHHHHHHHHc--CCCC---CCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          302 SQT-LLPADELKKRFEQE--GISL---EKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       302 ~~~-l~~~~el~~~~~~~--~i~~---~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++ ++++++|+++|.+.  ++++   +++||+||++|.||+.++++|+.+||
T Consensus       219 ~~~~~~~~~~l~~~~~~~~~gi~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~  271 (373)
T 1okg_A          219 DGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGL  271 (373)
T ss_dssp             SSCEECCHHHHHHHHHTTCC-----CCCTTSEEECSSSSTHHHHHHHHHHTTS
T ss_pred             CCCccCCHHHHHHHHHhhhcCCCcccCCCCEEEECCchHHHHHHHHHHHHcCC
Confidence            777 99999999999987  7888   99999999999999999999999998

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=100.00  E-value=1.1e-41  Score=335.65  Aligned_cols=245  Identities=26%  Similarity=0.385  Sum_probs=208.3

Q ss_pred             CCCcccHHHHHHhcC--------CCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHH
Q 018869           74 KEPVVSVDWLHANLR--------EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF  145 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~--------~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~  145 (349)
                      ...+|++++++++++        .++++|||+|+.       +..+|..||||||+|+|+..+....   .+.++++++|
T Consensus       122 ~~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~-------~~~e~~~ghIpgA~nip~~~~~~~~---~~~~~~~~~l  191 (423)
T 2wlr_A          122 FEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWG-------APKLYLISHIPGADYIDTNEVESEP---LWNKVSDEQL  191 (423)
T ss_dssp             GGGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESS-------SCSHHHHCBCTTCEEEEGGGTEETT---TTEECCHHHH
T ss_pred             CCcccCHHHHHHHhhccccccccCCCeEEEEecCC-------CchhhccCcCCCcEEcCHHHhccCC---CCCCCCHHHH
Confidence            456899999999887        346899999931       3469999999999999998875421   3578899999


Q ss_pred             HHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHH
Q 018869          146 AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKV  225 (349)
Q Consensus       146 ~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~  225 (349)
                      ++.+..+|++++++||+||..| .+|+++++.|+.+||++|++|+|||.+|...|+|++++.+..               
T Consensus       192 ~~~~~~~gi~~~~~ivvyC~~G-~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~~~~---------------  255 (423)
T 2wlr_A          192 KAMLAKHGIRHDTTVILYGRDV-YAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPK---------------  255 (423)
T ss_dssp             HHHHHHTTCCTTSEEEEECSSH-HHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSSCCC---------------
T ss_pred             HHHHHHcCCCCCCeEEEECCCc-hHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCCCCC---------------
Confidence            9999999999999999999854 589999999999999999999999999999999999864310               


Q ss_pred             hcCcccCCcceeec--cCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcc-------
Q 018869          226 YQGQVVGPTTFQTK--FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFP-------  296 (349)
Q Consensus       226 ~~~~~~~~~~~~~~--~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~-------  296 (349)
                          .....+|...  .++..+++.+++++.+++++.+|||+|++.||.|+.+.+....+.||||||+|+|+.       
T Consensus       256 ----~~~~~~~~~~~~~~~~~~i~~~e~~~~l~~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi~ip~~~~~~~~~  331 (423)
T 2wlr_A          256 ----VKAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGARWGHAGSDSTHME  331 (423)
T ss_dssp             ----CCCCCCCSSCSCSCGGGEECHHHHHTTTTCSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCEECCCCSSTTCCG
T ss_pred             ----CCCCcCcccccCCChhheecHHHHHHHhcCCCceEEecCchhheeeeccCCCCCCcCCCCCCccccccccccccHH
Confidence                0122345443  356778999999998887778999999999999998776666678999999988875       


Q ss_pred             cccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          297 QMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       297 ~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++++.++++++.++|++.+.+.+++++++||+||++|.||+.+++.|+.+||
T Consensus       332 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ivvyC~sG~rs~~aa~~L~~~G~  383 (423)
T 2wlr_A          332 DFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRASETFMYARAMGW  383 (423)
T ss_dssp             GGBCTTSSBCCHHHHHHHHHTTTCCTTSEEEEECSSSHHHHHHHHHHHHTTC
T ss_pred             HHcCCCCcCCCHHHHHHHHHHcCCCCCCcEEEECCcHHHHHHHHHHHHHcCC
Confidence            6777788999999999999888899999999999999999999999999998

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=100.00  E-value=2.8e-39  Score=293.19  Aligned_cols=202  Identities=24%  Similarity=0.401  Sum_probs=170.0

Q ss_pred             CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcc--cccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCC
Q 018869           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVD--GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG  167 (349)
Q Consensus        90 ~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~--~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVvy~~~g  167 (349)
                      ++++|||+|         +..+|..||||||+|+|+.  .+..  ...++++|+.++|++.++.+|+  +++|||||..|
T Consensus         5 ~~~~iiDvR---------~~~ey~~ghIpgAi~ip~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~--~~~ivvyc~~g   71 (230)
T 2eg4_A            5 EDAVLVDTR---------PRPAYEAGHLPGARHLDLSAPKLRL--REEAELKALEGGLTELFQTLGL--RSPVVLYDEGL   71 (230)
T ss_dssp             TTCEEEECS---------CHHHHHHCBCTTCEECCCCSCCCCC--CSHHHHHHHHHHHHHHHHHTTC--CSSEEEECSSS
T ss_pred             CCEEEEECC---------ChhhHhhCcCCCCEECCccchhccc--CCCCCcCCCHHHHHHHHHhcCC--CCEEEEEcCCC
Confidence            468999999         7899999999999999998  5541  2234567777899999999987  78999999877


Q ss_pred             cchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCCcceeeccCCccccC
Q 018869          168 IFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWT  247 (349)
Q Consensus       168 ~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  247 (349)
                      ..+|.+++|+|+ +||+||++|+||   |.+  +|++++.+                     .+.+.+|....++..+++
T Consensus        72 ~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~~~~~---------------------~~~~~~~~~~~~~~~~i~  124 (230)
T 2eg4_A           72 TSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATEKEEP---------------------KPERTEVVAKLRRDWLLT  124 (230)
T ss_dssp             CHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCBCSCC---------------------CCCCCCCCCCCCGGGBCC
T ss_pred             CccHHHHHHHHH-cCCceEEEeCCC---Ccc--CcccCCCC---------------------CcccccceecCCccceeC
Confidence            657999999999 999999999999   877  88877653                     234567777778888999


Q ss_pred             HHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEE
Q 018869          248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV  327 (349)
Q Consensus       248 ~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vi  327 (349)
                      .+++.+     +.+|||+|++.||.|...+|. ..+.||||||+|+|+.++.+.+          +++.+.+++++++||
T Consensus       125 ~~e~~~-----~~~liDvR~~~e~~~~~~~~~-~~~~ghIpgA~~ip~~~~~~~~----------e~~~~~~~~~~~~iv  188 (230)
T 2eg4_A          125 ADEAAR-----HPLLLDVRSPEEFQGKVHPPC-CPRGGRIPGSKNAPLELFLSPE----------GLLERLGLQPGQEVG  188 (230)
T ss_dssp             HHHHHT-----CSCEEECSCHHHHTTSCCCTT-SSSCCBCTTCEECCGGGGGCCT----------THHHHHTCCTTCEEE
T ss_pred             HHHHhh-----CCeEEeCCCHHHcCcccCCCC-CccCCCCCCcEEcCHHHhCChH----------HHHHhcCCCCCCCEE
Confidence            999876     578999999999999776663 4578999999999999987642          145555799999999


Q ss_pred             EEcCChHHHHHHHHHHHhCc
Q 018869          328 TACGTGVTACILALVLFPVF  347 (349)
Q Consensus       328 vyC~~G~rA~~~~~~L~~~g  347 (349)
                      +||++|.||+.+++.|+.+|
T Consensus       189 ~~C~~G~rs~~a~~~L~~~G  208 (230)
T 2eg4_A          189 VYCHSGARSAVAFFVLRSLG  208 (230)
T ss_dssp             EECSSSHHHHHHHHHHHHTT
T ss_pred             EEcCChHHHHHHHHHHHHcC
Confidence            99999999999999999988

>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A

Probab=100.00  E-value=9.4e-40  Score=321.79  Aligned_cols=215  Identities=13%  Similarity=0.121  Sum_probs=178.3

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      .++||++||++++++++++|||+|+......+....+|..||||||+|||++.+         .+|+.++|+++++.+||
T Consensus         3 ~~~is~~~L~~~l~~~~~~ilD~r~~~~~~~~~~~~~y~~gHIPgAv~~~~~~l---------~lp~~~~f~~~~~~lgi   73 (423)
T 2wlr_A            3 SAELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASWL---------DKMSTEQLNAWIKQHNL   73 (423)
T ss_dssp             -CCCCSCBCHHHHHHTTCEEEECSCHHHHHTCCSSTTCCCSBCTTCEECCGGGG---------GGCCHHHHHHHHHHTTC
T ss_pred             ccccCHHHHHHHhCCCCeEEEECCCcccccccccccccccCCCCCCccCCHHHh---------cCCCHHHHHHHHHHcCC
Confidence            467999999999987789999999421100011224788999999999999855         27899999999999999


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCCc
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT  234 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (349)
                      +++++|||||+.+  .|+|+||+|+.+||+||++|+|||   .++|+ ++...                           
T Consensus        74 ~~~~~vVvy~~~~--~a~r~~w~l~~~G~~~V~vl~Gg~---~~~g~-~~~~~---------------------------  120 (423)
T 2wlr_A           74 KTDAPVALYGNDK--DVDAVKTRLQKAGLTHISILSDAL---SEPSR-LQKLP---------------------------  120 (423)
T ss_dssp             CTTSCEEEESCHH--HHHHHHHHHHHTTCCCEEEBTTTT---SCGGG-CBCCT---------------------------
T ss_pred             CCCCeEEEECCCC--CHHHHHHHHHHcCCceeEeccchh---hcCCC-cccCC---------------------------
Confidence            9999999998764  699999999999999999999985   44555 22111                           


Q ss_pred             ceeeccCCccccCHHHHHHHhh--------cCCceEEecc--CCCcccccCCCCCCCCCccccCCCcccCcccccC-CCC
Q 018869          235 TFQTKFQPHLIWTLEQVKRNIE--------EGTYQLVDAR--SKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLD-ASQ  303 (349)
Q Consensus       235 ~~~~~~~~~~~i~~~~v~~~~~--------~~~~~lID~R--~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~-~~~  303 (349)
                            +...+++.+++.+.++        +++.+|||+|  ++.||           +.||||||+|+|+.++.+ .++
T Consensus       121 ------~~~~~i~~~~l~~~~~~~~~~~~~~~~~~liDvR~~~~~e~-----------~~ghIpgA~nip~~~~~~~~~~  183 (423)
T 2wlr_A          121 ------HFEQLVYPQWLHDLQQGKEVTAKPAGDWKVIEAAWGAPKLY-----------LISHIPGADYIDTNEVESEPLW  183 (423)
T ss_dssp             ------TGGGEECHHHHHHHHTTCCCTTCCSSCEEEEEEESSSCSHH-----------HHCBCTTCEEEEGGGTEETTTT
T ss_pred             ------CCCcccCHHHHHHHhhccccccccCCCeEEEEecCCCchhh-----------ccCcCCCcEEcCHHHhccCCCC
Confidence                  1123678888888776        3468899999  99999           789999999999998865 457


Q ss_pred             CCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          304 TLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       304 ~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      .++++++|++.|.+.|++++++||+||++|.||+.+++.|+.+||
T Consensus       184 ~~~~~~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~G~  228 (423)
T 2wlr_A          184 NKVSDEQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYAGV  228 (423)
T ss_dssp             EECCHHHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred             CCCCHHHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence            899999999999999999999999999999999999999999998

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=100.00  E-value=4.5e-36  Score=304.04  Aligned_cols=205  Identities=19%  Similarity=0.208  Sum_probs=170.3

Q ss_pred             CCCcccHHHHHHhcCC-CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           74 KEPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~-~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      ..+.|+++||++++++ ++++|||||         +..+|..||||||+|||++.                 |...+..+
T Consensus         5 ~~~~is~~~l~~~l~~~~~~~liDvR---------~~~e~~~ghIpgAv~ip~~~-----------------~~~~~~~l   58 (539)
T 1yt8_A            5 QIAVRTFHDIRAALLARRELALLDVR---------EEDPFAQAHPLFAANLPLSR-----------------LELEIHAR   58 (539)
T ss_dssp             -CEEECHHHHHHHHHHTCCBEEEECS---------CHHHHTTSBCTTCEECCGGG-----------------HHHHHHHH
T ss_pred             cCcccCHHHHHHHHhCCCCeEEEECC---------CHHHHhcCcCCCCEECCHHH-----------------HHHHHHhh
Confidence            3567999999999864 379999999         78999999999999999863                 55667778


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccC
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVG  232 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (349)
                      +++++++|||||..|. ++.+++|+|+.+||+||++|+||+.+|+++|+|++++.+..   .  +.              
T Consensus        59 ~~~~~~~iVvyc~~g~-~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~~~---~--~~--------------  118 (539)
T 1yt8_A           59 VPRRDTPITVYDDGEG-LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDVNVP---S--KA--------------  118 (539)
T ss_dssp             SCCTTSCEEEECSSSS-HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSSSHH---H--HH--------------
T ss_pred             CCCCCCeEEEEECCCC-hHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCCcCc---C--cc--------------
Confidence            8888999999998776 89999999999999999999999999999999999876421   0  00              


Q ss_pred             CcceeeccCCccccCHHHHHHHhhc-CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHH
Q 018869          233 PTTFQTKFQPHLIWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADEL  311 (349)
Q Consensus       233 ~~~~~~~~~~~~~i~~~~v~~~~~~-~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el  311 (349)
                      ..+|.........++.+++...+++ ++.+|||+|+++||           ..||||||+|+|+.++.            
T Consensus       119 ~g~~~~~~~~~~~it~~~l~~~l~~~~~~~llDvR~~~e~-----------~~ghIpgA~~ip~~~l~------------  175 (539)
T 1yt8_A          119 FGELVEAERHTPSLAAEEVQALLDARAEAVILDARRFDEY-----------QTMSIPGGISVPGAELV------------  175 (539)
T ss_dssp             HHHHHHHHHCCCEECHHHHHHHHHTTCSEEEEECSCHHHH-----------HHSBCTTCEECCGGGHH------------
T ss_pred             hhhhhhhhcCCCccCHHHHHHHHhCCCCcEEEeCCCHHHH-----------hcCcCCCCEeCCHHHHH------------
Confidence            0112222233457899999998875 56889999999999           56999999999998764            


Q ss_pred             HHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          312 KKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       312 ~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                       ..+.+.+++++++||+||++|.||+++++.|+.+||
T Consensus       176 -~~~~~l~~~~d~~iV~~C~~g~rs~~~~~~L~~~G~  211 (539)
T 1yt8_A          176 -LRVAELAPDPRTRVIVNCAGRTRSIIGTQSLLNAGI  211 (539)
T ss_dssp             -HHHHHHCCSTTSEEEEECSSSHHHHHHHHHHHHTTC
T ss_pred             -HHHHhhCCCCCCeEEEECCCChHHHHHHHHHHHcCC
Confidence             234555789999999999999999999999999998

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=100.00  E-value=5.3e-34  Score=284.50  Aligned_cols=181  Identities=21%  Similarity=0.247  Sum_probs=158.2

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      .++|+++||++++++ + +|||+|         +.++|..||||||+|+|++.                .|+++++.++ 
T Consensus       272 ~~~is~~~l~~~l~~-~-~iiD~R---------~~~~y~~ghIpGA~~i~~~~----------------~~~~~~~~l~-  323 (474)
T 3tp9_A          272 RVDLPPERVRAWREG-G-VVLDVR---------PADAFAKRHLAGSLNIPWNK----------------SFVTWAGWLL-  323 (474)
T ss_dssp             ECCCCGGGHHHHHHT-S-EEEECS---------CHHHHHHSEETTCEECCSST----------------THHHHHHHHC-
T ss_pred             CceeCHHHHHHHhCC-C-EEEECC---------ChHHHhccCCCCeEEECcch----------------HHHHHHHhcC-
Confidence            457999999999977 4 999999         78999999999999999863                5788889888 


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCCc
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPT  234 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (349)
                      +++++|||||..+  .++++||+|+.+||++|++|.+|+.+|.++|+++++..                           
T Consensus       324 ~~~~~vvvy~~~~--~~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~~---------------------------  374 (474)
T 3tp9_A          324 PADRPIHLLAADA--IAPDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASYA---------------------------  374 (474)
T ss_dssp             CSSSCEEEECCTT--THHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECCE---------------------------
T ss_pred             CCCCeEEEEECCC--cHHHHHHHHHHcCCcceEEecCcHHHHHhccccccccc---------------------------
Confidence            8899999999876  48889999999999999986669999999888776532                           


Q ss_pred             ceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHH
Q 018869          235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKR  314 (349)
Q Consensus       235 ~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~  314 (349)
                                .++.+++.+.+++++.+|||+|++.||           ..||||||+|+|+.++.+.             
T Consensus       375 ----------~i~~~~l~~~~~~~~~~lvDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~-------------  420 (474)
T 3tp9_A          375 ----------NVSPDEVRGALAQQGLWLLDVRNVDEW-----------AGGHLPQAHHIPLSKLAAH-------------  420 (474)
T ss_dssp             ----------EECHHHHHHTTTTTCCEEEECSCHHHH-----------HHCBCTTCEECCHHHHTTT-------------
T ss_pred             ----------ccCHHHHHHHhcCCCcEEEECCCHHHH-----------hcCcCCCCEECCHHHHHHH-------------
Confidence                      367899999888778999999999999           6799999999999876532             


Q ss_pred             HHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          315 FEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       315 ~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +.  +++++++||+||++|.||+.+++.|+.+||
T Consensus       421 ~~--~l~~~~~vvv~C~~G~ra~~a~~~L~~~G~  452 (474)
T 3tp9_A          421 IH--DVPRDGSVCVYCRTGGRSAIAASLLRAHGV  452 (474)
T ss_dssp             GG--GSCSSSCEEEECSSSHHHHHHHHHHHHHTC
T ss_pred             Hh--cCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence            22  378999999999999999999999999998

>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2

Probab=99.97  E-value=5.4e-32  Score=274.10  Aligned_cols=188  Identities=19%  Similarity=0.221  Sum_probs=157.0

Q ss_pred             CCcccHHHHHHhcCC--CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           75 EPVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~--~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      .+.|++++|++++++  ++.+|||||         ++.+|..||||||+|+|+.++                 .+.+..+
T Consensus       264 ~~~is~~~l~~~~~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l-----------------~~~~~~~  317 (539)
T 1yt8_A          264 VERLDLAGLAQWQDEHDRTTYLLDVR---------TPEEYEAGHLPGSRSTPGGQL-----------------VQETDHV  317 (539)
T ss_dssp             CEEECHHHHHHHHHCTTSCEEEEECS---------CHHHHHHCBCTTCEECCHHHH-----------------HHSHHHH
T ss_pred             CceECHHHHHHHHhCCCCCeEEEECC---------CHHHHhcCCCCCCEeCCHHHH-----------------HHHHHhh
Confidence            357999999998865  368999999         889999999999999998643                 3333333


Q ss_pred             -CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCC-CHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcc
Q 018869          153 -GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDG-GLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQV  230 (349)
Q Consensus       153 -gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~G-G~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (349)
                       ++ ++++|||||..|. ++..+++.|+.+|| +|++|+| |+.+|..+|+|+++.+..                     
T Consensus       318 ~~~-~~~~ivv~c~~g~-rs~~aa~~L~~~G~-~v~~l~G~G~~~w~~~g~p~~~~~~~---------------------  373 (539)
T 1yt8_A          318 ASV-RGARLVLVDDDGV-RANMSASWLAQMGW-QVAVLDGLSEADFSERGAWSAPLPRQ---------------------  373 (539)
T ss_dssp             CCS-BTCEEEEECSSSS-HHHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSCCCCCCCC---------------------
T ss_pred             cCC-CCCeEEEEeCCCC-cHHHHHHHHHHcCC-eEEEecCCChHHHHHhhccccCCCCC---------------------
Confidence             33 6799999998775 78888888999999 8999999 999999999998775321                     


Q ss_pred             cCCcceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHH
Q 018869          231 VGPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADE  310 (349)
Q Consensus       231 ~~~~~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~e  310 (349)
                                .....++.+++.+.+++++.+|||+|++.||           +.||||||+|+|..+             
T Consensus       374 ----------~~~~~i~~~~l~~~l~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~-------------  419 (539)
T 1yt8_A          374 ----------PRADTIDPTTLADWLGEPGTRVLDFTASANY-----------AKRHIPGAAWVLRSQ-------------  419 (539)
T ss_dssp             ----------CCCCEECHHHHHHHTTSTTEEEEECSCHHHH-----------HHCBCTTCEECCGGG-------------
T ss_pred             ----------CcCCccCHHHHHHHhcCCCeEEEEeCCHHHh-----------hcCcCCCchhCCHHH-------------
Confidence                      1223689999999998778999999999999           779999999998754             


Q ss_pred             HHHHHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          311 LKKRFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       311 l~~~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      |.+.+.+  ++++++||+||++|.||+.++..|+.+||
T Consensus       420 l~~~l~~--l~~~~~ivv~C~sG~rs~~aa~~L~~~G~  455 (539)
T 1yt8_A          420 LKQALER--LGTAERYVLTCGSSLLARFAVAEVQALSG  455 (539)
T ss_dssp             HHHHHHH--HCCCSEEEEECSSSHHHHHHHHHHHHHHC
T ss_pred             HHHHHHh--CCCCCeEEEEeCCChHHHHHHHHHHHcCC
Confidence            4455554  68899999999999999999999999997

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.94  E-value=1.6e-27  Score=237.21  Aligned_cols=155  Identities=13%  Similarity=0.180  Sum_probs=63.5

Q ss_pred             CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCCcc
Q 018869           90 PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIF  169 (349)
Q Consensus        90 ~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVvy~~~g~~  169 (349)
                      ++++|||+|         +..+|..||||||+|+|++.                .|+++++.++ +++++||+||+ ++ 
T Consensus       295 ~~~~ilD~R---------~~~~y~~gHIpGAv~ip~~~----------------~~~~~~~~~~-~~~~~vvly~~-~~-  346 (466)
T 3r2u_A          295 TNRLTFDLR---------SKEAYHGGHIEGTINIPYDK----------------NFINQIGWYL-NYDQEINLIGD-YH-  346 (466)
T ss_dssp             CCSEEEECS---------CHHHHHHSCCTTCEECCSST----------------THHHHHTTTC-CTTSCEEEESC-HH-
T ss_pred             CCeEEEECC---------CHHHHhhCCCCCcEECCccH----------------HHHHHHHhcc-CCCCeEEEEEC-Cc-
Confidence            468999999         78999999999999999863                4666666544 88999999998 43 


Q ss_pred             hHHHHHHHHHHcCCCceeE-eCCCHHHHHhCCCCcccCCCcchhHhhhhhHHHHHHHhcCcccCCcceeeccCCccccCH
Q 018869          170 SAARVWWMFRVFGHDRVWV-LDGGLPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTL  248 (349)
Q Consensus       170 ~a~r~~~~L~~~G~~~V~~-L~GG~~~W~~~G~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  248 (349)
                      .+.++||.|+.+||++|.. ++|+...|.         .                                   .  +  
T Consensus       347 ~a~~a~~~L~~~G~~~v~~~l~g~~~~~~---------~-----------------------------------~--~--  378 (466)
T 3r2u_A          347 LVSKATHTLQLIGYDDIAGYQLPQSKIQT---------R-----------------------------------S--I--  378 (466)
T ss_dssp             HHHHHHHHHHTTTCCCEEEEECCC--------------------------------------------------------
T ss_pred             hHHHHHHHhhhhhcccccccccCcccccH---------H-----------------------------------H--H--
Confidence            7999999999999999997 666432221         0                                   0  0  


Q ss_pred             HHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEE
Q 018869          249 EQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVT  328 (349)
Q Consensus       249 ~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~viv  328 (349)
                        +.+.+++++.+|||+|++.||           ..||||||+|+|+.++.+             .+.+  ++++++||+
T Consensus       379 --~~~~~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l~~-------------~~~~--l~~~~~iv~  430 (466)
T 3r2u_A          379 --HSEDITGNESHILDVRNDNEW-----------NNGHLSQAVHVPHGKLLE-------------TDLP--FNKNDVIYV  430 (466)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --HHHHHhCCCcEEEEeCCHHHH-----------hcCcCCCCEECCHHHHHH-------------HHhh--CCCCCeEEE
Confidence              334444556889999999999           689999999999977642             2332  778999999


Q ss_pred             EcCChHHHHHHHHHHHhCcC
Q 018869          329 ACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       329 yC~~G~rA~~~~~~L~~~g~  348 (349)
                      ||++|.||+.++..|+.+||
T Consensus       431 ~C~~G~rs~~a~~~L~~~G~  450 (466)
T 3r2u_A          431 HCQSGIRSSIAIGILEHKGY  450 (466)
T ss_dssp             --------------------
T ss_pred             ECCCChHHHHHHHHHHHcCC
Confidence            99999999999999999998

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}

Probab=99.89  E-value=2.9e-23  Score=173.30  Aligned_cols=116  Identities=16%  Similarity=0.252  Sum_probs=101.8

Q ss_pred             CCCcccHHHHHHhcC--CCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 018869           74 KEPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~--~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~  151 (349)
                      ....|+++++.++++  +++++|||||         +..+|..||||||+|+|+..+..      ....++++|++.++.
T Consensus        21 ~~~~is~~el~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAinip~~~l~~------~~~~~~~~~~~~~~~   85 (139)
T 3d1p_A           21 NIQSYSFEDMKRIVGKHDPNVVLVDVR---------EPSEYSIVHIPASINVPYRSHPD------AFALDPLEFEKQIGI   85 (139)
T ss_dssp             CCEECCHHHHHHHHHHTCTTEEEEECS---------CHHHHHHCCCTTCEECCTTTCTT------GGGSCHHHHHHHHSS
T ss_pred             CcceecHHHHHHHHhCCCCCeEEEECc---------CHHHHhCCCCCCcEEcCHHHhhh------hccCCHHHHHHHHhc
Confidence            456799999999886  3579999999         88999999999999999987743      234667889999988


Q ss_pred             cCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCccc
Q 018869          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      .+++++++|||||..|. ++.++++.|+.+||+||++|+||+.+|.+.|+|+..
T Consensus        86 ~~~~~~~~ivvyC~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~  138 (139)
T 3d1p_A           86 PKPDSAKELIFYCASGK-RGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD  138 (139)
T ss_dssp             CCCCTTSEEEEECSSSH-HHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred             cCCCCCCeEEEECCCCc-hHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence            88999999999998765 899999999999999999999999999999998753

>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}

Probab=99.88  E-value=1.2e-22  Score=160.10  Aligned_cols=98  Identities=17%  Similarity=0.278  Sum_probs=85.1

Q ss_pred             CcccHHHHHHhc-CCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           76 PVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        76 ~lIs~~~L~~~l-~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      +.|++++|++++ ++++++|||||         ++.+|..||||||+|+|+..+....                 .  .+
T Consensus         2 ~~is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~~~-----------------~--~l   53 (100)
T 3foj_A            2 ESITVTELKEKILDANPVNIVDVR---------TDQETAMGIIPGAETIPMNSIPDNL-----------------N--YF   53 (100)
T ss_dssp             CEECHHHHHHGGGSSSCCEEEECS---------CHHHHTTCBCTTCEECCGGGGGGCG-----------------G--GS
T ss_pred             CccCHHHHHHHHhcCCCcEEEECC---------CHHHHhcCcCCCCEECCHHHHHHHH-----------------H--hC
Confidence            358999999998 45679999999         7899999999999999998765421                 1  24


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCc
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv  203 (349)
                      +++++||+||..|. +|.++++.|+.+|| +|++|+||+.+|.++|+|+
T Consensus        54 ~~~~~ivvyC~~g~-rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv  100 (100)
T 3foj_A           54 NDNETYYIICKAGG-RSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH  100 (100)
T ss_dssp             CTTSEEEEECSSSH-HHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred             CCCCcEEEEcCCCc-hHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence            67899999998765 89999999999999 9999999999999999986

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}

Probab=99.87  E-value=2.6e-22  Score=160.49  Aligned_cols=102  Identities=19%  Similarity=0.256  Sum_probs=87.7

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      .+.|++++|++++++  ++|||||         +..+|..||||||+|+|+..                 |.+.+..  +
T Consensus         3 ~~~is~~el~~~l~~--~~iiDvR---------~~~e~~~ghIpgA~~ip~~~-----------------l~~~~~~--l   52 (108)
T 3gk5_A            3 YRSINAADLYENIKA--YTVLDVR---------EPFELIFGSIANSINIPISE-----------------LREKWKI--L   52 (108)
T ss_dssp             CCEECHHHHHHTTTT--CEEEECS---------CHHHHTTCBCTTCEECCHHH-----------------HHHHGGG--S
T ss_pred             ccEeCHHHHHHHHcC--CEEEECC---------CHHHHhcCcCCCCEEcCHHH-----------------HHHHHHh--C
Confidence            356999999999876  8999999         78999999999999999864                 3444443  4


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      +++++||+||..|. ++.++++.|+.+|| +|++|+||+.+|.++|+|+++.++
T Consensus        53 ~~~~~ivvyC~~G~-rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~  104 (108)
T 3gk5_A           53 ERDKKYAVICAHGN-RSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH  104 (108)
T ss_dssp             CTTSCEEEECSSSH-HHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred             CCCCeEEEEcCCCc-HHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence            78899999998665 79999999999999 999999999999999999998764

>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A

Probab=99.87  E-value=1.8e-22  Score=160.11  Aligned_cols=99  Identities=22%  Similarity=0.410  Sum_probs=84.6

Q ss_pred             cccHHHHHHhcCC-CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 018869           77 VVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (349)
Q Consensus        77 lIs~~~L~~~l~~-~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~  155 (349)
                      .||+++|++.+.+ ++++|||||         ++.+|..||||||+|+|++.+.+..                 .  .++
T Consensus         3 ~Is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~~~-----------------~--~l~   54 (103)
T 3iwh_A            3 SITTDELKNKLLESKPVQIVDVR---------TDEETAMGYIPNAKLIPMDTIPDNL-----------------N--SFN   54 (103)
T ss_dssp             EECHHHHHHGGGSSSCCEEEECS---------CHHHHTTCBCTTCEECCGGGGGGCG-----------------G--GCC
T ss_pred             CcCHHHHHHHHhCCCCeEEEECC---------ChhHHhcCccCCcccCcccchhhhh-----------------h--hhc
Confidence            4899999998754 468999999         7899999999999999998765431                 1  246


Q ss_pred             CCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCccc
Q 018869          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       156 ~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      ++++||+||..|. +|..++..|+..||+++ .|.||+.+|.++|+|+++
T Consensus        55 ~~~~ivv~C~~G~-rS~~aa~~L~~~G~~~~-~l~GG~~~W~~~g~pves  102 (103)
T 3iwh_A           55 KNEIYYIVCAGGV-RSAKVVEYLEANGIDAV-NVEGGMHAWGDEGLEIKS  102 (103)
T ss_dssp             TTSEEEEECSSSS-HHHHHHHHHHTTTCEEE-EETTHHHHHCSSSCBCCC
T ss_pred             CCCeEEEECCCCH-HHHHHHHHHHHcCCCEE-EecChHHHHHHCCCccee
Confidence            7899999998765 89999999999999655 799999999999999986

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A

Probab=99.87  E-value=1.6e-22  Score=161.60  Aligned_cols=102  Identities=21%  Similarity=0.291  Sum_probs=89.7

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      .+.|+++++++++++++.+|||||         +..+|..||||||+|+|+.                 +|.+.+..  +
T Consensus         4 ~~~i~~~~l~~~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~-----------------~l~~~~~~--l   55 (108)
T 1gmx_A            4 FECINVADAHQKLQEKEAVLVDIR---------DPQSFAMGHAVQAFHLTND-----------------TLGAFMRD--N   55 (108)
T ss_dssp             CEEECHHHHHHHHHTTCCEEEECS---------CHHHHHHCEETTCEECCHH-----------------HHHHHHHH--S
T ss_pred             ccccCHHHHHHHHhCCCCEEEEcC---------CHHHHHhCCCccCEeCCHH-----------------HHHHHHHh--c
Confidence            356999999999877679999999         7899999999999999986                 34555655  4


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccC
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESS  206 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~  206 (349)
                      +++++|||||..|. ++.++++.|+.+||+||++|+||+.+|.+. +|++++
T Consensus        56 ~~~~~ivvyc~~g~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~  105 (108)
T 1gmx_A           56 DFDTPVMVMCYHGN-SSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVA  105 (108)
T ss_dssp             CTTSCEEEECSSSS-HHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEE
T ss_pred             CCCCCEEEEcCCCc-hHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCcccc
Confidence            78899999998776 899999999999999999999999999998 998764

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3

Probab=99.86  E-value=2.9e-22  Score=165.25  Aligned_cols=114  Identities=19%  Similarity=0.195  Sum_probs=93.3

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ..+.|+++++.++++ ++++|||||         +..+|..||||||+|||+..+..     ...+++.+.+++.+.  .
T Consensus        16 ~~~~is~~e~~~~l~-~~~~lIDvR---------~~~e~~~ghIpgAinip~~~~~~-----~~~~~~~~~~~~~~~--~   78 (129)
T 1tq1_A           16 VPSSVSVTVAHDLLL-AGHRYLDVR---------TPEEFSQGHACGAINVPYMNRGA-----SGMSKNTDFLEQVSS--H   78 (129)
T ss_dssp             CCEEEEHHHHHHHHH-HTCCEEEES---------CHHHHHHCCBTTBEECCSCCCST-----TTCCCTTTHHHHHTT--T
T ss_pred             CCcccCHHHHHHHhc-CCCEEEECC---------CHHHHhcCCCCCcEECcHhhccc-----ccccCCHHHHHHHHh--h
Confidence            456799999999886 468999999         88999999999999999976532     123444444455444  3


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCccc
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      ++++++|||||..|. +|.++++.|+.+||+||++|+||+.+|..+|+|+++
T Consensus        79 l~~~~~ivvyC~~G~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~  129 (129)
T 1tq1_A           79 FGQSDNIIVGCQSGG-RSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA  129 (129)
T ss_dssp             CCTTSSEEEEESSCS-HHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC-
T ss_pred             CCCCCeEEEECCCCc-HHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCCC
Confidence            678899999998775 899999999999999999999999999999999863

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A

Probab=99.86  E-value=3.1e-22  Score=167.73  Aligned_cols=104  Identities=25%  Similarity=0.405  Sum_probs=88.7

Q ss_pred             cccHHHHHHhcCC--CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           77 VVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        77 lIs~~~L~~~l~~--~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      +||+++|++++.+  ++++|||||         +..+|..||||||+|+|+..+.                 +.+. .++
T Consensus         1 mIs~~el~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~-----------------~~~~-~~l   53 (141)
T 3ilm_A            1 MSDAHVLKSRLEWGEPAFTILDVR---------DRSTYNDGHIMGAMAMPIEDLV-----------------DRAS-SSL   53 (141)
T ss_dssp             -CCHHHHHHHHHHSCSCEEEEECS---------CHHHHHHCEETTCEECCGGGHH-----------------HHHH-TTS
T ss_pred             CCCHHHHHHHHhcCCCCEEEEECC---------CHHHHhCCCCCCCEEcCHHHHH-----------------HHHH-hcC
Confidence            4899999999864  358999999         8899999999999999997542                 2221 357


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      +++++|||||..|. +|.++++.|+.+||+||++|+||+.+|.++|+|+++..+
T Consensus        54 ~~~~~ivvyC~~g~-rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~  106 (141)
T 3ilm_A           54 EKSRDIYVYGAGDE-QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIE  106 (141)
T ss_dssp             CTTSEEEEECSSHH-HHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred             CCCCeEEEEECCCh-HHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence            88999999998664 899999999999999999999999999999999998763

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}

Probab=99.86  E-value=3.9e-22  Score=166.22  Aligned_cols=112  Identities=18%  Similarity=0.198  Sum_probs=89.4

Q ss_pred             CCcccHHHHHHhcC--CCCcEEEEeccCCCCCCCCChhhhhc-CCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 018869           75 EPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQV-AHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (349)
Q Consensus        75 ~~lIs~~~L~~~l~--~~~~~iIDvR~~~~~~~~~~~~~y~~-GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~  151 (349)
                      ...|++++|+++++  +++++|||||         +..+|.. ||||||+|+|+..+........ ...          .
T Consensus        21 ~~~is~~~l~~~l~~~~~~~~liDvR---------~~~e~~~~ghIpgA~~ip~~~l~~~~~~~~-~~~----------~   80 (139)
T 2hhg_A           21 IETLTTADAIALHKSGASDVVIVDIR---------DPREIERDGKIPGSFSCTRGMLEFWIDPQS-PYA----------K   80 (139)
T ss_dssp             SEEECHHHHHHHHHTTCTTEEEEECS---------CHHHHHHHCCCTTCEECCGGGHHHHHCTTS-TTC----------C
T ss_pred             cCccCHHHHHHHHhccCCCeEEEECC---------CHHHHHhCCCCCCeEECChHHHHHhcCccc-hhh----------h
Confidence            45799999999987  5679999999         7899999 9999999999987543211000 000          1


Q ss_pred             cCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                      .+++++++|||||..|. +|.++++.|+.+||+||++|+||+.+|.++|+|++++.
T Consensus        81 ~~~~~~~~ivvyC~~G~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  135 (139)
T 2hhg_A           81 PIFQEDKKFVFYCAGGL-RSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWA  135 (139)
T ss_dssp             GGGGSSSEEEEECSSSH-HHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC---
T ss_pred             ccCCCCCeEEEECCCCh-HHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCC
Confidence            23578899999998775 89999999999999999999999999999999998875

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A

Probab=99.86  E-value=1.4e-21  Score=164.32  Aligned_cols=105  Identities=22%  Similarity=0.318  Sum_probs=90.7

Q ss_pred             CcccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        76 ~lIs~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ..|++++|++++.++  +++|||||         +..+|..||||||+|+|+..+....                  ..+
T Consensus        16 ~~is~~el~~~l~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~~~~------------------~~~   68 (144)
T 3nhv_A           16 YETDIADLSIDIKKGYEGIIVVDVR---------DAEAYKECHIPTAISIPGNKINEDT------------------TKR   68 (144)
T ss_dssp             TEEEHHHHHHHHHTTCCSEEEEECS---------CHHHHHHCBCTTCEECCGGGCSTTT------------------TTT
T ss_pred             cccCHHHHHHHHHcCCCCEEEEECc---------CHHHHhcCCCCCCEECCHHHHhHHH------------------Hhh
Confidence            458999999998764  69999999         7899999999999999998765311                  124


Q ss_pred             CCCCCcEEEECCCCc-chHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          154 LENKDGLVVYDGKGI-FSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       154 i~~~~~VVvy~~~g~-~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      ++++++|||||..|. .+|.++++.|+.+|| +|++|+||+.+|.++|+|++++.+
T Consensus        69 l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~  123 (144)
T 3nhv_A           69 LSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLG  123 (144)
T ss_dssp             CCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSG
T ss_pred             CCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCC
Confidence            678899999998774 589999999999999 699999999999999999998763

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3

Probab=99.86  E-value=1.1e-21  Score=163.58  Aligned_cols=106  Identities=18%  Similarity=0.282  Sum_probs=91.4

Q ss_pred             CCcccHHHHHHhcC-CCCcEEEEeccCCCCCCCCChhhhhc-CC--CCCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 018869           75 EPVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQV-AH--IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (349)
Q Consensus        75 ~~lIs~~~L~~~l~-~~~~~iIDvR~~~~~~~~~~~~~y~~-GH--IPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~  150 (349)
                      ...|++++++++++ +++++|||||         ++.+|.. ||  ||||+|+|+..+..               ...+ 
T Consensus        22 ~~~is~~el~~~l~~~~~~~liDVR---------~~~E~~~~gh~~IpgAinip~~~l~~---------------~~~~-   76 (137)
T 1qxn_A           22 MVMLSPKDAYKLLQENPDITLIDVR---------DPDELKAMGKPDVKNYKHMSRGKLEP---------------LLAK-   76 (137)
T ss_dssp             SEEECHHHHHHHHHHCTTSEEEECC---------CHHHHHHTCEECCSSEEECCTTTSHH---------------HHHH-
T ss_pred             CcccCHHHHHHHHhcCCCeEEEECC---------CHHHHHhcCCcCCCCCEEcchHHhhh---------------HHhh-
Confidence            45699999999987 6679999999         7899999 99  99999999876431               0112 


Q ss_pred             HcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                       .+++++++|||||..|. +|.++++.|+.+||+||++|+||+.+|.++|+|++++.
T Consensus        77 -~~l~~~~~ivvyC~~G~-rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~  131 (137)
T 1qxn_A           77 -SGLDPEKPVVVFCKTAA-RAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRS  131 (137)
T ss_dssp             -HCCCTTSCEEEECCSSS-CHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCC
T ss_pred             -ccCCCCCeEEEEcCCCc-HHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCccccc
Confidence             25788999999998776 79999999999999999999999999999999998765

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A

Probab=99.85  E-value=6.6e-22  Score=157.57  Aligned_cols=100  Identities=29%  Similarity=0.457  Sum_probs=77.3

Q ss_pred             HHHHHhcC--CCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869           81 DWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKD  158 (349)
Q Consensus        81 ~~L~~~l~--~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~  158 (349)
                      ++|++++.  +++++|||||         +..+|..||||||+|+|+..+..                ....  .+++++
T Consensus         1 eel~~~l~~~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l~~----------------~~~~--~l~~~~   53 (106)
T 3hix_A            1 MVLKSRLEWGEPAFTILDVR---------DRSTYNDGHIMGAMAMPIEDLVD----------------RASS--SLEKSR   53 (106)
T ss_dssp             ------------CCEEEECS---------CHHHHHTCEETTCEECCGGGHHH----------------HHHH--HSCTTS
T ss_pred             ChHHHHHHcCCCCeEEEECC---------CHHHHhcCcCCCCEeCCHHHHHH----------------HHHh--cCCCCC
Confidence            35677776  3469999999         78999999999999999975421                1112  256889


Q ss_pred             cEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          159 GLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       159 ~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      +|||||..|. ++.+++++|+.+||+||++|+||+.+|.++|+|+++.++
T Consensus        54 ~ivvyc~~g~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~  102 (106)
T 3hix_A           54 DIYVYGAGDE-QTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH  102 (106)
T ss_dssp             CEEEECSSHH-HHHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred             eEEEEECCCC-hHHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence            9999998765 799999999999999999999999999999999988763

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}

Probab=99.84  E-value=6.5e-22  Score=158.66  Aligned_cols=100  Identities=17%  Similarity=0.268  Sum_probs=84.9

Q ss_pred             CcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 018869           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (349)
Q Consensus        76 ~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~  155 (349)
                      ..||+++|    .+++++|||||         +..+|..||||||+|+|+..+                 .+.+...+++
T Consensus         5 ~~is~~el----~~~~~~liDvR---------~~~e~~~ghIpgAi~ip~~~l-----------------~~~~~~~~~~   54 (110)
T 2k0z_A            5 YAISLEEV----NFNDFIVVDVR---------ELDEYEELHLPNATLISVNDQ-----------------EKLADFLSQH   54 (110)
T ss_dssp             TEEETTTC----CGGGSEEEEEE---------CHHHHHHSBCTTEEEEETTCH-----------------HHHHHHHHSC
T ss_pred             eeeCHHHh----ccCCeEEEECC---------CHHHHhcCcCCCCEEcCHHHH-----------------HHHHHhcccC
Confidence            45777776    24478999999         789999999999999998754                 2334445678


Q ss_pred             CCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       156 ~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                      ++++|||||..|. +|.++++.|+.+||++ ++|+||+.+|.++|+|++++.
T Consensus        55 ~~~~ivvyC~~G~-rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~  104 (110)
T 2k0z_A           55 KDKKVLLHCRAGR-RALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD  104 (110)
T ss_dssp             SSSCEEEECSSSH-HHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred             CCCEEEEEeCCCc-hHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence            9999999998765 8999999999999999 999999999999999998865

>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X

Probab=99.84  E-value=7.8e-21  Score=175.66  Aligned_cols=118  Identities=26%  Similarity=0.382  Sum_probs=102.9

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhh--------cCCCCCceecCcccccccCCCCCCCCCCHHHH
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ--------VAHIPGALFFDVDGVADRTTNLPHMLPSEEAF  145 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~--------~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~  145 (349)
                      ....|+++++++++++++++|||||         +..+|.        .||||||+|+|+..+.+...   ..+.+ ++|
T Consensus       145 ~~~~i~~~~l~~~l~~~~~~liDvR---------~~~e~~g~~~~~~~~ghIpgA~~ip~~~~~~~~~---~~~~~-~~l  211 (271)
T 1e0c_A          145 DEPTASRDYLLGRLGAADLAIWDAR---------SPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPSR---ALRIR-TDI  211 (271)
T ss_dssp             STTBCCHHHHHHHTTCTTEEEEECS---------CHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGGG---TTEEC-TTH
T ss_pred             ccccccHHHHHHHhcCCCcEEEEcC---------ChhhcCCccCCCCcCCcCCCceeccHHHhCCCCC---CCCCH-HHH
Confidence            4567999999999988789999999         788999        99999999999998765421   12233 789


Q ss_pred             HHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhC-CCCccc
Q 018869          146 AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS-GYDVES  205 (349)
Q Consensus       146 ~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~-G~pv~~  205 (349)
                      ++.+..++++++++||+||..|. +|+++++.|+.+||+||++|+|||.+|.+. |+|+++
T Consensus       212 ~~~~~~~~~~~~~~ivvyC~~G~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~  271 (271)
T 1e0c_A          212 AGRLEELGITPDKEIVTHCQTHH-RSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL  271 (271)
T ss_dssp             HHHHHHTTCCTTSEEEEECSSSS-HHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred             HHHHHHcCCCCCCCEEEECCchH-HHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence            99999999999999999998775 899999999999999999999999999988 999864

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A

Probab=99.82  E-value=7.8e-21  Score=155.61  Aligned_cols=103  Identities=19%  Similarity=0.311  Sum_probs=85.7

Q ss_pred             CcccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhh-hcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           76 PVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEY-QVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        76 ~lIs~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y-~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      ..|++++|.+++.++  +++|||||         +..+| ..||||||+|+|+..                 |.+.+.. 
T Consensus        15 ~~is~~el~~~l~~~~~~~~liDvR---------~~~e~~~~ghIpgA~nip~~~-----------------l~~~~~~-   67 (124)
T 3flh_A           15 LYIDHHTVLADMQNATGKYVVLDVR---------NAPAQVKKDQIKGAIAMPAKD-----------------LATRIGE-   67 (124)
T ss_dssp             TEECHHHHHHHHHHTCCCEEEEECC---------CSCHHHHCCEETTCEECCHHH-----------------HHHHGGG-
T ss_pred             ceecHHHHHHHHHcCCCCEEEEECC---------CHHHHHhcCcCCCCEECCHHH-----------------HHHHHhc-
Confidence            469999999988653  49999999         67787 999999999999864                 3344433 


Q ss_pred             CCCCCCcEEEECCCCcch-HHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          153 GLENKDGLVVYDGKGIFS-AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~-a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                       ++++++|||||..|... |.++++.|+.+||+ |++|+||+.+|...|+|+.+..
T Consensus        68 -l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~~  121 (124)
T 3flh_A           68 -LDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHHH  121 (124)
T ss_dssp             -SCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC--
T ss_pred             -CCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCccc
Confidence             57889999999887633 89999999999996 9999999999999999987754

>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2

Probab=99.82  E-value=2.3e-20  Score=173.80  Aligned_cols=118  Identities=22%  Similarity=0.353  Sum_probs=103.1

Q ss_pred             CCcccHHHHHHhcC---CCCcEEEEeccCCCCCCCCChhhhh----------------cCCCCCceecCcccccccCCCC
Q 018869           75 EPVVSVDWLHANLR---EPDLKVLDASWYMPDEQRNPFQEYQ----------------VAHIPGALFFDVDGVADRTTNL  135 (349)
Q Consensus        75 ~~lIs~~~L~~~l~---~~~~~iIDvR~~~~~~~~~~~~~y~----------------~GHIPGAi~ip~~~l~~~~~~~  135 (349)
                      ..+|++++|++++.   ..+..|||||         +..+|.                .||||||+|+|+..+.+..   
T Consensus       145 ~~~i~~~el~~~l~~~~~~~~~liDvR---------~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~---  212 (285)
T 1uar_A          145 SIRAYRDDVLEHIIKVKEGKGALVDVR---------SPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD---  212 (285)
T ss_dssp             GGEECHHHHHHHHHHHHTTSEEEEECS---------CHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTT---
T ss_pred             ceEEcHHHHHHHHhhcccCCCcEEEcC---------CccceeeeccccccccccccccCCcCCCccccCHHHhcCCC---
Confidence            46799999999883   1245799999         778887                8999999999999876542   


Q ss_pred             CCCCCCHHHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHH-HcCCCceeEeCCCHHHHH-hCCCCcccC
Q 018869          136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFR-VFGHDRVWVLDGGLPRWR-ASGYDVESS  206 (349)
Q Consensus       136 ~~~lp~~~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~-~~G~~~V~~L~GG~~~W~-~~G~pv~~~  206 (349)
                       ..++++++|++.+..+|++++++|||||..|. +|+++++.|+ .+||+||++|+|||.+|. ..|+|++++
T Consensus       213 -~~~~~~~~l~~~~~~~g~~~~~~ivvyC~~G~-rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g  283 (285)
T 1uar_A          213 -GTFKSAEELRALYEPLGITKDKDIVVYCRIAE-RSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG  283 (285)
T ss_dssp             -SCBCCHHHHHHHHGGGTCCTTSEEEEECSSHH-HHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred             -CcCCCHHHHHHHHHHcCCCCCCCEEEECCchH-HHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence             36788999999999999999999999998765 8999999999 999999999999999998 799999875

>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A

Probab=99.82  E-value=3.7e-20  Score=171.61  Aligned_cols=115  Identities=23%  Similarity=0.386  Sum_probs=100.5

Q ss_pred             CcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhc----------------CCCCCceecCcccccccCCCCCCCC
Q 018869           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------------AHIPGALFFDVDGVADRTTNLPHML  139 (349)
Q Consensus        76 ~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~----------------GHIPGAi~ip~~~l~~~~~~~~~~l  139 (349)
                      ..++++++.+++++++  |||||         +..+|..                ||||||+|+|+..+...    .+.+
T Consensus       144 ~~~~~~el~~~~~~~~--liDvR---------~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~----~~~~  208 (277)
T 3aay_A          144 IRAFRDEVLAAINVKN--LIDVR---------SPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSRAANE----DGTF  208 (277)
T ss_dssp             GEECHHHHHHTTTTSE--EEECS---------CHHHHHTSCCC-----CCCCSCCSBCTTCEECCGGGGBCT----TSCB
T ss_pred             hhcCHHHHHHhcCCCC--EEEeC---------ChHHeeeeecccccccccccccCCcCCCceecCHHHhcCC----CCcC
Confidence            3588999999987655  99999         7888875                99999999999876543    2467


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHH-cCCCceeEeCCCHHHHHh-CCCCcccC
Q 018869          140 PSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV-FGHDRVWVLDGGLPRWRA-SGYDVESS  206 (349)
Q Consensus       140 p~~~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~-~G~~~V~~L~GG~~~W~~-~G~pv~~~  206 (349)
                      +++++|++.+..+|++++++||+||..|. +|+++++.|+. +||+||++|+|||.+|.+ .|+|++++
T Consensus       209 ~~~~~l~~~~~~~~~~~~~~iv~yC~~G~-rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g  276 (277)
T 3aay_A          209 KSDEELAKLYADAGLDNSKETIAYCRIGE-RSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG  276 (277)
T ss_dssp             CCHHHHHHHHHHHTCCTTSCEEEECSSHH-HHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred             CCHHHHHHHHHHcCCCCCCCEEEEcCcHH-HHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence            88899999999999999999999998765 79999999985 999999999999999998 99999875

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}

Probab=99.82  E-value=1.2e-20  Score=159.25  Aligned_cols=117  Identities=12%  Similarity=0.105  Sum_probs=88.5

Q ss_pred             CCcccHHHHHHhcCC-CCcEEEEeccCCCCCCCCChhhhhc-CCC------CCceecCcccccccCCCCCCCCCC-HHHH
Q 018869           75 EPVVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQV-AHI------PGALFFDVDGVADRTTNLPHMLPS-EEAF  145 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~-~~~~iIDvR~~~~~~~~~~~~~y~~-GHI------PGAi~ip~~~l~~~~~~~~~~lp~-~~~~  145 (349)
                      ...|+++++++++++ ++++|||||         +..+|.. |||      |||+|+|+.. .+..     ..+. .+++
T Consensus         4 ~~~is~~el~~~l~~~~~~~liDVR---------~~~e~~~~ghi~~~g~~pgAv~ip~~~-~~~~-----~~~~~~~~l   68 (148)
T 2fsx_A            4 AGDITPLQAWEMLSDNPRAVLVDVR---------CEAEWRFVGVPDLSSLGREVVYVEWAT-SDGT-----HNDNFLAEL   68 (148)
T ss_dssp             SEEECHHHHHHHHHHCTTCEEEECS---------CHHHHHHTCEECCGGGTCCCEECCSBC-TTSC-----BCTTHHHHH
T ss_pred             cccCCHHHHHHHHhcCCCeEEEECC---------CHHHHHhcCCCccccCCCCcEEeeeec-cccc-----cCHHHHHHH
Confidence            346999999998874 579999999         7899997 999      9999999986 2110     1111 3455


Q ss_pred             HHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCH------------HHHHhCCCCcccCC
Q 018869          146 AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL------------PRWRASGYDVESSA  207 (349)
Q Consensus       146 ~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~------------~~W~~~G~pv~~~~  207 (349)
                      .+.+...|++++++|||||..|. +|.++++.|+.+||+||++|+||+            .+|+++|+|+++..
T Consensus        69 ~~~l~~~~~~~~~~ivvyC~~G~-rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~  141 (148)
T 2fsx_A           69 RDRIPADADQHERPVIFLCRSGN-RSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR  141 (148)
T ss_dssp             HHHCC-------CCEEEECSSSS-THHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred             HHHHhhccCCCCCEEEEEcCCCh-hHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence            56566668899999999998776 799999999999999999999999            68888888887653

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1

Probab=99.82  E-value=2e-20  Score=158.70  Aligned_cols=110  Identities=21%  Similarity=0.331  Sum_probs=88.8

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ..+.|++++|.+++++++++|||||         +.++|..||||||+|||+..+..             .+.+++..  
T Consensus        26 ~~~~Is~~el~~~l~~~~~~lIDvR---------~~~ey~~ghIpgAinip~~~l~~-------------~~~~l~~~--   81 (152)
T 1t3k_A           26 SISYITSTQLLPLHRRPNIAIIDVR---------DEERNYDGHIAGSLHYASGSFDD-------------KISHLVQN--   81 (152)
T ss_dssp             SSEEECTTTTTTCCCCTTEEEEEES---------CSHHHHSSCCCSSEEECCSSSST-------------THHHHHHT--
T ss_pred             CCceECHHHHHHHhcCCCEEEEECC---------ChhhccCccCCCCEECCHHHHHH-------------HHHHHHHh--
Confidence            4567999999998877789999999         77899999999999999986532             34455544  


Q ss_pred             CCCCCcEEEECC-CCcchHHHHHHHH--------HHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          154 LENKDGLVVYDG-KGIFSAARVWWMF--------RVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       154 i~~~~~VVvy~~-~g~~~a~r~~~~L--------~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      ++++++|||||. .|. ++..++..|        +.+||+||++|+||+.+|.++|+|+++..+
T Consensus        82 ~~~~~~iVvyC~~~G~-rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~  144 (152)
T 1t3k_A           82 VKDKDTLVFHSALSQV-RGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE  144 (152)
T ss_dssp             CCSCCEEEESSSCCSS-SHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred             cCCCCEEEEEcCCCCc-chHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCC
Confidence            367889999998 554 565555544        448999999999999999999999988653

>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=99.81  E-value=1.4e-20  Score=146.48  Aligned_cols=92  Identities=21%  Similarity=0.230  Sum_probs=74.0

Q ss_pred             cccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCC
Q 018869           77 VVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLEN  156 (349)
Q Consensus        77 lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~  156 (349)
                      .|+++++++++++ +.+|||||         +..+|..||||||+|+|+..+....                   ..+++
T Consensus         3 ~is~~~l~~~~~~-~~~liDvR---------~~~e~~~ghi~gAi~ip~~~l~~~~-------------------~~l~~   53 (94)
T 1wv9_A            3 KVRPEELPALLEE-GVLVVDVR---------PADRRSTPLPFAAEWVPLEKIQKGE-------------------HGLPR   53 (94)
T ss_dssp             EECGGGHHHHHHT-TCEEEECC---------CC--CCSCCSSCCEECCHHHHTTTC-------------------CCCCS
T ss_pred             cCCHHHHHHHHHC-CCEEEECC---------CHHHHhcccCCCCEECCHHHHHHHH-------------------HhCCC
Confidence            4889999988875 78999999         7889999999999999998764321                   12457


Q ss_pred             CCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCC
Q 018869          157 KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (349)
Q Consensus       157 ~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G  200 (349)
                       ++||+||..|. ++.++++.|+.+||+ |++|+||+.+|.++|
T Consensus        54 -~~ivvyC~~g~-rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G   94 (94)
T 1wv9_A           54 -RPLLLVCEKGL-LSQVAALYLEAEGYE-AMSLEGGLQALTQGK   94 (94)
T ss_dssp             -SCEEEECSSSH-HHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred             -CCEEEEcCCCC-hHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence             89999998776 799999999999998 999999999998765

>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}

Probab=99.80  E-value=5.7e-20  Score=172.88  Aligned_cols=116  Identities=18%  Similarity=0.255  Sum_probs=102.8

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhh-----------hcCCCCCceecCcccccccCCCCCCCCCCH
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-----------QVAHIPGALFFDVDGVADRTTNLPHMLPSE  142 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y-----------~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~  142 (349)
                      +..+++++++++++++++.+|||||         ++++|           ..||||||+|+|+.++.+..    ..+.+.
T Consensus       173 ~~~~i~~~e~~~~~~~~~~~liDvR---------~~~ef~G~~~~p~~~~~~GhIpGAiniP~~~l~~~~----~~~~~~  239 (302)
T 3olh_A          173 PAFIKTYEDIKENLESRRFQVVDSR---------ATGRFRGTEPEPRDGIEPGHIPGTVNIPFTDFLSQE----GLEKSP  239 (302)
T ss_dssp             GGGEECHHHHHHHHHHCCSEEEECS---------CHHHHHTSSCCSSTTCCCCCCTTCEECCGGGGBCSS----SCBCCH
T ss_pred             ccceecHHHHHHhhcCCCcEEEecC---------CHHHccccccCCCcCCcCccCCCceecCHHHhcCCC----CccCCH
Confidence            4568999999998877789999999         78899           89999999999999876542    356778


Q ss_pred             HHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCc
Q 018869          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (349)
Q Consensus       143 ~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv  203 (349)
                      +++++.+...+++++++||+||..|. +|+.++..|+.+||++|++|+|||.+|.+.|+|.
T Consensus       240 ~~l~~~~~~~~~~~~~~iv~yC~sG~-rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~  299 (302)
T 3olh_A          240 EEIRHLFQEKKVDLSKPLVATCGSGV-TACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE  299 (302)
T ss_dssp             HHHHHHHHHTTCCTTSCEEEECSSSS-TTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred             HHHHHHHHhcCCCCCCCEEEECCChH-HHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence            99999999999999999999998776 7889999999999999999999999999988774

>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2

Probab=99.80  E-value=9.4e-20  Score=169.23  Aligned_cols=117  Identities=26%  Similarity=0.375  Sum_probs=94.9

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhh-----------hcCCCCCceecCcccccccCCCCCCCCCCH
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY-----------QVAHIPGALFFDVDGVADRTTNLPHMLPSE  142 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y-----------~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~  142 (349)
                      ....|+++++.+++++++.+|||||         +..+|           ..||||||+|+|+..+...     ..+.+.
T Consensus       150 ~~~~i~~~e~~~~~~~~~~~liDvR---------~~~e~~G~~~~~~~~~~~ghIpgA~nip~~~~~~~-----~~~~~~  215 (280)
T 1urh_A          150 PEAVVKVTDVLLASHENTAQIIDAR---------PAARFNAEVDEPRPGLRRGHIPGALNVPWTELVRE-----GELKTT  215 (280)
T ss_dssp             GGGBCCHHHHHHHHHHTCSEEEECS---------CHHHHSSCCCC----CCSSSCTTCEECCGGGGBSS-----SSBCCH
T ss_pred             cccEEcHHHHHHHhcCCCcEEEeCC---------chhhcccccCCCCCCCcCccCCCceEeeHHHhhcC-----CccCCH
Confidence            4457999999999877779999999         78899           6899999999999987651     245678


Q ss_pred             HHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh-CCCCccc
Q 018869          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVES  205 (349)
Q Consensus       143 ~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~-~G~pv~~  205 (349)
                      +++.+.+...+++++++|||||..|. +|..++..|+.+||+||++|+|||.+|.+ .++|+++
T Consensus       216 ~~l~~~~~~~~~~~~~~ivv~C~~G~-rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~  278 (280)
T 1urh_A          216 DELDAIFFGRGVSYDKPIIVSCGSGV-TAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEP  278 (280)
T ss_dssp             HHHHHHHHTTTCCSSSCEEEECCSSS-THHHHHHHHHHTTCSSCEEECCSCCC-----------
T ss_pred             HHHHHHHHHcCCCCCCCEEEECChHH-HHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCcee
Confidence            89999999999999999999998776 79999999999999999999999999987 5999875

>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A

Probab=99.79  E-value=1.5e-19  Score=169.28  Aligned_cols=120  Identities=18%  Similarity=0.228  Sum_probs=104.9

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhh------------hcCCCCCceecCcccccccCCCCCCCCCC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEY------------QVAHIPGALFFDVDGVADRTTNLPHMLPS  141 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y------------~~GHIPGAi~ip~~~l~~~~~~~~~~lp~  141 (349)
                      ....|+++++.+++++++.+|||||         +..+|            ..||||||+|||+..+.+..    ..+.+
T Consensus       158 ~~~~i~~~e~~~~~~~~~~~liDvR---------~~~e~~G~~~~~~~~~~~~ghIpgA~nip~~~l~~~~----~~~~~  224 (296)
T 1rhs_A          158 RSLLKTYEQVLENLESKRFQLVDSR---------AQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTED----GFEKS  224 (296)
T ss_dssp             GGGEECHHHHHHHHHHCCSEEEECS---------CHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTT----SCBCC
T ss_pred             cceEEcHHHHHHHhcCCCceEEeCC---------chhhcccccCCcccCCCcCccCCCCEeecHHHhcCCC----CcCCC
Confidence            3468999999998876678999999         78899            89999999999999876532    24557


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh-CCCCcccCC
Q 018869          142 EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESSA  207 (349)
Q Consensus       142 ~~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~-~G~pv~~~~  207 (349)
                      .+++++.+...+++++++|||||..|. +|+.++..|+.+||+||++|+|||.+|.. .++|++++.
T Consensus       225 ~~~l~~~~~~~~~~~~~~ivv~C~sG~-rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~  290 (296)
T 1rhs_A          225 PEELRAMFEAKKVDLTKPLIATCRKGV-TACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQ  290 (296)
T ss_dssp             HHHHHHHHHHTTCCTTSCEEEECSSSS-THHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBT
T ss_pred             HHHHHHHHHHcCCCCCCCEEEECCcHH-HHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCC
Confidence            789999999889999999999998776 79999999999999999999999999987 899998764

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}

Probab=99.78  E-value=9e-20  Score=149.12  Aligned_cols=110  Identities=20%  Similarity=0.160  Sum_probs=83.0

Q ss_pred             cccHHHHHHhcCCC-CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHH----HHH
Q 018869           77 VVSVDWLHANLREP-DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA----VSA  151 (349)
Q Consensus        77 lIs~~~L~~~l~~~-~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~----~~~  151 (349)
                      .||+++|++++.++ +++|||||         ++.+|..||||||+|+|+..+......      ....+.+.    ...
T Consensus         2 ~is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~------~~~~~~~~l~~~~~~   66 (127)
T 3i2v_A            2 RVSVTDYKRLLDSGAFHLLLDVR---------PQVEVDICRLPHALHIPLKHLERRDAE------SLKLLKEAIWEEKQG   66 (127)
T ss_dssp             EECHHHHHHHHHHTCCCEEEECS---------CHHHHHHCCCTTSEECCHHHHHTTCHH------HHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHhCCCCeEEEECC---------CHHHhhheecCCceeCChHHHhhhhhh------hHHHHHHHHhhhccc
Confidence            38999999998754 58999999         789999999999999999876543110      01112222    233


Q ss_pred             cCCCCCCcEEEECCCCcchHHHHHHHHHHc------CCCceeEeCCCHHHHHhCCCC
Q 018869          152 LGLENKDGLVVYDGKGIFSAARVWWMFRVF------GHDRVWVLDGGLPRWRASGYD  202 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~------G~~~V~~L~GG~~~W~~~G~p  202 (349)
                      .+++++++|||||..|. ++..+++.|+.+      |+.+|++|+||+.+|.++..|
T Consensus        67 ~~~~~~~~ivv~C~~G~-rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~  122 (127)
T 3i2v_A           67 TQEGAAVPIYVICKLGN-DSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDG  122 (127)
T ss_dssp             C---CCEEEEEECSSSS-HHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCT
T ss_pred             ccCCCCCeEEEEcCCCC-cHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCC
Confidence            45667779999998776 788999999888      688999999999999976544

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1

Probab=99.78  E-value=1.4e-19  Score=153.25  Aligned_cols=115  Identities=19%  Similarity=0.359  Sum_probs=87.9

Q ss_pred             CCCcccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCccccc-----ccCCCCCCCCCCHHHHH
Q 018869           74 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVA-----DRTTNLPHMLPSEEAFA  146 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~-----~~~~~~~~~lp~~~~~~  146 (349)
                      ....|++++|+++++++  +++|||||         +..+|..||||||+|+|+..+.     .....+...+|+.+..+
T Consensus        14 ~~~~is~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~   84 (154)
T 1hzm_A           14 MAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRD   84 (154)
T ss_dssp             CSSBSCCCCHHHHHHHCSSSCEEECCS---------TTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHH
T ss_pred             cccccCHHHHHHHHhCCCCCEEEEEcC---------CHHHHhhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHH
Confidence            45679999999988765  78999999         7899999999999999998753     11123445677654433


Q ss_pred             HHHHHcCCCCCCcEEEECCCCcch------HHHHHHHHHHc---CCCceeEeCCCHHHHHhCCCC
Q 018869          147 AAVSALGLENKDGLVVYDGKGIFS------AARVWWMFRVF---GHDRVWVLDGGLPRWRASGYD  202 (349)
Q Consensus       147 ~~~~~~gi~~~~~VVvy~~~g~~~------a~r~~~~L~~~---G~~~V~~L~GG~~~W~~~G~p  202 (349)
                      .+ .  +++++++|||||+.|...      +.+++|+|+.+   ||+ |++|+||+.+|.+. +|
T Consensus        85 ~~-~--~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~-~p  144 (154)
T 1hzm_A           85 RF-T--RRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE-FS  144 (154)
T ss_dssp             HH-H--HSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH-HC
T ss_pred             HH-h--ccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH-Ch
Confidence            33 2  356789999999877643      36778889877   998 99999999999874 44

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A

Probab=99.78  E-value=1.2e-19  Score=138.34  Aligned_cols=79  Identities=19%  Similarity=0.258  Sum_probs=70.7

Q ss_pred             CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCCcch
Q 018869           91 DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFS  170 (349)
Q Consensus        91 ~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVvy~~~g~~~  170 (349)
                      +++|||+|         ++.+|..||||||+|+|+.                 +|.+.+..++++++++||+||..|. +
T Consensus         1 ~~~liDvR---------~~~e~~~ghIpgA~~ip~~-----------------~l~~~~~~l~~~~~~~ivv~C~~g~-r   53 (85)
T 2jtq_A            1 AEHWIDVR---------VPEQYQQEHVQGAINIPLK-----------------EVKERIATAVPDKNDTVKVYCNAGR-Q   53 (85)
T ss_dssp             CEEEEECS---------CHHHHTTEEETTCEECCHH-----------------HHHHHHHHHCCCTTSEEEEEESSSH-H
T ss_pred             CCEEEECC---------CHHHHHhCCCCCCEEcCHH-----------------HHHHHHHHhCCCCCCcEEEEcCCCc-h
Confidence            46899999         7899999999999999985                 4566777888899999999998765 8


Q ss_pred             HHHHHHHHHHcCCCceeEeCCCHHHHH
Q 018869          171 AARVWWMFRVFGHDRVWVLDGGLPRWR  197 (349)
Q Consensus       171 a~r~~~~L~~~G~~~V~~L~GG~~~W~  197 (349)
                      |.++++.|+.+||++|++| |||.+|.
T Consensus        54 s~~aa~~L~~~G~~~v~~l-GG~~~w~   79 (85)
T 2jtq_A           54 SGQAKEILSEMGYTHVENA-GGLKDIA   79 (85)
T ss_dssp             HHHHHHHHHHTTCSSEEEE-EETTTCC
T ss_pred             HHHHHHHHHHcCCCCEEec-cCHHHHh
Confidence            9999999999999999999 9999994

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}

Probab=99.78  E-value=2.9e-19  Score=147.22  Aligned_cols=110  Identities=16%  Similarity=0.247  Sum_probs=80.8

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCC----------------CCCCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT----------------NLPHM  138 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~----------------~~~~~  138 (349)
                      ...|+++++.+   +++++|||||         +..+|..||||||+|+|+..+.....                .....
T Consensus         4 ~~~i~~~el~~---~~~~~iiDvR---------~~~e~~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (134)
T 3g5j_A            4 MSVIKIEKALK---LDKVIFVDVR---------TEGEYEEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYV   71 (134)
T ss_dssp             -CEECHHHHTT---CTTEEEEECS---------CHHHHHHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ccccCHHHHHh---cCCcEEEEcC---------CHHHHhcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccc
Confidence            34689999876   5579999999         78999999999999999965321000                00000


Q ss_pred             CCCHHHHHHHHHHcCCCCC-CcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhC
Q 018869          139 LPSEEAFAAAVSALGLENK-DGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (349)
Q Consensus       139 lp~~~~~~~~~~~~gi~~~-~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~  199 (349)
                      .+..++|.+.+..+  +++ ++|||||..++.+|.+++++|+.+|| +|++|+||+.+|.+.
T Consensus        72 ~~~~~~~~~~~~~~--~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~  130 (134)
T 3g5j_A           72 SYKLKDIYLQAAEL--ALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNF  130 (134)
T ss_dssp             GGGHHHHHHHHHHH--HTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHH
T ss_pred             cccHHHHHHHHHHh--ccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHH
Confidence            11223455555543  567 89999995344589999999999999 999999999999863

>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A

Probab=99.77  E-value=2e-18  Score=163.41  Aligned_cols=117  Identities=21%  Similarity=0.281  Sum_probs=100.5

Q ss_pred             CCCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhc----------------CCCCCceecCcccccccCCCCC
Q 018869           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------------AHIPGALFFDVDGVADRTTNLP  136 (349)
Q Consensus        73 ~~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~----------------GHIPGAi~ip~~~l~~~~~~~~  136 (349)
                      ....+|+++++++++++.  +|||||         +..+|..                ||||||+|+|+..+.+..    
T Consensus       176 ~~~~~i~~~el~~~l~~~--~liDvR---------~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~niP~~~~~~~~----  240 (318)
T 3hzu_A          176 DAPIRAFRDDVLAILGAQ--PLIDVR---------SPEEYTGKRTHMPDYPEEGALRAGHIPTAVHIPWGKAADES----  240 (318)
T ss_dssp             CTTTBCCHHHHHHHTTTS--CEEECS---------CHHHHHTSCSSCTTSCSCSCSSCSBCTTCEECCGGGGBCTT----
T ss_pred             CccccccHHHHHHhhcCC--eEEecC---------CHHHhcccccCccccccccCCcCcCCCCeeecCHHHhcCCC----
Confidence            345679999999998764  899999         7899998                999999999998876542    


Q ss_pred             CCCCCHHHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHH-cCCCceeEeCCCHHHHHh-CCCCcccCC
Q 018869          137 HMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRV-FGHDRVWVLDGGLPRWRA-SGYDVESSA  207 (349)
Q Consensus       137 ~~lp~~~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~-~G~~~V~~L~GG~~~W~~-~G~pv~~~~  207 (349)
                      +.+.+.+++++.+  .+++++++||+||..|. +|+.++..|+. +||+||++|+|||.+|.. .|+|++++.
T Consensus       241 g~~~~~~~l~~~~--~~l~~~~~ivvyC~sG~-rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~  310 (318)
T 3hzu_A          241 GRFRSREELERLY--DFINPDDQTVVYCRIGE-RSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGE  310 (318)
T ss_dssp             SCBCCHHHHHHHT--TTCCTTCCCEEECSSSH-HHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSS
T ss_pred             CcCCCHHHHHHHh--cCCCCCCcEEEEcCChH-HHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            3466778888888  57899999999998775 89999999986 999999999999999995 799999975

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A

Probab=99.75  E-value=4.1e-19  Score=150.32  Aligned_cols=120  Identities=18%  Similarity=0.296  Sum_probs=85.4

Q ss_pred             CcccHHHHHHhcCC--CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHH--HHHHHH
Q 018869           76 PVVSVDWLHANLRE--PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF--AAAVSA  151 (349)
Q Consensus        76 ~lIs~~~L~~~l~~--~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~--~~~~~~  151 (349)
                      +-|+++||++++++  ++++|||||         +..+|..||||||+|||+..+...... ...+ ..+.+  .+....
T Consensus         4 ~~Is~~~l~~~l~~~~~~~~iiDvR---------~~~ey~~gHIpgAinip~~~l~~~~~~-~~~~-~~~~ll~~~~~~~   72 (153)
T 2vsw_A            4 TQIVTERLVALLESGTEKVLLIDSR---------PFVEYNTSHILEAININCSKLMKRRLQ-QDKV-LITELIQHSAKHK   72 (153)
T ss_dssp             EEECHHHHHHHHTSTTCCEEEEECS---------CHHHHHHCEETTCEECCCCHHHHHHHH-TTSS-CHHHHHHHSCSSC
T ss_pred             ccccHHHHHHHHhcCCCCEEEEECC---------CHHHhccCccCCCeeeChHHHHHhhhh-cCCc-CHHHhcCchhhhh
Confidence            45999999999973  578999999         789999999999999999875211000 0011 11111  111233


Q ss_pred             cCCCCCCcEEEECCCCcchHHHH------HHHHHHc--CCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          152 LGLENKDGLVVYDGKGIFSAARV------WWMFRVF--GHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~r~------~~~L~~~--G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                      ++++++++|||||..|. ++..+      +++|+.+  ||++|++|+||+.+|.+.+.++.++.
T Consensus        73 ~~~~~~~~iVvyc~~g~-~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~  135 (153)
T 2vsw_A           73 VDIDCSQKVVVYDQSSQ-DVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGK  135 (153)
T ss_dssp             CCCCTTSEEEEECSSCC-CGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC-
T ss_pred             hccCCCCeEEEEeCCCC-cccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCC
Confidence            56788999999998776 34333      6777755  99999999999999998776666543

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A

Probab=99.75  E-value=2.1e-18  Score=143.01  Aligned_cols=110  Identities=14%  Similarity=0.107  Sum_probs=88.5

Q ss_pred             CcccHHHHHHhcC-CCCcEEEEeccCCCCCCCCChhhhhcCC-C------CCceecCcccccccCCCCCCCCCCHHHHHH
Q 018869           76 PVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAH-I------PGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (349)
Q Consensus        76 ~lIs~~~L~~~l~-~~~~~iIDvR~~~~~~~~~~~~~y~~GH-I------PGAi~ip~~~l~~~~~~~~~~lp~~~~~~~  147 (349)
                      ..|+++++.+++. +++.+|||||         ++.||..+| +      |||+|||+..+.            ...|.+
T Consensus         5 ~~is~~e~~~~l~~~~~~~liDVR---------~~~E~~~~~~~~~~g~~~ga~~ip~~~~~------------~~~~~~   63 (134)
T 1vee_A            5 SSGSAKNAYTKLGTDDNAQLLDIR---------ATADFRQVGSPNIKGLGKKAVSTVYNGED------------KPGFLK   63 (134)
T ss_dssp             CBCCHHHHHHHHHHCTTEEEEECS---------CHHHHHHTCEECCTTTSCCCEECCCCGGG------------HHHHHH
T ss_pred             CccCHHHHHHHHHhCCCeEEEEcC---------CHHHHhhcCCCcccccCCceEEeeccccc------------ChhHHH
Confidence            4599999999886 4578999999         788998633 3      799999986531            123444


Q ss_pred             HHHHcC-CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCH---HHHHhCCCCcccCC
Q 018869          148 AVSALG-LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL---PRWRASGYDVESSA  207 (349)
Q Consensus       148 ~~~~~g-i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~---~~W~~~G~pv~~~~  207 (349)
                      .+.... ++++++|||||..|. +|..++..|+.+||+||++|.||+   .+|.++|+|++...
T Consensus        64 ~l~~~~~~~~~~~ivv~C~sG~-RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~  126 (134)
T 1vee_A           64 KLSLKFKDPENTTLYILDKFDG-NSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPK  126 (134)
T ss_dssp             HHHTTCSCGGGCEEEEECSSST-THHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCC
T ss_pred             HHHHHhCCCCCCEEEEEeCCCC-cHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCC
Confidence            444332 378899999998876 799999999999999999999999   78999999998764

>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A

Probab=99.73  E-value=5e-18  Score=153.24  Aligned_cols=102  Identities=22%  Similarity=0.337  Sum_probs=87.8

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhc----------CCCCCceecCcccccccCCCCCCCCCCHH
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQV----------AHIPGALFFDVDGVADRTTNLPHMLPSEE  143 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~----------GHIPGAi~ip~~~l~~~~~~~~~~lp~~~  143 (349)
                      ...+|+++++.+     +.+|||+|         +..+|..          ||||||+|+|+..+.+..           
T Consensus       119 ~~~~i~~~e~~~-----~~~liDvR---------~~~e~~~~~~~~~~~~~ghIpgA~~ip~~~~~~~~-----------  173 (230)
T 2eg4_A          119 RDWLLTADEAAR-----HPLLLDVR---------SPEEFQGKVHPPCCPRGGRIPGSKNAPLELFLSPE-----------  173 (230)
T ss_dssp             GGGBCCHHHHHT-----CSCEEECS---------CHHHHTTSCCCTTSSSCCBCTTCEECCGGGGGCCT-----------
T ss_pred             ccceeCHHHHhh-----CCeEEeCC---------CHHHcCcccCCCCCccCCCCCCcEEcCHHHhCChH-----------
Confidence            456899999976     57899999         7899998          999999999998875421           


Q ss_pred             HHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCccc
Q 018869          144 AFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       144 ~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                         +.+...+++++++||+||..|. +|+.+++.|+.+| .+|++|+|||.+|...|+|+++
T Consensus       174 ---e~~~~~~~~~~~~iv~~C~~G~-rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~  230 (230)
T 2eg4_A          174 ---GLLERLGLQPGQEVGVYCHSGA-RSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP  230 (230)
T ss_dssp             ---THHHHHTCCTTCEEEEECSSSH-HHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred             ---HHHHhcCCCCCCCEEEEcCChH-HHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence               1455568899999999998765 8999999999999 8999999999999999999864

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}

Probab=99.73  E-value=4.1e-18  Score=144.35  Aligned_cols=108  Identities=19%  Similarity=0.159  Sum_probs=80.6

Q ss_pred             CCcccHHHHHHhcCCC----CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 018869           75 EPVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~----~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~  150 (349)
                      .+.|++++|+++++++    +++|||||         +. +|..||||||+|+|+..+...         ..+++.+.+.
T Consensus         4 ~~~Is~~el~~~l~~~~~~~~~~lIDvR---------~~-ey~~gHIpGAinip~~~l~~~---------~~~~l~~~l~   64 (152)
T 2j6p_A            4 YTYIKPEELVELLDNPDSLVKAAVIDCR---------DS-DRDCGFIVNSINMPTISCTEE---------MYEKLAKTLF   64 (152)
T ss_dssp             CEEECHHHHHHHHHSHHHHHTEEEEECC---------ST-TGGGCBCTTCEECCTTTCCHH---------HHHHHHHHHH
T ss_pred             cCccCHHHHHHHHhCCCCCCCEEEEEcC---------cH-HhCcCcCCCcEECChhHhhHH---------HHHHHHHHhc
Confidence            4569999999998763    78999999         66 899999999999999865321         0123444444


Q ss_pred             HcCCCCCCcEEEEC-CCCcchHHHHH----HHHHHcCC--CceeEeCCCHHHHHhCCCCccc
Q 018869          151 ALGLENKDGLVVYD-GKGIFSAARVW----WMFRVFGH--DRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       151 ~~gi~~~~~VVvy~-~~g~~~a~r~~----~~L~~~G~--~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      .   .+++.||+|| ..|. ++..++    +.|+.+||  ++|++|+||+.+|.++|.++..
T Consensus        65 ~---~~~~~vV~yC~~sg~-rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~  122 (152)
T 2j6p_A           65 E---EKKELAVFHCAQSLV-RAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRP  122 (152)
T ss_dssp             H---TTCCEEEEECSSSSS-HHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCG
T ss_pred             c---cCCCEEEEEcCCCCC-ccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCC
Confidence            3   2334577788 4554 676666    67888897  5899999999999998887643

>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}

Probab=99.73  E-value=6.9e-18  Score=155.16  Aligned_cols=104  Identities=16%  Similarity=0.270  Sum_probs=87.2

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ..+.|+++++.+++++++++|||||         +..+|..||||||+|+|+..+.+.          ++.+.   ..+.
T Consensus       120 ~~~~Is~~el~~ll~~~~~vlIDVR---------~~~Ey~~GHIpGAiniP~~~~~~~----------~~~l~---~~l~  177 (265)
T 4f67_A          120 AGTYLSPEEWHQFIQDPNVILLDTR---------NDYEYELGTFKNAINPDIENFREF----------PDYVQ---RNLI  177 (265)
T ss_dssp             TTCEECHHHHHHHTTCTTSEEEECS---------CHHHHHHEEETTCBCCCCSSGGGH----------HHHHH---HHTG
T ss_pred             CCceECHHHHHHHhcCCCeEEEEeC---------CchHhhcCcCCCCEeCCHHHHHhh----------HHHHH---Hhhh
Confidence            4678999999999988889999999         789999999999999999876431          11222   2344


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCC
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G  200 (349)
                      .+++++||+||.+|. ++.++++.|+..||+||++|+||+.+|.++.
T Consensus       178 ~~kdk~IVvyC~~G~-RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~  223 (265)
T 4f67_A          178 DKKDKKIAMFCTGGI-RCEKTTAYMKELGFEHVYQLHDGILNYLESI  223 (265)
T ss_dssp             GGTTSCEEEECSSSH-HHHHHHHHHHHHTCSSEEEETTHHHHHHHHS
T ss_pred             hCCCCeEEEEeCCCh-HHHHHHHHHHHcCCCCEEEecCHHHHHHHhc
Confidence            578899999998665 8999999999999999999999999998753

>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}

Probab=99.73  E-value=6e-18  Score=140.57  Aligned_cols=116  Identities=20%  Similarity=0.290  Sum_probs=77.5

Q ss_pred             cccHHHHHH--------hcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCccccccc-CCCCCCCCCCHHHHHH
Q 018869           77 VVSVDWLHA--------NLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR-TTNLPHMLPSEEAFAA  147 (349)
Q Consensus        77 lIs~~~L~~--------~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~-~~~~~~~lp~~~~~~~  147 (349)
                      +|+++||++        ++++++++|||||         +..+|..||||||+|+|+..+... ... ...++    +..
T Consensus         2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR---------~~~e~~~ghIpgA~~ip~~~~~~~~~~~-~~~~~----~~~   67 (142)
T 2ouc_A            2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCR---------PFMEYNKSHIQGAVHINCADKISRRRLQ-QGKIT----VLD   67 (142)
T ss_dssp             EECHHHHHHHHHC----------CEEEECS---------CHHHHHHEEETTCEECCCSSHHHHHHHH-TTSSC----HHH
T ss_pred             ccCHHHHHHHHHhcccccCCCCCCEEEEeC---------CHHHhhhhhccCccccCccHHHHHHHhh-cCCcc----hhh
Confidence            689999999        6666679999999         789999999999999999874321 000 00111    112


Q ss_pred             HHHHcCCC------CCCcEEEECCCCcch--------HHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          148 AVSALGLE------NKDGLVVYDGKGIFS--------AARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       148 ~~~~~gi~------~~~~VVvy~~~g~~~--------a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                      .+...+..      ++++|||||..|...        +..++..|...|| +|++|+||+.+|.++|+++.++.
T Consensus        68 ~~~~~~~~~~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~~  140 (142)
T 2ouc_A           68 LISCREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDNS  140 (142)
T ss_dssp             HHHTTSCTTHHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEEC
T ss_pred             hCCChhhhHHHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhccc
Confidence            22111110      368899999877632        2234555788999 99999999999999999887643

>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A

Probab=99.73  E-value=9.8e-18  Score=149.64  Aligned_cols=106  Identities=14%  Similarity=0.134  Sum_probs=85.6

Q ss_pred             CCCcccHHHHHHhcCCC------CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHH
Q 018869           74 KEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~------~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~  147 (349)
                      ..+.|++++|+++++++      +++|||||         +..+|..||||||+|||+..+.                ..
T Consensus        42 ~~~~Is~~el~~~l~~~~~~~~~~~~lIDvR---------~~~Ey~~gHIpGAinip~~~l~----------------~~   96 (211)
T 1qb0_A           42 DLKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDA----------------ES   96 (211)
T ss_dssp             TSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHH----------------HH
T ss_pred             CCCeeCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHccCcCCCCEECCchHHH----------------HH
Confidence            45789999999999763      68999999         7899999999999999987532                11


Q ss_pred             HHH---HcCCCCCCcE--EEECC-CCcchHHHHHHHHHH----------cCCCceeEeCCCHHHHHhCCCCccc
Q 018869          148 AVS---ALGLENKDGL--VVYDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       148 ~~~---~~gi~~~~~V--Vvy~~-~g~~~a~r~~~~L~~----------~G~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      .+.   .++++++++|  |+||. .|. ++.++++.|+.          +||++|++|+||+.+|.++|.|+..
T Consensus        97 ~~~~~~~l~~~~d~~ivvVvyC~~sG~-rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~  169 (211)
T 1qb0_A           97 FLLKSPIAPCSLDKRVILIFHCEFSSE-RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCE  169 (211)
T ss_dssp             HHHTTTCCCSSTTSEEEEEEECSSSSS-HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred             hhhhhhhccccCCCCeEEEEECCCCCc-cHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccC
Confidence            222   2344577887  78998 555 78999998875          7999999999999999999988754

>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A

Probab=99.72  E-value=1e-17  Score=144.95  Aligned_cols=106  Identities=14%  Similarity=0.160  Sum_probs=81.2

Q ss_pred             CCCcccHHHHHHhcCC------CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHH
Q 018869           74 KEPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~------~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~  147 (349)
                      ..+.|++++|++++++      ++++|||||         +..+|..||||||+|+|+..+..                .
T Consensus        22 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR---------~~~ey~~ghIpgAinip~~~l~~----------------~   76 (175)
T 2a2k_A           22 DLKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAE----------------S   76 (175)
T ss_dssp             TSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHH----------------H
T ss_pred             CCceeCHHHHHHHHhcccccCCCCEEEEECC---------CHHHHcCCcCCCcEECChhHHHH----------------H
Confidence            4567999999999976      368999999         78999999999999999875421                1


Q ss_pred             HHHH---cCCCCCCcEEE--ECC-CCcchHHHHHHHHHH----------cCCCceeEeCCCHHHHHhCCCCccc
Q 018869          148 AVSA---LGLENKDGLVV--YDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       148 ~~~~---~gi~~~~~VVv--y~~-~g~~~a~r~~~~L~~----------~G~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      .+..   ++++++++|||  ||. .|. ++.++++.|+.          +||++|++|+||+.+|.++|.|+-.
T Consensus        77 ~~~~~~~~~~~~~~~ivvv~yC~~~g~-rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~  149 (175)
T 2a2k_A           77 FLLKSPIAPCSLDKRVILIFHSEFSSE-RGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCE  149 (175)
T ss_dssp             HHHSSCCCC----CEEEEEEECSSSSS-HHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred             hhhhhhhccccCCCCeEEEEECCCCCC-ccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccC
Confidence            1221   23346788754  687 554 78999998885          5999999999999999999888744

>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}

Probab=99.71  E-value=9.7e-18  Score=139.62  Aligned_cols=92  Identities=20%  Similarity=0.262  Sum_probs=81.6

Q ss_pred             cccCHHHHHHHhhc--CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 018869          244 LIWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (349)
Q Consensus       244 ~~i~~~~v~~~~~~--~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~  321 (349)
                      ..++.+++.+.++.  ++.+|||+|++.||           ..||||||+|+|+.++.  +...+++++|++.+...+++
T Consensus        23 ~~is~~el~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgAinip~~~l~--~~~~~~~~~~~~~~~~~~~~   89 (139)
T 3d1p_A           23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEY-----------SIVHIPASINVPYRSHP--DAFALDPLEFEKQIGIPKPD   89 (139)
T ss_dssp             EECCHHHHHHHHHHTCTTEEEEECSCHHHH-----------HHCCCTTCEECCTTTCT--TGGGSCHHHHHHHHSSCCCC
T ss_pred             ceecHHHHHHHHhCCCCCeEEEECcCHHHH-----------hCCCCCCcEEcCHHHhh--hhccCCHHHHHHHHhccCCC
Confidence            36899999998863  57899999999999           67999999999999874  33457889999999877889


Q ss_pred             CCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          322 LEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       322 ~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++++||+||++|.||..++..|+.+||
T Consensus        90 ~~~~ivvyC~~G~rs~~aa~~L~~~G~  116 (139)
T 3d1p_A           90 SAKELIFYCASGKRGGEAQKVASSHGY  116 (139)
T ss_dssp             TTSEEEEECSSSHHHHHHHHHHHTTTC
T ss_pred             CCCeEEEECCCCchHHHHHHHHHHcCC
Confidence            999999999999999999999999998

>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1

Probab=99.70  E-value=1.4e-17  Score=142.19  Aligned_cols=107  Identities=15%  Similarity=0.174  Sum_probs=83.6

Q ss_pred             CCCcccHHHHHHhcCC------CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHH
Q 018869           74 KEPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~------~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~  147 (349)
                      ..+.|++++|++++++      ++++|||||         +..+|..||||||+|+|+..+...                
T Consensus        21 ~~~~is~~el~~~l~~~~~~~~~~~~liDvR---------~~~e~~~ghIpgAinip~~~~~~~----------------   75 (161)
T 1c25_A           21 DLKYISPEIMASVLNGKFANLIKEFVIIDCR---------YPYEYEGGHIKGAVNLHMEEEVED----------------   75 (161)
T ss_dssp             TSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHHH----------------
T ss_pred             CcceeCHHHHHHHHhccccccCCCeEEEECC---------ChHHccCCcccCcEeCChhHHHHH----------------
Confidence            3567999999999976      368999999         789999999999999999754221                


Q ss_pred             HHHHc--CCCCCCcE--EEECC-CCcchHHHHHHHHHH----------cCCCceeEeCCCHHHHHhCCCCcccC
Q 018869          148 AVSAL--GLENKDGL--VVYDG-KGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYDVESS  206 (349)
Q Consensus       148 ~~~~~--gi~~~~~V--Vvy~~-~g~~~a~r~~~~L~~----------~G~~~V~~L~GG~~~W~~~G~pv~~~  206 (349)
                      .+...  -.+++++|  |+||. .|. ++..++..|+.          +||++|++|+||+.+|.+++.|+...
T Consensus        76 ~~~~~~~~~~~~~~ivvv~yC~~sg~-rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~  148 (161)
T 1c25_A           76 FLLKKPIVPTDGKRVIVVFHCEFSSE-RGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEP  148 (161)
T ss_dssp             HTTTSCCCCCTTSEEEEEEECSSSSS-HHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEES
T ss_pred             HHhhhhhccCCCCCeEEEEEcCCCCc-chHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCC
Confidence            11111  12466775  57887 554 78888888875          49999999999999999998887664

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=99.70  E-value=1.7e-17  Score=165.16  Aligned_cols=102  Identities=25%  Similarity=0.392  Sum_probs=89.8

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      .+.|+++++++++++++.+|||+|         +..+|..||||||+|+|+..+...                 +.  ++
T Consensus       373 ~~~i~~~~l~~~~~~~~~~lvDvR---------~~~e~~~ghIpgA~~ip~~~l~~~-----------------~~--~l  424 (474)
T 3tp9_A          373 YANVSPDEVRGALAQQGLWLLDVR---------NVDEWAGGHLPQAHHIPLSKLAAH-----------------IH--DV  424 (474)
T ss_dssp             CEEECHHHHHHTTTTTCCEEEECS---------CHHHHHHCBCTTCEECCHHHHTTT-----------------GG--GS
T ss_pred             ccccCHHHHHHHhcCCCcEEEECC---------CHHHHhcCcCCCCEECCHHHHHHH-----------------Hh--cC
Confidence            457999999999987789999999         889999999999999999866432                 11  35


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCccc
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      +++++||+||..|. +|+.+++.|+.+||++|++|+|||.+|.++|+|+++
T Consensus       425 ~~~~~vvv~C~~G~-ra~~a~~~L~~~G~~~v~~~~Gg~~~W~~~g~p~~~  474 (474)
T 3tp9_A          425 PRDGSVCVYCRTGG-RSAIAASLLRAHGVGDVRNMVGGYEAWRGKGFPVEA  474 (474)
T ss_dssp             CSSSCEEEECSSSH-HHHHHHHHHHHHTCSSEEEETTHHHHHHHTTCCCBC
T ss_pred             CCCCEEEEECCCCH-HHHHHHHHHHHcCCCCEEEecChHHHHHhCCCCCCC
Confidence            78899999998776 899999999999999999999999999999999874

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4

Probab=99.70  E-value=2.9e-17  Score=139.79  Aligned_cols=120  Identities=18%  Similarity=0.256  Sum_probs=84.9

Q ss_pred             CCCcccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCC--CCCCCCCCHHHHHHHH
Q 018869           74 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--NLPHMLPSEEAFAAAV  149 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~--~~~~~lp~~~~~~~~~  149 (349)
                      ....|++++|.+++++.  +++|||||         ++.+|+.||||||+|||+..+.....  .+...+|..+  .+.+
T Consensus        13 ~~~~i~~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHI~gainip~~~~~~~~~~~~l~~~lp~~~--~~~~   81 (157)
T 1whb_A           13 EKGAITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPDDS--KDTW   81 (157)
T ss_dssp             CCSEECHHHHHHHHTCSSSCEEEEEES---------CHHHHHHCCBTTCEEECSSSCCTTCCHHHHHHSCCTTH--HHHH
T ss_pred             cCCccCHHHHHHHHhcCCCCeEEEECC---------CHHHHHhccccCCcccCHHHccCCCcHHHHHHHCChHH--HHHH
Confidence            45689999999999876  79999999         78999999999999999976532110  0112344322  3444


Q ss_pred             HHcCCCCCCcEEEECCCCcc---hHHHHHHHHHH----c----CCC-ceeEeCCCHHHHHhCCCCcccCC
Q 018869          150 SALGLENKDGLVVYDGKGIF---SAARVWWMFRV----F----GHD-RVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       150 ~~~gi~~~~~VVvy~~~g~~---~a~r~~~~L~~----~----G~~-~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                      ...+  +.+.|||||..+..   .+++++|.|..    +    |+. +|++|+||+.+|.+. +|+....
T Consensus        82 ~~~~--~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~  148 (157)
T 1whb_A           82 KKRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTN  148 (157)
T ss_dssp             HGGG--TSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSC
T ss_pred             HhcC--CCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCC
Confidence            4443  34568889876642   35677777762    2    444 499999999999984 8877654

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*

Probab=99.69  E-value=5e-18  Score=146.38  Aligned_cols=114  Identities=18%  Similarity=0.239  Sum_probs=82.0

Q ss_pred             CCcccHHHHHHhcCCC-------CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHH
Q 018869           75 EPVVSVDWLHANLREP-------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~-------~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~  147 (349)
                      .+.|++++|.+++++.       +++|||||         + .+|..||||||+|||+..+...       .+..+++.+
T Consensus        30 ~~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR---------~-~Ey~~GHIpGAiniP~~~l~~~-------~~~l~~l~~   92 (169)
T 3f4a_A           30 VKYLDPTELHRWMQEGHTTTLREPFQVVDVR---------G-SDYMGGHIKDGWHYAYSRLKQD-------PEYLRELKH   92 (169)
T ss_dssp             EEEECHHHHHHHHHHTSCTTTCCCEEEEECC---------S-TTCTTCEETTCEECCHHHHHHC-------HHHHHHHHH
T ss_pred             CcEeCHHHHHHHHhcCCccCcCCCEEEEECC---------c-hHHccCcCCCCEECCHHHhhcc-------cccHHHHHH
Confidence            4579999999998643       48999999         6 7899999999999999876432       001223333


Q ss_pred             HHHHcCCC--CCCcEEEECCCCcchHHHHHHHH-HHc---C--CCceeEeCCCHHHHHhCCCCccc
Q 018869          148 AVSALGLE--NKDGLVVYDGKGIFSAARVWWMF-RVF---G--HDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       148 ~~~~~gi~--~~~~VVvy~~~g~~~a~r~~~~L-~~~---G--~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      .+...+++  ++++|||||..|+.++.+++..| +.+   |  +.+|++|+||+.+|.+++.+.+.
T Consensus        93 ~~~~~~~~~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~  158 (169)
T 3f4a_A           93 RLLEKQADGRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDES  158 (169)
T ss_dssp             HHHHHHHTSSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTT
T ss_pred             HHHhhcccccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCccc
Confidence            33332222  24789999988755777776444 332   5  57899999999999998877654

>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}

Probab=99.68  E-value=6.7e-17  Score=144.48  Aligned_cols=101  Identities=19%  Similarity=0.142  Sum_probs=78.4

Q ss_pred             CCCcccHHHHHHhcCCC------CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHH
Q 018869           74 KEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~------~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~  147 (349)
                      ..+.|++++|.++++++      +++|||||         .+.||..||||||+|||+..                .+.+
T Consensus        55 ~~~~Is~~eL~~~l~~~~~~~~~~~~lIDVR---------~~~Ey~~GHIpGAinIP~~~----------------~l~~  109 (216)
T 3op3_A           55 DLKYVNPETVAALLSGKFQGLIEKFYVIDCR---------YPYEYLGGHIQGALNLYSQE----------------ELFN  109 (216)
T ss_dssp             SSEEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTSEETTCEECCSHH----------------HHHH
T ss_pred             CCCEeCHHHHHHHHhCCCccccCCEEEEEeC---------cHHHHhcCCccCCEECChHH----------------HHHH
Confidence            35679999999999875      68999999         78999999999999999863                2333


Q ss_pred             HHHHcC---CCCCC--cEEEECC-CCcchHHHHHHHHHHc----------CCCceeEeCCCHHHHHhCC
Q 018869          148 AVSALG---LENKD--GLVVYDG-KGIFSAARVWWMFRVF----------GHDRVWVLDGGLPRWRASG  200 (349)
Q Consensus       148 ~~~~~g---i~~~~--~VVvy~~-~g~~~a~r~~~~L~~~----------G~~~V~~L~GG~~~W~~~G  200 (349)
                      .+...+   .++++  .|||||. +|. ++..++..|+..          ||++|++|+||+.+|.++.
T Consensus       110 ~l~~~~~~~~~~~k~~~VVvyC~~SG~-Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~  177 (216)
T 3op3_A          110 FFLKKPIVPLDTQKRIIIVFHCEFSSE-RGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEY  177 (216)
T ss_dssp             HHTSSCCCCSSTTSEEEEEEECCC--C-CHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTC
T ss_pred             HHhhccccccccCCCCEEEEEeCCCCh-HHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhC
Confidence            332222   12333  4999998 554 899999889876          8999999999999998764

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}

Probab=99.67  E-value=1.4e-16  Score=135.64  Aligned_cols=112  Identities=19%  Similarity=0.325  Sum_probs=78.0

Q ss_pred             CCCcccHHHHHHhcC--------CCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccc----cCCCCC--CCC
Q 018869           74 KEPVVSVDWLHANLR--------EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD----RTTNLP--HML  139 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~--------~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~----~~~~~~--~~l  139 (349)
                      ....|++++|.++++        +++++|||||         +..+|..||||||+|+|+..+..    .....+  ..+
T Consensus         9 ~~~~is~~el~~~l~~~~~~~~~~~~~~liDvR---------~~~e~~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~   79 (158)
T 3tg1_B            9 SIKIIYPNDLAKKMTKCSKSHLPSQGPVIIDCR---------PFMEYNKSHIQGAVHINCADKISRRRLQQGKITVLDLI   79 (158)
T ss_dssp             --CEECHHHHHHHHCC----------CEEEECS---------CHHHHHHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHT
T ss_pred             CCcEecHHHHHHHHHhcccccCCCCCEEEEEcC---------CHHHHHhCCCCCceeechhHHHHHhhhhcCcccHHhhc
Confidence            456899999999997        4468999999         78899999999999999987531    000000  001


Q ss_pred             CCHHHHHHHHHHcCCCCCCcEEEECCCCc--------chHHHHHHHHHHcCCCceeEeCCCHHHHHhC
Q 018869          140 PSEEAFAAAVSALGLENKDGLVVYDGKGI--------FSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (349)
Q Consensus       140 p~~~~~~~~~~~~gi~~~~~VVvy~~~g~--------~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~  199 (349)
                      +..+. .+   .+...++++|||||..|.        .++..+++.|+..|| +|++|+|||.+|.+.
T Consensus        80 ~~~~~-~~---~~~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~  142 (158)
T 3tg1_B           80 SCREG-KD---SFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN  142 (158)
T ss_dssp             CCCCS-SC---SSTTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred             CCHHH-HH---HHhccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence            10000 00   011124789999998774        258889999999999 699999999999754

>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A

Probab=99.66  E-value=5.6e-17  Score=128.37  Aligned_cols=78  Identities=22%  Similarity=0.316  Sum_probs=67.4

Q ss_pred             ccCHHHHHHHhhc-CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          245 IWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       245 ~i~~~~v~~~~~~-~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      .||.+|+++.+.+ ++.+|||+|++.||           ..||||||+|+|++++.+.             +.  .++++
T Consensus         3 ~Is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~-------------~~--~l~~~   56 (103)
T 3iwh_A            3 SITTDELKNKLLESKPVQIVDVRTDEET-----------AMGYIPNAKLIPMDTIPDN-------------LN--SFNKN   56 (103)
T ss_dssp             EECHHHHHHGGGSSSCCEEEECSCHHHH-----------TTCBCTTCEECCGGGGGGC-------------GG--GCCTT
T ss_pred             CcCHHHHHHHHhCCCCeEEEECCChhHH-----------hcCccCCcccCcccchhhh-------------hh--hhcCC
Confidence            3788999987754 46889999999999           7899999999999877532             22  27899


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++||+||++|.||..++..|+..||
T Consensus        57 ~~ivv~C~~G~rS~~aa~~L~~~G~   81 (103)
T 3iwh_A           57 EIYYIVCAGGVRSAKVVEYLEANGI   81 (103)
T ss_dssp             SEEEEECSSSSHHHHHHHHHHTTTC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999999999998

>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}

Probab=99.66  E-value=7.2e-17  Score=126.75  Aligned_cols=78  Identities=19%  Similarity=0.280  Sum_probs=67.7

Q ss_pred             ccCHHHHHHHhh-cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          245 IWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       245 ~i~~~~v~~~~~-~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      .++.+++.+.+. +++.+|||+|++.||           ..||||||+|+|+.++.+.             +.  .++++
T Consensus         3 ~is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~l~~~-------------~~--~l~~~   56 (100)
T 3foj_A            3 SITVTELKEKILDANPVNIVDVRTDQET-----------AMGIIPGAETIPMNSIPDN-------------LN--YFNDN   56 (100)
T ss_dssp             EECHHHHHHGGGSSSCCEEEECSCHHHH-----------TTCBCTTCEECCGGGGGGC-------------GG--GSCTT
T ss_pred             ccCHHHHHHHHhcCCCcEEEECCCHHHH-----------hcCcCCCCEECCHHHHHHH-------------HH--hCCCC
Confidence            478899999884 567999999999999           6799999999999877532             22  37889


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++||+||++|.||..++..|+..||
T Consensus        57 ~~ivvyC~~g~rs~~a~~~L~~~G~   81 (100)
T 3foj_A           57 ETYYIICKAGGRSAQVVQYLEQNGV   81 (100)
T ss_dssp             SEEEEECSSSHHHHHHHHHHHTTTC
T ss_pred             CcEEEEcCCCchHHHHHHHHHHCCC
Confidence            9999999999999999999999998

>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}

Probab=99.66  E-value=1.3e-16  Score=151.22  Aligned_cols=112  Identities=20%  Similarity=0.350  Sum_probs=87.7

Q ss_pred             CcccHHHHHHhcCCC----CcEEEEeccCCCCCCCCChhhhh-----------cCCCCCceecCcccccccCCCCCCCCC
Q 018869           76 PVVSVDWLHANLREP----DLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHMLP  140 (349)
Q Consensus        76 ~lIs~~~L~~~l~~~----~~~iIDvR~~~~~~~~~~~~~y~-----------~GHIPGAi~ip~~~l~~~~~~~~~~lp  140 (349)
                      .+++.+++.+.+++.    +.+|||+|         +.++|.           .||||||+|+|+..+.+....   .++
T Consensus       184 ~v~~~~~v~~~v~~~~~~~~~~lvDaR---------s~~rf~G~~~ep~~~~r~GHIPGA~nlP~~~~ld~~~~---~~~  251 (327)
T 3utn_X          184 EIVDYEEMFQLVKSGELAKKFNAFDAR---------SLGRFEGTEPEPRSDIPSGHIPGTQPLPYGSLLDPETK---TYP  251 (327)
T ss_dssp             HEECHHHHHHHHHTTCHHHHCEEEECS---------CHHHHHTSSCCSSSSCCCCBCTTEEECCGGGGSCTTTC---CCC
T ss_pred             heecHHHHhhhhhcccccccceeeccC---------ccceecccccCccccccCCCCCCCcccChhhccCCCCC---CCC
Confidence            478999998888653    47899999         666664           699999999999987654322   233


Q ss_pred             -CHHH----HHHHHHH--cCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCC
Q 018869          141 -SEEA----FAAAVSA--LGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (349)
Q Consensus       141 -~~~~----~~~~~~~--~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G  200 (349)
                       ..++    |++.+..  .|++++++||+||+.|. +|+.++..|+.+|+++|++|||+|.+|....
T Consensus       252 ~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGv-tA~~~~laL~~lG~~~v~lYdGSWsEW~~r~  317 (327)
T 3utn_X          252 EAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGV-SGVIIKTALELAGVPNVRLYDGSWTEWVLKS  317 (327)
T ss_dssp             CTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSH-HHHHHHHHHHHTTCCSEEEESSHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHH-HHHHHHHHHHHcCCCCceeCCCcHHHhcccc
Confidence             3343    4444443  38999999999998776 8999999999999999999999999997643

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4

Probab=99.65  E-value=4.9e-17  Score=138.46  Aligned_cols=119  Identities=18%  Similarity=0.231  Sum_probs=82.5

Q ss_pred             CCCcccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCC--CCCCCCCCHHHHHHHH
Q 018869           74 KEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTT--NLPHMLPSEEAFAAAV  149 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~--~~~~~lp~~~~~~~~~  149 (349)
                      ....|++++|.++++++  +++|||||         ++.+|..||||||+|||+..+.....  .+...+|.  ...+.+
T Consensus        18 ~~~~is~~~l~~~l~~~~~~~~liDvR---------~~~ey~~gHI~gAinip~~~l~~~~~~~~l~~~lp~--~~~~l~   86 (157)
T 2gwf_A           18 GSGAITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLPD--DSKDTW   86 (157)
T ss_dssp             -CCEECHHHHHHHHHSTTSCEEEEECS---------CHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSCH--HHHHHH
T ss_pred             CCCccCHHHHHHHHhcCCCCeEEEECC---------CHHHHHhcCccCCcccCHHHcCCCCcHHHHHHHcCH--HHHHHH
Confidence            45679999999998765  79999999         78999999999999999986642210  01123442  223445


Q ss_pred             HHcCCCCCCcEEEECCCCcc---hHHHHHHHHH----Hc----CCC-ceeEeCCCHHHHHhCCCCcccC
Q 018869          150 SALGLENKDGLVVYDGKGIF---SAARVWWMFR----VF----GHD-RVWVLDGGLPRWRASGYDVESS  206 (349)
Q Consensus       150 ~~~gi~~~~~VVvy~~~g~~---~a~r~~~~L~----~~----G~~-~V~~L~GG~~~W~~~G~pv~~~  206 (349)
                      ...+  +.+.|||||..+..   .++++++.|.    .+    |+. +|++|+||+.+|.+ .+|....
T Consensus        87 ~~~~--~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~-~~p~~~~  152 (157)
T 2gwf_A           87 KKRG--NVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLL-CYPQYTT  152 (157)
T ss_dssp             HTTT--TSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHH-HCGGGBS
T ss_pred             HhcC--CCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHH-HChhhcC
Confidence            5443  44568888876642   3456667765    22    343 49999999999997 4876654

>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3

Probab=99.65  E-value=9.3e-17  Score=155.16  Aligned_cols=104  Identities=18%  Similarity=0.234  Sum_probs=85.8

Q ss_pred             CCCcEEEEeccCCCCCCCCChhhhh-----------cCCCCCceecCccccc--ccCCCCCCC-CCCHHHHHHHHHHc--
Q 018869           89 EPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVA--DRTTNLPHM-LPSEEAFAAAVSAL--  152 (349)
Q Consensus        89 ~~~~~iIDvR~~~~~~~~~~~~~y~-----------~GHIPGAi~ip~~~l~--~~~~~~~~~-lp~~~~~~~~~~~~--  152 (349)
                      +++.+|||||         +..+|.           .||||||+|+|+..+.  +..    .. +.+.+++++.+..+  
T Consensus       172 ~~~~~lIDvR---------~~~Ef~G~~~~~~~~~~~GhIpGAiniP~~~l~~~~~~----~~~~~~~~~l~~~~~~~~~  238 (373)
T 1okg_A          172 PPQAIITDAR---------SADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGD----GKVLRSEEEIRHNIMTVVQ  238 (373)
T ss_dssp             CTTCCEEECS---------CHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSS----SCEECCHHHHHHHHHTTCC
T ss_pred             ccCceEEeCC---------CHHHccccccccccCCcCccCCCcEEecHHHhhccCCC----CCccCCHHHHHHHHHhhhc
Confidence            4468899999         889999           9999999999999875  321    12 55778999999888  


Q ss_pred             CCCC---CCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh-CCCCcccC
Q 018869          153 GLEN---KDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESS  206 (349)
Q Consensus       153 gi~~---~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~-~G~pv~~~  206 (349)
                      |+++   +++||+||..|. +|+.+++.|+.+||+||++|+|||.+|.. .++|++++
T Consensus       239 gi~~~~~d~~ivvyC~sG~-rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~  295 (373)
T 1okg_A          239 GAGDAADLSSFVFSCGSGV-TACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS  295 (373)
T ss_dssp             -----CCCTTSEEECSSSS-THHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred             CCCcccCCCCEEEECCchH-HHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence            8888   999999998776 89999999999999999999999999987 68887764

>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3

Probab=99.62  E-value=1e-16  Score=131.94  Aligned_cols=90  Identities=16%  Similarity=0.190  Sum_probs=75.5

Q ss_pred             cccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       244 ~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      ..++.+++.+.++ ++.+|||+|++.||           ..||||||+|+|+..+.. .+.+.+.+.+++.+.  .++++
T Consensus        18 ~~is~~e~~~~l~-~~~~lIDvR~~~e~-----------~~ghIpgAinip~~~~~~-~~~~~~~~~~~~~~~--~l~~~   82 (129)
T 1tq1_A           18 SSVSVTVAHDLLL-AGHRYLDVRTPEEF-----------SQGHACGAINVPYMNRGA-SGMSKNTDFLEQVSS--HFGQS   82 (129)
T ss_dssp             EEEEHHHHHHHHH-HTCCEEEESCHHHH-----------HHCCBTTBEECCSCCCST-TTCCCTTTHHHHHTT--TCCTT
T ss_pred             cccCHHHHHHHhc-CCCEEEECCCHHHH-----------hcCCCCCcEECcHhhccc-ccccCCHHHHHHHHh--hCCCC
Confidence            3588899998886 46889999999999           679999999999977643 355556666666655  47889


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++||+||++|.||..++..|+.+||
T Consensus        83 ~~ivvyC~~G~rs~~aa~~L~~~G~  107 (129)
T 1tq1_A           83 DNIIVGCQSGGRSIKATTDLLHAGF  107 (129)
T ss_dssp             SSEEEEESSCSHHHHHHHHHHHHHC
T ss_pred             CeEEEECCCCcHHHHHHHHHHHcCC
Confidence            9999999999999999999999998

>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A

Probab=99.62  E-value=3.2e-16  Score=124.75  Aligned_cols=78  Identities=19%  Similarity=0.253  Sum_probs=68.9

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .++.+++.+.+++++.+|||+|++.||           ..||||||+|+|+.+             |.+.+.+  +++++
T Consensus         6 ~i~~~~l~~~~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~-------------l~~~~~~--l~~~~   59 (108)
T 1gmx_A            6 CINVADAHQKLQEKEAVLVDIRDPQSF-----------AMGHAVQAFHLTNDT-------------LGAFMRD--NDFDT   59 (108)
T ss_dssp             EECHHHHHHHHHTTCCEEEECSCHHHH-----------HHCEETTCEECCHHH-------------HHHHHHH--SCTTS
T ss_pred             ccCHHHHHHHHhCCCCEEEEcCCHHHH-----------HhCCCccCEeCCHHH-------------HHHHHHh--cCCCC
Confidence            478899999888777999999999999           789999999999854             3445554  78999


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcC
Q 018869          325 PVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +||+||.+|.||..++..|+..||
T Consensus        60 ~ivvyc~~g~rs~~a~~~L~~~G~   83 (108)
T 1gmx_A           60 PVMVMCYHGNSSKGAAQYLLQQGY   83 (108)
T ss_dssp             CEEEECSSSSHHHHHHHHHHHHTC
T ss_pred             CEEEEcCCCchHHHHHHHHHHcCC
Confidence            999999999999999999999998

>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}

Probab=99.61  E-value=5.2e-16  Score=123.69  Aligned_cols=76  Identities=17%  Similarity=0.323  Sum_probs=66.5

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .++.+++.+.+++  .+|||+|++.||           ..||||||+|+|+.++             .+.+.+  +++++
T Consensus         5 ~is~~el~~~l~~--~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~l-------------~~~~~~--l~~~~   56 (108)
T 3gk5_A            5 SINAADLYENIKA--YTVLDVREPFEL-----------IFGSIANSINIPISEL-------------REKWKI--LERDK   56 (108)
T ss_dssp             EECHHHHHHTTTT--CEEEECSCHHHH-----------TTCBCTTCEECCHHHH-------------HHHGGG--SCTTS
T ss_pred             EeCHHHHHHHHcC--CEEEECCCHHHH-----------hcCcCCCCEEcCHHHH-------------HHHHHh--CCCCC
Confidence            4788999998875  899999999999           6799999999998544             444443  78899


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcC
Q 018869          325 PVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +||+||++|.||..++..|+.+||
T Consensus        57 ~ivvyC~~G~rs~~aa~~L~~~G~   80 (108)
T 3gk5_A           57 KYAVICAHGNRSAAAVEFLSQLGL   80 (108)
T ss_dssp             CEEEECSSSHHHHHHHHHHHTTTC
T ss_pred             eEEEEcCCCcHHHHHHHHHHHcCC
Confidence            999999999999999999999998

>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}

Probab=99.61  E-value=4.7e-16  Score=120.66  Aligned_cols=75  Identities=20%  Similarity=0.306  Sum_probs=62.2

Q ss_pred             cCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 018869          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (349)
Q Consensus       246 i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~  325 (349)
                      ++.+++.+.+++ +.+|||+|++.||           ..||||||+|+|+.++.+.             +.  .+++ ++
T Consensus         4 is~~~l~~~~~~-~~~liDvR~~~e~-----------~~ghi~gAi~ip~~~l~~~-------------~~--~l~~-~~   55 (94)
T 1wv9_A            4 VRPEELPALLEE-GVLVVDVRPADRR-----------STPLPFAAEWVPLEKIQKG-------------EH--GLPR-RP   55 (94)
T ss_dssp             ECGGGHHHHHHT-TCEEEECCCC--C-----------CSCCSSCCEECCHHHHTTT-------------CC--CCCS-SC
T ss_pred             CCHHHHHHHHHC-CCEEEECCCHHHH-----------hcccCCCCEECCHHHHHHH-------------HH--hCCC-CC
Confidence            567778887765 6899999999999           6799999999999877532             11  3678 99


Q ss_pred             EEEEcCChHHHHHHHHHHHhCcC
Q 018869          326 VVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       326 vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ||+||++|.||..++..|+..||
T Consensus        56 ivvyC~~g~rs~~a~~~L~~~G~   78 (94)
T 1wv9_A           56 LLLVCEKGLLSQVAALYLEAEGY   78 (94)
T ss_dssp             EEEECSSSHHHHHHHHHHHHHTC
T ss_pred             EEEEcCCCChHHHHHHHHHHcCC
Confidence            99999999999999999999998

>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}

Probab=99.58  E-value=7.6e-16  Score=129.62  Aligned_cols=90  Identities=23%  Similarity=0.188  Sum_probs=68.5

Q ss_pred             ccCHHHHHHHhhc-CCceEEeccCCCcccccCCCCCCCCCc-ccc------CCCcccCcccccCCCCCCC--CHHHHHHH
Q 018869          245 IWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRS-GHV------PGSKCIPFPQMLDASQTLL--PADELKKR  314 (349)
Q Consensus       245 ~i~~~~v~~~~~~-~~~~lID~R~~~ey~G~~~~~~~~~~~-GHI------PGA~~ip~~~l~~~~~~l~--~~~el~~~  314 (349)
                      .++.+++.+.+++ ++.+|||+|++.||           .. |||      |||+|+|+.+ .+  ..+.  ..++|.+.
T Consensus         6 ~is~~el~~~l~~~~~~~liDVR~~~e~-----------~~~ghi~~~g~~pgAv~ip~~~-~~--~~~~~~~~~~l~~~   71 (148)
T 2fsx_A            6 DITPLQAWEMLSDNPRAVLVDVRCEAEW-----------RFVGVPDLSSLGREVVYVEWAT-SD--GTHNDNFLAELRDR   71 (148)
T ss_dssp             EECHHHHHHHHHHCTTCEEEECSCHHHH-----------HHTCEECCGGGTCCCEECCSBC-TT--SCBCTTHHHHHHHH
T ss_pred             cCCHHHHHHHHhcCCCeEEEECCCHHHH-----------HhcCCCccccCCCCcEEeeeec-cc--cccCHHHHHHHHHH
Confidence            4788999998874 67899999999999           43 888      9999999987 32  1111  14567766


Q ss_pred             HHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          315 FEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       315 ~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +.+.+++++++||+||++|.||+.++..|+.+||
T Consensus        72 l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~  105 (148)
T 2fsx_A           72 IPADADQHERPVIFLCRSGNRSIGAAEVATEAGI  105 (148)
T ss_dssp             CC-------CCEEEECSSSSTHHHHHHHHHHTTC
T ss_pred             HhhccCCCCCEEEEEcCCChhHHHHHHHHHHcCC
Confidence            6666789999999999999999999999999998

>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A

Probab=99.58  E-value=1.4e-15  Score=115.61  Aligned_cols=67  Identities=19%  Similarity=0.319  Sum_probs=58.5

Q ss_pred             CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHHHH
Q 018869          259 TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACI  338 (349)
Q Consensus       259 ~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA~~  338 (349)
                      +.+|||+|++.||           ..||||||+|+|+.+             |.+.+.+.+++++++||+||++|.||..
T Consensus         1 ~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~-------------l~~~~~~l~~~~~~~ivv~C~~g~rs~~   56 (85)
T 2jtq_A            1 AEHWIDVRVPEQY-----------QQEHVQGAINIPLKE-------------VKERIATAVPDKNDTVKVYCNAGRQSGQ   56 (85)
T ss_dssp             CEEEEECSCHHHH-----------TTEEETTCEECCHHH-------------HHHHHHHHCCCTTSEEEEEESSSHHHHH
T ss_pred             CCEEEECCCHHHH-----------HhCCCCCCEEcCHHH-------------HHHHHHHhCCCCCCcEEEEcCCCchHHH
Confidence            3579999999999           679999999999854             4455666677899999999999999999


Q ss_pred             HHHHHHhCcCC
Q 018869          339 LALVLFPVFFL  349 (349)
Q Consensus       339 ~~~~L~~~g~~  349 (349)
                      ++..|+.+||.
T Consensus        57 aa~~L~~~G~~   67 (85)
T 2jtq_A           57 AKEILSEMGYT   67 (85)
T ss_dssp             HHHHHHHTTCS
T ss_pred             HHHHHHHcCCC
Confidence            99999999983

>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}

Probab=99.56  E-value=4.3e-16  Score=127.06  Aligned_cols=89  Identities=17%  Similarity=0.214  Sum_probs=66.6

Q ss_pred             ccCHHHHHHHhhcC-CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH----HcC
Q 018869          245 IWTLEQVKRNIEEG-TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE----QEG  319 (349)
Q Consensus       245 ~i~~~~v~~~~~~~-~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~----~~~  319 (349)
                      .|+.+++.+.++++ +.+|||+|++.||           ..||||||+|+|+.++.+....+  .+.+.+.+.    +.+
T Consensus         2 ~is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~--~~~~~~~l~~~~~~~~   68 (127)
T 3i2v_A            2 RVSVTDYKRLLDSGAFHLLLDVRPQVEV-----------DICRLPHALHIPLKHLERRDAES--LKLLKEAIWEEKQGTQ   68 (127)
T ss_dssp             EECHHHHHHHHHHTCCCEEEECSCHHHH-----------HHCCCTTSEECCHHHHHTTCHHH--HHHHHHHHHHHHTTC-
T ss_pred             CCCHHHHHHHHhCCCCeEEEECCCHHHh-----------hheecCCceeCChHHHhhhhhhh--HHHHHHHHhhhccccc
Confidence            37889999988765 5899999999999           77999999999998876532111  112222222    235


Q ss_pred             CCCCCCEEEEcCChHHHHHHHHHHHhC
Q 018869          320 ISLEKPVVTACGTGVTACILALVLFPV  346 (349)
Q Consensus       320 i~~~~~vivyC~~G~rA~~~~~~L~~~  346 (349)
                      ++++++||+||++|.||+.++..|..+
T Consensus        69 ~~~~~~ivv~C~~G~rs~~a~~~L~~~   95 (127)
T 3i2v_A           69 EGAAVPIYVICKLGNDSQKAVKILQSL   95 (127)
T ss_dssp             --CCEEEEEECSSSSHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEcCCCCcHHHHHHHHHHh
Confidence            667789999999999999999999988

>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A

Probab=99.56  E-value=2.3e-15  Score=119.46  Aligned_cols=74  Identities=16%  Similarity=0.365  Sum_probs=56.3

Q ss_pred             HHHHHhh--cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEE
Q 018869          250 QVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVV  327 (349)
Q Consensus       250 ~v~~~~~--~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vi  327 (349)
                      ++++.++  +++++|||+|++.||           ..||||||+|+|+.++.+            ..+.  .++++++||
T Consensus         2 el~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgAi~ip~~~l~~------------~~~~--~l~~~~~iv   56 (106)
T 3hix_A            2 VLKSRLEWGEPAFTILDVRDRSTY-----------NDGHIMGAMAMPIEDLVD------------RASS--SLEKSRDIY   56 (106)
T ss_dssp             -----------CCEEEECSCHHHH-----------HTCEETTCEECCGGGHHH------------HHHH--HSCTTSCEE
T ss_pred             hHHHHHHcCCCCeEEEECCCHHHH-----------hcCcCCCCEeCCHHHHHH------------HHHh--cCCCCCeEE
Confidence            4555555  346899999999999           789999999999976532            1122  378899999


Q ss_pred             EEcCChHHHHHHHHHHHhCcC
Q 018869          328 TACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       328 vyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +||.+|.||..++..|+.+||
T Consensus        57 vyc~~g~rs~~a~~~L~~~G~   77 (106)
T 3hix_A           57 VYGAGDEQTSQAVNLLRSAGF   77 (106)
T ss_dssp             EECSSHHHHHHHHHHHHHTTC
T ss_pred             EEECCCChHHHHHHHHHHcCC
Confidence            999999999999999999998

>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A

Probab=99.56  E-value=2e-15  Score=126.17  Aligned_cols=79  Identities=14%  Similarity=0.298  Sum_probs=67.0

Q ss_pred             ccCHHHHHHHhhc--CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 018869          245 IWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (349)
Q Consensus       245 ~i~~~~v~~~~~~--~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~  322 (349)
                      +|+.+++++.++.  ++.+|||+|++.||           ..||||||+|+|+..+.             +.+. .++++
T Consensus         1 mIs~~el~~~l~~~~~~~~liDvR~~~e~-----------~~ghIpgAi~ip~~~l~-------------~~~~-~~l~~   55 (141)
T 3ilm_A            1 MSDAHVLKSRLEWGEPAFTILDVRDRSTY-----------NDGHIMGAMAMPIEDLV-------------DRAS-SSLEK   55 (141)
T ss_dssp             -CCHHHHHHHHHHSCSCEEEEECSCHHHH-----------HHCEETTCEECCGGGHH-------------HHHH-TTSCT
T ss_pred             CCCHHHHHHHHhcCCCCEEEEECCCHHHH-----------hCCCCCCCEEcCHHHHH-------------HHHH-hcCCC
Confidence            3788999998874  35899999999999           78999999999997653             2221 25889


Q ss_pred             CCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          323 EKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       323 ~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++||+||++|.||..++..|+..||
T Consensus        56 ~~~ivvyC~~g~rs~~aa~~L~~~G~   81 (141)
T 3ilm_A           56 SRDIYVYGAGDEQTSQAVNLLRSAGF   81 (141)
T ss_dssp             TSEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred             CCeEEEEECCChHHHHHHHHHHHcCC
Confidence            99999999999999999999999998

>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3

Probab=99.55  E-value=2.8e-15  Score=124.58  Aligned_cols=80  Identities=21%  Similarity=0.299  Sum_probs=69.1

Q ss_pred             ccCHHHHHHHhh-cCCceEEeccCCCcccccCCCCCCCCCc-cc--cCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 018869          245 IWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRS-GH--VPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (349)
Q Consensus       245 ~i~~~~v~~~~~-~~~~~lID~R~~~ey~G~~~~~~~~~~~-GH--IPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i  320 (349)
                      .++.+++.+.++ +++.+|||+|++.||           .. ||  ||||+|+|+..+..           ...+.  ++
T Consensus        24 ~is~~el~~~l~~~~~~~liDVR~~~E~-----------~~~gh~~IpgAinip~~~l~~-----------~~~~~--~l   79 (137)
T 1qxn_A           24 MLSPKDAYKLLQENPDITLIDVRDPDEL-----------KAMGKPDVKNYKHMSRGKLEP-----------LLAKS--GL   79 (137)
T ss_dssp             EECHHHHHHHHHHCTTSEEEECCCHHHH-----------HHTCEECCSSEEECCTTTSHH-----------HHHHH--CC
T ss_pred             ccCHHHHHHHHhcCCCeEEEECCCHHHH-----------HhcCCcCCCCCEEcchHHhhh-----------HHhhc--cC
Confidence            589999999987 667999999999999           66 99  99999999977632           11233  58


Q ss_pred             CCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          321 SLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       321 ~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++++||+||++|.||..++..|+..||
T Consensus        80 ~~~~~ivvyC~~G~rS~~aa~~L~~~G~  107 (137)
T 1qxn_A           80 DPEKPVVVFCKTAARAALAGKTLREYGF  107 (137)
T ss_dssp             CTTSCEEEECCSSSCHHHHHHHHHHHTC
T ss_pred             CCCCeEEEEcCCCcHHHHHHHHHHHcCC
Confidence            8999999999999999999999999998

>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A

Probab=99.55  E-value=3.4e-15  Score=125.21  Aligned_cols=80  Identities=21%  Similarity=0.289  Sum_probs=69.0

Q ss_pred             cccCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 018869          244 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (349)
Q Consensus       244 ~~i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~  321 (349)
                      ..++.+++.+.+.++  +.+|||+|++.||           ..||||||+|+|+.++....            +  .+++
T Consensus        16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey-----------~~ghIpgAinip~~~l~~~~------------~--~~l~   70 (144)
T 3nhv_A           16 YETDIADLSIDIKKGYEGIIVVDVRDAEAY-----------KECHIPTAISIPGNKINEDT------------T--KRLS   70 (144)
T ss_dssp             TEEEHHHHHHHHHTTCCSEEEEECSCHHHH-----------HHCBCTTCEECCGGGCSTTT------------T--TTCC
T ss_pred             cccCHHHHHHHHHcCCCCEEEEECcCHHHH-----------hcCCCCCCEECCHHHHhHHH------------H--hhCC
Confidence            357999999998764  6899999999999           78999999999999875321            1  1578


Q ss_pred             CCCCEEEEcCCh--HHHHHHHHHHHhCcC
Q 018869          322 LEKPVVTACGTG--VTACILALVLFPVFF  348 (349)
Q Consensus       322 ~~~~vivyC~~G--~rA~~~~~~L~~~g~  348 (349)
                      ++++||+||++|  .||..++..|+.+||
T Consensus        71 ~~~~ivvyC~~g~~~rs~~aa~~L~~~G~   99 (144)
T 3nhv_A           71 KEKVIITYCWGPACNGATKAAAKFAQLGF   99 (144)
T ss_dssp             TTSEEEEECSCTTCCHHHHHHHHHHHTTC
T ss_pred             CCCeEEEEECCCCccHHHHHHHHHHHCCC
Confidence            999999999999  799999999999998

>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}

Probab=99.55  E-value=6.5e-16  Score=123.49  Aligned_cols=69  Identities=19%  Similarity=0.214  Sum_probs=58.9

Q ss_pred             cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChHHH
Q 018869          257 EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTA  336 (349)
Q Consensus       257 ~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~rA  336 (349)
                      +++.+|||+|++.||           ..||||||+|+|+.++.             +.+.+.+++++++||+||++|.||
T Consensus        14 ~~~~~liDvR~~~e~-----------~~ghIpgAi~ip~~~l~-------------~~~~~~~~~~~~~ivvyC~~G~rs   69 (110)
T 2k0z_A           14 FNDFIVVDVRELDEY-----------EELHLPNATLISVNDQE-------------KLADFLSQHKDKKVLLHCRAGRRA   69 (110)
T ss_dssp             GGGSEEEEEECHHHH-----------HHSBCTTEEEEETTCHH-------------HHHHHHHSCSSSCEEEECSSSHHH
T ss_pred             cCCeEEEECCCHHHH-----------hcCcCCCCEEcCHHHHH-------------HHHHhcccCCCCEEEEEeCCCchH
Confidence            346899999999999           68999999999997653             233334588999999999999999


Q ss_pred             HHHHHHHHhCcCC
Q 018869          337 CILALVLFPVFFL  349 (349)
Q Consensus       337 ~~~~~~L~~~g~~  349 (349)
                      ..++..|+..||.
T Consensus        70 ~~aa~~L~~~G~~   82 (110)
T 2k0z_A           70 LDAAKSMHELGYT   82 (110)
T ss_dssp             HHHHHHHHHTTCC
T ss_pred             HHHHHHHHHCCCC
Confidence            9999999999983

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*

Probab=99.54  E-value=5.2e-15  Score=149.81  Aligned_cols=94  Identities=20%  Similarity=0.293  Sum_probs=78.2

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      .+.|++++|+++  +++.+|||||         ++.+|..||||||+|+|++.+....                 .  .+
T Consensus       472 ~~~i~~~~~~~~--~~~~~~iDvR---------~~~e~~~~~i~ga~~ip~~~l~~~~-----------------~--~~  521 (565)
T 3ntd_A          472 ATPIHFDQIDNL--SEDQLLLDVR---------NPGELQNGGLEGAVNIPVDELRDRM-----------------H--EL  521 (565)
T ss_dssp             CCEECTTTTTSC--CTTEEEEECS---------CGGGGGGCCCTTCEECCGGGTTTSG-----------------G--GS
T ss_pred             cceeeHHHHHhC--CCCcEEEEeC---------CHHHHhcCCCCCcEECCHHHHHHHH-----------------h--hc
Confidence            345777777666  4578999999         7899999999999999998764321                 1  14


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCC
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASG  200 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G  200 (349)
                      +++++||+||..|. +|.++++.|+.+|| +|++|+||+.+|.++|
T Consensus       522 ~~~~~iv~~c~~g~-rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g  565 (565)
T 3ntd_A          522 PKDKEIIIFSQVGL-RGNVAYRQLVNNGY-RARNLIGGYRTYKFAS  565 (565)
T ss_dssp             CTTSEEEEECSSSH-HHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred             CCcCeEEEEeCCch-HHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence            67899999998665 89999999999999 9999999999999875

>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}

Probab=99.54  E-value=2.8e-15  Score=124.47  Aligned_cols=83  Identities=16%  Similarity=0.144  Sum_probs=68.4

Q ss_pred             ccCHHHHHHHhh--cCCceEEeccCCCcccccCCCCCCCCCc-cccCCCcccCcccccC---CCCCCCCHHHHHHHHHHc
Q 018869          245 IWTLEQVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRS-GHVPGSKCIPFPQMLD---ASQTLLPADELKKRFEQE  318 (349)
Q Consensus       245 ~i~~~~v~~~~~--~~~~~lID~R~~~ey~G~~~~~~~~~~~-GHIPGA~~ip~~~l~~---~~~~l~~~~el~~~~~~~  318 (349)
                      .++.+++.+.++  +++.+|||+|++.||           .. ||||||+|+|+..+..   ....+.          ..
T Consensus        23 ~is~~~l~~~l~~~~~~~~liDvR~~~e~-----------~~~ghIpgA~~ip~~~l~~~~~~~~~~~----------~~   81 (139)
T 2hhg_A           23 TLTTADAIALHKSGASDVVIVDIRDPREI-----------ERDGKIPGSFSCTRGMLEFWIDPQSPYA----------KP   81 (139)
T ss_dssp             EECHHHHHHHHHTTCTTEEEEECSCHHHH-----------HHHCCCTTCEECCGGGHHHHHCTTSTTC----------CG
T ss_pred             ccCHHHHHHHHhccCCCeEEEECCCHHHH-----------HhCCCCCCeEECChHHHHHhcCccchhh----------hc
Confidence            689999999988  567899999999999           67 9999999999987632   111000          11


Q ss_pred             CCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          319 GISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       319 ~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++++++||+||++|.||+.++..|+..||
T Consensus        82 ~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~  111 (139)
T 2hhg_A           82 IFQEDKKFVFYCAGGLRSALAAKTAQDMGL  111 (139)
T ss_dssp             GGGSSSEEEEECSSSHHHHHHHHHHHHHTC
T ss_pred             cCCCCCeEEEECCCChHHHHHHHHHHHcCC
Confidence            367899999999999999999999999998

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*

Probab=99.53  E-value=2.1e-15  Score=153.73  Aligned_cols=95  Identities=16%  Similarity=0.161  Sum_probs=80.4

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ..+.|++++|++++++ +.+|||||         ++.+|..||||||+|+|++.+...                 +.  .
T Consensus       487 ~~~~i~~~~~~~~~~~-~~~~iDvR---------~~~e~~~ghi~ga~~ip~~~l~~~-----------------~~--~  537 (588)
T 3ics_A          487 FVDTVQWHEIDRIVEN-GGYLIDVR---------EPNELKQGMIKGSINIPLDELRDR-----------------LE--E  537 (588)
T ss_dssp             SCCEECTTTHHHHHHT-TCEEEECS---------CGGGGGGCBCTTEEECCHHHHTTC-----------------GG--G
T ss_pred             ccceecHHHHHHHhcC-CCEEEEcC---------CHHHHhcCCCCCCEECCHHHHHHH-----------------Hh--h
Confidence            4567999999998854 68999999         789999999999999999766432                 11  2


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhC
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRAS  199 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~  199 (349)
                      ++++++||+||..|. ++.++++.|+.+||+ |++|+||+.+|.+.
T Consensus       538 l~~~~~iv~~C~~g~-rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~  581 (588)
T 3ics_A          538 VPVDKDIYITCQLGM-RGYVAARMLMEKGYK-VKNVDGGFKLYGTV  581 (588)
T ss_dssp             SCSSSCEEEECSSSH-HHHHHHHHHHHTTCC-EEEETTHHHHHHHH
T ss_pred             CCCCCeEEEECCCCc-HHHHHHHHHHHcCCc-EEEEcchHHHHHhh
Confidence            467899999997664 899999999999998 99999999999864

>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A

Probab=99.52  E-value=5.9e-15  Score=120.45  Aligned_cols=80  Identities=21%  Similarity=0.277  Sum_probs=67.3

Q ss_pred             cccCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCC
Q 018869          244 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGIS  321 (349)
Q Consensus       244 ~~i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~  321 (349)
                      ..++.+++.+.++++  +.+|||+|++.||.          ..||||||+|+|+.++             .+.+.  .++
T Consensus        15 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~----------~~ghIpgA~nip~~~l-------------~~~~~--~l~   69 (124)
T 3flh_A           15 LYIDHHTVLADMQNATGKYVVLDVRNAPAQV----------KKDQIKGAIAMPAKDL-------------ATRIG--ELD   69 (124)
T ss_dssp             TEECHHHHHHHHHHTCCCEEEEECCCSCHHH----------HCCEETTCEECCHHHH-------------HHHGG--GSC
T ss_pred             ceecHHHHHHHHHcCCCCEEEEECCCHHHHH----------hcCcCCCCEECCHHHH-------------HHHHh--cCC
Confidence            368999999988764  48999999999972          4699999999998554             34444  378


Q ss_pred             CCCCEEEEcCChHH--HHHHHHHHHhCcC
Q 018869          322 LEKPVVTACGTGVT--ACILALVLFPVFF  348 (349)
Q Consensus       322 ~~~~vivyC~~G~r--A~~~~~~L~~~g~  348 (349)
                      ++++||+||++|.|  |..++..|+..||
T Consensus        70 ~~~~ivvyC~~g~r~~s~~a~~~L~~~G~   98 (124)
T 3flh_A           70 PAKTYVVYDWTGGTTLGKTALLVLLSAGF   98 (124)
T ss_dssp             TTSEEEEECSSSSCSHHHHHHHHHHHHTC
T ss_pred             CCCeEEEEeCCCCchHHHHHHHHHHHcCC
Confidence            89999999999999  8999999999998

>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}

Probab=99.50  E-value=9e-15  Score=120.10  Aligned_cols=88  Identities=13%  Similarity=0.249  Sum_probs=66.3

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCC---------CC-----------
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---------QT-----------  304 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~---------~~-----------  304 (349)
                      .++.+++.+   +++.+|||+|++.||           ..||||||+|+|+..+....         +.           
T Consensus         6 ~i~~~el~~---~~~~~iiDvR~~~e~-----------~~ghIpgA~nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (134)
T 3g5j_A            6 VIKIEKALK---LDKVIFVDVRTEGEY-----------EEDHILNAINMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYV   71 (134)
T ss_dssp             EECHHHHTT---CTTEEEEECSCHHHH-----------HHCCCTTCEECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ccCHHHHHh---cCCcEEEEcCCHHHH-----------hcCCCCCCEEcCccchhhhhcccceeeecChhHHHhcccccc
Confidence            467777765   567899999999999           78999999999997543110         00           


Q ss_pred             CCCHHHHHHHHHHcCCCCC-CCEEEEc-CChHHHHHHHHHHHhCcC
Q 018869          305 LLPADELKKRFEQEGISLE-KPVVTAC-GTGVTACILALVLFPVFF  348 (349)
Q Consensus       305 l~~~~el~~~~~~~~i~~~-~~vivyC-~~G~rA~~~~~~L~~~g~  348 (349)
                      ....+++.+.+.+  ++++ ++||+|| ++|.||+.++..|+.+||
T Consensus        72 ~~~~~~~~~~~~~--~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~  115 (134)
T 3g5j_A           72 SYKLKDIYLQAAE--LALNYDNIVIYCARGGMRSGSIVNLLSSLGV  115 (134)
T ss_dssp             GGGHHHHHHHHHH--HHTTCSEEEEECSSSSHHHHHHHHHHHHTTC
T ss_pred             cccHHHHHHHHHH--hccCCCeEEEEECCCChHHHHHHHHHHHcCC
Confidence            0011345555554  6777 9999999 699999999999999998

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=99.48  E-value=3.2e-15  Score=148.51  Aligned_cols=87  Identities=13%  Similarity=0.171  Sum_probs=0.0

Q ss_pred             HHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCCCCCcEEE
Q 018869           83 LHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVV  162 (349)
Q Consensus        83 L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~~~~~VVv  162 (349)
                      +++++++++.+|||||         +.++|..||||||+|+|+.++..                 .+..  ++++++||+
T Consensus       379 ~~~~~~~~~~~liDvR---------~~~e~~~ghIpgA~~ip~~~l~~-----------------~~~~--l~~~~~iv~  430 (466)
T 3r2u_A          379 HSEDITGNESHILDVR---------NDNEWNNGHLSQAVHVPHGKLLE-----------------TDLP--FNKNDVIYV  430 (466)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHhCCCcEEEEeC---------CHHHHhcCcCCCCEECCHHHHHH-----------------HHhh--CCCCCeEEE
Confidence            5555666678999999         78899999999999999976542                 1221  467899999


Q ss_pred             ECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh
Q 018869          163 YDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA  198 (349)
Q Consensus       163 y~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~  198 (349)
                      ||..|. +|+.+++.|+.+||++|++|+|||.+|.+
T Consensus       431 ~C~~G~-rs~~a~~~L~~~G~~~v~~l~GG~~~W~~  465 (466)
T 3r2u_A          431 HCQSGI-RSSIAIGILEHKGYHNIINVNEGYKDIQL  465 (466)
T ss_dssp             ------------------------------------
T ss_pred             ECCCCh-HHHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence            998765 89999999999999999999999999975

>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A

Probab=99.43  E-value=7.2e-14  Score=115.48  Aligned_cols=92  Identities=12%  Similarity=0.019  Sum_probs=68.8

Q ss_pred             ccCHHHHHHHhh-cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcC-CCC
Q 018869          245 IWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEG-ISL  322 (349)
Q Consensus       245 ~i~~~~v~~~~~-~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~-i~~  322 (349)
                      .++.+++.+.++ +++.+|||||++.||...-. +   ...||||||+|||+.++.        ..++.+.+.+.. +++
T Consensus         6 ~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~-~---~~~g~~~ga~~ip~~~~~--------~~~~~~~l~~~~~~~~   73 (134)
T 1vee_A            6 SGSAKNAYTKLGTDDNAQLLDIRATADFRQVGS-P---NIKGLGKKAVSTVYNGED--------KPGFLKKLSLKFKDPE   73 (134)
T ss_dssp             BCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCE-E---CCTTTSCCCEECCCCGGG--------HHHHHHHHHTTCSCGG
T ss_pred             ccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCC-C---cccccCCceEEeeccccc--------ChhHHHHHHHHhCCCC
Confidence            478899998887 46789999999999952110 0   034777999999987641        123333444322 378


Q ss_pred             CCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          323 EKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       323 ~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++||+||++|.||..++..|+.+||
T Consensus        74 ~~~ivv~C~sG~RS~~aa~~L~~~G~   99 (134)
T 1vee_A           74 NTTLYILDKFDGNSELVAELVALNGF   99 (134)
T ss_dssp             GCEEEEECSSSTTHHHHHHHHHHHTC
T ss_pred             CCEEEEEeCCCCcHHHHHHHHHHcCC
Confidence            89999999999999999999999998

>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}

Probab=99.42  E-value=1.2e-13  Score=126.84  Aligned_cols=88  Identities=13%  Similarity=0.160  Sum_probs=73.0

Q ss_pred             CCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 018869          241 QPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (349)
Q Consensus       241 ~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i  320 (349)
                      .....++.+++.+.+++++.+|||+|++.||           ..||||||+|+|+..+.+.      ++.+.+.+   +.
T Consensus       119 ~~~~~Is~~el~~ll~~~~~vlIDVR~~~Ey-----------~~GHIpGAiniP~~~~~~~------~~~l~~~l---~~  178 (265)
T 4f67_A          119 NAGTYLSPEEWHQFIQDPNVILLDTRNDYEY-----------ELGTFKNAINPDIENFREF------PDYVQRNL---ID  178 (265)
T ss_dssp             CTTCEECHHHHHHHTTCTTSEEEECSCHHHH-----------HHEEETTCBCCCCSSGGGH------HHHHHHHT---GG
T ss_pred             CCCceECHHHHHHHhcCCCeEEEEeCCchHh-----------hcCcCCCCEeCCHHHHHhh------HHHHHHhh---hh
Confidence            3455789999999998888999999999999           7899999999999876421      12233332   35


Q ss_pred             CCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          321 SLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       321 ~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++++||+||.+|.||..++..|+..||
T Consensus       179 ~kdk~IVvyC~~G~RS~~Aa~~L~~~Gf  206 (265)
T 4f67_A          179 KKDKKIAMFCTGGIRCEKTTAYMKELGF  206 (265)
T ss_dssp             GTTSCEEEECSSSHHHHHHHHHHHHHTC
T ss_pred             CCCCeEEEEeCCChHHHHHHHHHHHcCC
Confidence            7899999999999999999999999998

>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1

Probab=99.42  E-value=2.5e-14  Score=120.66  Aligned_cols=91  Identities=20%  Similarity=0.282  Sum_probs=68.7

Q ss_pred             ccCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCccccc--C---C---CCCCCCHHHHHHH
Q 018869          245 IWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML--D---A---SQTLLPADELKKR  314 (349)
Q Consensus       245 ~i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~--~---~---~~~l~~~~el~~~  314 (349)
                      .++.+++.+.++++  +.+|||+|++.||           ..||||||+|+|+..+.  +   .   -..+++.++.++.
T Consensus        17 ~is~~~l~~~l~~~~~~~~liDvR~~~ey-----------~~gHIpgAinip~~~~~~~~~~~~~~~~~~~l~~~~~~~~   85 (154)
T 1hzm_A           17 SKTVAWLNEQLELGNERLLLMDCRPQELY-----------ESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRDR   85 (154)
T ss_dssp             BSCCCCHHHHHHHCSSSCEEECCSTTHHH-----------HHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHHH
T ss_pred             ccCHHHHHHHHhCCCCCEEEEEcCCHHHH-----------hhccccCceEeCccHHHHhhhhcCcccHHHhCCCHHHHHH
Confidence            57778888888765  7899999999999           78999999999998754  1   1   1134444455666


Q ss_pred             HHHcCCCCCCCEEEEcCChHHH-------HHHHHHHHhC---cC
Q 018869          315 FEQEGISLEKPVVTACGTGVTA-------CILALVLFPV---FF  348 (349)
Q Consensus       315 ~~~~~i~~~~~vivyC~~G~rA-------~~~~~~L~~~---g~  348 (349)
                      |..  ++++++||+||++|.++       ..+++.|+.+   ||
T Consensus        86 ~~~--~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~  127 (154)
T 1hzm_A           86 FTR--RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGC  127 (154)
T ss_dssp             HHH--STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTC
T ss_pred             Hhc--cCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCC
Confidence            764  77889999999999875       4456677755   87

>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1

Probab=99.39  E-value=6e-14  Score=118.60  Aligned_cols=78  Identities=18%  Similarity=0.171  Sum_probs=63.0

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .++.+++.+.+++++.+|||+|++.||           ..||||||+|+|+.++.+         .+.+++.+  +++++
T Consensus        29 ~Is~~el~~~l~~~~~~lIDvR~~~ey-----------~~ghIpgAinip~~~l~~---------~~~~l~~~--~~~~~   86 (152)
T 1t3k_A           29 YITSTQLLPLHRRPNIAIIDVRDEERN-----------YDGHIAGSLHYASGSFDD---------KISHLVQN--VKDKD   86 (152)
T ss_dssp             EECTTTTTTCCCCTTEEEEEESCSHHH-----------HSSCCCSSEEECCSSSST---------THHHHHHT--CCSCC
T ss_pred             eECHHHHHHHhcCCCEEEEECCChhhc-----------cCccCCCCEECCHHHHHH---------HHHHHHHh--cCCCC
Confidence            577788887776667899999999999           679999999999987643         24444443  57889


Q ss_pred             CEEEEcC-ChHHHHHHHHHHH
Q 018869          325 PVVTACG-TGVTACILALVLF  344 (349)
Q Consensus       325 ~vivyC~-~G~rA~~~~~~L~  344 (349)
                      +||+||+ +|.|+..++..|.
T Consensus        87 ~iVvyC~~~G~rs~~aa~~L~  107 (152)
T 1t3k_A           87 TLVFHSALSQVRGPTCARRLV  107 (152)
T ss_dssp             EEEESSSCCSSSHHHHHHHHH
T ss_pred             EEEEEcCCCCcchHHHHHHHH
Confidence            9999999 9999888877663

>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A

Probab=99.38  E-value=2.3e-14  Score=120.88  Aligned_cols=92  Identities=16%  Similarity=0.194  Sum_probs=66.4

Q ss_pred             ccCHHHHHHHhhc--CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCC---CCCCCCHHHHH--HHHHH
Q 018869          245 IWTLEQVKRNIEE--GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA---SQTLLPADELK--KRFEQ  317 (349)
Q Consensus       245 ~i~~~~v~~~~~~--~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~---~~~l~~~~el~--~~~~~  317 (349)
                      .|+.+++.+.+++  ++.+|||+|++.||           ..||||||+|+|+..++..   .+. .+.++|.  +....
T Consensus         5 ~Is~~~l~~~l~~~~~~~~iiDvR~~~ey-----------~~gHIpgAinip~~~l~~~~~~~~~-~~~~~ll~~~~~~~   72 (153)
T 2vsw_A            5 QIVTERLVALLESGTEKVLLIDSRPFVEY-----------NTSHILEAININCSKLMKRRLQQDK-VLITELIQHSAKHK   72 (153)
T ss_dssp             EECHHHHHHHHTSTTCCEEEEECSCHHHH-----------HHCEETTCEECCCCHHHHHHHHTTS-SCHHHHHHHSCSSC
T ss_pred             cccHHHHHHHHhcCCCCEEEEECCCHHHh-----------ccCccCCCeeeChHHHHHhhhhcCC-cCHHHhcCchhhhh
Confidence            4788999998863  57899999999999           6899999999999887421   122 2233331  11122


Q ss_pred             cCCCCCCCEEEEcCChHHHHHH------HHHHHhC--cC
Q 018869          318 EGISLEKPVVTACGTGVTACIL------ALVLFPV--FF  348 (349)
Q Consensus       318 ~~i~~~~~vivyC~~G~rA~~~------~~~L~~~--g~  348 (349)
                      .+++++++||+||++|.++..+      +.+|+.+  ||
T Consensus        73 ~~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~  111 (153)
T 2vsw_A           73 VDIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSF  111 (153)
T ss_dssp             CCCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHC
T ss_pred             hccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCC
Confidence            3578899999999999988655      5667644  76

>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}

Probab=99.36  E-value=5.9e-13  Score=112.43  Aligned_cols=84  Identities=17%  Similarity=0.143  Sum_probs=62.7

Q ss_pred             ccCHHHHHHHhhcC----CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 018869          245 IWTLEQVKRNIEEG----TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (349)
Q Consensus       245 ~i~~~~v~~~~~~~----~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i  320 (349)
                      .++.+++.+.++++    +.+|||+|++ ||           ..||||||+|+|+..+.+.     ..++|.+.+..   
T Consensus         6 ~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey-----------~~gHIpGAinip~~~l~~~-----~~~~l~~~l~~---   65 (152)
T 2j6p_A            6 YIKPEELVELLDNPDSLVKAAVIDCRDS-DR-----------DCGFIVNSINMPTISCTEE-----MYEKLAKTLFE---   65 (152)
T ss_dssp             EECHHHHHHHHHSHHHHHTEEEEECCST-TG-----------GGCBCTTCEECCTTTCCHH-----HHHHHHHHHHH---
T ss_pred             ccCHHHHHHHHhCCCCCCCEEEEEcCcH-Hh-----------CcCcCCCcEECChhHhhHH-----HHHHHHHHhcc---
Confidence            57889999888763    7899999999 99           6799999999999876421     12345555543   


Q ss_pred             CCCCCEEEEc-CChHHHHHHH----HHHHhCcC
Q 018869          321 SLEKPVVTAC-GTGVTACILA----LVLFPVFF  348 (349)
Q Consensus       321 ~~~~~vivyC-~~G~rA~~~~----~~L~~~g~  348 (349)
                      ...+.||+|| .+|.|+..++    ..|+.+||
T Consensus        66 ~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~   98 (152)
T 2j6p_A           66 EKKELAVFHCAQSLVRAPKGANRFALAQKKLGY   98 (152)
T ss_dssp             TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTC
T ss_pred             cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCC
Confidence            1234577789 7999998877    66777886

>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}

Probab=99.33  E-value=9.3e-14  Score=115.02  Aligned_cols=93  Identities=10%  Similarity=0.051  Sum_probs=58.7

Q ss_pred             ccCHHHHHH--------HhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH
Q 018869          245 IWTLEQVKR--------NIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE  316 (349)
Q Consensus       245 ~i~~~~v~~--------~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~  316 (349)
                      .|+.+++.+        .+++++.+|||+|++.||           ..||||||+|+|+.+++...........+.+.+.
T Consensus         2 ~Is~~~l~~~l~~~~~~~l~~~~~~iiDvR~~~e~-----------~~ghIpgA~~ip~~~~~~~~~~~~~~~~~~~~~~   70 (142)
T 2ouc_A            2 IIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEY-----------NKSHIQGAVHINCADKISRRRLQQGKITVLDLIS   70 (142)
T ss_dssp             EECHHHHHHHHHC----------CEEEECSCHHHH-----------HHEEETTCEECCCSSHHHHHHHHTTSSCHHHHHH
T ss_pred             ccCHHHHHHHHHhcccccCCCCCCEEEEeCCHHHh-----------hhhhccCccccCccHHHHHHHhhcCCcchhhhCC
Confidence            467888888        566667899999999999           6799999999999876431000000011222222


Q ss_pred             HcCC-C-----CCCCEEEEcCChHHHH---------HHHHHHHhCcC
Q 018869          317 QEGI-S-----LEKPVVTACGTGVTAC---------ILALVLFPVFF  348 (349)
Q Consensus       317 ~~~i-~-----~~~~vivyC~~G~rA~---------~~~~~L~~~g~  348 (349)
                      ..+. .     .+++||+||++|.+|+         .++..|...||
T Consensus        71 ~~~~~~~~~~~~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~  117 (142)
T 2ouc_A           71 CREGKDSFKRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK  117 (142)
T ss_dssp             TTSCTTHHHHHHHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC
T ss_pred             ChhhhHHHhccCCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC
Confidence            1111 1     2689999999999853         46667788887

>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}

Probab=99.33  E-value=1.4e-13  Score=117.04  Aligned_cols=91  Identities=14%  Similarity=0.148  Sum_probs=64.8

Q ss_pred             cccCHHHHHHHhh--------cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCccccc-----CCCCC----CC
Q 018869          244 LIWTLEQVKRNIE--------EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQML-----DASQT----LL  306 (349)
Q Consensus       244 ~~i~~~~v~~~~~--------~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~-----~~~~~----l~  306 (349)
                      ..|+.+++.+.++        +++.+|||+|++.||           ..||||||+|+|+..++     ..+..    ++
T Consensus        11 ~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~-----------~~ghI~ga~~i~~~~l~~~~~~~~~~~~~~~~~   79 (158)
T 3tg1_B           11 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEY-----------NKSHIQGAVHINCADKISRRRLQQGKITVLDLI   79 (158)
T ss_dssp             CEECHHHHHHHHCC----------CEEEECSCHHHH-----------HHCCBTTCEECCCSSHHHHHHHTTSSCCHHHHT
T ss_pred             cEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHH-----------HhCCCCCceeechhHHHHHhhhhcCcccHHhhc
Confidence            3689999999887        346899999999999           78999999999999874     21110    00


Q ss_pred             CHHHHHHHHHHcCCCCCCCEEEEcCCh---------HHHHHHHHHHHhCcC
Q 018869          307 PADELKKRFEQEGISLEKPVVTACGTG---------VTACILALVLFPVFF  348 (349)
Q Consensus       307 ~~~el~~~~~~~~i~~~~~vivyC~~G---------~rA~~~~~~L~~~g~  348 (349)
                      +..+.++.+   ...++++||+||++|         .+|+.++..|+..||
T Consensus        80 ~~~~~~~~~---~~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~  127 (158)
T 3tg1_B           80 SCREGKDSF---KRIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK  127 (158)
T ss_dssp             CCCCSSCSS---TTTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC
T ss_pred             CCHHHHHHH---hccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC
Confidence            000000111   112478999999999         569999999999998

>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*

Probab=99.28  E-value=1.7e-12  Score=111.67  Aligned_cols=85  Identities=20%  Similarity=0.308  Sum_probs=62.1

Q ss_pred             ccCHHHHHHHhhcC-------CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 018869          245 IWTLEQVKRNIEEG-------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (349)
Q Consensus       245 ~i~~~~v~~~~~~~-------~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~  317 (349)
                      .|+.+++.++++++       +.+|||+|+ .||           ..||||||+|+|+..+...   ....++|.+.+.+
T Consensus        32 ~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey-----------~~GHIpGAiniP~~~l~~~---~~~l~~l~~~~~~   96 (169)
T 3f4a_A           32 YLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDY-----------MGGHIKDGWHYAYSRLKQD---PEYLRELKHRLLE   96 (169)
T ss_dssp             EECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTC-----------TTCEETTCEECCHHHHHHC---HHHHHHHHHHHHH
T ss_pred             EeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHH-----------ccCcCCCCEECCHHHhhcc---cccHHHHHHHHHh
Confidence            68999999998753       489999999 889           6799999999999887542   1113455444443


Q ss_pred             cCCC--CCCCEEEEcCCh-HHHHHHHHHHH
Q 018869          318 EGIS--LEKPVVTACGTG-VTACILALVLF  344 (349)
Q Consensus       318 ~~i~--~~~~vivyC~~G-~rA~~~~~~L~  344 (349)
                      .+++  .+++||+||.+| .|+..++..|.
T Consensus        97 ~~~~~~~~~~IVvyC~sG~~Rs~~aa~~l~  126 (169)
T 3f4a_A           97 KQADGRGALNVIFHCMLSQQRGPSAAMLLL  126 (169)
T ss_dssp             HHHTSSSCEEEEEECSSSSSHHHHHHHHHH
T ss_pred             hcccccCCCeEEEEeCCCCCcHHHHHHHHH
Confidence            3332  247999999997 88877765553

>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}

Probab=99.25  E-value=2.5e-12  Score=114.81  Aligned_cols=80  Identities=18%  Similarity=0.218  Sum_probs=60.6

Q ss_pred             cccCHHHHHHHhhcC------CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 018869          244 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (349)
Q Consensus       244 ~~i~~~~v~~~~~~~------~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~  317 (349)
                      ..|+.+++.+.++++      +++|||+|++.||           ..||||||+|||+.+            .+.+.+.+
T Consensus        57 ~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey-----------~~GHIpGAinIP~~~------------~l~~~l~~  113 (216)
T 3op3_A           57 KYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEY-----------LGGHIQGALNLYSQE------------ELFNFFLK  113 (216)
T ss_dssp             EEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTSEETTCEECCSHH------------HHHHHHTS
T ss_pred             CEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHH-----------hcCCccCCEECChHH------------HHHHHHhh
Confidence            358999999999765      6899999999999           679999999999854            23333332


Q ss_pred             cC---CCCCC--CEEEEcC-ChHHHHHHHHHHHhC
Q 018869          318 EG---ISLEK--PVVTACG-TGVTACILALVLFPV  346 (349)
Q Consensus       318 ~~---i~~~~--~vivyC~-~G~rA~~~~~~L~~~  346 (349)
                      .+   .++++  +||+||. +|.||..++..|+..
T Consensus       114 ~~~~~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~  148 (216)
T 3op3_A          114 KPIVPLDTQKRIIIVFHCEFSSERGPRMCRCLREE  148 (216)
T ss_dssp             SCCCCSSTTSEEEEEEECCC--CCHHHHHHHHHHH
T ss_pred             ccccccccCCCCEEEEEeCCCChHHHHHHHHHHHc
Confidence            22   23344  4999999 999999999999875

>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A

Probab=99.24  E-value=4.1e-12  Score=113.10  Aligned_cols=79  Identities=15%  Similarity=0.222  Sum_probs=62.4

Q ss_pred             cccCHHHHHHHhhcC------CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH-
Q 018869          244 LIWTLEQVKRNIEEG------TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE-  316 (349)
Q Consensus       244 ~~i~~~~v~~~~~~~------~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~-  316 (349)
                      ..++.+++.+.++++      +.+|||+|++.||           ..||||||+|+|+.++..            ..+. 
T Consensus        44 ~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey-----------~~gHIpGAinip~~~l~~------------~~~~~  100 (211)
T 1qb0_A           44 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEY-----------EGGHIKTAVNLPLERDAE------------SFLLK  100 (211)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHH------------HHHHT
T ss_pred             CeeCHHHHHHHHhcccccCCCCEEEEECCCHHHH-----------ccCcCCCCEECCchHHHH------------Hhhhh
Confidence            468999999988753      6889999999999           679999999999876532            1122 


Q ss_pred             --HcCCCCCCCE--EEEcC-ChHHHHHHHHHHHh
Q 018869          317 --QEGISLEKPV--VTACG-TGVTACILALVLFP  345 (349)
Q Consensus       317 --~~~i~~~~~v--ivyC~-~G~rA~~~~~~L~~  345 (349)
                        ..+++++++|  |+||+ +|.||..++..|+.
T Consensus       101 ~~~l~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~  134 (211)
T 1qb0_A          101 SPIAPCSLDKRVILIFHCEFSSERGPRMCRFIRE  134 (211)
T ss_dssp             TTCCCSSTTSEEEEEEECSSSSSHHHHHHHHHHH
T ss_pred             hhhccccCCCCeEEEEECCCCCccHHHHHHHHHh
Confidence              1123478887  88999 99999999998875

>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1

Probab=99.22  E-value=3.5e-12  Score=108.40  Aligned_cols=79  Identities=13%  Similarity=0.183  Sum_probs=61.5

Q ss_pred             cccCHHHHHHHhhc------CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 018869          244 LIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (349)
Q Consensus       244 ~~i~~~~v~~~~~~------~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~  317 (349)
                      ..++.+++.+.+++      ++.+|||+|++.||           ..||||||+|+|+.++...            .+.+
T Consensus        23 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~-----------~~ghIpgAinip~~~~~~~------------~~~~   79 (161)
T 1c25_A           23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEY-----------EGGHIKGAVNLHMEEEVED------------FLLK   79 (161)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHHH------------HTTT
T ss_pred             ceeCHHHHHHHHhccccccCCCeEEEECCChHHc-----------cCCcccCcEeCChhHHHHH------------HHhh
Confidence            36899999998875      36889999999999           6799999999999765321            1111


Q ss_pred             c--CCCCCCCE--EEEcC-ChHHHHHHHHHHHh
Q 018869          318 E--GISLEKPV--VTACG-TGVTACILALVLFP  345 (349)
Q Consensus       318 ~--~i~~~~~v--ivyC~-~G~rA~~~~~~L~~  345 (349)
                      .  -.+++++|  |+||. +|.||..++..|+.
T Consensus        80 ~~~~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~  112 (161)
T 1c25_A           80 KPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRE  112 (161)
T ss_dssp             SCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHH
T ss_pred             hhhccCCCCCeEEEEEcCCCCcchHHHHHHHHH
Confidence            1  12567886  68999 99999999999875

>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A

Probab=99.21  E-value=5.9e-12  Score=108.55  Aligned_cols=79  Identities=14%  Similarity=0.201  Sum_probs=59.1

Q ss_pred             cccCHHHHHHHhhc------CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH
Q 018869          244 LIWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ  317 (349)
Q Consensus       244 ~~i~~~~v~~~~~~------~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~  317 (349)
                      ..++.+++.+.+++      ++.+|||+|++.||           ..||||||+|+|+.++...            .+..
T Consensus        24 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey-----------~~ghIpgAinip~~~l~~~------------~~~~   80 (175)
T 2a2k_A           24 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEY-----------EGGHIKTAVNLPLERDAES------------FLLK   80 (175)
T ss_dssp             CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHHH------------HHHS
T ss_pred             ceeCHHHHHHHHhcccccCCCCEEEEECCCHHHH-----------cCCcCCCcEECChhHHHHH------------hhhh
Confidence            46899999998875      36889999999999           6799999999998765321            1111


Q ss_pred             ---cCCCCCCCEEE--EcC-ChHHHHHHHHHHHh
Q 018869          318 ---EGISLEKPVVT--ACG-TGVTACILALVLFP  345 (349)
Q Consensus       318 ---~~i~~~~~viv--yC~-~G~rA~~~~~~L~~  345 (349)
                         .+++++++||+  ||+ +|.||..++..|++
T Consensus        81 ~~~~~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~  114 (175)
T 2a2k_A           81 SPIAPCSLDKRVILIFHSEFSSERGPRMCRFIRE  114 (175)
T ss_dssp             SCCCC----CEEEEEEECSSSSSHHHHHHHHHHH
T ss_pred             hhhccccCCCCeEEEEECCCCCCccHHHHHHHHH
Confidence               12347888854  699 99999999998884

>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*

Probab=99.18  E-value=9e-12  Score=126.84  Aligned_cols=78  Identities=22%  Similarity=0.414  Sum_probs=66.5

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .++.+++.+.++ ++.+|||+|++.||           ..||||||+|+|+.++.+.             +.  .+++++
T Consensus       490 ~i~~~~~~~~~~-~~~~~iDvR~~~e~-----------~~ghi~ga~~ip~~~l~~~-------------~~--~l~~~~  542 (588)
T 3ics_A          490 TVQWHEIDRIVE-NGGYLIDVREPNEL-----------KQGMIKGSINIPLDELRDR-------------LE--EVPVDK  542 (588)
T ss_dssp             EECTTTHHHHHH-TTCEEEECSCGGGG-----------GGCBCTTEEECCHHHHTTC-------------GG--GSCSSS
T ss_pred             eecHHHHHHHhc-CCCEEEEcCCHHHH-----------hcCCCCCCEECCHHHHHHH-------------Hh--hCCCCC
Confidence            478888888875 46899999999999           7899999999998766432             22  278899


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcCC
Q 018869          325 PVVTACGTGVTACILALVLFPVFFL  349 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~~  349 (349)
                      +||+||++|.||..++..|+..||.
T Consensus       543 ~iv~~C~~g~rs~~a~~~l~~~G~~  567 (588)
T 3ics_A          543 DIYITCQLGMRGYVAARMLMEKGYK  567 (588)
T ss_dssp             CEEEECSSSHHHHHHHHHHHHTTCC
T ss_pred             eEEEECCCCcHHHHHHHHHHHcCCc
Confidence            9999999999999999999999983

>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*

Probab=99.13  E-value=1.6e-11  Score=124.14  Aligned_cols=75  Identities=16%  Similarity=0.291  Sum_probs=61.4

Q ss_pred             cCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 018869          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (349)
Q Consensus       246 i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~  325 (349)
                      ++.+++.+.  +++.+|||+|++.||           ..||||||+|+|++++.+.             +.  .++++++
T Consensus       475 i~~~~~~~~--~~~~~~iDvR~~~e~-----------~~~~i~ga~~ip~~~l~~~-------------~~--~~~~~~~  526 (565)
T 3ntd_A          475 IHFDQIDNL--SEDQLLLDVRNPGEL-----------QNGGLEGAVNIPVDELRDR-------------MH--ELPKDKE  526 (565)
T ss_dssp             ECTTTTTSC--CTTEEEEECSCGGGG-----------GGCCCTTCEECCGGGTTTS-------------GG--GSCTTSE
T ss_pred             eeHHHHHhC--CCCcEEEEeCCHHHH-----------hcCCCCCcEECCHHHHHHH-------------Hh--hcCCcCe
Confidence            444444433  456889999999999           6789999999999877532             22  2788999


Q ss_pred             EEEEcCChHHHHHHHHHHHhCcC
Q 018869          326 VVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       326 vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ||+||++|.||..++..|+..||
T Consensus       527 iv~~c~~g~rs~~a~~~l~~~G~  549 (565)
T 3ntd_A          527 IIIFSQVGLRGNVAYRQLVNNGY  549 (565)
T ss_dssp             EEEECSSSHHHHHHHHHHHHTTC
T ss_pred             EEEEeCCchHHHHHHHHHHHcCC
Confidence            99999999999999999999998

>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4

Probab=98.97  E-value=2.1e-10  Score=97.15  Aligned_cols=77  Identities=16%  Similarity=0.184  Sum_probs=55.2

Q ss_pred             ccCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCC-----CCCCHHHHHHHHHH
Q 018869          245 IWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ-----TLLPADELKKRFEQ  317 (349)
Q Consensus       245 ~i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~-----~l~~~~el~~~~~~  317 (349)
                      .++.+++.+.++++  +.+|||+|++.||           ..||||||+|||+..+.....     ..++ +..+++|..
T Consensus        21 ~is~~~l~~~l~~~~~~~~liDvR~~~ey-----------~~gHI~gAinip~~~l~~~~~~~~l~~~lp-~~~~~l~~~   88 (157)
T 2gwf_A           21 AITAKELYTMMTDKNISLIIMDARRMQDY-----------QDSCILHSLSVPEEAISPGVTASWIEAHLP-DDSKDTWKK   88 (157)
T ss_dssp             EECHHHHHHHHHSTTSCEEEEECSCHHHH-----------HHSCBTTCEECCGGGCCTTCCHHHHHHTSC-HHHHHHHHT
T ss_pred             ccCHHHHHHHHhcCCCCeEEEECCCHHHH-----------HhcCccCCcccCHHHcCCCCcHHHHHHHcC-HHHHHHHHh
Confidence            58999999988866  7899999999999           789999999999986642210     1122 222344443


Q ss_pred             cCCCCCCCEEEEcCChHH
Q 018869          318 EGISLEKPVVTACGTGVT  335 (349)
Q Consensus       318 ~~i~~~~~vivyC~~G~r  335 (349)
                      .  ...+.||+||.+|.+
T Consensus        89 ~--~~~~~VVvy~~~~~~  104 (157)
T 2gwf_A           89 R--GNVEYVVLLDWFSSA  104 (157)
T ss_dssp             T--TTSSEEEEECSSCCG
T ss_pred             c--CCCCEEEEEcCCCCc
Confidence            2  244569999998854

>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4

Probab=98.94  E-value=3e-10  Score=96.16  Aligned_cols=78  Identities=17%  Similarity=0.189  Sum_probs=54.8

Q ss_pred             cccCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCC-----CCCCHHHHHHHHH
Q 018869          244 LIWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ-----TLLPADELKKRFE  316 (349)
Q Consensus       244 ~~i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~-----~l~~~~el~~~~~  316 (349)
                      ..++.+++.+.+++.  +.+|||+|++.||           ..||||||+|||+..+.....     ..++ +..+++|.
T Consensus        15 ~~i~~~~l~~~l~~~~~~~~liDvR~~~ey-----------~~gHI~gainip~~~~~~~~~~~~l~~~lp-~~~~~~~~   82 (157)
T 1whb_A           15 GAITAKELYTMMTDKNISLIIMDARRMQDY-----------QDSCILHSLSVPEEAISPGVTASWIEAHLP-DDSKDTWK   82 (157)
T ss_dssp             SEECHHHHHHHHTCSSSCEEEEEESCHHHH-----------HHCCBTTCEEECSSSCCTTCCHHHHHHSCC-TTHHHHHH
T ss_pred             CccCHHHHHHHHhcCCCCeEEEECCCHHHH-----------HhccccCCcccCHHHccCCCcHHHHHHHCC-hHHHHHHH
Confidence            468999999988766  7899999999999           789999999999986532100     0111 11233444


Q ss_pred             HcCCCCCCCEEEEcCChHH
Q 018869          317 QEGISLEKPVVTACGTGVT  335 (349)
Q Consensus       317 ~~~i~~~~~vivyC~~G~r  335 (349)
                      ..+  ..+.||+||.+|.+
T Consensus        83 ~~~--~~~~VVvy~~~~~~   99 (157)
T 1whb_A           83 KRG--NVEYVVLLDWFSSA   99 (157)
T ss_dssp             GGG--TSSEEEEECSSCCG
T ss_pred             hcC--CCCEEEEECCCCCc
Confidence            322  34569999998854

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}

Probab=97.48  E-value=0.00018  Score=60.22  Aligned_cols=93  Identities=16%  Similarity=0.148  Sum_probs=53.3

Q ss_pred             cCHHHHHHHhhcCCceEEeccCCCcccccCCCCCC----CCCcc-ccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 018869          246 WTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK----GIRSG-HVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (349)
Q Consensus       246 i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~----~~~~G-HIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i  320 (349)
                      ++.+++....+.+-..|||+|++.|....   |..    ....+ +|+|.+|+|....      -.+.+.+.+.+.... 
T Consensus        30 ~~~~d~~~L~~~Gi~~IIdlR~~~E~~~~---p~~~~~~~~~~~~gi~~~~~iPv~~~------~~~~~~~~~~~~~l~-   99 (156)
T 2f46_A           30 LTKADAEQIAQLGIKTIICNRPDREEESQ---PDFAQIKQWLEQAGVTGFHHQPVTAR------DIQKHDVETFRQLIG-   99 (156)
T ss_dssp             CCGGGHHHHHHHTCCEEEECSCTTSSTTC---CCHHHHHHHHGGGTCCEEEECCCCTT------TCCHHHHHHHHHHHH-
T ss_pred             CCHHHHHHHHHCCCCEEEECCCCccccCC---CcHHHHHHHHHHCCCHhheECccCCC------CCCHHHHHHHHHHHH-
Confidence            34555555444344679999988774211   000    00123 4888899997542      123455554433211 


Q ss_pred             CCCCCEEEEcCChHHHHHHHHHH-HhCcC
Q 018869          321 SLEKPVVTACGTGVTACILALVL-FPVFF  348 (349)
Q Consensus       321 ~~~~~vivyC~~G~rA~~~~~~L-~~~g~  348 (349)
                      ..++||++||.+|.|+..++.++ ...|+
T Consensus       100 ~~~~pVlvHC~sG~Rs~~l~al~l~~~g~  128 (156)
T 2f46_A          100 QAEYPVLAYCRTGTRCSLLWGFRRAAEGM  128 (156)
T ss_dssp             TSCSSEEEECSSSHHHHHHHHHHHHHTTC
T ss_pred             hCCCCEEEECCCCCCHHHHHHHHHHHcCC
Confidence            24789999999999998654442 33453

>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}

Probab=96.69  E-value=0.0021  Score=53.54  Aligned_cols=94  Identities=10%  Similarity=0.030  Sum_probs=49.5

Q ss_pred             cHHHHHHhcCCCCcEEEEeccCCCCC-CCCC--hhhhhcC-CCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           79 SVDWLHANLREPDLKVLDASWYMPDE-QRNP--FQEYQVA-HIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        79 s~~~L~~~l~~~~~~iIDvR~~~~~~-~~~~--~~~y~~G-HIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      +++++..+.+.+-..|||+|...... +.+.  ..+|..+ +|.|.+++|+...          -++.+.+.++...+. 
T Consensus        31 ~~~d~~~L~~~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~----------~~~~~~~~~~~~~l~-   99 (156)
T 2f46_A           31 TKADAEQIAQLGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTAR----------DIQKHDVETFRQLIG-   99 (156)
T ss_dssp             CGGGHHHHHHHTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTT----------TCCHHHHHHHHHHHH-
T ss_pred             CHHHHHHHHHCCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCC----------CCCHHHHHHHHHHHH-
Confidence            34444443332235799999211000 0000  0023344 5999999998632          133455555444432 


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHH-HHcCCC
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMF-RVFGHD  184 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L-~~~G~~  184 (349)
                      +.+.+|+|||..|. +++.++.++ ...|++
T Consensus       100 ~~~~pVlvHC~sG~-Rs~~l~al~l~~~g~~  129 (156)
T 2f46_A          100 QAEYPVLAYCRTGT-RCSLLWGFRRAAEGMP  129 (156)
T ss_dssp             TSCSSEEEECSSSH-HHHHHHHHHHHHTTCC
T ss_pred             hCCCCEEEECCCCC-CHHHHHHHHHHHcCCC
Confidence            24689999999887 666443332 444653

>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A

Probab=87.68  E-value=1.2  Score=35.63  Aligned_cols=74  Identities=15%  Similarity=0.214  Sum_probs=39.2

Q ss_pred             HHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCC--cccCcccccCCCCCCCCHHHHHHHHHHc--CCCCC
Q 018869          248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGS--KCIPFPQMLDASQTLLPADELKKRFEQE--GISLE  323 (349)
Q Consensus       248 ~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA--~~ip~~~l~~~~~~l~~~~el~~~~~~~--~i~~~  323 (349)
                      .+++....+.+=..|||.|...+..           ....+|-  +++||.+..     ..+.+.+.+.+.-.  -+..+
T Consensus        25 ~~~~~~L~~~gi~~Vi~l~~~~~~~-----------~~~~~~~~~~~~~~~d~~-----~~~~~~~~~~~~~i~~~~~~~   88 (150)
T 4erc_A           25 PAHYQFLLDLGVRHLVSLTERGPPH-----------SDSCPGLTLHRLRIPDFC-----PPAPDQIDRFVQIVDEANARG   88 (150)
T ss_dssp             HHHHHHHHHTTEEEEEECSSSCCTT-----------GGGCTTSEEEECCCCTTS-----CCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHCCCCEEEEcCCCCCCc-----------ccccCCceEEEEecCCCC-----CCCHHHHHHHHHHHHHHHHCC
Confidence            4455444333345799999976641           1122232  345554432     22344444333310  12356


Q ss_pred             CCEEEEcCChH-HHH
Q 018869          324 KPVVTACGTGV-TAC  337 (349)
Q Consensus       324 ~~vivyC~~G~-rA~  337 (349)
                      .+|+|+|..|. |+.
T Consensus        89 ~~vlVHC~~G~~Rsg  103 (150)
T 4erc_A           89 EAVGVHCALGFGRTG  103 (150)
T ss_dssp             CEEEEECSSSSHHHH
T ss_pred             CCEEEECCCCCCHHH
Confidence            89999999996 776

>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}

Probab=86.07  E-value=1.9  Score=34.26  Aligned_cols=77  Identities=13%  Similarity=0.157  Sum_probs=39.3

Q ss_pred             HHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH--cCCCCCCC
Q 018869          248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ--EGISLEKP  325 (349)
Q Consensus       248 ~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~--~~i~~~~~  325 (349)
                      .+++....+.+=..|||.|...|+......     ..    +-.++||.+...     .+.+.+.+.+.-  ..+..+.+
T Consensus        26 ~~~~~~l~~~gi~~Vv~l~~~~e~~~~~~~-----~~----~~~~~~~~d~~~-----p~~~~~~~~~~~i~~~~~~~~~   91 (151)
T 2img_A           26 PAHYQFLLDLGVRHLVSLTERGPPHSDSCP-----GL----TLHRLRIPDFCP-----PAPDQIDRFVQIVDEANARGEA   91 (151)
T ss_dssp             HHHHHHHHHTTEEEEEECSSSCCTTGGGCT-----TS----EEEECCCCTTCC-----CCHHHHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHHHHCCCCEEEECCCCCCCCHHHHh-----hC----CeEEEeCCCCCC-----CCHHHHHHHHHHHHHHHhCCCc
Confidence            344443333334579999998765221100     11    134566644322     233444433331  01234689


Q ss_pred             EEEEcCChH-HHHH
Q 018869          326 VVTACGTGV-TACI  338 (349)
Q Consensus       326 vivyC~~G~-rA~~  338 (349)
                      |+|+|..|. |+..
T Consensus        92 vlVHC~aG~~Rsg~  105 (151)
T 2img_A           92 VGVHCALGFGRTGT  105 (151)
T ss_dssp             EEEECSSSSSHHHH
T ss_pred             EEEECCCCCChHHH
Confidence            999999985 6643

>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A

Probab=85.40  E-value=1.2  Score=35.93  Aligned_cols=85  Identities=8%  Similarity=0.065  Sum_probs=42.6

Q ss_pred             CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEcCChH-HH
Q 018869          258 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGV-TA  336 (349)
Q Consensus       258 ~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~vivyC~~G~-rA  336 (349)
                      +=..|||.|+..+.....   ......| | .-+++|+.+...+ ..-.+.+.+.+.+....-..+.+|+++|..|. |+
T Consensus        33 gi~~Vi~l~~~~e~~~~~---~~~~~~g-i-~~~~ipi~d~~~~-~~~~~~~~~~~~~~~i~~~~~~~vlvHC~aG~~RT  106 (151)
T 1xri_A           33 GLRSIIYLCPEPYPESNL---QFLKSNG-I-RLFQFGIEGNKEP-FVNIPDHKIRMALKVLLDEKNHPVLIHCKRGKHRT  106 (151)
T ss_dssp             TCSEEEECCSSCCCHHHH---HHHHHHT-C-EEEECCCCCCCGG-GCCCCHHHHHHHHHHHHCGGGCSEEEECSSSSSHH
T ss_pred             CCCEEEECCCCCcChhHH---HHHHhcC-C-eEEecccccccCc-cccCCHHHHHHHHHHHHcCCCCCEEEECCCCCCHH
Confidence            345799999877642100   0000001 0 0134554332110 11134566666665421124689999999995 76


Q ss_pred             H-HHHHHHHhCcC
Q 018869          337 C-ILALVLFPVFF  348 (349)
Q Consensus       337 ~-~~~~~L~~~g~  348 (349)
                      . +++.+|...|+
T Consensus       107 g~~~a~~l~~~g~  119 (151)
T 1xri_A          107 GCLVGCLRKLQKW  119 (151)
T ss_dssp             HHHHHHHHHHTTB
T ss_pred             HHHHHHHHHHhCC
Confidence            5 44555555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	349
d1okga1	156	c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransf	3e-36
d1rhsa1	149	c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [Ta	7e-35
d1urha1	147	c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransf	2e-33
d1uara1	143	c.46.1.2 (A:2-144) Sulfurtransferase {Thermus ther	2e-24
d1rhsa2	144	c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [	2e-20
d1rhsa2	144	c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [	4e-08
d1urha2	120	c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtran	2e-17
d1urha2	120	c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtran	8e-07
d1hzma_	154	c.46.1.1 (A:) Erk2 binding domain of Mapk phosphat	3e-16
d1e0ca1	135	c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter	3e-14
d1okga2	139	c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtran	9e-14
d1okga2	139	c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtran	1e-07
d1uara2	141	c.46.1.2 (A:145-285) Sulfurtransferase {Thermus th	1e-13
d1uara2	141	c.46.1.2 (A:145-285) Sulfurtransferase {Thermus th	2e-07
d1e0ca2	136	c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacte	2e-12
d1e0ca2	136	c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacte	6e-11
d2gwfa1	135	c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal h	6e-10
d1gmxa_	108	c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia	3e-09
d1tq1a_	119	c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senesc	6e-09
d1yt8a3	157	c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase	1e-08
d1yt8a2	101	c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase P	4e-08
d1t3ka_	132	c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {	1e-07
d1yt8a1	136	c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase	3e-07
d1c25a_	161	c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId:	0.003

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 156

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score =  126 bits (318), Expect = 3e-36
 Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR- 131
           P +  +    +  +L   + +++D  + +  +  +   +Y   H+  A+  DVD    + 
Sbjct: 5   PGKVFLDPSEVADHLA--EYRIVDCRYSLKIK-DHGSIQYAKEHVKSAIRADVDTNLSKL 61

Query: 132 --TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWV 188
             T+   H LP    F     A G+  +  ++ YD + G     R+WWM    G D  +V
Sbjct: 62  VPTSTARHPLPPCAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGAD-AYV 120

Query: 189 LDGGLPRWRASGYDVES 205
           ++GG    +A+G ++ES
Sbjct: 121 INGGFQACKAAGLEMES 137

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 149

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  122 bits (307), Expect = 7e-35
 Identities = 66/139 (47%), Positives = 81/139 (58%), Gaps = 7/139 (5%)

Query: 76  PVVSVDWLHANLRE----PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADR 131
            +VS  WL  ++R     P L+VLDASWY P   R   +EY   H+PGA FFD++   D+
Sbjct: 8   ALVSTKWLAESVRAGKVGPGLRVLDASWYSPG-TREARKEYLERHVPGASFFDIEECRDK 66

Query: 132 TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVL 189
            +    MLPSE  FA  V +LG+ N   +VVYDG   G F A RVWWMFRVFGH  V VL
Sbjct: 67  ASPYEVMLPSEAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVL 126

Query: 190 DGGLPRWRASGYDVESSAS 208
           +GG   W   G+ V S  S
Sbjct: 127 NGGFRNWLKEGHPVTSEPS 145

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 147

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score =  119 bits (298), Expect = 2e-33
 Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 1/134 (0%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPD-EQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
             V  DWL  ++ +P+++++DA    P  E RN  QEY   HIPGA+FFD++ ++D T+ 
Sbjct: 3   WFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSP 62

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           LPHMLP  E FA A+  LG+     L+VYD   +FSA R WWM R FG ++V +L GGL 
Sbjct: 63  LPHMLPRPETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLA 122

Query: 195 RWRASGYDVESSAS 208
            W+     +E  A 
Sbjct: 123 GWQRDDLLLEEGAV 136

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 143

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 95.0 bits (235), Expect = 2e-24
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 10/133 (7%)

Query: 75  EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           E +VS DW+  +L +P ++VL+               Y   HIPGA   D     D    
Sbjct: 6   EVLVSTDWVQEHLEDPKVRVLEVDE--------DILLYDTGHIPGAQKIDWQR--DFWDP 55

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           +     SEE FA  +  LG+ N   +V+Y  K  + AA  +W F+  GH  V +++GG  
Sbjct: 56  VVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQ 115

Query: 195 RWRASGYDVESSA 207
           +W   G  + +  
Sbjct: 116 KWVEEGRPLTTEV 128

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 144

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 84.5 bits (208), Expect = 2e-20
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 1/110 (0%)

Query: 235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCI 293
            F+      L+ T EQV  N+E   +QLVD+R++ R+ G  PEP   G+ SGH+ GS  +
Sbjct: 2   IFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNM 61

Query: 294 PFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
           PF   L         +EL+  FE + + L KP++  C  GVTAC +AL  
Sbjct: 62  PFMNFLTEDGFEKSPEELRAMFEAKKVDLTKPLIATCRKGVTACHIALAA 111

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]} Length = 144

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 49.9 bits (118), Expect = 4e-08
 Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 8/131 (6%)

Query: 74  KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQE---YQVAHIPGALFFDVDGVAD 130
           +  + + + +  NL     +++D+          P  +       HI G++         
Sbjct: 9   RSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLT 68

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 190
                     S E   A   A  ++    L+    KG  +A  +     + G   V + D
Sbjct: 69  E----DGFEKSPEELRAMFEAKKVDLTKPLIATCRKG-VTACHIALAAYLCGKPDVAIYD 123

Query: 191 GGLPRWRASGY 201
           G    W     
Sbjct: 124 GSWFEWFHRAP 134

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 120

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 75.4 bits (184), Expect = 2e-17
 Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 1/102 (0%)

Query: 242 PHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA 301
           P  +  +  V     E T Q++DAR  ARF+ +  EPR G+R GH+PG+  +P+ ++   
Sbjct: 2   PEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTEL-VR 60

Query: 302 SQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
              L   DEL   F   G+S +KP++ +CG+GVTA ++ L L
Sbjct: 61  EGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLAL 102

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]} Length = 120

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

 Score = 45.4 bits (106), Expect = 8e-07
 Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 10/126 (7%)

Query: 74  KEPVVSVDWLHANLREPDLKVLDA---SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD 130
            E VV V  +     E   +++DA   + +   E   P    +  HIPGAL         
Sbjct: 2   PEAVVKVTDVLLASHENTAQIIDARPAARFN-AEVDEPRPGLRRGHIPGALNVP-----W 55

Query: 131 RTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLD 190
                   L + +   A     G+     ++V  G G+  AA V           V + D
Sbjct: 56  TELVREGELKTTDELDAIFFGRGVSYDKPIIVSCGSGVT-AAVVLLALATLDVPNVKLYD 114

Query: 191 GGLPRW 196
           G    W
Sbjct: 115 GAWSEW 120

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 154

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.0 bits (178), Expect = 3e-16
 Identities = 23/144 (15%), Positives = 49/144 (34%), Gaps = 27/144 (18%)

Query: 71  VSPKEPVVSVDWLHANLREPDLKV--LDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV 128
            S      +V WL+  L   + ++  +D           P + Y+ +HI  A+   + G+
Sbjct: 11  ASEMAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGI 61

Query: 129 ADR-----TTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG------IFSAARVWWM 177
             R        +  +    E              D +V+YD             + +  +
Sbjct: 62  MLRRLQKGNLPVRALFTRGEDRD---RFTRRCGTDTVVLYDESSSDWNENTGGESLLGLL 118

Query: 178 FRVFGHD--RVWVLDGGLPRWRAS 199
            +    +  R + L+GG  +++A 
Sbjct: 119 LKKLKDEGCRAFYLEGGFSKFQAE 142

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 66.7 bits (161), Expect = 3e-14
 Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 14/144 (9%)

Query: 64  ADYSTLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFF 123
            D+++L +     V+    L A L  P+L ++D +             Y   HIPGA F 
Sbjct: 2   DDFASLPL-----VIEPADLQARLSAPELILVDLTSA---------ARYAEGHIPGARFV 47

Query: 124 DVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGH 183
           D           P + P  E   +    LG   +   VVYD +G   A R  W+  V G 
Sbjct: 48  DPKRTQLGQPPAPGLQPPREQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ 107

Query: 184 DRVWVLDGGLPRWRASGYDVESSA 207
            R   L+GGL  W A    +    
Sbjct: 108 QRYHYLNGGLTAWLAEDRPLSREL 131

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score = 65.6 bits (159), Expect = 9e-14
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 261 QLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--------SQTLLPADELK 312
            + DARS  RF             GH+ G++ +P+   L          S+  +  + + 
Sbjct: 14  IITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMT 73

Query: 313 KRFEQEGISLEKPVVTACGTGVTACILALV 342
                   +     V +CG+GVTACI   +
Sbjct: 74  VVQGAGDAADLSSFVFSCGSGVTACINIAL 103

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

 Score = 47.9 bits (113), Expect = 1e-07
 Identities = 19/130 (14%), Positives = 30/130 (23%), Gaps = 10/130 (7%)

Query: 90  PDLKVLDASWYMPDE----QRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAF 145
           P   + DA     D      R    +    HI GA             +   +   EE  
Sbjct: 11  PQAIITDARS--ADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIR 68

Query: 146 ---AAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGY 201
                 V   G        V+      +A     +    G    ++  G    +      
Sbjct: 69  HNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRP 128

Query: 202 DVESSASGDA 211
            +  S   D 
Sbjct: 129 PIMRSIIDDY 138

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 141

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 65.3 bits (158), Expect = 1e-13
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 248 LEQVKRNIEEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDAS 302
           + +    ++EG   LVD RS   + G+            +R+GH+PG+K IP+ + ++  
Sbjct: 9   VLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD 68

Query: 303 QTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
            T   A+EL+  +E  GI+ +K +V  C     +     VL
Sbjct: 69  GTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVL 109

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]} Length = 141

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

 Score = 47.5 bits (112), Expect = 2e-07
 Identities = 24/131 (18%), Positives = 39/131 (29%), Gaps = 18/131 (13%)

Query: 85  ANLREPDLKVLDA----------SWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
             ++E    ++D           +      Q    +     HIPGA          +  N
Sbjct: 14  IKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAG---HIPGAKNIPWA----KAVN 66

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
                 S E   A    LG+     +VVY      S+   + +  + G+  V   DG   
Sbjct: 67  PDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWT 126

Query: 195 RW-RASGYDVE 204
            W    G  + 
Sbjct: 127 EWGNLVGVPIA 137

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 61.5 bits (148), Expect = 2e-12
 Identities = 32/139 (23%), Positives = 44/139 (31%), Gaps = 10/139 (7%)

Query: 68  TLSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVA-HIPGALFFDVD 126
            LS+   EP  S D+L   L   DL + DA    P E R          HIPGA+ F+  
Sbjct: 5   ALSLHD-EPTASRDYLLGRLGAADLAIWDARS--PQEYRGEKVLAAKGGHIPGAVNFE-- 59

Query: 127 GVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRV 186
                    P          A          D  +V   +    +   + + +  G+ RV
Sbjct: 60  ---WTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIAKALGYPRV 116

Query: 187 WVLDGGLPRW-RASGYDVE 204
               G    W       VE
Sbjct: 117 KGYAGSWGEWGNHPDTPVE 135

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

 Score = 57.6 bits (138), Expect = 6e-11
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 5/112 (4%)

Query: 232 GPTTFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSK 291
           GP             + + +   +      + DARS   +     E     + GH+PG+ 
Sbjct: 2   GPVAL--SLHDEPTASRDYLLGRLGAADLAIWDARSPQEY---RGEKVLAAKGGHIPGAV 56

Query: 292 CIPFPQMLDASQTLLPADELKKRFEQEGISLEKPVVTACGTGVTACILALVL 343
              +   +D S+ L    ++  R E+ GI+ +K +VT C T   + +  L+ 
Sbjct: 57  NFEWTAAMDPSRALRIRTDIAGRLEELGITPDKEIVTHCQTHHRSGLTYLIA 108

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]} Length = 135

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 6e-10
 Identities = 15/136 (11%), Positives = 41/136 (30%), Gaps = 25/136 (18%)

Query: 78  VSVDWLHANLREPDLKVL--DASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
           ++   L+  + + ++ ++  DA      +          + I  +L    + ++   T  
Sbjct: 3   ITAKELYTMMTDKNISLIIMDARRMQDYQD---------SCILHSLSVPEEAISPGVT-- 51

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVF------------GH 183
              + +     +  +     N + +V+ D        ++    R                
Sbjct: 52  ASWIEAHLPDDSKDTWKKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLR 111

Query: 184 DRVWVLDGGLPRWRAS 199
           +   VL+GG   W   
Sbjct: 112 NEPLVLEGGYENWLLC 127

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]} Length = 108

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

 Score = 51.7 bits (123), Expect = 3e-09
 Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 30/127 (23%)

Query: 78  VSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPH 137
           ++V   H  L+E +  ++D         R+P Q + + H   A     D +     +   
Sbjct: 7   INVADAHQKLQEKEAVLVDI--------RDP-QSFAMGHAVQAFHLTNDTLGAFMRDNDF 57

Query: 138 MLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWR 197
             P                     V    G  S           G+D V+ +DGG   W+
Sbjct: 58  DTPVM-------------------VMCYHGNSSK-GAAQYLLQQGYDVVYSIDGGFEAWQ 97

Query: 198 ASGYDVE 204
              +  E
Sbjct: 98  R-QFPAE 103

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 119

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.4 bits (122), Expect = 6e-09
 Identities = 19/130 (14%), Positives = 35/130 (26%), Gaps = 18/130 (13%)

Query: 76  PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
             VSV   H  L     + LD         R P +E+   H  GA+            + 
Sbjct: 8   SSVSVTVAHD-LLLAGHRYLDV--------RTP-EEFSQGHACGAINVPYMNRGASGMSK 57

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
                 +              +   ++   +    + +        G   V  + GG   
Sbjct: 58  NTDFLEQ--------VSSHFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSA 109

Query: 196 WRASGYDVES 205
           W  +G   ++
Sbjct: 110 WAKNGLPTKA 119

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 157

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 51.1 bits (121), Expect = 1e-08
 Identities = 32/189 (16%), Positives = 53/189 (28%), Gaps = 37/189 (19%)

Query: 73  PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRT 132
           P+   +    L   L EP  +VLD +                  +   L   ++ +    
Sbjct: 2   PRADTIDPTTLADWLGEPGTRVLDFTA--SANYAKRHIPGAAWVLRSQLKQALERLGTAE 59

Query: 133 TNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGG 192
                                        V        A       +      V++LDGG
Sbjct: 60  R---------------------------YVLTCGSSLLARFAVAEVQALSGKPVFLLDGG 92

Query: 193 LPRWRASGYDVESSASGDAILKASAASEAIEKVYQGQVVGPTTFQTKFQPHLIWTLEQVK 252
              W A+G   E   S    L AS   +   + Y+    G    +   Q +L W    V+
Sbjct: 93  TSAWVAAGLPTEDGES----LLASPRIDRYRRPYE----GTDNPREAMQGYLDWEFGLVE 144

Query: 253 RNIEEGTYQ 261
           +   +GT+ 
Sbjct: 145 QLGRDGTHG 153

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 101

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 48.5 bits (114), Expect = 4e-08
 Identities = 22/125 (17%), Positives = 34/125 (27%), Gaps = 28/125 (22%)

Query: 77  VVSVDWLHANLRE-PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNL 135
           V +   + A L    +L +LD               +  AH   A    +  +       
Sbjct: 3   VRTFHDIRAALLARRELALLDVREE---------DPFAQAHPLFAANLPLSRLELEIHAR 53

Query: 136 PHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPR 195
                                +D  +     G   A          G+  V +LDGGL  
Sbjct: 54  VPR------------------RDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSG 95

Query: 196 WRASG 200
           WR +G
Sbjct: 96  WRNAG 100

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 132

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 48.2 bits (113), Expect = 1e-07
 Identities = 17/139 (12%), Positives = 36/139 (25%), Gaps = 16/139 (11%)

Query: 69  LSVSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV 128
           ++++     ++   L    R P++ ++D      +   +       A             
Sbjct: 1   MAMARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQ 60

Query: 129 ADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWV 188
             +  +      +         A  L N                 +       G   + +
Sbjct: 61  NVKDKDTLVFHSALSQVRGPTCARRLVN----------------YLDEKKEDTGIKNIMI 104

Query: 189 LDGGLPRWRASGYDVESSA 207
           L+ G   W ASG  V   A
Sbjct: 105 LERGFNGWEASGKPVCRCA 123

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]} Length = 136

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 46.8 bits (110), Expect = 3e-07
 Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 27/134 (20%)

Query: 76  PVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN 134
           P ++ + + A L    +  +LDA        R    EYQ   IPG +      +  R   
Sbjct: 24  PSLAAEEVQALLDARAEAVILDA--------RRF-DEYQTMSIPGGISVPGAELVLRVAE 74

Query: 135 LPHMLPSEEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLP 194
           L     +                  ++V       S      +      + V  L  G  
Sbjct: 75  LAPDPRTR-----------------VIVNCAGRTRSIIGTQSLLNAGIPNPVAALRNGTI 117

Query: 195 RWRASGYDVESSAS 208
            W  +G  +E   +
Sbjct: 118 GWTLAGQQLEHGQT 131

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 0.003
 Identities = 25/165 (15%), Positives = 46/165 (27%), Gaps = 39/165 (23%)

Query: 50  QSPCVMSSLAAGRRADYSTLSVSPKEPVVSVDWLHANLREP--DLKVLDASWYMPDEQRN 107
               +  ++A G+  D   +S     P +    L+        +  ++D         R 
Sbjct: 7   SKGYLFHTVA-GKHQDLKYIS-----PEIMASVLNGKFANLIKEFVIIDC--------RY 52

Query: 108 PFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLENKDGLVVYDGKG 167
           P  EY+  HI GA+            NL      E+             +  +V +    
Sbjct: 53  P-YEYEGGHIKGAV------------NLHMEEEVEDFLLKKPIVPTDGKRVIVVFHCEFS 99

Query: 168 IFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRASGYD 202
                R+    R             +  ++VL GG   +      
Sbjct: 100 SERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQS 144

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	349
d1urha1	147	3-mercaptopyruvate sulfurtransferase {Escherichia	100.0
d1rhsa1	149	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.97
d1uara1	143	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.97
d1okga1	156	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.96
d1e0ca1	135	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.95
d1e0ca2	136	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.93
d1rhsa2	144	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.93
d1e0ca2	136	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.91
d1rhsa2	144	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.9
d1urha2	120	3-mercaptopyruvate sulfurtransferase {Escherichia	99.89
d1uara2	141	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.88
d1yt8a1	136	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.87
d1uara2	141	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.87
d1urha2	120	3-mercaptopyruvate sulfurtransferase {Escherichia	99.86
d1yt8a3	157	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.85
d1tq1a_	119	Thiosulfate sulfurtransferase/Senescence-associate	99.85
d1yt8a2	101	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.84
d1gmxa_	108	Sulfurtransferase GlpE {Escherichia coli [TaxId: 5	99.84
d1qxna_	137	Polysulfide-sulfur transferase (sulfide dehydrogen	99.82
d1okga2	139	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.82
d1t3ka_	132	Dual specificity phosphatase Cdc25 {Thale cress (A	99.82
d1okga2	139	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.8
d1yt8a4	130	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.78
d1uara1	143	Sulfurtransferase {Thermus thermophilus [TaxId: 27	99.72
d1urha1	147	3-mercaptopyruvate sulfurtransferase {Escherichia	99.69
d1hzma_	154	Erk2 binding domain of Mapk phosphatase mkp-3 {Hum	99.66
d2gwfa1	135	Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum	99.65
d1c25a_	161	CDC25a {Human (Homo sapiens) [TaxId: 9606]}	99.65
d1ymka1	174	CDC25b {Human (Homo sapiens) [TaxId: 9606]}	99.6
d1gmxa_	108	Sulfurtransferase GlpE {Escherichia coli [TaxId: 5	99.6
d1yt8a4	130	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.56
d1rhsa1	149	Rhodanese {Cow (Bos taurus) [TaxId: 9913]}	99.55
d1yt8a1	136	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.54
d1tq1a_	119	Thiosulfate sulfurtransferase/Senescence-associate	99.52
d1yt8a2	101	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.51
d1e0ca1	135	Sulfurtransferase {Azotobacter vinelandii [TaxId:	99.49
d1okga1	156	3-mercaptopyruvate sulfurtransferase {Leishmania m	99.49
d1yt8a3	157	Thiosulfate sulfurtransferase PA2603 {Pseudomonas	99.43
d1qxna_	137	Polysulfide-sulfur transferase (sulfide dehydrogen	99.4
d1t3ka_	132	Dual specificity phosphatase Cdc25 {Thale cress (A	99.17
d1c25a_	161	CDC25a {Human (Homo sapiens) [TaxId: 9606]}	98.98
d2gwfa1	135	Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Hum	98.96
d1hzma_	154	Erk2 binding domain of Mapk phosphatase mkp-3 {Hum	98.93
d1ymka1	174	CDC25b {Human (Homo sapiens) [TaxId: 9606]}	98.77
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	89.51
d1xria_	151	Putative phosphatase At1g05000 {Thale cress (Arabi	86.22

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.4e-33  Score=236.74  Aligned_cols=134  Identities=43%  Similarity=0.859  Sum_probs=122.1

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCC-CCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQ-RNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~-~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ..+||++||+++|++++++|||||+.++... .+..++|..||||||+|+++..+.+...+.++++|+.++|+++++.+|
T Consensus         2 ~~lVs~~wL~~~L~~~~v~iiD~r~~~~~~~~~~~~~~y~~gHIPGAi~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~G   81 (147)
T d1urha1           2 TWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   81 (147)
T ss_dssp             CCEECHHHHHTTTTCTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             CccCcHHHHHHHhCCCCeEEEEeeCCCCCccCccHHHHHHhCCccccEEeehhhhccccccccccCCCHHHHHHHHHHhC
Confidence            4689999999999999999999998765432 334568999999999999999888888888999999999999999999


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      |+++++||+||+.++..|+|+||+|+.+||+||++||||+.+|+++|+|++++.+
T Consensus        82 i~~~~~vVvY~~~~~~~A~r~~~~L~~~G~~~V~vLdGG~~~W~~~g~pv~~~~~  136 (147)
T d1urha1          82 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV  136 (147)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred             cCCCCeEEEEeCCCcccchhHHHHHHhhcccceEEeCChHHHHHHcCCCccCCCC
Confidence            9999999999988777899999999999999999999999999999999999874

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=2.2e-31  Score=223.60  Aligned_cols=135  Identities=49%  Similarity=0.903  Sum_probs=120.3

Q ss_pred             CCCCcccHHHHHHhcC----CCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHH
Q 018869           73 PKEPVVSVDWLHANLR----EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (349)
Q Consensus        73 ~~~~lIs~~~L~~~l~----~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~  148 (349)
                      +..++||++||+++|+    +++++|||||+++++. +++.++|..||||||+|++++.+.......++++|+.++|++.
T Consensus         5 ~~~~lVs~~wL~~~L~~~~~~~~~~IiD~r~~~~~~-~~~~~~y~~gHIPGAv~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (149)
T d1rhsa1           5 LYRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGT-REARKEYLERHVPGASFFDIEECRDKASPYEVMLPSEAGFADY   83 (149)
T ss_dssp             CCCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTS-CCHHHHHHHSBCTTCEECCTTTSSCTTSSSSSCCCCHHHHHHH
T ss_pred             cCCCccCHHHHHHHHhccCCCCCEEEEEecCcCCCC-cchHHHHHHhcccCceeccHHhhcccccchhhhhhhhHHHHHH
Confidence            3568999999999986    3479999999887663 3467899999999999999998887777778899999999999


Q ss_pred             HHHcCCCCCCcEEEECCC--CcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          149 VSALGLENKDGLVVYDGK--GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       149 ~~~~gi~~~~~VVvy~~~--g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      ++.+||+++++|||||+.  ++..|+|+||+|+++||+||++||||+.+|+++|+|++++++
T Consensus        84 l~~~Gi~~~~~vVvy~~~~~~~~~a~r~~w~L~~~G~~~V~vLdGG~~~W~~~G~pv~~~~~  145 (149)
T d1rhsa1          84 VGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEPS  145 (149)
T ss_dssp             HHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSCC
T ss_pred             HhhhhccCCceeEEeeccCCcchhhhHHHHHHHHcCCCceEEeCCcHHHHHHCcCcccCCCC
Confidence            999999999999999864  456799999999999999999999999999999999998864

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=1.6e-31  Score=222.99  Aligned_cols=128  Identities=30%  Similarity=0.557  Sum_probs=114.5

Q ss_pred             CCCCCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 018869           71 VSPKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (349)
Q Consensus        71 ~~~~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~  150 (349)
                      ++++..+||++||++++++++++|||||        .+.++|..||||||+|+|+....  ..+.++++++.++|+++++
T Consensus         2 ~~~p~~lVs~~~l~~~l~~~~v~iiDvr--------~~~~~y~~gHIPgAi~~~~~~~~--~~~~~~~l~~~~~l~~~~~   71 (143)
T d1uara1           2 YAHPEVLVSTDWVQEHLEDPKVRVLEVD--------EDILLYDTGHIPGAQKIDWQRDF--WDPVVRDFISEEEFAKLME   71 (143)
T ss_dssp             CSCGGGEECHHHHHTTTTCTTEEEEEEC--------SSTTHHHHCBCTTCEEECHHHHH--BCSSSSSBCCHHHHHHHHH
T ss_pred             CCCCCccCcHHHHHHHhCCCCeEEEECC--------CCHHHHhcCCCCCcccccccccc--cccccccchhhHHHHHHhh
Confidence            3567789999999999998899999999        34678999999999999986532  2345678999999999999


Q ss_pred             HcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      .+||+++++||+||+.++..|+|++|+|+.+||++|++||||+.+|+.+|+|++++.+
T Consensus        72 ~~Gi~~~~~iVvy~~~~~~~a~~~~~~l~~~G~~~V~vldGG~~~W~~~g~p~~~~~~  129 (143)
T d1uara1          72 RLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVP  129 (143)
T ss_dssp             HTTCCTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCC
T ss_pred             hhccCCCceEEEecCCCcccchhHHHHHHHhCCceEEEEcCcHHHHHHCCCCccCCCC
Confidence            9999999999999987777899999999999999999999999999999999999864

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.96  E-value=8.6e-30  Score=214.48  Aligned_cols=130  Identities=23%  Similarity=0.471  Sum_probs=112.3

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccc-ccc--CCCCCCCCCCHHHHHHHHHH
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGV-ADR--TTNLPHMLPSEEAFAAAVSA  151 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l-~~~--~~~~~~~lp~~~~~~~~~~~  151 (349)
                      ..+||++||.++++  +++|||||+++.+... ..++|..||||||++++++.. ...  ...+++++|+.++|++.++.
T Consensus         7 ~~lvs~~~L~~~l~--d~~iiD~r~~l~~~~~-g~~~Y~~gHIPGA~~~d~~~~l~~~~~~~~~~~~lP~~~~~~~~l~~   83 (156)
T d1okga1           7 KVFLDPSEVADHLA--EYRIVDCRYSLKIKDH-GSIQYAKEHVKSAIRADVDTNLSKLVPTSTARHPLPPCAEFIDWCMA   83 (156)
T ss_dssp             CCEECHHHHTTCGG--GSEEEECCCCSSSTTT-TTTHHHHCEETTCEECCTTTTSCCCCTTCCCSSCCCCHHHHHHHHHH
T ss_pred             CcEeCHHHHHHhcC--CCEEEEeeccCCCCcc-hHHHHHHcCCCCCeEcCHHHhcccccCCCCCccccCCHHHHHHHHHh
Confidence            56899999999886  5899999988776432 467999999999999998753 332  34467899999999999999


Q ss_pred             cCCCCCCcEEEECCC-CcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          152 LGLENKDGLVVYDGK-GIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~-g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      +||+++++||+||+. |.+.|+|+||+|+++|+ ||++||||+.+|+++|+|++++.+
T Consensus        84 lGI~~~~~VVvYd~~~g~~~A~R~~w~L~~~G~-~v~iLdGG~~aW~~~G~pv~t~~p  140 (156)
T d1okga1          84 NGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESGEP  140 (156)
T ss_dssp             TTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECSCC
T ss_pred             ccccCCceEEEEeCCCCchHHHHHHHHHHHcCC-eeEEeCCCHHHHHHCCCCCCCCCC
Confidence            999999999999865 44679999999999998 699999999999999999999864

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.95  E-value=2.7e-27  Score=194.43  Aligned_cols=127  Identities=29%  Similarity=0.463  Sum_probs=115.2

Q ss_pred             CCCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        73 ~~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      +.+.+||++||++++++++++|||||         +.++|..||||||+|+|+..+...........+..+.++..+...
T Consensus         6 ~~p~lIs~~el~~~l~~~~~viiDvR---------~~~ey~~gHIpgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (135)
T d1e0ca1           6 SLPLVIEPADLQARLSAPELILVDLT---------SAARYAEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGEL   76 (135)
T ss_dssp             TSCSEECHHHHHTTTTCTTEEEEECS---------CHHHHHHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHH
T ss_pred             CCCcEeeHHHHHHHhcCCCeEEEECC---------CHHHHhcccCccccccchhhhhhcccccchhhcchhhhhhhhccc
Confidence            35578999999999998899999999         789999999999999999887666555566777888899999999


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      ++..+..+|+||+.++..+++++|.|+.+||+||++|+||+.+|+++|+|++++.+
T Consensus        77 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~G~~~V~~l~GG~~~W~~~g~p~~~~~p  132 (135)
T d1e0ca1          77 GHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP  132 (135)
T ss_dssp             TCCTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred             cccccccccccccccCccchhhHHHHHhccCCCEEEecChHHHHHHCCCCCCCCCC
Confidence            99999999999988887899999999999999999999999999999999999865

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.93  E-value=1.1e-26  Score=191.78  Aligned_cols=118  Identities=27%  Similarity=0.400  Sum_probs=103.8

Q ss_pred             CCCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhh--------cCCCCCceecCcccccccCCCCCCCCCCHHH
Q 018869           73 PKEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ--------VAHIPGALFFDVDGVADRTTNLPHMLPSEEA  144 (349)
Q Consensus        73 ~~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~--------~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~  144 (349)
                      +..+++|.+||++++++++++|||+|         +..+|.        .||||||+|+|+..+.+..    +.+.+.++
T Consensus         9 ~~~~~~s~d~l~~~l~~~~~~liD~R---------~~~ey~G~~~~~~~~GhIPGAinip~~~~~~~~----~~~~~~~~   75 (136)
T d1e0ca2           9 HDEPTASRDYLLGRLGAADLAIWDAR---------SPQEYRGEKVLAAKGGHIPGAVNFEWTAAMDPS----RALRIRTD   75 (136)
T ss_dssp             CSTTBCCHHHHHHHTTCTTEEEEECS---------CHHHHTTSSCCSSSCSBCTTCEECCGGGGEEGG----GTTEECTT
T ss_pred             CCCceEcHHHHHHhhCCCCeEEEECc---------ChHHhcccccccccCCcchhHhhhhhhhhhccc----cccchhHH
Confidence            35789999999999999899999999         778885        7999999999998876542    34556678


Q ss_pred             HHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh-CCCCcc
Q 018869          145 FAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVE  204 (349)
Q Consensus       145 ~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~-~G~pv~  204 (349)
                      +++.++.+|++++++||+||+.|. +|+++||+|+.+||+||++|+|||.+|.. .++|+|
T Consensus        76 l~~~~~~~gi~~~~~vV~yC~~G~-~a~~~~~~l~~~G~~~v~~ydGg~~eW~~~~~~PvE  135 (136)
T d1e0ca2          76 IAGRLEELGITPDKEIVTHCQTHH-RSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVE  135 (136)
T ss_dssp             HHHHHHHTTCCTTSEEEEECSSSS-HHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCB
T ss_pred             HhhhhhhcccCCCCceEEeCCChH-HHHHHHHHHHHcCCCCcEEecCCHHHHhcCCCCCCc
Confidence            999999999999999999998665 89999999999999999999999999965 588886

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.93  E-value=3.1e-26  Score=190.72  Aligned_cols=114  Identities=37%  Similarity=0.646  Sum_probs=105.7

Q ss_pred             ceeeccCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCC-CCCccccCCCcccCcccccCCCCCCCCHHHHHH
Q 018869          235 TFQTKFQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRK-GIRSGHVPGSKCIPFPQMLDASQTLLPADELKK  313 (349)
Q Consensus       235 ~~~~~~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~-~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~  313 (349)
                      .|.+.+++.++++.+||++++++++.+|||+|+++||.|+...+.. +.+.||||||+|+||..+++.++.++++++|++
T Consensus         2 ~f~~~~~~~~i~~~~ev~~~l~~~~~~iiD~R~~~ef~G~~~~~~~~~~~~GhIpgA~~ip~~~~~~~~~~~~~~~~l~~   81 (144)
T d1rhsa2           2 IFKATLNRSLLKTYEQVLENLESKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTEDGFEKSPEELRA   81 (144)
T ss_dssp             CCCCCCCGGGEECHHHHHHHHHHCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTTSCBCCHHHHHH
T ss_pred             eeecccChHHeecHHHHHHHhcCCCcEEEECCCCHHHcCCCCCCccccceeeehhhhhhcchhhhhhhhcccCCHHHHHH
Confidence            4667788999999999999999999999999999999998776543 457899999999999999999899999999999


Q ss_pred             HHHHcCCCCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          314 RFEQEGISLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       314 ~~~~~~i~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +|.+.|++++++||+||++|+||+.++++|+.+||
T Consensus        82 ~~~~~gi~~~~~iI~yC~sG~~A~~~~~~l~~lG~  116 (144)
T d1rhsa2          82 MFEAKKVDLTKPLIATCRKGVTACHIALAAYLCGK  116 (144)
T ss_dssp             HHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHTTC
T ss_pred             HHHHcCCCCCCCEEEEecccchHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999998

>d1e0ca2 c.46.1.2 (A:136-271) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.91  E-value=2.9e-25  Score=183.10  Aligned_cols=107  Identities=21%  Similarity=0.349  Sum_probs=97.9

Q ss_pred             cCCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcC
Q 018869          240 FQPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEG  319 (349)
Q Consensus       240 ~~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~  319 (349)
                      +++..++|.++|++++++++.+|||+|++.||.|+....   .+.||||||+|+||.+++++++.++++++|+++|.+.|
T Consensus         8 ~~~~~~~s~d~l~~~l~~~~~~liD~R~~~ey~G~~~~~---~~~GhIPGAinip~~~~~~~~~~~~~~~~l~~~~~~~g   84 (136)
T d1e0ca2           8 LHDEPTASRDYLLGRLGAADLAIWDARSPQEYRGEKVLA---AKGGHIPGAVNFEWTAAMDPSRALRIRTDIAGRLEELG   84 (136)
T ss_dssp             CCSTTBCCHHHHHHHTTCTTEEEEECSCHHHHTTSSCCS---SSCSBCTTCEECCGGGGEEGGGTTEECTTHHHHHHHTT
T ss_pred             cCCCceEcHHHHHHhhCCCCeEEEECcChHHhccccccc---ccCCcchhHhhhhhhhhhccccccchhHHHhhhhhhcc
Confidence            345668999999999999899999999999999975432   37899999999999999998889999999999999999


Q ss_pred             CCCCCCEEEEcCChHHHHHHHHHHHhCcCC
Q 018869          320 ISLEKPVVTACGTGVTACILALVLFPVFFL  349 (349)
Q Consensus       320 i~~~~~vivyC~~G~rA~~~~~~L~~~g~~  349 (349)
                      ++++++||+||++|.||+.++++|+.+||.
T Consensus        85 i~~~~~vV~yC~~G~~a~~~~~~l~~~G~~  114 (136)
T d1e0ca2          85 ITPDKEIVTHCQTHHRSGLTYLIAKALGYP  114 (136)
T ss_dssp             CCTTSEEEEECSSSSHHHHHHHHHHHTTCS
T ss_pred             cCCCCceEEeCCChHHHHHHHHHHHHcCCC
Confidence            999999999999999999999999999983

>d1rhsa2 c.46.1.2 (A:150-293) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.90  E-value=1.3e-24  Score=180.79  Aligned_cols=114  Identities=18%  Similarity=0.237  Sum_probs=101.9

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhh------------cCCCCCceecCcccccccCCCCCCCCCC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ------------VAHIPGALFFDVDGVADRTTNLPHMLPS  141 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~------------~GHIPGAi~ip~~~l~~~~~~~~~~lp~  141 (349)
                      +..+++.+++.+.+++++++|||+|         +.++|.            .||||||+|+|+..+.+..    +.+.+
T Consensus         9 ~~~i~~~~ev~~~l~~~~~~iiD~R---------~~~ef~G~~~~~~~~~~~~GhIpgA~~ip~~~~~~~~----~~~~~   75 (144)
T d1rhsa2           9 RSLLKTYEQVLENLESKRFQLVDSR---------AQGRYLGTQPEPDAVGLDSGHIRGSVNMPFMNFLTED----GFEKS   75 (144)
T ss_dssp             GGGEECHHHHHHHHHHCCSEEEECS---------CHHHHHTSSCCSSSSSCCCCEETTCEECCGGGGBCTT----SCBCC
T ss_pred             hHHeecHHHHHHHhcCCCcEEEECC---------CCHHHcCCCCCCccccceeeehhhhhhcchhhhhhhh----cccCC
Confidence            5678999999999998899999999         778885            7999999999998876542    36788


Q ss_pred             HHHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCC
Q 018869          142 EEAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  201 (349)
Q Consensus       142 ~~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~  201 (349)
                      ++++++++...|++++++||+||..|. +|+.+|++|+.+||++|++|||||.+|...+.
T Consensus        76 ~~~l~~~~~~~gi~~~~~iI~yC~sG~-~A~~~~~~l~~lG~~~v~~YdGsw~eW~~~~~  134 (144)
T d1rhsa2          76 PEELRAMFEAKKVDLTKPLIATCRKGV-TACHIALAAYLCGKPDVAIYDGSWFEWFHRAP  134 (144)
T ss_dssp             HHHHHHHHHHTTCCTTSCEEEECSSSS-THHHHHHHHHHTTCCCCEEESSHHHHHHHHSC
T ss_pred             HHHHHHHHHHcCCCCCCCEEEEecccc-hHHHHHHHHHHcCCCCCEEeCCCHHHHhhcCC
Confidence            999999999999999999999998765 89999999999999999999999999987654

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=1.3e-23  Score=169.13  Aligned_cols=107  Identities=36%  Similarity=0.677  Sum_probs=95.7

Q ss_pred             CCccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 018869          241 QPHLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (349)
Q Consensus       241 ~~~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i  320 (349)
                      +|+.+++.+|+....++++.+|||+|+++||.|+..+++...+.||||||+|+||..+.. ++.+++++++++.|...++
T Consensus         1 np~~~~~~~ev~~~~~~~~~~liD~R~~~~f~G~~~~~~~~~~~G~Ipga~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~   79 (120)
T d1urha2           1 NPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVR-EGELKTTDELDAIFFGRGV   79 (120)
T ss_dssp             CGGGBCCHHHHHHHHHHTCSEEEECSCHHHHSSCCCC----CCSSSCTTCEECCGGGGBS-SSSBCCHHHHHHHHHTTTC
T ss_pred             ChhHHccHHHHHHHhhCCCcEEEeCCCHHHcCcccCCcccccccccccccchhchhhccc-ccccCCHHHhhhhhhhccc
Confidence            356789999999999999999999999999999988888888899999999999987654 5678999999999999999


Q ss_pred             CCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          321 SLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       321 ~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++++||+||++|.||+.++++|+.+||
T Consensus        80 ~~~~~ii~yC~sG~~A~~~~~~L~~lG~  107 (120)
T d1urha2          80 SYDKPIIVSCGSGVTAAVVLLALATLDV  107 (120)
T ss_dssp             CSSSCEEEECCSSSTHHHHHHHHHHTTC
T ss_pred             CccCceEEEccchhHHHHHHHHHHHcCC
Confidence            9999999999999999999999999998

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=3e-23  Score=171.88  Aligned_cols=106  Identities=24%  Similarity=0.417  Sum_probs=92.6

Q ss_pred             CCCCcEEEEeccCCCCCCCCChhhhh----------------cCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHH
Q 018869           88 REPDLKVLDASWYMPDEQRNPFQEYQ----------------VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSA  151 (349)
Q Consensus        88 ~~~~~~iIDvR~~~~~~~~~~~~~y~----------------~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~  151 (349)
                      ++++.+|||+|         +.++|.                .||||||+|+|+..+.+..    .++.+++++++.+..
T Consensus        17 ~~~~~~lvD~R---------~~~ey~G~~~~~~~~~~~~~~r~GhIpgA~nlp~~~~~~~~----~~~~~~~~~~~~~~~   83 (141)
T d1uara2          17 KEGKGALVDVR---------SPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPD----GTFKSAEELRALYEP   83 (141)
T ss_dssp             HTTSEEEEECS---------CHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTT----SCBCCHHHHHHHHGG
T ss_pred             hCCCcEEEeCC---------CHHHcCCccCcccccCcccceeeeEeCCccccccccccccc----cccccHHHHHHHHHH
Confidence            45678999999         777875                7999999999998876543    367889999999999


Q ss_pred             cCCCCCCcEEEECCCCcchHHHHHHHHHH-cCCCceeEeCCCHHHHHh-CCCCcccCC
Q 018869          152 LGLENKDGLVVYDGKGIFSAARVWWMFRV-FGHDRVWVLDGGLPRWRA-SGYDVESSA  207 (349)
Q Consensus       152 ~gi~~~~~VVvy~~~g~~~a~r~~~~L~~-~G~~~V~~L~GG~~~W~~-~G~pv~~~~  207 (349)
                      +|++++++||+||+.|. +|+.+||.|+. +||+||++|+|||.+|.. .++|++++.
T Consensus        84 ~gi~~d~~vV~yC~~G~-~As~~~~~l~~~~G~~~v~~ydGs~~eW~~~~~~Pv~~g~  140 (141)
T d1uara2          84 LGITKDKDIVVYCRIAE-RSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGE  140 (141)
T ss_dssp             GTCCTTSEEEEECSSHH-HHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCSC
T ss_pred             hCCCCCCeEEEEecCcc-hHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCC
Confidence            99999999999998765 79999999985 799999999999999966 699999874

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.87  E-value=2.2e-22  Score=165.68  Aligned_cols=107  Identities=21%  Similarity=0.293  Sum_probs=93.7

Q ss_pred             CCcccHHHHHHhcC-CCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           75 EPVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        75 ~~lIs~~~L~~~l~-~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      .+.|++++|++++. +++++|||+|         +..+|+.||||||+|+|..                 +|...+..+.
T Consensus        23 ~~~Is~~el~~~l~~~~~~~liDvR---------~~~e~~~ghIpGAi~ip~~-----------------~l~~~~~~l~   76 (136)
T d1yt8a1          23 TPSLAAEEVQALLDARAEAVILDAR---------RFDEYQTMSIPGGISVPGA-----------------ELVLRVAELA   76 (136)
T ss_dssp             CCEECHHHHHHHHHTTCSEEEEECS---------CHHHHHHSBCTTCEECCGG-----------------GHHHHHHHHC
T ss_pred             CCccCHHHHHHHHhcCCCcEEEEcC---------ChhhccceecCCchhhhhh-----------------HHHHHhhccc
Confidence            35699999999885 4568999999         8899999999999999976                 3566677778


Q ss_pred             CCCCCcEEEECCCCcchHHHHHHHHHHcCCCc-eeEeCCCHHHHHhCCCCcccCCC
Q 018869          154 LENKDGLVVYDGKGIFSAARVWWMFRVFGHDR-VWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~-V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      .+++++||+||..|. ++..++..|+..||+| |++|+||+.+|..+|+|++++.+
T Consensus        77 ~~~~~~iV~~C~~g~-rs~~aa~~L~~~G~~~~V~~L~GG~~~W~~~G~pve~g~~  131 (136)
T d1yt8a1          77 PDPRTRVIVNCAGRT-RSIIGTQSLLNAGIPNPVAALRNGTIGWTLAGQQLEHGQT  131 (136)
T ss_dssp             CSTTSEEEEECSSSH-HHHHHHHHHHHTTCSSCEEEETTHHHHHHHTTCCCBCSCC
T ss_pred             ccccceEEEEcCCCC-chHHHHHHHHHcCCCceEEEeCCcHHHHHHCCCCceeCCC
Confidence            888999999998765 7999999999999986 99999999999999999999864

>d1uara2 c.46.1.2 (A:145-285) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=1.1e-22  Score=168.29  Aligned_cols=104  Identities=29%  Similarity=0.467  Sum_probs=88.7

Q ss_pred             ccCHHHHHHHh---hcCCceEEeccCCCcccccCCCC-----CCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHH
Q 018869          245 IWTLEQVKRNI---EEGTYQLVDARSKARFDGDAPEP-----RKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFE  316 (349)
Q Consensus       245 ~i~~~~v~~~~---~~~~~~lID~R~~~ey~G~~~~~-----~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~  316 (349)
                      ++..++|.+.+   ++++.+|||+|+++||.|+.+.+     ....+.||||||+|+||.++++.+++++++++++++|.
T Consensus         3 ra~~~~v~~~~~~~~~~~~~lvD~R~~~ey~G~~~~~~~~~~~~~~r~GhIpgA~nlp~~~~~~~~~~~~~~~~~~~~~~   82 (141)
T d1uara2           3 RAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYE   82 (141)
T ss_dssp             EECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCEECCGGGGBCTTSCBCCHHHHHHHHG
T ss_pred             cccHHHHHHHHHHhhCCCcEEEeCCCHHHcCCccCcccccCcccceeeeEeCCccccccccccccccccccHHHHHHHHH
Confidence            34556666554   45688999999999999976542     23357899999999999999998899999999999999


Q ss_pred             HcCCCCCCCEEEEcCChHHHHHHHHHHHh-CcC
Q 018869          317 QEGISLEKPVVTACGTGVTACILALVLFP-VFF  348 (349)
Q Consensus       317 ~~~i~~~~~vivyC~~G~rA~~~~~~L~~-~g~  348 (349)
                      ..|++++++||+||++|.+|+.++++|.. +||
T Consensus        83 ~~gi~~d~~vV~yC~~G~~As~~~~~l~~~~G~  115 (141)
T d1uara2          83 PLGITKDKDIVVYCRIAERSSHSWFVLKYLLGY  115 (141)
T ss_dssp             GGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred             HhCCCCCCeEEEEecCcchHHHHHHHHHHHcCC
Confidence            99999999999999999999999999986 798

>d1urha2 c.46.1.2 (A:149-268) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=4.7e-22  Score=159.79  Aligned_cols=108  Identities=25%  Similarity=0.375  Sum_probs=95.1

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhh-----------cCCCCCceecCcccccccCCCCCCCCCCH
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHMLPSE  142 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~-----------~GHIPGAi~ip~~~l~~~~~~~~~~lp~~  142 (349)
                      +..+++.+++...+++++.+|||+|         +.++|.           .||||||+|+|+..+...     ..+.+.
T Consensus         2 p~~~~~~~ev~~~~~~~~~~liD~R---------~~~~f~G~~~~~~~~~~~G~Ipga~~~~~~~~~~~-----~~~~~~   67 (120)
T d1urha2           2 PEAVVKVTDVLLASHENTAQIIDAR---------PAARFNAEVDEPRPGLRRGHIPGALNVPWTELVRE-----GELKTT   67 (120)
T ss_dssp             GGGBCCHHHHHHHHHHTCSEEEECS---------CHHHHSSCCCC----CCSSSCTTCEECCGGGGBSS-----SSBCCH
T ss_pred             hhHHccHHHHHHHhhCCCcEEEeCC---------CHHHcCcccCCcccccccccccccchhchhhcccc-----cccCCH
Confidence            4567899999999888889999999         778884           799999999999875442     356778


Q ss_pred             HHHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHH
Q 018869          143 EAFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRW  196 (349)
Q Consensus       143 ~~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W  196 (349)
                      +++++.+...|++++++||+||..|. +|++++++|+.+||+||++|+|||.+|
T Consensus        68 ~~~~~~~~~~g~~~~~~ii~yC~sG~-~A~~~~~~L~~lG~~~v~~y~Gs~~eW  120 (120)
T d1urha2          68 DELDAIFFGRGVSYDKPIIVSCGSGV-TAAVVLLALATLDVPNVKLYDGAWSEW  120 (120)
T ss_dssp             HHHHHHHHTTTCCSSSCEEEECCSSS-THHHHHHHHHHTTCSSCEEECCSCCC-
T ss_pred             HHhhhhhhhcccCccCceEEEccchh-HHHHHHHHHHHcCCCCceEcCCChhhC
Confidence            89999999999999999999998765 899999999999999999999999998

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.85  E-value=5.4e-21  Score=161.04  Aligned_cols=105  Identities=27%  Similarity=0.377  Sum_probs=91.4

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      ...||+++|++++++++.+|||+|         +..+|..||||||+|+|...+                 ...+..  +
T Consensus         4 ~~~Is~~el~~~l~~~~~~ivDvR---------~~~e~~~ghIpga~~~~~~~~-----------------~~~~~~--~   55 (157)
T d1yt8a3           4 ADTIDPTTLADWLGEPGTRVLDFT---------ASANYAKRHIPGAAWVLRSQL-----------------KQALER--L   55 (157)
T ss_dssp             CCEECHHHHHHHTTSTTEEEEECS---------CHHHHHHCBCTTCEECCGGGH-----------------HHHHHH--H
T ss_pred             CCEECHHHHHHHHhCCCeEEEEeC---------CHHHHhhcccccceecccccc-----------------cccccc--c
Confidence            346999999999998889999999         789999999999999998753                 333333  2


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      .++++||+||..|. ++..+++.|+.+||++|++|+||+.+|.++|+|+++++.
T Consensus        56 ~~~~~vv~~c~~g~-rs~~~a~~l~~~G~~~v~~L~GG~~~W~~aGlp~~~~~~  108 (157)
T d1yt8a3          56 GTAERYVLTCGSSL-LARFAVAEVQALSGKPVFLLDGGTSAWVAAGLPTEDGES  108 (157)
T ss_dssp             CCCSEEEEECSSSH-HHHHHHHHHHHHHCSCEEEETTHHHHHHHTTCCCBCSSC
T ss_pred             ccCcceeeccCCcc-hHHHHHHHHhcccCceEEEecCCHHHHhhCCCCCcCCCC
Confidence            57899999998765 799999999999999999999999999999999999764

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.85  E-value=6.9e-22  Score=158.88  Aligned_cols=113  Identities=19%  Similarity=0.200  Sum_probs=90.6

Q ss_pred             CCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           75 EPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      +..|+++.+.+++++ +.+|||||         ++.+|..||||||+|+|+..+....     .....+.+.++..  .+
T Consensus         7 p~~i~~~~a~~l~~~-g~~liDvR---------~~~e~~~ghi~ga~~ip~~~~~~~~-----~~~~~~~~~~~~~--~~   69 (119)
T d1tq1a_           7 PSSVSVTVAHDLLLA-GHRYLDVR---------TPEEFSQGHACGAINVPYMNRGASG-----MSKNTDFLEQVSS--HF   69 (119)
T ss_dssp             CEEEEHHHHHHHHHH-TCCEEEES---------CHHHHHHCCBTTBEECCSCCCSTTT-----CCCTTTHHHHHTT--TC
T ss_pred             CCccCHHHHHHHHHC-cCEEEECC---------CHHHHHcCCCCCccchhhccccccc-----ccccHHHHHHHHH--hc
Confidence            456899988888765 56899999         8899999999999999987643321     2223334444443  45


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCccc
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      +++++|||||..|. ++..++.+|+.+||+||++|+||+.+|.++|+|++.
T Consensus        70 ~~~~~iv~~C~~G~-rs~~a~~~L~~~G~~nv~~l~GG~~~W~~~g~P~ea  119 (119)
T d1tq1a_          70 GQSDNIIVGCQSGG-RSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTKA  119 (119)
T ss_dssp             CTTSSEEEEESSCS-HHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC-
T ss_pred             CCCcEEEEEcCCcC-cHHHHHHHHHhcccCCeEEecChHHHHHHCCCCccC
Confidence            78899999998765 799999999999999999999999999999999873

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=2.6e-21  Score=150.73  Aligned_cols=99  Identities=24%  Similarity=0.266  Sum_probs=83.8

Q ss_pred             CcccHHHHHHhc-CCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCC
Q 018869           76 PVVSVDWLHANL-REPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGL  154 (349)
Q Consensus        76 ~lIs~~~L~~~l-~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi  154 (349)
                      ++.|+++|++.+ ++++++|||||         ++.+|..||||||+|+|...                 +...+..+..
T Consensus         2 ~v~S~~~l~~~l~~~~~~~liDvR---------~~~e~~~ghIpgAi~~~~~~-----------------~~~~~~~~~~   55 (101)
T d1yt8a2           2 AVRTFHDIRAALLARRELALLDVR---------EEDPFAQAHPLFAANLPLSR-----------------LELEIHARVP   55 (101)
T ss_dssp             EEECHHHHHHHHHHTCCBEEEECS---------CHHHHTTSBCTTCEECCGGG-----------------HHHHHHHHSC
T ss_pred             CcCcHHHHHHHHHCCCCeEEEECC---------CHHHHHhccCCCcccccccc-----------------hhhhhhhccc
Confidence            357899999877 44579999999         89999999999999999864                 3344555666


Q ss_pred             CCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCC
Q 018869          155 ENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGY  201 (349)
Q Consensus       155 ~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~  201 (349)
                      +++++||+||..+. ++..+++.|+.+||+||++|+||+.+|+++|.
T Consensus        56 ~~~~~vv~~~~~g~-~s~~~~~~l~~~G~~nV~~l~GG~~~W~~aGg  101 (101)
T d1yt8a2          56 RRDTPITVYDDGEG-LAPVAAQRLHDLGYSDVALLDGGLSGWRNAGG  101 (101)
T ss_dssp             CTTSCEEEECSSSS-HHHHHHHHHHHTTCSSEEEETTHHHHHHHTTC
T ss_pred             ccCceeeeccchhh-hHHHHHHHHHHcCCCcEEEeCChHHHHHHCcC
Confidence            77888989987665 89999999999999999999999999999873

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=1.3e-21  Score=154.55  Aligned_cols=100  Identities=21%  Similarity=0.302  Sum_probs=87.5

Q ss_pred             CcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcCCC
Q 018869           76 PVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALGLE  155 (349)
Q Consensus        76 ~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~gi~  155 (349)
                      ..||++++++++++++++|||+|         ++.+|..||||||+|+|.+                 +|++.+..  ++
T Consensus         5 ~~Is~~e~~~~l~~~~~~liDvR---------~~~e~~~ghI~gA~~ip~~-----------------~l~~~~~~--~~   56 (108)
T d1gmxa_           5 ECINVADAHQKLQEKEAVLVDIR---------DPQSFAMGHAVQAFHLTND-----------------TLGAFMRD--ND   56 (108)
T ss_dssp             EEECHHHHHHHHHTTCCEEEECS---------CHHHHHHCEETTCEECCHH-----------------HHHHHHHH--SC
T ss_pred             CEeCHHHHHHHHHCCCeEEEECC---------CHHHHHhcCCCCcccccch-----------------hHHHHhhh--cc
Confidence            45999999999988889999999         8899999999999999975                 45566665  47


Q ss_pred             CCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCccc
Q 018869          156 NKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVES  205 (349)
Q Consensus       156 ~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~  205 (349)
                      ++++|||||..|. ++.++++.|+..||+||++|+||+.+|.+ ++|++.
T Consensus        57 ~~~~ivv~c~~g~-rs~~~a~~L~~~G~~~v~~l~GG~~~W~~-~~p~e~  104 (108)
T d1gmxa_          57 FDTPVMVMCYHGN-SSKGAAQYLLQQGYDVVYSIDGGFEAWQR-QFPAEV  104 (108)
T ss_dssp             TTSCEEEECSSSS-HHHHHHHHHHHHTCSSEEEETTHHHHHHH-HCGGGE
T ss_pred             ccCcccccCCCCh-HHHHHHHHHHHcCCCCEEEEcChHHHHHH-cCCCcc
Confidence            8899999998765 79999999999999999999999999975 488764

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

Probab=99.82  E-value=1.3e-20  Score=155.01  Aligned_cols=106  Identities=17%  Similarity=0.285  Sum_probs=91.0

Q ss_pred             CCcccHHHHHHhcC-CCCcEEEEeccCCCCCCCCChhhhhcCC---CCCceecCcccccccCCCCCCCCCCHHHHHHHHH
Q 018869           75 EPVVSVDWLHANLR-EPDLKVLDASWYMPDEQRNPFQEYQVAH---IPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVS  150 (349)
Q Consensus        75 ~~lIs~~~L~~~l~-~~~~~iIDvR~~~~~~~~~~~~~y~~GH---IPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~  150 (349)
                      ...||++++++++. +++++|||||         +..+|+.+|   |+||+|+|...                 ++..+.
T Consensus        22 ~~~Isp~e~~~ll~~~~~~~lIDvR---------~~~E~~~~hip~i~~a~~ip~~~-----------------l~~~~~   75 (137)
T d1qxna_          22 MVMLSPKDAYKLLQENPDITLIDVR---------DPDELKAMGKPDVKNYKHMSRGK-----------------LEPLLA   75 (137)
T ss_dssp             SEEECHHHHHHHHHHCTTSEEEECC---------CHHHHHHTCEECCSSEEECCTTT-----------------SHHHHH
T ss_pred             CCEEcHHHHHHHHHcCcCEEEEECC---------cHHHHHHhccccccccccCCccc-----------------cccccc
Confidence            45699999999985 4679999999         789999999   56688888653                 345566


Q ss_pred             HcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCcccCC
Q 018869          151 ALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSA  207 (349)
Q Consensus       151 ~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~  207 (349)
                      ..+++++++|||||..|. +|.+++..|+.+||+||++|+||+.+|..+|+|+....
T Consensus        76 ~~~~~~~~~ivvyC~~G~-rs~~aa~~L~~~G~~nV~~l~GG~~~W~~~g~P~~~~~  131 (137)
T d1qxna_          76 KSGLDPEKPVVVFCKTAA-RAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRS  131 (137)
T ss_dssp             HHCCCTTSCEEEECCSSS-CHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCC
T ss_pred             ccccCcccceeeeecccc-hHHHHHHHHHHcCCCcEEEecCHHHHHHHcCCCCCCCC
Confidence            678899999999998775 79999999999999999999999999999999987654

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.82  E-value=3.4e-21  Score=159.01  Aligned_cols=111  Identities=16%  Similarity=0.216  Sum_probs=87.1

Q ss_pred             HhcCCCCcEEEEeccCCCCCCCCChhhhh-----------cCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc-
Q 018869           85 ANLREPDLKVLDASWYMPDEQRNPFQEYQ-----------VAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL-  152 (349)
Q Consensus        85 ~~l~~~~~~iIDvR~~~~~~~~~~~~~y~-----------~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~-  152 (349)
                      +.+. ++++|||+|         +.++|.           .||||||+|+|+..+.....+ ...+.+++++.+.+..+ 
T Consensus         7 ~~~~-p~~vlvD~R---------~~~ef~G~~~~~~~~~~~GHIpgAvnip~~~~~~~~~~-~~~~~~~~~l~~~~~~~~   75 (139)
T d1okga2           7 DEIP-PQAIITDAR---------SADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGD-GKVLRSEEEIRHNIMTVV   75 (139)
T ss_dssp             GGSC-TTCCEEECS---------CHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSS-SCEECCHHHHHHHHHTTC
T ss_pred             ccCC-CCeEEEeCC---------CHHHhCCcCCCcccCCcCceeCCCeeccchhhcccccc-ccccCCHHHhhhhhhhhh
Confidence            3443 579999999         777776           799999999999875433222 12455677888877654 


Q ss_pred             ----CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHh-CCCCcccCC
Q 018869          153 ----GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRA-SGYDVESSA  207 (349)
Q Consensus       153 ----gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~-~G~pv~~~~  207 (349)
                          +++++++||+||..|. +|+++||+|+.+||+||++|+|||.+|.+ .++||+++.
T Consensus        76 ~~~~~~~~~~~vV~yC~sG~-~Aa~~~~~L~~~G~~~v~vydGsw~eW~~~~~~Pv~~~~  134 (139)
T d1okga2          76 QGAGDAADLSSFVFSCGSGV-TACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRSI  134 (139)
T ss_dssp             C-----CCCTTSEEECSSSS-THHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHHH
T ss_pred             hhccCCCCCCeEEEECCCcH-HHHHHHHHHHHhCCCCccCCCCCHHHHhCCCCCCeeecC
Confidence                6778899999998775 89999999999999999999999999965 678888753

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.82  E-value=8.3e-21  Score=155.18  Aligned_cols=111  Identities=21%  Similarity=0.287  Sum_probs=87.9

Q ss_pred             CCCcccHHHHHHhcCCCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHcC
Q 018869           74 KEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSALG  153 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~g  153 (349)
                      ....|++++|.+++++++++|||||         +..+|+.||||||+|+|+..+..             .+.+++..  
T Consensus         6 ~v~~I~~~el~~~~~~~~v~iIDvR---------~~~e~~~ghIpgAinip~~~~~~-------------~~~~~~~~--   61 (132)
T d1t3ka_           6 SISYITSTQLLPLHRRPNIAIIDVR---------DEERNYDGHIAGSLHYASGSFDD-------------KISHLVQN--   61 (132)
T ss_dssp             SSEEECTTTTTTCCCCTTEEEEEES---------CSHHHHSSCCCSSEEECCSSSST-------------THHHHHHT--
T ss_pred             CCCEECHHHHHHHHhCCCeEEEEcc---------CHHHHHhccCcccceeeeecccc-------------cccccccc--
Confidence            3467999999999998899999999         67899999999999999976643             23344443  


Q ss_pred             CCCCCcEEEECCCCcchHHHHH--------HHHHHcCCCceeEeCCCHHHHHhCCCCcccCCC
Q 018869          154 LENKDGLVVYDGKGIFSAARVW--------WMFRVFGHDRVWVLDGGLPRWRASGYDVESSAS  208 (349)
Q Consensus       154 i~~~~~VVvy~~~g~~~a~r~~--------~~L~~~G~~~V~~L~GG~~~W~~~G~pv~~~~~  208 (349)
                      ..+++.+|+||..+..++..++        +.|..+||+||++|+||+.+|.++|+|+.+...
T Consensus        62 ~~~~~~iv~~c~~~~~~~~~aa~~l~~~~~~~l~~~G~~~v~~l~GG~~~W~~~g~pv~~~~~  124 (132)
T d1t3ka_          62 VKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE  124 (132)
T ss_dssp             CCSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred             cccccceEEEeccccccchHHHHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHcCCCcccCCC
Confidence            3567889999976654544443        334457999999999999999999999988653

>d1okga2 c.46.1.2 (A:163-301) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.80  E-value=1.7e-20  Score=154.80  Aligned_cols=91  Identities=24%  Similarity=0.402  Sum_probs=79.4

Q ss_pred             CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCC---CCCCCHHHHHHHHHHc-----CCCCCCCEEEE
Q 018869          258 GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS---QTLLPADELKKRFEQE-----GISLEKPVVTA  329 (349)
Q Consensus       258 ~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~---~~l~~~~el~~~~~~~-----~i~~~~~vivy  329 (349)
                      ++.+|||+|+++||.|...++....+.||||||+|+||.+++...   ..++++++|++.|...     +++++++||+|
T Consensus        11 p~~vlvD~R~~~ef~G~~~~~~~~~~~GHIpgAvnip~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~vV~y   90 (139)
T d1okga2          11 PQAIITDARSADRFASTVRPYAADKMPGHIEGARNLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGAGDAADLSSFVFS   90 (139)
T ss_dssp             TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCEECCGGGGEECCSSSCEECCHHHHHHHHHTTCC-----CCCTTSEEE
T ss_pred             CCeEEEeCCCHHHhCCcCCCcccCCcCceeCCCeeccchhhccccccccccCCHHHhhhhhhhhhhhccCCCCCCeEEEE
Confidence            578999999999999998877777789999999999999876543   3589999999999854     67788999999


Q ss_pred             cCChHHHHHHHHHHHhCcC
Q 018869          330 CGTGVTACILALVLFPVFF  348 (349)
Q Consensus       330 C~~G~rA~~~~~~L~~~g~  348 (349)
                      |++|+||+.++++|+.+||
T Consensus        91 C~sG~~Aa~~~~~L~~~G~  109 (139)
T d1okga2          91 CGSGVTACINIALVHHLGL  109 (139)
T ss_dssp             CSSSSTHHHHHHHHHHTTS
T ss_pred             CCCcHHHHHHHHHHHHhCC
Confidence            9999999999999999998

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.78  E-value=1.4e-19  Score=147.44  Aligned_cols=101  Identities=20%  Similarity=0.144  Sum_probs=85.4

Q ss_pred             CCcccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHHHHHc
Q 018869           75 EPVVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~~~~~  152 (349)
                      ...|+++++++++.+.  +++|||||         +..+|..||||||+|+|+..                 +......+
T Consensus        22 ~~~I~~~e~~~~l~~~~~~~~liDvR---------~~~e~~~ghipgai~~p~~~-----------------~~~~~~~~   75 (130)
T d1yt8a4          22 VERLDLAGLAQWQDEHDRTTYLLDVR---------TPEEYEAGHLPGSRSTPGGQ-----------------LVQETDHV   75 (130)
T ss_dssp             CEEECHHHHHHHHHCTTSCEEEEECS---------CHHHHHHCBCTTCEECCHHH-----------------HHHSHHHH
T ss_pred             CcccCHHHHHHHHHccCCCEEEEECC---------CcHHHhcCccCCcccccccc-----------------cccccccc
Confidence            3569999999998643  58999999         78999999999999999864                 33444556


Q ss_pred             CCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCHHHHHhCCCCc
Q 018869          153 GLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDV  203 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~~~W~~~G~pv  203 (349)
                      +.+++++||+||.+|. +|..++..|+.+|| +|++|+||+.+|..++...
T Consensus        76 ~~~~~~~ivl~C~~G~-rS~~aa~~L~~~G~-~v~~l~GG~~aw~~~~g~~  124 (130)
T d1yt8a4          76 ASVRGARLVLVDDDGV-RANMSASWLAQMGW-QVAVLDGLSEADFSERGAW  124 (130)
T ss_dssp             CCSBTCEEEEECSSSS-HHHHHHHHHHHTTC-EEEEECSCCGGGCCBCSSC
T ss_pred             cCCccceEEeecCCCc-cHHHHHHHHHHcCC-CeEEEcCchHHHHHhcCCC
Confidence            7889999999998765 89999999999999 7999999999998776543

>d1uara1 c.46.1.2 (A:2-144) Sulfurtransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.72  E-value=1.6e-18  Score=143.44  Aligned_cols=97  Identities=18%  Similarity=0.274  Sum_probs=84.5

Q ss_pred             CCccccCHHHHHHHhhcCCceEEeccC-CCcccccCCCCCCCCCccccCCCcccCcccccCCC--CCCCCHHHHHHHHHH
Q 018869          241 QPHLIWTLEQVKRNIEEGTYQLVDARS-KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS--QTLLPADELKKRFEQ  317 (349)
Q Consensus       241 ~~~~~i~~~~v~~~~~~~~~~lID~R~-~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~--~~l~~~~el~~~~~~  317 (349)
                      +++.+||.+||++++++++.+|||+|. ..+|           ..||||||+|+||......+  +.+.+.++|+++|.+
T Consensus         4 ~p~~lVs~~~l~~~l~~~~v~iiDvr~~~~~y-----------~~gHIPgAi~~~~~~~~~~~~~~~l~~~~~l~~~~~~   72 (143)
T d1uara1           4 HPEVLVSTDWVQEHLEDPKVRVLEVDEDILLY-----------DTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMER   72 (143)
T ss_dssp             CGGGEECHHHHHTTTTCTTEEEEEECSSTTHH-----------HHCBCTTCEEECHHHHHBCSSSSSBCCHHHHHHHHHH
T ss_pred             CCCccCcHHHHHHHhCCCCeEEEECCCCHHHH-----------hcCCCCCcccccccccccccccccchhhHHHHHHhhh
Confidence            355789999999999988999999995 6788           78999999999997655433  457899999999999


Q ss_pred             cCCCCCCCEEEEcCChH-HHHHHHHHHHhCcC
Q 018869          318 EGISLEKPVVTACGTGV-TACILALVLFPVFF  348 (349)
Q Consensus       318 ~~i~~~~~vivyC~~G~-rA~~~~~~L~~~g~  348 (349)
                      .||+++++||+||++|. +|+.+++.|+.+||
T Consensus        73 ~Gi~~~~~iVvy~~~~~~~a~~~~~~l~~~G~  104 (143)
T d1uara1          73 LGISNDTTVVLYGDKNNWWAAYAFWFFKYNGH  104 (143)
T ss_dssp             TTCCTTCEEEEECHHHHHHHHHHHHHHHHTTC
T ss_pred             hccCCCceEEEecCCCcccchhHHHHHHHhCC
Confidence            99999999999998775 67889999999998

>d1urha1 c.46.1.2 (A:2-148) 3-mercaptopyruvate sulfurtransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Escherichia coli [TaxId: 562]

Probab=99.69  E-value=1.1e-17  Score=138.85  Aligned_cols=104  Identities=15%  Similarity=0.183  Sum_probs=83.0

Q ss_pred             cccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCC----CCCCHHHHHHHHHHcC
Q 018869          244 LIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQ----TLLPADELKKRFEQEG  319 (349)
Q Consensus       244 ~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~----~l~~~~el~~~~~~~~  319 (349)
                      ++|+.++|++++++++.+|||+|....+.+.. ......+.||||||+|+++..+.+...    .+.+++++.+++.+.|
T Consensus         3 ~lVs~~wL~~~L~~~~v~iiD~r~~~~~~~~~-~~~~~y~~gHIPGAi~~~~~~~~~~~~~~~~~~p~~~~~~~~l~~~G   81 (147)
T d1urha1           3 WFVGADWLAEHIDDPEIQIIDARMASPGQEDR-NVAQEYLNGHIPGAVFFDIEALSDHTSPLPHMLPRPETFAVAMRELG   81 (147)
T ss_dssp             CEECHHHHHTTTTCTTEEEEECCCCCSSCTTC-CHHHHHHHSBCTTCEECCGGGGSCSSSSSSSCCCCHHHHHHHHHHTT
T ss_pred             ccCcHHHHHHHhCCCCeEEEEeeCCCCCccCc-cHHHHHHhCCccccEEeehhhhccccccccccCCCHHHHHHHHHHhC
Confidence            57999999999999999999999543221100 000012679999999999998876543    4668999999999999


Q ss_pred             CCCCCCEEEEcCC-hHHHHHHHHHHHhCcC
Q 018869          320 ISLEKPVVTACGT-GVTACILALVLFPVFF  348 (349)
Q Consensus       320 i~~~~~vivyC~~-G~rA~~~~~~L~~~g~  348 (349)
                      |+++++||+||.+ |..|+.+++.|+.+||
T Consensus        82 i~~~~~vVvY~~~~~~~A~r~~~~L~~~G~  111 (147)
T d1urha1          82 VNQDKHLIVYDEGNLFSAPRAWWMLRTFGV  111 (147)
T ss_dssp             CCTTSEEEEECSSSCSSHHHHHHHHHHTTC
T ss_pred             cCCCCeEEEEeCCCcccchhHHHHHHhhcc
Confidence            9999999999965 6788999999999998

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.4e-17  Score=137.59  Aligned_cols=116  Identities=19%  Similarity=0.351  Sum_probs=83.4

Q ss_pred             CCCcccHHHHHHhcC--CCCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccc-----cCCCCCCCCCCHHHHH
Q 018869           74 KEPVVSVDWLHANLR--EPDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVAD-----RTTNLPHMLPSEEAFA  146 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~--~~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~-----~~~~~~~~lp~~~~~~  146 (349)
                      ....+|++||+++++  +++++|||||         +..+|..||||||+|+++..+..     ........++..+...
T Consensus        14 ~~~~~s~e~L~~~l~~~~~~~lilDvR---------~~~ey~~~HI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (154)
T d1hzma_          14 MAISKTVAWLNEQLELGNERLLLMDCR---------PQELYESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGEDRD   84 (154)
T ss_dssp             CSSBSCCCCHHHHHHHCSSSCEEECCS---------TTHHHHHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHHHH
T ss_pred             ccCccCHHHHHHHHhcCCCCEEEEECC---------CHHHHhcCCCCCCcccCcHHHHhhhccCCcccccccCCcHHHHH
Confidence            345699999999984  4579999999         88999999999999999865321     1223344555544444


Q ss_pred             HHHHHcCCCCCCcEEEECCCCc------chHHHHHHHHHHcCC--CceeEeCCCHHHHHhCCCC
Q 018869          147 AAVSALGLENKDGLVVYDGKGI------FSAARVWWMFRVFGH--DRVWVLDGGLPRWRASGYD  202 (349)
Q Consensus       147 ~~~~~~gi~~~~~VVvy~~~g~------~~a~r~~~~L~~~G~--~~V~~L~GG~~~W~~~G~p  202 (349)
                      .+.+   ..+++.||+||..+.      ..+.+++++++.+|.  .+|++|+||+.+|.+. +|
T Consensus        85 ~~~~---~~~~~~VVvYd~~~~~~~~~~~~~~~~~~l~~~l~~~~~~v~iL~GG~~~w~~~-yp  144 (154)
T d1hzma_          85 RFTR---RCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCRAFYLEGGFSKFQAE-FS  144 (154)
T ss_dssp             HHHH---STTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCCCEECCCCHHHHHHH-HC
T ss_pred             HHhh---cCCCCeEEEEcCCCchhhhhHHHHHHHHHHHHHHHhcCCeEEEEeCcHHHHHHH-Ch
Confidence            4433   356788999986532      235677787777654  3799999999999864 44

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=9.3e-18  Score=136.89  Aligned_cols=110  Identities=18%  Similarity=0.222  Sum_probs=75.4

Q ss_pred             cccHHHHHHhcCCC--CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCC--CCCCCCCHHHHHHHHHHc
Q 018869           77 VVSVDWLHANLREP--DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTN--LPHMLPSEEAFAAAVSAL  152 (349)
Q Consensus        77 lIs~~~L~~~l~~~--~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~--~~~~lp~~~~~~~~~~~~  152 (349)
                      .||++||+++++++  +++|||+|         +..+|..||||||+|||...+......  +...++  ....+.+.  
T Consensus         2 ~Is~~eL~~~l~~~~~~~liiDvR---------~~~ey~~~hI~gAinip~~~l~~~~~~~~l~~~~~--~~~~~~~~--   68 (135)
T d2gwfa1           2 AITAKELYTMMTDKNISLIIMDAR---------RMQDYQDSCILHSLSVPEEAISPGVTASWIEAHLP--DDSKDTWK--   68 (135)
T ss_dssp             EECHHHHHHHHHSTTSCEEEEECS---------CHHHHHHSCBTTCEECCGGGCCTTCCHHHHHHTSC--HHHHHHHH--
T ss_pred             eECHHHHHHHHhcCCCCEEEEEec---------CCccccCCccCCeEEeCHHHcccccchhhhhhhhh--HHHHHHHh--
Confidence            48999999999764  59999999         889999999999999999876532110  011111  22333333  


Q ss_pred             CCCCCCcEEEECCCCcchH----HHHH---HHHH-----HcCCCceeEeCCCHHHHHhC
Q 018869          153 GLENKDGLVVYDGKGIFSA----ARVW---WMFR-----VFGHDRVWVLDGGLPRWRAS  199 (349)
Q Consensus       153 gi~~~~~VVvy~~~g~~~a----~r~~---~~L~-----~~G~~~V~~L~GG~~~W~~~  199 (349)
                      ...+.+.||+||..+....    ..+.   +.|.     ..|+.+|++|+||+.+|.+.
T Consensus        69 ~~~~~~~iV~yd~~s~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~iL~GG~~~w~~~  127 (135)
T d2gwfa1          69 KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC  127 (135)
T ss_dssp             TTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH
T ss_pred             ccCCCCeEEEEeCCCCcccHHHHHHHHHHHHHHhcccccccCCCcEEEEechHHHHHHh
Confidence            3456788999997654322    2222   2222     34678899999999999876

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=1.5e-17  Score=140.15  Aligned_cols=100  Identities=16%  Similarity=0.142  Sum_probs=76.9

Q ss_pred             CCcccHHHHHHhcCC------CCcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHHH
Q 018869           75 EPVVSVDWLHANLRE------PDLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAAA  148 (349)
Q Consensus        75 ~~lIs~~~L~~~l~~------~~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~~  148 (349)
                      .+.||+++|.+++++      ++++|||||         +..+|..||||||+|+|....                +.+.
T Consensus        22 ~k~Is~~~l~~ll~~~~~~~~~~~~IIDvR---------~~~Ey~~gHI~gAinip~~~~----------------~~~~   76 (161)
T d1c25a_          22 LKYISPEIMASVLNGKFANLIKEFVIIDCR---------YPYEYEGGHIKGAVNLHMEEE----------------VEDF   76 (161)
T ss_dssp             SCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHH----------------HHHH
T ss_pred             CCccCHHHHHHHHhhhhhcccCCEEEEECC---------CHHHHHhhhcCCcEEcCcHHH----------------HHHH
Confidence            467999999999875      268999999         789999999999999996542                1111


Q ss_pred             HHH----cCCCCCCcEEEECCCCcchHHHHHHHHHHc----------CCCceeEeCCCHHHHHhC
Q 018869          149 VSA----LGLENKDGLVVYDGKGIFSAARVWWMFRVF----------GHDRVWVLDGGLPRWRAS  199 (349)
Q Consensus       149 ~~~----~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~----------G~~~V~~L~GG~~~W~~~  199 (349)
                      +..    ....++..||+||..++.++.+++..|+..          ||++|++|+||+.+|.+.
T Consensus        77 l~~~~~~~~~~~~~~vV~yc~~s~~rs~~~a~~l~~~~~~~~~~~~~g~~~V~vL~GG~~~w~~~  141 (161)
T d1c25a_          77 LLKKPIVPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMK  141 (161)
T ss_dssp             TTTSCCCCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHH
T ss_pred             HhhhhhhhhhccCCeEEEEeccccccHHHHHHHHHHHHHhhccccccCCCeEEEECCcHHHHHHH
Confidence            111    122344568889986666888888888754          999999999999999864

>d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.8e-16  Score=135.13  Aligned_cols=106  Identities=16%  Similarity=0.192  Sum_probs=77.9

Q ss_pred             CCCcccHHHHHHhcCCC------CcEEEEeccCCCCCCCCChhhhhcCCCCCceecCcccccccCCCCCCCCCCHHHHHH
Q 018869           74 KEPVVSVDWLHANLREP------DLKVLDASWYMPDEQRNPFQEYQVAHIPGALFFDVDGVADRTTNLPHMLPSEEAFAA  147 (349)
Q Consensus        74 ~~~lIs~~~L~~~l~~~------~~~iIDvR~~~~~~~~~~~~~y~~GHIPGAi~ip~~~l~~~~~~~~~~lp~~~~~~~  147 (349)
                      .-..|++++|.+++.++      +++|||||         +..+|..|||+||+|+|...+....           .+..
T Consensus        21 ~~k~Isp~eL~~ll~~~~~~~~~~~lIID~R---------~~~Ey~~gHI~gAiNi~~~~~~~~~-----------~~~~   80 (174)
T d1ymka1          21 DLKYISPETMVALLTGKFSNIVDKFVIVDCR---------YPYEYEGGHIKTAVNLPLERDAESF-----------LLKS   80 (174)
T ss_dssp             TSCEECHHHHHHHHTTTTTTTEEEEEEEECS---------CHHHHHTCEETTCEECCSHHHHHHH-----------HHTT
T ss_pred             CCcEeCHHHHHHHHhhhhhcccCCEEEEECC---------CchhhhhhhcCCccccCchHHHHHH-----------HHHh
Confidence            45689999999999753      58999999         7899999999999999987532110           0000


Q ss_pred             HHHHcCCCCCCcEEEECCCCcchHHHHHHHHHH----------cCCCceeEeCCCHHHHHhC
Q 018869          148 AVSALGLENKDGLVVYDGKGIFSAARVWWMFRV----------FGHDRVWVLDGGLPRWRAS  199 (349)
Q Consensus       148 ~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~----------~G~~~V~~L~GG~~~W~~~  199 (349)
                      .......+++..||+||..++.++..++..|+.          .|+++|++|+||+.+|.+.
T Consensus        81 ~~~~~~~~~~~~vV~yc~~s~~r~~~~a~~l~~~~~~~~~~~~~g~~~VyiL~GGf~~f~~~  142 (174)
T d1ymka1          81 PIAPCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQ  142 (174)
T ss_dssp             TCCC----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTT
T ss_pred             hhhhhhhccCceEEEEeCCCCchHHHHHHHHHHHHHHhhhccccCCceEEEecCcHHHHHHh
Confidence            000011245567999998777688888888875          4999999999999999753

>d1gmxa_ c.46.1.3 (A:) Sulfurtransferase GlpE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Sulfurtransferase GlpE
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=3.4e-16  Score=122.97  Aligned_cols=79  Identities=19%  Similarity=0.232  Sum_probs=70.7

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .|+.+++.+.+++++.+|||+|++.||           ..||||||+|+|.+             +|.+.+.+  +++++
T Consensus         6 ~Is~~e~~~~l~~~~~~liDvR~~~e~-----------~~ghI~gA~~ip~~-------------~l~~~~~~--~~~~~   59 (108)
T d1gmxa_           6 CINVADAHQKLQEKEAVLVDIRDPQSF-----------AMGHAVQAFHLTND-------------TLGAFMRD--NDFDT   59 (108)
T ss_dssp             EECHHHHHHHHHTTCCEEEECSCHHHH-----------HHCEETTCEECCHH-------------HHHHHHHH--SCTTS
T ss_pred             EeCHHHHHHHHHCCCeEEEECCCHHHH-----------HhcCCCCcccccch-------------hHHHHhhh--ccccC
Confidence            488999999999889999999999999           78999999999864             45666665  78999


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcCC
Q 018869          325 PVVTACGTGVTACILALVLFPVFFL  349 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~~  349 (349)
                      +||+||.+|.||..++..|...||.
T Consensus        60 ~ivv~c~~g~rs~~~a~~L~~~G~~   84 (108)
T d1gmxa_          60 PVMVMCYHGNSSKGAAQYLLQQGYD   84 (108)
T ss_dssp             CEEEECSSSSHHHHHHHHHHHHTCS
T ss_pred             cccccCCCChHHHHHHHHHHHcCCC
Confidence            9999999999999999999999983

>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.56  E-value=4.9e-16  Score=126.12  Aligned_cols=80  Identities=24%  Similarity=0.297  Sum_probs=69.1

Q ss_pred             ccCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCC
Q 018869          245 IWTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISL  322 (349)
Q Consensus       245 ~i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~  322 (349)
                      .|+.+++++.+.+.  +++|||+|++.||           ..||||||+|+|+.++.+             .......++
T Consensus        24 ~I~~~e~~~~l~~~~~~~~liDvR~~~e~-----------~~ghipgai~~p~~~~~~-------------~~~~~~~~~   79 (130)
T d1yt8a4          24 RLDLAGLAQWQDEHDRTTYLLDVRTPEEY-----------EAGHLPGSRSTPGGQLVQ-------------ETDHVASVR   79 (130)
T ss_dssp             EECHHHHHHHHHCTTSCEEEEECSCHHHH-----------HHCBCTTCEECCHHHHHH-------------SHHHHCCSB
T ss_pred             ccCHHHHHHHHHccCCCEEEEECCCcHHH-----------hcCccCCccccccccccc-------------ccccccCCc
Confidence            58999999998653  4789999999999           789999999999876643             233346788


Q ss_pred             CCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          323 EKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       323 ~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++||+||++|.||..++..|+.+||
T Consensus        80 ~~~ivl~C~~G~rS~~aa~~L~~~G~  105 (130)
T d1yt8a4          80 GARLVLVDDDGVRANMSASWLAQMGW  105 (130)
T ss_dssp             TCEEEEECSSSSHHHHHHHHHHHTTC
T ss_pred             cceEEeecCCCccHHHHHHHHHHcCC
Confidence            99999999999999999999999998

>d1rhsa1 c.46.1.2 (A:1-149) Rhodanese {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Rhodanese
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.55  E-value=2.7e-15  Score=124.52  Aligned_cols=95  Identities=16%  Similarity=0.150  Sum_probs=80.9

Q ss_pred             cccCHHHHHHHhh----cCCceEEeccC--------CCcccccCCCCCCCCCccccCCCcccCcccccCCC----CCCCC
Q 018869          244 LIWTLEQVKRNIE----EGTYQLVDARS--------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLP  307 (349)
Q Consensus       244 ~~i~~~~v~~~~~----~~~~~lID~R~--------~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~----~~l~~  307 (349)
                      .+||.+||+++++    +++.+|||+|.        .++|           ..||||||+|++++.+....    ..+.+
T Consensus         8 ~lVs~~wL~~~L~~~~~~~~~~IiD~r~~~~~~~~~~~~y-----------~~gHIPGAv~~~~~~~~~~~~~~~~~~~~   76 (149)
T d1rhsa1           8 ALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEY-----------LERHVPGASFFDIEECRDKASPYEVMLPS   76 (149)
T ss_dssp             SEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHH-----------HHSBCTTCEECCTTTSSCTTSSSSSCCCC
T ss_pred             CccCHHHHHHHHhccCCCCCEEEEEecCcCCCCcchHHHH-----------HHhcccCceeccHHhhcccccchhhhhhh
Confidence            4799999999997    34789999994        3456           78999999999998876543    34678


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCC---hHHHHHHHHHHHhCcCC
Q 018869          308 ADELKKRFEQEGISLEKPVVTACGT---GVTACILALVLFPVFFL  349 (349)
Q Consensus       308 ~~el~~~~~~~~i~~~~~vivyC~~---G~rA~~~~~~L~~~g~~  349 (349)
                      ++++.+.|...||+++++||+||++   +..|+.+++.|+.+||.
T Consensus        77 ~~~~~~~l~~~Gi~~~~~vVvy~~~~~~~~~a~r~~w~L~~~G~~  121 (149)
T d1rhsa1          77 EAGFADYVGSLGISNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHR  121 (149)
T ss_dssp             HHHHHHHHHHTTCCTTCEEEEECCCSSSCSSHHHHHHHHHHTTCC
T ss_pred             hHHHHHHHhhhhccCCceeEEeeccCCcchhhhHHHHHHHHcCCC
Confidence            9999999999999999999999975   57899999999999983

>d1yt8a1 c.46.1.2 (A:107-242) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=2.4e-15  Score=122.91  Aligned_cols=80  Identities=16%  Similarity=0.248  Sum_probs=68.9

Q ss_pred             ccCHHHHHHHhhc-CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          245 IWTLEQVKRNIEE-GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       245 ~i~~~~v~~~~~~-~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      .|+.+++++.++. .+.+|||+|++.||           ..||||||+|+|...+             ...+.+...+++
T Consensus        25 ~Is~~el~~~l~~~~~~~liDvR~~~e~-----------~~ghIpGAi~ip~~~l-------------~~~~~~l~~~~~   80 (136)
T d1yt8a1          25 SLAAEEVQALLDARAEAVILDARRFDEY-----------QTMSIPGGISVPGAEL-------------VLRVAELAPDPR   80 (136)
T ss_dssp             EECHHHHHHHHHTTCSEEEEECSCHHHH-----------HHSBCTTCEECCGGGH-------------HHHHHHHCCSTT
T ss_pred             ccCHHHHHHHHhcCCCcEEEEcCChhhc-----------cceecCCchhhhhhHH-------------HHHhhccccccc
Confidence            5899999998864 46899999999999           7899999999998654             344555556788


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      ++||+||.+|.||..++..|+..||
T Consensus        81 ~~iV~~C~~g~rs~~aa~~L~~~G~  105 (136)
T d1yt8a1          81 TRVIVNCAGRTRSIIGTQSLLNAGI  105 (136)
T ss_dssp             SEEEEECSSSHHHHHHHHHHHHTTC
T ss_pred             ceEEEEcCCCCchHHHHHHHHHcCC
Confidence            8999999999999999999999998

>d1tq1a_ c.46.1.3 (A:) Thiosulfate sulfurtransferase/Senescence-associated protein {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Thiosulfate sulfurtransferase/Senescence-associated protein
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.52  E-value=1.9e-15  Score=120.66  Aligned_cols=89  Identities=15%  Similarity=0.194  Sum_probs=70.7

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .++.++..++++. +.+|||+|++.||           ..||||||+|+|+..+... ......+.++++..  .+++++
T Consensus         9 ~i~~~~a~~l~~~-g~~liDvR~~~e~-----------~~ghi~ga~~ip~~~~~~~-~~~~~~~~~~~~~~--~~~~~~   73 (119)
T d1tq1a_           9 SVSVTVAHDLLLA-GHRYLDVRTPEEF-----------SQGHACGAINVPYMNRGAS-GMSKNTDFLEQVSS--HFGQSD   73 (119)
T ss_dssp             EEEHHHHHHHHHH-TCCEEEESCHHHH-----------HHCCBTTBEECCSCCCSTT-TCCCTTTHHHHHTT--TCCTTS
T ss_pred             ccCHHHHHHHHHC-cCEEEECCCHHHH-----------HcCCCCCccchhhcccccc-cccccHHHHHHHHH--hcCCCc
Confidence            3566777776665 5689999999999           6799999999998765432 23345555665544  478999


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcC
Q 018869          325 PVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +||+||++|.||..++..|.+.||
T Consensus        74 ~iv~~C~~G~rs~~a~~~L~~~G~   97 (119)
T d1tq1a_          74 NIIVGCQSGGRSIKATTDLLHAGF   97 (119)
T ss_dssp             SEEEEESSCSHHHHHHHHHHHHHC
T ss_pred             EEEEEcCCcCcHHHHHHHHHhccc
Confidence            999999999999999999999998

>d1yt8a2 c.46.1.2 (A:6-106) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.51  E-value=1e-14  Score=112.67  Aligned_cols=81  Identities=14%  Similarity=0.166  Sum_probs=67.6

Q ss_pred             ccCHHHHHHHhh-cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCC
Q 018869          245 IWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLE  323 (349)
Q Consensus       245 ~i~~~~v~~~~~-~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~  323 (349)
                      +.|.++|++.+. +++.+|||+|++.||           ..||||||+|+|+..+.             ..+.....+++
T Consensus         3 v~S~~~l~~~l~~~~~~~liDvR~~~e~-----------~~ghIpgAi~~~~~~~~-------------~~~~~~~~~~~   58 (101)
T d1yt8a2           3 VRTFHDIRAALLARRELALLDVREEDPF-----------AQAHPLFAANLPLSRLE-------------LEIHARVPRRD   58 (101)
T ss_dssp             EECHHHHHHHHHHTCCBEEEECSCHHHH-----------TTSBCTTCEECCGGGHH-------------HHHHHHSCCTT
T ss_pred             cCcHHHHHHHHHCCCCeEEEECCCHHHH-----------HhccCCCcccccccchh-------------hhhhhcccccC
Confidence            468899998764 557899999999999           77999999999987642             23344456778


Q ss_pred             CCEEEEcCChHHHHHHHHHHHhCcCC
Q 018869          324 KPVVTACGTGVTACILALVLFPVFFL  349 (349)
Q Consensus       324 ~~vivyC~~G~rA~~~~~~L~~~g~~  349 (349)
                      ++||+||.+|.||..++..|.++||.
T Consensus        59 ~~vv~~~~~g~~s~~~~~~l~~~G~~   84 (101)
T d1yt8a2          59 TPITVYDDGEGLAPVAAQRLHDLGYS   84 (101)
T ss_dssp             SCEEEECSSSSHHHHHHHHHHHTTCS
T ss_pred             ceeeeccchhhhHHHHHHHHHHcCCC
Confidence            99999999999999999999999983

>d1e0ca1 c.46.1.2 (A:1-135) Sulfurtransferase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Sulfurtransferase
species: Azotobacter vinelandii [TaxId: 354]

Probab=99.49  E-value=2e-14  Score=116.40  Aligned_cols=95  Identities=21%  Similarity=0.219  Sum_probs=79.5

Q ss_pred             ccccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCC----CCCCCHHHHHHHHHHc
Q 018869          243 HLIWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS----QTLLPADELKKRFEQE  318 (349)
Q Consensus       243 ~~~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~----~~l~~~~el~~~~~~~  318 (349)
                      .++|+.+|+++++++++.+|||+|+..||           ..||||||+|+|+..+...+    ......+.+...+...
T Consensus         8 p~lIs~~el~~~l~~~~~viiDvR~~~ey-----------~~gHIpgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (135)
T d1e0ca1           8 PLVIEPADLQARLSAPELILVDLTSAARY-----------AEGHIPGARFVDPKRTQLGQPPAPGLQPPREQLESLFGEL   76 (135)
T ss_dssp             CSEECHHHHHTTTTCTTEEEEECSCHHHH-----------HHCBSTTCEECCGGGGSCCCTTCTTSCCCHHHHHHHHHHH
T ss_pred             CcEeeHHHHHHHhcCCCeEEEECCCHHHH-----------hcccCccccccchhhhhhcccccchhhcchhhhhhhhccc
Confidence            35799999999999889999999999999           78999999999999886543    2345667777777777


Q ss_pred             CCCCCCCEEEEcC-ChHHHHHHHHHHHhCcC
Q 018869          319 GISLEKPVVTACG-TGVTACILALVLFPVFF  348 (349)
Q Consensus       319 ~i~~~~~vivyC~-~G~rA~~~~~~L~~~g~  348 (349)
                      ++..+..+|+||. +|.+++.+++.|+.+||
T Consensus        77 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~G~  107 (135)
T d1e0ca1          77 GHRPEAVYVVYDDEGGGWAGRFIWLLDVIGQ  107 (135)
T ss_dssp             TCCTTCEEEEECSSSSHHHHHHHHHHHHTTC
T ss_pred             cccccccccccccccCccchhhHHHHHhccC
Confidence            8888887777765 66888999999999998

>d1okga1 c.46.1.2 (A:7-162) 3-mercaptopyruvate sulfurtransferase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: 3-mercaptopyruvate sulfurtransferase
species: Leishmania major [TaxId: 5664]

Probab=99.49  E-value=1.8e-14  Score=120.03  Aligned_cols=93  Identities=22%  Similarity=0.295  Sum_probs=76.8

Q ss_pred             ccccCHHHHHHHhhcCCceEEeccC--------CCcccccCCCCCCCCCccccCCCcccCcccccCCC-----C--CCCC
Q 018869          243 HLIWTLEQVKRNIEEGTYQLVDARS--------KARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDAS-----Q--TLLP  307 (349)
Q Consensus       243 ~~~i~~~~v~~~~~~~~~~lID~R~--------~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~-----~--~l~~  307 (349)
                      ..+|+.+||.+++++  .+|||+|.        ..+|           ..||||||++++++..+...     +  .+.+
T Consensus         7 ~~lvs~~~L~~~l~d--~~iiD~r~~l~~~~~g~~~Y-----------~~gHIPGA~~~d~~~~l~~~~~~~~~~~~lP~   73 (156)
T d1okga1           7 KVFLDPSEVADHLAE--YRIVDCRYSLKIKDHGSIQY-----------AKEHVKSAIRADVDTNLSKLVPTSTARHPLPP   73 (156)
T ss_dssp             CCEECHHHHTTCGGG--SEEEECCCCSSSTTTTTTHH-----------HHCEETTCEECCTTTTSCCCCTTCCCSSCCCC
T ss_pred             CcEeCHHHHHHhcCC--CEEEEeeccCCCCcchHHHH-----------HHcCCCCCeEcCHHHhcccccCCCCCccccCC
Confidence            458999999998864  89999994        4556           78999999999987655431     1  2558


Q ss_pred             HHHHHHHHHHcCCCCCCCEEEEcCC-h-HHHHHHHHHHHhCcC
Q 018869          308 ADELKKRFEQEGISLEKPVVTACGT-G-VTACILALVLFPVFF  348 (349)
Q Consensus       308 ~~el~~~~~~~~i~~~~~vivyC~~-G-~rA~~~~~~L~~~g~  348 (349)
                      +++|.+.+.+.||+.+++||+||+. | ..|+.+++.|+.+|+
T Consensus        74 ~~~~~~~l~~lGI~~~~~VVvYd~~~g~~~A~R~~w~L~~~G~  116 (156)
T d1okga1          74 CAEFIDWCMANGMAGELPVLCYDDECGAMGGCRLWWMLNSLGA  116 (156)
T ss_dssp             HHHHHHHHHHTTCSSSSCEEEECSSTTTTTHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhccccCCceEEEEeCCCCchHHHHHHHHHHHcCC
Confidence            9999999999999999999999854 3 578999999999885

>d1yt8a3 c.46.1.2 (A:373-529) Thiosulfate sulfurtransferase PA2603 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Multidomain sulfurtransferase (rhodanese)
domain: Thiosulfate sulfurtransferase PA2603
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.43  E-value=3.5e-14  Score=118.65  Aligned_cols=79  Identities=16%  Similarity=0.249  Sum_probs=68.8

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .|+.+++.+++++++.+|||+|+..||           +.||||||+|+|+..+             ...+..  +++++
T Consensus         6 ~Is~~el~~~l~~~~~~ivDvR~~~e~-----------~~ghIpga~~~~~~~~-------------~~~~~~--~~~~~   59 (157)
T d1yt8a3           6 TIDPTTLADWLGEPGTRVLDFTASANY-----------AKRHIPGAAWVLRSQL-------------KQALER--LGTAE   59 (157)
T ss_dssp             EECHHHHHHHTTSTTEEEEECSCHHHH-----------HHCBCTTCEECCGGGH-------------HHHHHH--HCCCS
T ss_pred             EECHHHHHHHHhCCCeEEEEeCCHHHH-----------hhcccccceecccccc-------------cccccc--cccCc
Confidence            589999999998888999999999999           7899999999998654             233332  67889


Q ss_pred             CEEEEcCChHHHHHHHHHHHhCcCC
Q 018869          325 PVVTACGTGVTACILALVLFPVFFL  349 (349)
Q Consensus       325 ~vivyC~~G~rA~~~~~~L~~~g~~  349 (349)
                      +||+||.+|.||+.++..|..+||.
T Consensus        60 ~vv~~c~~g~rs~~~a~~l~~~G~~   84 (157)
T d1yt8a3          60 RYVLTCGSSLLARFAVAEVQALSGK   84 (157)
T ss_dssp             EEEEECSSSHHHHHHHHHHHHHHCS
T ss_pred             ceeeccCCcchHHHHHHHHhcccCc
Confidence            9999999999999999999999883

>d1qxna_ c.46.1.3 (A:) Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud) {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Single-domain sulfurtransferase
domain: Polysulfide-sulfur transferase (sulfide dehydrogenase, Sud)
species: Wolinella succinogenes [TaxId: 844]

Probab=99.40  E-value=7.6e-14  Score=113.97  Aligned_cols=80  Identities=20%  Similarity=0.305  Sum_probs=67.6

Q ss_pred             ccCHHHHHHHhh-cCCceEEeccCCCcccccCCCCCCCCCccc---cCCCcccCcccccCCCCCCCCHHHHHHHHHHcCC
Q 018869          245 IWTLEQVKRNIE-EGTYQLVDARSKARFDGDAPEPRKGIRSGH---VPGSKCIPFPQMLDASQTLLPADELKKRFEQEGI  320 (349)
Q Consensus       245 ~i~~~~v~~~~~-~~~~~lID~R~~~ey~G~~~~~~~~~~~GH---IPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i  320 (349)
                      .||++++.+.++ +++.+|||+|++.||           ..+|   |+||+|+|...+             ...+...++
T Consensus        24 ~Isp~e~~~ll~~~~~~~lIDvR~~~E~-----------~~~hip~i~~a~~ip~~~l-------------~~~~~~~~~   79 (137)
T d1qxna_          24 MLSPKDAYKLLQENPDITLIDVRDPDEL-----------KAMGKPDVKNYKHMSRGKL-------------EPLLAKSGL   79 (137)
T ss_dssp             EECHHHHHHHHHHCTTSEEEECCCHHHH-----------HHTCEECCSSEEECCTTTS-------------HHHHHHHCC
T ss_pred             EEcHHHHHHHHHcCcCEEEEECCcHHHH-----------HHhccccccccccCCcccc-------------ccccccccc
Confidence            689999999986 467999999999999           5666   566788886543             344555678


Q ss_pred             CCCCCEEEEcCChHHHHHHHHHHHhCcC
Q 018869          321 SLEKPVVTACGTGVTACILALVLFPVFF  348 (349)
Q Consensus       321 ~~~~~vivyC~~G~rA~~~~~~L~~~g~  348 (349)
                      +++++||+||.+|.||..++..|..+||
T Consensus        80 ~~~~~ivvyC~~G~rs~~aa~~L~~~G~  107 (137)
T d1qxna_          80 DPEKPVVVFCKTAARAALAGKTLREYGF  107 (137)
T ss_dssp             CTTSCEEEECCSSSCHHHHHHHHHHHTC
T ss_pred             CcccceeeeecccchHHHHHHHHHHcCC
Confidence            9999999999999999999999999998

>d1t3ka_ c.46.1.1 (A:) Dual specificity phosphatase Cdc25 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Dual specificity phosphatase Cdc25
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.17  E-value=1.4e-12  Score=105.52  Aligned_cols=68  Identities=16%  Similarity=0.176  Sum_probs=53.7

Q ss_pred             ccCHHHHHHHhhcCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCC
Q 018869          245 IWTLEQVKRNIEEGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEK  324 (349)
Q Consensus       245 ~i~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~  324 (349)
                      .|+.+++.+.+++++.+|||+|++.||           ..||||||+|+|+..+.+         .+.+++.  .+.+++
T Consensus         9 ~I~~~el~~~~~~~~v~iIDvR~~~e~-----------~~ghIpgAinip~~~~~~---------~~~~~~~--~~~~~~   66 (132)
T d1t3ka_           9 YITSTQLLPLHRRPNIAIIDVRDEERN-----------YDGHIAGSLHYASGSFDD---------KISHLVQ--NVKDKD   66 (132)
T ss_dssp             EECTTTTTTCCCCTTEEEEEESCSHHH-----------HSSCCCSSEEECCSSSST---------THHHHHH--TCCSCC
T ss_pred             EECHHHHHHHHhCCCeEEEEccCHHHH-----------HhccCcccceeeeecccc---------ccccccc--cccccc
Confidence            477788888888888999999999999           789999999999977643         2334444  356788


Q ss_pred             CEEEEcCChH
Q 018869          325 PVVTACGTGV  334 (349)
Q Consensus       325 ~vivyC~~G~  334 (349)
                      ++|+||..|.
T Consensus        67 ~iv~~c~~~~   76 (132)
T d1t3ka_          67 TLVFHSALSQ   76 (132)
T ss_dssp             EEEESSSCCS
T ss_pred             ceEEEecccc
Confidence            9999997543

>d1c25a_ c.46.1.1 (A:) CDC25a {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25a
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.8e-11  Score=102.34  Aligned_cols=78  Identities=12%  Similarity=0.176  Sum_probs=57.9

Q ss_pred             ccCHHHHHHHhhc------CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHc
Q 018869          245 IWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQE  318 (349)
Q Consensus       245 ~i~~~~v~~~~~~------~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~  318 (349)
                      .|+.+++.+++++      ++++|||+|++.||           ..||||||+|+|..+.+            ...+.+.
T Consensus        24 ~Is~~~l~~ll~~~~~~~~~~~~IIDvR~~~Ey-----------~~gHI~gAinip~~~~~------------~~~l~~~   80 (161)
T d1c25a_          24 YISPEIMASVLNGKFANLIKEFVIIDCRYPYEY-----------EGGHIKGAVNLHMEEEV------------EDFLLKK   80 (161)
T ss_dssp             EECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHH------------HHHTTTS
T ss_pred             ccCHHHHHHHHhhhhhcccCCEEEEECCCHHHH-----------HhhhcCCcEEcCcHHHH------------HHHHhhh
Confidence            5899999998864      36899999999999           67999999999975432            2222211


Q ss_pred             ----CCCCCCCEEEEcC-ChHHHHHHHHHHHh
Q 018869          319 ----GISLEKPVVTACG-TGVTACILALVLFP  345 (349)
Q Consensus       319 ----~i~~~~~vivyC~-~G~rA~~~~~~L~~  345 (349)
                          ...++..||+||. +|.|+..++..|+.
T Consensus        81 ~~~~~~~~~~~vV~yc~~s~~rs~~~a~~l~~  112 (161)
T d1c25a_          81 PIVPTDGKRVIVVFHCEFSSERGPRMCRYVRE  112 (161)
T ss_dssp             CCCCCTTSEEEEEEECSSSSSHHHHHHHHHHH
T ss_pred             hhhhhhccCCeEEEEeccccccHHHHHHHHHH
Confidence                1233456899997 78888888877764

>d2gwfa1 c.46.1.4 (A:181-315) Ubiquitin carboxyl-terminal hydrolase 8, USP8 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Ubiquitin carboxyl-terminal hydrolase 8, USP8
domain: Ubiquitin carboxyl-terminal hydrolase 8, USP8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.4e-10  Score=93.46  Aligned_cols=77  Identities=13%  Similarity=0.117  Sum_probs=55.6

Q ss_pred             cCHHHHHHHhhcC--CceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCC--C--CCHHHHHHHHHHcC
Q 018869          246 WTLEQVKRNIEEG--TYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQT--L--LPADELKKRFEQEG  319 (349)
Q Consensus       246 i~~~~v~~~~~~~--~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~--l--~~~~el~~~~~~~~  319 (349)
                      ||++|+.++++++  +.+|||+|+..+|           ..||||||+|||+..+......  +  ......++.+.  .
T Consensus         3 Is~~eL~~~l~~~~~~~liiDvR~~~ey-----------~~~hI~gAinip~~~l~~~~~~~~l~~~~~~~~~~~~~--~   69 (135)
T d2gwfa1           3 ITAKELYTMMTDKNISLIIMDARRMQDY-----------QDSCILHSLSVPEEAISPGVTASWIEAHLPDDSKDTWK--K   69 (135)
T ss_dssp             ECHHHHHHHHHSTTSCEEEEECSCHHHH-----------HHSCBTTCEECCGGGCCTTCCHHHHHHTSCHHHHHHHH--T
T ss_pred             ECHHHHHHHHhcCCCCEEEEEecCCccc-----------cCCccCCeEEeCHHHcccccchhhhhhhhhHHHHHHHh--c
Confidence            7889999998764  4889999999999           6799999999999887543210  0  11123334444  3


Q ss_pred             CCCCCCEEEEcCChHH
Q 018869          320 ISLEKPVVTACGTGVT  335 (349)
Q Consensus       320 i~~~~~vivyC~~G~r  335 (349)
                      ....+.||+||..+..
T Consensus        70 ~~~~~~iV~yd~~s~~   85 (135)
T d2gwfa1          70 RGNVEYVVLLDWFSSA   85 (135)
T ss_dssp             TTTSSEEEEECSSCCG
T ss_pred             cCCCCeEEEEeCCCCc
Confidence            5567899999987643

>d1hzma_ c.46.1.1 (A:) Erk2 binding domain of Mapk phosphatase mkp-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: Erk2 binding domain of Mapk phosphatase mkp-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=3.1e-10  Score=93.55  Aligned_cols=80  Identities=18%  Similarity=0.260  Sum_probs=59.4

Q ss_pred             CccccCHHHHHHHhh--cCCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCC--------CCCCCCHHHH
Q 018869          242 PHLIWTLEQVKRNIE--EGTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDA--------SQTLLPADEL  311 (349)
Q Consensus       242 ~~~~i~~~~v~~~~~--~~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~--------~~~l~~~~el  311 (349)
                      ....+|.+|++++++  +++.+|||+|+..||           ..||||||+|+|+...+..        ...+.+..+.
T Consensus        14 ~~~~~s~e~L~~~l~~~~~~~lilDvR~~~ey-----------~~~HI~gAini~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (154)
T d1hzma_          14 MAISKTVAWLNEQLELGNERLLLMDCRPQELY-----------ESSHIESAINVAIPGIMLRRLQKGNLPVRALFTRGED   82 (154)
T ss_dssp             CSSBSCCCCHHHHHHHCSSSCEEECCSTTHHH-----------HHHTSSSCCCCCCSSHHHHTBCCSCCCTTTTSTTSHH
T ss_pred             ccCccCHHHHHHHHhcCCCCEEEEECCCHHHH-----------hcCCCCCCcccCcHHHHhhhccCCcccccccCCcHHH
Confidence            345688899999885  456899999999999           7899999999998665311        1124455566


Q ss_pred             HHHHHHcCCCCCCCEEEEcCChH
Q 018869          312 KKRFEQEGISLEKPVVTACGTGV  334 (349)
Q Consensus       312 ~~~~~~~~i~~~~~vivyC~~G~  334 (349)
                      ++.+..  ...+++||+||..|.
T Consensus        83 ~~~~~~--~~~~~~VVvYd~~~~  103 (154)
T d1hzma_          83 RDRFTR--RCGTDTVVLYDESSS  103 (154)
T ss_dssp             HHHHHH--STTSSCEEECCCSSS
T ss_pred             HHHHhh--cCCCCeEEEEcCCCc
Confidence            666664  566789999998753

>d1ymka1 c.46.1.1 (A:377-550) CDC25b {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Rhodanese/Cell cycle control phosphatase
superfamily: Rhodanese/Cell cycle control phosphatase
family: Cell cycle control phosphatase, catalytic domain
domain: CDC25b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=2.9e-10  Score=96.03  Aligned_cols=78  Identities=10%  Similarity=0.188  Sum_probs=56.7

Q ss_pred             ccCHHHHHHHhhc------CCceEEeccCCCcccccCCCCCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHH-
Q 018869          245 IWTLEQVKRNIEE------GTYQLVDARSKARFDGDAPEPRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQ-  317 (349)
Q Consensus       245 ~i~~~~v~~~~~~------~~~~lID~R~~~ey~G~~~~~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~-  317 (349)
                      .|+.+++.+++.+      ++++|||+|++.||           ..|||+||+|+|...+..            ..+.. 
T Consensus        24 ~Isp~eL~~ll~~~~~~~~~~~lIID~R~~~Ey-----------~~gHI~gAiNi~~~~~~~------------~~~~~~   80 (174)
T d1ymka1          24 YISPETMVALLTGKFSNIVDKFVIVDCRYPYEY-----------EGGHIKTAVNLPLERDAE------------SFLLKS   80 (174)
T ss_dssp             EECHHHHHHHHTTTTTTTEEEEEEEECSCHHHH-----------HTCEETTCEECCSHHHHH------------HHHHTT
T ss_pred             EeCHHHHHHHHhhhhhcccCCEEEEECCCchhh-----------hhhhcCCccccCchHHHH------------HHHHHh
Confidence            5899999999864      25899999999999           679999999999875431            11111 


Q ss_pred             ----cCCCCCCCEEEEcC-ChHHHHHHHHHHHh
Q 018869          318 ----EGISLEKPVVTACG-TGVTACILALVLFP  345 (349)
Q Consensus       318 ----~~i~~~~~vivyC~-~G~rA~~~~~~L~~  345 (349)
                          ...++.++||+||. ++.|+..++..|+.
T Consensus        81 ~~~~~~~~~~~~vV~yc~~s~~r~~~~a~~l~~  113 (174)
T d1ymka1          81 PIAPCSLDKRVILIFHCEFSSERGPRMCRFIRE  113 (174)
T ss_dssp             TCCC----CEEEEEEECSSSSSHHHHHHHHHHH
T ss_pred             hhhhhhhccCceEEEEeCCCCchHHHHHHHHHH
Confidence                12344567999997 57788777777753

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=89.51  E-value=0.36  Score=38.21  Aligned_cols=48  Identities=17%  Similarity=0.252  Sum_probs=38.3

Q ss_pred             HHHHHHHHcCCCCCCcEEEECCCCcchHHHHHHHHHHcCCCceeEeCCCH
Q 018869          144 AFAAAVSALGLENKDGLVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGL  193 (349)
Q Consensus       144 ~~~~~~~~~gi~~~~~VVvy~~~g~~~a~r~~~~L~~~G~~~V~~L~GG~  193 (349)
                      -|.+.++..++++++.|+|.+.+|  .+.-+...|...|++++.+++=..
T Consensus         4 G~~~~l~~~~~~~~~~vlIlGaGG--aarai~~aL~~~g~~~I~I~nR~~   51 (167)
T d1npya1           4 AIVKLIEKYHLNKNAKVIVHGSGG--MAKAVVAAFKNSGFEKLKIYARNV   51 (167)
T ss_dssp             HHHHHHHHTTCCTTSCEEEECSST--THHHHHHHHHHTTCCCEEEECSCH
T ss_pred             HHHHHHHHcCCCCCCeEEEECCCH--HHHHHHHHHHHCCCCEEEEecccH
Confidence            367788999999999999997655  355567788999999999998543

>d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: (Phosphotyrosine protein) phosphatases II
superfamily: (Phosphotyrosine protein) phosphatases II
family: Dual specificity phosphatase-like
domain: Putative phosphatase At1g05000
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=86.22  E-value=0.47  Score=36.66  Aligned_cols=95  Identities=9%  Similarity=0.055  Sum_probs=46.7

Q ss_pred             CHHHHHHHhhcCCceEEeccCCCcccccCCC-CCCCCCccccCCCcccCcccccCCCCCCCCHHHHHHHHHHcCCCCCCC
Q 018869          247 TLEQVKRNIEEGTYQLVDARSKARFDGDAPE-PRKGIRSGHVPGSKCIPFPQMLDASQTLLPADELKKRFEQEGISLEKP  325 (349)
Q Consensus       247 ~~~~v~~~~~~~~~~lID~R~~~ey~G~~~~-~~~~~~~GHIPGA~~ip~~~l~~~~~~l~~~~el~~~~~~~~i~~~~~  325 (349)
                      +.+++..+.+-+=..|||.|+..|....... ...+.+.-|      +|........ .-...+.+...+...--..+.|
T Consensus        22 t~~~~~~L~~lgIktIidLr~~~e~~~~~~~~~~~gi~~~~------ip~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p   94 (151)
T d1xria_          22 DSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLFQ------FGIEGNKEPF-VNIPDHKIRMALKVLLDEKNHP   94 (151)
T ss_dssp             CHHHHHHHHHHTCSEEEECCSSCCCHHHHHHHHHHTCEEEE------CCCCCCCGGG-CCCCHHHHHHHHHHHHCGGGCS
T ss_pred             CHHHHHHHHHCCCCEEEECCCcchhhcccchhhhcCceEee------cCcccccccc-ccccHHHHHHHHHHHhcCCCCC
Confidence            4455543322233569999998775321000 001112223      3332221111 1123455555554321245679


Q ss_pred             EEEEcCCh-HHHH-HHHHHHHhCcC
Q 018869          326 VVTACGTG-VTAC-ILALVLFPVFF  348 (349)
Q Consensus       326 vivyC~~G-~rA~-~~~~~L~~~g~  348 (349)
                      |+++|..| -|.. +++..|+.+|+
T Consensus        95 vlvHC~~GkdRTG~v~a~~l~~~g~  119 (151)
T d1xria_          95 VLIHCKRGKHRTGCLVGCLRKLQKW  119 (151)
T ss_dssp             EEEECSSSSSHHHHHHHHHHHHTTB
T ss_pred             EEEEcCCCchHHHHHHHHHHHHcCC
Confidence            99999998 3554 45666666675