Citrus Sinensis ID: 018909

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MGCVHGKCCSRYPTSSAADSPQEIYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSNVSV
ccccccccccccccccccccHHHHHHcccccccccccccccccccccccEEEEEEEccccccccccccccEEEEEEcccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEccEEEEEEccccEEEEEEEccccEEEEccccccccccHHHHHHHHHcccEEEEEcccccccccccccccccccccccccEEEEccccccccEEEEEccccccccccEEEccEEEEEEEcccccEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEccccccccc
cccccccccccccccccccHHHHHHHHccccccccccccEEEccccccEEEEEEEEccccccccccccccccEEEEEcccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEEccccEEEEEEcccccccccHHHHHHHHHcccEEEEEccccccccccccccccccccccccccEEEcccccccHHHHHHHcHHHHHHccEEEcccEEEEEEcccccEEEEEccccHEHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccccc
mgcvhgkccsryptssaadspqeIYSLHGkhlltqrslesasvpsynfnleYSVLtqrgyypdspdkenqdsycikthvqgspnvhffgvfdghgqfgtqCSNFVQQRLVEELannpmllddpvkayDSAFLTVNAELhsseiddtmsgtTAITVLVVGDKiyvanvgdsRAVIAVKDGNRiiaedlshdqtpfrkdEYERVKVCGArvlsvdqveglkdpniqtwgdeesqggdpprlwvqngmypgtaftrsvgdstaekigvvavpevsvvqltpnHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLenenrtddITIIIVHIkdfsnvsv
mgcvhgkcCSRYPTSSAADSPQEIYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHsseiddtmsgTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAedlshdqtpfrkdEYERVKVCGarvlsvdqveglkdpniqtwgdeesqggdppRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIkdfsnvsv
MGCVHGKCCSRYPTSSAADSPQEIYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSNVSV
************************YSLHGKHLLT*******SVPSYNFNLEYSVLTQRGYY**********SYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQ*************RLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDF*****
**************************************************EYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFS****
********************PQEIYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSNVSV
************************************SLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDF*****
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MGCVHGKCCSRYPTSSAADSPQEIYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSNVSV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query349 2.2.26 [Sep-21-2011]
Q7XJ53348 Probable protein phosphat yes no 0.982 0.985 0.768 1e-155
Q9SL76 1094 Protein phosphatase 2C an no no 0.856 0.273 0.662 1e-116
Q8H2T0399 Probable protein phosphat no no 0.965 0.844 0.523 3e-94
Q0WRB2373 Probable protein phosphat no no 0.853 0.798 0.272 4e-26
Q8H4S6427 Probable protein phosphat no no 0.805 0.658 0.290 9e-26
Q9XGZ9331 Probable protein phosphat no no 0.584 0.616 0.316 1e-25
Q2R637432 Probable protein phosphat no no 0.733 0.592 0.278 6e-25
Q9M9W9358 Probable protein phosphat no no 0.853 0.832 0.288 2e-24
Q2RBJ6420 Probable protein phosphat no no 0.733 0.609 0.267 2e-24
Q7XR06282 Probable protein phosphat no no 0.750 0.929 0.282 1e-23
>sp|Q7XJ53|P2C35_ARATH Probable protein phosphatase 2C 35 OS=Arabidopsis thaliana GN=At3g06270 PE=2 SV=1 Back     alignment and function desciption
 Score =  546 bits (1408), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 269/350 (76%), Positives = 296/350 (84%), Gaps = 7/350 (2%)

Query: 1   MGCVHGKCCSRYPTSSAADS---PQEIYS-LHGKHLLTQRSLESASVPSYNFNLEYSVLT 56
           MGCV  KCCSRYP+SS+      P E    L GK    Q+ L S  VPS NF++ YSVL+
Sbjct: 1   MGCVQCKCCSRYPSSSSDGDSRGPLEANGVLKGKD---QKPLGSIHVPSPNFDMVYSVLS 57

Query: 57  QRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANN 116
           QRGYYPDSPDKENQD+YCIKT +QG+PNVHFFGVFDGHG  GTQCSNFV++R+VE L+ +
Sbjct: 58  QRGYYPDSPDKENQDTYCIKTELQGNPNVHFFGVFDGHGVLGTQCSNFVKERVVEMLSED 117

Query: 117 PMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAV 176
           P LL+DP KAY SAFL VN ELH SEIDD+MSGTTAITVLVVGDKIYVANVGDSRAV+AV
Sbjct: 118 PTLLEDPEKAYKSAFLRVNEELHDSEIDDSMSGTTAITVLVVGDKIYVANVGDSRAVLAV 177

Query: 177 KDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDP 236
           KD NRI+AEDLS+DQTPFRKDE ERVK CGARVLSVDQVEGLKDPNIQTW +EES+GGDP
Sbjct: 178 KDRNRILAEDLSYDQTPFRKDECERVKACGARVLSVDQVEGLKDPNIQTWANEESEGGDP 237

Query: 237 PRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSS 296
           PRLWVQNGMYPGTAFTRSVGD TAE IGV+A PEVS+V L+PNHLFFVVASDG+FEFL S
Sbjct: 238 PRLWVQNGMYPGTAFTRSVGDFTAESIGVIAEPEVSMVHLSPNHLFFVVASDGIFEFLPS 297

Query: 297 QAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSN 346
           QAVVDM  +Y D RD CAA A ESYKLWLE+ENRTDDITIIIV IK  SN
Sbjct: 298 QAVVDMVGRYADPRDGCAAAAAESYKLWLEHENRTDDITIIIVQIKKLSN 347

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q9SL76|P2C19_ARATH Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana GN=At2g20050 PE=1 SV=2 Back     alignment and function description
>sp|Q8H2T0|P2C65_ORYSJ Probable protein phosphatase 2C 65 OS=Oryza sativa subsp. japonica GN=Os07g0646100 PE=2 SV=1 Back     alignment and function description
>sp|Q0WRB2|P2C73_ARATH Probable protein phosphatase 2C 73 OS=Arabidopsis thaliana GN=PPC6-7 PE=2 SV=1 Back     alignment and function description
>sp|Q8H4S6|P2C64_ORYSJ Probable protein phosphatase 2C 64 OS=Oryza sativa subsp. japonica GN=Os07g0566200 PE=2 SV=2 Back     alignment and function description
>sp|Q9XGZ9|P2C72_ARATH Probable protein phosphatase 2C 72 OS=Arabidopsis thaliana GN=At5g26010 PE=2 SV=2 Back     alignment and function description
>sp|Q2R637|P2C75_ORYSJ Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1 Back     alignment and function description
>sp|Q9M9W9|P2C34_ARATH Probable protein phosphatase 2C 34 OS=Arabidopsis thaliana GN=At3g05640 PE=2 SV=1 Back     alignment and function description
>sp|Q2RBJ6|P2C73_ORYSJ Probable protein phosphatase 2C 73 OS=Oryza sativa subsp. japonica GN=Os11g0109000 PE=2 SV=1 Back     alignment and function description
>sp|Q7XR06|P2C45_ORYSJ Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
255551547433 protein phosphatase 2c, putative [Ricinu 0.991 0.799 0.824 1e-171
224107277376 predicted protein [Populus trichocarpa] 1.0 0.928 0.813 1e-169
225432470349 PREDICTED: probable protein phosphatase 0.994 0.994 0.793 1e-166
356549035431 PREDICTED: probable protein phosphatase 0.991 0.802 0.765 1e-158
356549033427 PREDICTED: probable protein phosphatase 0.991 0.810 0.765 1e-158
449432751429 PREDICTED: probable protein phosphatase 0.979 0.797 0.761 1e-158
356557857431 PREDICTED: probable protein phosphatase 0.991 0.802 0.762 1e-157
224102559422 predicted protein [Populus trichocarpa] 0.974 0.805 0.779 1e-157
449454442351 PREDICTED: probable protein phosphatase 0.991 0.985 0.747 1e-157
357447587443 hypothetical protein MTR_2g020970 [Medic 0.979 0.772 0.771 1e-156
>gi|255551547|ref|XP_002516819.1| protein phosphatase 2c, putative [Ricinus communis] gi|223543907|gb|EEF45433.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  607 bits (1566), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 287/348 (82%), Positives = 314/348 (90%), Gaps = 2/348 (0%)

Query: 1   MGCVHGKCCSRYPTSSAADS--PQEIYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQR 58
           MGCVHGKCCSRYP+SS  DS    E+  L  KH+LTQRSLE   VPS+NF L+YSVLTQR
Sbjct: 1   MGCVHGKCCSRYPSSSDGDSRHQHEVGHLGSKHILTQRSLEIVPVPSHNFKLQYSVLTQR 60

Query: 59  GYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPM 118
           GYYPDSPDKENQDS+CIKT +QG+PN+HFFGVFDGHG +G +CSNFV+ RLVE LAN+PM
Sbjct: 61  GYYPDSPDKENQDSFCIKTQIQGNPNIHFFGVFDGHGLYGAECSNFVKDRLVEILANDPM 120

Query: 119 LLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKD 178
           LL+DPVKAY SAFL  N+ELHSS+IDD+MSGTT+ITVLV+GDKIYVANVGDSRAVI VK+
Sbjct: 121 LLNDPVKAYSSAFLRTNSELHSSKIDDSMSGTTSITVLVIGDKIYVANVGDSRAVIGVKN 180

Query: 179 GNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPR 238
           GNRI+AEDLS+DQTPFRKDEYERVK+CGARVLSVDQVEG KDPNIQTW DEESQGGDPPR
Sbjct: 181 GNRIVAEDLSNDQTPFRKDEYERVKLCGARVLSVDQVEGYKDPNIQTWDDEESQGGDPPR 240

Query: 239 LWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQA 298
           LWV NGMYPGTAFTRSVGDSTAE IGV+A PEVSVVQL PNHLFFVVASDGVFEFLSSQ 
Sbjct: 241 LWVPNGMYPGTAFTRSVGDSTAETIGVIADPEVSVVQLMPNHLFFVVASDGVFEFLSSQT 300

Query: 299 VVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSN 346
           VVDM A+Y D RDACAAIAGESYKLWLE+ENRTDDITIIIVHIK+ SN
Sbjct: 301 VVDMVARYADPRDACAAIAGESYKLWLEHENRTDDITIIIVHIKESSN 348

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224107277|ref|XP_002314431.1| predicted protein [Populus trichocarpa] gi|222863471|gb|EEF00602.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432470|ref|XP_002278973.1| PREDICTED: probable protein phosphatase 2C 35 [Vitis vinifera] gi|147819544|emb|CAN76569.1| hypothetical protein VITISV_030215 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356549035|ref|XP_003542904.1| PREDICTED: probable protein phosphatase 2C 35-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356549033|ref|XP_003542903.1| PREDICTED: probable protein phosphatase 2C 35-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|449432751|ref|XP_004134162.1| PREDICTED: probable protein phosphatase 2C 35-like [Cucumis sativus] gi|449495441|ref|XP_004159842.1| PREDICTED: probable protein phosphatase 2C 35-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356557857|ref|XP_003547227.1| PREDICTED: probable protein phosphatase 2C 35-like [Glycine max] Back     alignment and taxonomy information
>gi|224102559|ref|XP_002312725.1| predicted protein [Populus trichocarpa] gi|222852545|gb|EEE90092.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449454442|ref|XP_004144964.1| PREDICTED: probable protein phosphatase 2C 35-like [Cucumis sativus] gi|449471634|ref|XP_004153367.1| PREDICTED: probable protein phosphatase 2C 35-like [Cucumis sativus] gi|449516667|ref|XP_004165368.1| PREDICTED: probable protein phosphatase 2C 35-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357447587|ref|XP_003594069.1| hypothetical protein MTR_2g020970 [Medicago truncatula] gi|355483117|gb|AES64320.1| hypothetical protein MTR_2g020970 [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
TAIR|locus:2082465348 AT3G06270 [Arabidopsis thalian 0.982 0.985 0.774 3.7e-142
TAIR|locus:2061673 1094 AT2G20050 [Arabidopsis thalian 0.856 0.273 0.662 4.5e-107
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.429 0.482 0.368 2.7e-25
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.472 0.466 0.325 1.5e-24
TAIR|locus:2143325373 AT5G27930 [Arabidopsis thalian 0.318 0.297 0.401 7.4e-24
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.415 0.324 0.361 7.6e-23
TAIR|locus:2019868504 AT1G79630 [Arabidopsis thalian 0.309 0.214 0.3 2.8e-22
TAIR|locus:2183612448 PP2C74 "AT5G36250" [Arabidopsi 0.312 0.243 0.297 2.2e-21
TAIR|locus:2020863462 AT1G03590 [Arabidopsis thalian 0.263 0.199 0.368 5.6e-21
TAIR|locus:2032880 491 AT1G16220 [Arabidopsis thalian 0.306 0.217 0.297 2e-20
TAIR|locus:2082465 AT3G06270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
 Identities = 271/350 (77%), Positives = 298/350 (85%)

Query:     1 MGCVHGKCCSRYPTSSA-ADS--PQEIYS-LHGKHLLTQRSLESASVPSYNFNLEYSVLT 56
             MGCV  KCCSRYP+SS+  DS  P E    L GK    Q+ L S  VPS NF++ YSVL+
Sbjct:     1 MGCVQCKCCSRYPSSSSDGDSRGPLEANGVLKGKD---QKPLGSIHVPSPNFDMVYSVLS 57

Query:    57 QRGYYPDSPDKENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANN 116
             QRGYYPDSPDKENQD+YCIKT +QG+PNVHFFGVFDGHG  GTQCSNFV++R+VE L+ +
Sbjct:    58 QRGYYPDSPDKENQDTYCIKTELQGNPNVHFFGVFDGHGVLGTQCSNFVKERVVEMLSED 117

Query:   117 PMLLDDPVKAYDSAFLTVNAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAV 176
             P LL+DP KAY SAFL VN ELH SEIDD+MSGTTAITVLVVGDKIYVANVGDSRAV+AV
Sbjct:   118 PTLLEDPEKAYKSAFLRVNEELHDSEIDDSMSGTTAITVLVVGDKIYVANVGDSRAVLAV 177

Query:   177 KDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDP 236
             KD NRI+AEDLS+DQTPFRKDE ERVK CGARVLSVDQVEGLKDPNIQTW +EES+GGDP
Sbjct:   178 KDRNRILAEDLSYDQTPFRKDECERVKACGARVLSVDQVEGLKDPNIQTWANEESEGGDP 237

Query:   237 PRLWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSS 296
             PRLWVQNGMYPGTAFTRSVGD TAE IGV+A PEVS+V L+PNHLFFVVASDG+FEFL S
Sbjct:   238 PRLWVQNGMYPGTAFTRSVGDFTAESIGVIAEPEVSMVHLSPNHLFFVVASDGIFEFLPS 297

Query:   297 QAVVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSN 346
             QAVVDM  +Y D RD CAA A ESYKLWLE+ENRTDDITIIIV IK  SN
Sbjct:   298 QAVVDMVGRYADPRDGCAAAAAESYKLWLEHENRTDDITIIIVQIKKLSN 347
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005634 "nucleus" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2061673 AT2G20050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2143325 AT5G27930 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2019868 AT1G79630 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183612 PP2C74 "AT5G36250" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020863 AT1G03590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032880 AT1G16220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q7XJ53P2C35_ARATH3, ., 1, ., 3, ., 1, 60.76850.98280.9856yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.X.4239.1
hypothetical protein (351 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 2e-56
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 4e-49
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 6e-35
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 3e-29
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 1e-18
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 2e-17
pfam13672211 pfam13672, PP2C_2, Protein phosphatase 2C 0.001
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  184 bits (468), Expect = 2e-56
 Identities = 96/283 (33%), Positives = 134/283 (47%), Gaps = 49/283 (17%)

Query: 67  KENQDSYCIKTHVQGSPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPM-----LLD 121
           K N+D+  IK +   + +   FGVFDGHG  G     F  + LVEEL            +
Sbjct: 13  KTNEDAVVIKPN-LNNEDGGLFGVFDGHG--GHAAGEFASKLLVEELLEELEETLTLSEE 69

Query: 122 DPVKAYDSAFLTVNAELHS---SEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKD 178
           D  +A   AFL  + E+      E DD  SGTTA+  L+ G+K+YVANVGDSRAV+    
Sbjct: 70  DIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNG 129

Query: 179 GNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPR 238
                A  L+ D  P  ++E ER++  G RV                     S G  P  
Sbjct: 130 E----AVQLTKDHKPVNEEERERIEKAGGRV---------------------SNGRVPGV 164

Query: 239 LWVQNGMYPGTAFTRSVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQA 298
           L          A TR++GD    K GV A P+V+VV+LT +  F ++ASDG+++ LS+Q 
Sbjct: 165 L----------AVTRALGDFDL-KPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQE 213

Query: 299 VVDMAAKYTDARDACAAIAGESYKLWLENENRTDDITIIIVHI 341
            VD+        D     A E   L L      D+IT+++V +
Sbjct: 214 AVDIVRSELAKEDL-QEAAQELVDLALRR-GSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|222308 pfam13672, PP2C_2, Protein phosphatase 2C Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 349
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.94
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.94
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.84
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.81
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.76
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.63
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.53
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.61
PRK10693303 response regulator of RpoS; Provisional 87.96
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.6e-48  Score=365.31  Aligned_cols=251  Identities=27%  Similarity=0.450  Sum_probs=211.8

Q ss_pred             eeEEEEeeccccCCCCCCCCCcceeeeeccccC--------CCCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCCCCC
Q 018909           49 NLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQG--------SPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNPMLL  120 (349)
Q Consensus        49 ~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~--------~~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~~~~  120 (349)
                      .+.++..|++|.     |+.|||++++..++..        .....||+||||||  |+.+++++++.|++.+.+...+.
T Consensus        64 ~~~~~~~s~~G~-----R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhG--G~~age~as~~l~~~i~~~~~~~  136 (365)
T PLN03145         64 VVRSGAWADIGS-----RSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHG--GKHAADFACYHLPRFIVEDEDFP  136 (365)
T ss_pred             ceEEEEEccccC-----CCCCCCceEecccccccccccccCCCCceEEEEEeCCC--CHHHHHHHHHHHHHHHHhhhccc
Confidence            467899999997     9999999987654421        22468999999999  99999999999999988766565


Q ss_pred             CcHHHHHHHHHHHHhHHHhhc--CCCCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeCCCCCCCCChhH
Q 018909          121 DDPVKAYDSAFLTVNAELHSS--EIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDE  198 (349)
Q Consensus       121 ~~~~~~l~~a~~~~~~~l~~~--~~~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e  198 (349)
                      .++.++|.++|..+++.+.+.  ......+|||++++++.++++|++||||||+|+++.+.    .++||.||++.++.|
T Consensus       137 ~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~----~~~LT~DH~~~~~~E  212 (365)
T PLN03145        137 REIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGK----AIEMSRDHKPMCSKE  212 (365)
T ss_pred             hhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCe----EEEecCCCCCCCHHH
Confidence            677889999999999998762  12233589999999999999999999999999997654    588999999999999


Q ss_pred             HHHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ccccccCCCcccccC------ceEecceE
Q 018909          199 YERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEKI------GVVAVPEV  271 (349)
Q Consensus       199 ~~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g-~~ltr~lG~~~~k~~------~v~~~p~v  271 (349)
                      ++||++.||.+..                                ++++| +++||+|||..+|..      +++++|++
T Consensus       213 ~~RI~~~Gg~v~~--------------------------------g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv  260 (365)
T PLN03145        213 RKRIEASGGYVYD--------------------------------GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPEL  260 (365)
T ss_pred             HHHHHHcCCceec--------------------------------ceECCccccccccccccccccccccCCCcceEEEE
Confidence            9999999998732                                12222 579999999877542      47899999


Q ss_pred             EEEEcCCCCeEEEEEcCCcccccCHHHHHHHHH----ccCCHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCCCC
Q 018909          272 SVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAA----KYTDARDACAAIAGESYKLWLENENRTDDITIIIVHIKDFSNV  347 (349)
Q Consensus       272 ~~~~l~~~d~fLiL~SDGl~d~l~~~ei~~iv~----~~~~~~~~a~~L~~~a~~~~~~~~g~~DNiTvIvv~~~~~~~~  347 (349)
                      ..+++.++|.|||||||||||+|+++++++++.    ...+|+++|+.|++.|++     +++.||+|||||+|+..++.
T Consensus       261 ~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~Al~-----rgs~DNITvIVV~l~~~~~~  335 (365)
T PLN03145        261 MTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEALK-----RKSGDNLAVVVVCFQSQPPP  335 (365)
T ss_pred             EEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHh-----CCCCCCEEEEEEEeecCCCc
Confidence            999999999999999999999999999876664    345899999999999999     79999999999999975543

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-20
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 5e-20
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-19
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-18
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 4e-16
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 5e-16
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-15
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 1e-15
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 1e-15
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 1e-15
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 1e-15
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 2e-15
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 3e-13
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 1e-11
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 3e-09
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 5e-09
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 6e-08
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 3e-07
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 9e-07
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 1e-06
2pom_A372 Tab1 With Manganese Ion Length = 372 7e-05
2j4o_A401 Structure Of Tab1 Length = 401 1e-04
2xzv_A240 The Cyanobacterial Pp2c-Like Phosphatase Tppha Requ 6e-04
2j82_A240 Structural Analysis Of The Pp2c Family Phosphatase 6e-04
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure 
Iteration: 1

 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 48/259 (18%)
Query: 86  HFFGVFDGHGQFGTQCSNFVQQR----LVEELAN-NPMLLDDPV------KAYDSAFLTV 134
           HFFGV+DGHG  G+Q +N+ ++R    L EE+A   PML D         KA  ++FL V
Sbjct: 56  HFFGVYDGHG--GSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRV 113
Query: 135 NAELHSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPF 194
           ++E+ S  +     G+T++  +V    I+VAN GDSRAV+         A  LS D  P 
Sbjct: 114 DSEIES--VAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGK----TALPLSVDHKPD 167
Query: 195 RKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRS 254
           R+DE  R++  G +V+                             W    ++   A +RS
Sbjct: 168 REDEAARIEAAGGKVIQ----------------------------WNGARVFGVLAMSRS 199
Query: 255 VGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACA 314
           +GD    K  ++  PEV+ V+        ++ASDGV++ ++ +   +MA K         
Sbjct: 200 IGDRYL-KPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWHKKN 258
Query: 315 AIAGESYKLWLENENRTDD 333
           A+AG++  L  E      D
Sbjct: 259 AVAGDASLLADERRKEGKD 277
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2XZV|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires Three Metals In The Catalytic Center For Efficient Catalysis Length = 240 Back     alignment and structure
>pdb|2J82|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha From Thermosynechococcus Elongatus Length = 240 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 8e-84
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-56
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 5e-55
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 3e-52
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-50
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-50
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 5e-50
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-49
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 1e-46
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 4e-44
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-41
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 5e-34
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 2e-30
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-10
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-09
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 5e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 2e-06
3rnr_A211 Stage II sporulation E family protein; structural 3e-05
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  256 bits (655), Expect = 8e-84
 Identities = 68/330 (20%), Positives = 130/330 (39%), Gaps = 41/330 (12%)

Query: 37  SLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTH-VQGSPNVHFFGVFDGHG 95
           ++     P+     + ++ T  G       K  +D + +    V G  +  FFGVFDG  
Sbjct: 9   TIHVPLPPTSYPAFDAAIFTDIG-----GRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTV 63

Query: 96  QFGTQCSNFVQQRLVEELANNP--------------------MLLDDPVKAYDSAFLTVN 135
             G   S  V+  +V +L ++P                     L     +A D  +   +
Sbjct: 64  --GDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPATEVDEKLPQLLDQAVDDMYKNAD 121

Query: 136 AEL--HSSEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTP 193
            EL     +++   + +T++T ++    + V ++GDSR  + V+  N +  E L+ D  P
Sbjct: 122 NELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTVDHKP 181

Query: 194 FRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTR 253
               E  R+   G  V                      +GGD      +        ++R
Sbjct: 182 DMPHEKLRIMRNGGSV-EYLHNHN---------NKPFIRGGDFSFRKSRGEQPMQLQYSR 231

Query: 254 SVGDSTAEKIGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAK-YTDARDA 312
           + G    +  G+   P+V VV++TP H   ++A+DG+++ +S+   V++A +   + R+ 
Sbjct: 232 AFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGRNP 291

Query: 313 CAAIAGESYKLWLENENRTDDITIIIVHIK 342
             A+   +           D+IT + V  K
Sbjct: 292 AQALVEMTLAEQQSRNQSADNITAMTVFFK 321
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query349
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.87
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.84
3f79_A255 Probable two-component response regulator; adaptor 99.73
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.72
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.33
3eq2_A394 Probable two-component response regulator; adaptor 98.63
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=1.4e-48  Score=363.46  Aligned_cols=270  Identities=22%  Similarity=0.381  Sum_probs=217.0

Q ss_pred             ccccccCCCccccCCcceeeccCCCeeeEEEEeeccccCCCCCCCCCcceeeeeccccC-CCCeEEEEEEcCCCcCcHHH
Q 018909           23 EIYSLHGKHLLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQG-SPNVHFFGVFDGHGQFGTQC  101 (349)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~-~~~~~~~~V~DG~Gg~G~~a  101 (349)
                      .||....+|...+.     .....+..+.|+++|++|+     |+.|||++++...+.. ..+..+|+||||||  |..+
T Consensus         2 ~mg~~l~~p~~~~~-----~~~~~~~~~~~~~~s~~G~-----R~~nED~~~~~~~~~~~~~~~~l~~V~DGhG--G~~~   69 (307)
T 2p8e_A            2 SLGAFLDKPKTEKH-----NAHGAGNGLRYGLSSMQGW-----RVEMEDAHTAVVGIPHGLEDWSFFAVYDGHA--GSRV   69 (307)
T ss_dssp             ----CCSSCEEEEE-----EEEEEETTEEEEEEEEEET-----SSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHH
T ss_pred             CcccccCCCccccc-----cccCCCCCeeEEEEecCCC-----CCcccceEEEEecCCCCCCCeEEEEEECCCC--CHHH
Confidence            37777777764433     2223346788999999998     9999999988654321 13578999999999  9999


Q ss_pred             HHHHHHHHHHHHhcCCCCC-------------CcHHHHHHHHHHHHhHHHhhcC---CCCCCCCceEEEEEEeCCEEEEE
Q 018909          102 SNFVQQRLVEELANNPMLL-------------DDPVKAYDSAFLTVNAELHSSE---IDDTMSGTTAITVLVVGDKIYVA  165 (349)
Q Consensus       102 s~~a~~~l~~~~~~~~~~~-------------~~~~~~l~~a~~~~~~~l~~~~---~~~~~~GtT~~~~~i~~~~l~ia  165 (349)
                      ++++++.+.+.+.+...+.             .++.++|+++|..+++.|.+..   .....+|||++++++.++++|++
T Consensus        70 a~~as~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~va  149 (307)
T 2p8e_A           70 ANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFI  149 (307)
T ss_dssp             HHHHHHHHHHHHHTSTTTC-----------CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEE
T ss_pred             HHHHHHHHHHHHHhhHhhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEE
Confidence            9999999999887643222             2457889999999999998732   22356899999999999999999


Q ss_pred             EeccccEEEEEecCCeEEEEeCCCCCCCCChhHHHHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCc
Q 018909          166 NVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGM  245 (349)
Q Consensus       166 nvGDSr~~l~~~~~~~~~~~~ls~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~  245 (349)
                      ||||||+|+++.+.    .++||.||++.++.|++||..+||.+..                                .+
T Consensus       150 nvGDSRa~l~r~g~----~~~lT~DH~~~~~~E~~rI~~~gg~v~~--------------------------------~r  193 (307)
T 2p8e_A          150 NCGDSRAVLYRNGQ----VCFSTQDHKPCNPREKERIQNAGGSVMI--------------------------------QR  193 (307)
T ss_dssp             EESSCEEEEEETTE----EEEECCCCCTTSHHHHHHHHHTTCCEET--------------------------------TE
T ss_pred             EccCcEEEEEECCc----cccCCCCCCCCCHHHHHHHHHcCCEEEe--------------------------------Cc
Confidence            99999999997654    5899999999999999999999987731                                12


Q ss_pred             cCc-ccccccCCCccccc--------CceEecceEEEEEcCCCCeEEEEEcCCcccccCHHHHHHHHHc----cCCHHHH
Q 018909          246 YPG-TAFTRSVGDSTAEK--------IGVVAVPEVSVVQLTPNHLFFVVASDGVFEFLSSQAVVDMAAK----YTDARDA  312 (349)
Q Consensus       246 ~~g-~~ltr~lG~~~~k~--------~~v~~~p~v~~~~l~~~d~fLiL~SDGl~d~l~~~ei~~iv~~----~~~~~~~  312 (349)
                      +.| +.+||+||+..+|.        +.++++|++..+++.++|.|||||||||||+|+++++.+++..    ..+++++
T Consensus       194 v~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~~~~~~~  273 (307)
T 2p8e_A          194 VNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENV  273 (307)
T ss_dssp             ETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHH
T ss_pred             ccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHHHHHHhcCCCHHHH
Confidence            222 68999999998774        3478999999999999998999999999999999999999986    4689999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCeEEEEEEcCCCC
Q 018909          313 CAAIAGESYKLWLENENRTDDITIIIVHIKDFS  345 (349)
Q Consensus       313 a~~L~~~a~~~~~~~~g~~DNiTvIvv~~~~~~  345 (349)
                      |+.|++.|+.     +|+.||||||||++...+
T Consensus       274 a~~Lv~~A~~-----~g~~DNiTvivv~~~~~~  301 (307)
T 2p8e_A          274 CNWVVDTCLH-----KGSRDNMSIVLVCFSNEG  301 (307)
T ss_dssp             HHHHHHHHHH-----TTCCSCEEEEEEEC----
T ss_pred             HHHHHHHHHH-----cCCCCCeEEEEEECCCCC
Confidence            9999999998     899999999999997654
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 349
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 4e-27
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 6e-15
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 4e-27
 Identities = 59/325 (18%), Positives = 117/325 (36%), Gaps = 48/325 (14%)

Query: 32  LLTQRSLESASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTH-VQGSPNVHFFGV 90
            L +  +E  +       L Y + + +G+       E +D++        G  +  FF V
Sbjct: 3   FLDKPKMEKHNAQGQGNGLRYGLSSMQGWRV-----EMEDAHTAVIGLPSGLESWSFFAV 57

Query: 91  FDGHGQFGTQCSNFVQQRLVEELANNPML--------LDDPVKAYDSAFLTVNAELHS-- 140
           +DGH   G+Q + +  + L++ + NN           +++      + FL ++  +    
Sbjct: 58  YDGHA--GSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMS 115

Query: 141 -SEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDLSHDQTPFRKDEY 199
             +     SG+TA+ VL+     Y  N GDSR ++             + D  P    E 
Sbjct: 116 EKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLL----CRNRKVHFFTQDHKPSNPLEK 171

Query: 200 ERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPGTAFTRSVGDST 259
           ER                     IQ  G           L V   +  G    + V    
Sbjct: 172 ER---------------------IQNAGGSVMIQRVNGSLAVSRAL--GDFDYKCVHGKG 208

Query: 260 AEKIGVVAVPEVSVVQLT-PNHLFFVVASDGVFEFLSSQAVVDMAAKYTDARDACAAIAG 318
             +  V   PEV  ++ +  +  F ++A DG+++ + ++ + D      +  D    +  
Sbjct: 209 PTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCN 268

Query: 319 ESYKLWLENENRTDDITIIIVHIKD 343
           E     L      D++++I++   +
Sbjct: 269 EVVDTCLYK-GSRDNMSVILICFPN 292
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query349
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-50  Score=373.18  Aligned_cols=259  Identities=21%  Similarity=0.414  Sum_probs=217.3

Q ss_pred             eeeccCCCeeeEEEEeeccccCCCCCCCCCcceeeeeccccC-CCCeEEEEEEcCCCcCcHHHHHHHHHHHHHHHhcCC-
Q 018909           40 SASVPSYNFNLEYSVLTQRGYYPDSPDKENQDSYCIKTHVQG-SPNVHFFGVFDGHGQFGTQCSNFVQQRLVEELANNP-  117 (349)
Q Consensus        40 ~~~~~~~~~~~~~~~~s~~G~~~~~~r~~nED~~~v~~~~~~-~~~~~~~~V~DG~Gg~G~~as~~a~~~l~~~~~~~~-  117 (349)
                      +......+.++.||++|++|+     |+.|||++.+..++.. .+++.|||||||||  |..||+++++.|++.+.+.. 
T Consensus        11 k~~~~~~~~~~~~g~~s~~G~-----R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhG--G~~~s~~~~~~l~~~l~~~~~   83 (295)
T d1a6qa2          11 KHNAQGQGNGLRYGLSSMQGW-----RVEMEDAHTAVIGLPSGLESWSFFAVYDGHA--GSQVAKYCCEHLLDHITNNQD   83 (295)
T ss_dssp             EEEEEEEETTEEEEEEEEEET-----SSSCCEEEEEEEEETTTEEEEEEEEEEEEES--CSHHHHHHHHHHHHHHHTSHH
T ss_pred             cCcccccCCceEEEEEeCccC-----CCcccCeeEEEcccCCCCCceEEEEEEeCCC--ChHHHHHHHHHHHHHHHHhhh
Confidence            344444556789999999998     9999999988765532 35678999999999  99999999999999886532 


Q ss_pred             -------CCCCcHHHHHHHHHHHHhHHHhh---cCCCCCCCCceEEEEEEeCCEEEEEEeccccEEEEEecCCeEEEEeC
Q 018909          118 -------MLLDDPVKAYDSAFLTVNAELHS---SEIDDTMSGTTAITVLVVGDKIYVANVGDSRAVIAVKDGNRIIAEDL  187 (349)
Q Consensus       118 -------~~~~~~~~~l~~a~~~~~~~l~~---~~~~~~~~GtT~~~~~i~~~~l~ianvGDSr~~l~~~~~~~~~~~~l  187 (349)
                             ...+++.++|+++|..+++.+..   .......+|||++++++.++++|++||||||+|+++.+.    .++|
T Consensus        84 ~~~~~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~----~~~l  159 (295)
T d1a6qa2          84 FKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRK----VHFF  159 (295)
T ss_dssp             HHCSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTE----EEEE
T ss_pred             hccccccchHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeeccc----ceee
Confidence                   12235678899999999988864   344456789999999999999999999999999997554    5899


Q ss_pred             CCCCCCCChhHHHHHHHcCCEEEeeccccCCCCCCCCCCCCCccCCCCCCeeeeecCccCc-ccccccCCCccccc----
Q 018909          188 SHDQTPFRKDEYERVKVCGARVLSVDQVEGLKDPNIQTWGDEESQGGDPPRLWVQNGMYPG-TAFTRSVGDSTAEK----  262 (349)
Q Consensus       188 s~dh~~~~~~e~~ri~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~p~r~~~~~~~~~g-~~ltr~lG~~~~k~----  262 (349)
                      |.||++.++.|++||++.||.+..                                .+++| +++||+|||..+|.    
T Consensus       160 T~dH~~~~~~E~~Ri~~~gg~v~~--------------------------------~r~~g~l~~tRa~Gd~~~k~~~~~  207 (295)
T d1a6qa2         160 TQDHKPSNPLEKERIQNAGGSVMI--------------------------------QRVNGSLAVSRALGDFDYKCVHGK  207 (295)
T ss_dssp             CCCCCTTSHHHHHHHHHTTCCEET--------------------------------TEETTTBSCSBCEECGGGSCCTTC
T ss_pred             ccccCcccHHHHhhHhhcCCcccc--------------------------------cccCCceeeeeccCcHHhhhcccc
Confidence            999999999999999999998742                                11222 78999999998874    


Q ss_pred             ----CceEecceEEEEEcC-CCCeEEEEEcCCcccccCHHHHHHHHHc----cCCHHHHHHHHHHHHHHHHHhcCCCCCC
Q 018909          263 ----IGVVAVPEVSVVQLT-PNHLFFVVASDGVFEFLSSQAVVDMAAK----YTDARDACAAIAGESYKLWLENENRTDD  333 (349)
Q Consensus       263 ----~~v~~~p~v~~~~l~-~~d~fLiL~SDGl~d~l~~~ei~~iv~~----~~~~~~~a~~L~~~a~~~~~~~~g~~DN  333 (349)
                          +.++++|++..+++. ++|.|||||||||||+|+++|++++++.    ..+++.+|+.|++.|+.     +++.||
T Consensus       208 ~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~-----~gs~DN  282 (295)
T d1a6qa2         208 GPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY-----KGSRDN  282 (295)
T ss_dssp             CGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH-----TTCCSC
T ss_pred             CcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh-----cCCCCC
Confidence                349999999999986 4577999999999999999999999865    35899999999999998     899999


Q ss_pred             eEEEEEEcCCCCC
Q 018909          334 ITIIIVHIKDFSN  346 (349)
Q Consensus       334 iTvIvv~~~~~~~  346 (349)
                      ||||||+|++.++
T Consensus       283 iTvivv~~~~~~k  295 (295)
T d1a6qa2         283 MSVILICFPNAPK  295 (295)
T ss_dssp             EEEEEEECTTSCC
T ss_pred             eEEEEEeccCCCc
Confidence            9999999998764
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure